Query 039428
Match_columns 335
No_of_seqs 214 out of 1969
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 16:20:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039428.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039428hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p9w_A MAL S 1 allergenic prot 100.0 1.2E-28 4E-33 224.0 23.6 276 39-332 3-320 (334)
2 3g4e_A Regucalcin; six bladed 99.9 4E-25 1.4E-29 200.6 28.1 254 42-335 6-280 (297)
3 2fp8_A Strictosidine synthase; 99.9 5.6E-24 1.9E-28 195.1 29.1 249 37-317 7-302 (322)
4 2p4o_A Hypothetical protein; p 99.9 5.8E-23 2E-27 187.3 28.3 242 48-320 31-281 (306)
5 3e5z_A Putative gluconolactona 99.9 1.7E-21 5.9E-26 175.8 31.7 238 36-316 15-276 (296)
6 3fvz_A Peptidyl-glycine alpha- 99.9 6.9E-22 2.4E-26 181.8 26.9 247 49-317 24-311 (329)
7 1q7f_A NHL, brain tumor CG1071 99.9 6.6E-21 2.3E-25 170.8 30.6 234 49-315 30-268 (286)
8 1npe_A Nidogen, entactin; glyc 99.9 6E-21 2E-25 170.1 27.7 219 49-307 36-259 (267)
9 1ijq_A LDL receptor, low-densi 99.9 7.2E-21 2.5E-25 174.5 28.1 230 25-283 5-239 (316)
10 3v64_C Agrin; beta propeller, 99.9 4.2E-21 1.4E-25 178.6 26.8 240 27-306 50-294 (349)
11 1rwi_B Serine/threonine-protei 99.9 3.2E-21 1.1E-25 170.9 24.6 227 50-317 25-253 (270)
12 3dr2_A Exported gluconolactona 99.9 8.8E-21 3E-25 172.4 28.0 230 43-316 39-296 (305)
13 3v65_B Low-density lipoprotein 99.9 5.8E-21 2E-25 180.0 25.8 241 27-307 93-338 (386)
14 3hrp_A Uncharacterized protein 99.9 3.9E-20 1.3E-24 175.6 31.6 242 50-317 132-399 (409)
15 3hrp_A Uncharacterized protein 99.9 2.2E-20 7.7E-25 177.3 28.2 245 20-279 132-407 (409)
16 2qe8_A Uncharacterized protein 99.9 3.1E-20 1.1E-24 171.9 27.4 250 49-316 17-309 (343)
17 2qc5_A Streptogramin B lactona 99.9 2.5E-19 8.4E-24 160.4 31.0 244 34-317 5-249 (300)
18 3sre_A PON1, serum paraoxonase 99.9 1.8E-19 6E-24 167.0 30.1 246 48-317 49-347 (355)
19 4hw6_A Hypothetical protein, I 99.9 6.7E-20 2.3E-24 175.2 27.6 238 49-317 139-422 (433)
20 1rwi_B Serine/threonine-protei 99.9 2.4E-20 8.2E-25 165.2 21.8 226 20-281 25-263 (270)
21 2qc5_A Streptogramin B lactona 99.9 4E-19 1.4E-23 159.1 29.7 227 49-316 62-290 (300)
22 2ghs_A AGR_C_1268P; regucalcin 99.9 2.1E-19 7.3E-24 165.1 27.5 232 45-317 45-292 (326)
23 3sov_A LRP-6, low-density lipo 99.9 4.7E-20 1.6E-24 169.3 22.8 225 25-283 8-239 (318)
24 2z2n_A Virginiamycin B lyase; 99.9 1.5E-18 5.3E-23 155.2 31.9 234 42-316 8-243 (299)
25 1pjx_A Dfpase, DIISOPROPYLFLUO 99.9 4.4E-19 1.5E-23 160.4 27.5 251 32-317 3-288 (314)
26 3p5b_L Low density lipoprotein 99.9 3.3E-19 1.1E-23 168.7 27.6 248 25-306 87-339 (400)
27 3fvz_A Peptidyl-glycine alpha- 99.8 1.6E-19 5.5E-24 165.9 22.6 216 49-280 91-320 (329)
28 3v65_B Low-density lipoprotein 99.8 6.7E-19 2.3E-23 165.9 26.8 210 69-318 95-308 (386)
29 3v64_C Agrin; beta propeller, 99.8 7E-19 2.4E-23 163.5 26.5 222 55-318 40-265 (349)
30 2z2n_A Virginiamycin B lyase; 99.8 7.9E-18 2.7E-22 150.5 32.5 228 48-316 56-284 (299)
31 3tc9_A Hypothetical hydrolase; 99.8 5.9E-19 2E-23 168.6 26.3 240 49-317 137-419 (430)
32 2dg1_A DRP35, lactonase; beta 99.8 1.3E-18 4.5E-23 159.0 26.9 241 44-317 40-300 (333)
33 1q7f_A NHL, brain tumor CG1071 99.8 8.8E-19 3E-23 156.9 24.9 200 49-281 77-279 (286)
34 4hw6_A Hypothetical protein, I 99.8 4E-19 1.4E-23 169.8 22.8 238 20-280 140-431 (433)
35 1npe_A Nidogen, entactin; glyc 99.8 2E-18 6.9E-23 153.7 25.9 221 62-318 3-228 (267)
36 3tc9_A Hypothetical hydrolase; 99.8 7.3E-19 2.5E-23 167.9 24.3 238 20-280 138-428 (430)
37 1n7d_A LDL receptor, low-densi 99.8 1.8E-19 6.2E-24 181.9 20.2 248 25-306 381-633 (699)
38 3kya_A Putative phosphatase; s 99.8 4E-18 1.4E-22 163.9 27.3 249 50-317 140-464 (496)
39 1ijq_A LDL receptor, low-densi 99.8 1.1E-17 3.8E-22 153.2 29.0 211 69-317 9-227 (316)
40 3m0c_C LDL receptor, low-densi 99.8 5.3E-18 1.8E-22 172.6 28.7 229 26-283 400-633 (791)
41 3p5b_L Low density lipoprotein 99.8 1.7E-17 5.7E-22 157.0 28.2 213 68-318 90-310 (400)
42 3dsm_A Uncharacterized protein 99.8 2E-18 6.7E-23 158.8 21.2 236 30-307 64-320 (328)
43 3s94_A LRP-6, low-density lipo 99.8 5.4E-18 1.8E-22 168.8 25.5 223 27-283 15-244 (619)
44 3a9g_A Putative uncharacterize 99.8 2.7E-17 9.2E-22 153.1 28.1 259 46-322 26-338 (354)
45 4a0p_A LRP6, LRP-6, low-densit 99.8 2.2E-17 7.5E-22 164.6 26.7 198 49-283 37-238 (628)
46 2ism_A Putative oxidoreductase 99.8 5.8E-17 2E-21 150.7 27.5 257 47-322 29-341 (352)
47 3sov_A LRP-6, low-density lipo 99.8 2.7E-17 9.3E-22 150.8 24.0 211 69-317 12-227 (318)
48 3dsm_A Uncharacterized protein 99.8 1.3E-16 4.4E-21 146.6 27.8 247 29-315 16-285 (328)
49 2fp8_A Strictosidine synthase; 99.8 3E-17 1E-21 150.1 23.4 202 50-281 81-312 (322)
50 3s94_A LRP-6, low-density lipo 99.8 6.9E-17 2.3E-21 160.8 26.7 199 50-283 350-552 (619)
51 3m0c_C LDL receptor, low-densi 99.8 1.2E-16 4.1E-21 162.6 28.3 212 69-318 403-622 (791)
52 4a0p_A LRP6, LRP-6, low-densit 99.8 2.3E-16 7.8E-21 157.3 28.7 210 68-317 13-226 (628)
53 3kya_A Putative phosphatase; s 99.8 9.2E-17 3.1E-21 154.5 24.1 245 20-282 140-475 (496)
54 3vgz_A Uncharacterized protein 99.8 2.8E-15 9.7E-20 137.0 31.6 233 49-316 41-291 (353)
55 3vgz_A Uncharacterized protein 99.8 5.4E-15 1.8E-19 135.1 33.1 234 50-319 90-336 (353)
56 2iwa_A Glutamine cyclotransfer 99.7 8.6E-16 2.9E-20 136.6 25.2 204 47-281 19-236 (266)
57 2qe8_A Uncharacterized protein 99.7 6.9E-16 2.4E-20 142.5 23.0 205 49-271 67-310 (343)
58 3e5z_A Putative gluconolactona 99.7 8.4E-15 2.9E-19 131.7 28.6 200 47-282 67-286 (296)
59 3das_A Putative oxidoreductase 99.7 8.4E-15 2.9E-19 135.1 28.3 261 46-325 29-337 (347)
60 2p4o_A Hypothetical protein; p 99.7 1.5E-15 5E-20 138.1 22.4 223 19-271 32-278 (306)
61 3hfq_A Uncharacterized protein 99.7 6.3E-15 2.2E-19 135.2 26.3 249 47-317 38-306 (347)
62 1n7d_A LDL receptor, low-densi 99.7 1.4E-16 4.9E-21 160.8 16.4 211 69-317 385-603 (699)
63 3g4e_A Regucalcin; six bladed 99.7 3.8E-15 1.3E-19 134.6 22.6 193 49-270 54-261 (297)
64 3u4y_A Uncharacterized protein 99.7 6.8E-14 2.3E-18 127.0 30.7 221 30-283 20-253 (331)
65 2iwa_A Glutamine cyclotransfer 99.7 9E-15 3.1E-19 130.0 20.6 191 102-316 22-225 (266)
66 2g8s_A Glucose/sorbosone dehyd 99.7 2.7E-14 9.4E-19 132.7 23.8 253 48-316 17-341 (353)
67 3hfq_A Uncharacterized protein 99.7 2E-13 6.9E-18 125.1 29.1 215 48-281 85-316 (347)
68 2dg1_A DRP35, lactonase; beta 99.6 6.3E-14 2.1E-18 127.8 25.4 203 48-270 86-299 (333)
69 3dr2_A Exported gluconolactona 99.6 5.3E-14 1.8E-18 127.5 24.7 197 48-279 85-303 (305)
70 3c75_H MADH, methylamine dehyd 99.6 3.7E-14 1.3E-18 134.5 24.5 232 31-283 100-403 (426)
71 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 5.7E-14 1.9E-18 126.6 22.3 204 49-281 71-298 (314)
72 3no2_A Uncharacterized protein 99.6 3.5E-13 1.2E-17 120.9 26.8 227 59-318 4-233 (276)
73 3nol_A Glutamine cyclotransfer 99.6 6.3E-13 2.1E-17 117.1 26.1 194 45-270 39-244 (262)
74 3nok_A Glutaminyl cyclase; bet 99.6 6E-13 2.1E-17 117.3 24.3 191 46-270 52-254 (268)
75 3mbr_X Glutamine cyclotransfer 99.6 1.8E-12 6.2E-17 113.2 26.7 203 45-279 17-232 (243)
76 2ism_A Putative oxidoreductase 99.6 5.5E-14 1.9E-18 130.6 17.3 201 101-318 31-287 (352)
77 1l0q_A Surface layer protein; 99.6 5.9E-12 2E-16 116.9 30.9 222 49-315 32-262 (391)
78 3u4y_A Uncharacterized protein 99.6 1.1E-12 3.9E-17 118.9 24.4 220 55-315 4-239 (331)
79 3scy_A Hypothetical bacterial 99.6 6.9E-12 2.4E-16 115.6 29.4 245 47-316 48-325 (361)
80 3no2_A Uncharacterized protein 99.5 5.3E-12 1.8E-16 113.1 27.3 212 29-270 14-231 (276)
81 3a9g_A Putative uncharacterize 99.5 1.2E-12 4.1E-17 121.6 23.8 237 20-270 30-330 (354)
82 2mad_H Methylamine dehydrogena 99.5 9E-12 3.1E-16 116.5 29.8 232 48-306 66-369 (373)
83 1ri6_A Putative isomerase YBHE 99.5 1.1E-11 3.8E-16 112.2 29.4 243 48-315 37-295 (343)
84 3mbr_X Glutamine cyclotransfer 99.5 1.8E-12 6.3E-17 113.2 23.0 189 102-316 22-223 (243)
85 3qqz_A Putative uncharacterize 99.5 5.8E-12 2E-16 111.3 26.4 215 44-280 22-251 (255)
86 2oiz_A Aromatic amine dehydrog 99.5 4.8E-12 1.7E-16 117.6 26.6 256 31-307 32-356 (361)
87 3nol_A Glutamine cyclotransfer 99.5 8.1E-13 2.8E-17 116.4 20.0 187 103-315 45-243 (262)
88 1ri6_A Putative isomerase YBHE 99.5 7.7E-12 2.6E-16 113.2 27.4 234 50-307 85-331 (343)
89 3sjl_D Methylamine dehydrogena 99.5 2E-12 6.7E-17 120.9 23.7 230 48-307 78-382 (386)
90 1mda_H Methylamine dehydrogena 99.5 6.2E-13 2.1E-17 124.0 20.0 229 48-307 65-365 (368)
91 2ghs_A AGR_C_1268P; regucalcin 99.5 3.4E-12 1.2E-16 116.9 24.5 190 50-270 91-291 (326)
92 3q6k_A 43.2 kDa salivary prote 99.5 4.2E-12 1.4E-16 118.0 22.9 254 48-317 25-344 (381)
93 3scy_A Hypothetical bacterial 99.5 2.8E-11 9.6E-16 111.4 28.3 211 48-281 99-336 (361)
94 1cru_A Protein (soluble quinop 99.5 1.4E-11 4.9E-16 118.1 27.0 176 45-232 23-258 (454)
95 1nir_A Nitrite reductase; hemo 99.5 3.2E-11 1.1E-15 118.3 30.1 231 50-315 180-439 (543)
96 3nok_A Glutaminyl cyclase; bet 99.5 2.2E-12 7.5E-17 113.7 19.0 184 103-315 57-253 (268)
97 1nir_A Nitrite reductase; hemo 99.5 1.8E-11 6.2E-16 120.0 27.1 200 55-283 144-356 (543)
98 3c75_H MADH, methylamine dehyd 99.5 9.9E-12 3.4E-16 117.9 22.2 239 58-317 82-391 (426)
99 1l0q_A Surface layer protein; 99.5 1E-10 3.5E-15 108.4 28.7 195 50-283 75-276 (391)
100 2ece_A 462AA long hypothetical 99.4 8.3E-11 2.8E-15 111.1 27.9 258 41-315 63-399 (462)
101 3qqz_A Putative uncharacterize 99.4 2.7E-11 9.1E-16 107.0 23.2 203 96-315 23-241 (255)
102 1pby_B Quinohemoprotein amine 99.4 1E-10 3.5E-15 105.5 27.7 208 50-283 35-311 (337)
103 3bws_A Protein LP49; two-domai 99.4 1.4E-10 4.8E-15 109.0 28.4 222 50-315 171-419 (433)
104 1qks_A Cytochrome CD1 nitrite 99.4 2.1E-10 7.3E-15 112.9 30.6 238 48-317 196-460 (567)
105 1jof_A Carboxy-CIS,CIS-muconat 99.4 6.5E-11 2.2E-15 109.7 24.9 225 51-297 85-354 (365)
106 2p9w_A MAL S 1 allergenic prot 99.4 3.8E-11 1.3E-15 109.0 22.5 204 102-315 14-252 (334)
107 1jof_A Carboxy-CIS,CIS-muconat 99.4 1.4E-10 4.6E-15 107.5 25.1 213 49-281 40-290 (365)
108 2g8s_A Glucose/sorbosone dehyd 99.4 3.4E-11 1.2E-15 111.7 20.6 223 50-278 67-350 (353)
109 3bws_A Protein LP49; two-domai 99.4 4.4E-10 1.5E-14 105.6 28.3 203 45-281 208-431 (433)
110 1qks_A Cytochrome CD1 nitrite 99.4 1.8E-10 6E-15 113.4 26.5 207 50-283 155-374 (567)
111 1fwx_A Nitrous oxide reductase 99.4 4E-11 1.4E-15 116.8 19.8 240 59-320 100-411 (595)
112 2mad_H Methylamine dehydrogena 99.4 1.2E-09 4.2E-14 102.0 28.9 117 56-185 28-157 (373)
113 1jmx_B Amine dehydrogenase; ox 99.3 3.7E-10 1.3E-14 102.5 24.6 208 50-283 44-326 (349)
114 1jmx_B Amine dehydrogenase; ox 99.3 8.9E-10 3E-14 99.9 27.1 166 52-243 3-182 (349)
115 3sre_A PON1, serum paraoxonase 99.3 1.9E-10 6.6E-15 106.3 22.6 196 102-316 51-285 (355)
116 3das_A Putative oxidoreductase 99.3 7.8E-11 2.7E-15 108.6 19.5 202 101-318 32-282 (347)
117 1pby_B Quinohemoprotein amine 99.3 1.9E-09 6.4E-14 97.1 27.4 148 62-236 3-164 (337)
118 2ece_A 462AA long hypothetical 99.3 6.5E-10 2.2E-14 105.0 24.1 207 50-269 139-399 (462)
119 2oiz_A Aromatic amine dehydrog 99.3 3E-09 1E-13 98.6 26.7 106 69-186 30-142 (361)
120 1mda_H Methylamine dehydrogena 99.2 2.8E-10 9.5E-15 106.0 18.0 231 61-316 33-333 (368)
121 3hxj_A Pyrrolo-quinoline quino 99.2 7.8E-09 2.7E-13 93.3 25.5 214 53-319 102-316 (330)
122 3sjl_D Methylamine dehydrogena 99.2 2.2E-09 7.4E-14 100.3 21.8 121 55-187 39-172 (386)
123 1cru_A Protein (soluble quinop 99.2 1E-10 3.5E-15 112.1 12.6 155 101-271 27-247 (454)
124 3v9f_A Two-component system se 99.2 6E-09 2.1E-13 106.2 25.0 237 51-319 409-649 (781)
125 3ow8_A WD repeat-containing pr 99.2 2E-07 6.9E-12 84.6 32.2 227 46-313 78-306 (321)
126 1fwx_A Nitrous oxide reductase 99.1 2.6E-09 8.9E-14 104.1 19.5 239 49-311 134-457 (595)
127 1gxr_A ESG1, transducin-like e 99.1 6E-08 2.1E-12 87.0 27.1 194 48-279 141-334 (337)
128 1gxr_A ESG1, transducin-like e 99.1 3.6E-07 1.2E-11 81.8 31.6 199 49-283 98-297 (337)
129 4a2l_A BT_4663, two-component 99.1 3E-08 1E-12 101.3 25.8 239 51-319 408-652 (795)
130 3ow8_A WD repeat-containing pr 99.1 1.1E-07 3.7E-12 86.4 26.8 195 50-280 124-319 (321)
131 3hxj_A Pyrrolo-quinoline quino 99.1 3.9E-08 1.3E-12 88.6 23.8 175 51-270 139-313 (330)
132 3zwl_B Eukaryotic translation 99.1 5E-07 1.7E-11 81.9 31.1 218 40-283 24-250 (369)
133 2wg3_C Hedgehog-interacting pr 99.1 3.6E-08 1.2E-12 94.5 23.9 255 49-316 14-354 (463)
134 4h5i_A Guanine nucleotide-exch 99.1 4E-08 1.4E-12 91.0 23.6 204 50-283 135-344 (365)
135 2ymu_A WD-40 repeat protein; u 99.1 2E-07 7E-12 90.6 29.6 222 48-314 344-566 (577)
136 4a2l_A BT_4663, two-component 99.1 9.7E-08 3.3E-12 97.5 28.4 236 51-317 359-605 (795)
137 3v9f_A Two-component system se 99.1 2.5E-08 8.4E-13 101.7 23.6 236 51-318 365-603 (781)
138 4ery_A WD repeat-containing pr 99.0 5.1E-07 1.7E-11 80.8 28.5 208 41-283 16-224 (312)
139 1k8k_C P40, ARP2/3 complex 41 99.0 3.3E-07 1.1E-11 83.5 27.4 202 51-283 11-234 (372)
140 1got_B GT-beta; complex (GTP-b 99.0 1.3E-06 4.5E-11 79.6 31.0 203 50-283 99-302 (340)
141 2ymu_A WD-40 repeat protein; u 99.0 1.1E-07 3.7E-12 92.5 24.8 190 49-277 386-575 (577)
142 4ery_A WD repeat-containing pr 99.0 5E-06 1.7E-10 74.2 33.3 230 48-314 65-296 (312)
143 4gqb_B Methylosome protein 50; 98.9 3E-07 1E-11 84.6 22.7 198 50-281 129-330 (344)
144 1vyh_C Platelet-activating fac 98.9 1.8E-06 6.1E-11 81.0 28.4 202 46-283 106-328 (410)
145 1r5m_A SIR4-interacting protei 98.9 8.6E-07 2.9E-11 81.9 26.0 200 50-282 110-361 (425)
146 1got_B GT-beta; complex (GTP-b 98.9 1.8E-06 6.1E-11 78.7 27.6 207 42-283 49-258 (340)
147 3ei3_B DNA damage-binding prot 98.9 1.4E-06 4.6E-11 80.3 27.1 209 44-283 69-283 (383)
148 2aq5_A Coronin-1A; WD40 repeat 98.9 1.4E-06 4.8E-11 81.0 26.3 212 50-283 83-300 (402)
149 4e54_B DNA damage-binding prot 98.9 1.3E-07 4.5E-12 89.3 19.5 205 51-283 122-328 (435)
150 2z3z_A Dipeptidyl aminopeptida 98.9 3.5E-06 1.2E-10 84.2 30.6 206 51-283 183-436 (706)
151 2hqs_A Protein TOLB; TOLB, PAL 98.9 8.2E-07 2.8E-11 83.6 24.5 195 50-281 180-386 (415)
152 2ynn_A Coatomer subunit beta'; 98.9 5.4E-06 1.8E-10 74.2 28.8 200 49-283 14-218 (304)
153 3fm0_A Protein CIAO1; WDR39,SG 98.9 1.3E-06 4.3E-11 79.9 25.0 204 50-279 18-222 (345)
154 4g56_B MGC81050 protein; prote 98.9 1.1E-07 3.9E-12 87.6 18.0 207 50-283 44-259 (357)
155 3zwl_B Eukaryotic translation 98.9 4.2E-06 1.4E-10 75.6 28.2 197 46-270 72-278 (369)
156 1vyh_C Platelet-activating fac 98.8 2.4E-06 8.1E-11 80.1 26.8 198 50-283 152-370 (410)
157 2pbi_B Guanine nucleotide-bind 98.8 1.7E-05 5.7E-10 72.7 32.0 235 43-313 59-342 (354)
158 3frx_A Guanine nucleotide-bind 98.8 8.3E-06 2.8E-10 73.6 29.4 197 49-283 66-268 (319)
159 4g56_B MGC81050 protein; prote 98.8 3.6E-07 1.2E-11 84.2 20.6 199 50-282 141-343 (357)
160 3q6k_A 43.2 kDa salivary prote 98.8 1.2E-06 4.2E-11 81.2 23.9 199 50-270 88-342 (381)
161 4gqb_B Methylosome protein 50; 98.8 4.3E-06 1.5E-10 76.7 27.6 202 51-283 85-290 (344)
162 1k8k_C P40, ARP2/3 complex 41 98.8 9.2E-07 3.2E-11 80.5 22.7 204 47-282 51-274 (372)
163 4aez_A CDC20, WD repeat-contai 98.8 2.7E-05 9.3E-10 72.3 33.1 196 49-283 135-337 (401)
164 3mkq_A Coatomer beta'-subunit; 98.8 3.5E-06 1.2E-10 85.3 29.0 200 49-283 14-218 (814)
165 2pbi_B Guanine nucleotide-bind 98.8 3.3E-06 1.1E-10 77.5 25.7 195 50-277 156-352 (354)
166 3vl1_A 26S proteasome regulato 98.8 1.7E-06 6E-11 80.3 23.7 207 52-283 101-323 (420)
167 2vdu_B TRNA (guanine-N(7)-)-me 98.8 2.5E-06 8.4E-11 80.8 24.8 234 50-314 104-370 (450)
168 1erj_A Transcriptional repress 98.8 7.7E-06 2.6E-10 76.0 27.5 206 51-283 126-342 (393)
169 3vl1_A 26S proteasome regulato 98.8 4.3E-06 1.5E-10 77.6 25.8 206 48-282 139-365 (420)
170 3jrp_A Fusion protein of prote 98.8 1.2E-05 4E-10 73.1 28.1 206 50-283 13-241 (379)
171 3ott_A Two-component system se 98.8 3.4E-06 1.1E-10 85.6 26.5 241 51-318 326-578 (758)
172 3iz6_a 40S ribosomal protein R 98.8 2.6E-05 8.9E-10 72.1 30.5 214 44-283 62-330 (380)
173 3frx_A Guanine nucleotide-bind 98.7 3.4E-05 1.2E-09 69.4 30.4 208 45-283 14-228 (319)
174 2ojh_A Uncharacterized protein 98.7 3.8E-06 1.3E-10 73.3 22.9 185 49-268 42-233 (297)
175 4h5i_A Guanine nucleotide-exch 98.7 3.8E-05 1.3E-09 70.8 30.5 186 103-314 136-329 (365)
176 3amr_A 3-phytase; beta-propell 98.7 1.9E-06 6.6E-11 78.8 21.0 169 50-245 69-273 (355)
177 2aq5_A Coronin-1A; WD40 repeat 98.7 2.9E-06 1E-10 78.8 22.7 207 47-283 130-343 (402)
178 3dwl_C Actin-related protein 2 98.7 2.8E-07 9.7E-12 84.5 15.5 205 51-283 14-237 (377)
179 2pm9_A Protein WEB1, protein t 98.7 3.8E-06 1.3E-10 77.7 23.1 214 50-283 115-338 (416)
180 2ynn_A Coatomer subunit beta'; 98.7 3.4E-05 1.2E-09 68.9 27.9 199 50-283 57-260 (304)
181 3ei3_B DNA damage-binding prot 98.7 1.1E-05 3.9E-10 74.0 25.1 157 50-237 120-284 (383)
182 1sq9_A Antiviral protein SKI8; 98.7 1.1E-05 3.7E-10 74.2 24.7 221 49-281 122-394 (397)
183 2xyi_A Probable histone-bindin 98.7 6.5E-06 2.2E-10 77.5 23.6 212 46-282 179-410 (430)
184 3ott_A Two-component system se 98.7 7.2E-06 2.5E-10 83.1 25.4 233 51-318 375-618 (758)
185 1sq9_A Antiviral protein SKI8; 98.7 9E-06 3.1E-10 74.7 24.0 222 48-283 62-323 (397)
186 2xzm_R RACK1; ribosome, transl 98.7 3.4E-05 1.2E-09 70.0 27.6 198 50-282 78-285 (343)
187 3mkq_A Coatomer beta'-subunit; 98.7 1E-05 3.6E-10 81.8 26.5 202 47-283 54-260 (814)
188 2pm9_A Protein WEB1, protein t 98.6 3.9E-06 1.3E-10 77.6 21.1 214 50-283 69-295 (416)
189 1pgu_A Actin interacting prote 98.6 1.2E-05 4E-10 78.3 25.5 205 50-283 20-239 (615)
190 3sfz_A APAF-1, apoptotic pepti 98.6 5.4E-05 1.9E-09 80.5 32.4 164 42-236 609-775 (1249)
191 1r5m_A SIR4-interacting protei 98.6 4.2E-05 1.4E-09 70.4 27.8 215 50-283 47-320 (425)
192 1erj_A Transcriptional repress 98.6 5.6E-05 1.9E-09 70.1 28.7 210 49-280 166-387 (393)
193 3iz6_a 40S ribosomal protein R 98.6 3.3E-05 1.1E-09 71.4 26.8 209 51-281 160-374 (380)
194 4aez_A CDC20, WD repeat-contai 98.6 0.00011 3.7E-09 68.2 30.4 199 49-283 177-381 (401)
195 3q7m_A Lipoprotein YFGL, BAMB; 98.6 1.9E-05 6.5E-10 72.7 24.9 191 61-283 104-297 (376)
196 3dm0_A Maltose-binding peripla 98.6 5E-05 1.7E-09 76.0 29.4 199 50-283 432-633 (694)
197 4a9v_A PHOX; hydrolase, beta-p 98.6 4.3E-07 1.5E-11 87.8 13.4 116 101-225 384-552 (592)
198 1nr0_A Actin interacting prote 98.6 1E-05 3.5E-10 79.9 23.8 198 50-283 20-222 (611)
199 3odt_A Protein DOA1; ubiquitin 98.6 0.00021 7.3E-09 62.8 30.0 197 48-283 59-256 (313)
200 2hqs_A Protein TOLB; TOLB, PAL 98.6 1.2E-05 4.1E-10 75.6 22.7 189 59-283 143-345 (415)
201 3k26_A Polycomb protein EED; W 98.6 1E-05 3.6E-10 73.0 21.6 209 51-283 72-319 (366)
202 2ojh_A Uncharacterized protein 98.6 7.6E-06 2.6E-10 71.3 19.8 185 50-268 86-289 (297)
203 3dm0_A Maltose-binding peripla 98.6 0.00015 5E-09 72.5 31.5 213 44-283 378-593 (694)
204 2ecf_A Dipeptidyl peptidase IV 98.6 2.7E-05 9.2E-10 78.2 26.0 201 51-279 111-366 (741)
205 3pe7_A Oligogalacturonate lyas 98.6 3.9E-05 1.3E-09 70.4 25.0 206 53-283 85-330 (388)
206 2xzm_R RACK1; ribosome, transl 98.5 0.00013 4.3E-09 66.3 28.0 209 45-280 18-242 (343)
207 2z3z_A Dipeptidyl aminopeptida 98.5 5.2E-05 1.8E-09 75.7 27.6 203 50-279 83-341 (706)
208 4a11_B DNA excision repair pro 98.5 2.4E-05 8.1E-10 71.8 23.1 217 45-283 40-277 (408)
209 1yfq_A Cell cycle arrest prote 98.5 1E-05 3.4E-10 72.7 20.0 232 49-319 57-315 (342)
210 4aow_A Guanine nucleotide-bind 98.5 0.00048 1.6E-08 61.4 30.9 211 44-283 34-247 (340)
211 3amr_A 3-phytase; beta-propell 98.5 1.8E-05 6.2E-10 72.4 21.1 197 57-281 37-262 (355)
212 3o4h_A Acylamino-acid-releasin 98.5 3.8E-06 1.3E-10 82.2 18.0 188 50-280 66-274 (582)
213 2oaj_A Protein SNI1; WD40 repe 98.5 5.9E-05 2E-09 78.1 27.6 210 48-283 17-243 (902)
214 3i2n_A WD repeat-containing pr 98.5 5.2E-06 1.8E-10 74.9 17.5 204 55-281 124-352 (357)
215 2vdu_B TRNA (guanine-N(7)-)-me 98.5 1.4E-05 4.7E-10 75.6 21.1 164 102-283 104-272 (450)
216 3q7m_A Lipoprotein YFGL, BAMB; 98.5 2.8E-05 9.4E-10 71.6 22.5 215 61-317 144-368 (376)
217 2ecf_A Dipeptidyl peptidase IV 98.5 1.7E-05 5.7E-10 79.7 22.2 189 51-268 211-441 (741)
218 3jrp_A Fusion protein of prote 98.5 2.7E-05 9.2E-10 70.6 21.4 209 49-281 56-286 (379)
219 3fm0_A Protein CIAO1; WDR39,SG 98.5 5E-05 1.7E-09 69.2 23.0 207 50-281 63-282 (345)
220 3f3f_A Nucleoporin SEH1; struc 98.5 0.00025 8.7E-09 62.8 27.2 210 49-281 12-248 (351)
221 1pgu_A Actin interacting prote 98.5 0.00029 1E-08 68.3 29.7 213 43-283 58-284 (615)
222 3azo_A Aminopeptidase; POP fam 98.4 6.4E-05 2.2E-09 74.4 24.5 204 53-281 81-324 (662)
223 3sfz_A APAF-1, apoptotic pepti 98.4 0.0001 3.6E-09 78.3 27.5 208 49-280 658-911 (1249)
224 3dwl_C Actin-related protein 2 98.4 6.7E-06 2.3E-10 75.3 15.6 204 50-281 57-280 (377)
225 3i2n_A WD repeat-containing pr 98.4 8.5E-05 2.9E-09 66.8 22.8 205 46-281 16-242 (357)
226 3jro_A Fusion protein of prote 98.4 4.1E-05 1.4E-09 77.6 22.6 205 50-282 11-238 (753)
227 1nr0_A Actin interacting prote 98.4 0.00032 1.1E-08 69.1 28.4 204 49-283 148-356 (611)
228 3dw8_B Serine/threonine-protei 98.4 0.00011 3.7E-09 68.5 23.9 218 50-282 30-315 (447)
229 2pm7_B Protein transport prote 98.4 0.00029 9.9E-09 62.5 25.4 205 50-282 11-238 (297)
230 3mmy_A MRNA export factor; mRN 98.4 0.00075 2.6E-08 60.5 28.4 245 48-317 39-336 (368)
231 3odt_A Protein DOA1; ubiquitin 98.4 0.0003 1E-08 61.8 25.1 200 42-283 12-215 (313)
232 1xfd_A DIP, dipeptidyl aminope 98.3 2.8E-05 9.7E-10 77.7 19.9 160 50-222 18-191 (723)
233 4aow_A Guanine nucleotide-bind 98.3 0.0013 4.6E-08 58.4 31.1 198 49-283 87-287 (340)
234 2xyi_A Probable histone-bindin 98.3 4.1E-05 1.4E-09 71.9 19.5 203 50-282 130-353 (430)
235 3gre_A Serine/threonine-protei 98.3 0.00033 1.1E-08 65.3 25.6 208 49-283 64-293 (437)
236 3k26_A Polycomb protein EED; W 98.3 7.6E-05 2.6E-09 67.2 20.4 211 45-280 112-364 (366)
237 3azo_A Aminopeptidase; POP fam 98.3 9.7E-05 3.3E-09 73.1 22.7 211 49-283 130-370 (662)
238 3pe7_A Oligogalacturonate lyas 98.3 7.5E-05 2.6E-09 68.4 20.4 197 54-283 41-274 (388)
239 3lrv_A PRE-mRNA-splicing facto 98.3 0.00064 2.2E-08 61.4 26.2 160 102-282 127-292 (343)
240 2wg3_C Hedgehog-interacting pr 98.3 7.7E-05 2.6E-09 71.3 20.7 213 51-270 71-354 (463)
241 3v7d_B Cell division control p 98.3 0.002 6.7E-08 60.5 30.0 224 50-314 205-449 (464)
242 3v7d_B Cell division control p 98.3 0.00077 2.6E-08 63.3 27.1 202 53-283 127-342 (464)
243 3dw8_B Serine/threonine-protei 98.3 9.1E-05 3.1E-09 69.1 20.0 222 51-283 96-374 (447)
244 3f3f_A Nucleoporin SEH1; struc 98.3 0.00066 2.3E-08 60.1 24.8 173 48-235 57-249 (351)
245 2ad6_A Methanol dehydrogenase 98.2 0.0022 7.4E-08 62.9 30.3 202 105-319 239-528 (571)
246 1yfq_A Cell cycle arrest prote 98.2 9.2E-05 3.1E-09 66.3 18.3 202 50-281 13-224 (342)
247 3s25_A Hypothetical 7-bladed b 98.2 0.00013 4.4E-09 65.8 19.0 180 53-281 19-215 (302)
248 3s25_A Hypothetical 7-bladed b 98.2 0.00032 1.1E-08 63.1 21.6 189 70-316 88-281 (302)
249 3lrv_A PRE-mRNA-splicing facto 98.2 0.00058 2E-08 61.7 23.5 195 57-283 45-245 (343)
250 1xfd_A DIP, dipeptidyl aminope 98.2 0.00012 4.2E-09 73.0 20.2 152 103-268 257-426 (723)
251 4a11_B DNA excision repair pro 98.2 0.00041 1.4E-08 63.3 22.2 166 50-236 101-277 (408)
252 1k32_A Tricorn protease; prote 98.2 0.00017 5.9E-09 75.7 21.6 208 49-283 379-638 (1045)
253 1kb0_A Quinohemoprotein alcoho 98.2 0.0024 8.3E-08 63.9 29.1 203 104-318 246-540 (677)
254 2oit_A Nucleoporin 214KDA; NH2 98.1 0.00083 2.8E-08 63.4 23.9 242 50-307 94-368 (434)
255 2hes_X YDR267CP; beta-propelle 98.1 0.00077 2.6E-08 60.8 22.7 206 50-280 109-326 (330)
256 4gga_A P55CDC, cell division c 98.1 0.0026 8.7E-08 59.2 26.9 202 48-283 147-354 (420)
257 3jro_A Fusion protein of prote 98.1 0.00014 4.9E-09 73.6 19.5 208 50-281 55-284 (753)
258 2pm7_B Protein transport prote 98.1 0.0012 4.3E-08 58.3 23.4 205 50-281 55-284 (297)
259 3bg1_A Protein SEC13 homolog; 98.1 0.00041 1.4E-08 62.2 20.3 206 50-282 15-247 (316)
260 3vu4_A KMHSV2; beta-propeller 98.1 0.00094 3.2E-08 60.9 23.0 74 206-282 197-271 (355)
261 3gre_A Serine/threonine-protei 98.1 0.00028 9.7E-09 65.8 19.7 210 50-283 113-360 (437)
262 2hes_X YDR267CP; beta-propelle 98.1 0.0053 1.8E-07 55.1 31.6 204 46-280 12-228 (330)
263 2j04_A TAU60, YPL007P, hypothe 98.1 0.0018 6.1E-08 63.1 25.1 191 48-274 85-290 (588)
264 4e54_B DNA damage-binding prot 98.1 0.00014 4.9E-09 68.2 16.8 159 102-281 121-281 (435)
265 2xdw_A Prolyl endopeptidase; a 98.0 0.0021 7.3E-08 64.3 26.1 204 51-283 127-369 (710)
266 1flg_A Protein (quinoprotein e 98.0 0.011 3.8E-07 58.0 30.5 207 104-320 249-551 (582)
267 3o4h_A Acylamino-acid-releasin 98.0 0.0001 3.5E-09 71.9 15.3 182 52-268 113-298 (582)
268 1w6s_A Methanol dehydrogenase 98.0 0.011 3.7E-07 58.3 29.1 202 105-319 245-537 (599)
269 3mmy_A MRNA export factor; mRN 98.0 0.0007 2.4E-08 60.7 19.2 201 48-270 86-334 (368)
270 4gga_A P55CDC, cell division c 97.9 0.0098 3.4E-07 55.2 27.2 198 49-283 106-311 (420)
271 1k32_A Tricorn protease; prote 97.9 0.00028 9.5E-09 74.1 17.9 180 50-269 297-490 (1045)
272 4a9v_A PHOX; hydrolase, beta-p 97.9 5.9E-05 2E-09 73.0 11.6 113 153-269 383-549 (592)
273 1kb0_A Quinohemoprotein alcoho 97.9 0.01 3.4E-07 59.4 28.4 168 60-245 77-301 (677)
274 1kv9_A Type II quinohemoprotei 97.9 0.0052 1.8E-07 61.3 25.6 200 105-318 234-521 (668)
275 3c5m_A Oligogalacturonate lyas 97.9 0.00027 9.4E-09 64.5 14.9 182 53-268 85-299 (396)
276 3bg1_A Protein SEC13 homolog; 97.9 0.0037 1.3E-07 55.8 22.1 204 50-281 59-292 (316)
277 3vu4_A KMHSV2; beta-propeller 97.9 0.0055 1.9E-07 55.7 23.5 75 154-236 196-272 (355)
278 1yiq_A Quinohemoprotein alcoho 97.8 0.01 3.5E-07 59.4 26.9 84 226-319 455-539 (689)
279 1p22_A F-BOX/WD-repeat protein 97.8 0.015 5.2E-07 54.1 25.8 188 55-283 138-326 (435)
280 4ggc_A P55CDC, cell division c 97.8 0.015 5.3E-07 50.8 25.4 205 48-280 67-313 (318)
281 2ovr_B FBW7, F-BOX/WD repeat p 97.8 0.025 8.4E-07 52.7 29.7 187 51-283 162-349 (445)
282 2ovr_B FBW7, F-BOX/WD repeat p 97.7 0.029 1E-06 52.2 28.5 191 50-283 201-392 (445)
283 1tl2_A L10, protein (tachylect 97.7 0.00018 6.3E-09 61.3 9.9 102 153-270 40-153 (236)
284 4a5s_A Dipeptidyl peptidase 4 97.7 0.0038 1.3E-07 62.8 20.5 153 52-221 20-188 (740)
285 3c5m_A Oligogalacturonate lyas 97.7 0.0016 5.6E-08 59.3 16.3 169 50-236 189-385 (396)
286 1tl2_A L10, protein (tachylect 97.6 0.0013 4.5E-08 56.1 14.0 150 102-279 42-207 (236)
287 2j04_B YDR362CP, TAU91; beta p 97.6 0.0011 3.9E-08 64.2 15.5 201 51-279 210-425 (524)
288 4gq1_A NUP37; propeller, trans 97.6 0.011 3.7E-07 54.6 21.6 210 50-280 138-387 (393)
289 2xdw_A Prolyl endopeptidase; a 97.6 0.015 5.2E-07 58.1 24.2 204 52-283 174-415 (710)
290 2gop_A Trilobed protease; beta 97.6 0.0049 1.7E-07 55.2 18.3 146 51-232 61-250 (347)
291 4ggc_A P55CDC, cell division c 97.6 0.016 5.3E-07 50.8 21.1 165 46-235 148-315 (318)
292 1flg_A Protein (quinoprotein e 97.6 0.03 1E-06 54.8 24.9 80 174-268 465-545 (582)
293 2ad6_A Methanol dehydrogenase 97.6 0.03 1E-06 54.7 24.8 112 61-189 63-191 (571)
294 1yiq_A Quinohemoprotein alcoho 97.5 0.014 4.9E-07 58.4 22.6 78 175-268 455-534 (689)
295 1p22_A F-BOX/WD-repeat protein 97.5 0.039 1.3E-06 51.2 23.3 187 51-281 176-364 (435)
296 2oaj_A Protein SNI1; WD40 repe 97.5 0.0093 3.2E-07 61.6 20.4 168 50-236 60-243 (902)
297 1yr2_A Prolyl oligopeptidase; 97.5 0.013 4.6E-07 58.8 21.2 199 51-280 165-393 (741)
298 2bkl_A Prolyl endopeptidase; m 97.4 0.0098 3.4E-07 59.3 19.9 201 51-280 123-349 (695)
299 1kv9_A Type II quinohemoprotei 97.4 0.021 7.3E-07 56.9 21.7 78 175-268 438-517 (668)
300 2w18_A PALB2, fancn, partner a 97.4 0.032 1.1E-06 51.0 20.4 156 105-279 183-354 (356)
301 1k3i_A Galactose oxidase precu 97.4 0.023 7.9E-07 56.4 21.4 239 53-314 247-527 (656)
302 2w18_A PALB2, fancn, partner a 97.4 0.036 1.2E-06 50.6 20.7 160 53-233 183-355 (356)
303 3zwu_A Alkaline phosphatase PH 97.3 0.0016 5.5E-08 63.8 12.3 109 204-316 383-550 (592)
304 1w6s_A Methanol dehydrogenase 97.3 0.073 2.5E-06 52.3 24.3 120 53-189 57-197 (599)
305 3zwu_A Alkaline phosphatase PH 97.3 0.0028 9.4E-08 62.1 13.6 113 101-222 384-549 (592)
306 1z68_A Fibroblast activation p 97.3 0.0054 1.9E-07 61.1 15.8 155 51-222 18-187 (719)
307 2bkl_A Prolyl endopeptidase; m 97.2 0.032 1.1E-06 55.6 20.6 202 52-283 171-398 (695)
308 2j04_A TAU60, YPL007P, hypothe 97.2 0.03 1E-06 54.5 19.4 157 51-231 132-295 (588)
309 3ii7_A Kelch-like protein 7; p 97.2 0.11 3.6E-06 45.9 28.0 219 60-315 12-254 (306)
310 2gop_A Trilobed protease; beta 97.2 0.036 1.2E-06 49.4 18.7 146 50-232 16-206 (347)
311 2oit_A Nucleoporin 214KDA; NH2 97.1 0.011 3.6E-07 55.8 14.4 201 51-268 39-257 (434)
312 2j04_B YDR362CP, TAU91; beta p 97.0 0.0095 3.3E-07 57.6 13.6 157 49-236 267-429 (524)
313 4gq1_A NUP37; propeller, trans 96.9 0.25 8.4E-06 45.3 22.9 157 62-236 102-287 (393)
314 1k3i_A Galactose oxidase precu 96.9 0.32 1.1E-05 48.0 24.2 123 50-188 187-327 (656)
315 4asc_A Kelch repeat and BTB do 96.9 0.22 7.4E-06 44.1 22.4 220 56-313 42-302 (315)
316 2zwa_A Leucine carboxyl methyl 96.9 0.45 1.5E-05 47.5 25.6 209 58-285 396-639 (695)
317 2woz_A Kelch repeat and BTB do 96.8 0.24 8.2E-06 43.9 23.3 220 56-313 53-312 (318)
318 1z68_A Fibroblast activation p 96.7 0.011 3.9E-07 58.8 12.4 112 104-236 19-140 (719)
319 2xn4_A Kelch-like protein 2; s 96.7 0.28 9.6E-06 42.9 26.5 209 70-314 30-257 (302)
320 3iuj_A Prolyl endopeptidase; h 96.7 0.25 8.6E-06 49.1 21.6 160 51-236 131-315 (693)
321 1zgk_A Kelch-like ECH-associat 96.6 0.33 1.1E-05 42.8 24.4 220 59-314 24-268 (308)
322 2vpj_A Kelch-like protein 12; 96.6 0.33 1.1E-05 42.4 26.0 209 70-314 31-259 (301)
323 1yr2_A Prolyl oligopeptidase; 96.5 0.28 9.7E-06 49.1 21.2 201 52-283 212-442 (741)
324 2xbg_A YCF48-like protein; pho 96.5 0.42 1.4E-05 42.8 20.5 187 51-270 124-311 (327)
325 3sbq_A Nitrous-oxide reductase 96.5 0.58 2E-05 45.2 21.4 200 59-279 141-405 (638)
326 2hz6_A Endoplasmic reticulum t 96.3 0.0033 1.1E-07 57.9 4.9 146 53-237 4-151 (369)
327 4a5s_A Dipeptidyl peptidase 4 96.3 0.1 3.6E-06 52.2 16.3 140 103-264 19-183 (740)
328 2uvk_A YJHT; unknown function, 96.3 0.59 2E-05 41.9 25.0 223 59-314 19-322 (357)
329 3iuj_A Prolyl endopeptidase; h 96.1 0.77 2.6E-05 45.6 21.3 197 52-282 178-405 (693)
330 3ii7_A Kelch-like protein 7; p 95.9 0.79 2.7E-05 40.1 24.2 199 59-287 55-278 (306)
331 2xbg_A YCF48-like protein; pho 95.9 0.92 3.1E-05 40.5 27.0 186 50-270 37-223 (327)
332 4asc_A Kelch repeat and BTB do 95.7 1 3.5E-05 39.6 24.8 211 69-313 12-248 (315)
333 2xn4_A Kelch-like protein 2; s 95.6 1 3.4E-05 39.3 26.0 197 59-286 61-281 (302)
334 3b7f_A Glycosyl hydrolase, BNR 95.6 0.71 2.4E-05 42.2 17.4 162 101-270 55-252 (394)
335 1zgk_A Kelch-like ECH-associat 95.5 1.1 3.9E-05 39.2 23.6 197 59-286 70-292 (308)
336 3sbq_A Nitrous-oxide reductase 95.1 0.029 9.8E-07 54.1 6.2 116 153-270 322-453 (638)
337 2zwa_A Leucine carboxyl methyl 95.0 2 6.8E-05 42.8 19.6 196 52-270 443-673 (695)
338 2hz6_A Endoplasmic reticulum t 94.8 0.025 8.6E-07 51.9 4.7 140 112-283 9-150 (369)
339 3b7f_A Glycosyl hydrolase, BNR 94.4 2.9 9.8E-05 38.1 18.3 201 49-268 55-296 (394)
340 2xe4_A Oligopeptidase B; hydro 94.4 1.4 4.7E-05 44.3 16.9 117 51-184 176-304 (751)
341 2vpj_A Kelch-like protein 12; 94.3 2.3 8E-05 36.8 27.4 199 59-287 62-284 (301)
342 3a0f_A Xyloglucanase; beta-pro 92.4 10 0.00034 38.1 24.3 217 50-283 22-283 (763)
343 2be1_A Serine/threonine-protei 92.3 0.78 2.7E-05 41.6 9.9 68 112-186 10-78 (339)
344 2woz_A Kelch repeat and BTB do 91.4 6.8 0.00023 34.2 25.1 179 112-314 56-259 (318)
345 2uvk_A YJHT; unknown function, 91.1 7.8 0.00027 34.3 24.4 180 112-314 19-258 (357)
346 2cn3_A Xyloglucanase, beta-1,4 88.7 21 0.0007 35.6 19.5 123 102-231 24-160 (737)
347 2xe4_A Oligopeptidase B; hydro 88.2 15 0.00051 36.6 16.3 157 52-233 224-398 (751)
348 1xip_A Nucleoporin NUP159; bet 83.4 24 0.00083 32.2 13.8 177 51-268 40-230 (388)
349 2cn3_A Xyloglucanase, beta-1,4 83.3 38 0.0013 33.6 24.9 205 50-268 24-260 (737)
350 3s9j_A Member of DUF4221 famil 79.8 12 0.0004 34.2 10.1 128 112-245 37-182 (369)
351 1xip_A Nucleoporin NUP159; bet 74.7 51 0.0017 30.1 19.1 148 51-234 90-254 (388)
352 3hx6_A Type 4 fimbrial biogene 66.6 19 0.00064 34.8 8.3 54 128-185 223-285 (570)
353 2be1_A Serine/threonine-protei 60.9 41 0.0014 30.1 9.1 65 165-236 11-77 (339)
354 3elq_A Arylsulfate sulfotransf 59.5 1.3E+02 0.0044 29.0 15.6 118 105-234 211-384 (571)
355 1sqj_A OXG-RCBH, oligoxylogluc 55.1 1.7E+02 0.0059 29.1 23.5 204 50-268 16-247 (789)
356 3a0f_A Xyloglucanase; beta-pro 50.8 2E+02 0.0068 28.6 18.9 170 101-283 21-212 (763)
357 1sqj_A OXG-RCBH, oligoxylogluc 48.1 2.2E+02 0.0076 28.3 21.1 169 101-283 15-200 (789)
358 2xzh_A Clathrin heavy chain 1; 43.2 1.9E+02 0.0063 26.1 12.8 72 96-189 255-328 (365)
359 1bpo_A Protein (clathrin); cla 38.2 2.6E+02 0.0088 26.3 14.0 71 96-188 254-326 (494)
360 3s9j_A Member of DUF4221 famil 31.8 1.9E+02 0.0065 26.0 8.7 78 162-245 35-118 (369)
361 3elq_A Arylsulfate sulfotransf 31.3 3.6E+02 0.012 25.9 20.6 38 155-193 356-394 (571)
362 3dzw_A Agglutinin; lectin, man 25.5 1.8E+02 0.0063 20.6 8.1 46 209-269 53-98 (109)
363 3mez_B Mannose-specific lectin 20.5 2.4E+02 0.0083 20.2 8.7 46 209-269 60-105 (113)
No 1
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.97 E-value=1.2e-28 Score=223.98 Aligned_cols=276 Identities=18% Similarity=0.223 Sum_probs=197.8
Q ss_pred ceeEEEcCCCcceeeeEEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcC--C---CCcceEEE---e
Q 039428 39 THVYQYHSPSFLCETAKWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVV--G---NATMGIAV---D 109 (335)
Q Consensus 39 ~~~~~~~~~~~~pegia~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~--~---~~p~Gi~~---d 109 (335)
++.|.+++.+.+||+++||+..+++|++ +.+++|.++++.++. .++ + ..++.. + ..+.||.+ |
T Consensus 3 ~~~i~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~-----~~~--~-~~~~~s~~g~~~~~~sGl~~~~~D 74 (334)
T 2p9w_A 3 PDQIDVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQS-----HFN--V-VIDGASSNGDGEQQMSGLSLLTHD 74 (334)
T ss_dssp CSEEEECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCC-----EEE--E-CCTTTCCSSCCSEEEEEEEESSSS
T ss_pred CceEEecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCe-----EEE--E-ecCCccccCCCcceeeEEEEeccC
Confidence 5789999999999999999987788888 789999999864343 222 2 344432 2 24789999 7
Q ss_pred CCCCeEEEEEecC------CCC---ccceEEEEECC---CCeEEEEeecCCCcc--------CCCCCCceeECCCCcEEE
Q 039428 110 RPRNRLLVAFTDV------LGN---KYSALAAYDLS---TWKRLFLTQLSGKSE--------EKSTADDIAVDAEGNAYV 169 (335)
Q Consensus 110 ~~~g~l~v~~~D~------~~~---~~~~v~~~d~~---~~~~~~~~~~~~~~~--------~~~~p~~~~vd~~G~lyV 169 (335)
+ +++|||+. +. .+. ..+.|++||+. +++.++.+++..... ....+||+++|++||+||
T Consensus 75 ~-~grL~vv~-~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYV 152 (334)
T 2p9w_A 75 N-SKRLFAVM-KNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYV 152 (334)
T ss_dssp S-CCEEEEEE-EETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEE
T ss_pred C-CCcEEEEE-cccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEE
Confidence 7 59999963 32 110 12579999999 788777777643221 235699999999999999
Q ss_pred EeCCC-CeEEEEccCCcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEecc-
Q 039428 170 TDVVS-SKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELR- 246 (335)
Q Consensus 170 ~d~~~-~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~- 246 (335)
+++.. +.|+|++++|+....+. ..+.......++|||+++||| .|++++. .++|++||++.. ....++..
T Consensus 153 t~s~~~~~I~rV~pdG~~~~~~~----~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~p--v~~~v~~~~ 225 (334)
T 2p9w_A 153 AFALGMPAIARVSADGKTVSTFA----WESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKP--YAWPEPVKI 225 (334)
T ss_dssp EEEESSCEEEEECTTSCCEEEEE----ECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSS--SCCCEECEE
T ss_pred eCCCCCCeEEEEeCCCCEEeeee----ecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCC--cceeecccc
Confidence 99999 99999999998555331 111112346789999999999 6777877 999999999854 22134432
Q ss_pred -CC-cCCCCCCeE-EEcCCCcE-EEEecCCCeEEEEEcCCCcEEEEEeeeecCCC-CCcceEEEE----eCCeEEE-Eec
Q 039428 247 -GG-SSLSLGDGL-ALLSPTKL-VVAGNPYPSARLVESSDGWETASVVAKFNGPT-HRVATAATV----KDGRVYL-SHL 316 (335)
Q Consensus 247 -g~-~~~~~pdGi-a~d~~g~l-~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~-~~~Pt~va~----~~g~lyV-~~~ 316 (335)
|. ..+..|||| +...+|++ +|++.. +..+++++.|+|++++..+.+.++. ...++..++ .+++||+ .+.
T Consensus 226 ~G~~~~~~~~dgilp~~~~G~vllV~~~~-~~~~~l~S~DgW~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 226 NGDFGTLSGTEKIVTVPVGNESVLVGARA-PYAISFRSWDNWKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp SSCCCCCTTEEEEEEEEETTEEEEEEEET-TEEEEEECSSTTSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECC
T ss_pred cCCcccccCcccccccccCCEEEEEEcCC-CCEEEEECCCCcceeEEeeeecCccccCceeEEEEeccccCCeEEEEeee
Confidence 21 135779996 66677876 777654 5578888888999999998875431 344555555 3799998 777
Q ss_pred cCCCCCcccceeeeee
Q 039428 317 LGLGFPNTKKKHLLVE 332 (335)
Q Consensus 317 ~~~~~~~~~~~~~~~~ 332 (335)
++.+..+.-++||+.+
T Consensus 305 f~~~~~g~r~~f~~~d 320 (334)
T 2p9w_A 305 FDNGAHGGRSDYPLYK 320 (334)
T ss_dssp GGGTTTSCCCCEEEEE
T ss_pred cCCcccCCcceeechh
Confidence 7766665557788764
No 2
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.95 E-value=4e-25 Score=200.60 Aligned_cols=254 Identities=14% Similarity=0.181 Sum_probs=175.8
Q ss_pred EEEcCCCcceeeeEEcCC-CCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEe
Q 039428 42 YQYHSPSFLCETAKWDDV-GRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFT 120 (335)
Q Consensus 42 ~~~~~~~~~pegia~d~~-g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~ 120 (335)
..+.....++||++|+++ +.+||++..+++|+++|+.++. .. ....+ ..+.++++++ +|++|++.
T Consensus 6 ~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~-----~~---~~~~~----~~~~~i~~~~-dG~l~v~~- 71 (297)
T 3g4e_A 6 CVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ-----VQ---RVTMD----APVSSVALRQ-SGGYVATI- 71 (297)
T ss_dssp EEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC-----EE---EEECS----SCEEEEEEBT-TSSEEEEE-
T ss_pred EEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCc-----EE---EEeCC----CceEEEEECC-CCCEEEEE-
Confidence 344556678999999996 5566666888999999964343 11 22223 3678999997 78899963
Q ss_pred cCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeC-----------CCCeEEEEccCCcEEEE
Q 039428 121 DVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDV-----------VSSKIWKVGVEGQLLSI 189 (335)
Q Consensus 121 D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~-----------~~~~I~~~d~~g~~~~~ 189 (335)
+ ..|++||+++++......... ....+.||++++|++|++|+++. ..+.|++++++++...+
T Consensus 72 ~------~~l~~~d~~~g~~~~~~~~~~-~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~ 144 (297)
T 3g4e_A 72 G------TKFCALNWKEQSAVVLATVDN-DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKY 144 (297)
T ss_dssp T------TEEEEEETTTTEEEEEEECCT-TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEE
T ss_pred C------CeEEEEECCCCcEEEEEecCC-CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEE
Confidence 1 359999999887764433321 12257899999999999999873 34689999998876543
Q ss_pred ecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCC--CCc-eeEEEE-eccCCcCCCCCCeEEEcCCCc
Q 039428 190 IRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIR--KEE-EEVKLI-ELRGGSSLSLGDGLALLSPTK 264 (335)
Q Consensus 190 ~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~--~~~-~~~~~~-~~~g~~~~~~pdGia~d~~g~ 264 (335)
.. ....||||+++||| .||++++.+++|++++.+ .+. ...+.+ .... . ...|+||++|++|+
T Consensus 145 ~~-----------~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~-~-~~~p~g~~~d~~G~ 211 (297)
T 3g4e_A 145 FD-----------QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK-E-EQIPDGMCIDAEGK 211 (297)
T ss_dssp EE-----------EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG-G-GCEEEEEEEBTTSC
T ss_pred ee-----------ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC-C-CCCCCeeEECCCCC
Confidence 21 12358999999999 799999999999999874 221 012233 2221 1 24699999999999
Q ss_pred EEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe---CCeEEEEecc-CCCCCcccceeeeeeecC
Q 039428 265 LVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATVK---DGRVYLSHLL-GLGFPNTKKKHLLVEAVF 335 (335)
Q Consensus 265 l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~---~g~lyV~~~~-~~~~~~~~~~~~~~~~~~ 335 (335)
|||+....+.+.+++...+ +.+..+..|. ..|++++|. .++|||++.. +.. ++++++.|+++++|
T Consensus 212 lwva~~~~~~v~~~d~~tG----~~~~~i~~p~-~~~t~~~f~g~d~~~L~vt~~~~~~~-~~~~~~~p~~G~~f 280 (297)
T 3g4e_A 212 LWVACYNGGRVIRLDPVTG----KRLQTVKLPV-DKTTSCCFGGKNYSEMYVTCARDGMD-PEGLLRQPEAGGIF 280 (297)
T ss_dssp EEEEEETTTEEEEECTTTC----CEEEEEECSS-SBEEEEEEESGGGCEEEEEEBCTTCC-HHHHHHCTTTTCEE
T ss_pred EEEEEcCCCEEEEEcCCCc----eEEEEEECCC-CCceEEEEeCCCCCEEEEEcCCcCCC-hhHccCCCCCceEE
Confidence 9999775566777765434 3344454453 468999995 4789996543 322 22345677777765
No 3
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.94 E-value=5.6e-24 Score=195.13 Aligned_cols=249 Identities=15% Similarity=0.173 Sum_probs=168.2
Q ss_pred CCceeEEEcCCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCc----------------CC
Q 039428 37 PATHVYQYHSPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDV----------------VG 100 (335)
Q Consensus 37 ~~~~~~~~~~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~----------------~~ 100 (335)
+.-+.+.+++.-..||+++|+++|+++|++..+++|+++++.++. +.. +...... ..
T Consensus 7 ~~~~~i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~-----~~~--~~~~~~~~~~~~~~g~~~~~~~~~~ 79 (322)
T 2fp8_A 7 PILKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSG-----FVD--FAYASPYWNKAFCENSTDAEKRPLC 79 (322)
T ss_dssp ---CEEEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTC-----EEE--EEESCTTCCHHHHTTCCCGGGHHHH
T ss_pred CccceeecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCc-----eEE--EecccccccccccccccchhccccC
Confidence 344567777766789999999999988899888999999854333 221 2211100 01
Q ss_pred CCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC-CCcEEEEeCC------
Q 039428 101 NATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVV------ 173 (335)
Q Consensus 101 ~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~------ 173 (335)
..|.||++++++++|||+ |.. +.|+++|++++++....... .+..+..|+++++|+ +|++||+|..
T Consensus 80 ~~p~gi~~~~~~g~l~v~--d~~----~~i~~~d~~~g~~~~~~~~~-~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~ 152 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIV--DCY----YHLSVVGSEGGHATQLATSV-DGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDR 152 (322)
T ss_dssp CCEEEEEEETTTTEEEEE--ETT----TEEEEECTTCEECEEEESEE-TTEECSCEEEEEECTTTCCEEEEESCSSCCTT
T ss_pred CCCceEEEcCCCCcEEEE--ECC----CCEEEEeCCCCEEEEecccC-CCCcccccceEEEecCCCEEEEECCccccccc
Confidence 368999999547999995 443 34999999877544222211 112367899999999 9999999975
Q ss_pred -----------CCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCc-eeE
Q 039428 174 -----------SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEE-EEV 240 (335)
Q Consensus 174 -----------~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~-~~~ 240 (335)
.++|+++|+++.....+.. ....|+||++++|| .|||+++.+++|+++++++.. +..
T Consensus 153 ~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~----------~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~ 222 (322)
T 2fp8_A 153 GVQQIMDTSDKTGRLIKYDPSTKETTLLLK----------ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTA 222 (322)
T ss_dssp CHHHHHHHTCCCEEEEEEETTTTEEEEEEE----------EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCE
T ss_pred ccceehcccCCCceEEEEeCCCCEEEEecc----------CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCcc
Confidence 3789999997554432211 23459999999998 699999999999999998631 133
Q ss_pred EEEeccCCcCCCCCCeEEEcCCCcEEEEecC--------CCeEEEEEcCCCcEEEEEeeeecCCC---CCcceEEEEeCC
Q 039428 241 KLIELRGGSSLSLGDGLALLSPTKLVVAGNP--------YPSARLVESSDGWETASVVAKFNGPT---HRVATAATVKDG 309 (335)
Q Consensus 241 ~~~~~~g~~~~~~pdGia~d~~g~l~va~~~--------~~~~~v~~~~~~~~~~~~~~~~~~p~---~~~Pt~va~~~g 309 (335)
+.+.. . .. |+||++|++|++||++.. ....+|.+.+.+. +....+..|. ...|+++++.++
T Consensus 223 ~~~~~---~-~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G---~~~~~~~~~~g~~~~~~~~~~~~~g 294 (322)
T 2fp8_A 223 EVLVK---I-PN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFG---NILEVIPLPPPFAGEHFEQIQEHDG 294 (322)
T ss_dssp EEEEE---C-SS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTS---CEEEEEECCTTTTTSCCCEEEEETT
T ss_pred ceEEe---C-CC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCC---CEEEEEECCCCCccccceEEEEeCC
Confidence 33331 1 13 999999999999999763 1123343433332 2233343342 567888888899
Q ss_pred eEEEEecc
Q 039428 310 RVYLSHLL 317 (335)
Q Consensus 310 ~lyV~~~~ 317 (335)
+|||++..
T Consensus 295 ~L~v~~~~ 302 (322)
T 2fp8_A 295 LLYIGTLF 302 (322)
T ss_dssp EEEEECSS
T ss_pred EEEEeecC
Confidence 99997644
No 4
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.92 E-value=5.8e-23 Score=187.28 Aligned_cols=242 Identities=17% Similarity=0.123 Sum_probs=166.1
Q ss_pred CcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 48 SFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
..+||+++|+++|++|+++..+++|+++|+ +++ .. .+...+ ..|+||++++ +|+|||+. ...+.
T Consensus 31 ~~~pegia~~~~g~lyv~d~~~~~I~~~d~-~g~-----~~--~~~~~~----~~p~gia~~~-dG~l~vad--~~~~~- 94 (306)
T 2p4o_A 31 NTFLENLASAPDGTIFVTNHEVGEIVSITP-DGN-----QQ--IHATVE----GKVSGLAFTS-NGDLVATG--WNADS- 94 (306)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC-----EE--EEEECS----SEEEEEEECT-TSCEEEEE--ECTTS-
T ss_pred CCCcceEEECCCCCEEEEeCCCCeEEEECC-CCc-----eE--EEEeCC----CCceeEEEcC-CCcEEEEe--ccCCc-
Confidence 368999999999998888888899999985 455 12 133222 3789999997 78899954 32211
Q ss_pred ceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEe-cCCccccccccccccc
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSII-RSPLFTAKEWYKNVFG 206 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~-~~~~~~~~~~~~~~~~ 206 (335)
.+|+++|..++++....... ....++++++.+++++|++|+.+++||++|+++....++ ..+.+........+..
T Consensus 95 ~~v~~~d~~~g~~~~~~~~~----~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~ 170 (306)
T 2p4o_A 95 IPVVSLVKSDGTVETLLTLP----DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 170 (306)
T ss_dssp CEEEEEECTTSCEEEEEECT----TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred ceEEEEcCCCCeEEEEEeCC----CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCc
Confidence 25999998888776444431 145688999888889999999999999999985422211 1111110011123457
Q ss_pred cCeEEEccCC-eEEEEECCCCEEEEEeCCC-Cc-eeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 207 LNGIVYHPDG-FLIVIHMCSGNLFKIDIRK-EE-EEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 207 p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~-~~-~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
|||| ++|| +|||+++.+++|++|+++. ++ ...+.+.. +..|+||++|++|++||++...+++.+++.. +
T Consensus 171 pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-----~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G 242 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-----QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-R 242 (306)
T ss_dssp EEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-----SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-C
T ss_pred CCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-----cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-C
Confidence 9998 7777 8999999999999999975 21 12233321 2459999999999999998766788877653 3
Q ss_pred cEEEEEeeeecCCCCCcceEEEEe-----CCeEEEEeccCCC
Q 039428 284 WETASVVAKFNGPTHRVATAATVK-----DGRVYLSHLLGLG 320 (335)
Q Consensus 284 ~~~~~~~~~~~~p~~~~Pt~va~~-----~g~lyV~~~~~~~ 320 (335)
+. ..+..+..+ ...|+++++. +++|||++..+..
T Consensus 243 -~~-~~~~~~~~~-~~~p~~~a~~g~~~d~~~LyVt~~~~~~ 281 (306)
T 2p4o_A 243 -ST-TIIAQAEQG-VIGSTAVAFGQTEGDCTAIYVVTNGGMF 281 (306)
T ss_dssp -CE-EEEECGGGT-CTTEEEEEECCSTTTTTEEEEEECTTSS
T ss_pred -CE-EEEeecccc-cCCceEEEEecccCCCCEEEEECCCCcc
Confidence 11 112233333 4669999995 3789997765443
No 5
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.91 E-value=1.7e-21 Score=175.75 Aligned_cols=238 Identities=10% Similarity=0.111 Sum_probs=165.6
Q ss_pred CCCceeEEEcCCCcceeeeEEcCCCC-EEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCe
Q 039428 36 KPATHVYQYHSPSFLCETAKWDDVGR-RFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNR 114 (335)
Q Consensus 36 d~~~~~~~~~~~~~~pegia~d~~g~-~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~ 114 (335)
+.....-.+.....+||+++|+++|+ +|+++..+++|+++++. +.. . .+ ..+. ..|.+|++++ +|+
T Consensus 15 ~~~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~-~~~-----~--~~-~~~~---~~~~~l~~~~-dg~ 81 (296)
T 3e5z_A 15 PAGAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDD-GQL-----S--PE-MHPS---HHQNGHCLNK-QGH 81 (296)
T ss_dssp CTTCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETT-SCE-----E--EE-ESSC---SSEEEEEECT-TCC
T ss_pred CCCCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECC-CCe-----E--EE-ECCC---CCcceeeECC-CCc
Confidence 33333334445567899999999998 77777888999999954 431 2 13 2222 4689999997 889
Q ss_pred EEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeC-----------------CCCeE
Q 039428 115 LLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDV-----------------VSSKI 177 (335)
Q Consensus 115 l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~-----------------~~~~I 177 (335)
+|++. ... ..|.+||+++++........ .......|+++++|++|++|++|+ ..+.|
T Consensus 82 l~v~~--~~~---~~i~~~d~~~g~~~~~~~~~-~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l 155 (296)
T 3e5z_A 82 LIACS--HGL---RRLERQREPGGEWESIADSF-EGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWV 155 (296)
T ss_dssp EEEEE--TTT---TEEEEECSTTCCEEEEECEE-TTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEE
T ss_pred EEEEe--cCC---CeEEEEcCCCCcEEEEeecc-CCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEE
Confidence 99953 322 36999999777765332211 112257899999999999999975 24699
Q ss_pred EEEccCCcEEEEecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCcee---EEEEeccCCcCCCCC
Q 039428 178 WKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEE---VKLIELRGGSSLSLG 254 (335)
Q Consensus 178 ~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~---~~~~~~~g~~~~~~p 254 (335)
++++++++...... ....|+|++++|||.+++++..+++|++++++..+.. .+.+ . . ....|
T Consensus 156 ~~~~~~g~~~~~~~-----------~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~-~--~~~~p 220 (296)
T 3e5z_A 156 FRLAPDGTLSAPIR-----------DRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-T-V--EPGKT 220 (296)
T ss_dssp EEECTTSCEEEEEC-----------CCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-C-C--SSSCC
T ss_pred EEECCCCCEEEeec-----------CCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-e-C--CCCCC
Confidence 99999876544321 1235899999999965599999999999998732102 2333 2 1 13569
Q ss_pred CeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe---CCeEEEEec
Q 039428 255 DGLALLSPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATVK---DGRVYLSHL 316 (335)
Q Consensus 255 dGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~---~g~lyV~~~ 316 (335)
+||++|++|++|++.. +++.+++.. + +....+..|.. |+++++. +++|||+..
T Consensus 221 ~~i~~d~~G~l~v~~~--~~v~~~~~~-g----~~~~~~~~~~~--~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 221 DGLRVDAGGLIWASAG--DGVHVLTPD-G----DELGRVLTPQT--TSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp CSEEEBTTSCEEEEET--TEEEEECTT-S----CEEEEEECSSC--CCEEEEESTTSCEEEEEET
T ss_pred CeEEECCCCCEEEEcC--CeEEEECCC-C----CEEEEEECCCC--ceeEEEECCCCCEEEEEcC
Confidence 9999999999999984 778877753 3 23344444543 7899994 357999764
No 6
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.90 E-value=6.9e-22 Score=181.78 Aligned_cols=247 Identities=14% Similarity=0.121 Sum_probs=165.0
Q ss_pred cceeeeEEcCCCCEEEEEecC------------------------CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcc
Q 039428 49 FLCETAKWDDVGRRFLVSFLD------------------------GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATM 104 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~------------------------~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~ 104 (335)
-.|.++|++++|++|+++..+ ++|+++|..+++ ++. ..... ....|.
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~----~~~---~~~~~--~~~~p~ 94 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE----ILQ---SSGKN--LFYLPH 94 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC----EEE---EECTT--TCSSEE
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe----EEe---ccCCC--ccCCce
Confidence 368999999999998877544 479999864455 121 21111 124799
Q ss_pred eEEEeCCCCeEEEEEecCCCCccceEEEEECCCCe-EEEEeec-CCC---ccCCCCCCceeECC-CCcEEEEeC-CCCeE
Q 039428 105 GIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWK-RLFLTQL-SGK---SEEKSTADDIAVDA-EGNAYVTDV-VSSKI 177 (335)
Q Consensus 105 Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~-~~~~~~~-~~~---~~~~~~p~~~~vd~-~G~lyV~d~-~~~~I 177 (335)
||++|+ +|+|||+ |... ++|.+||+++.. ....... ..+ ...+..|+++++|+ +|++||+|+ .+++|
T Consensus 95 gia~d~-~g~l~v~--d~~~---~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 95 GLSIDT-DGNYWVT--DVAL---HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRI 168 (329)
T ss_dssp EEEECT-TSCEEEE--ETTT---TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEE
T ss_pred EEEECC-CCCEEEE--ECCC---CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeE
Confidence 999997 7889994 5543 369999987652 2222211 000 11267899999999 799999997 79999
Q ss_pred EEEccCCcEEEEecCCccccccccccccccCeEEEccC-CeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCC-
Q 039428 178 WKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPD-GFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGD- 255 (335)
Q Consensus 178 ~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~d-g~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pd- 255 (335)
++++++|+....++............+..|+||+++++ |+|||++..+++|.+++++.++ ....+...+ . -..|.
T Consensus 169 ~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~-~~~~~~~~~-~-~~~~~~ 245 (329)
T 3fvz_A 169 VQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE-FVREIKHAS-F-GRNVFA 245 (329)
T ss_dssp EEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC-EEEEECCTT-T-TTCEEE
T ss_pred EEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc-EEEEEeccc-c-CCCcce
Confidence 99999998877553211000000123456999999998 7999999999999999998442 555554322 1 12244
Q ss_pred -----eEEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeec--CCCCCcceEEEEe-CCeEEEEecc
Q 039428 256 -----GLALLSPTKLVVAGNPYPSARLVESSDGWETASVVAKFN--GPTHRVATAATVK-DGRVYLSHLL 317 (335)
Q Consensus 256 -----Gia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~--~p~~~~Pt~va~~-~g~lyV~~~~ 317 (335)
|++++.+|++|+++...+.+.+++...+ +++..+. ...+..|.+++++ +|+|||++..
T Consensus 246 ~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g----~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~ 311 (329)
T 3fvz_A 246 ISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSG----EIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAH 311 (329)
T ss_dssp EEEETTEEEEEECCCCTTCSCCCCEEEEETTTC----CEEEEECCSSSCCSSEEEEEECTTSEEEEEESS
T ss_pred eeecCCEEEEeCCCEEeccCCCcEEEEEEcCCC----eEEEEEcCCCCccCCeeEEEECCCCCEEEEECC
Confidence 4445556667766554457888876655 2233331 2346779999997 7899998754
No 7
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.90 E-value=6.6e-21 Score=170.79 Aligned_cols=234 Identities=12% Similarity=0.060 Sum_probs=165.9
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCC---cCCCCcceEEEeCCCCeEEEEEecCCCC
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDD---VVGNATMGIAVDRPRNRLLVAFTDVLGN 125 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~---~~~~~p~Gi~~d~~~g~l~v~~~D~~~~ 125 (335)
..|.+++++++|++|+++..+++|.++|. +++. +. .+...+ .....|.++++++.++++||+. ....
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~-~g~~----~~---~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~--~~~~ 99 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDK-EGRF----KF---QFGECGKRDSQLLYPNRVAVVRNSGDIIVTE--RSPT 99 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECT-TSCE----EE---EECCBSSSTTCBSSEEEEEEETTTTEEEEEE--CGGG
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECC-CCcE----EE---EecccCCCcccccCceEEEEEcCCCeEEEEc--CCCC
Confidence 47999999999998877777899999985 4551 22 111111 0114689999964589999963 2111
Q ss_pred ccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCcccccccccccc
Q 039428 126 KYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVF 205 (335)
Q Consensus 126 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~ 205 (335)
..|.+||.++ +....... .....|+++++|++|++||++..+++|++++++|+....+... ....
T Consensus 100 --~~i~~~d~~g-~~~~~~~~----~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~--------~~~~ 164 (286)
T 1q7f_A 100 --HQIQIYNQYG-QFVRKFGA----TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCS--------KHLE 164 (286)
T ss_dssp --CEEEEECTTS-CEEEEECT----TTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECT--------TTCS
T ss_pred --CEEEEECCCC-cEEEEecC----ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCC--------CccC
Confidence 4699999654 44322222 1256899999999999999999999999999998876644321 1234
Q ss_pred ccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCC-eEEEEEcCCCc
Q 039428 206 GLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYP-SARLVESSDGW 284 (335)
Q Consensus 206 ~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~-~~~v~~~~~~~ 284 (335)
.|++|+++++|++|+++..+++|++++.++. ....+...+ . +..|.++++|++|++||++...+ .+.+++.. +.
T Consensus 165 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~--~~~~~~~~g-~-~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~ 239 (286)
T 1q7f_A 165 FPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ--YLRQIGGEG-I-TNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQ 239 (286)
T ss_dssp SEEEEEECSSSEEEEEEGGGTEEEEEETTCC--EEEEESCTT-T-SCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SC
T ss_pred CcEEEEECCCCCEEEEECCCCEEEEEcCCCC--EEEEEccCC-c-cCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CC
Confidence 5999999999999999999999999999775 555554333 1 46799999999999999987555 78877643 31
Q ss_pred EEEEEeeeecCCCCCcceEEEEe-CCeEEEEe
Q 039428 285 ETASVVAKFNGPTHRVATAATVK-DGRVYLSH 315 (335)
Q Consensus 285 ~~~~~~~~~~~p~~~~Pt~va~~-~g~lyV~~ 315 (335)
....... ......|.+++++ +|+|||++
T Consensus 240 -~~~~~~~--~~~~~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 240 -LISALES--KVKHAQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp -EEEEEEE--SSCCSCEEEEEEETTTEEEEEE
T ss_pred -EEEEEcc--cCCCCcceeEEECCCCcEEEEC
Confidence 1111111 1123457899997 89999985
No 8
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.89 E-value=6e-21 Score=170.14 Aligned_cols=219 Identities=15% Similarity=0.139 Sum_probs=154.4
Q ss_pred cceeeeEEcCCCC-EEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 49 FLCETAKWDDVGR-RFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 49 ~~pegia~d~~g~-~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
..|++++||++++ +|+++..+++|++++. ++.. .. .++ ..+. ..|++|++|+.+++||++ |...
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~-~g~~----~~--~~~-~~~~--~~p~~ia~d~~~~~lyv~--d~~~--- 100 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASL-HGGE----PT--TII-RQDL--GSPEGIALDHLGRTIFWT--DSQL--- 100 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEES-SSCC----CE--EEE-CTTC--CCEEEEEEETTTTEEEEE--ETTT---
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEec-CCCC----cE--EEE-ECCC--CCccEEEEEecCCeEEEE--ECCC---
Confidence 4689999999655 5555577899999995 4542 12 132 2222 479999999867899995 5443
Q ss_pred ceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC-CCcEEEEeCC--CCeEEEEccCCcEEEEecCCccccccccccc
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVV--SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNV 204 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~--~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~ 204 (335)
++|.++|+++........ .+...|+++++|+ +|++|++|.. +++|++++.+|+..+.+... ..
T Consensus 101 ~~I~~~~~~g~~~~~~~~-----~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~---------~~ 166 (267)
T 1npe_A 101 DRIEVAKMDGTQRRVLFD-----TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD---------NL 166 (267)
T ss_dssp TEEEEEETTSCSCEEEEC-----SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT---------TC
T ss_pred CEEEEEEcCCCCEEEEEE-----CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC---------CC
Confidence 469999998654332221 1257899999999 4789999987 68999999998654433211 23
Q ss_pred cccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 205 FGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 205 ~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
..|+||++++++ +||+++..+++|+++++++. ....+. .+ +..|+||++| ++.+|+++...+++.+++...+
T Consensus 167 ~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~--~~~~~~-~~---~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 167 GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP--GRRKVL-EG---LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTEE--EEEEEE-EC---CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTT
T ss_pred CCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC--ceEEEe-cC---CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCC
Confidence 459999999976 99999999999999999875 333332 12 3569999998 6899999887788888886554
Q ss_pred cEEEEEeeeecCCCCCcceEEEEe
Q 039428 284 WETASVVAKFNGPTHRVATAATVK 307 (335)
Q Consensus 284 ~~~~~~~~~~~~p~~~~Pt~va~~ 307 (335)
+....+.......|.++++.
T Consensus 240 ----~~~~~i~~g~~~~p~gi~~~ 259 (267)
T 1npe_A 240 ----KEMDTFHPHKQTRLYGITIA 259 (267)
T ss_dssp ----EEEEEECCSSCCCCCCEEEE
T ss_pred ----CceEEEccccccccceeeec
Confidence 22333322222347888875
No 9
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.89 E-value=7.2e-21 Score=174.48 Aligned_cols=230 Identities=17% Similarity=0.103 Sum_probs=157.4
Q ss_pred hhhhhhhhhhcCCCcee-EEEcCCCcceeeeEEcCCCC-EEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCC
Q 039428 25 IISIELAIAMAKPATHV-YQYHSPSFLCETAKWDDVGR-RFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNA 102 (335)
Q Consensus 25 ~~~~~~~~~~~d~~~~~-~~~~~~~~~pegia~d~~g~-~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~ 102 (335)
+++....|...+..... ..+......|++++||++++ +||++..+++|++++. ++...+...+ .++ ..++ ..
T Consensus 5 l~~~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~-~g~~~~~~~~--~~~-~~~~--~~ 78 (316)
T 1ijq_A 5 FFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQL-DRAHGVSSYD--TVI-SRDI--QA 78 (316)
T ss_dssp EEECBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC---------CE--EEE-CSSC--SC
T ss_pred EEECCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEEC-CCCCCCcccE--EEE-eCCC--CC
Confidence 44555566666555433 22223345799999998654 5555577899999985 4410000011 122 1222 47
Q ss_pred cceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC-CCcEEEEeCCC-CeEEEE
Q 039428 103 TMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVVS-SKIWKV 180 (335)
Q Consensus 103 p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~-~~I~~~ 180 (335)
|.||++|+.+++||++ |... +.|.++|+++......... ....|+++++|| +|++|++|+.. ++|+++
T Consensus 79 p~glavd~~~~~ly~~--d~~~---~~I~~~~~~g~~~~~~~~~-----~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~ 148 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWT--DSVL---GTVSVADTKGVKRKTLFRE-----NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 148 (316)
T ss_dssp CCEEEEETTTTEEEEE--ETTT---TEEEEEETTSSSEEEEEEC-----TTCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred cCEEEEeecCCeEEEE--ECCC---CEEEEEeCCCCceEEEEEC-----CCCCcceEEeCCCCCEEEEEccCCCCeEEEE
Confidence 8999999768899994 5543 3699999987654433221 257899999998 57899999876 899999
Q ss_pred ccCCcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEE
Q 039428 181 GVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLAL 259 (335)
Q Consensus 181 d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~ 259 (335)
+++|+..+.+... ....|+||++++++ +||++|..+++|+++++++. ..+.+...+ ..+..|+||++
T Consensus 149 ~~dG~~~~~~~~~---------~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~--~~~~~~~~~-~~~~~P~giav 216 (316)
T 1ijq_A 149 GLNGVDIYSLVTE---------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILEDE-KRLAHPFSLAV 216 (316)
T ss_dssp ETTSCCEEEEECS---------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEEECT-TTTSSEEEEEE
T ss_pred cCCCCCeEEEEEC---------CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC--ceEEEeecC-CccCCcEEEEE
Confidence 9999876544221 23459999999865 99999999999999999976 344443222 12567999999
Q ss_pred cCCCcEEEEecCCCeEEEEEcCCC
Q 039428 260 LSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 260 d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
+ ++.+|+++++.+++.+++..++
T Consensus 217 ~-~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 217 F-EDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp E-TTEEEEEETTTTEEEEEETTTC
T ss_pred E-CCEEEEEECCCCeEEEEeCCCC
Confidence 8 4899999887777877775444
No 10
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.89 E-value=4.2e-21 Score=178.55 Aligned_cols=240 Identities=15% Similarity=0.139 Sum_probs=162.6
Q ss_pred hhhhhhhhcCCCceeEEE-cCCCcceeeeEEcCCC-CEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcc
Q 039428 27 SIELAIAMAKPATHVYQY-HSPSFLCETAKWDDVG-RRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATM 104 (335)
Q Consensus 27 ~~~~~~~~~d~~~~~~~~-~~~~~~pegia~d~~g-~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~ 104 (335)
+....|...+.....+.. ......|.+++||+++ .+||++...++|++++. ++.. .+ .++ ..+. ..|.
T Consensus 50 ~~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~-~g~~----~~--~~~-~~~~--~~p~ 119 (349)
T 3v64_C 50 ANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANL-NGSN----VE--EVV-STGL--ESPG 119 (349)
T ss_dssp ECBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEET-TSCS----CE--EEE-CSSC--SCCC
T ss_pred ecccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEec-CCCC----ce--EEE-eCCC--CCcc
Confidence 334445444444333222 2233469999999754 45555578899999985 4542 12 133 2222 3789
Q ss_pred eEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC-CCcEEEEeCCC-CeEEEEcc
Q 039428 105 GIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVVS-SKIWKVGV 182 (335)
Q Consensus 105 Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~-~~I~~~d~ 182 (335)
||++|+.+++||++ |... +.|.++++++........ ..+..|+++++|| +|.+|++|+.. ++|+++++
T Consensus 120 glavd~~~g~ly~~--d~~~---~~I~~~~~dG~~~~~l~~-----~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~ 189 (349)
T 3v64_C 120 GLAVDWVHDKLYWT--DSGT---SRIEVANLDGAHRKVLLW-----QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 189 (349)
T ss_dssp EEEEETTTTEEEEE--ETTT---TEEEEEETTSCSCEEEEC-----TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEEEecCCCeEEEE--cCCC---CeEEEEcCCCCceEEEEe-----CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeC
Confidence 99999778999994 5543 369999998764332221 1267899999998 57899999998 99999999
Q ss_pred CCcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcC
Q 039428 183 EGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLS 261 (335)
Q Consensus 183 ~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~ 261 (335)
+|...+.+... ....||||++|+++ +||++|..+++|+++++++. ..+.+...+ +..|+||+++
T Consensus 190 dG~~~~~~~~~---------~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~--~~~~~~~~~---~~~P~giav~- 254 (349)
T 3v64_C 190 DGSGRRIIADT---------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS--HRKAVISQG---LPHPFAITVF- 254 (349)
T ss_dssp TSCSCEESCCS---------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEECSS---CSSEEEEEEE-
T ss_pred CCCCcEEEEEC---------CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC--ceEEEEeCC---CCCceEEEEE-
Confidence 98765543211 23459999999855 99999999999999999986 333332222 5679999995
Q ss_pred CCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEE
Q 039428 262 PTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATV 306 (335)
Q Consensus 262 ~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~ 306 (335)
++.+|+++++.+++..++..++.....+.. ....|+++++
T Consensus 255 ~~~ly~td~~~~~V~~~~~~~G~~~~~i~~-----~~~~p~gi~v 294 (349)
T 3v64_C 255 EDSLYWTDWHTKSINSANKFTGKNQEIIRN-----KLHFPMDIHT 294 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCSCEEEEC-----SCSCCCCEEE
T ss_pred CCEEEEecCCCCeEEEEEccCCCccEEecc-----CCCCCceEEE
Confidence 679999988777887776444422222221 2345778877
No 11
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.89 E-value=3.2e-21 Score=170.93 Aligned_cols=227 Identities=14% Similarity=0.198 Sum_probs=159.0
Q ss_pred ceeeeEEcCCCCEEE-EEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 50 LCETAKWDDVGRRFL-VSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 50 ~pegia~d~~g~~~~-~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
.|++++++++|++|+ .+..+++|++++. ++.. .. ...... ...|.+|++++ +|+||++ +. . +
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~-~~~~----~~---~~~~~~--~~~p~~i~~~~-~g~l~v~--~~-~---~ 87 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLAT-GSTG----TT---VLPFNG--LYQPQGLAVDG-AGTVYVT--DF-N---N 87 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC----------E---ECCCCS--CCSCCCEEECT-TCCEEEE--ET-T---T
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecC-CCcc----cc---eEeeCC--cCCcceeEECC-CCCEEEE--cC-C---C
Confidence 899999999999777 4367889999985 3331 11 221121 24789999997 7889995 33 2 4
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccC
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~ 208 (335)
.|.+||++++.... ... .+...|+++++|++|++||++..+++|++++..+....... . .....|+
T Consensus 88 ~i~~~d~~~~~~~~-~~~----~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~---~------~~~~~p~ 153 (270)
T 1rwi_B 88 RVVTLAAGSNNQTV-LPF----DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP---F------TGLNDPD 153 (270)
T ss_dssp EEEEECTTCSCCEE-CCC----CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC---C------CSCCSCC
T ss_pred EEEEEeCCCceEee-eec----CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec---c------ccCCCce
Confidence 69999998765432 111 12468999999999999999999999999986643322110 0 1234599
Q ss_pred eEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEEE
Q 039428 209 GIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETAS 288 (335)
Q Consensus 209 Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~ 288 (335)
+|+++++|+||+++..+++|++++.++. ........+ +..|.++++|++|++|+++...+.+.+++...... .
T Consensus 154 ~i~~~~~g~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~---~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~--~ 226 (270)
T 1rwi_B 154 GVAVDNSGNVYVTDTDNNRVVKLEAESN--NQVVLPFTD---ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS--T 226 (270)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEECTTTC--CEEECCCSS---CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC--E
T ss_pred eEEEeCCCCEEEEECCCCEEEEEecCCC--ceEeecccC---CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc--e
Confidence 9999999999999999999999999886 333222211 46699999999999999987557788777543211 1
Q ss_pred EeeeecCCCCCcceEEEEe-CCeEEEEecc
Q 039428 289 VVAKFNGPTHRVATAATVK-DGRVYLSHLL 317 (335)
Q Consensus 289 ~~~~~~~p~~~~Pt~va~~-~g~lyV~~~~ 317 (335)
. ........|.+++++ +|+|||++..
T Consensus 227 ~---~~~~~~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 227 V---LPFTGLNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp E---CCCCSCSCEEEEEECTTCCEEEEEGG
T ss_pred e---eccCCCCCceeEEECCCCCEEEEECC
Confidence 1 111224568999996 7899998654
No 12
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.89 E-value=8.8e-21 Score=172.44 Aligned_cols=230 Identities=17% Similarity=0.214 Sum_probs=159.1
Q ss_pred EEcCCCcceeeeEEcCCCC-EEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEec
Q 039428 43 QYHSPSFLCETAKWDDVGR-RFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTD 121 (335)
Q Consensus 43 ~~~~~~~~pegia~d~~g~-~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D 121 (335)
.+.....++||++|+++|+ +||++..+++|+++++ +++ .. .+. .+. ..++++++|+ +|+||++.
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-----~~--~~~-~~~---~~~~gl~~d~-dG~l~v~~-- 103 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-----VD--VLL-DAT---AFTNGNAVDA-QQRLVHCE-- 103 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-----EE--EEE-ESC---SCEEEEEECT-TSCEEEEE--
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-----EE--EEe-CCC---CccceeeECC-CCCEEEEE--
Confidence 3445556899999999998 6666688899999985 565 22 132 222 3689999997 78999953
Q ss_pred CCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeC-----------------CCCeEEEEccC-
Q 039428 122 VLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDV-----------------VSSKIWKVGVE- 183 (335)
Q Consensus 122 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~-----------------~~~~I~~~d~~- 183 (335)
... ..|.++|++ ++........ .+...+.|+++++|++|++|++|. ..+.|++++++
T Consensus 104 ~~~---~~v~~~~~~-g~~~~~~~~~-~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~ 178 (305)
T 3dr2_A 104 HGR---RAITRSDAD-GQAHLLVGRY-AGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG 178 (305)
T ss_dssp TTT---TEEEEECTT-SCEEEEECEE-TTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS
T ss_pred CCC---CEEEEECCC-CCEEEEEecc-CCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCC
Confidence 222 359999987 5444222211 122367899999999999999974 13689999995
Q ss_pred CcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCC-----CEEEEEeCCCCc-eeEEEEeccCCcCCCCCCe
Q 039428 184 GQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCS-----GNLFKIDIRKEE-EEVKLIELRGGSSLSLGDG 256 (335)
Q Consensus 184 g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~-----~~v~~~d~~~~~-~~~~~~~~~g~~~~~~pdG 256 (335)
|+...+. . ...|||++++||| .||++++.. ++|++++.++++ ...+.+.... ...|+|
T Consensus 179 g~~~~~~---~---------~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~---~~~pdg 243 (305)
T 3dr2_A 179 SPLQRMA---D---------LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVP---DGLPDG 243 (305)
T ss_dssp CCCEEEE---E---------ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCS---SSCCCS
T ss_pred CcEEEEe---c---------CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECC---CCCCCe
Confidence 4443321 1 2358999999999 699999874 899999988652 0122222111 356999
Q ss_pred EEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe--CCeEEEEec
Q 039428 257 LALLSPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATVK--DGRVYLSHL 316 (335)
Q Consensus 257 ia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~--~g~lyV~~~ 316 (335)
|++|++|+||++.. +++.+++. ++ +....+..|. .|+++++. +++|||+..
T Consensus 244 i~~d~~G~lwv~~~--~gv~~~~~-~g----~~~~~~~~~~--~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 244 FCVDRGGWLWSSSG--TGVCVFDS-DG----QLLGHIPTPG--TASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp EEECTTSCEEECCS--SEEEEECT-TS----CEEEEEECSS--CCCEEEECTTSCEEEEEET
T ss_pred EEECCCCCEEEecC--CcEEEECC-CC----CEEEEEECCC--ceeEEEEeCCCCEEEEEcC
Confidence 99999999999985 56777765 33 2334444444 37889994 678999764
No 13
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.88 E-value=5.8e-21 Score=180.00 Aligned_cols=241 Identities=15% Similarity=0.130 Sum_probs=163.3
Q ss_pred hhhhhhhhcCCCceeEE-EcCCCcceeeeEEcCCC-CEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcc
Q 039428 27 SIELAIAMAKPATHVYQ-YHSPSFLCETAKWDDVG-RRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATM 104 (335)
Q Consensus 27 ~~~~~~~~~d~~~~~~~-~~~~~~~pegia~d~~g-~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~ 104 (335)
+....|...+.....+. +......|++++||+++ .+||++...++|++++. ++.. .+ .++ ..+. ..|.
T Consensus 93 ~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~-~g~~----~~--~~~-~~~~--~~p~ 162 (386)
T 3v65_B 93 ANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANL-NGSN----VE--EVV-STGL--ESPG 162 (386)
T ss_dssp ECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEET-TSCC----EE--EEE-CSSC--SCCC
T ss_pred ecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEec-CCCC----cE--EEE-eCCC--CCcc
Confidence 33444544554443322 22233469999999754 45555588899999985 4542 22 133 2222 3789
Q ss_pred eEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCC-CcEEEEeCCC-CeEEEEcc
Q 039428 105 GIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE-GNAYVTDVVS-SKIWKVGV 182 (335)
Q Consensus 105 Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~-G~lyV~d~~~-~~I~~~d~ 182 (335)
||++|+.+++||+ +|... ++|.++++++........ .++..|+++++||+ |++|++|+.. ++|+++++
T Consensus 163 glavd~~~g~lY~--~d~~~---~~I~~~~~dg~~~~~l~~-----~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 163 GLAVDWVHDKLYW--TDSGT---SRIEVANLDGAHRKVLLW-----QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp CEEEETTTTEEEE--EETTT---TEEEECBTTSCSCEEEEC-----SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEEEEeCCCeEEE--EcCCC---CeEEEEeCCCCceEEeec-----CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 9999977899999 45543 359999998764332221 12678999999975 7899999988 99999999
Q ss_pred CCcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcC
Q 039428 183 EGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLS 261 (335)
Q Consensus 183 ~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~ 261 (335)
+|...+.+... ....|+||++++++ +||++|..+++|+++++++. ..+.+...+ +..|+||+++
T Consensus 233 dG~~~~~~~~~---------~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~--~~~~~~~~~---~~~P~giav~- 297 (386)
T 3v65_B 233 DGSGRRIIADT---------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS--HRKAVISQG---LPHPFAITVF- 297 (386)
T ss_dssp TSCSCEEEECS---------SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC--SCEEEECSS---CSSEEEEEEE-
T ss_pred CCCCcEEEEEC---------CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC--eeEEEEECC---CCCceEEEEE-
Confidence 98765443221 23459999999755 99999999999999999876 333332222 5679999995
Q ss_pred CCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe
Q 039428 262 PTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATVK 307 (335)
Q Consensus 262 ~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~ 307 (335)
++.+|++++..+++.+++..++.....+.. + ...|+++++.
T Consensus 298 ~~~ly~td~~~~~V~~~~~~~G~~~~~i~~----~-~~~p~gi~v~ 338 (386)
T 3v65_B 298 EDSLYWTDWHTKSINSANKFTGKNQEIIRN----K-LHFPMDIHTL 338 (386)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCSCEEEEC----S-CSCCCCEEEE
T ss_pred CCEEEEeeCCCCeEEEEECCCCcceEEEcc----C-CCCCceEEEE
Confidence 579999988777787776444422222221 2 3457788773
No 14
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.88 E-value=3.9e-20 Score=175.62 Aligned_cols=242 Identities=13% Similarity=0.089 Sum_probs=165.0
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
.|.+++||++|++|+++..+++|+++|..++. +. .+... +..+. ++++++++.||++ |..+. ..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~-----~~--~~~~~----~~~~~-ia~~~~g~~l~~~--d~~~~--~~ 195 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK-----VT--TVHPG----FKGGK-PAVTKDKQRVYSI--GWEGT--HT 195 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTE-----EE--EEEET----CCBCB-CEECTTSSEEEEE--BSSTT--CE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCE-----EE--Eeecc----CCCCc-eeEecCCCcEEEE--ecCCC--ce
Confidence 69999999999988888778999999964343 22 13322 23566 9999866678884 44322 26
Q ss_pred EEEEECCCCeEE-EEeecCCCccCCCCCCceeECC-CCcEEEEeCCCCeEEEEccCCcEEEEecCCcccccccccccccc
Q 039428 130 LAAYDLSTWKRL-FLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGL 207 (335)
Q Consensus 130 v~~~d~~~~~~~-~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p 207 (335)
|+++|..++... ...... ......|+++++|+ +|++|+++. +++|+++|+++.....+....... .....|
T Consensus 196 I~~~d~~~~~~~~~~g~~~--~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g----~~~~~P 268 (409)
T 3hrp_A 196 VYVYMKASGWAPTRIGQLG--STFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSG----SLGTNP 268 (409)
T ss_dssp EEEEEGGGTTCEEEEEECC--TTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCCS----CCCCSS
T ss_pred EEEEEcCCCceeEEeeecc--chhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEecccccC----CCCCCc
Confidence 999999866432 111221 11267899999999 689999876 789999999866544331100110 011234
Q ss_pred C-eEEEcc-CCeEEEEECCCCEEEEEeCCCCceeEEEEecc---C-------CcCCCCCCeEEEcCCCcEEEEec-CCCe
Q 039428 208 N-GIVYHP-DGFLIVIHMCSGNLFKIDIRKEEEEVKLIELR---G-------GSSLSLGDGLALLSPTKLVVAGN-PYPS 274 (335)
Q Consensus 208 ~-Gia~~~-dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~---g-------~~~~~~pdGia~d~~g~l~va~~-~~~~ 274 (335)
. +|+++| +++||+++..+++|++++.++. ........ + ...+..|+||++|++|+||+++. ..++
T Consensus 269 ~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~ 346 (409)
T 3hrp_A 269 GPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYC 346 (409)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCE
T ss_pred cccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCE
Confidence 4 999999 4799999999999999999875 22222211 0 01256799999999999999988 7788
Q ss_pred EEEEEcCCCcEEEEEeeee------c----CCCCCcceEEEEe-CCeEEEEecc
Q 039428 275 ARLVESSDGWETASVVAKF------N----GPTHRVATAATVK-DGRVYLSHLL 317 (335)
Q Consensus 275 ~~v~~~~~~~~~~~~~~~~------~----~p~~~~Pt~va~~-~g~lyV~~~~ 317 (335)
+++++..++ ....+.+.- . ...+..|.+++++ +|+|||++..
T Consensus 347 I~~~~~~~G-~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~ 399 (409)
T 3hrp_A 347 LRKLDILDG-YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAW 399 (409)
T ss_dssp EEEEETTTT-EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEEST
T ss_pred EEEEECCCC-EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECC
Confidence 888875555 222333320 0 0126789999997 7999998754
No 15
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.88 E-value=2.2e-20 Score=177.28 Aligned_cols=245 Identities=11% Similarity=0.005 Sum_probs=166.1
Q ss_pred hhhhhhhhhhhhhhhcCCCceeEEEc-----------CCCcceeeeEEcCCCCEEEEEec-CC-eEEEEECCCCCCCcce
Q 039428 20 IPIAYIISIELAIAMAKPATHVYQYH-----------SPSFLCETAKWDDVGRRFLVSFL-DG-GVGQVLVPDEYSPGTV 86 (335)
Q Consensus 20 ~p~~~~~~~~~~~~~~d~~~~~~~~~-----------~~~~~pegia~d~~g~~~~~~~~-~~-~I~~~d~~~g~~~~~v 86 (335)
.|.+++++.++.++++|...+++..- .....|. ++|+++|+.+|+... .+ +|++++.. +.+ .
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~-~~~---~ 206 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA-SGW---A 206 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG-GTT---C
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcC-CCc---e
Confidence 47777777777788887754444331 1233567 999999998888733 33 99999954 432 0
Q ss_pred eeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCC-ceeECC-C
Q 039428 87 LEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTAD-DIAVDA-E 164 (335)
Q Consensus 87 ~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~-~~~vd~-~ 164 (335)
.. .+-......+..|+++++++++++||+ +|.. +.|++||++++...........+.....|. ++++|+ +
T Consensus 207 ~~--~~g~~~~~~~~~p~~iav~p~~g~lyv--~d~~----~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~ 278 (409)
T 3hrp_A 207 PT--RIGQLGSTFSGKIGAVALDETEEWLYF--VDSN----KNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVD 278 (409)
T ss_dssp EE--EEEECCTTSCSCCCBCEECTTSSEEEE--ECTT----CEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTT
T ss_pred eE--EeeeccchhcCCcEEEEEeCCCCeEEE--EECC----CcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCC
Confidence 11 110111112357899999987899999 4542 469999998876543322211111123355 999999 5
Q ss_pred CcEEEEeCCCCeEEEEccCCcEEEEecCC---ccc-cccccccccccCeEEEccCCeEEEEEC-CCCEEEEEeCCCCcee
Q 039428 165 GNAYVTDVVSSKIWKVGVEGQLLSIIRSP---LFT-AKEWYKNVFGLNGIVYHPDGFLIVIHM-CSGNLFKIDIRKEEEE 239 (335)
Q Consensus 165 G~lyV~d~~~~~I~~~d~~g~~~~~~~~~---~~~-~~~~~~~~~~p~Gia~~~dg~Lyvad~-~~~~v~~~d~~~~~~~ 239 (335)
|++||+|+.+++|++++++|+...+++.. .+. .+.....+..|+||+++++|+|||+|. .+++|.++++..+ .
T Consensus 279 g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G--~ 356 (409)
T 3hrp_A 279 SNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG--Y 356 (409)
T ss_dssp TEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT--E
T ss_pred CEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC--E
Confidence 89999999999999999999866655432 111 011122356699999999999999999 9999999996555 4
Q ss_pred EEEEecc-CC----------cCCCCCCeEEEcCCCcEEEEecCCCeEEEEE
Q 039428 240 VKLIELR-GG----------SSLSLGDGLALLSPTKLVVAGNPYPSARLVE 279 (335)
Q Consensus 240 ~~~~~~~-g~----------~~~~~pdGia~d~~g~l~va~~~~~~~~v~~ 279 (335)
+..+... +. ..+..|+|+++|++|+|||++...++++.+.
T Consensus 357 v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 357 VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEE
T ss_pred EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEE
Confidence 4444321 10 1256799999999999999988667777665
No 16
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.88 E-value=3.1e-20 Score=171.86 Aligned_cols=250 Identities=17% Similarity=0.205 Sum_probs=163.2
Q ss_pred cceeeeEEcCCCCEEEEE-ec-CC--eEEEEECCCCCCCcceeeeeEEee---cCCcCCCCcceEEEeCCCCeEEEEEec
Q 039428 49 FLCETAKWDDVGRRFLVS-FL-DG--GVGQVLVPDEYSPGTVLEEVKLVK---EDDVVGNATMGIAVDRPRNRLLVAFTD 121 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~-~~-~~--~I~~~d~~~g~~~~~v~~~~~~~~---~~~~~~~~p~Gi~~d~~~g~l~v~~~D 121 (335)
..|++++++++|++|+.. .+ ++ +|++++ +++ +. ++.. ........|+||++|+ +|+|||+ |
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~--~g~-----~~--~~p~~~~~~~~~~~~p~gv~~d~-~g~L~v~--D 84 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT--QDG-----LI--PFPPQSGNAIITFDTVLGIKSDG-NGIVWML--D 84 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE--TTE-----EE--ESCCCCSSCCCCCSCEEEEEECS-SSEEEEE--E
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC--CCC-----ee--cCCCcccCcccceeEeeEEEEcC-CCcEEEE--c
Confidence 579999999999987775 33 34 899997 343 11 1211 1111125799999997 7999995 5
Q ss_pred CCC--CccceEEEEECCCCeEEEEeecCCC-ccCCCCCCceeECCC-CcEEEEeC---CCCeEEEEccC-CcEEEEecCC
Q 039428 122 VLG--NKYSALAAYDLSTWKRLFLTQLSGK-SEEKSTADDIAVDAE-GNAYVTDV---VSSKIWKVGVE-GQLLSIIRSP 193 (335)
Q Consensus 122 ~~~--~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~p~~~~vd~~-G~lyV~d~---~~~~I~~~d~~-g~~~~~~~~~ 193 (335)
... ....+|++||++++++.....++.. .....+|+++++|++ |.+||+|+ ..+.|+++|++ ++..+.+...
T Consensus 85 ~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~ 164 (343)
T 2qe8_A 85 NGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGY 164 (343)
T ss_dssp CHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTC
T ss_pred CCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCC
Confidence 431 0013699999999987655554321 122467899999975 78999999 88999999987 5555544220
Q ss_pred -cccc-------ccc-------cc----cccccCeEEEccCC-eEEEEECCCCEEEEEeCCC---Cc-e--e-EEEEecc
Q 039428 194 -LFTA-------KEW-------YK----NVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRK---EE-E--E-VKLIELR 246 (335)
Q Consensus 194 -~~~~-------~~~-------~~----~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~---~~-~--~-~~~~~~~ 246 (335)
.+.. .+. .. -..++|||+++||| .||+++..+++|++++.+. .. . . ...+...
T Consensus 165 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T 2qe8_A 165 PGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY 244 (343)
T ss_dssp TTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE
T ss_pred CcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec
Confidence 1100 000 00 11468999999999 8999999999999998642 10 0 0 0001111
Q ss_pred CCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe-CCeEEEEec
Q 039428 247 GGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATVK-DGRVYLSHL 316 (335)
Q Consensus 247 g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~-~g~lyV~~~ 316 (335)
+. ...|+||++|++|++|+++...+++.+++..++ +...+ ...|....|++++++ +|+|||++.
T Consensus 245 g~--~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G-~~~~~---~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 245 SE--KPICDGISIDKDHNIYVGDLAHSAIGVITSADR-AYKLL---VTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp EE--CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT-EEEEE---EECGGGSCEEEEEECTTSCEEEEEC
T ss_pred cc--CCCCceEEECCCCCEEEEccCCCeEEEEECCCC-CEEEE---EECCceecCCeeEECCCCcEEEEeC
Confidence 11 235999999999999999876677887776334 22122 123446779999996 899999553
No 17
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.87 E-value=2.5e-19 Score=160.44 Aligned_cols=244 Identities=9% Similarity=0.020 Sum_probs=171.1
Q ss_pred hcCCCceeEEEcCCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCC
Q 039428 34 MAKPATHVYQYHSPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRN 113 (335)
Q Consensus 34 ~~d~~~~~~~~~~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g 113 (335)
|......++.++.....|++++++++|++|+.+..++.|.++|+ +++ +.. + ..+. ....|.+|++++ +|
T Consensus 5 w~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~-~~~-----~~~--~-~~~~-~~~~~~~i~~~~-~g 73 (300)
T 2qc5_A 5 WMNFYLEEFNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQ-SGR-----IKE--F-EVPT-PDAKVMCLIVSS-LG 73 (300)
T ss_dssp GGSEEEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TSC-----EEE--E-ECSS-TTCCEEEEEECT-TS
T ss_pred ceeeeEEEEecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECC-CCc-----eEE--E-ECCC-CCCcceeEEECC-CC
Confidence 33333344555666678999999999998888777899999985 454 221 2 2222 124789999996 88
Q ss_pred eEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCC
Q 039428 114 RLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSP 193 (335)
Q Consensus 114 ~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~ 193 (335)
++|++. ... +.|.++|++ ++... ...+. . ...|+++++|++|++||++..++.|++++++++.....
T Consensus 74 ~l~v~~--~~~---~~v~~~d~~-g~~~~-~~~~~--~-~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~--- 140 (300)
T 2qc5_A 74 DIWFTE--NGA---NKIGKLSKK-GGFTE-YPLPQ--P-DSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYD--- 140 (300)
T ss_dssp CEEEEE--TTT---TEEEEECTT-SCEEE-EECSS--T-TCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEE---
T ss_pred CEEEEe--cCC---CeEEEECCC-CCeEE-ecCCC--C-CCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEcc---
Confidence 999953 322 359999998 55432 22211 1 46799999999999999999889999999997665421
Q ss_pred ccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCC
Q 039428 194 LFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYP 273 (335)
Q Consensus 194 ~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~ 273 (335)
+.. ....|++|+++++|+||+++..+++|++++.++. ...+.... . ...|.++++|++|++|+++...+
T Consensus 141 -~~~-----~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~---~~~~~~~~-~-~~~~~~i~~d~~g~l~v~~~~~~ 209 (300)
T 2qc5_A 141 -LPN-----KGSYPAFITLGSDNALWFTENQNNSIGRITNTGK---LEEYPLPT-N-AAAPVGITSGNDGALWFVEIMGN 209 (300)
T ss_dssp -CSS-----TTCCEEEEEECTTSSEEEEETTTTEEEEECTTCC---EEEEECSS-T-TCCEEEEEECTTSSEEEEETTTT
T ss_pred -CCC-----CCCCceeEEECCCCCEEEEecCCCeEEEECCCCc---EEEeeCCC-C-CCCcceEEECCCCCEEEEccCCC
Confidence 110 2345999999999999999999999999999543 33344332 1 45699999999999999976556
Q ss_pred eEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe-CCeEEEEecc
Q 039428 274 SARLVESSDGWETASVVAKFNGPTHRVATAATVK-DGRVYLSHLL 317 (335)
Q Consensus 274 ~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~-~g~lyV~~~~ 317 (335)
.+.+++. ++. .... .+. .....|.+++++ +|+|||+...
T Consensus 210 ~i~~~~~-~g~-~~~~--~~~-~~~~~~~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 210 KIGRITT-TGE-ISEY--DIP-TPNARPHAITAGKNSEIWFTEWG 249 (300)
T ss_dssp EEEEECT-TCC-EEEE--ECS-STTCCEEEEEECSTTCEEEEETT
T ss_pred EEEEEcC-CCc-EEEE--ECC-CCCCCceEEEECCCCCEEEeccC
Confidence 6777765 331 1111 111 135668899997 8899997643
No 18
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.87 E-value=1.8e-19 Score=167.01 Aligned_cols=246 Identities=15% Similarity=0.162 Sum_probs=155.1
Q ss_pred CcceeeeEEcCCCCEEEEEe------------cCCeEEEEECCCCCCCcceeeeeEEeec-CCcCCCCcceEEEeCC-CC
Q 039428 48 SFLCETAKWDDVGRRFLVSF------------LDGGVGQVLVPDEYSPGTVLEEVKLVKE-DDVVGNATMGIAVDRP-RN 113 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~------------~~~~I~~~d~~~g~~~~~v~~~~~~~~~-~~~~~~~p~Gi~~d~~-~g 113 (335)
...||.++++++|.+|..+. ..|+|+++|+.+... + ..+..+... .....-.|+||.+.++ ++
T Consensus 49 ~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~--~-~~~l~~~g~~~~~~~f~PhGi~~~~d~dg 125 (355)
T 3sre_A 49 DNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEP--A-VSELEIIGNTLDISSFNPHGISTFIDDDN 125 (355)
T ss_dssp CSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSC--C-EEECEEECSSCCGGGCCEEEEEEEECTTC
T ss_pred CCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCC--c-eEEEEccCCCCCcCceeeeeeEEEECCCC
Confidence 45799999999887665541 578999999642221 1 122122111 1111237999999642 23
Q ss_pred --eEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeC-----------------CC
Q 039428 114 --RLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDV-----------------VS 174 (335)
Q Consensus 114 --~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~-----------------~~ 174 (335)
+|||++....+. .-.|+++|++++.........+ ..++.|||+++|++|++||++. ..
T Consensus 126 ~~~L~Vvnh~~~~s-~ielf~~d~~~~~~~~~~~~~g--~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~ 202 (355)
T 3sre_A 126 TVYLLVVNHPGSSS-TVEVFKFQEEEKSLLHLKTIRH--KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAW 202 (355)
T ss_dssp CEEEEEEECSTTCC-EEEEEEEETTTTEEEEEEEECC--TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCC
T ss_pred cEEEEEEECCCCCC-eEEEEEEECCCCEEEEEecccc--CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCc
Confidence 699976432122 2458888888776665545533 3489999999999999999875 25
Q ss_pred CeEEEEccCCcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCc--eeEEEEeccCCcCC
Q 039428 175 SKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEE--EEVKLIELRGGSSL 251 (335)
Q Consensus 175 ~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~--~~~~~~~~~g~~~~ 251 (335)
++||+++++ +...+.. ....||||+++||| +|||+++..++|++++.+..+ ...+.+...
T Consensus 203 g~vyr~d~~-~~~~~~~-----------~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~----- 265 (355)
T 3sre_A 203 SFVTYYSPN-DVRVVAE-----------GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFD----- 265 (355)
T ss_dssp EEEEEECTT-CCEEEEE-----------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECS-----
T ss_pred cEEEEEECC-eEEEeec-----------CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCC-----
Confidence 789999985 3333221 23459999999999 999999999999999987532 133445432
Q ss_pred CCCCeEEEcC-CCcEEEEe-cCC--------C---eEEEEEcC----CCcEEEEEeeeecCCCCCcceEEEEeCCeEEEE
Q 039428 252 SLGDGLALLS-PTKLVVAG-NPY--------P---SARLVESS----DGWETASVVAKFNGPTHRVATAATVKDGRVYLS 314 (335)
Q Consensus 252 ~~pdGia~d~-~g~l~va~-~~~--------~---~~~v~~~~----~~~~~~~~~~~~~~p~~~~Pt~va~~~g~lyV~ 314 (335)
..||||++|+ +|++|++. .+. . .-.|.+.. ..++..++.+. .+.....-|.+...+|+||+.
T Consensus 266 g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI~~~~~~~~~v~~v~~d-dG~~l~~~T~a~~~~g~L~iG 344 (355)
T 3sre_A 266 TLVDNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQDILSEEPKVTVVYAE-NGTVLQGSTVAAVYKGKLLIG 344 (355)
T ss_dssp SEEEEEEECTTTCCEEEEEESCHHHHHSCCTTSCCCEEEEEEECTTSSSCEEEEEEEE-CSSSCCSEEEEEEETTEEEEE
T ss_pred CCCceEEEeCCCCcEEEEecCCceEEEEECCCCCCCCEEEEEEccCCCCcEEEEEEEc-CCCEEEeeEEEEEECCEEEEE
Confidence 3599999999 59999963 210 0 11222211 23444444443 233333333344469999997
Q ss_pred ecc
Q 039428 315 HLL 317 (335)
Q Consensus 315 ~~~ 317 (335)
.-+
T Consensus 345 sv~ 347 (355)
T 3sre_A 345 TVF 347 (355)
T ss_dssp ESS
T ss_pred EcC
Confidence 644
No 19
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.87 E-value=6.7e-20 Score=175.22 Aligned_cols=238 Identities=13% Similarity=0.119 Sum_probs=159.9
Q ss_pred cceeeeEEcCC---CCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCC
Q 039428 49 FLCETAKWDDV---GRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGN 125 (335)
Q Consensus 49 ~~pegia~d~~---g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~ 125 (335)
..|++++||++ |++|+++.. ++|+++|+.++. +. .+. .. ...|.+|++++ +|+|||+ |..++
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~-----v~--~~~--~~--~~~P~giavd~-dG~lyVa--d~~~~ 203 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQY-----VD--IKT--TN--IGQCADVNFTL-NGDMVVV--DDQSS 203 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTE-----EE--EEC--CC--CSCEEEEEECT-TCCEEEE--ECCSC
T ss_pred CCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCE-----EE--Eee--cC--CCCccEEEECC-CCCEEEE--cCCCC
Confidence 46999999984 777666655 899999964454 22 132 22 24799999997 6779995 44321
Q ss_pred c-cceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC-CCcEEEEeCCCCeEEEEccC-CcEEE-EecCCcccccccc
Q 039428 126 K-YSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKVGVE-GQLLS-IIRSPLFTAKEWY 201 (335)
Q Consensus 126 ~-~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~-g~~~~-~~~~~~~~~~~~~ 201 (335)
. ...++.++..++.... ..+ . .+..|+++++|+ +|++||+|..+++|++++++ |.... ++...
T Consensus 204 ~~~~gv~~~~~~~~~~~~-~~~---~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~-------- 270 (433)
T 4hw6_A 204 DTNTGIYLFTRASGFTER-LSL---C-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD-------- 270 (433)
T ss_dssp TTSEEEEEECGGGTTCCE-EEE---E-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS--------
T ss_pred cccceEEEEECCCCeecc-ccc---c-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC--------
Confidence 1 1357777765442210 111 1 268899999999 79999999999999999998 55522 22111
Q ss_pred ccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCce---eEEEEecc-C----------CcCCCCCCeEEE-------
Q 039428 202 KNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEE---EVKLIELR-G----------GSSLSLGDGLAL------- 259 (335)
Q Consensus 202 ~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~---~~~~~~~~-g----------~~~~~~pdGia~------- 259 (335)
....+.+|+++|+| +|||+|..+++|++++.+...+ ....+.-. + ...+..|.||++
T Consensus 271 -~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~ 349 (433)
T 4hw6_A 271 -TKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYA 349 (433)
T ss_dssp -CCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGT
T ss_pred -CCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEcccccc
Confidence 11235689999999 5999999999999999874210 11223211 1 013567999999
Q ss_pred --cCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeec-------------CCCCCcceEEEEe--CCeEEEEecc
Q 039428 260 --LSPTKLVVAGNPYPSARLVESSDGWETASVVAKFN-------------GPTHRVATAATVK--DGRVYLSHLL 317 (335)
Q Consensus 260 --d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~-------------~p~~~~Pt~va~~--~g~lyV~~~~ 317 (335)
|++|+|||++...++++++.. ++ ...++.+.-. ...+..|.+++++ +|+|||++..
T Consensus 350 ~dd~~g~lyvaD~~n~~I~~~~~-~G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~ 422 (433)
T 4hw6_A 350 GEEDEYDFYFCDRDSHTVRVLTP-EG-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCD 422 (433)
T ss_dssp TSSCCEEEEEEETTTTEEEEECT-TS-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred ccCCCCcEEEEECCCCEEEEECC-CC-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCC
Confidence 899999999887678887764 44 2323333210 1136789999998 8999998754
No 20
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.86 E-value=2.4e-20 Score=165.24 Aligned_cols=226 Identities=17% Similarity=0.177 Sum_probs=158.8
Q ss_pred hhhhhhhhhhhhhhh-cCCCceeEEE-c-----------CCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcce
Q 039428 20 IPIAYIISIELAIAM-AKPATHVYQY-H-----------SPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTV 86 (335)
Q Consensus 20 ~p~~~~~~~~~~~~~-~d~~~~~~~~-~-----------~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v 86 (335)
.|.+++++..+.+++ ++.....+.. . .....|.+++++++|++|+.+. +++|+++|+ ++..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~-~~~~---- 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAA-GSNN---- 98 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECT-TCSC----
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeC-CCce----
Confidence 566666666666666 6554433332 1 1124689999999999776666 889999985 4541
Q ss_pred eeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc
Q 039428 87 LEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN 166 (335)
Q Consensus 87 ~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~ 166 (335)
.. ...... ...|.+|++++ +|++|++. ... +.|.++|..+...... .. .....|+++++|++|+
T Consensus 99 ~~---~~~~~~--~~~p~~i~~~~-~g~l~v~~--~~~---~~i~~~~~~~~~~~~~-~~----~~~~~p~~i~~~~~g~ 162 (270)
T 1rwi_B 99 QT---VLPFDG--LNYPEGLAVDT-QGAVYVAD--RGN---NRVVKLAAGSKTQTVL-PF----TGLNDPDGVAVDNSGN 162 (270)
T ss_dssp CE---ECCCCS--CSSEEEEEECT-TCCEEEEE--GGG---TEEEEECTTCCSCEEC-CC----CSCCSCCCEEECTTCC
T ss_pred Ee---eeecCC--cCCCcceEECC-CCCEEEEE--CCC---CEEEEEECCCceeEee-cc----ccCCCceeEEEeCCCC
Confidence 11 111122 14789999997 78999953 322 3699998665433321 11 1256899999999999
Q ss_pred EEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEecc
Q 039428 167 AYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELR 246 (335)
Q Consensus 167 lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~ 246 (335)
+||++..+++|+++++++........ . ....|.+|+++++|+||+++..+++|+++++++. ....+...
T Consensus 163 l~v~~~~~~~i~~~~~~~~~~~~~~~---~------~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~--~~~~~~~~ 231 (270)
T 1rwi_B 163 VYVTDTDNNRVVKLEAESNNQVVLPF---T------DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST--TSTVLPFT 231 (270)
T ss_dssp EEEEEGGGTEEEEECTTTCCEEECCC---S------SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS--CCEECCCC
T ss_pred EEEEECCCCEEEEEecCCCceEeecc---c------CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC--cceeeccC
Confidence 99999999999999999865442211 0 1245899999999999999999999999999876 33332222
Q ss_pred CCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcC
Q 039428 247 GGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESS 281 (335)
Q Consensus 247 g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~ 281 (335)
+ +..|.+++++++|++|+++.+.+.+++++..
T Consensus 232 ~---~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 232 G---LNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp S---CSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred C---CCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 2 4569999999999999998766788877654
No 21
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.86 E-value=4e-19 Score=159.07 Aligned_cols=227 Identities=11% Similarity=0.104 Sum_probs=163.3
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
..|.+++++++|++|+.+..+++|+++|+ +++ .. .+ ..+. .+..|.+|++++ +|++|++ +..+ +
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~-~g~-----~~--~~-~~~~-~~~~~~~i~~~~-~g~l~v~--~~~~---~ 125 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSK-KGG-----FT--EY-PLPQ-PDSGPYGITEGL-NGDIWFT--QLNG---D 125 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECT-TSC-----EE--EE-ECSS-TTCCEEEEEECS-TTCEEEE--ETTT---T
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECC-CCC-----eE--Ee-cCCC-CCCCCccceECC-CCCEEEE--ccCC---C
Confidence 57899999999998887766789999985 455 22 12 2222 124789999996 8999995 3322 3
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccC
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~ 208 (335)
.|.++|++ ++... ..... ....|+++++|++|++|+++..++.|++++++++...... + .....|.
T Consensus 126 ~i~~~~~~-g~~~~-~~~~~---~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~------~---~~~~~~~ 191 (300)
T 2qc5_A 126 RIGKLTAD-GTIYE-YDLPN---KGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPL------P---TNAAAPV 191 (300)
T ss_dssp EEEEECTT-SCEEE-EECSS---TTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEEC------S---STTCCEE
T ss_pred eEEEECCC-CCEEE-ccCCC---CCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEeeC------C---CCCCCcc
Confidence 69999998 55442 12211 2568999999999999999999999999999877654211 0 1234589
Q ss_pred eEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEEE
Q 039428 209 GIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETAS 288 (335)
Q Consensus 209 Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~ 288 (335)
+|+++++|+||+++..+++|+++++++. ...+.... . ...|.++++|++|++|+++...+++.+++. ++ ...
T Consensus 192 ~i~~d~~g~l~v~~~~~~~i~~~~~~g~---~~~~~~~~-~-~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g-~~~- 263 (300)
T 2qc5_A 192 GITSGNDGALWFVEIMGNKIGRITTTGE---ISEYDIPT-P-NARPHAITAGKNSEIWFTEWGANQIGRITN-DN-TIQ- 263 (300)
T ss_dssp EEEECTTSSEEEEETTTTEEEEECTTCC---EEEEECSS-T-TCCEEEEEECSTTCEEEEETTTTEEEEECT-TS-CEE-
T ss_pred eEEECCCCCEEEEccCCCEEEEEcCCCc---EEEEECCC-C-CCCceEEEECCCCCEEEeccCCCeEEEECC-CC-cEE-
Confidence 9999999999999999999999999543 33343332 1 456999999999999999865577877765 33 111
Q ss_pred EeeeecCC-CCCcceEEEEe-CCeEEEEec
Q 039428 289 VVAKFNGP-THRVATAATVK-DGRVYLSHL 316 (335)
Q Consensus 289 ~~~~~~~p-~~~~Pt~va~~-~g~lyV~~~ 316 (335)
.+..+ ....|.+++++ +|+|||+..
T Consensus 264 ---~~~~~~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 264 ---EYQLQTENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp ---EEECCSTTCCCCCEEECTTSCEEEECS
T ss_pred ---EEECCccCCccceeEeCCCCCEEEEcc
Confidence 12112 24558899997 899999764
No 22
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.86 E-value=2.1e-19 Score=165.12 Aligned_cols=232 Identities=14% Similarity=0.202 Sum_probs=158.1
Q ss_pred cCCCcceeeeEEcCCC-CEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCC
Q 039428 45 HSPSFLCETAKWDDVG-RRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVL 123 (335)
Q Consensus 45 ~~~~~~pegia~d~~g-~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~ 123 (335)
.....++|+++|++++ .+||++...++|+++|+.+++ .. ....+ ..+.++++++ +|++|++..
T Consensus 45 ~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~-----~~---~~~~~----~~v~~i~~~~-dg~l~v~~~--- 108 (326)
T 2ghs_A 45 ETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGR-----KT---VHALP----FMGSALAKIS-DSKQLIASD--- 108 (326)
T ss_dssp CSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTE-----EE---EEECS----SCEEEEEEEE-TTEEEEEET---
T ss_pred ccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCc-----EE---EEECC----CcceEEEEeC-CCeEEEEEC---
Confidence 3344589999999974 466666778999999964333 12 22223 2578999996 799999641
Q ss_pred CCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCC------CCeEEEEccCCcEEEEecCCcccc
Q 039428 124 GNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV------SSKIWKVGVEGQLLSIIRSPLFTA 197 (335)
Q Consensus 124 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~------~~~I~~~d~~g~~~~~~~~~~~~~ 197 (335)
..|+++|+++++......... ......++++++|++|++|+++.. .+.|++++ +++...+..
T Consensus 109 ----~gl~~~d~~~g~~~~~~~~~~-~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~~~~------ 176 (326)
T 2ghs_A 109 ----DGLFLRDTATGVLTLHAELES-DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTKLFA------ 176 (326)
T ss_dssp ----TEEEEEETTTCCEEEEECSST-TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEEEEE------
T ss_pred ----CCEEEEECCCCcEEEEeeCCC-CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEEeeC------
Confidence 359999998887654333311 112467899999999999998753 47899999 765543211
Q ss_pred ccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCC--CC-c-eeEEEE-eccCCcCCCCCCeEEEcCCCcEEEEecC
Q 039428 198 KEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIR--KE-E-EEVKLI-ELRGGSSLSLGDGLALLSPTKLVVAGNP 271 (335)
Q Consensus 198 ~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~--~~-~-~~~~~~-~~~g~~~~~~pdGia~d~~g~l~va~~~ 271 (335)
....++++++++|| .||+++...++|++++.+ ++ . ...+.+ ...+ . ...|+|+++|++|++|++..+
T Consensus 177 -----~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~-~-~~~p~gi~~d~~G~lwva~~~ 249 (326)
T 2ghs_A 177 -----DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTG-I-KGGMDGSVCDAEGHIWNARWG 249 (326)
T ss_dssp -----EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTT-S-SSEEEEEEECTTSCEEEEEET
T ss_pred -----CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCC-C-CCCCCeeEECCCCCEEEEEeC
Confidence 12348999999999 799999999999999985 22 1 011223 2221 1 245899999999999999764
Q ss_pred CCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe---CCeEEEEecc
Q 039428 272 YPSARLVESSDGWETASVVAKFNGPTHRVATAATVK---DGRVYLSHLL 317 (335)
Q Consensus 272 ~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~---~g~lyV~~~~ 317 (335)
.+++.+++. ++ +....+..|. ..|+++++. +++|||+...
T Consensus 250 ~~~v~~~d~-~g----~~~~~i~~~~-~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 250 EGAVDRYDT-DG----NHIARYEVPG-KQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp TTEEEEECT-TC----CEEEEEECSC-SBEEEEEEESTTSCEEEEEEBC
T ss_pred CCEEEEECC-CC----CEEEEEECCC-CCcEEEEEecCCCCEEEEEecC
Confidence 467777765 33 2233344443 458899995 3689996543
No 23
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.86 E-value=4.7e-20 Score=169.32 Aligned_cols=225 Identities=16% Similarity=0.130 Sum_probs=154.2
Q ss_pred hhhhhhhhhhcCCCce--eEEE-cCCCcceeeeEEcCC-CCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCC
Q 039428 25 IISIELAIAMAKPATH--VYQY-HSPSFLCETAKWDDV-GRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVG 100 (335)
Q Consensus 25 ~~~~~~~~~~~d~~~~--~~~~-~~~~~~pegia~d~~-g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~ 100 (335)
+++.+..|...+.... ...+ ......|.+++|+++ +.+||++...++|++++.. +.. ..+ .++. .++
T Consensus 8 l~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~-g~~----~~~-~~~~-~~l-- 78 (318)
T 3sov_A 8 LYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFN-KTE----SVQ-NVVV-SGL-- 78 (318)
T ss_dssp EEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETT-SSS----CCC-EEEE-ECC--
T ss_pred EEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEcc-CCC----ceE-EEEc-CCC--
Confidence 3444555555544432 1111 111235789999985 5566666888999999864 431 111 1221 222
Q ss_pred CCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCC-CcEEEEeCC-CCeEE
Q 039428 101 NATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE-GNAYVTDVV-SSKIW 178 (335)
Q Consensus 101 ~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~-G~lyV~d~~-~~~I~ 178 (335)
..|.||++|+.+++||+ +|... ++|.++++++........ .....|+++++|+. |.+|++|+. .++|+
T Consensus 79 ~~p~glavd~~~g~ly~--~d~~~---~~I~~~~~dG~~~~~l~~-----~~~~~P~giavdp~~g~ly~td~~~~~~I~ 148 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYW--TDSET---NRIEVSNLDGSLRKVLFW-----QELDQPRAIALDPSSGFMYWTDWGEVPKIE 148 (318)
T ss_dssp SCCCEEEEETTTTEEEE--EETTT---TEEEEEETTSCSCEEEEC-----SSCSSEEEEEEEGGGTEEEEEECSSSCEEE
T ss_pred CCccEEEEEcCCCeEEE--EECCC---CEEEEEECCCCcEEEEEe-----CCCCCccEEEEeCCCCEEEEEecCCCCEEE
Confidence 37899999976899999 45543 369999998764432221 12678999999985 789999975 79999
Q ss_pred EEccCCcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeE
Q 039428 179 KVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGL 257 (335)
Q Consensus 179 ~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGi 257 (335)
+++++|+..+.+... ....||||++|+++ +||++|+.+++|+++++++. ..+.+. .+ . +..|+|+
T Consensus 149 r~~~dG~~~~~~~~~---------~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~--~~~~~~-~~-~-~~~P~gl 214 (318)
T 3sov_A 149 RAGMDGSSRFIIINS---------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT--NRQAVV-KG-S-LPHPFAL 214 (318)
T ss_dssp EEETTSCSCEEEECS---------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEE-CS-C-CSCEEEE
T ss_pred EEEcCCCCeEEEEEC---------CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC--ceEEEe-cC-C-CCCceEE
Confidence 999998755433221 23459999999855 99999999999999999976 344443 22 2 5679999
Q ss_pred EEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 258 ALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 258 a~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
+++. +.+|++++..+++.+++..++
T Consensus 215 av~~-~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 215 TLFE-DILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp EEET-TEEEEEETTTTEEEEEETTTC
T ss_pred EEeC-CEEEEEecCCCeEEEEECCCC
Confidence 9984 688999887677877776544
No 24
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.86 E-value=1.5e-18 Score=155.15 Aligned_cols=234 Identities=10% Similarity=0.044 Sum_probs=165.9
Q ss_pred EEEcCCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEec
Q 039428 42 YQYHSPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTD 121 (335)
Q Consensus 42 ~~~~~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D 121 (335)
+.++.....|.+++++++|++|+.+..++.|+++|+. +. +.. + ..+. ....|.+|++|+ +|++|++.
T Consensus 8 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~-----~~~--~-~~~~-~~~~~~~i~~~~-~g~l~v~~-- 74 (299)
T 2z2n_A 8 LNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GK-----ITE--Y-PLPT-PDAKVMCLTISS-DGEVWFTE-- 74 (299)
T ss_dssp EECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CC-----EEE--E-ECSS-TTCCEEEEEECT-TSCEEEEE--
T ss_pred EcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CC-----eEE--e-cCCc-ccCceeeEEECC-CCCEEEeC--
Confidence 4445555679999999999988877667899999854 54 221 2 1221 124789999996 89999953
Q ss_pred CCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCcccccccc
Q 039428 122 VLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWY 201 (335)
Q Consensus 122 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~ 201 (335)
... +.|.++|+++ +... ...+ . ....|+++++|++|++|+++...+.|+++|++++.......
T Consensus 75 ~~~---~~i~~~~~~g-~~~~-~~~~--~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~--------- 137 (299)
T 2z2n_A 75 NAA---NKIGRITKKG-IIKE-YTLP--N-PDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELP--------- 137 (299)
T ss_dssp TTT---TEEEEECTTS-CEEE-EECS--S-TTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECS---------
T ss_pred CCC---CeEEEECCCC-cEEE-EeCC--C-cCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCC---------
Confidence 222 3599999874 3331 2221 1 25689999999999999999889999999997766542110
Q ss_pred ccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcC
Q 039428 202 KNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESS 281 (335)
Q Consensus 202 ~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~ 281 (335)
.....|++|+++++|+||+++..++.|+++++ .+ ....+.... . ...|.++++|++|++|+++...+.+.+++.
T Consensus 138 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g--~~~~~~~~~-~-~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~- 211 (299)
T 2z2n_A 138 NKGSYPSFITLGSDNALWFTENQNNAIGRITE-SG--DITEFKIPT-P-ASGPVGITKGNDDALWFVEIIGNKIGRITT- 211 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC--CEEEEECSS-T-TCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred CCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CC--cEEEeeCCC-C-CCcceeEEECCCCCEEEEccCCceEEEECC-
Confidence 02345899999999999999999999999999 43 344443332 1 456999999999999999865577887776
Q ss_pred CCcEEEEEeeeecCC-CCCcceEEEEe-CCeEEEEec
Q 039428 282 DGWETASVVAKFNGP-THRVATAATVK-DGRVYLSHL 316 (335)
Q Consensus 282 ~~~~~~~~~~~~~~p-~~~~Pt~va~~-~g~lyV~~~ 316 (335)
++. ... +..+ ....|.+++++ +|+|||+..
T Consensus 212 ~g~-~~~----~~~~~~~~~~~~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 212 SGE-ITE----FKIPTPNARPHAITAGAGIDLWFTEW 243 (299)
T ss_dssp TCC-EEE----EECSSTTCCEEEEEECSTTCEEEEET
T ss_pred CCc-EEE----EECCCCCCCceeEEECCCCCEEEecc
Confidence 431 111 1112 34568899996 789999763
No 25
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.85 E-value=4.4e-19 Score=160.40 Aligned_cols=251 Identities=19% Similarity=0.232 Sum_probs=166.5
Q ss_pred hhhcCCCceeEEEcCCCcceeeeEEcCCCCEEEE-------EecCCeEEEEECCCCCCCcceeeeeEEeecCCc--CCCC
Q 039428 32 IAMAKPATHVYQYHSPSFLCETAKWDDVGRRFLV-------SFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDV--VGNA 102 (335)
Q Consensus 32 ~~~~d~~~~~~~~~~~~~~pegia~d~~g~~~~~-------~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~--~~~~ 102 (335)
|.+.++.... +......|++++|+++|++|++ +..++.|+++|+.+++ +. .+. .+.. ....
T Consensus 3 i~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~-----~~--~~~-~~~~~~~~~~ 72 (314)
T 1pjx_A 3 IPVIEPLFTK--VTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGK-----KT--VIC-KPEVNGYGGI 72 (314)
T ss_dssp SCEECCCCEE--EECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCC-----EE--EEE-CCEETTEECC
T ss_pred cccccHhHhh--hhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCc-----EE--EEE-ecccCCCCCC
Confidence 3344554443 3455568999999999999888 5567899999854554 22 121 2110 1146
Q ss_pred cceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEE-eecCCCccCCCCCCceeECCCCcEEEEeCCC-------
Q 039428 103 TMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFL-TQLSGKSEEKSTADDIAVDAEGNAYVTDVVS------- 174 (335)
Q Consensus 103 p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~-~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~------- 174 (335)
+.++++++++|+||++. .. ..|.+||++ ++.... .... .......|+++++|++|++|+++...
T Consensus 73 ~~~i~~~~~~g~l~v~~--~~----~~l~~~d~~-g~~~~~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 144 (314)
T 1pjx_A 73 PAGCQCDRDANQLFVAD--MR----LGLLVVQTD-GTFEEIAKKDS-EGRRMQGCNDCAFDYEGNLWITAPAGEVAPADY 144 (314)
T ss_dssp EEEEEECSSSSEEEEEE--TT----TEEEEEETT-SCEEECCSBCT-TSCBCBCCCEEEECTTSCEEEEECBCBCTTSCC
T ss_pred CceEEEecCCCcEEEEE--CC----CCEEEEeCC-CCEEEEEeccC-CCccccCCcCEEECCCCCEEEEecCcccccccc
Confidence 89999997339999954 22 359999998 665432 2211 11224679999999999999998765
Q ss_pred --------CeEEEEccCCcEEEEecCCccccccccccccccCeEEEc----cCC-eEEEEECCCCEEEEEeCCC-Cc-ee
Q 039428 175 --------SKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYH----PDG-FLIVIHMCSGNLFKIDIRK-EE-EE 239 (335)
Q Consensus 175 --------~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~----~dg-~Lyvad~~~~~v~~~d~~~-~~-~~ 239 (335)
+.|++++++++...... ....|++++++ +|| .||+++..+++|++++++. ++ ..
T Consensus 145 ~~~~~~~~~~l~~~~~~g~~~~~~~-----------~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~ 213 (314)
T 1pjx_A 145 TRSMQEKFGSIYCFTTDGQMIQVDT-----------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN 213 (314)
T ss_dssp CBTTSSSCEEEEEECTTSCEEEEEE-----------EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE
T ss_pred cccccCCCCeEEEECCCCCEEEecc-----------CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc
Confidence 78999999876544221 12348999999 999 8999999999999999762 31 01
Q ss_pred EEEE-eccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe-CCe-EEEEec
Q 039428 240 VKLI-ELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATVK-DGR-VYLSHL 316 (335)
Q Consensus 240 ~~~~-~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~-~g~-lyV~~~ 316 (335)
.+.+ ...+ ..+..|+++++|++|++|+++...+.+.+++...+ +....+..+ ...|++++++ +++ |||+..
T Consensus 214 ~~~~~~~~~-~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g----~~~~~~~~~-~~~~~~i~~~~dg~~l~v~~~ 287 (314)
T 1pjx_A 214 KKVWGHIPG-THEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG----QPKMRIRCP-FEKPSNLHFKPQTKTIFVTEH 287 (314)
T ss_dssp EEEEEECCC-CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB----SCSEEEECS-SSCEEEEEECTTSSEEEEEET
T ss_pred ceEEEECCC-CCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCC----cEeEEEeCC-CCCceeEEECCCCCEEEEEeC
Confidence 1222 2222 11145899999999999999764467777765423 112223233 2568899995 555 999654
Q ss_pred c
Q 039428 317 L 317 (335)
Q Consensus 317 ~ 317 (335)
.
T Consensus 288 ~ 288 (314)
T 1pjx_A 288 E 288 (314)
T ss_dssp T
T ss_pred C
Confidence 3
No 26
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.85 E-value=3.3e-19 Score=168.72 Aligned_cols=248 Identities=17% Similarity=0.104 Sum_probs=163.0
Q ss_pred hhhhhhhhhhcCCCceeE-EEcCCCcceeeeEEcCCCC-EEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCC
Q 039428 25 IISIELAIAMAKPATHVY-QYHSPSFLCETAKWDDVGR-RFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNA 102 (335)
Q Consensus 25 ~~~~~~~~~~~d~~~~~~-~~~~~~~~pegia~d~~g~-~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~ 102 (335)
+++....|...+...... .+......|.+++||+.++ +||++..+++|++++. ++........ .++ ...+ ..
T Consensus 87 l~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~-~g~~~~~~~~--~~~-~~~~--~~ 160 (400)
T 3p5b_L 87 FFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQL-DRAHGVSSYD--TVI-SRDI--QA 160 (400)
T ss_dssp EEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-------CCCE--EEE-CSSC--SC
T ss_pred EEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEc-ccCCCCCcce--EEE-eCCC--CC
Confidence 334455555555544322 2223345799999998654 5555577899999985 4420000011 132 2222 47
Q ss_pred cceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC-CCcEEEEeCC-CCeEEEE
Q 039428 103 TMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVV-SSKIWKV 180 (335)
Q Consensus 103 p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~-~~~I~~~ 180 (335)
|.||++|..+++||+ +|... ++|.++|+++......... .+..|++|++|| +|++|++|+. .++|+++
T Consensus 161 p~glavD~~~~~lY~--~d~~~---~~I~~~~~~g~~~~~l~~~-----~~~~P~~iavdp~~g~ly~td~~~~~~I~~~ 230 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYW--TDSVL---GTVSVADTKGVKRKTLFRE-----NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 230 (400)
T ss_dssp EEEEEEETTTTEEEE--EETTT---TEEEEECTTTCSEEEEEEC-----SSCCEEEEEEETTTTEEEEEECSSSCCEEEE
T ss_pred cccEEEEecCCceEE--EECCC---CeEEEEeCCCCceEEEEeC-----CCCCcceEEEecccCeEEEEeCCCCCEEEEE
Confidence 899999976899999 46544 3699999987755433321 267899999998 5789999986 5899999
Q ss_pred ccCCcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEE
Q 039428 181 GVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLAL 259 (335)
Q Consensus 181 d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~ 259 (335)
+++|...+.+... ....|+||++|+++ +||++|...++|+++|+++. ..+.+.... ..+..|.||++
T Consensus 231 ~~dG~~~~~~~~~---------~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~--~~~~~~~~~-~~l~~P~gl~v 298 (400)
T 3p5b_L 231 GLNGVDIYSLVTE---------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILEDE-KRLAHPFSLAV 298 (400)
T ss_dssp ETTSCSCEEEECS---------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--CCEEEEECS-STTSSEEEEEE
T ss_pred eCCCCccEEEEEC---------CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC--ccEEEEeCC-CCCCCCEEEEE
Confidence 9998765443221 23459999999865 99999999999999999986 334432222 22677999999
Q ss_pred cCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEE
Q 039428 260 LSPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATV 306 (335)
Q Consensus 260 d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~ 306 (335)
+ .+.+|++++..++|.+++..++.....+.. ....|.++++
T Consensus 299 ~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~-----~~~~p~~i~v 339 (400)
T 3p5b_L 299 F-EDKVFWTDIINEAIFSANRLTGSDVNLLAE-----NLLSPEDMVL 339 (400)
T ss_dssp E-TTEEEEEESSSCSEEEEESSSCCCCEEEEC-----SCSCEEEEEE
T ss_pred e-CCEEEEecCCCCeEEEEEcCCCCceEEEec-----CCCCCceEEE
Confidence 6 468999988667787777544422222221 1234677766
No 27
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.85 E-value=1.6e-19 Score=165.93 Aligned_cols=216 Identities=11% Similarity=0.075 Sum_probs=147.9
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCC------cCCCCcceEEEeCCCCeEEEEEecC
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDD------VVGNATMGIAVDRPRNRLLVAFTDV 122 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~------~~~~~p~Gi~~d~~~g~l~v~~~D~ 122 (335)
..|.+++++++|++|+++..+++|++++. ++... .+. .+...+ .....|.+|++++++++|||+ |.
T Consensus 91 ~~p~gia~d~~g~l~v~d~~~~~v~~~~~-~g~~~--~~~---~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~--d~ 162 (329)
T 3fvz_A 91 YLPHGLSIDTDGNYWVTDVALHQVFKLDP-HSKEG--PLL---ILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVS--DG 162 (329)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEECT-TCSSC--CSE---EESBTTBCCCSTTCCSSEEEEEECTTTCCEEEE--EC
T ss_pred CCceEEEECCCCCEEEEECCCCEEEEEeC-CCCeE--EEE---EecccCCCCCCccccCCCcEEEEeCCCCeEEEE--eC
Confidence 37999999999998877777899999985 55410 011 121111 111469999999768999994 53
Q ss_pred -CCCccceEEEEECCCCeEEEE-eecCC----CccCCCCCCceeECCC-CcEEEEeCCCCeEEEEccC-CcEEEEecCCc
Q 039428 123 -LGNKYSALAAYDLSTWKRLFL-TQLSG----KSEEKSTADDIAVDAE-GNAYVTDVVSSKIWKVGVE-GQLLSIIRSPL 194 (335)
Q Consensus 123 -~~~~~~~v~~~d~~~~~~~~~-~~~~~----~~~~~~~p~~~~vd~~-G~lyV~d~~~~~I~~~d~~-g~~~~~~~~~~ 194 (335)
.. ++|.+||+++..+... ..... ++ .+..|+++++|++ |++||+|..+++|.+++++ |+....+..+.
T Consensus 163 ~~~---~~I~~~~~~g~~~~~~~~~g~~~~~~~~-~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~ 238 (329)
T 3fvz_A 163 YCN---SRIVQFSPSGKFVTQWGEESSGSSPRPG-QFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS 238 (329)
T ss_dssp SSC---CEEEEECTTSCEEEEECEECCSSSCCTT-EESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT
T ss_pred CCC---CeEEEEcCCCCEEEEeccCCCCCCCCCc-ccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc
Confidence 23 4699999765433321 11111 11 2678999999998 8999999999999999998 88776553221
Q ss_pred cccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCe
Q 039428 195 FTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPS 274 (335)
Q Consensus 195 ~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~ 274 (335)
... ........| |++++.+|++|+++..+++|++++...++ ....+.... ..+..|.+++++++|++||++...++
T Consensus 239 ~~~-~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~-~~~~~~~~~-~~~~~p~~ia~~~dG~lyvad~~~~~ 314 (329)
T 3fvz_A 239 FGR-NVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGE-IIDVFKPVR-KHFDMPHDIVASEDGTVYIGDAHTNT 314 (329)
T ss_dssp TTT-CEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCC-EEEEECCSS-SCCSSEEEEEECTTSEEEEEESSSCC
T ss_pred cCC-CcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCe-EEEEEcCCC-CccCCeeEEEECCCCCEEEEECCCCE
Confidence 110 000001123 56666688888888888999999987764 555553211 23677999999999999999887788
Q ss_pred EEEEEc
Q 039428 275 ARLVES 280 (335)
Q Consensus 275 ~~v~~~ 280 (335)
+++++.
T Consensus 315 I~~~~~ 320 (329)
T 3fvz_A 315 VWKFTL 320 (329)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 888775
No 28
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.84 E-value=6.7e-19 Score=165.86 Aligned_cols=210 Identities=14% Similarity=0.134 Sum_probs=151.1
Q ss_pred CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCC
Q 039428 69 DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSG 148 (335)
Q Consensus 69 ~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~ 148 (335)
.+.|.+++. ++.. +. .++ ... ..|.|+++|+.+++||+ .|...+ +|++++++++.......
T Consensus 95 ~~~I~~i~~-~~~~----~~--~~~--~~~--~~~~gl~~d~~~~~ly~--~D~~~~---~I~r~~~~g~~~~~~~~--- 155 (386)
T 3v65_B 95 RIDIRQVLP-HRSE----YT--LLL--NNL--ENAIALDFHHRRELVFW--SDVTLD---RILRANLNGSNVEEVVS--- 155 (386)
T ss_dssp BSCEEEECT-TSCC----CE--EEE--CSC--SCEEEEEEETTTTEEEE--EETTTT---EEEEEETTSCCEEEEEC---
T ss_pred Cccceeecc-CCCc----EE--EEe--cCC--CccEEEEEecCCCeEEE--EeCCCC---cEEEEecCCCCcEEEEe---
Confidence 468999985 4431 12 122 222 37899999977899999 565543 59999998876543222
Q ss_pred CccCCCCCCceeECC-CCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccC-CeEEEEECCC-
Q 039428 149 KSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPD-GFLIVIHMCS- 225 (335)
Q Consensus 149 ~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~d-g~Lyvad~~~- 225 (335)
.+...|+++++|+ .|++|++|...++|++++++|+..+.+... .+..|+||+++|+ |+||++|...
T Consensus 156 --~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~---------~l~~P~giavdp~~g~ly~td~~~~ 224 (386)
T 3v65_B 156 --TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ---------SLEKPRAIALHPMEGTIYWTDWGNT 224 (386)
T ss_dssp --SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECS---------SCSCEEEEEEETTTTEEEEEECSSS
T ss_pred --CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecC---------CCCCCcEEEEEcCCCeEEEeccCCC
Confidence 1257899999997 578999999999999999998764433221 2345999999985 5999999998
Q ss_pred CEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcC-CCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEE
Q 039428 226 GNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLS-PTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAA 304 (335)
Q Consensus 226 ~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~-~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~v 304 (335)
++|+|+++++. ..+.+...+ +..|.||++|+ +++||+++...+.|++++.+..... .+.. .....|.++
T Consensus 225 ~~I~r~~~dG~--~~~~~~~~~---~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~-~~~~----~~~~~P~gi 294 (386)
T 3v65_B 225 PRIEASSMDGS--GRRIIADTH---LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK-AVIS----QGLPHPFAI 294 (386)
T ss_dssp CEEEEEETTSC--SCEEEECSS---CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE-EEEC----SSCSSEEEE
T ss_pred CEEEEEeCCCC--CcEEEEECC---CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE-EEEE----CCCCCceEE
Confidence 99999999986 333332222 56799999995 5789999887778888876432211 1211 125578999
Q ss_pred EEeCCeEEEEeccC
Q 039428 305 TVKDGRVYLSHLLG 318 (335)
Q Consensus 305 a~~~g~lyV~~~~~ 318 (335)
++.+++||++++..
T Consensus 295 av~~~~ly~td~~~ 308 (386)
T 3v65_B 295 TVFEDSLYWTDWHT 308 (386)
T ss_dssp EEETTEEEEEETTT
T ss_pred EEECCEEEEeeCCC
Confidence 99999999987643
No 29
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.84 E-value=7e-19 Score=163.52 Aligned_cols=222 Identities=14% Similarity=0.126 Sum_probs=155.6
Q ss_pred EEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEE
Q 039428 55 KWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYD 134 (335)
Q Consensus 55 a~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d 134 (335)
+.+++.-+ +++ ..+.|.+++. ++.. .. .++ +.. ..|.|+++|+.+++||+ .|...+ .|++++
T Consensus 40 ~~~~~~~l-l~~-~~~~I~~i~~-~g~~----~~--~~~--~~~--~~~~~l~~d~~~~~ly~--~D~~~~---~I~r~~ 101 (349)
T 3v64_C 40 ALGPEPVL-LFA-NRIDIRQVLP-HRSE----YT--LLL--NNL--ENAIALDFHHRRELVFW--SDVTLD---RILRAN 101 (349)
T ss_dssp ESSSCCEE-EEE-CBSCEEEECT-TSCC----EE--EEE--CSC--SCEEEEEEETTTTEEEE--EETTTT---EEEEEE
T ss_pred ccccCcee-Eee-cccceEEEeC-CCCe----eE--Eee--cCC--CceEEEEEeccccEEEE--EeccCC---ceEEEe
Confidence 44444333 333 2457999985 4541 22 122 222 36899999987899999 565543 599999
Q ss_pred CCCCeEEEEeecCCCccCCCCCCceeECC-CCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCeEEEc
Q 039428 135 LSTWKRLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYH 213 (335)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~ 213 (335)
++++....... .+...|+++++|+ .|++|++|...++|++++++|+..+.+... .+..|+||+++
T Consensus 102 ~~g~~~~~~~~-----~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~---------~l~~P~~iavd 167 (349)
T 3v64_C 102 LNGSNVEEVVS-----TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ---------SLEKPRAIALH 167 (349)
T ss_dssp TTSCSCEEEEC-----SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECT---------TCSCEEEEEEE
T ss_pred cCCCCceEEEe-----CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeC---------CCCCcceEEEe
Confidence 98775443221 1257899999997 578999999999999999998764433211 23459999999
Q ss_pred c-CCeEEEEECCC-CEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcC-CCcEEEEecCCCeEEEEEcCCCcEEEEEe
Q 039428 214 P-DGFLIVIHMCS-GNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLS-PTKLVVAGNPYPSARLVESSDGWETASVV 290 (335)
Q Consensus 214 ~-dg~Lyvad~~~-~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~-~g~l~va~~~~~~~~v~~~~~~~~~~~~~ 290 (335)
| +|+||++|..+ ++|+|+++++. ..+.+... .+..|.|+++|+ +++||+++...+.|.+++.+..... .+.
T Consensus 168 p~~g~ly~td~~~~~~I~r~~~dG~--~~~~~~~~---~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~-~~~ 241 (349)
T 3v64_C 168 PMEGTIYWTDWGNTPRIEASSMDGS--GRRIIADT---HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK-AVI 241 (349)
T ss_dssp TTTTEEEEEECSSSCEEEEEETTSC--SCEESCCS---SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEE
T ss_pred cCcCeEEEeccCCCCEEEEEeCCCC--CcEEEEEC---CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE-EEE
Confidence 8 45999999998 99999999986 33333211 256799999996 5789999887778888876532211 111
Q ss_pred eeecCCCCCcceEEEEeCCeEEEEeccC
Q 039428 291 AKFNGPTHRVATAATVKDGRVYLSHLLG 318 (335)
Q Consensus 291 ~~~~~p~~~~Pt~va~~~g~lyV~~~~~ 318 (335)
. .....|.++++.+++||++++..
T Consensus 242 ~----~~~~~P~giav~~~~ly~td~~~ 265 (349)
T 3v64_C 242 S----QGLPHPFAITVFEDSLYWTDWHT 265 (349)
T ss_dssp C----SSCSSEEEEEEETTEEEEEETTT
T ss_pred e----CCCCCceEEEEECCEEEEecCCC
Confidence 1 12567899999999999987653
No 30
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.84 E-value=7.9e-18 Score=150.48 Aligned_cols=228 Identities=10% Similarity=0.076 Sum_probs=162.4
Q ss_pred CcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 48 SFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
...|.+++++++|++|+.+..++.|+++++ ++. +. ....+. ....|.+|++++ +|++|++. ..+
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~-----~~---~~~~~~-~~~~~~~i~~~~-~g~l~v~~--~~~--- 119 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITK-KGI-----IK---EYTLPN-PDSAPYGITEGP-NGDIWFTE--MNG--- 119 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECT-TSC-----EE---EEECSS-TTCCEEEEEECT-TSCEEEEE--TTT---
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECC-CCc-----EE---EEeCCC-cCCCceeeEECC-CCCEEEEe--cCC---
Confidence 456899999999998888766789999985 454 22 222231 234789999996 78999953 322
Q ss_pred ceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCcccccccccccccc
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGL 207 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p 207 (335)
..|.++|+ +++.... ... . ....|+++++|++|++|+++...+.|++++++++...... . .....|
T Consensus 120 ~~i~~~d~-~g~~~~~-~~~--~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~----~-----~~~~~~ 185 (299)
T 2z2n_A 120 NRIGRITD-DGKIREY-ELP--N-KGSYPSFITLGSDNALWFTENQNNAIGRITESGDITEFKI----P-----TPASGP 185 (299)
T ss_dssp TEEEEECT-TCCEEEE-ECS--S-TTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEC----S-----STTCCE
T ss_pred ceEEEECC-CCCEEEe-cCC--C-CCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCCcEEEeeC----C-----CCCCcc
Confidence 36999999 5544422 121 1 1567899999999999999998899999999776654211 0 023458
Q ss_pred CeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEE
Q 039428 208 NGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETA 287 (335)
Q Consensus 208 ~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~ 287 (335)
++|+++++|+||+++...+.|+++++ .+ ....+.... ....|.++++|++|++|+++...+.+.+++. ++ ...
T Consensus 186 ~~i~~~~~g~l~v~~~~~~~i~~~~~-~g--~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g-~~~ 258 (299)
T 2z2n_A 186 VGITKGNDDALWFVEIIGNKIGRITT-SG--EITEFKIPT--PNARPHAITAGAGIDLWFTEWGANKIGRLTS-NN-IIE 258 (299)
T ss_dssp EEEEECTTSSEEEEETTTTEEEEECT-TC--CEEEEECSS--TTCCEEEEEECSTTCEEEEETTTTEEEEEET-TT-EEE
T ss_pred eeEEECCCCCEEEEccCCceEEEECC-CC--cEEEEECCC--CCCCceeEEECCCCCEEEeccCCceEEEECC-CC-ceE
Confidence 99999999999999999999999999 44 344444332 1456999999999999999765577888876 33 211
Q ss_pred EEeeeecCC-CCCcceEEEEeCCeEEEEec
Q 039428 288 SVVAKFNGP-THRVATAATVKDGRVYLSHL 316 (335)
Q Consensus 288 ~~~~~~~~p-~~~~Pt~va~~~g~lyV~~~ 316 (335)
.+..+ ....|.++++.+|+||++..
T Consensus 259 ----~~~~~~~~~~~~~i~~~~g~l~v~~~ 284 (299)
T 2z2n_A 259 ----EYPIQIKSAEPHGICFDGETIWFAME 284 (299)
T ss_dssp ----EEECSSSSCCEEEEEECSSCEEEEET
T ss_pred ----EEeCCCCCCccceEEecCCCEEEEec
Confidence 12112 23457888887899999764
No 31
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.84 E-value=5.9e-19 Score=168.56 Aligned_cols=240 Identities=9% Similarity=0.119 Sum_probs=159.8
Q ss_pred cceeeeEEcC--CCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCc
Q 039428 49 FLCETAKWDD--VGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNK 126 (335)
Q Consensus 49 ~~pegia~d~--~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~ 126 (335)
..|.++++|| ++++|+++.. ++|+++|.. +.. +. .+. + .+..|.+|++|++++.||++ |..++.
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~-~~~----v~--~~~--~--~~~~P~~ia~d~~G~~lyva--d~~~~~ 202 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFE-KEY----VS--TVY--S--GLSKVRTICWTHEADSMIIT--NDQNNN 202 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBT-EEEEEEETT-TTE----EE--EEE--C--CCSCEEEEEECTTSSEEEEE--ECCSCT
T ss_pred CCCCEEEECCCCCCeEEEEeCC-CcEEEEECC-CCE----EE--EEe--c--CCCCcceEEEeCCCCEEEEE--eCCCCc
Confidence 3799999997 4667666654 899999964 431 22 132 2 22479999999844459995 443221
Q ss_pred -cceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC-CCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccc
Q 039428 127 -YSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNV 204 (335)
Q Consensus 127 -~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~ 204 (335)
...++.++.++..... ..+ . .+..|+++++|+ +|++||+|..+++|+++++++.....+ +.. +..
T Consensus 203 ~~~~v~~~~~~g~~~~~-~~l---~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~----~~~----~~~ 269 (430)
T 3tc9_A 203 DRPNNYILTRESGFKVI-TEL---T-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL----FTI----QDS 269 (430)
T ss_dssp TSEEEEEEEGGGTSCSE-EEE---E-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE----EEC----SSS
T ss_pred ccceEEEEeCCCceeee-eee---c-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE----EEc----CCC
Confidence 1357778876542211 111 1 167899999999 799999999999999999997765321 111 012
Q ss_pred cccCeEEEccCC-eEEEEECCCCEEEEEeCCCCcee---EEEEecc-C----------CcCCCCCC-eEEEc--------
Q 039428 205 FGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEE---VKLIELR-G----------GSSLSLGD-GLALL-------- 260 (335)
Q Consensus 205 ~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~---~~~~~~~-g----------~~~~~~pd-Gia~d-------- 260 (335)
..|+||+++|+| +||+++..+++|++++.++..+. ...+... + ...+..|. |++++
T Consensus 270 ~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D 349 (430)
T 3tc9_A 270 GWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSS 349 (430)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSS
T ss_pred CcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccC
Confidence 359999999999 59999999999999998863101 2233211 1 11256788 89984
Q ss_pred CCCcEEEEecCCCeEEEEEcCCCcEEEEEeee----ecC---------CCCCcceEEEEe--CCeEEEEecc
Q 039428 261 SPTKLVVAGNPYPSARLVESSDGWETASVVAK----FNG---------PTHRVATAATVK--DGRVYLSHLL 317 (335)
Q Consensus 261 ~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~----~~~---------p~~~~Pt~va~~--~g~lyV~~~~ 317 (335)
++|+|||++.+.++++++.. ++ ....+.+. ..+ ..+..|.+++++ +++|||++..
T Consensus 350 ~~g~lyvaD~~n~~I~~i~~-~G-~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~ 419 (430)
T 3tc9_A 350 DEYDFYFCDRENHCIRILTP-QG-RVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRE 419 (430)
T ss_dssp CCEEEEEEEGGGTEEEEECT-TS-EEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred CCCeEEEEECCCcEEEEECC-CC-cEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECC
Confidence 56899999876677877763 44 33333332 111 126789999997 5999998754
No 32
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.84 E-value=1.3e-18 Score=159.04 Aligned_cols=241 Identities=16% Similarity=0.192 Sum_probs=161.4
Q ss_pred EcCCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCC
Q 039428 44 YHSPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVL 123 (335)
Q Consensus 44 ~~~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~ 123 (335)
+......|++++|+++|++|+++..++.|+++|..+++ .. .+.... ...+.+|++++ +|++|++.....
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~-----~~--~~~~~~---~~~~~~i~~~~-dg~l~v~~~~~~ 108 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE-----IK--RPFVSH---KANPAAIKIHK-DGRLFVCYLGDF 108 (333)
T ss_dssp EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC-----EE--EEEECS---SSSEEEEEECT-TSCEEEEECTTS
T ss_pred EeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc-----EE--EEeeCC---CCCcceEEECC-CCcEEEEeCCCC
Confidence 44445578999999999988887778899999864443 22 122111 24689999997 789999643210
Q ss_pred CCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCC------CCeEEEEccCCcEEEEecCCcccc
Q 039428 124 GNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV------SSKIWKVGVEGQLLSIIRSPLFTA 197 (335)
Q Consensus 124 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~------~~~I~~~d~~g~~~~~~~~~~~~~ 197 (335)
.. ...|++||+++++....... .. ....|+++++|++|++|+++.. .+.|++++++++....+..
T Consensus 109 ~~-~~~i~~~d~~~~~~~~~~~~--~~-~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----- 179 (333)
T 2dg1_A 109 KS-TGGIFAATENGDNLQDIIED--LS-TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ----- 179 (333)
T ss_dssp SS-CCEEEEECTTSCSCEEEECS--SS-SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-----
T ss_pred CC-CceEEEEeCCCCEEEEEEcc--Cc-cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec-----
Confidence 00 13699999998765522221 11 1467899999999999999875 5789999998643332110
Q ss_pred ccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEE------eccCCcCCCCCCeEEEcCCCcEEEEec
Q 039428 198 KEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLI------ELRGGSSLSLGDGLALLSPTKLVVAGN 270 (335)
Q Consensus 198 ~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~------~~~g~~~~~~pdGia~d~~g~l~va~~ 270 (335)
....++++++++|| .||+++..+++|++++++..+.....+ ...+ ...|+++++|++|++|++..
T Consensus 180 -----~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~---~~~~~~i~~d~~G~l~v~~~ 251 (333)
T 2dg1_A 180 -----NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTG---HEGPDSCCIDSDDNLYVAMY 251 (333)
T ss_dssp -----EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCS---SSEEEEEEEBTTCCEEEEEE
T ss_pred -----CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCC---CCCCCceEECCCCCEEEEEc
Confidence 12348999999999 699999989999999995421022211 1111 13599999999999999976
Q ss_pred CCCeEEEEEcCCCcEEEEEeeeecCCCC-----CcceEEEEe--CCeEEEEecc
Q 039428 271 PYPSARLVESSDGWETASVVAKFNGPTH-----RVATAATVK--DGRVYLSHLL 317 (335)
Q Consensus 271 ~~~~~~v~~~~~~~~~~~~~~~~~~p~~-----~~Pt~va~~--~g~lyV~~~~ 317 (335)
..+.+.+++. ++. ....+..+.. ..|+++++. +++|||+...
T Consensus 252 ~~~~v~~~d~-~g~----~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 252 GQGRVLVFNK-RGY----PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp TTTEEEEECT-TSC----EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCCEEEEECC-CCC----EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 4467887765 331 2223333321 268899995 4689996544
No 33
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.84 E-value=8.8e-19 Score=156.88 Aligned_cols=200 Identities=12% Similarity=0.070 Sum_probs=146.3
Q ss_pred cceeeeEE-cCCCCEEEEEec-CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCc
Q 039428 49 FLCETAKW-DDVGRRFLVSFL-DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNK 126 (335)
Q Consensus 49 ~~pegia~-d~~g~~~~~~~~-~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~ 126 (335)
..|.++++ +++|++|+++.. +++|+++| .+++. +. .+.... ...|.+|++++ +|++||+ +...
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~----~~---~~~~~~--~~~~~~i~~~~-~g~l~v~--~~~~-- 141 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQF----VR---KFGATI--LQHPRGVTVDN-KGRIIVV--ECKV-- 141 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCE----EE---EECTTT--CSCEEEEEECT-TSCEEEE--ETTT--
T ss_pred cCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcE----EE---EecCcc--CCCceEEEEeC-CCCEEEE--ECCC--
Confidence 46899999 577877777643 78999998 55651 22 221221 24789999997 7899995 4332
Q ss_pred cceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccc
Q 039428 127 YSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 127 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (335)
+.|.+||+++.... ..... .....|+++++|++|++||+++.+++|++++++|+....+... .....
T Consensus 142 -~~i~~~~~~g~~~~-~~~~~---~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~--------g~~~~ 208 (286)
T 1q7f_A 142 -MRVIIFDQNGNVLH-KFGCS---KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGE--------GITNY 208 (286)
T ss_dssp -TEEEEECTTSCEEE-EEECT---TTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCT--------TTSCS
T ss_pred -CEEEEEcCCCCEEE-EeCCC---CccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccC--------CccCC
Confidence 36999998754333 22221 1256899999999999999999999999999998876544321 11245
Q ss_pred cCeEEEccCCeEEEEECCCC-EEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcC
Q 039428 207 LNGIVYHPDGFLIVIHMCSG-NLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESS 281 (335)
Q Consensus 207 p~Gia~~~dg~Lyvad~~~~-~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~ 281 (335)
|.+|+++++|+|||++..++ +|.+++.++. ....+.... . ...|.+++++++|++||++. .+.+++++..
T Consensus 209 p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~--~~~~~~~~~-~-~~~~~~i~~~~~g~l~vs~~-~~~v~v~~~~ 279 (286)
T 1q7f_A 209 PIGVGINSNGEILIADNHNNFNLTIFTQDGQ--LISALESKV-K-HAQCFDVALMDDGSVVLASK-DYRLYIYRYV 279 (286)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEECTTSC--EEEEEEESS-C-CSCEEEEEEETTTEEEEEET-TTEEEEEECS
T ss_pred CcEEEECCCCCEEEEeCCCCEEEEEECCCCC--EEEEEcccC-C-CCcceeEEECCCCcEEEECC-CCeEEEEEcc
Confidence 89999999999999999886 9999998766 566665432 1 34588999999999999965 4778887754
No 34
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.83 E-value=4e-19 Score=169.84 Aligned_cols=238 Identities=12% Similarity=0.061 Sum_probs=159.8
Q ss_pred hhhhhhhhh---hhhhhhcCCCceeEEE-----------cCCCcceeeeEEcCCCCEEEEEecC----CeEEEEECCCCC
Q 039428 20 IPIAYIISI---ELAIAMAKPATHVYQY-----------HSPSFLCETAKWDDVGRRFLVSFLD----GGVGQVLVPDEY 81 (335)
Q Consensus 20 ~p~~~~~~~---~~~~~~~d~~~~~~~~-----------~~~~~~pegia~d~~g~~~~~~~~~----~~I~~~d~~~g~ 81 (335)
.|.+++++. .+.++|+|.. +++.. ......|.+++++++|++|+++..+ ..++.++. .+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~-~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTR-ASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECG-GGT
T ss_pred CCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEEC-CCC
Confidence 477888775 3778888874 33322 1223469999999999976666422 24777764 344
Q ss_pred CCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeE-EEEeecCCCccCCCCCCcee
Q 039428 82 SPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKR-LFLTQLSGKSEEKSTADDIA 160 (335)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~~~~p~~~~ 160 (335)
+ ... ..+ +. ...|+|+++|+.+|+||+ +|... ++|+++|++++.. ....... . ...+++++
T Consensus 218 ~----~~~-~~~--~~--~~~P~giavd~~~G~lyv--~d~~~---~~V~~~d~~~g~~~~~~~~~~---~-~~~~~~ia 279 (433)
T 4hw6_A 218 F----TER-LSL--CN--ARGAKTCAVHPQNGKIYY--TRYHH---AMISSYDPATGTLTEEEVMMD---T-KGSNFHIV 279 (433)
T ss_dssp T----CCE-EEE--EE--CSSBCCCEECTTTCCEEE--CBTTC---SEEEEECTTTCCEEEEEEECS---C-CSSCEEEE
T ss_pred e----ecc-ccc--cc--cCCCCEEEEeCCCCeEEE--EECCC---CEEEEEECCCCeEEEEEeccC---C-CCCcccEE
Confidence 2 110 111 11 257999999976899999 56654 3699999987766 2222221 1 23456799
Q ss_pred ECCCCc-EEEEeCCCCeEEEEccCCc---E---EEEecC---Cccc-cccccccccccCeEEE---------ccCCeEEE
Q 039428 161 VDAEGN-AYVTDVVSSKIWKVGVEGQ---L---LSIIRS---PLFT-AKEWYKNVFGLNGIVY---------HPDGFLIV 220 (335)
Q Consensus 161 vd~~G~-lyV~d~~~~~I~~~d~~g~---~---~~~~~~---~~~~-~~~~~~~~~~p~Gia~---------~~dg~Lyv 220 (335)
+|++|+ +||+|+.+++|++++.++. . ..+.+. ..+. .+.....+..|.||++ +++|+|||
T Consensus 280 ~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyv 359 (433)
T 4hw6_A 280 WHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYF 359 (433)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEE
T ss_pred EeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEE
Confidence 999997 9999999999999987632 1 122222 1111 1112234667999999 88889999
Q ss_pred EECCCCEEEEEeCCCCceeEEEEeccC--------------CcCCCCCCeEEEc-CCCcEEEEecCCCeEEEEEc
Q 039428 221 IHMCSGNLFKIDIRKEEEEVKLIELRG--------------GSSLSLGDGLALL-SPTKLVVAGNPYPSARLVES 280 (335)
Q Consensus 221 ad~~~~~v~~~d~~~~~~~~~~~~~~g--------------~~~~~~pdGia~d-~~g~l~va~~~~~~~~v~~~ 280 (335)
+|+.+++|.++++++ .+..+.-.+ ...|..|.||++| ++|+|||++.+.++++.+..
T Consensus 360 aD~~n~~I~~~~~~G---~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 360 CDRDSHTVRVLTPEG---RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EETTTTEEEEECTTS---EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EECCCCEEEEECCCC---CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 999999999999865 344443211 1135679999999 88999999876678887764
No 35
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.83 E-value=2e-18 Score=153.70 Aligned_cols=221 Identities=14% Similarity=0.186 Sum_probs=150.6
Q ss_pred EEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEE
Q 039428 62 RFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRL 141 (335)
Q Consensus 62 ~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~ 141 (335)
.++++. .++|++++. ++....+ .+...++..+. ..|.|+++|+++++||+ +|... +.|.++|++++...
T Consensus 3 ~l~~~~-~~~I~~~~~-~g~~~~~-~~~~~~~~~~~---~~~~gi~~d~~~~~ly~--~d~~~---~~I~~~~~~g~~~~ 71 (267)
T 1npe_A 3 HLLFAQ-TGKIERLPL-ERNTMKK-TEAKAFLHIPA---KVIIGLAFDCVDKVVYW--TDISE---PSIGRASLHGGEPT 71 (267)
T ss_dssp EEEEEE-EEEEEEEEE-SSSCBCG-GGCEEEEEEEE---EEEEEEEEETTTTEEEE--EETTT---TEEEEEESSSCCCE
T ss_pred EEEEEc-CCeEEEEEe-cCccccc-ccceeeecCCC---CcEEEEEEecCCCEEEE--EECCC---CEEEEEecCCCCcE
Confidence 344442 358999985 4441000 00001222221 36889999987889999 45543 36999999876543
Q ss_pred EEeecCCCccCCCCCCceeECCC-CcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccC-CeEE
Q 039428 142 FLTQLSGKSEEKSTADDIAVDAE-GNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPD-GFLI 219 (335)
Q Consensus 142 ~~~~~~~~~~~~~~p~~~~vd~~-G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~d-g~Ly 219 (335)
.... .+...|+++++|++ |++|++|...++|++++.+|+..+.+... ....|++|+++++ |+||
T Consensus 72 ~~~~-----~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~---------~~~~P~~i~vd~~~g~ly 137 (267)
T 1npe_A 72 TIIR-----QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDT---------GLVNPRGIVTDPVRGNLY 137 (267)
T ss_dssp EEEC-----TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS---------SCSSEEEEEEETTTTEEE
T ss_pred EEEE-----CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEEC---------CCCCccEEEEeeCCCEEE
Confidence 2221 12578999999986 78999999999999999998654322111 1245999999995 6999
Q ss_pred EEECC--CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCC-CcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCC
Q 039428 220 VIHMC--SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSP-TKLVVAGNPYPSARLVESSDGWETASVVAKFNGP 296 (335)
Q Consensus 220 vad~~--~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~-g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p 296 (335)
+++.. +++|+++++++. ..+.+...+ +..|.|+++|++ ++||+++...+.+.+++.+.. ..... +.
T Consensus 138 v~~~~~~~~~I~~~~~dg~--~~~~~~~~~---~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~-~~~~~---~~-- 206 (267)
T 1npe_A 138 WTDWNRDNPKIETSHMDGT--NRRILAQDN---LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP-GRRKV---LE-- 206 (267)
T ss_dssp EEECCSSSCEEEEEETTSC--CCEEEECTT---CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE-EEEEE---EE--
T ss_pred EEECCCCCcEEEEEecCCC--CcEEEEECC---CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC-ceEEE---ec--
Confidence 99987 689999999876 333333222 467999999986 589999887788888876422 11111 11
Q ss_pred CCCcceEEEEeCCeEEEEeccC
Q 039428 297 THRVATAATVKDGRVYLSHLLG 318 (335)
Q Consensus 297 ~~~~Pt~va~~~g~lyV~~~~~ 318 (335)
.+..|.++++++++|||+++.+
T Consensus 207 ~~~~P~gi~~d~~~lyva~~~~ 228 (267)
T 1npe_A 207 GLQYPFAVTSYGKNLYYTDWKT 228 (267)
T ss_dssp CCCSEEEEEEETTEEEEEETTT
T ss_pred CCCCceEEEEeCCEEEEEECCC
Confidence 3456889999999999987643
No 36
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.83 E-value=7.3e-19 Score=167.91 Aligned_cols=238 Identities=10% Similarity=0.042 Sum_probs=158.4
Q ss_pred hhhhhhhh--hhhhhhhcCCCceeEEE-----------cCCCcceeeeEEcCCCCEEEEE-ecC----CeEEEEECCCCC
Q 039428 20 IPIAYIIS--IELAIAMAKPATHVYQY-----------HSPSFLCETAKWDDVGRRFLVS-FLD----GGVGQVLVPDEY 81 (335)
Q Consensus 20 ~p~~~~~~--~~~~~~~~d~~~~~~~~-----------~~~~~~pegia~d~~g~~~~~~-~~~----~~I~~~d~~~g~ 81 (335)
.|.+++++ .++.++++|.. +++.. ......|.+++++++|+.+|++ ..+ ..++.++. ++.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 57777777 35667777654 33322 1233469999999999955555 432 25777874 455
Q ss_pred CCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeE
Q 039428 82 SPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAV 161 (335)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~v 161 (335)
+ ... ..+ +. ...|+++++|+++|+||+ +|... ++|++||++++......... . ...|+++++
T Consensus 216 ~----~~~-~~l--~~--~~~p~giavdp~~g~lyv--~d~~~---~~V~~~~~~~~~~~~~~~~~---~-~~~P~gia~ 277 (430)
T 3tc9_A 216 F----KVI-TEL--TK--GQNCNGAETHPINGELYF--NSWNA---GQVFRYDFTTQETTPLFTIQ---D-SGWEFHIQF 277 (430)
T ss_dssp S----CSE-EEE--EE--CSSCCCEEECTTTCCEEE--EETTT---TEEEEEETTTTEEEEEEECS---S-SSCCEEEEE
T ss_pred e----eee-eee--cc--CCCceEEEEeCCCCEEEE--EECCC---CEEEEEECCCCcEEEEEEcC---C-CCcceeEEE
Confidence 2 110 111 11 247899999987899999 56544 36999999988663222221 1 467999999
Q ss_pred CCCCc-EEEEeCCCCeEEEEccCCc--E----EEEecC---Cccc-cccccccccccC-eEEEc--------cCCeEEEE
Q 039428 162 DAEGN-AYVTDVVSSKIWKVGVEGQ--L----LSIIRS---PLFT-AKEWYKNVFGLN-GIVYH--------PDGFLIVI 221 (335)
Q Consensus 162 d~~G~-lyV~d~~~~~I~~~d~~g~--~----~~~~~~---~~~~-~~~~~~~~~~p~-Gia~~--------~dg~Lyva 221 (335)
|++|+ +||+|..+++|++++.++. . ..+.+. ..+. .+.....+..|. |++++ ++|+|||+
T Consensus 278 ~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyva 357 (430)
T 3tc9_A 278 HPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFC 357 (430)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEE
T ss_pred cCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEE
Confidence 99998 9999999999999998863 1 122221 1111 011123456798 89984 56899999
Q ss_pred ECCCCEEEEEeCCCCceeEEEEecc------C--------CcCCCCCCeEEEcC-CCcEEEEecCCCeEEEEEc
Q 039428 222 HMCSGNLFKIDIRKEEEEVKLIELR------G--------GSSLSLGDGLALLS-PTKLVVAGNPYPSARLVES 280 (335)
Q Consensus 222 d~~~~~v~~~d~~~~~~~~~~~~~~------g--------~~~~~~pdGia~d~-~g~l~va~~~~~~~~v~~~ 280 (335)
|..+++|.+|++++ .+..+... | ...|..|.|+++|+ +|.|||++.+.++++.+..
T Consensus 358 D~~n~~I~~i~~~G---~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 358 DRENHCIRILTPQG---RVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EGGGTEEEEECTTS---EEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred ECCCcEEEEECCCC---cEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 99999999999765 33333211 1 01256799999999 5899999876677877764
No 37
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.83 E-value=1.8e-19 Score=181.91 Aligned_cols=248 Identities=18% Similarity=0.108 Sum_probs=163.8
Q ss_pred hhhhhhhhhhcCCCceeEEE-cCCCcceeeeEEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCC
Q 039428 25 IISIELAIAMAKPATHVYQY-HSPSFLCETAKWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNA 102 (335)
Q Consensus 25 ~~~~~~~~~~~d~~~~~~~~-~~~~~~pegia~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~ 102 (335)
+++.+..|.+.+.....+.. ......|.+++|+++++.+|++ ...++|++++.. +...+.... .++ ..++ ..
T Consensus 381 l~~~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~-g~~~~~~~~--~~i-~~~~--~~ 454 (699)
T 1n7d_A 381 FFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLD-RAHGVSSYD--TVI-SRDI--QA 454 (699)
T ss_dssp CCCCTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESC-CCCC-CCCC--CBC-CSCC----
T ss_pred EecCccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecC-CCCCCcceE--EEE-eCCC--CC
Confidence 33445566666655443332 2233469999999876666665 778999999854 410000001 121 1121 36
Q ss_pred cceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCC-CcEEEEeCCC-CeEEEE
Q 039428 103 TMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE-GNAYVTDVVS-SKIWKV 180 (335)
Q Consensus 103 p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~-G~lyV~d~~~-~~I~~~ 180 (335)
|.||++|..+++||+ +|...+ +|.++|+++......+. .++..|+++++|++ |+||++|+.. ++|+++
T Consensus 455 P~glavD~~~g~LY~--tD~~~~---~I~v~d~dg~~~~~l~~-----~~~~~P~giavDp~~g~ly~td~~~~~~I~~~ 524 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYW--TDSVLG---TVSVADTKGVKRKTLFR-----EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 524 (699)
T ss_dssp CCCEECCCSSSBCEE--CCTTTS---CEEEEBSSSCCEEEECC-----CSSCCCCCEECCSSSSCCEECCCSSSCCEEBC
T ss_pred cceEEEEeeCCcEEE--EeccCC---eEEEEecCCCceEEEEe-----CCCCCcceEEEccCCCcEEEcccCCCCeEEEE
Confidence 899999966899999 565543 59999998765543322 12578999999985 7899999875 899999
Q ss_pred ccCCcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEE
Q 039428 181 GVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLAL 259 (335)
Q Consensus 181 d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~ 259 (335)
+++|...+.+... .+..|+||++++++ +||++|..+++|+++++++. ..+.+.... ..+..|+||++
T Consensus 525 ~~dG~~~~~l~~~---------~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~--~~~~~~~~~-~~~~~P~glav 592 (699)
T 1n7d_A 525 GLNGVDIYSLVTE---------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILEDE-KRLAHPFSLAV 592 (699)
T ss_dssp CSSSCCCCEESCS---------SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS--CCEEECCCS-SSCSSCCCCEE
T ss_pred eCCCCCeeEEEeC---------CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC--ceEEEEecC-CcCCCceEeEE
Confidence 9998755433211 23459999999875 99999999999999999875 344443222 22577999999
Q ss_pred cCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEE
Q 039428 260 LSPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATV 306 (335)
Q Consensus 260 d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~ 306 (335)
+.+ .||++++..++|.+++...+ +....+..+ ...|+++++
T Consensus 593 d~~-~lywtd~~~~~V~~~d~~~G----~~~~~i~~~-~~~P~~i~v 633 (699)
T 1n7d_A 593 FED-KVFWTDIINEAIFSANRLTG----SDVNLLAEN-LLSPEDMVL 633 (699)
T ss_dssp ETT-EEEEECSTTTCEEEEETTTE----EEEECCCTT-CSSCCCCCB
T ss_pred ECC-EEEEEeCCCCeEEEEEccCC----CceEEeecC-CCCCcEEEE
Confidence 975 89999886678887775443 233333222 345777766
No 38
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=4e-18 Score=163.91 Aligned_cols=249 Identities=10% Similarity=0.083 Sum_probs=159.7
Q ss_pred ceeeeEEcCC--CCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEE-------eCCCCeEEEEEe
Q 039428 50 LCETAKWDDV--GRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAV-------DRPRNRLLVAFT 120 (335)
Q Consensus 50 ~pegia~d~~--g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~-------d~~~g~l~v~~~ 120 (335)
.|.++++||+ +++|++...+++|+++|..++. +. .++.......++|.+|++ +++.+.||++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~-----v~--~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyva-- 210 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM-----LS--SPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVA-- 210 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTE-----EE--EEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEE--
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCE-----EE--EEEccCccccCCCcEEEEeecccccCCCCCEEEEE--
Confidence 5899999983 5555555656789999964333 23 133322211257999999 9744559994
Q ss_pred cCCCC---ccceEEEEECCC-CeEEE---EeecCCCccCCCCCCceeECC-CCcEEEEeCCCCeEEEEccC-------Cc
Q 039428 121 DVLGN---KYSALAAYDLST-WKRLF---LTQLSGKSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKVGVE-------GQ 185 (335)
Q Consensus 121 D~~~~---~~~~v~~~d~~~-~~~~~---~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~-------g~ 185 (335)
|..++ ....|+.++.+. +.... ...+ . ....|+++++|+ +|+||++|..+++|+++|++ ++
T Consensus 211 d~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v---~-~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg 286 (496)
T 3kya_A 211 IDYDGKGDESPSVYIIKRNADGTFDDRSDIQLI---A-AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNG 286 (496)
T ss_dssp ECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEE---E-EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTT
T ss_pred eCCCCCcccCceEEEEecCCCCceeecccceee---c-cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCc
Confidence 54431 124688887655 22210 0011 1 156899999999 58999999999999999987 33
Q ss_pred EEEE------ec--CCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeE---EEEecc-C-----
Q 039428 186 LLSI------IR--SPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEV---KLIELR-G----- 247 (335)
Q Consensus 186 ~~~~------~~--~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~---~~~~~~-g----- 247 (335)
.... .+ ...+.. +....|.+||++|+| .|||+|+.+++|+|++.++....+ ..+.-. +
T Consensus 287 ~~~tp~~~~~~g~~~~l~~~----~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~ 362 (496)
T 3kya_A 287 GSWDPIVKNNPNTFKQLFTI----ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYR 362 (496)
T ss_dssp CCCCCBGGGCTTTEEEEEEC----SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCB
T ss_pred eeecccccccccccceeEec----CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCccc
Confidence 3200 00 000111 122348899999999 599999999999999887641121 233211 1
Q ss_pred -----CcCCCCCC-eEEEc-------CCCcEEEEecCCCeEEEEEcCCCcEEEEEeee-------------e-cC-----
Q 039428 248 -----GSSLSLGD-GLALL-------SPTKLVVAGNPYPSARLVESSDGWETASVVAK-------------F-NG----- 295 (335)
Q Consensus 248 -----~~~~~~pd-Gia~d-------~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~-------------~-~~----- 295 (335)
...|..|. |++++ ++|+||||+...++|+++. .++ ...++.+. + .+
T Consensus 363 DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~ 440 (496)
T 3kya_A 363 DDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAGRGASTSLADGNQWGTDDGDLREV 440 (496)
T ss_dssp CCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEESCTTHHHHHSCSCCCCCEETTTT
T ss_pred CCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEecccccccccCccccccCCCCchhh
Confidence 12367799 88887 6789999987667888886 344 23344332 0 01
Q ss_pred CCCCcceEEEEe-C-CeEEEEecc
Q 039428 296 PTHRVATAATVK-D-GRVYLSHLL 317 (335)
Q Consensus 296 p~~~~Pt~va~~-~-g~lyV~~~~ 317 (335)
..+..|++++++ + |+|||++..
T Consensus 441 a~f~~P~gIavd~~~g~lyVaD~~ 464 (496)
T 3kya_A 441 ARFRDVSGLVYDDVKEMFYVHDQV 464 (496)
T ss_dssp CCCSSEEEEEEETTTTEEEEEETT
T ss_pred hhcCCCcEEEEECCCCEEEEEeCC
Confidence 137889999997 4 999998754
No 39
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.82 E-value=1.1e-17 Score=153.20 Aligned_cols=211 Identities=14% Similarity=0.176 Sum_probs=147.4
Q ss_pred CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCC----CeEEEEe
Q 039428 69 DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLST----WKRLFLT 144 (335)
Q Consensus 69 ~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~----~~~~~~~ 144 (335)
.+.|.++|....++ . .++ +.. ..|.|+++|+++++||+ +|... +.|+++|+++ .......
T Consensus 9 ~~~I~~i~~~~~~~-----~--~~~--~~~--~~p~g~~~d~~~~~ly~--~D~~~---~~I~~~~~~g~~~~~~~~~~~ 72 (316)
T 1ijq_A 9 RHEVRKMTLDRSEY-----T--SLI--PNL--RNVVALDTEVASNRIYW--SDLSQ---RMICSTQLDRAHGVSSYDTVI 72 (316)
T ss_dssp BSSEEEEETTSCCC-----E--EEE--CSC--SSEEEEEEETTTTEEEE--EETTT---TEEEEEEC--------CEEEE
T ss_pred CCeEEEEECCCcce-----E--ehh--cCC--CceEEEEEEeCCCEEEE--EECCC---CcEEEEECCCCCCCcccEEEE
Confidence 46799998643331 2 132 222 47899999987889999 56544 3699999986 2222111
Q ss_pred ecCCCccCCCCCCceeECC-CCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCeEEEcc-CCeEEEEE
Q 039428 145 QLSGKSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHP-DGFLIVIH 222 (335)
Q Consensus 145 ~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~-dg~Lyvad 222 (335)
. .++..|.++++|+ +|++|++|..+++|.+++++|+..+.+... ....|++|+++| +|+||+++
T Consensus 73 ~-----~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~---------~~~~P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 73 S-----RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE---------NGSKPRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp C-----SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC---------TTCCEEEEEEETTTTEEEEEE
T ss_pred e-----CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEEC---------CCCCcceEEeCCCCCEEEEEc
Confidence 1 1257899999996 578999999999999999998765433211 234599999998 55999999
Q ss_pred CCC-CEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCC-CcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCc
Q 039428 223 MCS-GNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSP-TKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRV 300 (335)
Q Consensus 223 ~~~-~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~-g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~ 300 (335)
... ++|+++++++. ..+.+... .+..|.||++|++ ++||+++...+.+.+++.+.... +.+... ......
T Consensus 139 ~~~~~~I~~~~~dG~--~~~~~~~~---~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~--~~~~~~-~~~~~~ 210 (316)
T 1ijq_A 139 WGTPAKIKKGGLNGV--DIYSLVTE---NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR--KTILED-EKRLAH 210 (316)
T ss_dssp CSSSCEEEEEETTSC--CEEEEECS---SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEEC-TTTTSS
T ss_pred cCCCCeEEEEcCCCC--CeEEEEEC---CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce--EEEeec-CCccCC
Confidence 886 89999999886 44444221 2567999999965 68999988777888888753221 122111 123567
Q ss_pred ceEEEEeCCeEEEEecc
Q 039428 301 ATAATVKDGRVYLSHLL 317 (335)
Q Consensus 301 Pt~va~~~g~lyV~~~~ 317 (335)
|.++++++++||++++.
T Consensus 211 P~giav~~~~ly~~d~~ 227 (316)
T 1ijq_A 211 PFSLAVFEDKVFWTDII 227 (316)
T ss_dssp EEEEEEETTEEEEEETT
T ss_pred cEEEEEECCEEEEEECC
Confidence 99999999999998754
No 40
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.82 E-value=5.3e-18 Score=172.60 Aligned_cols=229 Identities=18% Similarity=0.106 Sum_probs=154.3
Q ss_pred hhhhhhhhhcCCCcee-EEEcCCCcceeeeEEcCCCC-EEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCc
Q 039428 26 ISIELAIAMAKPATHV-YQYHSPSFLCETAKWDDVGR-RFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNAT 103 (335)
Q Consensus 26 ~~~~~~~~~~d~~~~~-~~~~~~~~~pegia~d~~g~-~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p 103 (335)
++....|...+..... ..+......|.++++++..+ +||++...++|++++. ++.... .....++ ...+ ..|
T Consensus 400 ~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l-~g~~~~--~~~~~vi-~~~l--~~P 473 (791)
T 3m0c_C 400 FTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQL-DRAHGV--SSYDTVI-SRDI--QAP 473 (791)
T ss_dssp EECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEE-CSSC--SCC
T ss_pred cccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEec-cCCCCC--cceeEEE-ecCC--CCc
Confidence 3344444444433222 22333345689999998644 5555577899999985 442100 0000132 2222 479
Q ss_pred ceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCC-CcEEEEeCCC-CeEEEEc
Q 039428 104 MGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE-GNAYVTDVVS-SKIWKVG 181 (335)
Q Consensus 104 ~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~-G~lyV~d~~~-~~I~~~d 181 (335)
.||++|..+++||+ +|... ++|.++++++......+. ..+..|++|++|+. |+||++|+.. ++|++++
T Consensus 474 ~GLAvD~~~~~LY~--tD~~~---~~I~v~~ldG~~~~~l~~-----~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~ 543 (791)
T 3m0c_C 474 DGLAVDWIHSNIYW--TDSVL---GTVSVADTKGVKRKTLFR-----ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 543 (791)
T ss_dssp CEEEEETTTTEEEE--EETTT---TEEEEEETTSSSEEEEEE-----CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred ceeeeeecCCcEEE--EecCC---CeEEEEeCCCCeEEEEEe-----CCCCCcceEEEecCCCCEEEecCCCCCeEEEEe
Confidence 99999976789999 56554 369999998775543322 12678999999986 8999999876 8999999
Q ss_pred cCCcEEEEecCCccccccccccccccCeEEEccC-CeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEc
Q 039428 182 VEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPD-GFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALL 260 (335)
Q Consensus 182 ~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~d-g~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d 260 (335)
++|...+.+... .+..|+||++|++ ++||++|...++|+++++++. ..+.+...+ ..+..|.||+++
T Consensus 544 ~dG~~~~~lv~~---------~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~--~~~~v~~~~-~~l~~P~glav~ 611 (791)
T 3m0c_C 544 LNGVDIYSLVTE---------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILEDE-KRLAHPFSLAVF 611 (791)
T ss_dssp TTSCCEEEEECS---------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEEECT-TTTSSEEEEEEE
T ss_pred cCCCceEEEEeC---------CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC--ceEEEecCC-CccCCCCEEEEe
Confidence 999876544322 2345999999975 599999999999999999987 333332222 225678899986
Q ss_pred CCCcEEEEecCCCeEEEEEcCCC
Q 039428 261 SPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 261 ~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
. ++||++++..+.|++++...+
T Consensus 612 ~-~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 612 E-DKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp T-TEEEEEETTTTEEEEEETTTC
T ss_pred C-CEEEEEECCCCEEEEEeCCCC
Confidence 4 599999887778877775444
No 41
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.81 E-value=1.7e-17 Score=157.03 Aligned_cols=213 Identities=14% Similarity=0.181 Sum_probs=149.0
Q ss_pred cCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCe----EEEE
Q 039428 68 LDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWK----RLFL 143 (335)
Q Consensus 68 ~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~----~~~~ 143 (335)
..+.|.+++.....+ . .++ +.+ ..+.||++|+.+++||+ +|...+ .|+++++++.. ....
T Consensus 90 ~~~~I~~i~l~~~~~-----~--~~~--~~~--~~~~~l~~d~~~~~lyw--sD~~~~---~I~~~~~~g~~~~~~~~~~ 153 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEY-----T--SLI--PNL--RNVVALDTEVASNRIYW--SDLSQR---MICSTQLDRAHGVSSYDTV 153 (400)
T ss_dssp ETTEEEEECTTSCSC-----E--EEE--CSC--SCEEEEEEETTTTEEEE--EETTTT---EEEEEEC------CCCEEE
T ss_pred ccceeEEEccCCcce-----e--Eec--ccc--CcceEEeeeeccCceEE--EecCCC---eEEEEEcccCCCCCcceEE
Confidence 467999998643331 2 132 222 47899999987899999 566543 59999987632 2211
Q ss_pred eecCCCccCCCCCCceeECC-CCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccC-CeEEEE
Q 039428 144 TQLSGKSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPD-GFLIVI 221 (335)
Q Consensus 144 ~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~d-g~Lyva 221 (335)
.. .....|.++++|. .|+||++|..+++|.+++++|+..+.+... .+..|+||+++|. |+||++
T Consensus 154 ~~-----~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~---------~~~~P~~iavdp~~g~ly~t 219 (400)
T 3p5b_L 154 IS-----RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE---------NGSKPRAIVVDPVHGFMYWT 219 (400)
T ss_dssp EC-----SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC---------SSCCEEEEEEETTTTEEEEE
T ss_pred Ee-----CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC---------CCCCcceEEEecccCeEEEE
Confidence 11 1267899999998 689999999999999999998765543211 2345999999984 599999
Q ss_pred ECC-CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcC-CCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCC
Q 039428 222 HMC-SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLS-PTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHR 299 (335)
Q Consensus 222 d~~-~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~-~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~ 299 (335)
|.. .++|+++++++. ..+.+...+ +..|.||++|+ +++||+++...+.|++++.+.... ..+... .....
T Consensus 220 d~~~~~~I~~~~~dG~--~~~~~~~~~---l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~--~~~l~ 291 (400)
T 3p5b_L 220 DWGTPAKIKKGGLNGV--DIYSLVTEN---IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILED--EKRLA 291 (400)
T ss_dssp ECSSSCCEEEEETTSC--SCEEEECSS---CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEEC--SSTTS
T ss_pred eCCCCCEEEEEeCCCC--ccEEEEECC---CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeC--CCCCC
Confidence 987 489999999986 333332222 56799999996 468999988778888888753321 122221 12356
Q ss_pred cceEEEEeCCeEEEEeccC
Q 039428 300 VATAATVKDGRVYLSHLLG 318 (335)
Q Consensus 300 ~Pt~va~~~g~lyV~~~~~ 318 (335)
.|.++++.+++||++++..
T Consensus 292 ~P~gl~v~~~~lywtd~~~ 310 (400)
T 3p5b_L 292 HPFSLAVFEDKVFWTDIIN 310 (400)
T ss_dssp SEEEEEEETTEEEEEESSS
T ss_pred CCEEEEEeCCEEEEecCCC
Confidence 7899999999999988543
No 42
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.81 E-value=2e-18 Score=158.79 Aligned_cols=236 Identities=10% Similarity=0.011 Sum_probs=154.7
Q ss_pred hhhhhcCCCceeE--EEcCCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcC--CCCcce
Q 039428 30 LAIAMAKPATHVY--QYHSPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVV--GNATMG 105 (335)
Q Consensus 30 ~~~~~~d~~~~~~--~~~~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~--~~~p~G 105 (335)
..+.+.|..+.++ .++ ....|++++++++|.+|+.+..+++|+++|..+++ +.. .+...... ...|.+
T Consensus 64 ~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~----~~~---~i~~g~~~~~~~~p~~ 135 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE----ITG---YIECPDMDMESGSTEQ 135 (328)
T ss_dssp TEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE----EEE---EEECTTCCTTTCBCCC
T ss_pred CEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe----EEE---EEEcCCccccCCCcce
Confidence 3455556654432 122 34579999998888655544578999999965443 122 22222100 026889
Q ss_pred EEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCC----------C
Q 039428 106 IAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVS----------S 175 (335)
Q Consensus 106 i~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~----------~ 175 (335)
|+++ +++|||++ .... +.|.++|++++++...+.. ...|+++++|++|++||++... +
T Consensus 136 i~~~--~~~lyv~~--~~~~--~~v~viD~~t~~~~~~i~~------g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~ 203 (328)
T 3dsm_A 136 MVQY--GKYVYVNC--WSYQ--NRILKIDTETDKVVDELTI------GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAP 203 (328)
T ss_dssp EEEE--TTEEEEEE--CTTC--CEEEEEETTTTEEEEEEEC------SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCC
T ss_pred EEEE--CCEEEEEc--CCCC--CEEEEEECCCCeEEEEEEc------CCCccceEEcCCCCEEEEECCCccCCccccCCc
Confidence 9995 79999963 3111 4699999999987755543 3468999999999999998765 8
Q ss_pred eEEEEccCCcEE-EEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCC
Q 039428 176 KIWKVGVEGQLL-SIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSL 253 (335)
Q Consensus 176 ~I~~~d~~g~~~-~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~ 253 (335)
.|+++|+++..+ ..+. .+ ....|++|+++||+ +||+++. +|+++|+.+++ +....... .....
T Consensus 204 ~v~~id~~t~~v~~~~~-----~~----~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~--~~~~~~~~-~~~~~ 268 (328)
T 3dsm_A 204 SLYRIDAETFTVEKQFK-----FK----LGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADR--VPVRPFLE-FRDTK 268 (328)
T ss_dssp EEEEEETTTTEEEEEEE-----CC----TTCCCEEEEECTTSCEEEEESS---SEEEEETTCSS--CCSSCSBC-CCSSC
T ss_pred eEEEEECCCCeEEEEEe-----cC----CCCCceeEEEecCCCEEEEEcc---EEEEEECCCCc--eeeeeeec-CCCCc
Confidence 999999975443 2221 11 12359999999987 8999976 89999998763 21111101 00256
Q ss_pred CCeEEEcC-CCcEEEEe----cCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe
Q 039428 254 GDGLALLS-PTKLVVAG----NPYPSARLVESSDGWETASVVAKFNGPTHRVATAATVK 307 (335)
Q Consensus 254 pdGia~d~-~g~l~va~----~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~ 307 (335)
|+||++|+ +|++||++ ..++.+.+++.. + +.+.++. .+..|.++++.
T Consensus 269 p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g----~~~~~i~--~G~~P~~~~~~ 320 (328)
T 3dsm_A 269 YYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-G----KLIDEFY--VGIIPGAFCWK 320 (328)
T ss_dssp EEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-C----CEEEEEE--EEESEEEEEEE
T ss_pred eEEEEEcCCCCeEEEEcccccccCCEEEEECCC-C----CEEEEEE--eccCcceEEEe
Confidence 99999998 68999998 544667777654 3 2233332 24457788874
No 43
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.81 E-value=5.4e-18 Score=168.81 Aligned_cols=223 Identities=16% Similarity=0.110 Sum_probs=150.1
Q ss_pred hhhhhhhhcCCCce--eEE-EcCCCcceeeeEEcCCCCEEEE-EecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCC
Q 039428 27 SIELAIAMAKPATH--VYQ-YHSPSFLCETAKWDDVGRRFLV-SFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNA 102 (335)
Q Consensus 27 ~~~~~~~~~d~~~~--~~~-~~~~~~~pegia~d~~g~~~~~-~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~ 102 (335)
+....|...+.... ... +......|.+++++++++.+|+ +..+++|++++. ++.. ..+ .++ ..++ ..
T Consensus 15 ~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~-~g~~----~~~-~v~-~~~~--~~ 85 (619)
T 3s94_A 15 ANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEF-NKTE----SVQ-NVV-VSGL--LS 85 (619)
T ss_dssp ECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC----------CE-EEE-CSSC--SC
T ss_pred eccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEc-cCCC----ceE-EEE-eCCC--CC
Confidence 44455555555432 222 2223346999999986555555 477899999985 4531 011 133 2222 37
Q ss_pred cceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCC-CcEEEEeCC-CCeEEEE
Q 039428 103 TMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE-GNAYVTDVV-SSKIWKV 180 (335)
Q Consensus 103 p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~-G~lyV~d~~-~~~I~~~ 180 (335)
|.||++|..+++||++ |... ++|.++|+++........ ..+..|++|++||. |.+|+||+. +++|++.
T Consensus 86 P~GlAvD~~~~~ly~~--d~~~---~~I~v~~~dG~~~~~l~~-----~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~ 155 (619)
T 3s94_A 86 PDGLACDWLGEKLYWT--DSET---NRIEVSNLDGSLRKVLFW-----QELDQPRAIALDPSSGFMYWTDWGEVPKIERA 155 (619)
T ss_dssp EEEEEEETTTTEEEEE--ETTT---TEEEEEETTSCSCEEEEC-----SSCSCCCCEEEETTTTEEEEEECSSSCEEEEE
T ss_pred cCeEEEEecCCEEEEE--eCCC---CEEEEEECCCCCEEEEEe-----CCCCCCceEEEecCCCeEEEeccCCCCEEEEE
Confidence 9999999778999994 5543 469999998765432221 12678999999996 889999976 6899999
Q ss_pred ccCCcEEEEecCCccccccccccccccCeEEEccC-CeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEE
Q 039428 181 GVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPD-GFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLAL 259 (335)
Q Consensus 181 d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~d-g~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~ 259 (335)
+++|...+.+... ....|+||++|++ ++||++|...++|+++++++. ..+.+. .+ . +..|.||++
T Consensus 156 ~~dG~~~~~l~~~---------~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~--~~~~~~-~~-~-~~~P~gi~~ 221 (619)
T 3s94_A 156 GMDGSSRFIIINS---------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT--NRQAVV-KG-S-LPHPFALTL 221 (619)
T ss_dssp ETTSCSCEEEECS---------SCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCC--EEC------------CCCEEE
T ss_pred ECCCCceEEEEeC---------CCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC--ccEEEE-eC-C-CCCceEEEE
Confidence 9998765443221 2345999999986 599999999999999999986 444432 12 1 567999999
Q ss_pred cCCCcEEEEecCCCeEEEEEcCCC
Q 039428 260 LSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 260 d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
+.+ ++|++++..+++.+++...+
T Consensus 222 ~~~-~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 222 FED-ILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp SSS-EEEEECTTTCSEEEEESSSC
T ss_pred eCC-EEEEecCCCCEEEEEECCCC
Confidence 976 99999987788888886544
No 44
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.81 E-value=2.7e-17 Score=153.11 Aligned_cols=259 Identities=16% Similarity=0.129 Sum_probs=159.0
Q ss_pred CCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCC-c-CCCCcceEEEeCC---CCeEEEEEe
Q 039428 46 SPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDD-V-VGNATMGIAVDRP---RNRLLVAFT 120 (335)
Q Consensus 46 ~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~-~-~~~~p~Gi~~d~~---~g~l~v~~~ 120 (335)
..-..|++++++++|++|++.. .++|++++ .+++ + .+...+- . ....+.||+++++ ++.|||+..
T Consensus 26 ~~l~~P~~ia~~pdG~l~V~e~-~g~I~~~d-~~G~---~-----~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~ 95 (354)
T 3a9g_A 26 SDLEVPWSIAPLGGGRYLVTER-PGRLVLIS-PSGK---K-----LVASFDVANVGEAGLLGLALHPEFPKKSWVYLYAS 95 (354)
T ss_dssp CSCSCEEEEEEEETTEEEEEET-TTEEEEEC-SSCE---E-----EEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CCCCCCeEEEEcCCCeEEEEeC-CCEEEEEe-CCCc---e-----EeeccceeecCCCceeeEEeCCCCCcCCEEEEEEe
Confidence 3345799999999998666654 49999997 4453 1 1221120 0 1146899999985 689999754
Q ss_pred c--CCCCccceEEEEECCCC--eE---E-EEeecCCCccCCCCCCceeECCCCcEEEEeC-------------CCCeEEE
Q 039428 121 D--VLGNKYSALAAYDLSTW--KR---L-FLTQLSGKSEEKSTADDIAVDAEGNAYVTDV-------------VSSKIWK 179 (335)
Q Consensus 121 D--~~~~~~~~v~~~d~~~~--~~---~-~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~-------------~~~~I~~ 179 (335)
. ..+...++|.+++.+++ .+ . ....++ ....+.++++++++||+|||+.. ..++|+|
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~--~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~r 173 (354)
T 3a9g_A 96 YFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIP--GAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILR 173 (354)
T ss_dssp EECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEE--CCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEE
T ss_pred ccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCC--CCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEE
Confidence 2 11111146999998754 11 1 111222 12256799999999999999953 2479999
Q ss_pred EccCCcEEEEecCCcccccc-ccccccccCeEEEcc-CCeEEEEECCCC---EEEEEeCCCCce------------eE-E
Q 039428 180 VGVEGQLLSIIRSPLFTAKE-WYKNVFGLNGIVYHP-DGFLIVIHMCSG---NLFKIDIRKEEE------------EV-K 241 (335)
Q Consensus 180 ~d~~g~~~~~~~~~~~~~~~-~~~~~~~p~Gia~~~-dg~Lyvad~~~~---~v~~~d~~~~~~------------~~-~ 241 (335)
++++|+... +++ |..++ ....+.+|+||++++ +|+||+++...+ .|.++.....-+ .. -
T Consensus 174 i~~dG~~p~--~np-f~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p 250 (354)
T 3a9g_A 174 VDEEGRPPA--DNP-FPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDP 250 (354)
T ss_dssp ECTTSCCCT--TSS-STTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCC
T ss_pred EcCCCCCCC--CCC-CCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCC
Confidence 999986311 000 10000 112345799999999 679999998875 466665433100 00 0
Q ss_pred EEeccCCcCCCCCCeEEE-------cCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe-CCeEEE
Q 039428 242 LIELRGGSSLSLGDGLAL-------LSPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATVK-DGRVYL 313 (335)
Q Consensus 242 ~~~~~g~~~~~~pdGia~-------d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~-~g~lyV 313 (335)
.+.... ....|.||++ +.+|++|+++...+.++++....+.+..+ ...+-......|.+++++ +|+|||
T Consensus 251 ~~~~~~--~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~~rp~~v~~~pDG~lyv 327 (354)
T 3a9g_A 251 VIDTGS--ETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRK-ISTFFKNVFGRLRDVVIDDDGGILI 327 (354)
T ss_dssp SEECTT--CCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEE-EEEECTTTSCCEEEEEECTTSCEEE
T ss_pred EeecCC--CCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccc-eeeeccCCCCCeeEEEECCCCcEEE
Confidence 111100 1235999999 46789999988667888887764322211 112211124458899997 899999
Q ss_pred Eec--cCCCCC
Q 039428 314 SHL--LGLGFP 322 (335)
Q Consensus 314 ~~~--~~~~~~ 322 (335)
++. .|++.|
T Consensus 328 ~~~~~~G~g~~ 338 (354)
T 3a9g_A 328 STSNRDGRGSL 338 (354)
T ss_dssp EECTTSSSSCC
T ss_pred EEeCCCCCcCC
Confidence 775 355555
No 45
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.79 E-value=2.2e-17 Score=164.62 Aligned_cols=198 Identities=18% Similarity=0.159 Sum_probs=147.6
Q ss_pred cceeeeEEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 49 FLCETAKWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
..|.++++|++++.+|++ ..+++|++++. ++.. .+ .++ ..+. ..|.||++|..+++||+ +|...
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~-~g~~----~~--~v~-~~g~--~~P~GlAvD~~~~~LY~--tD~~~--- 101 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFM-NGSA----LE--HVV-EFGL--DYPEGMAVDWLGKNLYW--ADTGT--- 101 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEET-TSCS----CE--EEE-CSSC--SCCCEEEEETTTTEEEE--EETTT---
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEEC-CCCC----cE--EEE-eCCC--CCcceEEEEeCCCEEEE--EECCC---
Confidence 368999999875555555 88899999985 4542 12 233 2232 37999999977899999 45544
Q ss_pred ceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC-CCcEEEEeCC-CCeEEEEccCCcEEEEecCCcccccccccccc
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVV-SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVF 205 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~-~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~ 205 (335)
++|.++++++........ ..+..|+++++|| +|.+|++|+. +++|++++++|...+.+.. .+.
T Consensus 102 ~~I~v~~~dG~~~~~l~~-----~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~----------~~~ 166 (628)
T 4a0p_A 102 NRIEVSKLDGQHRQVLVW-----KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP----------NVG 166 (628)
T ss_dssp TEEEEEETTSTTCEEEEC-----SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC----------SCS
T ss_pred CEEEEEecCCCcEEEEEe-----CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC----------CCC
Confidence 469999998764332221 1267899999998 6899999976 7899999999876554322 234
Q ss_pred ccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 206 GLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 206 ~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
.|+||++|+++ +||++|..+++|+++++++. ..+.+.. . +..|.|++++. +++|++++..+.+.+++...+
T Consensus 167 ~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~--~~~v~~~-~---l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 167 RANGLTIDYAKRRLYWTDLDTNLIESSNMLGL--NREVIAD-D---LPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEEE-C---CSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred CcceEEEccccCEEEEEECCCCEEEEEcCCCC--ceEEeec-c---CCCceEEEEEC-CEEEEecCCCCEEEEEECCCC
Confidence 59999999965 99999999999999999986 3344432 1 56799999996 799999887678887775544
No 46
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.79 E-value=5.8e-17 Score=150.73 Aligned_cols=257 Identities=15% Similarity=0.083 Sum_probs=156.4
Q ss_pred CCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCc--CCCCcceEEEeCC---CCeEEEEEec
Q 039428 47 PSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDV--VGNATMGIAVDRP---RNRLLVAFTD 121 (335)
Q Consensus 47 ~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~--~~~~p~Gi~~d~~---~g~l~v~~~D 121 (335)
.-..|++++++++|++|++.. .++|++++ +++. + .+...+-. ....|+||+++++ ++.|||+...
T Consensus 29 ~l~~P~~ia~~pdG~l~V~e~-~g~I~~i~--~g~~-----~--~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 29 GLEVPWALAFLPDGGMLIAER-PGRIRLFR--EGRL-----S--TYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTV 98 (352)
T ss_dssp CCSCEEEEEECTTSCEEEEET-TTEEEEEE--TTEE-----E--EEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred CCCCceEEEEcCCCeEEEEeC-CCeEEEEE--CCCc-----c--EeecceEeecCCCCceeEEECCCCCCCCEEEEEEec
Confidence 344799999999999766664 49999998 3431 1 12222210 1247999999985 5899997543
Q ss_pred CCCCccceEEEEECCCCeE---E-EEeecCCCccCCCCCCceeECCCCcEEEEeC-------------CCCeEEEEccCC
Q 039428 122 VLGNKYSALAAYDLSTWKR---L-FLTQLSGKSEEKSTADDIAVDAEGNAYVTDV-------------VSSKIWKVGVEG 184 (335)
Q Consensus 122 ~~~~~~~~v~~~d~~~~~~---~-~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~-------------~~~~I~~~d~~g 184 (335)
......++|.+++.+++.+ . ....++......+.++++++++||++||++. ..++|+|++++|
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp CTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred CCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 2111114699999875422 1 1112321012257889999999999999963 237999999998
Q ss_pred cEEEEecCCccc-----ccc-ccccccccCeEEEcc-CCeEEEEECCCCE--------EEEEeCCCCce-----------
Q 039428 185 QLLSIIRSPLFT-----AKE-WYKNVFGLNGIVYHP-DGFLIVIHMCSGN--------LFKIDIRKEEE----------- 238 (335)
Q Consensus 185 ~~~~~~~~~~~~-----~~~-~~~~~~~p~Gia~~~-dg~Lyvad~~~~~--------v~~~d~~~~~~----------- 238 (335)
+... ++ .|. .++ ....+.+|+||++++ +|+||+++...+. |.++...+.-+
T Consensus 179 ~~p~--~n-pf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~ 255 (352)
T 2ism_A 179 EPAP--GN-PFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDP 255 (352)
T ss_dssp SBCT--TC-TTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCT
T ss_pred CCCC--CC-cccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCC
Confidence 5321 11 111 000 112345799999999 6799999988776 66665543100
Q ss_pred -eE-EEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCc---EEEEEeeeecCCCCCcceEEEEe-CCeEE
Q 039428 239 -EV-KLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGW---ETASVVAKFNGPTHRVATAATVK-DGRVY 312 (335)
Q Consensus 239 -~~-~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~---~~~~~~~~~~~p~~~~Pt~va~~-~g~ly 312 (335)
.. -.+.... ...|.||++ .+|++|+++...+.++++....+. +..+...-+. ....|++++++ +|+||
T Consensus 256 ~~~~p~~~~~~---~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~--~~~rp~~v~~~pdG~ly 329 (352)
T 2ism_A 256 RYRDPLYFWPQ---GFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS--GFGRLREVQVGPDGALY 329 (352)
T ss_dssp TSCCCSEECTT---CCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE--SSCCEEEEEECTTSCEE
T ss_pred CCcCCeEecCC---CCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecc--cCCCeeEEEECCCCcEE
Confidence 00 0011111 235899999 578999998766778777764321 1111111121 23458999997 89999
Q ss_pred EEecc--CCCCC
Q 039428 313 LSHLL--GLGFP 322 (335)
Q Consensus 313 V~~~~--~~~~~ 322 (335)
|+++. |.|.|
T Consensus 330 v~~~~~~g~g~~ 341 (352)
T 2ism_A 330 VTTSNRDGRGQV 341 (352)
T ss_dssp EEECSTTTTSCC
T ss_pred EEEeCCCCCCCC
Confidence 97764 45555
No 47
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.79 E-value=2.7e-17 Score=150.84 Aligned_cols=211 Identities=14% Similarity=0.107 Sum_probs=147.8
Q ss_pred CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEE-EEeecC
Q 039428 69 DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRL-FLTQLS 147 (335)
Q Consensus 69 ~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~-~~~~~~ 147 (335)
.+.|.+++.. +.. .+. ..+ ..+. ..+.+|.+|+.+++||+ .|...+ +|.+++++++... ....
T Consensus 12 ~~~I~~i~l~-~~~----~~~-~~~-~~~~--~~~~~ld~d~~~~~lyw--~D~~~~---~I~r~~~~g~~~~~~~~~-- 75 (318)
T 3sov_A 12 RRDLRLVDAT-NGK----ENA-TIV-VGGL--EDAAAVDFVFSHGLIYW--SDVSEE---AIKRTEFNKTESVQNVVV-- 75 (318)
T ss_dssp EEEEEEEETT-CTT----SCC-EEE-EEEE--EEEEEEEEEGGGTEEEE--EETTTT---EEEEEETTSSSCCCEEEE--
T ss_pred cCeEEEEECC-CCc----eEE-EEE-ecCC--CccEEEEEEeCCCEEEE--EECCCC---cEEEEEccCCCceEEEEc--
Confidence 4689999864 431 010 111 1121 25679999987899999 566543 5999999876321 1111
Q ss_pred CCccCCCCCCceeECC-CCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccC-CeEEEEECC-
Q 039428 148 GKSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPD-GFLIVIHMC- 224 (335)
Q Consensus 148 ~~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~d-g~Lyvad~~- 224 (335)
.++..|.++++|+ .|++|++|..+++|.+++++|+..+.+... .+..|+||+++|. |+||++|..
T Consensus 76 ---~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~---------~~~~P~giavdp~~g~ly~td~~~ 143 (318)
T 3sov_A 76 ---SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ---------ELDQPRAIALDPSSGFMYWTDWGE 143 (318)
T ss_dssp ---ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS---------SCSSEEEEEEEGGGTEEEEEECSS
T ss_pred ---CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeC---------CCCCccEEEEeCCCCEEEEEecCC
Confidence 1257899999997 679999999999999999998765433221 2345999999985 699999976
Q ss_pred CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcC-CCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceE
Q 039428 225 SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLS-PTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATA 303 (335)
Q Consensus 225 ~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~-~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~ 303 (335)
.++|+|+++++. ..+.+...+ +..|.||++|+ +++||+++...+.|++++.+..... .+.. .....|.+
T Consensus 144 ~~~I~r~~~dG~--~~~~~~~~~---l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~-~~~~----~~~~~P~g 213 (318)
T 3sov_A 144 VPKIERAGMDGS--SRFIIINSE---IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ-AVVK----GSLPHPFA 213 (318)
T ss_dssp SCEEEEEETTSC--SCEEEECSS---CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEEC----SCCSCEEE
T ss_pred CCEEEEEEcCCC--CeEEEEECC---CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceE-EEec----CCCCCceE
Confidence 789999999986 333332122 56799999997 5789999887788888886532221 1221 23567899
Q ss_pred EEEeCCeEEEEecc
Q 039428 304 ATVKDGRVYLSHLL 317 (335)
Q Consensus 304 va~~~g~lyV~~~~ 317 (335)
+++++++||++++.
T Consensus 214 lav~~~~lywtd~~ 227 (318)
T 3sov_A 214 LTLFEDILYWTDWS 227 (318)
T ss_dssp EEEETTEEEEEETT
T ss_pred EEEeCCEEEEEecC
Confidence 99999999998754
No 48
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.78 E-value=1.3e-16 Score=146.61 Aligned_cols=247 Identities=13% Similarity=0.071 Sum_probs=166.6
Q ss_pred hhhhhhcCCCceeEEEc--------CCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCC
Q 039428 29 ELAIAMAKPATHVYQYH--------SPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVG 100 (335)
Q Consensus 29 ~~~~~~~d~~~~~~~~~--------~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~ 100 (335)
...+.+.|+.+.++... ..+..|++++++. +.+|+++..+++|.++|..+++ ++. .+ +. +
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~----~~~---~i--~~--~ 83 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFK----EVG---RI--TG--F 83 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET-TEEEEEEGGGTEEEEEETTTCC----EEE---EE--EC--C
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC-CEEEEEEcCCCEEEEEECcccE----EEE---Ec--CC--C
Confidence 34556666665554321 1234689999863 4566665778999999975554 222 22 21 2
Q ss_pred CCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeC-CCCeEEE
Q 039428 101 NATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDV-VSSKIWK 179 (335)
Q Consensus 101 ~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~-~~~~I~~ 179 (335)
..|.+|++++ ++++||++. .. +.|.++|++++++...+...........|.++++ .++++||+++ ..++|.+
T Consensus 84 ~~p~~i~~~~-~g~lyv~~~--~~---~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~v 156 (328)
T 3dsm_A 84 TSPRYIHFLS-DEKAYVTQI--WD---YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILK 156 (328)
T ss_dssp SSEEEEEEEE-TTEEEEEEB--SC---SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEE
T ss_pred CCCcEEEEeC-CCeEEEEEC--CC---CeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEE
Confidence 4789999976 679999642 11 4699999999987755554221111348999999 5788999998 4899999
Q ss_pred EccCCcE-EEEecCCccccccccccccccCeEEEccCCeEEEEECCC----------CEEEEEeCCCCceeEEEEeccCC
Q 039428 180 VGVEGQL-LSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCS----------GNLFKIDIRKEEEEVKLIELRGG 248 (335)
Q Consensus 180 ~d~~g~~-~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~----------~~v~~~d~~~~~~~~~~~~~~g~ 248 (335)
+|++... ...+. ....|++++++++|++|++.... ++|+++|+++.+ ....+.+...
T Consensus 157 iD~~t~~~~~~i~-----------~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~-v~~~~~~~~g 224 (328)
T 3dsm_A 157 IDTETDKVVDELT-----------IGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT-VEKQFKFKLG 224 (328)
T ss_dssp EETTTTEEEEEEE-----------CSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE-EEEEEECCTT
T ss_pred EECCCCeEEEEEE-----------cCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe-EEEEEecCCC
Confidence 9987543 33221 12358999999999999998875 899999998773 4445554321
Q ss_pred cCCCCCCeEEEcCCC-cEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe--CCeEEEEe
Q 039428 249 SSLSLGDGLALLSPT-KLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATVK--DGRVYLSH 315 (335)
Q Consensus 249 ~~~~~pdGia~d~~g-~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~--~g~lyV~~ 315 (335)
..|.+|++++++ .+|+++. .+.+++...+... ....+. .....|.+++++ +++|||+.
T Consensus 225 ---~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~--~~~~~~-~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 225 ---DWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVP--VRPFLE-FRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp ---CCCEEEEECTTSCEEEEESS---SEEEEETTCSSCC--SSCSBC-CCSSCEEEEEECTTTCCEEEEE
T ss_pred ---CCceeEEEecCCCEEEEEcc---EEEEEECCCCcee--eeeeec-CCCCceEEEEEcCCCCeEEEEc
Confidence 359999999875 6888865 5788876544110 001111 114679999995 79999987
No 49
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.78 E-value=3e-17 Score=150.12 Aligned_cols=202 Identities=17% Similarity=0.106 Sum_probs=140.2
Q ss_pred ceeeeEEcC-CCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEee-cCCcCCCCcceEEEeCCCCeEEEEEecCCC---
Q 039428 50 LCETAKWDD-VGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVK-EDDVVGNATMGIAVDRPRNRLLVAFTDVLG--- 124 (335)
Q Consensus 50 ~pegia~d~-~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~-~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~--- 124 (335)
.|.++++++ +|++|+++. .+.|+++|+.++. ++ .+.. ..+.....|++|++|+++|+||++ |...
T Consensus 81 ~p~gi~~~~~~g~l~v~d~-~~~i~~~d~~~g~-----~~--~~~~~~~~~~~~~p~~i~~d~~~G~l~v~--d~~~~~~ 150 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDC-YYHLSVVGSEGGH-----AT--QLATSVDGVPFKWLYAVTVDQRTGIVYFT--DVSTLYD 150 (322)
T ss_dssp CEEEEEEETTTTEEEEEET-TTEEEEECTTCEE-----CE--EEESEETTEECSCEEEEEECTTTCCEEEE--ESCSSCC
T ss_pred CCceEEEcCCCCcEEEEEC-CCCEEEEeCCCCE-----EE--EecccCCCCcccccceEEEecCCCEEEEE--CCccccc
Confidence 489999997 777776664 3569999854332 12 1221 111122468999999536899995 4321
Q ss_pred -----------CccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCCcE---EEE
Q 039428 125 -----------NKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEGQL---LSI 189 (335)
Q Consensus 125 -----------~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g~~---~~~ 189 (335)
...+.|+++|+++++...... .+..|++++++++|+ +||+|+.+++|++++.++.. .+.
T Consensus 151 ~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~------~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~ 224 (322)
T 2fp8_A 151 DRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK------ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEV 224 (322)
T ss_dssp TTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE------EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEE
T ss_pred ccccceehcccCCCceEEEEeCCCCEEEEecc------CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccce
Confidence 111569999998887653221 157899999999986 99999999999999988531 111
Q ss_pred ecCCccccccccccccccCeEEEccCCeEEEEECC----------CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEE
Q 039428 190 IRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMC----------SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLAL 259 (335)
Q Consensus 190 ~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~----------~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~ 259 (335)
+ .. ..+|+||+++++|+|||++.. .++|+++++++. ....+..+.+..+..|.+++.
T Consensus 225 ~-----~~------~~gP~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~--~~~~~~~~~g~~~~~~~~~~~ 291 (322)
T 2fp8_A 225 L-----VK------IPNPGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGN--ILEVIPLPPPFAGEHFEQIQE 291 (322)
T ss_dssp E-----EE------CSSEEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSC--EEEEEECCTTTTTSCCCEEEE
T ss_pred E-----Ee------CCCCCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCC--EEEEEECCCCCccccceEEEE
Confidence 1 10 112999999999999999976 578999999866 666676543222567888887
Q ss_pred cCCCcEEEEecCCCeEEEEEcC
Q 039428 260 LSPTKLVVAGNPYPSARLVESS 281 (335)
Q Consensus 260 d~~g~l~va~~~~~~~~v~~~~ 281 (335)
+ +|+|||++...+.+.+++..
T Consensus 292 ~-~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 292 H-DGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp E-TTEEEEECSSCSEEEEEEC-
T ss_pred e-CCEEEEeecCCCceEEEecc
Confidence 4 78999997655778777654
No 50
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.78 E-value=6.9e-17 Score=160.83 Aligned_cols=199 Identities=17% Similarity=0.138 Sum_probs=146.0
Q ss_pred ceeeeEEcCCC-CEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 50 LCETAKWDDVG-RRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 50 ~pegia~d~~g-~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
.|.++++|+.+ .+||++...++|++++. ++.. .+ .++ ..++ ..|.||++|..+++||+ +|... +
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~-~g~~----~~--~v~-~~~~--~~p~GlAvD~~~~~lY~--tD~~~---~ 414 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFI-DGSG----SQ--FVV-TAQI--AHPDGIAVDWVARNLYW--TDTGT---D 414 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEET-TSCS----CE--EEE-CSSC--SCCCEEEEETTTTEEEE--EETTT---T
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEc-CCCc----cE--EEE-ECCC--CCcCceEEecccCcEEE--EeCCC---C
Confidence 57899999854 45555577899999985 4541 12 233 2222 47899999966899999 46543 4
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCC-CcEEEEeCCC-CeEEEEccCCcEEEEecCCccccccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE-GNAYVTDVVS-SKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~-G~lyV~d~~~-~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (335)
.|.++++++........ .++..|+++++||. |.+|++|+.. ++|++.+.+|.....+... .+..
T Consensus 415 ~I~v~~~~G~~~~~l~~-----~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~---------~l~~ 480 (619)
T 3s94_A 415 RIEVTRLNGTMRKILIS-----EDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNT---------SLGW 480 (619)
T ss_dssp EEEEEETTSCSCEEEEC-----TTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS---------SCSC
T ss_pred cEEEEeCCCCeEEEEEE-----CCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeC---------CCCC
Confidence 69999998764332221 13789999999995 9999999874 8999999998755443222 2345
Q ss_pred cCeEEEccC-CeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 207 LNGIVYHPD-GFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 207 p~Gia~~~d-g~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
|+||++|++ ++||++|...++|.++++++. ..+.+...+ +..|.||+++.+ .||++++..+++..++...+
T Consensus 481 P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~--~~~~~~~~~---l~~P~glav~~~-~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 481 PNGLALDYDEGKIYWGDAKTDKIEVMNTDGT--GRRVLVEDK---IPHIFGFTLLGD-YVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSC--CCEEEEECC---CCSSCCEEEETT-EEEEECTTSSCEEEEESSSC
T ss_pred CeeeEEcccCCEEEEEECCCCEEEEEecCCC--ceEEEeccC---CCCcEEEEEECC-EEEEeecCCCeEEEEEcCCC
Confidence 999999985 599999999999999999886 333332122 567999999864 99999887778888876655
No 51
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.77 E-value=1.2e-16 Score=162.63 Aligned_cols=212 Identities=14% Similarity=0.182 Sum_probs=147.9
Q ss_pred CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeE----EEEe
Q 039428 69 DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKR----LFLT 144 (335)
Q Consensus 69 ~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~----~~~~ 144 (335)
...|.+++.....+ . .++ +.+ ..+.||++|..+++||+ +|...+ +|+++++++... ...+
T Consensus 403 ~~~Ir~i~l~~~~~-----~--~l~--~~~--~~~~gl~~d~~~~~lY~--sD~~~~---~I~~~~l~g~~~~~~~~~vi 466 (791)
T 3m0c_C 403 RHEVRKMTLDRSEY-----T--SLI--PNL--RNVVALDTEVASNRIYW--SDLSQR---MICSTQLDRAHGVSSYDTVI 466 (791)
T ss_dssp BSSEEEECTTSCCC-----E--EEE--CSC--SSEEEEEEETTTTEEEE--EETTTT---EEEEEEC--------CEEEE
T ss_pred ccceeEeeccCCcc-----e--eee--cCC--CceEEEeecccCCeeEE--eeccce---eEEEEeccCCCCCcceeEEE
Confidence 46788887533331 1 132 222 47899999987899999 566543 599999876321 2111
Q ss_pred ecCCCccCCCCCCceeECCCC-cEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccC-CeEEEEE
Q 039428 145 QLSGKSEEKSTADDIAVDAEG-NAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPD-GFLIVIH 222 (335)
Q Consensus 145 ~~~~~~~~~~~p~~~~vd~~G-~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~d-g~Lyvad 222 (335)
. ..+..|.+|++|..+ +||++|+.+++|++++++|+..+.+... .+..|+|||++|. |+||++|
T Consensus 467 ~-----~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~---------~l~~P~gIaVDp~~g~LYwtD 532 (791)
T 3m0c_C 467 S-----RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE---------NGSKPRAIVVDPVHGFMYWTD 532 (791)
T ss_dssp C-----SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC---------TTCCEEEEEEETTTTEEEEEE
T ss_pred e-----cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeC---------CCCCcceEEEecCCCCEEEec
Confidence 1 126789999999865 8999999999999999999876544221 2345999999996 6999999
Q ss_pred CCC-CEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcC-CCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCc
Q 039428 223 MCS-GNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLS-PTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRV 300 (335)
Q Consensus 223 ~~~-~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~-~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~ 300 (335)
.+. ++|+++++++. ..+.+...+ +..|.||++|+ +++||+++.+.+.|++++.+..... .+... ...+..
T Consensus 533 ~g~~~~I~~~~~dG~--~~~~lv~~~---l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~-~v~~~--~~~l~~ 604 (791)
T 3m0c_C 533 WGTPAKIKKGGLNGV--DIYSLVTEN---IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TILED--EKRLAH 604 (791)
T ss_dssp CSSSCEEEEEETTSC--CEEEEECSS---CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEEEC--TTTTSS
T ss_pred CCCCCeEEEEecCCC--ceEEEEeCC---CCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceE-EEecC--CCccCC
Confidence 886 89999999987 444443222 57799999994 5799999887788888887533222 22221 123456
Q ss_pred ceEEEEeCCeEEEEeccC
Q 039428 301 ATAATVKDGRVYLSHLLG 318 (335)
Q Consensus 301 Pt~va~~~g~lyV~~~~~ 318 (335)
|.++++.+++||++++..
T Consensus 605 P~glav~~~~lYwtD~~~ 622 (791)
T 3m0c_C 605 PFSLAVFEDKVFWTDIIN 622 (791)
T ss_dssp EEEEEEETTEEEEEETTT
T ss_pred CCEEEEeCCEEEEEECCC
Confidence 889999899999987643
No 52
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.77 E-value=2.3e-16 Score=157.27 Aligned_cols=210 Identities=12% Similarity=0.114 Sum_probs=153.1
Q ss_pred cCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecC
Q 039428 68 LDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLS 147 (335)
Q Consensus 68 ~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~ 147 (335)
..+.|.+++...... . ..+..+++ ..|.||++|+.+++||+ +|... .+|.++++++.........
T Consensus 13 ~~~~I~~i~l~~~~~-----~--~~~~~~~~--~~~~~l~~d~~~~~lyw--tD~~~---~~I~r~~~~g~~~~~v~~~- 77 (628)
T 4a0p_A 13 RRADIRRISLETNNN-----N--VAIPLTGV--KEASALDFDVTDNRIYW--TDISL---KTISRAFMNGSALEHVVEF- 77 (628)
T ss_dssp ETTEEEEEESSCTTC-----E--EECCCCSC--SCEEEEEEETTTTEEEE--EETTT---TEEEEEETTSCSCEEEECS-
T ss_pred eCCcEEEEECCCCCc-----c--eEEEcCCC--CceEEEEEECCCCEEEE--EECCC---CeEEEEECCCCCcEEEEeC-
Confidence 467999998643321 1 12222332 37899999988899999 56654 3599999987654432221
Q ss_pred CCccCCCCCCceeECCC-CcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCeEEEcc-CCeEEEEECC-
Q 039428 148 GKSEEKSTADDIAVDAE-GNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHP-DGFLIVIHMC- 224 (335)
Q Consensus 148 ~~~~~~~~p~~~~vd~~-G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~-dg~Lyvad~~- 224 (335)
+...|.|+++|.. |++|++|...++|.+++++|+..+.+... .+..|++|+++| +|.||++|.+
T Consensus 78 ----g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~---------~l~~P~~iavdp~~G~lY~tD~g~ 144 (628)
T 4a0p_A 78 ----GLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWK---------DLDSPRALALDPAEGFMYWTEWGG 144 (628)
T ss_dssp ----SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECS---------SCCCEEEEEEETTTTEEEEEECSS
T ss_pred ----CCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeC---------CCCCcccEEEccCCCeEEEeCCCC
Confidence 2568999999975 78999999999999999998765433221 234599999998 5799999976
Q ss_pred CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCC-CcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceE
Q 039428 225 SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSP-TKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATA 303 (335)
Q Consensus 225 ~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~-g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~ 303 (335)
+++|+|+++++. ..+.+. .+ +..|.|+++|++ ++||+++...+.+++++.+.... +++.. .+..|.+
T Consensus 145 ~~~I~r~~~dG~--~~~~l~-~~---~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~--~v~~~----~l~~P~g 212 (628)
T 4a0p_A 145 KPKIDRAAMDGS--ERTTLV-PN---VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR--EVIAD----DLPHPFG 212 (628)
T ss_dssp SCEEEEEETTSC--SCEEEE-CS---CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEE----CCSCEEE
T ss_pred CCEEEEEeCCCC--ceEEEE-CC---CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce--EEeec----cCCCceE
Confidence 789999999987 344432 22 567999999985 68999988778888888754322 22222 2456889
Q ss_pred EEEeCCeEEEEecc
Q 039428 304 ATVKDGRVYLSHLL 317 (335)
Q Consensus 304 va~~~g~lyV~~~~ 317 (335)
+++.+++||++++.
T Consensus 213 lav~~~~ly~tD~~ 226 (628)
T 4a0p_A 213 LTQYQDYIYWTDWS 226 (628)
T ss_dssp EEEETTEEEEEETT
T ss_pred EEEECCEEEEecCC
Confidence 99999999998864
No 53
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=9.2e-17 Score=154.48 Aligned_cols=245 Identities=10% Similarity=0.024 Sum_probs=158.5
Q ss_pred hhhhhhhhh--hhhhhhcCCCceeEEEc-----------CCC----cceeeeEE-------cCCCCEEEEE-ecC-----
Q 039428 20 IPIAYIISI--ELAIAMAKPATHVYQYH-----------SPS----FLCETAKW-------DDVGRRFLVS-FLD----- 69 (335)
Q Consensus 20 ~p~~~~~~~--~~~~~~~d~~~~~~~~~-----------~~~----~~pegia~-------d~~g~~~~~~-~~~----- 69 (335)
.|.++.++. ...+++++...+.+.+- ... ..|.+++| +++|+.+|+. ...
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 355666663 45566665544444321 111 14999999 9999955555 433
Q ss_pred -CeEEEEECCC-CCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECC-------CCeE
Q 039428 70 -GGVGQVLVPD-EYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLS-------TWKR 140 (335)
Q Consensus 70 -~~I~~~d~~~-g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~-------~~~~ 140 (335)
..|++++... +.+... .....+ +. +..|+|+++++.+++||++ |... ++|++||++ ++.+
T Consensus 220 ~~~V~~i~r~~~G~~~~~--~~~~~v--~~--~~~p~giavdp~~g~LYvt--d~~~---g~V~r~d~~~~~~~~~tg~~ 288 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDR--SDIQLI--AA--YKQCNGATIHPINGELYFN--SYEK---GQVFRLDLVDYFKTIKNGGS 288 (496)
T ss_dssp EEEEEEEECCTTSCCSTT--SCEEEE--EE--ESCCCCEEECTTTCCEEEE--ETTT---TEEEEECHHHHHHHHHTTCC
T ss_pred CceEEEEecCCCCceeec--ccceee--cc--CCCceEEEEcCCCCeEEEE--ECCC---CEEEEEecccccccccCcee
Confidence 2488996332 242100 000011 11 2478999999878999994 5543 359999997 5543
Q ss_pred -----------E-EEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCCcE------EEEecC---Cccc-c
Q 039428 141 -----------L-FLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEGQL------LSIIRS---PLFT-A 197 (335)
Q Consensus 141 -----------~-~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g~~------~~~~~~---~~~~-~ 197 (335)
. ..... + ....|.+++++++|+ +||+|+.+++|++++.++.. ..+.+. ..+. .
T Consensus 289 ~tp~~~~~~g~~~~l~~~---~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG 364 (496)
T 3kya_A 289 WDPIVKNNPNTFKQLFTI---A-DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDD 364 (496)
T ss_dssp CCCBGGGCTTTEEEEEEC---S-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCC
T ss_pred ecccccccccccceeEec---C-CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCC
Confidence 1 11222 1 145788999999998 89999999999998887632 223332 1111 1
Q ss_pred ccccccccccC-eEEEc-------cCCeEEEEECCCCEEEEEeCCCCceeEEEEecc------------C--------Cc
Q 039428 198 KEWYKNVFGLN-GIVYH-------PDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELR------------G--------GS 249 (335)
Q Consensus 198 ~~~~~~~~~p~-Gia~~-------~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~------------g--------~~ 249 (335)
+.....+..|. |++++ ++|.|||+|+.+++|.+|++++ .+..+.-. | ..
T Consensus 365 ~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G---~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a 441 (496)
T 3kya_A 365 VGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEG---IVSTYAGRGASTSLADGNQWGTDDGDLREVA 441 (496)
T ss_dssp BGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTC---BEEEEEESCTTHHHHHSCSCCCCCEETTTTC
T ss_pred cccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCC---CEEEEecccccccccCccccccCCCCchhhh
Confidence 12234567799 88887 5789999999999999999765 34444321 1 01
Q ss_pred CCCCCCeEEEcCC-CcEEEEecCCCeEEEEEcCC
Q 039428 250 SLSLGDGLALLSP-TKLVVAGNPYPSARLVESSD 282 (335)
Q Consensus 250 ~~~~pdGia~d~~-g~l~va~~~~~~~~v~~~~~ 282 (335)
.|..|.||++|++ |+|||++...++||.+....
T Consensus 442 ~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 442 RFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred hcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCC
Confidence 3677999999997 99999988768888887654
No 54
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.75 E-value=2.8e-15 Score=136.98 Aligned_cols=233 Identities=17% Similarity=0.213 Sum_probs=155.5
Q ss_pred cceeeeEEcCCCCEEEEEe-c------CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEec
Q 039428 49 FLCETAKWDDVGRRFLVSF-L------DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTD 121 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~-~------~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D 121 (335)
..|.+++++++|+.+|+.. . +++|+++|..+++ ++. .+... ..+.+++++++++.+|++..
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~----~~~---~~~~~----~~~~~~~~s~dg~~l~v~~~- 108 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE----VTQ---AIHND----LKPFGATINNTTQTLWFGNT- 108 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCC----EEE---EEEES----SCCCSEEEETTTTEEEEEET-
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCe----EEE---EEecC----CCcceEEECCCCCEEEEEec-
Confidence 4588999999998887773 3 5689999965444 122 22222 35789999985566998543
Q ss_pred CCCCccceEEEEECCCCeEEEEeecCCCcc----CCCCCCceeECCCCc-EEEEeC-CCCeEEEEccCCcEE-EEecCCc
Q 039428 122 VLGNKYSALAAYDLSTWKRLFLTQLSGKSE----EKSTADDIAVDAEGN-AYVTDV-VSSKIWKVGVEGQLL-SIIRSPL 194 (335)
Q Consensus 122 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~----~~~~p~~~~vd~~G~-lyV~d~-~~~~I~~~d~~g~~~-~~~~~~~ 194 (335)
.. +.|.+||+++++............ ....|++++++++|+ +|+++. ..+.|+++|.++... ..+.
T Consensus 109 -~~---~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~--- 181 (353)
T 3vgz_A 109 -VN---SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ--- 181 (353)
T ss_dssp -TT---TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC---
T ss_pred -CC---CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec---
Confidence 22 369999999988775554421100 022478899999986 999884 578899999875443 3221
Q ss_pred cccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEecCC
Q 039428 195 FTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGNPY 272 (335)
Q Consensus 195 ~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~~~ 272 (335)
. ....|++++++||| .||+++. +++|+++|+..++ ....+..........+.+++++++|+ +|+++...
T Consensus 182 --~-----~~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 252 (353)
T 3vgz_A 182 --N-----TGKMSTGLALDSEGKRLYTTNA-DGELITIDTADNK-ILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA 252 (353)
T ss_dssp --C-----CCTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTE-EEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS
T ss_pred --C-----CCCccceEEECCCCCEEEEEcC-CCeEEEEECCCCe-EEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC
Confidence 0 12348999999999 7888875 7899999998874 44455542211124577899999985 88887655
Q ss_pred CeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe--CCeEEEEec
Q 039428 273 PSARLVESSDGWETASVVAKFNGPTHRVATAATVK--DGRVYLSHL 316 (335)
Q Consensus 273 ~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~--~g~lyV~~~ 316 (335)
+.+.+++...+ +....+..+. |.++++. ++++|++..
T Consensus 253 ~~v~~~d~~~~----~~~~~~~~~~---~~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 253 AEVLVVDTRNG----NILAKVAAPE---SLAVLFNPARNEAYVTHR 291 (353)
T ss_dssp SEEEEEETTTC----CEEEEEECSS---CCCEEEETTTTEEEEEET
T ss_pred CEEEEEECCCC----cEEEEEEcCC---CceEEECCCCCEEEEEEC
Confidence 78888887654 2222332222 4567775 455888654
No 55
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.75 E-value=5.4e-15 Score=135.14 Aligned_cols=234 Identities=12% Similarity=0.072 Sum_probs=160.5
Q ss_pred ceeeeEEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcC------CCCcceEEEeCCCCeEEEEEecC
Q 039428 50 LCETAKWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVV------GNATMGIAVDRPRNRLLVAFTDV 122 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~------~~~p~Gi~~d~~~g~l~v~~~D~ 122 (335)
.|.+++++++|+.+|++ ..++.|+++|..+++ ++. .+..+... ...|.+++++++++.+|++....
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 162 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGE----VKG---RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK 162 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCC----EEE---EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCe----eEE---EEecCCCccccccCCCCCceEEECCCCCEEEEEecCC
Confidence 48899999999966666 667899999975554 122 22221100 01278899998667789864211
Q ss_pred CCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCCcE-EEEecCCccccccc
Q 039428 123 LGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEGQL-LSIIRSPLFTAKEW 200 (335)
Q Consensus 123 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g~~-~~~~~~~~~~~~~~ 200 (335)
+ ..|++||+++++....... . ...|++++++++|+ +|+++. .+.|+++|..... ...+....
T Consensus 163 --~--~~i~~~d~~~~~~~~~~~~--~---~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~------ 226 (353)
T 3vgz_A 163 --E--SVIWVVDGGNIKLKTAIQN--T---GKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLD------ 226 (353)
T ss_dssp --S--CEEEEEETTTTEEEEEECC--C---CTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCC------
T ss_pred --C--ceEEEEcCCCCceEEEecC--C---CCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCC------
Confidence 1 4699999999887755432 1 34588999999986 788765 7899999987543 33221100
Q ss_pred cccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEecCCCeEEEE
Q 039428 201 YKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGNPYPSARLV 278 (335)
Q Consensus 201 ~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~~~~~~~v~ 278 (335)
......+++++++||| .||+++...++|+++|+..++ ....+... .|.+++++++|+ +|+++...+.+.++
T Consensus 227 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~-~~~~~~~~------~~~~~~~s~dg~~l~v~~~~~~~v~~~ 299 (353)
T 3vgz_A 227 DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN-ILAKVAAP------ESLAVLFNPARNEAYVTHRQAGKVSVI 299 (353)
T ss_dssp SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC-EEEEEECS------SCCCEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc-EEEEEEcC------CCceEEECCCCCEEEEEECCCCeEEEE
Confidence 0012347889999999 799999999999999998764 45555532 267899999986 89997666889888
Q ss_pred EcCCCcEEEEEeeeecCCCCCcceEEEEe--CCeEEEEeccCC
Q 039428 279 ESSDGWETASVVAKFNGPTHRVATAATVK--DGRVYLSHLLGL 319 (335)
Q Consensus 279 ~~~~~~~~~~~~~~~~~p~~~~Pt~va~~--~g~lyV~~~~~~ 319 (335)
+...+ +....+.. ...|.++++. +..|||+...+.
T Consensus 300 d~~~~----~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~~ 336 (353)
T 3vgz_A 300 DAKSY----KVVKTFDT--PTHPNSLALSADGKTLYVSVKQKS 336 (353)
T ss_dssp ETTTT----EEEEEEEC--CSEEEEEEECTTSCEEEEEEECCC
T ss_pred ECCCC----eEEEEEec--CCCCCeEEEcCCCCEEEEEEcccc
Confidence 87654 23333332 2357899995 455999765544
No 56
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.74 E-value=8.6e-16 Score=136.63 Aligned_cols=204 Identities=16% Similarity=0.151 Sum_probs=139.4
Q ss_pred CCcceeeeEEcCCCCEEEEEe--cCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCC
Q 039428 47 PSFLCETAKWDDVGRRFLVSF--LDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLG 124 (335)
Q Consensus 47 ~~~~pegia~d~~g~~~~~~~--~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~ 124 (335)
...+|+|++++++|.+|+.+. ..++|.++|..+++ ++. .+..+.. ..+.|++++ +++||+++. ..
T Consensus 19 ~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~----v~~---~i~l~~~--~fgeGi~~~--g~~lyv~t~--~~ 85 (266)
T 2iwa_A 19 PYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGK----VEN---IHKMDDS--YFGEGLTLL--NEKLYQVVW--LK 85 (266)
T ss_dssp TTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCC----EEE---EEECCTT--CCEEEEEEE--TTEEEEEET--TC
T ss_pred CCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCC----EEE---EEecCCC--cceEEEEEe--CCEEEEEEe--cC
Confidence 345799999999875555543 35899999976665 233 2222221 145688887 579999643 22
Q ss_pred CccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCC-cEEEEeCCCCeEEEEccCCcE-EEEecCCccccccccc
Q 039428 125 NKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEG-NAYVTDVVSSKIWKVGVEGQL-LSIIRSPLFTAKEWYK 202 (335)
Q Consensus 125 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G-~lyV~d~~~~~I~~~d~~g~~-~~~~~~~~~~~~~~~~ 202 (335)
+.+.++|+++.+++..++.. .|.+..+.+|| ++|+++ ..++|+++|+++.. ...+....- + .
T Consensus 86 ---~~v~viD~~t~~v~~~i~~g-------~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~--~---~ 149 (266)
T 2iwa_A 86 ---NIGFIYDRRTLSNIKNFTHQ-------MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYN--G---H 149 (266)
T ss_dssp ---SEEEEEETTTTEEEEEEECC-------SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEET--T---E
T ss_pred ---CEEEEEECCCCcEEEEEECC-------CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCC--C---c
Confidence 46999999999887555442 12234444454 799999 68899999998643 332211100 0 0
Q ss_pred cccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCC---------cCCCCCCeEEEcCCC-cEEEEecCC
Q 039428 203 NVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGG---------SSLSLGDGLALLSPT-KLVVAGNPY 272 (335)
Q Consensus 203 ~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~---------~~~~~pdGia~d~~g-~l~va~~~~ 272 (335)
....+|++.+. +|.||++...++.|.+||+.+++ ....+++.+- .....|.||++++++ ++||++...
T Consensus 150 p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~-V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 150 RVIRLNELEYI-NGEVWANIWQTDCIARISAKDGT-LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp ECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCC-EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred ccccceeEEEE-CCEEEEecCCCCeEEEEECCCCc-EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence 12358999999 88999999999999999999875 6677775420 012357899999986 799997766
Q ss_pred CeEEEEEcC
Q 039428 273 PSARLVESS 281 (335)
Q Consensus 273 ~~~~v~~~~ 281 (335)
+.+.+++..
T Consensus 228 ~~v~~i~l~ 236 (266)
T 2iwa_A 228 PKLFEIKLH 236 (266)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 888887753
No 57
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.73 E-value=6.9e-16 Score=142.55 Aligned_cols=205 Identities=18% Similarity=0.090 Sum_probs=136.7
Q ss_pred cceeeeEEcCCCCEEEEEec-----CCeEEEEECCCCCCCcceeeeeEEeecCCc---CCCCcceEEEeCCCCeEEEEEe
Q 039428 49 FLCETAKWDDVGRRFLVSFL-----DGGVGQVLVPDEYSPGTVLEEVKLVKEDDV---VGNATMGIAVDRPRNRLLVAFT 120 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~-----~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~---~~~~p~Gi~~d~~~g~l~v~~~ 120 (335)
..|.++++|++|++|+++.. .++|+++|..+++ ++. .+..+.. ....+++|++|++++.+|++
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~----~~~---~~~~~~~~~~~~~~~~~v~vd~~~g~~yvt-- 137 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQ----LSR---VIYLPPPITLSNSFVNDLAVDLIHNFVYIS-- 137 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTE----EEE---EEECCTTTSCTTCCCCEEEEETTTTEEEEE--
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCe----EEE---EEECChhhcccccccceEEEecCCCEEEEE--
Confidence 47999999999999888854 5899999965454 122 2223211 12357999999767899995
Q ss_pred cCCCCccceEEEEECCCCeEEEEeec--C-CC--------ccC-------------CCCCCceeECCCC-cEEEEeCCCC
Q 039428 121 DVLGNKYSALAAYDLSTWKRLFLTQL--S-GK--------SEE-------------KSTADDIAVDAEG-NAYVTDVVSS 175 (335)
Q Consensus 121 D~~~~~~~~v~~~d~~~~~~~~~~~~--~-~~--------~~~-------------~~~p~~~~vd~~G-~lyV~d~~~~ 175 (335)
|......+.|.+||+++++....... . .+ +.. ...+++|+++++| .+|+++....
T Consensus 138 d~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~ 217 (343)
T 2qe8_A 138 DPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST 217 (343)
T ss_dssp ECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS
T ss_pred cCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC
Confidence 44211114699999988776543321 0 00 000 1357999999999 5999999989
Q ss_pred eEEEEccC----CcEEE--EecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCc
Q 039428 176 KIWKVGVE----GQLLS--IIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGS 249 (335)
Q Consensus 176 ~I~~~d~~----g~~~~--~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~ 249 (335)
+|++++.+ +.... .+ ..+.. .+....|+||++|++|+||+++..+++|.++++..+ ....+.... .
T Consensus 218 ~l~~~~~~~~~~~~~~~~~~~--~~~~~---~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G--~~~~~~~~~-~ 289 (343)
T 2qe8_A 218 SMYRIKSADLSNLQLTDAELG--SKIER---YSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADR--AYKLLVTDE-K 289 (343)
T ss_dssp EEEEEEHHHHTCTTCCHHHHH--TTCEE---EEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT--EEEEEEECG-G
T ss_pred eEEEEEHHHhcCCCCChhhhh--cceEe---cccCCCCceEEECCCCCEEEEccCCCeEEEEECCCC--CEEEEEECC-c
Confidence 99999853 11100 00 00000 011225999999999999999999999999999333 333332211 1
Q ss_pred CCCCCCeEEEcCCCcEEEEecC
Q 039428 250 SLSLGDGLALLSPTKLVVAGNP 271 (335)
Q Consensus 250 ~~~~pdGia~d~~g~l~va~~~ 271 (335)
+..|++++++++|+|||+++.
T Consensus 290 -~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 290 -LSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp -GSCEEEEEECTTSCEEEEECC
T ss_pred -eecCCeeEECCCCcEEEEeCc
Confidence 567999999999999999763
No 58
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.72 E-value=8.4e-15 Score=131.70 Aligned_cols=200 Identities=10% Similarity=0.024 Sum_probs=139.4
Q ss_pred CCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEee-cCCcCCCCcceEEEeCCCCeEEEEEecCC--
Q 039428 47 PSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVK-EDDVVGNATMGIAVDRPRNRLLVAFTDVL-- 123 (335)
Q Consensus 47 ~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~-~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~-- 123 (335)
....|.+++++++|++|+++...++|+++|+.+++ +.. +.. ......+.++++++|+ +|++|++.....
T Consensus 67 ~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~-----~~~--~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~ 138 (296)
T 3e5z_A 67 PSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE-----WES--IADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGID 138 (296)
T ss_dssp SCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC-----EEE--EECEETTEECCCCCCEEECT-TSCEEEEECSHHHH
T ss_pred CCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc-----EEE--EeeccCCCCCCCCCCEEECC-CCCEEEECCccccc
Confidence 34468999999999987776667899999864565 221 221 1222224688999997 899999532000
Q ss_pred ----------CCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccC--CcE---EE
Q 039428 124 ----------GNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVE--GQL---LS 188 (335)
Q Consensus 124 ----------~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~--g~~---~~ 188 (335)
......|+++|++ ++...... ....|++++++++|+++++++..++|++++.+ |+. ..
T Consensus 139 ~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~------~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~ 211 (296)
T 3e5z_A 139 KPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR------DRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGV 211 (296)
T ss_dssp CGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC------CCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEE
T ss_pred cccccccccccCCCcEEEEECCC-CCEEEeec------CCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCe
Confidence 0011469999987 55442211 15678999999999877999999999999974 544 22
Q ss_pred EecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEc-CCC-cEE
Q 039428 189 IIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALL-SPT-KLV 266 (335)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d-~~g-~l~ 266 (335)
.+ .. ....|+||+++++|+||++. ++.|.++++++. ....+.... . |..+++. +++ .||
T Consensus 212 ~~-~~---------~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~--~~~~~~~~~----~-~~~~~f~~~d~~~L~ 272 (296)
T 3e5z_A 212 HF-TV---------EPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGD--ELGRVLTPQ----T-TSNLCFGGPEGRTLY 272 (296)
T ss_dssp EE-CC---------SSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSC--EEEEEECSS----C-CCEEEEESTTSCEEE
T ss_pred Ee-eC---------CCCCCCeEEECCCCCEEEEc--CCeEEEECCCCC--EEEEEECCC----C-ceeEEEECCCCCEEE
Confidence 22 11 12358999999999999999 789999999865 566665432 3 8899995 565 699
Q ss_pred EEecCCCeEEEEEcCC
Q 039428 267 VAGNPYPSARLVESSD 282 (335)
Q Consensus 267 va~~~~~~~~v~~~~~ 282 (335)
++.. ++++.++...
T Consensus 273 v~t~--~~l~~~~~~~ 286 (296)
T 3e5z_A 273 MTVS--TEFWSIETNV 286 (296)
T ss_dssp EEET--TEEEEEECSC
T ss_pred EEcC--CeEEEEEccc
Confidence 9977 6677676543
No 59
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.71 E-value=8.4e-15 Score=135.10 Aligned_cols=261 Identities=13% Similarity=0.074 Sum_probs=159.6
Q ss_pred CCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcC---CCCcceEEEeCC---CCeEEEEE
Q 039428 46 SPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVV---GNATMGIAVDRP---RNRLLVAF 119 (335)
Q Consensus 46 ~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~---~~~p~Gi~~d~~---~g~l~v~~ 119 (335)
..-..|+++++.++|++|++....++|+++++.++. ... +...+... ...+.||+++|+ ++.||++.
T Consensus 29 ~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~-----~~~--v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 29 TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR-----KTE--LGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYF 101 (347)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC-----EEE--EEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCc-----Eee--ecccCceeecCCCCceeeEeccccccCCEEEEEE
Confidence 334579999999999977766658999999753343 121 22222211 246899999973 68999964
Q ss_pred ecCCCCccceEEEEECCCC-----e----EEEEeecCCCccCCCCCCceeECCCCcEEEEe-------------CCCCeE
Q 039428 120 TDVLGNKYSALAAYDLSTW-----K----RLFLTQLSGKSEEKSTADDIAVDAEGNAYVTD-------------VVSSKI 177 (335)
Q Consensus 120 ~D~~~~~~~~v~~~d~~~~-----~----~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d-------------~~~~~I 177 (335)
+.... ++|.++..+.+ . ......++. ...+....|++++||+|||+. ...++|
T Consensus 102 t~~~~---~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~--~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~I 176 (347)
T 3das_A 102 TSASD---NRIVRMLYDEKKPSGEQLGAPDTVFRGIPK--GVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKI 176 (347)
T ss_dssp ECSSS---EEEEEEEBCTTSCTTCCBCCCEEEEEEECC--CSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCE
T ss_pred ecCCC---CEEEEEEeCCCCcccccCCCcEEEEEcCCC--CCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEE
Confidence 32221 57999987652 1 111222322 225678889999999999984 236899
Q ss_pred EEEccCCcEEEEecCCccccc-cccccccccCeEEEccCCeEEEEECCC---CEEEEEeCCCCc------ee------EE
Q 039428 178 WKVGVEGQLLSIIRSPLFTAK-EWYKNVFGLNGIVYHPDGFLIVIHMCS---GNLFKIDIRKEE------EE------VK 241 (335)
Q Consensus 178 ~~~d~~g~~~~~~~~~~~~~~-~~~~~~~~p~Gia~~~dg~Lyvad~~~---~~v~~~d~~~~~------~~------~~ 241 (335)
+|++++|+... +++ |... -....+.+|.||+++|+|.||+++.+. ..|.++.....- +. ..
T Consensus 177 lRi~~dG~ip~--~nP-f~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~ 253 (347)
T 3das_A 177 LRMTPDGEPAP--GNP-FPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHD 253 (347)
T ss_dssp EEECTTSSBCT--TCS-STTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCC
T ss_pred EEEeCCCCccC--CCC-CCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccC
Confidence 99999987321 111 1110 112245679999999999999999875 467776543320 00 00
Q ss_pred -EEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe-CCeEEEEec--c
Q 039428 242 -LIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATVK-DGRVYLSHL--L 317 (335)
Q Consensus 242 -~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~-~g~lyV~~~--~ 317 (335)
.+..... ...|.||++. +|.+|++.....+++.+....+....+...-+.+ ....|..|++. +|.|||++. .
T Consensus 254 P~~~~~~~--~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~-~~gR~~dv~~~pDG~lyv~td~~~ 329 (347)
T 3das_A 254 PVAQWSTD--EASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEG-EYGRLRTVAPAGGDKLWLVTSNTD 329 (347)
T ss_dssp CSEEECTT--TCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTT-TSSCEEEEEEEETTEEEEEECTTS
T ss_pred CcEecCCC--CCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecC-CCCCccEEEECCCCcEEEEEcCCC
Confidence 0011000 1247899998 5899999765566776666544211111111222 23457889986 999999644 4
Q ss_pred CCCCCccc
Q 039428 318 GLGFPNTK 325 (335)
Q Consensus 318 ~~~~~~~~ 325 (335)
|+|.|...
T Consensus 330 g~g~p~~~ 337 (347)
T 3das_A 330 GRGDAKGG 337 (347)
T ss_dssp SSSCCCTT
T ss_pred CCCCCCCC
Confidence 56777443
No 60
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.71 E-value=1.5e-15 Score=138.13 Aligned_cols=223 Identities=13% Similarity=0.100 Sum_probs=146.8
Q ss_pred HhhhhhhhhhhhhhhhcCCCceeEEE-c---------CCCcceeeeEEcCCCCEEEEEecC--CeEEEEECCCCCCCcce
Q 039428 19 AIPIAYIISIELAIAMAKPATHVYQY-H---------SPSFLCETAKWDDVGRRFLVSFLD--GGVGQVLVPDEYSPGTV 86 (335)
Q Consensus 19 ~~p~~~~~~~~~~~~~~d~~~~~~~~-~---------~~~~~pegia~d~~g~~~~~~~~~--~~I~~~d~~~g~~~~~v 86 (335)
..|.+++++.++.++|+|...+++.. . .....|.+++++++|++|+++... .+|++++..+++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~----- 106 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT----- 106 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC-----
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe-----
Confidence 35667777777777887755444332 1 122368999999999987776433 369999865565
Q ss_pred eeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEE-EEee--cC--CCccCCCCCCceeE
Q 039428 87 LEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRL-FLTQ--LS--GKSEEKSTADDIAV 161 (335)
Q Consensus 87 ~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~-~~~~--~~--~~~~~~~~p~~~~v 161 (335)
+. .+...+. ...+.|+++.+ ++++|+ .|... +.|+++|+.+++.. +... +. .+...+..||++
T Consensus 107 ~~--~~~~~~~--~~~~~g~~~~~-~~~~~v--~d~~~---g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-- 174 (306)
T 2p4o_A 107 VE--TLLTLPD--AIFLNGITPLS-DTQYLT--ADSYR---GAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-- 174 (306)
T ss_dssp EE--EEEECTT--CSCEEEEEESS-SSEEEE--EETTT---TEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--
T ss_pred EE--EEEeCCC--ccccCcccccC-CCcEEE--EECCC---CeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--
Confidence 22 1333333 23678998875 788999 45432 46999999876422 1111 10 111236789998
Q ss_pred CCCC-cEEEEeCCCCeEEEEccCC--cEEEEecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCce
Q 039428 162 DAEG-NAYVTDVVSSKIWKVGVEG--QLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEE 238 (335)
Q Consensus 162 d~~G-~lyV~d~~~~~I~~~d~~g--~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~ 238 (335)
+++| ++||+|+.+++|++++.++ +... ...+. ....|.||+++++|+|||++..+++|.+|++++.
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~---~~~~~------~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G~-- 243 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDSTDKPGE---PEIFV------EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRS-- 243 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTTSCBCC---CEEEE------ESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCC--
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCCCCCCc---cEEEe------ccCCCCCeEECCCCCEEEEeCCCCeEEEECCCCC--
Confidence 6665 6999999999999999874 2100 00011 1245999999999999999999999999999754
Q ss_pred eEEEEeccCCcCCCCCCeEEEc---CC-CcEEEEecC
Q 039428 239 EVKLIELRGGSSLSLGDGLALL---SP-TKLVVAGNP 271 (335)
Q Consensus 239 ~~~~~~~~g~~~~~~pdGia~d---~~-g~l~va~~~ 271 (335)
......... .+..|.+++++ ++ +.|||++.+
T Consensus 244 ~~~~~~~~~--~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 244 TTIIAQAEQ--GVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEEEECGGG--TCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EEEEeeccc--ccCCceEEEEecccCCCCEEEEECCC
Confidence 322222221 14569999998 67 579999763
No 61
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.71 E-value=6.3e-15 Score=135.19 Aligned_cols=249 Identities=14% Similarity=0.150 Sum_probs=151.5
Q ss_pred CCcceeeeEEcCCCCEEEEEec--CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCC
Q 039428 47 PSFLCETAKWDDVGRRFLVSFL--DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLG 124 (335)
Q Consensus 47 ~~~~pegia~d~~g~~~~~~~~--~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~ 124 (335)
....|.+++++|+|++|+++.. ++.|+.|+..++. ... +..... .+..|.++++++++..||+++.+ .
T Consensus 38 ~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~-----~~~--~~~~~~-~~~~p~~~a~spdg~~l~~~~~~--~ 107 (347)
T 3hfq_A 38 ATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQT-----AHK--LNTVVA-PGTPPAYVAVDEARQLVYSANYH--K 107 (347)
T ss_dssp ECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTE-----EEE--EEEEEE-ESCCCSEEEEETTTTEEEEEETT--T
T ss_pred ccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCc-----EEE--eeeeec-CCCCCEEEEECCCCCEEEEEeCC--C
Confidence 3456899999999995555543 5789998854333 111 111111 12478899999855568885321 1
Q ss_pred CccceEEEEECC-CCeEE--EEeecCCCc----cCCCCCCceeECCCCcEEEEeCCCCeEEEEccC--CcEEEEecCCcc
Q 039428 125 NKYSALAAYDLS-TWKRL--FLTQLSGKS----EEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVE--GQLLSIIRSPLF 195 (335)
Q Consensus 125 ~~~~~v~~~d~~-~~~~~--~~~~~~~~~----~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~--g~~~~~~~~~~~ 195 (335)
+.|.+||.+ ++... ......+.+ +....++.++++|+|++|+++...+.|++++.+ |+..... .+
T Consensus 108 ---~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~---~~ 181 (347)
T 3hfq_A 108 ---GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQS---VL 181 (347)
T ss_dssp ---TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEE---EE
T ss_pred ---CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEee---eE
Confidence 358888874 33333 222211111 113457789999999999999999999888875 4433211 01
Q ss_pred ccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEE---EeccCC--cCCCCCCeEEEcCCCc-EEEE
Q 039428 196 TAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKL---IELRGG--SSLSLGDGLALLSPTK-LVVA 268 (335)
Q Consensus 196 ~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~---~~~~g~--~~~~~pdGia~d~~g~-l~va 268 (335)
.. ....+|++++++||| +||+++..+++|..++.+...+.... +..... .....|.+++++++|+ ||++
T Consensus 182 ~~----~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~ 257 (347)
T 3hfq_A 182 TM----EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVS 257 (347)
T ss_dssp EC----CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEE
T ss_pred Ec----CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEE
Confidence 11 122358899999999 69999999999888877642113222 221110 0013477899999996 8888
Q ss_pred ecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe-C-CeEEEEecc
Q 039428 269 GNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATVK-D-GRVYLSHLL 317 (335)
Q Consensus 269 ~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~-~-g~lyV~~~~ 317 (335)
+...+.+.+++.+.+.. .+....+... ...|.++++. + ..||++...
T Consensus 258 ~~~~~~v~v~~~~~~g~-~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 258 NRGYNTLAVFAVTADGH-LTLIQQISTE-GDFPRDFDLDPTEAFVVVVNQN 306 (347)
T ss_dssp EETTTEEEEEEECGGGC-EEEEEEEECS-SSCCCEEEECTTSSEEEEEETT
T ss_pred eCCCCEEEEEEECCCCc-EEEeEEEecC-CCCcCeEEECCCCCEEEEEEcC
Confidence 76567888888753321 1233333221 3457889995 4 458886543
No 62
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.70 E-value=1.4e-16 Score=160.78 Aligned_cols=211 Identities=14% Similarity=0.183 Sum_probs=144.3
Q ss_pred CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCC----CeEEEEe
Q 039428 69 DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLST----WKRLFLT 144 (335)
Q Consensus 69 ~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~----~~~~~~~ 144 (335)
.+.|.+++.. +.. +. .++ +. ...|.||++++.+++||+ +|...+ .|+++++++ ......
T Consensus 385 ~~~I~~id~~-~~~----~~--~~~--~~--~~~p~gla~d~~~~~Ly~--sD~~~~---~I~~~~~~g~~~~~~~~~~- 447 (699)
T 1n7d_A 385 RHEVRKMTLD-RSE----YT--SLI--PN--LRNVVALDTEVASNRIYW--SDLSQR---MICSTQLDRAHGVSSYDTV- 447 (699)
T ss_dssp TTC-CEECTT-SCC----EE--CCS--CC--CTTCCCCEEETTTTEEEE--CCTTTT---SBEEEESCCCCC-CCCCCB-
T ss_pred ccceEEEeCC-CCc----ce--eee--cc--CcceEEEccccccCeEEE--EecCCC---eEEEEecCCCCCCcceEEE-
Confidence 4688999753 431 11 121 22 247899999987899999 676544 499999876 211111
Q ss_pred ecCCCccCCCCCCceeECC-CCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccC-CeEEEEE
Q 039428 145 QLSGKSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPD-GFLIVIH 222 (335)
Q Consensus 145 ~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~d-g~Lyvad 222 (335)
+ ..++..|.+|++|. .|+||++|...++|++++++|+..+.+... .+..|+||+++|+ |+||+++
T Consensus 448 -i---~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~---------~~~~P~giavDp~~g~ly~td 514 (699)
T 1n7d_A 448 -I---SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE---------QGSKPRAIVVDPVHGFMYWTD 514 (699)
T ss_dssp -C---CSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCC---------SSCCCCCEECCSSSSCCEECC
T ss_pred -E---eCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeC---------CCCCcceEEEccCCCcEEEcc
Confidence 1 11256799999995 578999999999999999998765543221 2345999999995 5999999
Q ss_pred CCC-CEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCC-CcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCc
Q 039428 223 MCS-GNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSP-TKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRV 300 (335)
Q Consensus 223 ~~~-~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~-g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~ 300 (335)
... ++|+++++++. ..+.+... .+..|.||++|++ ++||+++...+.|.+++.+... ...+... ......
T Consensus 515 ~~~~~~I~~~~~dG~--~~~~l~~~---~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~--~~~~~~ 586 (699)
T 1n7d_A 515 WGTPAKIKKGGLNGV--DIYSLVTE---NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILED--EKRLAH 586 (699)
T ss_dssp CSSSCCEEBCCSSSC--CCCEESCS---SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCC--SSSCSS
T ss_pred cCCCCeEEEEeCCCC--CeeEEEeC---CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEec--CCcCCC
Confidence 876 89999999876 33333211 2567999999976 6899998876788888764321 1122211 123456
Q ss_pred ceEEEEeCCeEEEEecc
Q 039428 301 ATAATVKDGRVYLSHLL 317 (335)
Q Consensus 301 Pt~va~~~g~lyV~~~~ 317 (335)
|.++++++++||++++.
T Consensus 587 P~glavd~~~lywtd~~ 603 (699)
T 1n7d_A 587 PFSLAVFEDKVFWTDII 603 (699)
T ss_dssp CCCCEEETTEEEEECST
T ss_pred ceEeEEECCEEEEEeCC
Confidence 88999998899998754
No 63
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.69 E-value=3.8e-15 Score=134.64 Aligned_cols=193 Identities=11% Similarity=0.049 Sum_probs=132.2
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeec-CCcCCCCcceEEEeCCCCeEEEEEecCCC---
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKE-DDVVGNATMGIAVDRPRNRLLVAFTDVLG--- 124 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~-~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~--- 124 (335)
..|.+++++++|++|+.. .+.|+++|..+++ ++ .+... .....+.++++++|+ +|++|+++.....
T Consensus 54 ~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~-----~~--~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~ 123 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI--GTKFCALNWKEQS-----AV--VLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPA 123 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE--TTEEEEEETTTTE-----EE--EEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTT
T ss_pred CceEEEEECCCCCEEEEE--CCeEEEEECCCCc-----EE--EEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccc
Confidence 358899999999965544 6799999965444 22 12221 111224689999997 8999996532210
Q ss_pred ---CccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEcc---CCcEE--EEecCCcc
Q 039428 125 ---NKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGV---EGQLL--SIIRSPLF 195 (335)
Q Consensus 125 ---~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~---~g~~~--~~~~~~~~ 195 (335)
.....|+++|+++. ...... ....||+++++++|+ +|++++..++|++++. +|... +.+. .+
T Consensus 124 ~~~~~~~~l~~~d~~g~-~~~~~~------~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~--~~ 194 (297)
T 3g4e_A 124 VLERHQGALYSLFPDHH-VKKYFD------QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVY--KL 194 (297)
T ss_dssp BCCTTCEEEEEECTTSC-EEEEEE------EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEE--EC
T ss_pred cccCCCcEEEEEECCCC-EEEEee------ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEE--EC
Confidence 11257999998643 332211 146789999999985 9999999999999975 34332 1111 01
Q ss_pred ccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEc-CCC-cEEEEec
Q 039428 196 TAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALL-SPT-KLVVAGN 270 (335)
Q Consensus 196 ~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d-~~g-~l~va~~ 270 (335)
.. ....|.||++|++|+||+++..+++|+++++++++ ....+..+. ..|..+++. +++ .|||+..
T Consensus 195 ~~-----~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~-~~~~i~~p~----~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 195 EK-----EEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK-RLQTVKLPV----DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CG-----GGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC-EEEEEECSS----SBEEEEEEESGGGCEEEEEEB
T ss_pred CC-----CCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce-EEEEEECCC----CCceEEEEeCCCCCEEEEEcC
Confidence 10 12358999999999999999999999999998543 566676543 348899997 564 7999966
No 64
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.69 E-value=6.8e-14 Score=127.01 Aligned_cols=221 Identities=14% Similarity=0.128 Sum_probs=145.4
Q ss_pred hhhhhcCCCceeE--EEcCCCcceeeeEEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcce-
Q 039428 30 LAIAMAKPATHVY--QYHSPSFLCETAKWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMG- 105 (335)
Q Consensus 30 ~~~~~~d~~~~~~--~~~~~~~~pegia~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~G- 105 (335)
..+.+.|..+..+ .+......| +++++++|+.+|+. ..+++|+++|..+++ +.. ..+... ..+..
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~----~~~--~~~~~~----~~~~~~ 88 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP----PKV--VAIQEG----QSSMAD 88 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS----CEE--EEEEEC----SSCCCC
T ss_pred CeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc----eeE--EecccC----CCCccc
Confidence 3455555544332 223333446 99999999966666 557899999965444 101 122221 24556
Q ss_pred EEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCe-EEEEc--
Q 039428 106 IAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSK-IWKVG-- 181 (335)
Q Consensus 106 i~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~-I~~~d-- 181 (335)
+++++++..+|+ .+..++. ..|.+||.++++....... ...|++++++|+|+ +|+++...+. |++++
T Consensus 89 ~~~s~dg~~l~~--~~~~~~~-~~i~v~d~~~~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 89 VDITPDDQFAVT--VTGLNHP-FNMQSYSFLKNKFISTIPI------PYDAVGIAISPNGNGLILIDRSSANTVRRFKID 159 (331)
T ss_dssp EEECTTSSEEEE--CCCSSSS-CEEEEEETTTTEEEEEEEC------CTTEEEEEECTTSSCEEEEEETTTTEEEEEEEC
T ss_pred eEECCCCCEEEE--ecCCCCc-ccEEEEECCCCCeEEEEEC------CCCccceEECCCCCEEEEEecCCCceEEEEEEC
Confidence 999985555664 3322111 2699999999887644332 34678999999996 9999887666 55544
Q ss_pred cCCcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCcee---EEEEeccCCcCCCCCCeE
Q 039428 182 VEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEE---VKLIELRGGSSLSLGDGL 257 (335)
Q Consensus 182 ~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~---~~~~~~~g~~~~~~pdGi 257 (335)
.+|.....- ...+ .....|.+++++||| +||+++..+++|.++|+..++ . ...+.. + ..|.++
T Consensus 160 ~~g~~~~~~-~~~~------~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~-~~~~~~~~~~-~----~~~~~~ 226 (331)
T 3u4y_A 160 ADGVLFDTG-QEFI------SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPE-NITLLNAVGT-N----NLPGTI 226 (331)
T ss_dssp TTCCEEEEE-EEEE------CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTT-SCEEEEEEEC-S----SCCCCE
T ss_pred CCCcEeecC-Cccc------cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCc-ccceeeeccC-C----CCCceE
Confidence 445442210 0001 123458999999999 699999999999999998764 4 445542 2 358999
Q ss_pred EEcCCCc-EEEEecCCCeEEEEEcCCC
Q 039428 258 ALLSPTK-LVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 258 a~d~~g~-l~va~~~~~~~~v~~~~~~ 283 (335)
+++++|+ +|+++.+.+.+.+++...+
T Consensus 227 ~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 227 VVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp EECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred EECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 9999997 8888665567888887655
No 65
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.66 E-value=9e-15 Score=130.04 Aligned_cols=191 Identities=12% Similarity=0.058 Sum_probs=135.6
Q ss_pred CcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEc
Q 039428 102 ATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVG 181 (335)
Q Consensus 102 ~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d 181 (335)
.++||++++ +++||+++..... +.|.++|+++++++....+.. ..++.+++++ .+++|++++..+.++++|
T Consensus 22 f~~Gl~~~~-dg~Lyvstg~~~~---s~v~~iD~~tg~v~~~i~l~~----~~fgeGi~~~-g~~lyv~t~~~~~v~viD 92 (266)
T 2iwa_A 22 FTQGLVYAE-NDTLFESTGLYGR---SSVRQVALQTGKVENIHKMDD----SYFGEGLTLL-NEKLYQVVWLKNIGFIYD 92 (266)
T ss_dssp CEEEEEECS-TTEEEEEECSTTT---CEEEEEETTTCCEEEEEECCT----TCCEEEEEEE-TTEEEEEETTCSEEEEEE
T ss_pred CcccEEEeC-CCeEEEECCCCCC---CEEEEEECCCCCEEEEEecCC----CcceEEEEEe-CCEEEEEEecCCEEEEEE
Confidence 478999996 5899997543222 569999999999886666521 3455578876 358999999999999999
Q ss_pred cCCc-EEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccC-CcCCCCCCeEE
Q 039428 182 VEGQ-LLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRG-GSSLSLGDGLA 258 (335)
Q Consensus 182 ~~g~-~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g-~~~~~~pdGia 258 (335)
++.. .+..+ .. . .+.|..+++|| +||+++ ++++|+.+|+.+.+ ....+.+.. ...+..|.+++
T Consensus 93 ~~t~~v~~~i-----~~------g-~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~-v~~~I~Vg~~~~p~~~~nele 158 (266)
T 2iwa_A 93 RRTLSNIKNF-----TH------Q-MKDGWGLATDGKILYGSD-GTSILYEIDPHTFK-LIKKHNVKYNGHRVIRLNELE 158 (266)
T ss_dssp TTTTEEEEEE-----EC------C-SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEE
T ss_pred CCCCcEEEEE-----EC------C-CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCc-EEEEEEECCCCcccccceeEE
Confidence 8754 33322 11 1 25677777787 999999 68999999999875 566666432 12345688999
Q ss_pred EcCCCcEEEEecCCCeEEEEEcCCCcEEEEEee-eec-------CCCCCcceEEEEe--CCeEEEEec
Q 039428 259 LLSPTKLVVAGNPYPSARLVESSDGWETASVVA-KFN-------GPTHRVATAATVK--DGRVYLSHL 316 (335)
Q Consensus 259 ~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~-~~~-------~p~~~~Pt~va~~--~g~lyV~~~ 316 (335)
+. +|.+|++++.++.+.+++...+-....+.- .+. .+....|.+++++ ++++||+..
T Consensus 159 ~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk 225 (266)
T 2iwa_A 159 YI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK 225 (266)
T ss_dssp EE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET
T ss_pred EE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC
Confidence 88 789999987778999999876633333321 110 1223567899996 678999764
No 66
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.65 E-value=2.7e-14 Score=132.67 Aligned_cols=253 Identities=13% Similarity=0.123 Sum_probs=152.3
Q ss_pred CcceeeeEEcCCCC-EEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCc--C-CCCcceEEEeCC---CCeEEEEEe
Q 039428 48 SFLCETAKWDDVGR-RFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDV--V-GNATMGIAVDRP---RNRLLVAFT 120 (335)
Q Consensus 48 ~~~pegia~d~~g~-~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~--~-~~~p~Gi~~d~~---~g~l~v~~~ 120 (335)
-..|.+++++++|+ +|++.. .++|++++. ++.. .+ .+...+.. . ...+.||+++|+ ++.||++..
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~-~G~i~~~~~-~g~~-----~~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~ 88 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLR-GGELRHWQA-GKGL-----SA-PLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYS 88 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEET-TTEEEEEET-TTEE-----CC-CCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CCCcEEEEEcCCCCEEEEEeC-CceEEEEeC-CCce-----ee-EecCCcccccCCCCCceeEEECCCCCCCCEEEEEEe
Confidence 34799999999999 766654 689999984 4541 10 11111111 1 135789999985 799999753
Q ss_pred cCC--CCccceEEEEECCCC--eE---EEE-eecCCCccCCCCCCceeECCCCcEEEEeCC-------------CCeEEE
Q 039428 121 DVL--GNKYSALAAYDLSTW--KR---LFL-TQLSGKSEEKSTADDIAVDAEGNAYVTDVV-------------SSKIWK 179 (335)
Q Consensus 121 D~~--~~~~~~v~~~d~~~~--~~---~~~-~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~-------------~~~I~~ 179 (335)
... +...++|.+++.+.+ .+ ... ..++......+.++++++++||+|||+... .++|+|
T Consensus 89 ~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~r 168 (353)
T 2g8s_A 89 EVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVR 168 (353)
T ss_dssp EECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEE
T ss_pred CCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEE
Confidence 211 100257999887643 22 111 122211122567899999999999999532 468999
Q ss_pred EccCCcEEEEecCCccc-----ccc-ccccccccCeEEEcc-CCeEEEEECCC---CEEEEEeCCCCce--e--------
Q 039428 180 VGVEGQLLSIIRSPLFT-----AKE-WYKNVFGLNGIVYHP-DGFLIVIHMCS---GNLFKIDIRKEEE--E-------- 239 (335)
Q Consensus 180 ~d~~g~~~~~~~~~~~~-----~~~-~~~~~~~p~Gia~~~-dg~Lyvad~~~---~~v~~~d~~~~~~--~-------- 239 (335)
++++|+... +++ |. .++ ....+.+|.||++++ +|+||++|... .+|.++...+.-+ .
T Consensus 169 i~~dG~~p~--~np-f~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~ 245 (353)
T 2g8s_A 169 LTDQGEIPD--DNP-FIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYS 245 (353)
T ss_dssp EETTSCCCT--TCT-TTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTT
T ss_pred ECCCCCCCC--CCC-CcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCC
Confidence 999986321 111 11 000 112345799999999 78999999874 3666665432100 0
Q ss_pred ---------------EE-EEeccCCcCCCCCCeEEEcC-------CCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCC
Q 039428 240 ---------------VK-LIELRGGSSLSLGDGLALLS-------PTKLVVAGNPYPSARLVESSDGWETASVVAKFNGP 296 (335)
Q Consensus 240 ---------------~~-~~~~~g~~~~~~pdGia~d~-------~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p 296 (335)
.. .+.... ...|.|+++.. +|.+||++...+.++.+...++... .. ..+-..
T Consensus 246 ~~~~~~~~~~~~~~~~~P~~~~~~---~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~-~~-~~~~~~ 320 (353)
T 2g8s_A 246 GFKIPEAKGEIVAGTEQPVFYWKD---SPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVT-ED-GRILTD 320 (353)
T ss_dssp SSCCTTCCBSSCTTSCCCSEEESS---CCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEE-EE-EEESGG
T ss_pred CCccCcccCCCCCCccCCeEEeCC---CcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEe-ee-EEcccC
Confidence 00 000000 12588999974 5899999886678888777654111 11 112112
Q ss_pred CCCcceEEEEe-CCeEEEEec
Q 039428 297 THRVATAATVK-DGRVYLSHL 316 (335)
Q Consensus 297 ~~~~Pt~va~~-~g~lyV~~~ 316 (335)
....|.+++++ +|+|||++.
T Consensus 321 ~~~rp~~v~~~pdG~lyv~td 341 (353)
T 2g8s_A 321 RGQRIRDVRTGPDGYLYVLTD 341 (353)
T ss_dssp GCCCEEEEEECTTSCEEEEEC
T ss_pred CCCceeEEEECCCCcEEEEEe
Confidence 23458899997 899999653
No 67
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.65 E-value=2e-13 Score=125.09 Aligned_cols=215 Identities=17% Similarity=0.184 Sum_probs=135.9
Q ss_pred CcceeeeEEcCCCCEEEEE-ecCCeEEEEECC-CCCCCcceeeeeEEeecCCc------CCCCcceEEEeCCCCeEEEEE
Q 039428 48 SFLCETAKWDDVGRRFLVS-FLDGGVGQVLVP-DEYSPGTVLEEVKLVKEDDV------VGNATMGIAVDRPRNRLLVAF 119 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~-~~~~~I~~~d~~-~g~~~~~v~~~~~~~~~~~~------~~~~p~Gi~~d~~~g~l~v~~ 119 (335)
...|.+++++++|+.+|++ ..+++|..|+.. ++. ......+...+. ....+++++++| +|++|++
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~-----~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~- 157 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA-----LTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVI- 157 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSC-----EEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEE-
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC-----eeecceeecCCCCCCccccCCCceEEEECC-CCcEEEE-
Confidence 4468899999999977777 467888888752 233 111111111110 112467899998 5668884
Q ss_pred ecCCCCccceEEEEECC-CCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccC---CcEEEEecCCc
Q 039428 120 TDVLGNKYSALAAYDLS-TWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVE---GQLLSIIRSPL 194 (335)
Q Consensus 120 ~D~~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~---g~~~~~~~~~~ 194 (335)
+... ..|.+||.+ ++++......... ....|++++++|||+ +|+++...+.|.+++.+ |+... +.. .
T Consensus 158 -~~~~---~~v~~~~~~~~g~~~~~~~~~~~--~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~-~~~-~ 229 (347)
T 3hfq_A 158 -DLGS---DKVYVYNVSDAGQLSEQSVLTME--AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQ-LGI-V 229 (347)
T ss_dssp -ETTT---TEEEEEEECTTSCEEEEEEEECC--TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEE-EEE-E
T ss_pred -eCCC---CEEEEEEECCCCcEEEeeeEEcC--CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEE-eee-e
Confidence 3332 358889887 5654422222111 135788999999997 99999888888877755 33321 110 0
Q ss_pred cccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCc--eeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEec
Q 039428 195 FTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEE--EEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGN 270 (335)
Q Consensus 195 ~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~--~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~ 270 (335)
...+........+.+++++||| +||+++..+++|..++++..+ .....+...+ ..|.+++++++|+ ||+++.
T Consensus 230 ~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~----~~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 230 KTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEG----DFPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp ESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSS----SCCCEEEECTTSSEEEEEET
T ss_pred eecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCC----CCcCeEEECCCCCEEEEEEc
Confidence 0001001112458899999999 799999999999999886331 1222333222 3589999999996 888877
Q ss_pred CCCeEEEEEcC
Q 039428 271 PYPSARLVESS 281 (335)
Q Consensus 271 ~~~~~~v~~~~ 281 (335)
.++.+.+++.+
T Consensus 306 ~~~~v~v~~~d 316 (347)
T 3hfq_A 306 NTDNATLYARD 316 (347)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCcEEEEEEe
Confidence 66778887654
No 68
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.65 E-value=6.3e-14 Score=127.76 Aligned_cols=203 Identities=14% Similarity=0.186 Sum_probs=136.1
Q ss_pred CcceeeeEEcCCCCEEEEEecC----CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecC-
Q 039428 48 SFLCETAKWDDVGRRFLVSFLD----GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDV- 122 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~~----~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~- 122 (335)
...|.+++++++|++|+++..+ +.|+++|..++. +. .++.... .+..++++++|+ +|++|++....
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~-----~~--~~~~~~~-~~~~~~~i~~d~-~g~l~v~~~~~~ 156 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN-----LQ--DIIEDLS-TAYCIDDMVFDS-KGGFYFTDFRGY 156 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS-----CE--EEECSSS-SCCCEEEEEECT-TSCEEEEECCCB
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE-----EE--EEEccCc-cCCcccceEECC-CCCEEEEecccc
Confidence 3468999999999988877544 689999854333 12 1222111 234689999997 78999964321
Q ss_pred CCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEcc--CCcEEEEecCCcccccc
Q 039428 123 LGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGV--EGQLLSIIRSPLFTAKE 199 (335)
Q Consensus 123 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~--~g~~~~~~~~~~~~~~~ 199 (335)
.......|+++|+++++...... ....|++++++++|+ +|+++...++|++++. +|+....+....+..
T Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~-- 228 (333)
T 2dg1_A 157 STNPLGGVYYVSPDFRTVTPIIQ------NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYY-- 228 (333)
T ss_dssp TTBCCEEEEEECTTSCCEEEEEE------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEE--
T ss_pred ccCCCceEEEEeCCCCEEEEeec------CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEe--
Confidence 00111469999998766543221 135688999999996 9999988899999998 444332111000100
Q ss_pred ccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCC--cCCCCCCeEEEcCCC-cEEEEec
Q 039428 200 WYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGG--SSLSLGDGLALLSPT-KLVVAGN 270 (335)
Q Consensus 200 ~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~--~~~~~pdGia~d~~g-~l~va~~ 270 (335)
......|++|+++++|++|+++..+++|+++++++. ....+..... ..+..|.+++++++| .||++..
T Consensus 229 -~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~--~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 229 -FTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGY--PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp -CCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSC--EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred -cCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCC--EEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 001135899999999999999988899999999755 5566654321 012258999999886 7999855
No 69
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.65 E-value=5.3e-14 Score=127.45 Aligned_cols=197 Identities=12% Similarity=0.064 Sum_probs=135.8
Q ss_pred CcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEee-cCCcCCCCcceEEEeCCCCeEEEEEecCC--C
Q 039428 48 SFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVK-EDDVVGNATMGIAVDRPRNRLLVAFTDVL--G 124 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~-~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~--~ 124 (335)
...|.+++++++|++|+++...++|++++. +++ +.. +.. ..+...+.|+.+++++ +|++|++ |.. .
T Consensus 85 ~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~-~g~-----~~~--~~~~~~~~~~~~~~~i~~d~-dG~l~~t--d~~~g~ 153 (305)
T 3dr2_A 85 TAFTNGNAVDAQQRLVHCEHGRRAITRSDA-DGQ-----AHL--LVGRYAGKRLNSPNDLIVAR-DGAIWFT--DPPFGL 153 (305)
T ss_dssp CSCEEEEEECTTSCEEEEETTTTEEEEECT-TSC-----EEE--EECEETTEECSCCCCEEECT-TSCEEEE--CCSGGG
T ss_pred CCccceeeECCCCCEEEEECCCCEEEEECC-CCC-----EEE--EEeccCCCccCCCCCEEECC-CCCEEEe--CcCCCc
Confidence 346899999999997776666689999985 465 221 221 1222225789999997 8999994 321 0
Q ss_pred ------------CccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCC-----CeEEEEccCCcE
Q 039428 125 ------------NKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVS-----SKIWKVGVEGQL 186 (335)
Q Consensus 125 ------------~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~-----~~I~~~d~~g~~ 186 (335)
.....|+++|++++++..... ...|+++++++||+ +|++++.. ++|++++.++..
T Consensus 154 ~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~-------~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 154 RKPSQGCPADPELAHHSVYRLPPDGSPLQRMAD-------LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp SCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEE-------ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred cccccccccccccCCCeEEEEcCCCCcEEEEec-------CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 012579999998776553221 46789999999996 99999874 899999976533
Q ss_pred EEEecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCC-cE
Q 039428 187 LSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPT-KL 265 (335)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g-~l 265 (335)
... ...+... ....|+||+++++|+||++. .+.|+++++++. ....+..+. .|..+++.+++ .|
T Consensus 227 l~~--~~~~~~~----~~~~pdgi~~d~~G~lwv~~--~~gv~~~~~~g~--~~~~~~~~~-----~~~~~~f~~d~~~L 291 (305)
T 3dr2_A 227 LHD--RRHFASV----PDGLPDGFCVDRGGWLWSSS--GTGVCVFDSDGQ--LLGHIPTPG-----TASNCTFDQAQQRL 291 (305)
T ss_dssp EEE--EEEEECC----SSSCCCSEEECTTSCEEECC--SSEEEEECTTSC--EEEEEECSS-----CCCEEEECTTSCEE
T ss_pred ccC--CeEEEEC----CCCCCCeEEECCCCCEEEec--CCcEEEECCCCC--EEEEEECCC-----ceeEEEEeCCCCEE
Confidence 210 0011100 12358999999999999997 456999999776 666666532 38899998776 69
Q ss_pred EEEecCCCeEEEEE
Q 039428 266 VVAGNPYPSARLVE 279 (335)
Q Consensus 266 ~va~~~~~~~~v~~ 279 (335)
|++.. +++..++
T Consensus 292 ~it~~--~~l~~~~ 303 (305)
T 3dr2_A 292 FITGG--PCLWMLP 303 (305)
T ss_dssp EEEET--TEEEEEE
T ss_pred EEEcC--CeEEEEE
Confidence 99977 5565443
No 70
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.65 E-value=3.7e-14 Score=134.53 Aligned_cols=232 Identities=12% Similarity=0.044 Sum_probs=141.6
Q ss_pred hhhhcCCCceeEEE-cCCCcceeeeEEcCCCCEEEEEe----------cCCeEEEEECCCCCCCcceeeeeEEeecC--C
Q 039428 31 AIAMAKPATHVYQY-HSPSFLCETAKWDDVGRRFLVSF----------LDGGVGQVLVPDEYSPGTVLEEVKLVKED--D 97 (335)
Q Consensus 31 ~~~~~d~~~~~~~~-~~~~~~pegia~d~~g~~~~~~~----------~~~~I~~~d~~~g~~~~~v~~~~~~~~~~--~ 97 (335)
.+.+.|..+.++.- -..+..| +++++|+|+.+|++. .++.|.+||..+.+ ++.+ +..+ .
T Consensus 100 ~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~----vv~~---I~v~g~~ 171 (426)
T 3c75_H 100 QQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL----PIAD---IELPDAP 171 (426)
T ss_dssp EEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC----EEEE---EEETTCC
T ss_pred eEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc----EEEE---EECCCcc
Confidence 44455554433221 1124579 999999999888883 35689999965444 2332 2222 1
Q ss_pred --cCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCc----e------------
Q 039428 98 --VVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADD----I------------ 159 (335)
Q Consensus 98 --~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~----~------------ 159 (335)
..+..|.+++++++++++||++.... +.|.++|.++++++..+++.+. ....|.+ +
T Consensus 172 r~~~g~~P~~~~~spDGk~lyV~n~~~~----~~VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~v~~~~dG~~~~V~ 245 (426)
T 3c75_H 172 RFLVGTYQWMNALTPDNKNLLFYQFSPA----PAVGVVDLEGKTFDRMLDVPDC--YHIFPASPTVFYMNCRDGSLARVD 245 (426)
T ss_dssp CCCBSCCGGGSEECTTSSEEEEEECSSS----CEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSSEEEEE
T ss_pred ccccCCCcceEEEcCCCCEEEEEecCCC----CeEEEEECCCCeEEEEEEcCCc--eeeccCCCcEEEEEcCCCCEEEEE
Confidence 11357999999997789999754211 4699999999987755544210 0011111 2
Q ss_pred -------------------------eECCCC-cEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCe---E
Q 039428 160 -------------------------AVDAEG-NAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNG---I 210 (335)
Q Consensus 160 -------------------------~vd~~G-~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~G---i 210 (335)
.++++| ++|++. ..++|+++|..+....++..-.............|.| +
T Consensus 246 ~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s-~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~v 324 (426)
T 3c75_H 246 FADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPT-YTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQT 324 (426)
T ss_dssp CCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEB-TTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCE
T ss_pred CCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEe-CCCcEEEEeccCCceEEeeeeeeccccccccccccCCceee
Confidence 234443 244432 3456666666544333221100000000111223445 9
Q ss_pred EEccCC-eEEEEEC---------CCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc--EEEEecCCCeEEEE
Q 039428 211 VYHPDG-FLIVIHM---------CSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK--LVVAGNPYPSARLV 278 (335)
Q Consensus 211 a~~~dg-~Lyvad~---------~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~--l~va~~~~~~~~v~ 278 (335)
++++|+ +|||++. .+++|.+||....+ .+..+++.+ .|+||+++++|+ +|+++..++.+.|+
T Consensus 325 a~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k-vv~~I~vg~-----~P~gia~spDg~~~lyv~n~~s~~VsVI 398 (426)
T 3c75_H 325 AYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE-RINKIELGH-----EIDSINVSQDAEPLLYALSAGTQTLHIY 398 (426)
T ss_dssp EEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC-EEEEEEEEE-----EECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred EEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe-EEEEEECCC-----CcCeEEEccCCCEEEEEEcCCCCeEEEE
Confidence 999998 9999975 24689999999876 667777533 399999999986 77777677999999
Q ss_pred EcCCC
Q 039428 279 ESSDG 283 (335)
Q Consensus 279 ~~~~~ 283 (335)
+....
T Consensus 399 D~~t~ 403 (426)
T 3c75_H 399 DAATG 403 (426)
T ss_dssp ETTTC
T ss_pred ECCCC
Confidence 98654
No 71
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.63 E-value=5.7e-14 Score=126.59 Aligned_cols=204 Identities=14% Similarity=0.142 Sum_probs=138.4
Q ss_pred cceeeeEEcCC-CCEEEEEecCCeEEEEECCCCCCCcceeeeeEE-eec-CCcCCCCcceEEEeCCCCeEEEEEecCC--
Q 039428 49 FLCETAKWDDV-GRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKL-VKE-DDVVGNATMGIAVDRPRNRLLVAFTDVL-- 123 (335)
Q Consensus 49 ~~pegia~d~~-g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~-~~~-~~~~~~~p~Gi~~d~~~g~l~v~~~D~~-- 123 (335)
..|.+++++++ |++|+++. .+.|+++|.. ++ +. .+ ... .......+++|++|+ +|++|++.....
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~-----~~--~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~ 140 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GT-----FE--EIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVA 140 (314)
T ss_dssp CCEEEEEECSSSSEEEEEET-TTEEEEEETT-SC-----EE--ECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCT
T ss_pred CCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CC-----EE--EEEeccCCCccccCCcCEEECC-CCCEEEEecCcccc
Confidence 35889999999 77776664 4589999964 54 22 12 211 111224689999997 789999643210
Q ss_pred --------CCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeEC----CCC-cEEEEeCCCCeEEEEccC--CcEEE
Q 039428 124 --------GNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVD----AEG-NAYVTDVVSSKIWKVGVE--GQLLS 188 (335)
Q Consensus 124 --------~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd----~~G-~lyV~d~~~~~I~~~d~~--g~~~~ 188 (335)
......|+++|++ ++...... ....|++++++ ++| .+|+++...++|++++.+ ++...
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~------~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~ 213 (314)
T 1pjx_A 141 PADYTRSMQEKFGSIYCFTTD-GQMIQVDT------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN 213 (314)
T ss_dssp TSCCCBTTSSSCEEEEEECTT-SCEEEEEE------EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE
T ss_pred cccccccccCCCCeEEEECCC-CCEEEecc------CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc
Confidence 0001469999987 55442221 14568899999 998 699999999999999964 43221
Q ss_pred --EecCCccccccccccc-cccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-
Q 039428 189 --IIRSPLFTAKEWYKNV-FGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK- 264 (335)
Q Consensus 189 --~~~~~~~~~~~~~~~~-~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~- 264 (335)
.+. .+.. .. ..|++|+++++|+||+++..++.|+++++++++ ....+.... ..|.+++++++|+
T Consensus 214 ~~~~~--~~~~-----~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~-~~~~~~~~~----~~~~~i~~~~dg~~ 281 (314)
T 1pjx_A 214 KKVWG--HIPG-----THEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ-PKMRIRCPF----EKPSNLHFKPQTKT 281 (314)
T ss_dssp EEEEE--ECCC-----CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS-CSEEEECSS----SCEEEEEECTTSSE
T ss_pred ceEEE--ECCC-----CCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc-EeEEEeCCC----CCceeEEECCCCCE
Confidence 110 0110 11 358999999999999999889999999998432 444454332 4589999999997
Q ss_pred EEEEecCCCeEEEEEcC
Q 039428 265 LVVAGNPYPSARLVESS 281 (335)
Q Consensus 265 l~va~~~~~~~~v~~~~ 281 (335)
||+++...+++.+++..
T Consensus 282 l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 282 IFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEEEETTTTEEEEEECS
T ss_pred EEEEeCCCCeEEEEeCC
Confidence 99997755678777754
No 72
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.62 E-value=3.5e-13 Score=120.89 Aligned_cols=227 Identities=13% Similarity=0.085 Sum_probs=155.0
Q ss_pred CCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCC
Q 039428 59 VGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTW 138 (335)
Q Consensus 59 ~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~ 138 (335)
.+++++++..+++|+.+|..+|+ ++.+ + ..+. ...++.+.+++ +|++|++ .+ ..|+.||+ ++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~----~~w~--~-~~~~--~~~~~~~~~~p-dG~ilvs-~~------~~V~~~d~-~G 65 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKE----IVWE--Y-PLEK--GWECNSVAATK-AGEILFS-YS------KGAKMITR-DG 65 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTE----EEEE--E-ECCT--TCCCCEEEECT-TSCEEEE-CB------SEEEEECT-TS
T ss_pred CCcEEEeeCCCCEEEEEECCCCe----EEEE--e-CCCc--cCCCcCeEECC-CCCEEEe-CC------CCEEEECC-CC
Confidence 35677777778999999965676 1221 1 1111 12578999997 8899993 22 46999999 67
Q ss_pred eEEEEeecCCCccCCCCCCceeECCCCcEEEEeCC-CCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccCCe
Q 039428 139 KRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV-SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGF 217 (335)
Q Consensus 139 ~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~-~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~ 217 (335)
++++...... ....+.+.+.++|+++|++.. +++|+.++++|+.+..+.-.. +.......+.+++++++|+
T Consensus 66 ~~~W~~~~~~----~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~----~~~~~~~~~~~v~~~~~G~ 137 (276)
T 3no2_A 66 RELWNIAAPA----GCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFET----GIERPHAQFRQINKNKKGN 137 (276)
T ss_dssp CEEEEEECCT----TCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECC----SCSSGGGSCSCCEECTTSC
T ss_pred CEEEEEcCCC----CccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccC----CCCcccccccCceECCCCC
Confidence 7776655421 124567889999999999988 899999999998876442110 0001223478899999999
Q ss_pred EEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEee-eecCC
Q 039428 218 LIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETASVVA-KFNGP 296 (335)
Q Consensus 218 Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~-~~~~p 296 (335)
+++++..+++|+.+|+++. .+..+... ..|.++.+.++|++++++...+.+..++...+-..-+... .+...
T Consensus 138 ~lv~~~~~~~v~~~d~~G~--~~w~~~~~-----~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~ 210 (276)
T 3no2_A 138 YLVPLFATSEVREIAPNGQ--LLNSVKLS-----GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGV 210 (276)
T ss_dssp EEEEETTTTEEEEECTTSC--EEEEEECS-----SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSC
T ss_pred EEEEecCCCEEEEECCCCC--EEEEEECC-----CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCc
Confidence 9999999999999999954 55555532 2488999999999999976445666676654511111111 12222
Q ss_pred CCCcceEEEEe-CCeEEEEeccC
Q 039428 297 THRVATAATVK-DGRVYLSHLLG 318 (335)
Q Consensus 297 ~~~~Pt~va~~-~g~lyV~~~~~ 318 (335)
.+..|+++++. +|++||++.-|
T Consensus 211 ~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 211 QLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp CCSEEEEEEECTTSCEEEEEECT
T ss_pred cccccccceEcCCCCEEEEeccC
Confidence 35668898885 99999977533
No 73
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.61 E-value=6.3e-13 Score=117.09 Aligned_cols=194 Identities=13% Similarity=0.158 Sum_probs=130.4
Q ss_pred cCCCcceeeeEEcCCCCEEEEEecC--CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecC
Q 039428 45 HSPSFLCETAKWDDVGRRFLVSFLD--GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDV 122 (335)
Q Consensus 45 ~~~~~~pegia~d~~g~~~~~~~~~--~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~ 122 (335)
+....+-+|+.++ ++.+|..+... .+|.++|..+++ ++.+ . ..+.. -...||+++ +++||+++ .
T Consensus 39 hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgk----v~~~--~-~l~~~--~FgeGit~~--g~~ly~lt--w 104 (262)
T 3nol_A 39 HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGK----TLQQ--I-ELGKR--YFGEGISDW--KDKIVGLT--W 104 (262)
T ss_dssp CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCC----EEEE--E-ECCTT--CCEEEEEEE--TTEEEEEE--S
T ss_pred CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCc----EEEE--E-ecCCc--cceeEEEEe--CCEEEEEE--e
Confidence 3455677999999 56554444444 489999976665 3332 2 22221 123578887 68999964 3
Q ss_pred CCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC-cEEEEecCCcccccccc
Q 039428 123 LGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG-QLLSIIRSPLFTAKEWY 201 (335)
Q Consensus 123 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~~~~~~~ 201 (335)
.. +.+++||+++.+++..++.+ ...++++.| .+++|++|. +++|+.+|+++ +....+.... . .
T Consensus 105 ~~---~~v~v~D~~t~~~~~ti~~~------~eG~glt~d-g~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~--~---g 168 (262)
T 3nol_A 105 KN---GLGFVWNIRNLRQVRSFNYD------GEGWGLTHN-DQYLIMSDG-TPVLRFLDPESLTPVRTITVTA--H---G 168 (262)
T ss_dssp SS---SEEEEEETTTCCEEEEEECS------SCCCCEEEC-SSCEEECCS-SSEEEEECTTTCSEEEEEECEE--T---T
T ss_pred eC---CEEEEEECccCcEEEEEECC------CCceEEecC-CCEEEEECC-CCeEEEEcCCCCeEEEEEEecc--C---C
Confidence 22 46999999999888655542 244667754 257999985 78999999985 4433222110 0 0
Q ss_pred ccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCC--------cCCCCCCeEEEcCCC-cEEEEec
Q 039428 202 KNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGG--------SSLSLGDGLALLSPT-KLVVAGN 270 (335)
Q Consensus 202 ~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~--------~~~~~pdGia~d~~g-~l~va~~ 270 (335)
.....+|.+.+. +|.||++...++.|.+||+.+++ ....++..+- .....|.|||+|+++ +|||++-
T Consensus 169 ~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~-V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 169 EELPELNELEWV-DGEIFANVWQTNKIVRIDPETGK-VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCB-EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ccccccceeEEE-CCEEEEEEccCCeEEEEECCCCc-EEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 012347888887 89999999999999999999986 6677776431 112468999999874 7999943
No 74
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.59 E-value=6e-13 Score=117.26 Aligned_cols=191 Identities=16% Similarity=0.141 Sum_probs=130.7
Q ss_pred CCCcceeeeEEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCC
Q 039428 46 SPSFLCETAKWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLG 124 (335)
Q Consensus 46 ~~~~~pegia~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~ 124 (335)
....+-+|+.++. + .+|.+ ...++|.++|..+++ ++.+ .+ .+.. ...|++++ +++||+++ ...
T Consensus 52 d~~~ftqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgk----v~~~--~l-~~~~---FgeGit~~--g~~Ly~lt--w~~ 115 (268)
T 3nok_A 52 ATNAFTQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQ----PVWM--ER-LGNI---FAEGLASD--GERLYQLT--WTE 115 (268)
T ss_dssp CTTCCEEEEEEET-T-EEEEEETTTTEEEECCSSCSS----CSEE--EE-CTTC---CEEEEEEC--SSCEEEEE--SSS
T ss_pred CCccccceEEEEC-C-EEEEEcCCCCEEEEEECCCCc----EEeE--EC-CCCc---ceeEEEEe--CCEEEEEE--ccC
Confidence 4455679999984 4 55555 667889999977666 2332 22 2211 23568876 68999964 322
Q ss_pred CccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCc-EEEEecCCcccccccccc
Q 039428 125 NKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAKEWYKN 203 (335)
Q Consensus 125 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~~~~~~ 203 (335)
+.+++||+++.+++..+... ..+++++.|. +++|++| .+++|+.+|+++. ....+.... . ...
T Consensus 116 ---~~v~V~D~~Tl~~~~ti~~~------~eGwGLt~Dg-~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~--~---g~~ 179 (268)
T 3nok_A 116 ---GLLFTWSGMPPQRERTTRYS------GEGWGLCYWN-GKLVRSD-GGTMLTFHEPDGFALVGAVQVKL--R---GQP 179 (268)
T ss_dssp ---CEEEEEETTTTEEEEEEECS------SCCCCEEEET-TEEEEEC-SSSEEEEECTTTCCEEEEEECEE--T---TEE
T ss_pred ---CEEEEEECCcCcEEEEEeCC------CceeEEecCC-CEEEEEC-CCCEEEEEcCCCCeEEEEEEeCC--C---Ccc
Confidence 46999999999888665542 2356777653 4799999 5899999999863 333221110 0 011
Q ss_pred ccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccC---------CcCCCCCCeEEEcCC-CcEEEEec
Q 039428 204 VFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRG---------GSSLSLGDGLALLSP-TKLVVAGN 270 (335)
Q Consensus 204 ~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g---------~~~~~~pdGia~d~~-g~l~va~~ 270 (335)
...+|.+.+. +|.||++...++.|.+||+.+++ ....+++.+ ......|.|||+|++ ++|||++-
T Consensus 180 v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~-V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 180 VELINELECA-NGVIYANIWHSSDVLEIDPATGT-VVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp CCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCB-EEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred cccccccEEe-CCEEEEEECCCCeEEEEeCCCCc-EEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 2357899988 88999999999999999999885 667777542 011246899999987 48999943
No 75
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.58 E-value=1.8e-12 Score=113.19 Aligned_cols=203 Identities=18% Similarity=0.198 Sum_probs=134.6
Q ss_pred cCCCcceeeeEEcCCCCEEEEEec--CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecC
Q 039428 45 HSPSFLCETAKWDDVGRRFLVSFL--DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDV 122 (335)
Q Consensus 45 ~~~~~~pegia~d~~g~~~~~~~~--~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~ 122 (335)
+....+-+|+.++. +.+|..+.. .++|.++|..+++ ++. .+..+... ...|++++ +++||+++ .
T Consensus 17 hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgk----v~~---~~~l~~~~--fgeGi~~~--~~~ly~lt--w 82 (243)
T 3mbr_X 17 HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGR----ILQ---RAEVPPPY--FGAGIVAW--RDRLIQLT--W 82 (243)
T ss_dssp CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCC----EEE---EEECCTTC--CEEEEEEE--TTEEEEEE--S
T ss_pred CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCC----EEE---EEeCCCCc--ceeEEEEe--CCEEEEEE--e
Confidence 45566889999987 444444433 3589999986665 233 22223211 33577776 69999964 3
Q ss_pred CCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCc-EEEEecCCcccccccc
Q 039428 123 LGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAKEWY 201 (335)
Q Consensus 123 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~~~~ 201 (335)
.. +.+++||+++.+++..+... ..+++++-| .+++|++|. +++|+.+|++.. ....+.... . .
T Consensus 83 ~~---~~v~v~D~~tl~~~~ti~~~------~~Gwglt~d-g~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~--~---g 146 (243)
T 3mbr_X 83 RN---HEGFVYDLATLTPRARFRYP------GEGWALTSD-DSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTA--G---G 146 (243)
T ss_dssp SS---SEEEEEETTTTEEEEEEECS------SCCCEEEEC-SSCEEEECS-SSEEEEECTTTCCEEEEEECEE--T---T
T ss_pred eC---CEEEEEECCcCcEEEEEeCC------CCceEEeeC-CCEEEEECC-CCeEEEEeCCCCeEEEEEEEcc--C---C
Confidence 33 46999999999888655542 245677654 357999995 899999999863 333222110 0 0
Q ss_pred ccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCC---------cCCCCCCeEEEcCC-CcEEEEecC
Q 039428 202 KNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGG---------SSLSLGDGLALLSP-TKLVVAGNP 271 (335)
Q Consensus 202 ~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~---------~~~~~pdGia~d~~-g~l~va~~~ 271 (335)
.....+|.+.+. +|.||++...++.|.+||+.+++ ....+++.+- .....|.|||+|++ ++|||++-.
T Consensus 147 ~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~-V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 147 RPLDNLNELEWV-NGELLANVWLTSRIARIDPASGK-VVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCB-EEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred cccccceeeEEe-CCEEEEEECCCCeEEEEECCCCC-EEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 012347888877 88999999999999999999986 6677775431 11246899999987 489999431
Q ss_pred CCeEEEEE
Q 039428 272 YPSARLVE 279 (335)
Q Consensus 272 ~~~~~v~~ 279 (335)
=+.+.-++
T Consensus 225 wp~~~~v~ 232 (243)
T 3mbr_X 225 WPMLYEIR 232 (243)
T ss_dssp CSEEEEEE
T ss_pred CCcEEEEE
Confidence 14444343
No 76
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.58 E-value=5.5e-14 Score=130.59 Aligned_cols=201 Identities=16% Similarity=0.217 Sum_probs=126.0
Q ss_pred CCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCC----CcEEEEeCCC--
Q 039428 101 NATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE----GNAYVTDVVS-- 174 (335)
Q Consensus 101 ~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~----G~lyV~d~~~-- 174 (335)
..|.+|++++ +|+|||+ +.. ++|++++ .++......++....+...|++|+++|+ |.+||+++..
T Consensus 31 ~~P~~ia~~p-dG~l~V~--e~~----g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~ 101 (352)
T 2ism_A 31 EVPWALAFLP-DGGMLIA--ERP----GRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEG 101 (352)
T ss_dssp SCEEEEEECT-TSCEEEE--ETT----TEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTT
T ss_pred CCceEEEEcC-CCeEEEE--eCC----CeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCC
Confidence 3789999997 7899995 443 3699998 3443322223211123578999999998 7899998764
Q ss_pred ---CeEEEEccCCcE----EEEecCCccccccccccccccCeEEEccCCeEEEEECC-------------CCEEEEEeCC
Q 039428 175 ---SKIWKVGVEGQL----LSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMC-------------SGNLFKIDIR 234 (335)
Q Consensus 175 ---~~I~~~d~~g~~----~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~-------------~~~v~~~d~~ 234 (335)
++|++++.++.. ..++.. + |........+++|+++|||+||+++.. .++|+|++++
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~l~~~--~--p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~d 177 (352)
T 2ism_A 102 GLRNQVVRLRHLGERGVLDRVVLDG--I--PARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPE 177 (352)
T ss_dssp SSEEEEEEEEECSSCEEEEEEEEEE--E--CCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTT
T ss_pred CCccEEEEEEeCCCCcCceEEEEEe--C--CCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCC
Confidence 799999987531 111210 1 100112345899999999999999742 3799999998
Q ss_pred CCc-----------eeEEEEeccCCcCCCCCCeEEEcC-CCcEEEEecCCCe--------EEEEEcCC--CcEEEE----
Q 039428 235 KEE-----------EEVKLIELRGGSSLSLGDGLALLS-PTKLVVAGNPYPS--------ARLVESSD--GWETAS---- 288 (335)
Q Consensus 235 ~~~-----------~~~~~~~~~g~~~~~~pdGia~d~-~g~l~va~~~~~~--------~~v~~~~~--~~~~~~---- 288 (335)
+.- ...+.+.. | +..|.|+++|+ +|+||+++.+.+. +.++.... +|...+
T Consensus 178 G~~p~~npf~~~~~~~~~i~a~-G---~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~ 253 (352)
T 2ism_A 178 GEPAPGNPFLGRRGARPEVYSL-G---HRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGN 253 (352)
T ss_dssp SSBCTTCTTTTCTTSCTTEEEE-C---CSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCC
T ss_pred CCCCCCCcccCCCCCCccEEEE-c---CCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCC
Confidence 720 02233432 2 45699999999 7899999775444 33333221 121000
Q ss_pred ----EeeeecCCCCCcceEEEEeCCeEEEEeccC
Q 039428 289 ----VVAKFNGPTHRVATAATVKDGRVYLSHLLG 318 (335)
Q Consensus 289 ----~~~~~~~p~~~~Pt~va~~~g~lyV~~~~~ 318 (335)
.......+.+..|+++++-+|++||++..+
T Consensus 254 ~~~~~~p~~~~~~~~ap~G~~~~~G~l~v~~~~~ 287 (352)
T 2ism_A 254 DPRYRDPLYFWPQGFPPGNLAFFRGDLYVAGLRG 287 (352)
T ss_dssp CTTSCCCSEECTTCCCEEEEEEETTEEEEEETTT
T ss_pred CCCCcCCeEecCCCCCCcceEEECCEEEEEECCC
Confidence 001112233456889999889999977544
No 77
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.57 E-value=5.9e-12 Score=116.85 Aligned_cols=222 Identities=15% Similarity=0.184 Sum_probs=154.0
Q ss_pred cceeeeEEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 49 FLCETAKWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
..+.+++|+++|+.++++ ..++.|..||..+++ ++. .+..+ ..+.++++++++..||++..+.
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~----~~~---~~~~~----~~v~~~~~spdg~~l~~~~~~~----- 95 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN----VIA---TVPAG----SSPQGVAVSPDGKQVYVTNMAS----- 95 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE----EEE---EEECS----SSEEEEEECTTSSEEEEEETTT-----
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCe----EEE---EEECC----CCccceEECCCCCEEEEEECCC-----
Confidence 348999999999977666 678999999965454 122 22222 2678999998666687753221
Q ss_pred ceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCCcE-EEEecCCcccccccccccc
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEGQL-LSIIRSPLFTAKEWYKNVF 205 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g~~-~~~~~~~~~~~~~~~~~~~ 205 (335)
..|.+||.++++....... ...+.+++++++|+ +|++....+.|+.+|..... ...+. ...
T Consensus 96 ~~v~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-----------~~~ 158 (391)
T 1l0q_A 96 STLSVIDTTSNTVAGTVKT------GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS-----------VGR 158 (391)
T ss_dssp TEEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-----------CCS
T ss_pred CEEEEEECCCCeEEEEEeC------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe-----------cCC
Confidence 3699999999887644432 24578999999986 88999989999999986543 33221 123
Q ss_pred ccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEec--CCCeEEEEEcC
Q 039428 206 GLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGN--PYPSARLVESS 281 (335)
Q Consensus 206 ~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~--~~~~~~v~~~~ 281 (335)
.+.+++++|+| .||++...+++|+.+|+..++ ....+... ..+.++++.++|+ +|+++. ..+.+++++..
T Consensus 159 ~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~-~~~~~~~~-----~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS-VIDTVKVE-----AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEECS-----SEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCCe-EEEEEecC-----CCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 47899999999 788999999999999998873 44444422 2378999999985 666653 44778888876
Q ss_pred CCcEEEEEeeeecCCCCCcceEEEEe--CCeEEEEe
Q 039428 282 DGWETASVVAKFNGPTHRVATAATVK--DGRVYLSH 315 (335)
Q Consensus 282 ~~~~~~~~~~~~~~p~~~~Pt~va~~--~g~lyV~~ 315 (335)
.+ +....+.. ...|.++++. +..||++.
T Consensus 233 ~~----~~~~~~~~--~~~~~~~~~s~dg~~l~~s~ 262 (391)
T 1l0q_A 233 TN----KITARIPV--GPDPAGIAVTPDGKKVYVAL 262 (391)
T ss_dssp TT----EEEEEEEC--CSSEEEEEECTTSSEEEEEE
T ss_pred CC----eEEEEEec--CCCccEEEEccCCCEEEEEc
Confidence 54 22223322 2336677774 44577754
No 78
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.56 E-value=1.1e-12 Score=118.89 Aligned_cols=220 Identities=14% Similarity=0.128 Sum_probs=139.3
Q ss_pred EEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEE
Q 039428 55 KWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAY 133 (335)
Q Consensus 55 a~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~ 133 (335)
.++.+++.+|++ ..+++|.++|..+++ +.. .+..+ ...+ ++++++++..+|++..+. ..|++|
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~----~~~---~~~~~---~~~~-~~~~s~dg~~l~~~~~~~-----~~i~~~ 67 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLE----ILN---QITLG---YDFV-DTAITSDCSNVVVTSDFC-----QTLVQI 67 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCC----EEE---EEECC---CCEE-EEEECSSSCEEEEEESTT-----CEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccc----eee---eEEcc---CCcc-eEEEcCCCCEEEEEeCCC-----CeEEEE
Confidence 456666766666 778999999965554 122 22222 1346 999998555688864321 369999
Q ss_pred ECCCCeE-EEEeecCCCccCCCCCCc-eeECCCCc-EEEEeCCCC--eEEEEccCCcEE-EEecCCcccccccccccccc
Q 039428 134 DLSTWKR-LFLTQLSGKSEEKSTADD-IAVDAEGN-AYVTDVVSS--KIWKVGVEGQLL-SIIRSPLFTAKEWYKNVFGL 207 (335)
Q Consensus 134 d~~~~~~-~~~~~~~~~~~~~~~p~~-~~vd~~G~-lyV~d~~~~--~I~~~d~~g~~~-~~~~~~~~~~~~~~~~~~~p 207 (335)
|++++++ ...... ...|.. ++++|+|+ +|+++..++ .|+++|.+.... ..+. ....|
T Consensus 68 d~~~~~~~~~~~~~------~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~-----------~~~~~ 130 (331)
T 3u4y_A 68 ETQLEPPKVVAIQE------GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP-----------IPYDA 130 (331)
T ss_dssp ECSSSSCEEEEEEE------CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE-----------CCTTE
T ss_pred ECCCCceeEEeccc------CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE-----------CCCCc
Confidence 9998876 432222 345667 99999997 664333334 899999875443 3221 12348
Q ss_pred CeEEEccCC-eEEEEECCCCE-EEEEeCCCCcee----EEEEeccCCcCCCCCCeEEEcCCCc-EEEEecCCCeEEEEEc
Q 039428 208 NGIVYHPDG-FLIVIHMCSGN-LFKIDIRKEEEE----VKLIELRGGSSLSLGDGLALLSPTK-LVVAGNPYPSARLVES 280 (335)
Q Consensus 208 ~Gia~~~dg-~Lyvad~~~~~-v~~~d~~~~~~~----~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~~~~~~~v~~~ 280 (335)
++++++||| +||+++...++ |..++++..+.. .+.+. .+ ..|.+++++++|+ +|+++...+.+.+++.
T Consensus 131 ~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~-~~----~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 205 (331)
T 3u4y_A 131 VGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFIS-GG----TRPFNITFTPDGNFAFVANLIGNSIGILET 205 (331)
T ss_dssp EEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEEC-SS----SSEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred cceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCcccc-CC----CCccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 999999999 79999988777 777777654211 11221 12 3489999999996 8999776678999887
Q ss_pred CCCcEEEEEeeeecCCCCCcceEEEEe-CC-eEEEEe
Q 039428 281 SDGWETASVVAKFNGPTHRVATAATVK-DG-RVYLSH 315 (335)
Q Consensus 281 ~~~~~~~~~~~~~~~p~~~~Pt~va~~-~g-~lyV~~ 315 (335)
..+-. .+....+. ....|.++++. +| .||++.
T Consensus 206 ~~~~~-~~~~~~~~--~~~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 206 QNPEN-ITLLNAVG--TNNLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp SSTTS-CEEEEEEE--CSSCCCCEEECTTSSEEEEEC
T ss_pred CCCcc-cceeeecc--CCCCCceEEECCCCCEEEEEE
Confidence 65522 01122232 23456788885 44 488754
No 79
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.55 E-value=6.9e-12 Score=115.56 Aligned_cols=245 Identities=10% Similarity=0.094 Sum_probs=145.6
Q ss_pred CCcceeeeEEcCCCCEEEEEec----CCeE--EEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEe
Q 039428 47 PSFLCETAKWDDVGRRFLVSFL----DGGV--GQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFT 120 (335)
Q Consensus 47 ~~~~pegia~d~~g~~~~~~~~----~~~I--~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~ 120 (335)
....|..++|+|+|+.+|+... ++.| +.++..++. +.. +...+. .+..|..++++ ++.||+++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~-----~~~--~~~~~~-~~~~p~~~~~d--g~~l~~~~- 116 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGT-----LHL--LNTQKT-MGADPCYLTTN--GKNIVTAN- 116 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTE-----EEE--EEEEEC-SSSCEEEEEEC--SSEEEEEE-
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCc-----EEE--eeEecc-CCCCcEEEEEC--CCEEEEEE-
Confidence 3456889999999997777733 3676 455532243 221 111111 12467888883 67888854
Q ss_pred cCCCCccceEEEEECCCC-eEE---EEeecCCCc-----cCCCCCCceeECCCCc-EEEEeCCCCeEEEEccC--Cc---
Q 039428 121 DVLGNKYSALAAYDLSTW-KRL---FLTQLSGKS-----EEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVE--GQ--- 185 (335)
Q Consensus 121 D~~~~~~~~v~~~d~~~~-~~~---~~~~~~~~~-----~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~--g~--- 185 (335)
... +.|.+|+.+.. .+. ......+.+ +....++.++++|+|+ +|+++...+.|++++.+ +.
T Consensus 117 -~~~---~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~ 192 (361)
T 3scy_A 117 -YSG---GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADN 192 (361)
T ss_dssp -TTT---TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTT
T ss_pred -CCC---CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCccc
Confidence 222 35888887643 221 111111100 1134467899999997 99999888888877654 32
Q ss_pred ---EEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEE---EeccCCcCCCCCCeEE
Q 039428 186 ---LLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKL---IELRGGSSLSLGDGLA 258 (335)
Q Consensus 186 ---~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~---~~~~g~~~~~~pdGia 258 (335)
....-...... .....+|++++++||| +||+++..+++|.+++++.+ .... +.... .....|.+++
T Consensus 193 ~~~l~~~~~~~~~~----~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g--~~~~~~~~~~~~-~~~~~~~~i~ 265 (361)
T 3scy_A 193 KEKFLTKGTPEAFK----VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG--MLDEIQTVAADT-VNAQGSGDIH 265 (361)
T ss_dssp CCCCEEEEEEEEEE----CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT--EEEEEEEEESCS-SCCCCEEEEE
T ss_pred ccceeeccccccee----cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC--ceEEeEEEecCC-CCCCCcccEE
Confidence 21100000000 0123458899999999 79999988999999998865 3322 22211 1134577999
Q ss_pred EcCCCc-EEEEecC-CCeEEEEEcCC-CcEEEEEeeeecCCCCCcceEEEEe-C-CeEEEEec
Q 039428 259 LLSPTK-LVVAGNP-YPSARLVESSD-GWETASVVAKFNGPTHRVATAATVK-D-GRVYLSHL 316 (335)
Q Consensus 259 ~d~~g~-l~va~~~-~~~~~v~~~~~-~~~~~~~~~~~~~p~~~~Pt~va~~-~-g~lyV~~~ 316 (335)
++++|+ ||+++.. .+.+.+++.+. ..+ .+....+.. ...|.++++. + ..||++..
T Consensus 266 ~spdg~~l~v~~~~~~~~i~v~~~~~~~g~-~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 266 LSPDGKYLYASNRLKADGVAIFKVDETNGT-LTKVGYQLT--GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEEECTTTCC-EEEEEEEEC--SSCCCEEEECTTSCEEEEEET
T ss_pred ECCCCCEEEEECCCCCCEEEEEEEcCCCCc-EEEeeEecC--CCCCceEEECCCCCEEEEEEC
Confidence 999996 7788765 57788877642 111 122333322 3457789985 4 45888653
No 80
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.55 E-value=5.3e-12 Score=113.09 Aligned_cols=212 Identities=16% Similarity=0.166 Sum_probs=145.0
Q ss_pred hhhhhhcCCCceeEEEc--CCC-cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcce
Q 039428 29 ELAIAMAKPATHVYQYH--SPS-FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMG 105 (335)
Q Consensus 29 ~~~~~~~d~~~~~~~~~--~~~-~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~G 105 (335)
...+.+.|..+..+.+. ... ..+.+++++++|++++ + .++.|+.+|+ +++ ++.+ + ..+. ....++
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s-~~~~V~~~d~-~G~----~~W~--~-~~~~--~~~~~~ 81 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-S-YSKGAKMITR-DGR----ELWN--I-AAPA--GCEMQT 81 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-E-CBSEEEEECT-TSC----EEEE--E-ECCT--TCEEEE
T ss_pred CCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-e-CCCCEEEECC-CCC----EEEE--E-cCCC--Cccccc
Confidence 34445556655554442 222 3578999999999887 3 4678999986 676 2221 2 1221 113456
Q ss_pred EEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCC-ccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC
Q 039428 106 IAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGK-SEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG 184 (335)
Q Consensus 106 i~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g 184 (335)
..+.+ +|+++++..+. . .+|+.+|+++ +.++...+... ......+..++++++|+++|++..+++|+.+|++|
T Consensus 82 ~~~~~-dG~~lv~~~~~-~---~~v~~vd~~G-k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G 155 (276)
T 3no2_A 82 ARILP-DGNALVAWCGH-P---STILEVNMKG-EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNG 155 (276)
T ss_dssp EEECT-TSCEEEEEEST-T---EEEEEECTTS-CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTS
T ss_pred cEECC-CCCEEEEecCC-C---CEEEEEeCCC-CEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCC
Confidence 77776 78888853321 1 4699999854 44433333211 01135678899999999999999999999999999
Q ss_pred cEEEEecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccC--CcCCCCCCeEEEcCC
Q 039428 185 QLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRG--GSSLSLGDGLALLSP 262 (335)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g--~~~~~~pdGia~d~~ 262 (335)
+.+..++.+ ..|.++++.++|++++++..+++|+.+|+++++ .+..+...+ ...+..|.++++.++
T Consensus 156 ~~~w~~~~~-----------~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~-~~w~~~~~~~~~~~l~~~~~~~~~~~ 223 (276)
T 3no2_A 156 QLLNSVKLS-----------GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR-IVRRVNANDIEGVQLFFVAQLFPLQN 223 (276)
T ss_dssp CEEEEEECS-----------SCCCEEEECTTSCEEEECBTTSEEEEECTTTCC-EEEEEEGGGSBSCCCSEEEEEEECTT
T ss_pred CEEEEEECC-----------CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc-EEEEecCCCCCCccccccccceEcCC
Confidence 887654321 237889999999999999999999999999553 555554221 123566899999999
Q ss_pred CcEEEEec
Q 039428 263 TKLVVAGN 270 (335)
Q Consensus 263 g~l~va~~ 270 (335)
|++||++.
T Consensus 224 G~i~v~~~ 231 (276)
T 3no2_A 224 GGLYICNW 231 (276)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEec
Confidence 99999974
No 81
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.55 E-value=1.2e-12 Score=121.65 Aligned_cols=237 Identities=8% Similarity=-0.020 Sum_probs=141.2
Q ss_pred hhhhhhhhhhhhhhhcCCCceeEE-Ec--------------CCCcceeeeEEcCC---CCEEEEE-ec---C----CeEE
Q 039428 20 IPIAYIISIELAIAMAKPATHVYQ-YH--------------SPSFLCETAKWDDV---GRRFLVS-FL---D----GGVG 73 (335)
Q Consensus 20 ~p~~~~~~~~~~~~~~d~~~~~~~-~~--------------~~~~~pegia~d~~---g~~~~~~-~~---~----~~I~ 73 (335)
.|.++++..++.+++++.. .+|. +. .....|.|++++|+ ++.+|++ .. + ++|+
T Consensus 30 ~P~~ia~~pdG~l~V~e~~-g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~ 108 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERP-GRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI 108 (354)
T ss_dssp CEEEEEEEETTEEEEEETT-TEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred CCeEEEEcCCCeEEEEeCC-CEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence 3566666666666666544 2221 11 11235899999997 4455555 42 3 6899
Q ss_pred EEECCCCCCCcceeeeeEEee-cCCcCCCCcceEEEeCCCCeEEEEEecCCCC--------ccceEEEEECCCC------
Q 039428 74 QVLVPDEYSPGTVLEEVKLVK-EDDVVGNATMGIAVDRPRNRLLVAFTDVLGN--------KYSALAAYDLSTW------ 138 (335)
Q Consensus 74 ~~d~~~g~~~~~v~~~~~~~~-~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~--------~~~~v~~~d~~~~------ 138 (335)
+++..++.. .+.+...++. .+....+.+.+|++++ +|.||++..|.... ...+|+++|+++.
T Consensus 109 r~~~~~~~~--~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 109 RGRLDGSTF--KLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEECSSSC--CEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEECCCCc--CcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 998543310 0111111222 2221124578999997 78999976543210 1147999998754
Q ss_pred --e-EEEEeecCCCccCCCCCCceeECC-CCcEEEEeCCCC---eEEEEccCCcEEE--Eec---CCcccccccc--ccc
Q 039428 139 --K-RLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVVSS---KIWKVGVEGQLLS--IIR---SPLFTAKEWY--KNV 204 (335)
Q Consensus 139 --~-~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~~---~I~~~d~~g~~~~--~~~---~~~~~~~~~~--~~~ 204 (335)
. .++. .++..|+++++|+ +|++|++|...+ .|.++.+.+..-. ..+ .+.+..|... ...
T Consensus 186 f~~~~i~a-------~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ 258 (354)
T 3a9g_A 186 FPNSPIWS-------YGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSET 258 (354)
T ss_dssp STTCCEEE-------ECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCC
T ss_pred CCCCcEEE-------EccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCC
Confidence 1 1111 1257899999999 799999998764 4777765432100 000 0011111100 123
Q ss_pred cccCeEEE-------ccCCeEEEEECCCCEEEEEeCCCCceeE--EEEeccCCcCCCCCCeEEEcCCCcEEEEec
Q 039428 205 FGLNGIVY-------HPDGFLIVIHMCSGNLFKIDIRKEEEEV--KLIELRGGSSLSLGDGLALLSPTKLVVAGN 270 (335)
Q Consensus 205 ~~p~Gia~-------~~dg~Lyvad~~~~~v~~~d~~~~~~~~--~~~~~~g~~~~~~pdGia~d~~g~l~va~~ 270 (335)
..|.|+++ +.+|.||+++...++|++++++..+... +.+ +.+ . ...|.++++++||.|||++.
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~-~~~-~-~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTF-FKN-V-FGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEE-CTT-T-SCCEEEEEECTTSCEEEEEC
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeee-ccC-C-CCCeeEEEECCCCcEEEEEe
Confidence 46999999 4578999999999999999998642121 222 122 1 35699999999999999965
No 82
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.55 E-value=9e-12 Score=116.50 Aligned_cols=232 Identities=10% Similarity=-0.035 Sum_probs=134.5
Q ss_pred CcceeeeEEcCCCCEEEEEe----------cCCeEEEEECCCCCCCcceeeeeEEeecC--C--cCCCCcceEEEeCCCC
Q 039428 48 SFLCETAKWDDVGRRFLVSF----------LDGGVGQVLVPDEYSPGTVLEEVKLVKED--D--VVGNATMGIAVDRPRN 113 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~----------~~~~I~~~d~~~g~~~~~v~~~~~~~~~~--~--~~~~~p~Gi~~d~~~g 113 (335)
+..| +++++|+|+.+|++. .++.|.++|..+.+ ++.+ +..+ . ..+..|.+++++|+++
T Consensus 66 g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~----~~~~---i~~~~~~~~~~g~~p~~~~~spDG~ 137 (373)
T 2mad_H 66 GFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL----PIAD---IELPDAPRFDVGPYSWMNANTPNNA 137 (373)
T ss_pred CCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc----EEEE---EECCCccccccCCCccceEECCCCC
Confidence 4568 999999999888883 24679999964333 2332 2222 1 0124688999999788
Q ss_pred eEEEEEecCCCCccceEEEEECCCCeEEEE-eecCCCccCCCCCCc----eeECCCC-----------------------
Q 039428 114 RLLVAFTDVLGNKYSALAAYDLSTWKRLFL-TQLSGKSEEKSTADD----IAVDAEG----------------------- 165 (335)
Q Consensus 114 ~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~-~~~~~~~~~~~~p~~----~~vd~~G----------------------- 165 (335)
.||+++.... +.|.++| +++++... ++.+.. ....|.+ +++.++|
T Consensus 138 ~l~v~n~~~~----~~v~viD-~t~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~ 210 (373)
T 2mad_H 138 DLLFFQFAAG----PAVGLVV-QGGSSDDQLLSSPTC--YHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTA 210 (373)
T ss_pred EEEEEecCCC----CeEEEEE-CCCCEEeEEcCCCce--EEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccC
Confidence 8999753211 4599999 99887655 443210 0001111 1112222
Q ss_pred ---------------cEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCe---EEEccCC-eEEEEEC---
Q 039428 166 ---------------NAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNG---IVYHPDG-FLIVIHM--- 223 (335)
Q Consensus 166 ---------------~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~G---ia~~~dg-~Lyvad~--- 223 (335)
.+|+.. ..+.++++|..+....++..-.+...........|.| +++++|+ +|||+..
T Consensus 211 ~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~ 289 (373)
T 2mad_H 211 AQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQS 289 (373)
T ss_pred CcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCC
Confidence 223322 3445666665433222111000000000012223566 8999998 9999864
Q ss_pred ------CCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc--EEEEecCCCeEEEEEcCCCcEEEEEeeeecC
Q 039428 224 ------CSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK--LVVAGNPYPSARLVESSDGWETASVVAKFNG 295 (335)
Q Consensus 224 ------~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~--l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~ 295 (335)
.++.|++||..+.+ .+..+...+ .|+++++++||+ +|+++.+++.+.|++...+ +...++ .
T Consensus 290 ~~~~~~~~~~V~VID~~t~~-vv~~i~~g~-----~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~----~vv~~i-~ 358 (373)
T 2mad_H 290 AWKLHAAAKEVTSVTGLVGQ-TSSQISLGH-----DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG----DQDQST-V 358 (373)
T ss_pred cccccCCCCeEEEEECCCCE-EEEEEECCC-----CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC----CEEeee-c
Confidence 24689999999874 556676532 499999999987 6666656789999997654 333332 1
Q ss_pred CCCCcceEEEE
Q 039428 296 PTHRVATAATV 306 (335)
Q Consensus 296 p~~~~Pt~va~ 306 (335)
+.+..|..+..
T Consensus 359 ~vG~~P~~~~~ 369 (373)
T 2mad_H 359 ELGSGPQVLSV 369 (373)
T ss_pred CCCCCCcEEEE
Confidence 23445666654
No 83
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.54 E-value=1.1e-11 Score=112.17 Aligned_cols=243 Identities=10% Similarity=0.072 Sum_probs=146.2
Q ss_pred CcceeeeEEcCCCCEEEEEec-CCeEEEEECC--CCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCC
Q 039428 48 SFLCETAKWDDVGRRFLVSFL-DGGVGQVLVP--DEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLG 124 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~-~~~I~~~d~~--~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~ 124 (335)
...|.+++|+++|+.+++... ++.|..|+.. ++. ... +...+. ...+.++++++++..||++..+ .
T Consensus 37 ~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~-----~~~--~~~~~~--~~~~~~~~~s~dg~~l~~~~~~--~ 105 (343)
T 1ri6_A 37 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA-----LTF--AAESAL--PGSLTHISTDHQGQFVFVGSYN--A 105 (343)
T ss_dssp SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC-----EEE--EEEEEC--SSCCSEEEECTTSSEEEEEETT--T
T ss_pred CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc-----eee--cccccc--CCCCcEEEEcCCCCEEEEEecC--C
Confidence 346889999999997777744 4888887643 233 121 111111 1267899999855568785321 1
Q ss_pred CccceEEEEECCCCeEE-EEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCC--cEEEEecCCccccccc
Q 039428 125 NKYSALAAYDLSTWKRL-FLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEG--QLLSIIRSPLFTAKEW 200 (335)
Q Consensus 125 ~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g--~~~~~~~~~~~~~~~~ 200 (335)
+.|..||.+.+... ...... ....+++++++++|+ +|+++...+.|++++.+. +...... ..+..
T Consensus 106 ---~~i~~~d~~~~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~--- 174 (343)
T 1ri6_A 106 ---GNVSVTRLEDGLPVGVVDVVE----GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDP-AEVTT--- 174 (343)
T ss_dssp ---TEEEEEEEETTEEEEEEEEEC----CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE-EEEEC---
T ss_pred ---CeEEEEECCCCcccccccccc----CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecc-ccccc---
Confidence 35888888433221 111121 134688999999985 999987888999988753 3322110 00110
Q ss_pred cccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCcee---EEEEec-cCC-cCCCCCCeEEEcCCC-cEEEEecCCC
Q 039428 201 YKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEE---VKLIEL-RGG-SSLSLGDGLALLSPT-KLVVAGNPYP 273 (335)
Q Consensus 201 ~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~---~~~~~~-~g~-~~~~~pdGia~d~~g-~l~va~~~~~ 273 (335)
.....|.+++++|+| +||+++..+++|..++++...+. ...+.. ... .....|.+++++++| .+|+++...+
T Consensus 175 -~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~ 253 (343)
T 1ri6_A 175 -VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTAS 253 (343)
T ss_dssp -STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTT
T ss_pred -CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCC
Confidence 112358899999999 69999989999999998642112 222321 110 001235579999998 4777776557
Q ss_pred eEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe--CCeEEEEe
Q 039428 274 SARLVESSDGWETASVVAKFNGPTHRVATAATVK--DGRVYLSH 315 (335)
Q Consensus 274 ~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~--~g~lyV~~ 315 (335)
.+.+++........+....+... ..|.++++. +..||++.
T Consensus 254 ~i~v~d~~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 254 LITVFSVSEDGSVLSKEGFQPTE--TQPRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp EEEEEEECTTSCCEEEEEEEECS--SSCCCEEECTTSSEEEEEC
T ss_pred EEEEEEEcCCCCceEEeeeecCC--CccceEEECCCCCEEEEec
Confidence 78888876321112233333222 227788885 44577755
No 84
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.54 E-value=1.8e-12 Score=113.16 Aligned_cols=189 Identities=14% Similarity=0.088 Sum_probs=130.3
Q ss_pred CcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEc
Q 039428 102 ATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVG 181 (335)
Q Consensus 102 ~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d 181 (335)
-.+|+.++ +++||+++.... . +.|.++|++++++.....++. ..+..+++++ .+++|+.++..+.++++|
T Consensus 22 ftqGL~~~--~~~LyestG~~g-~--S~v~~vD~~tgkv~~~~~l~~----~~fgeGi~~~-~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 22 FTEGLFYL--RGHLYESTGETG-R--SSVRKVDLETGRILQRAEVPP----PYFGAGIVAW-RDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp CEEEEEEE--TTEEEEEECCTT-S--CEEEEEETTTCCEEEEEECCT----TCCEEEEEEE-TTEEEEEESSSSEEEEEE
T ss_pred ccccEEEE--CCEEEEECCCCC-C--ceEEEEECCCCCEEEEEeCCC----CcceeEEEEe-CCEEEEEEeeCCEEEEEE
Confidence 46799998 489999765432 2 579999999999987666622 2344567776 367999999999999999
Q ss_pred cCCc-EEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccC-CcCCCCCCeEE
Q 039428 182 VEGQ-LLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRG-GSSLSLGDGLA 258 (335)
Q Consensus 182 ~~g~-~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g-~~~~~~pdGia 258 (335)
++.. .+.. +.-+ ..|..+++|+ +||++| ++++|+.+|+.+.+ ....+.+.. ...+..+..+.
T Consensus 92 ~~tl~~~~t-----i~~~--------~~Gwglt~dg~~L~vSd-gs~~l~~iDp~t~~-~~~~I~V~~~g~~~~~lNeLe 156 (243)
T 3mbr_X 92 LATLTPRAR-----FRYP--------GEGWALTSDDSHLYMSD-GTAVIRKLDPDTLQ-QVGSIKVTAGGRPLDNLNELE 156 (243)
T ss_dssp TTTTEEEEE-----EECS--------SCCCEEEECSSCEEEEC-SSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEE
T ss_pred CCcCcEEEE-----EeCC--------CCceEEeeCCCEEEEEC-CCCeEEEEeCCCCe-EEEEEEEccCCcccccceeeE
Confidence 9754 3332 2211 2344444566 999999 58999999999875 556665521 12234455677
Q ss_pred EcCCCcEEEEecCCCeEEEEEcCCCcEEEEEee-eec-------CCCCCcceEEEEe--CCeEEEEec
Q 039428 259 LLSPTKLVVAGNPYPSARLVESSDGWETASVVA-KFN-------GPTHRVATAATVK--DGRVYLSHL 316 (335)
Q Consensus 259 ~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~-~~~-------~p~~~~Pt~va~~--~g~lyV~~~ 316 (335)
.. +|.+|+..+.++.+.+++...+-..+.+.- .+. .+....|.++|++ .++|||+-+
T Consensus 157 ~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 157 WV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred Ee-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 65 789999888789999999877644333321 111 1344578899996 799999753
No 85
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.54 E-value=5.8e-12 Score=111.28 Aligned_cols=215 Identities=12% Similarity=0.160 Sum_probs=140.0
Q ss_pred EcCCCcceeeeEEcCCCCEEEE-EecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecC
Q 039428 44 YHSPSFLCETAKWDDVGRRFLV-SFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDV 122 (335)
Q Consensus 44 ~~~~~~~pegia~d~~g~~~~~-~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~ 122 (335)
+++-..-+.|++++++++.+|+ +..+++|+++|. +++ ++. .+...+. ..+.||+++. ++++||+ +-
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~-~g~----v~~---~i~l~g~--~D~EGIa~~~-~g~~~vs--~E 88 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTT-NGD----LIR---TIPLDFV--KDLETIEYIG-DNQFVIS--DE 88 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEET-TCC----EEE---EEECSSC--SSEEEEEECS-TTEEEEE--ET
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeC-CCC----EEE---EEecCCC--CChHHeEEeC-CCEEEEE--EC
Confidence 3444446899999998776665 466789999996 465 233 2222332 3678999995 7888885 32
Q ss_pred CCCccceEEEEECCCCe---EEEEeecCC-CccCCCCCCceeECCCC-cEEEEeCCCC-eEEEEc--cCCcEEEEecCCc
Q 039428 123 LGNKYSALAAYDLSTWK---RLFLTQLSG-KSEEKSTADDIAVDAEG-NAYVTDVVSS-KIWKVG--VEGQLLSIIRSPL 194 (335)
Q Consensus 123 ~~~~~~~v~~~d~~~~~---~~~~~~~~~-~~~~~~~p~~~~vd~~G-~lyV~d~~~~-~I~~~d--~~g~~~~~~~~~~ 194 (335)
.. +++++|+..... ......+.- .........++++|+++ ++|++..... .||+++ +.+....++..+.
T Consensus 89 ~~---~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~ 165 (255)
T 3qqz_A 89 RD---YAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKA 165 (255)
T ss_dssp TT---TEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHH
T ss_pred CC---CcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchh
Confidence 22 358887754332 122222211 11123456899999986 7999876655 899998 2222222222211
Q ss_pred cccccccccccccCeEEEccC-CeEEEEECCCCEEEEEeCCCCceeEEEEeccCC-----cCCCCCCeEEEcCCCcEEEE
Q 039428 195 FTAKEWYKNVFGLNGIVYHPD-GFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGG-----SSLSLGDGLALLSPTKLVVA 268 (335)
Q Consensus 195 ~~~~~~~~~~~~p~Gia~~~d-g~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~-----~~~~~pdGia~d~~g~l~va 268 (335)
+.. ......+.+|+++|. |+||+....++.|..+|.++. .+....+..+ ..+..|.||++|++|+|||+
T Consensus 166 ~~~---~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv 240 (255)
T 3qqz_A 166 LQR---QFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV 240 (255)
T ss_dssp HHH---TCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE
T ss_pred hcc---ccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE
Confidence 111 012345899999995 599999999999999999987 6667766531 12467999999999999999
Q ss_pred ecCCCeEEEEEc
Q 039428 269 GNPYPSARLVES 280 (335)
Q Consensus 269 ~~~~~~~~v~~~ 280 (335)
+-+ |-.++++.
T Consensus 241 sE~-n~~y~f~~ 251 (255)
T 3qqz_A 241 SEP-NRFYRFTP 251 (255)
T ss_dssp ETT-TEEEEEEC
T ss_pred cCC-ceEEEEEe
Confidence 543 76776653
No 86
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.53 E-value=4.8e-12 Score=117.64 Aligned_cols=256 Identities=7% Similarity=0.009 Sum_probs=141.8
Q ss_pred hhhhcCCCceeEEE-cCCCcceeeeEEcCCCCEEEEEe----------cCCeEEEEECCCCCCCcceeeeeEEeecCCcC
Q 039428 31 AIAMAKPATHVYQY-HSPSFLCETAKWDDVGRRFLVSF----------LDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVV 99 (335)
Q Consensus 31 ~~~~~d~~~~~~~~-~~~~~~pegia~d~~g~~~~~~~----------~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~ 99 (335)
.+.+.|..+.++.- -..+..| +++++|+|+.+|++. .++.|.+||..+.+ ++.++.........
T Consensus 32 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~----~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 32 RVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT----FEKEISLPPKRVQG 106 (361)
T ss_dssp EEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC----EEEEEEECTTBCCB
T ss_pred eEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc----EEEEEEcCcccccc
Confidence 44455554433221 1224568 999999999888883 24579999964333 23321111000112
Q ss_pred CCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEE-eecCCCccCCCCCCc----eeECCCCcE-EEEeCC
Q 039428 100 GNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFL-TQLSGKSEEKSTADD----IAVDAEGNA-YVTDVV 173 (335)
Q Consensus 100 ~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~-~~~~~~~~~~~~p~~----~~vd~~G~l-yV~d~~ 173 (335)
+..|.+|++++++..||+++.+.. +.|.+||.+++++... ++......-...|.+ +++.++|.+ |+....
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~----~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPA----TSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSS----EEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred CCCcceEEECCCCCEEEEECCCCC----CeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 357999999997778999764211 4699999999887654 433110000012322 445555542 222211
Q ss_pred -------------------------------------CCeEEEEccCCcEEEEecCCccccccccccccccC---eEEEc
Q 039428 174 -------------------------------------SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLN---GIVYH 213 (335)
Q Consensus 174 -------------------------------------~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~---Gia~~ 213 (335)
.+.|+.+|..+........-.............|. .++++
T Consensus 183 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~ 262 (361)
T 2oiz_A 183 DGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLH 262 (361)
T ss_dssp TSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEE
T ss_pred CCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEe
Confidence 12233333321111000000000000000111244 49999
Q ss_pred cCC-eEEEEEC----------CCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEecCCCeEEEEEcC
Q 039428 214 PDG-FLIVIHM----------CSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGNPYPSARLVESS 281 (335)
Q Consensus 214 ~dg-~Lyvad~----------~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~~~~~~~v~~~~ 281 (335)
+|+ ++|++.. .+++|+++|+...+ .+..+.. + . |.+|+++++|+ ||+++. +.+.|++..
T Consensus 263 ~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~-~v~~i~~-~----~-p~~ia~spdg~~l~v~n~--~~v~v~D~~ 333 (361)
T 2oiz_A 263 RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ-RVARIPG-R----D-ALSMTIDQQRNLMLTLDG--GNVNVYDIS 333 (361)
T ss_dssp TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE-EEEEEEC-T----T-CCEEEEETTTTEEEEECS--SCEEEEECS
T ss_pred cCCCeEEEEEccCCCcccccCCCceEEEEECCCCc-EEEEEec-C----C-eeEEEECCCCCEEEEeCC--CeEEEEECC
Confidence 997 9999875 24589999999875 5555653 2 3 99999999985 777765 889999875
Q ss_pred CCcEEEEEeeeecCCCCCcceEEEEe
Q 039428 282 DGWETASVVAKFNGPTHRVATAATVK 307 (335)
Q Consensus 282 ~~~~~~~~~~~~~~p~~~~Pt~va~~ 307 (335)
.+. .+.+.++. +.+..|..+++.
T Consensus 334 t~~--l~~~~~i~-~~G~~P~~~~~~ 356 (361)
T 2oiz_A 334 QPE--PKLLRTIE-GAAEASLQVQFH 356 (361)
T ss_dssp SSS--CEEEEEET-TSCSSEEEEEEC
T ss_pred CCc--ceeeEEec-cCCCCcEEEEec
Confidence 430 03344442 345668889885
No 87
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.53 E-value=8.1e-13 Score=116.39 Aligned_cols=187 Identities=12% Similarity=0.044 Sum_probs=129.5
Q ss_pred cceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEcc
Q 039428 103 TMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGV 182 (335)
Q Consensus 103 p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~ 182 (335)
.+||.++ +++||+++.+... +.|.++|++++++.....+.. ..+..+++++. +++|++++..+.++++|+
T Consensus 45 tqGL~~~--~~~LyestG~~g~---S~v~~vD~~Tgkv~~~~~l~~----~~FgeGit~~g-~~ly~ltw~~~~v~v~D~ 114 (262)
T 3nol_A 45 TEGFFYR--NGYFYESTGLNGR---SSIRKVDIESGKTLQQIELGK----RYFGEGISDWK-DKIVGLTWKNGLGFVWNI 114 (262)
T ss_dssp EEEEEEE--TTEEEEEEEETTE---EEEEEECTTTCCEEEEEECCT----TCCEEEEEEET-TEEEEEESSSSEEEEEET
T ss_pred cceEEEE--CCEEEEECCCCCC---ceEEEEECCCCcEEEEEecCC----ccceeEEEEeC-CEEEEEEeeCCEEEEEEC
Confidence 3899998 5799998765421 579999999999886666521 23445677763 489999999999999999
Q ss_pred CC-cEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccC-CcCCCCCCeEEE
Q 039428 183 EG-QLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRG-GSSLSLGDGLAL 259 (335)
Q Consensus 183 ~g-~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g-~~~~~~pdGia~ 259 (335)
+. +.+..+ .- .+.|..+++|| .||++|. +++|+.+|+.+.+ ....+.+.. +..+..+..+.+
T Consensus 115 ~t~~~~~ti-----~~--------~~eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~-v~~~I~V~~~g~~~~~lNELe~ 179 (262)
T 3nol_A 115 RNLRQVRSF-----NY--------DGEGWGLTHNDQYLIMSDG-TPVLRFLDPESLT-PVRTITVTAHGEELPELNELEW 179 (262)
T ss_dssp TTCCEEEEE-----EC--------SSCCCCEEECSSCEEECCS-SSEEEEECTTTCS-EEEEEECEETTEECCCEEEEEE
T ss_pred ccCcEEEEE-----EC--------CCCceEEecCCCEEEEECC-CCeEEEEcCCCCe-EEEEEEeccCCccccccceeEE
Confidence 74 444322 21 12444444566 9999984 8999999999875 566665521 132344556787
Q ss_pred cCCCcEEEEecCCCeEEEEEcCCCcEEEEEeee-e------cCCCCCcceEEEEe--CCeEEEEe
Q 039428 260 LSPTKLVVAGNPYPSARLVESSDGWETASVVAK-F------NGPTHRVATAATVK--DGRVYLSH 315 (335)
Q Consensus 260 d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~-~------~~p~~~~Pt~va~~--~g~lyV~~ 315 (335)
. +|.+|+..+.++.+.+++...+-....+.-. + ..+....|.++|++ .++|||+-
T Consensus 180 ~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 180 V-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp E-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred E-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 6 7899999887788999988766333332211 1 11234578899996 78999975
No 88
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.53 E-value=7.7e-12 Score=113.25 Aligned_cols=234 Identities=12% Similarity=0.129 Sum_probs=144.1
Q ss_pred ceeeeEEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 50 LCETAKWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
.|.+++|+++|+.+|++ ..++.|..||..++.. ......+ .. ...+.++++++++..+|++.... .
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~----~~~~~~~--~~--~~~~~~~~~s~dg~~l~~~~~~~-----~ 151 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP----VGVVDVV--EG--LDGCHSANISPDNRTLWVPALKQ-----D 151 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE----EEEEEEE--CC--CTTBCCCEECTTSSEEEEEEGGG-----T
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc----ccccccc--cC--CCCceEEEECCCCCEEEEecCCC-----C
Confidence 68999999999977777 5578899998532220 1111121 21 13578999998555788854111 3
Q ss_pred eEEEEECCC-CeEEEEe--ecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCC---cEE--EEecCCcccccc
Q 039428 129 ALAAYDLST-WKRLFLT--QLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEG---QLL--SIIRSPLFTAKE 199 (335)
Q Consensus 129 ~v~~~d~~~-~~~~~~~--~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g---~~~--~~~~~~~~~~~~ 199 (335)
.|.+||.++ +++.... ..... ....|.+++++|+|+ +|+++...+.|..++.+. +.. ..+.. + +.
T Consensus 152 ~v~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~--~--~~ 225 (343)
T 1ri6_A 152 RICLFTVSDDGHLVAQDPAEVTTV--EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDM--M--PE 225 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECS--TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEEC--S--CT
T ss_pred EEEEEEecCCCceeeecccccccC--CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccc--c--Cc
Confidence 599999886 6554221 11111 135788999999996 899988889999998742 221 11110 1 10
Q ss_pred ccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEe-ccCCcCCCCCCeEEEcCCCc-EEEEecCCCeEE
Q 039428 200 WYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIE-LRGGSSLSLGDGLALLSPTK-LVVAGNPYPSAR 276 (335)
Q Consensus 200 ~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~-~~g~~~~~~pdGia~d~~g~-l~va~~~~~~~~ 276 (335)
.......+.+++++||| .||++...+++|.+++++...+..+.+. ... . ..|.+++++++|+ ||+++...+.+.
T Consensus 226 ~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~-~--~~~~~~~~s~dg~~l~~~~~~~~~v~ 302 (343)
T 1ri6_A 226 NFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT-E--TQPRGFNVDHSGKYLIAAGQKSHHIS 302 (343)
T ss_dssp TCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC-S--SSCCCEEECTTSSEEEEECTTTCEEE
T ss_pred cccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC-C--CccceEEECCCCCEEEEecCCCCeEE
Confidence 00112346689999999 8999998999999999873110222221 111 1 2389999999986 777765557777
Q ss_pred EEEcCCCcEEEEEeeeecCCCCCcceEEEEe
Q 039428 277 LVESSDGWETASVVAKFNGPTHRVATAATVK 307 (335)
Q Consensus 277 v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~ 307 (335)
+++.+......+.+..+. ....|.++++.
T Consensus 303 v~~~d~~~g~~~~~~~~~--~g~~p~~i~~~ 331 (343)
T 1ri6_A 303 VYEIVGEQGLLHEKGRYA--VGQGPMWVVVN 331 (343)
T ss_dssp EEEEETTTTEEEEEEEEE--CSSSCCEEEEE
T ss_pred EEEEcCCCceeeEccccc--cCCCCeeEEEE
Confidence 775432210123333443 24568888884
No 89
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.53 E-value=2e-12 Score=120.88 Aligned_cols=230 Identities=14% Similarity=0.093 Sum_probs=139.5
Q ss_pred CcceeeeEEcCCCCEEEEEe----------cCCeEEEEECCCCCCCcceeeeeEEeecCC----cCCCCcceEEEeCCCC
Q 039428 48 SFLCETAKWDDVGRRFLVSF----------LDGGVGQVLVPDEYSPGTVLEEVKLVKEDD----VVGNATMGIAVDRPRN 113 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~----------~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~----~~~~~p~Gi~~d~~~g 113 (335)
+..|. ++++|+|+.+|++. .++.|.+||..+.+ ++.+ +..+. ..+..|.++++++++.
T Consensus 78 G~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~----v~~~---I~v~~g~r~~~g~~P~~~a~spDGk 149 (386)
T 3sjl_D 78 GFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL----PTAD---IELPDAPRFLVGTYPWMTSLTPDGK 149 (386)
T ss_dssp CSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC----EEEE---EEETTCCCCCBSCCGGGEEECTTSS
T ss_pred CCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe----EEEE---EECCCccccccCCCCceEEEcCCCC
Confidence 44585 99999999888873 24679999965443 3332 22221 1234799999999777
Q ss_pred eEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCc-----------------------------------
Q 039428 114 RLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADD----------------------------------- 158 (335)
Q Consensus 114 ~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~----------------------------------- 158 (335)
++||++.... +.|.++|.++++++..++.++. ...+|.+
T Consensus 150 ~lyVan~~~~----~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~ 223 (386)
T 3sjl_D 150 TLLFYQFSPA----PAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPE 223 (386)
T ss_dssp EEEEEECSSS----CEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCT
T ss_pred EEEEEEcCCC----CeEEEEECCCCcEEEEEECCCc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccc
Confidence 8999754211 4599999998887644433110 0011111
Q ss_pred -------eeEC-CCCcE-EEEeCCCCeEEEEccCCcEEEEecCC-cccc----ccccccccccCeEEEccCC-eEEEEEC
Q 039428 159 -------IAVD-AEGNA-YVTDVVSSKIWKVGVEGQLLSIIRSP-LFTA----KEWYKNVFGLNGIVYHPDG-FLIVIHM 223 (335)
Q Consensus 159 -------~~vd-~~G~l-yV~d~~~~~I~~~d~~g~~~~~~~~~-~~~~----~~~~~~~~~p~Gia~~~dg-~Lyvad~ 223 (335)
.+++ ++|++ |+++ .++|+.+|..+....+...- .|.. +++.+ .+...+++++++ +|||+..
T Consensus 224 ~~~~~~~~~~~~~dG~~~~vs~--~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p--~g~q~~a~~~~~~~lyV~~~ 299 (386)
T 3sjl_D 224 DEFLINHPAYSQKAGRLVWPTY--TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRP--GGWQQVAYHRALDRIYLLVD 299 (386)
T ss_dssp TSCBCSCCEEETTTTEEEEEBT--TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEE--CSSSCEEEETTTTEEEEEEE
T ss_pred cccccccceeEcCCCcEEEEeC--CCEEEEEECCCCcceeecceeccccccccccccC--CCcceeeECCCCCeEEEEec
Confidence 2222 45543 3332 45677776654432221110 0110 11111 123348889988 9999864
Q ss_pred ---------CCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc--EEEEecCCCeEEEEEcCCCcEEEEEeee
Q 039428 224 ---------CSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK--LVVAGNPYPSARLVESSDGWETASVVAK 292 (335)
Q Consensus 224 ---------~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~--l~va~~~~~~~~v~~~~~~~~~~~~~~~ 292 (335)
..++|++||+.+.+ .+..+.+.. .|++|++++||+ ||+++..++.+.|++...+ +.+.+
T Consensus 300 ~~~~~~hk~~~~~V~viD~~t~k-v~~~i~vg~-----~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~----k~~~~ 369 (386)
T 3sjl_D 300 QRDEWRHKTASRFVVVLDAKTGE-RLAKFEMGH-----EIDSINVSQDEKPLLYALSTGDKTLYIHDAESG----EELRS 369 (386)
T ss_dssp ECCTTCTTSCEEEEEEEETTTCC-EEEEEEEEE-----EECEEEECSSSSCEEEEEETTTTEEEEEETTTC----CEEEE
T ss_pred cccccccCCCCCEEEEEECCCCe-EEEEEECCC-----CcceEEECCCCCeEEEEEcCCCCeEEEEECCCC----cEEEE
Confidence 24789999999986 667777632 389999999985 7888877789999998755 34444
Q ss_pred ecCCCCCcceEEEEe
Q 039428 293 FNGPTHRVATAATVK 307 (335)
Q Consensus 293 ~~~p~~~~Pt~va~~ 307 (335)
+..+ ..|..+++.
T Consensus 370 i~~~--~~p~~l~~s 382 (386)
T 3sjl_D 370 VNQL--GHGPQVITT 382 (386)
T ss_dssp ECCC--CSSCCEEEE
T ss_pred ecCC--CCCceeEEC
Confidence 4333 335566653
No 90
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.53 E-value=6.2e-13 Score=124.00 Aligned_cols=229 Identities=12% Similarity=-0.004 Sum_probs=138.5
Q ss_pred CcceeeeEEcCCCCEEEEEe----------cCCeEEEEECCCCCCCcceeeeeEEeecCC----cCCCCcceEEEeCCCC
Q 039428 48 SFLCETAKWDDVGRRFLVSF----------LDGGVGQVLVPDEYSPGTVLEEVKLVKEDD----VVGNATMGIAVDRPRN 113 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~----------~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~----~~~~~p~Gi~~d~~~g 113 (335)
+..| +++++|+|+.+|++. .++.|.+||..+.+ ++. .+..++ ..+..|.+++++|++.
T Consensus 65 G~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~----vv~---~I~v~~~~~~~~g~~P~~ia~SpDGk 136 (368)
T 1mda_H 65 AFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL----PIA---DIELPDAPRFSVGPRVHIIGNCASSA 136 (368)
T ss_dssp CTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC----EEE---EEEETTSCSCCBSCCTTSEEECTTSS
T ss_pred CCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC----EEE---EEECCCccccccCCCcceEEEcCCCC
Confidence 4468 999999999888884 25789999975444 233 222221 1124699999999778
Q ss_pred eEEEEEecCCCCccceEEE--EECCCCeEEEEeecCCC--------------------------------cc--------
Q 039428 114 RLLVAFTDVLGNKYSALAA--YDLSTWKRLFLTQLSGK--------------------------------SE-------- 151 (335)
Q Consensus 114 ~l~v~~~D~~~~~~~~v~~--~d~~~~~~~~~~~~~~~--------------------------------~~-------- 151 (335)
.+||++.... +.|.+ +|+++ ...++.++. ++
T Consensus 137 ~lyVan~~~~----~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~ 209 (368)
T 1mda_H 137 CLLFFLFGSS----AAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGA 209 (368)
T ss_dssp CEEEEECSSS----CEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTT
T ss_pred EEEEEccCCC----CeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeee
Confidence 9999764211 34666 77765 111111100 00
Q ss_pred --CCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCe---EEEccCC-eEEEEEC--
Q 039428 152 --EKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNG---IVYHPDG-FLIVIHM-- 223 (335)
Q Consensus 152 --~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~G---ia~~~dg-~Lyvad~-- 223 (335)
-...|. +...++.+|++.. +.|+.+|..+....++..-.+...........|.| +++++|| ++||+..
T Consensus 210 i~vg~~P~--~~~~~~~~~~vs~--~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~ 285 (368)
T 1mda_H 210 QNCSSQAA--QANYPGMLVWAVA--SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEH 285 (368)
T ss_dssp SCBCSCCE--EETTTTEEEECBS--SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEEC
T ss_pred eeCCCCcc--ccccCCEEEEEcC--CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccc
Confidence 001111 2222234444444 77888887643222221101110000112234566 8999998 9999865
Q ss_pred -C-----CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEec-CCCeEEEEEcCCCcEEEEEeeeecC
Q 039428 224 -C-----SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGN-PYPSARLVESSDGWETASVVAKFNG 295 (335)
Q Consensus 224 -~-----~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~-~~~~~~v~~~~~~~~~~~~~~~~~~ 295 (335)
. .+.+.+||+...+ .+..+.+.+ .|+||+++++|+ +|++++ +++.+.|++.... +++.++
T Consensus 286 ~~~~~~~~~~~~ViD~~t~~-vv~~i~vg~-----~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~----kvv~~I-- 353 (368)
T 1mda_H 286 SRSCLAAAENTSSVTASVGQ-TSGPISNGH-----DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD----QDQSSV-- 353 (368)
T ss_dssp SSCTTSCEEEEEEEESSSCC-EEECCEEEE-----EECEEEECCSSSCEEEEEETTTTEEEEEESSSC----EEEEEC--
T ss_pred cCcccccCCCEEEEECCCCe-EEEEEECCC-----CcceEEECCCCCEEEEEccCCCCeEEEEECCCC----cEEEEE--
Confidence 3 3467799999875 555665432 399999999985 899977 6899999998654 455555
Q ss_pred CCCCcceEEEEe
Q 039428 296 PTHRVATAATVK 307 (335)
Q Consensus 296 p~~~~Pt~va~~ 307 (335)
+.+..|.+++++
T Consensus 354 ~vg~~P~~i~~~ 365 (368)
T 1mda_H 354 ELDKGPESLSVQ 365 (368)
T ss_dssp CCCSCCCEEECC
T ss_pred ECCCCCCEEEee
Confidence 455668888875
No 91
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.53 E-value=3.4e-12 Score=116.88 Aligned_cols=190 Identities=15% Similarity=0.169 Sum_probs=128.5
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecC-CcCCCCcceEEEeCCCCeEEEEEecCC-CCcc
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKED-DVVGNATMGIAVDRPRNRLLVAFTDVL-GNKY 127 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~-~~~~~~p~Gi~~d~~~g~l~v~~~D~~-~~~~ 127 (335)
.+.+++++++|++|+.+ ...|+++|..+++ +. .+...+ ....+.++++++|+ +|++|++..+.. ....
T Consensus 91 ~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~-----~~--~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~ 160 (326)
T 2ghs_A 91 MGSALAKISDSKQLIAS--DDGLFLRDTATGV-----LT--LHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGA 160 (326)
T ss_dssp CEEEEEEEETTEEEEEE--TTEEEEEETTTCC-----EE--EEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTC
T ss_pred cceEEEEeCCCeEEEEE--CCCEEEEECCCCc-----EE--EEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCc
Confidence 57899999999887765 4569999965454 22 122211 11124678999997 789999653211 0111
Q ss_pred ceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccC---C-cEE--EEecCCccccccc
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVE---G-QLL--SIIRSPLFTAKEW 200 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~---g-~~~--~~~~~~~~~~~~~ 200 (335)
..|+++| +++...... ....|++++++++|+ +|++++..++|++++.+ | +.. +.+. .+..
T Consensus 161 ~~l~~~~--~g~~~~~~~------~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~--~~~~--- 227 (326)
T 2ghs_A 161 GSIYHVA--KGKVTKLFA------DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFI--DSTG--- 227 (326)
T ss_dssp EEEEEEE--TTEEEEEEE------EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEE--ECTT---
T ss_pred eEEEEEe--CCcEEEeeC------CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEE--ECCC---
Confidence 4699999 465542221 135688999999995 99999999999999974 4 210 1110 0110
Q ss_pred cccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEc-CCC-cEEEEec
Q 039428 201 YKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALL-SPT-KLVVAGN 270 (335)
Q Consensus 201 ~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d-~~g-~l~va~~ 270 (335)
....|+|++++++|+||++...+++|+++++++. ....+..+. ..|.+++++ +++ .||++..
T Consensus 228 --~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~--~~~~i~~~~----~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 228 --IKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGN--HIARYEVPG----KQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp --SSSEEEEEEECTTSCEEEEEETTTEEEEECTTCC--EEEEEECSC----SBEEEEEEESTTSCEEEEEEB
T ss_pred --CCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCC--EEEEEECCC----CCcEEEEEecCCCCEEEEEec
Confidence 1234899999999999999988899999999655 556666433 248899998 664 6999865
No 92
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=99.50 E-value=4.2e-12 Score=118.01 Aligned_cols=254 Identities=18% Similarity=0.187 Sum_probs=162.4
Q ss_pred CcceeeeEEc-CCCCEEEEE-ec-C---CeEEEEECCCC-----CCCcceeeeeEEeecCCc---C-CCCcceEEEeCCC
Q 039428 48 SFLCETAKWD-DVGRRFLVS-FL-D---GGVGQVLVPDE-----YSPGTVLEEVKLVKEDDV---V-GNATMGIAVDRPR 112 (335)
Q Consensus 48 ~~~pegia~d-~~g~~~~~~-~~-~---~~I~~~d~~~g-----~~~~~v~~~~~~~~~~~~---~-~~~p~Gi~~d~~~ 112 (335)
...|-|+++| .+|++|+.- .+ . -++.+++.... ..| + + +...|.. . -.++.++.+|+ .
T Consensus 25 n~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p-~-l----l~PYP~w~~~~~lvsV~~v~iD~-~ 97 (381)
T 3q6k_A 25 NMISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHS-P-L----LNKFSGHKTGKELTSIYQPVIDD-C 97 (381)
T ss_dssp GCCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSS-C-C----BEECTTCSSSCSSSCEEEEEECT-T
T ss_pred ccceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCc-c-c----ccCCCCCccccceEEeeEEEEcC-C
Confidence 4478999995 777655444 33 2 36888863210 011 0 1 0122321 1 14689999996 9
Q ss_pred CeEEEEEecCC--C----------CccceEEEEECCCC--eEEEEeecCCC-ccCCCCCCceeEC-C-------CCcEEE
Q 039428 113 NRLLVAFTDVL--G----------NKYSALAAYDLSTW--KRLFLTQLSGK-SEEKSTADDIAVD-A-------EGNAYV 169 (335)
Q Consensus 113 g~l~v~~~D~~--~----------~~~~~v~~~d~~~~--~~~~~~~~~~~-~~~~~~p~~~~vd-~-------~G~lyV 169 (335)
++|||. |++ + ....+|+.||++++ +++..+.++.. ..+.++.++++|| . ++.+|+
T Consensus 98 ~rLWVL--DtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYI 175 (381)
T 3q6k_A 98 RRLWVV--DIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYI 175 (381)
T ss_dssp CEEEEE--ECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEE
T ss_pred CcEEEE--eCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEE
Confidence 999995 544 1 12357999999999 88877777432 1224788999999 2 467999
Q ss_pred EeCCCCeEEEEccCCcEEEEecCCccccccc------cc----cccccCeEEEccC----C-eEEEEECCCCEEEEEeCC
Q 039428 170 TDVVSSKIWKVGVEGQLLSIIRSPLFTAKEW------YK----NVFGLNGIVYHPD----G-FLIVIHMCSGNLFKIDIR 234 (335)
Q Consensus 170 ~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~------~~----~~~~p~Gia~~~d----g-~Lyvad~~~~~v~~~d~~ 234 (335)
+|+..+.|.++|........+.+..|. |+. .+ -..+..||+++|+ + .||+....+.+++++..+
T Consensus 176 tD~~~~gLIVydl~~~~swRv~~~~~~-pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~ 254 (381)
T 3q6k_A 176 TNFLRGALFIYDHKKQDSWNVTHPTFK-AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTK 254 (381)
T ss_dssp EETTTTEEEEEETTTTEEEEEECGGGS-CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHH
T ss_pred EcCCCCcEEEEECCCCcEEEEccCCCc-cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHH
Confidence 999999999999875444333332232 210 00 1247999999997 5 899999999999999843
Q ss_pred ---CCc--eeEEEEeccCCcCCCCCC--eEEEc-CCCcEEEEecCCCeEEEEEcCC-CcE--EEEEeeeecCCCCCcceE
Q 039428 235 ---KEE--EEVKLIELRGGSSLSLGD--GLALL-SPTKLVVAGNPYPSARLVESSD-GWE--TASVVAKFNGPTHRVATA 303 (335)
Q Consensus 235 ---~~~--~~~~~~~~~g~~~~~~pd--Gia~d-~~g~l~va~~~~~~~~v~~~~~-~~~--~~~~~~~~~~p~~~~Pt~ 303 (335)
.+. ..++.+...+ ...+ ++++| .+|+||++.-..++|.+..... .+. ..+++. ..+...+|++
T Consensus 255 ~L~~~~~~~~v~~~G~kg----~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~--~d~~l~~pd~ 328 (381)
T 3q6k_A 255 ELKQKGGKLNPELLGNRG----KYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVY--TSSRFVFGTD 328 (381)
T ss_dssp HHSSTTCCCCCEEEEECC----TTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEE--ECTTCCSEEE
T ss_pred HhhCcchhhceEEeeecC----CCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEE--ECCCccccCe
Confidence 211 1233332111 1235 56776 7899999977667787777654 331 112222 2467889999
Q ss_pred EEEe-CCeEEE-Eecc
Q 039428 304 ATVK-DGRVYL-SHLL 317 (335)
Q Consensus 304 va~~-~g~lyV-~~~~ 317 (335)
+.++ +|+||| ++++
T Consensus 329 ~~i~~~g~Lwv~sn~l 344 (381)
T 3q6k_A 329 ISVDSKGGLWFMSNGF 344 (381)
T ss_dssp EEECTTSCEEEEECSC
T ss_pred EEECCCCeEEEEECcc
Confidence 9996 899999 4443
No 93
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.50 E-value=2.8e-11 Score=111.42 Aligned_cols=211 Identities=13% Similarity=0.153 Sum_probs=128.2
Q ss_pred CcceeeeEEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCc-------CCCCcceEEEeCCCCeEEEEE
Q 039428 48 SFLCETAKWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDV-------VGNATMGIAVDRPRNRLLVAF 119 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~-------~~~~p~Gi~~d~~~g~l~v~~ 119 (335)
...|..+++ +|+.+|++ ..+++|..++........+ +. ......+. ....+++++++|++..||++
T Consensus 99 ~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~-~~--~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~- 172 (361)
T 3scy_A 99 GADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLP-AS--DVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLAD- 172 (361)
T ss_dssp SSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCS-CS--EEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEE-
T ss_pred CCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcc-cc--eeEEccCCCCCccccCCCcceEEEECCCCCEEEEE-
Confidence 456888888 67766666 5678898888532221000 00 01111110 01235889999844458884
Q ss_pred ecCCCCccceEEEEECC--CC----e-EEE-----EeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCCcE
Q 039428 120 TDVLGNKYSALAAYDLS--TW----K-RLF-----LTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEGQL 186 (335)
Q Consensus 120 ~D~~~~~~~~v~~~d~~--~~----~-~~~-----~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g~~ 186 (335)
+... ..|.+|+.+ ++ + +.. ..... ....|+.++++|+|+ +|+++...+.|.+++.++..
T Consensus 173 -~~~~---~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~ 244 (361)
T 3scy_A 173 -DLGT---DQIHKFNINPNANADNKEKFLTKGTPEAFKVA----PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM 244 (361)
T ss_dssp -ETTT---TEEEEEEECTTCCTTTCCCCEEEEEEEEEECC----TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE
T ss_pred -eCCC---CEEEEEEEcCCCCcccccceeecccccceecC----CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc
Confidence 3322 347777654 33 2 211 11221 145788999999996 99999888999999976443
Q ss_pred EEEecCCccccccccccccccCeEEEccCC-eEEEEECC-CCEEEEEeCC--CCc-eeEEEEeccCCcCCCCCCeEEEcC
Q 039428 187 LSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMC-SGNLFKIDIR--KEE-EEVKLIELRGGSSLSLGDGLALLS 261 (335)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~-~~~v~~~d~~--~~~-~~~~~~~~~g~~~~~~pdGia~d~ 261 (335)
...+.. +.. .......|.+++++||| +||+++.. .++|..++++ .++ .....+.. + ..|.++++++
T Consensus 245 ~~~~~~--~~~--~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g----~~~~~~~~sp 315 (361)
T 3scy_A 245 LDEIQT--VAA--DTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-G----IHPRNFIITP 315 (361)
T ss_dssp EEEEEE--EES--CSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-S----SCCCEEEECT
T ss_pred eEEeEE--Eec--CCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-C----CCCceEEECC
Confidence 322211 000 01123457899999999 79999988 8888877765 331 01222332 2 3589999999
Q ss_pred CCc-EEEEecCCCeEEEEEcC
Q 039428 262 PTK-LVVAGNPYPSARLVESS 281 (335)
Q Consensus 262 ~g~-l~va~~~~~~~~v~~~~ 281 (335)
+|+ ||+++..++.+.+++.+
T Consensus 316 dg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 316 NGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp TSCEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEECCCCCEEEEEEE
Confidence 996 88887656778885544
No 94
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.49 E-value=1.4e-11 Score=118.05 Aligned_cols=176 Identities=13% Similarity=0.189 Sum_probs=110.4
Q ss_pred cCCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcC-----CCCcceEEEeCC---CCeEE
Q 039428 45 HSPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVV-----GNATMGIAVDRP---RNRLL 116 (335)
Q Consensus 45 ~~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~-----~~~p~Gi~~d~~---~g~l~ 116 (335)
...-..|.+++++++|++|++....++|+++++.++. .. .+...+... ...+.||+++|+ ++.||
T Consensus 23 a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~-----~~--~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lY 95 (454)
T 1cru_A 23 LSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGS-----VK--TVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIY 95 (454)
T ss_dssp ECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC-----EE--EEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEE
T ss_pred ECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCc-----Ee--EEecCCccccccCCCCceeEEEECCCcCcCCEEE
Confidence 3344579999999999988777656789999754444 12 122223211 145779999986 89999
Q ss_pred EEEecCC----CC---ccceEEEEECCCC--eE---E-EEeecCCCccCCCCCCceeECCCCcEEEEeC-----------
Q 039428 117 VAFTDVL----GN---KYSALAAYDLSTW--KR---L-FLTQLSGKSEEKSTADDIAVDAEGNAYVTDV----------- 172 (335)
Q Consensus 117 v~~~D~~----~~---~~~~v~~~d~~~~--~~---~-~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~----------- 172 (335)
++..... +. ..++|++++.+.+ .+ . ....++. ...+.+++|++++||+|||+..
T Consensus 96 v~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~--~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~ 173 (454)
T 1cru_A 96 ISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS--SKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLF 173 (454)
T ss_dssp EEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC--CSSCCEEEEEECTTSCEEEEECCTTTTSGGGTT
T ss_pred EEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC--CCCCCCCeEeECCCCeEEEEECCCCCCCccccc
Confidence 9764210 00 0257999886432 22 1 1112321 2257789999999999999832
Q ss_pred ---------------------CCCeEEEEccCCcEEEEecCCccc---ccc-ccccccccCeEEEccCCeEEEEECCCC-
Q 039428 173 ---------------------VSSKIWKVGVEGQLLSIIRSPLFT---AKE-WYKNVFGLNGIVYHPDGFLIVIHMCSG- 226 (335)
Q Consensus 173 ---------------------~~~~I~~~d~~g~~~~~~~~~~~~---~~~-~~~~~~~p~Gia~~~dg~Lyvad~~~~- 226 (335)
..++|+|++++|+... +++ |. .++ ......+|.|++++++|.||+++.+.+
T Consensus 174 ~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~--~Np-f~~~~~~ei~a~G~RNp~gla~dp~G~L~~~d~g~~~ 250 (454)
T 1cru_A 174 LPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPK--DNP-SFNGVVSHIYTLGHRNPQGLAFTPNGKLLQSEQGPNS 250 (454)
T ss_dssp SCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCT--TCC-EETTEECSEEEBCCSEEEEEEECTTSCEEEEEECSSS
T ss_pred cccccccccccccccccCCCCCCeeEEEEeCCCCCCC--CCC-CCCCCcceEEEECCCCcceEEECCCCCEEEEecCCCC
Confidence 1478999999986210 000 00 000 112356799999999999999997543
Q ss_pred --EEEEEe
Q 039428 227 --NLFKID 232 (335)
Q Consensus 227 --~v~~~d 232 (335)
.|.++.
T Consensus 251 ~dein~i~ 258 (454)
T 1cru_A 251 DDEINLIV 258 (454)
T ss_dssp CEEEEECC
T ss_pred CeEEEEec
Confidence 455443
No 95
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.49 E-value=3.2e-11 Score=118.28 Aligned_cols=231 Identities=13% Similarity=0.140 Sum_probs=155.4
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEEC--CCCCCCcceeeeeEEeecCCcCCCCcceEEEeC----CCCeEEEEEecCC
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLV--PDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDR----PRNRLLVAFTDVL 123 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~--~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~----~~g~l~v~~~D~~ 123 (335)
.|.+++++|+|+.+|+...+++|..||. .+++ ++. .+. .+..|.++++++ ++..+|+++...
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~----~~~---~i~----~g~~p~~va~sp~~~~dg~~l~v~~~~~- 247 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPT----KVA---EIK----IGIEARSVESSKFKGYEDRYTIAGAYWP- 247 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCE----EEE---EEE----CCSEEEEEEECCSTTCTTTEEEEEEEES-
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCc----EEE---EEe----cCCCcceEEeCCCcCCCCCEEEEEEccC-
Confidence 3899999999999999866799999996 3332 122 221 134689999998 788899975422
Q ss_pred CCccceEEEEECCCCeEEEEeecCCC---c---cCCCCCCceeECCCC-cEEEEeCCCCeEEEEccCCc-EEE--EecCC
Q 039428 124 GNKYSALAAYDLSTWKRLFLTQLSGK---S---EEKSTADDIAVDAEG-NAYVTDVVSSKIWKVGVEGQ-LLS--IIRSP 193 (335)
Q Consensus 124 ~~~~~~v~~~d~~~~~~~~~~~~~~~---~---~~~~~p~~~~vd~~G-~lyV~d~~~~~I~~~d~~g~-~~~--~~~~~ 193 (335)
+.|.+||..+++.+..+...+. . .+...+..++++++| .+|++....+.|+.+|.... ... .+.
T Consensus 248 ----~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-- 321 (543)
T 1nir_A 248 ----PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-- 321 (543)
T ss_dssp ----SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE--
T ss_pred ----CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec--
Confidence 4699999999887755443210 0 012356789999975 68889999999999997642 111 111
Q ss_pred ccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCC-CeEEE-cCC-CcEEEEe
Q 039428 194 LFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLG-DGLAL-LSP-TKLVVAG 269 (335)
Q Consensus 194 ~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~p-dGia~-d~~-g~l~va~ 269 (335)
....|.+++++||| ++|+++..+++|.++|...++ ....+.. +.. +-| .|..+ +++ |.+|+++
T Consensus 322 ---------~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~-l~~~i~~-g~~--ph~g~g~~~~~p~~g~~~~s~ 388 (543)
T 1nir_A 322 ---------AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRR-LSALVDV-GKT--PHPGRGANFVHPKYGPVWSTS 388 (543)
T ss_dssp ---------CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTE-EEEEEEC-SSS--BCCTTCEEEEETTTEEEEEEE
T ss_pred ---------cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCe-EEEeecc-CCC--CCCCCCcccCCCCCccEEEec
Confidence 12348999999999 689999999999999999874 4455553 211 112 35554 566 7899986
Q ss_pred c-CCCeEEEEEcCCC------cEEEEEeeeecCCCCCcceEEEEe--CCeEEEEe
Q 039428 270 N-PYPSARLVESSDG------WETASVVAKFNGPTHRVATAATVK--DGRVYLSH 315 (335)
Q Consensus 270 ~-~~~~~~v~~~~~~------~~~~~~~~~~~~p~~~~Pt~va~~--~g~lyV~~ 315 (335)
. +.+.+.+++.+.. |+....+. .+. ..+..+++. +.+|||..
T Consensus 389 ~~~d~~V~v~d~~~~~~~~~~~~~v~~l~---~~g-~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 389 HLGDGSISLIGTDPKNHPQYAWKKVAELQ---GQG-GGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp BSSSSEEEEEECCTTTCTTTBTSEEEEEE---CSC-SCCCCEECCTTCCEEEECC
T ss_pred cCCCceEEEEEeCCCCCchhcCeEEEEEE---cCC-CCceEEEcCCCCCcEEEec
Confidence 4 4578999987651 55433332 221 112346663 67888855
No 96
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.49 E-value=2.2e-12 Score=113.67 Aligned_cols=184 Identities=12% Similarity=0.075 Sum_probs=126.9
Q ss_pred cceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEcc
Q 039428 103 TMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGV 182 (335)
Q Consensus 103 p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~ 182 (335)
.+||.++ +++||+++.+. ++|.++|+++++++... +.. ..+..|++++. +++|++++..+.++++|+
T Consensus 57 tqGL~~~--~~~Ly~stG~~-----g~v~~iD~~Tgkv~~~~-l~~----~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~ 123 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQ-----GTLRQLSLESAQPVWME-RLG----NIFAEGLASDG-ERLYQLTWTEGLLFTWSG 123 (268)
T ss_dssp EEEEEEE--TTEEEEEETTT-----TEEEECCSSCSSCSEEE-ECT----TCCEEEEEECS-SCEEEEESSSCEEEEEET
T ss_pred cceEEEE--CCEEEEEcCCC-----CEEEEEECCCCcEEeEE-CCC----CcceeEEEEeC-CEEEEEEccCCEEEEEEC
Confidence 4799998 58999976543 35999999999887555 421 23445688764 479999999999999998
Q ss_pred CCc-EEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccC-CcCCCCCCeEEE
Q 039428 183 EGQ-LLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRG-GSSLSLGDGLAL 259 (335)
Q Consensus 183 ~g~-~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g-~~~~~~pdGia~ 259 (335)
+.. .+..+ .-+ ....|++ +|| +||+++ ++++|+.+|+.+.+ ....+.+.. ...+..+..+.+
T Consensus 124 ~Tl~~~~ti-----~~~------~eGwGLt--~Dg~~L~vSd-Gs~~l~~iDp~T~~-v~~~I~V~~~g~~v~~lNeLe~ 188 (268)
T 3nok_A 124 MPPQRERTT-----RYS------GEGWGLC--YWNGKLVRSD-GGTMLTFHEPDGFA-LVGAVQVKLRGQPVELINELEC 188 (268)
T ss_dssp TTTEEEEEE-----ECS------SCCCCEE--EETTEEEEEC-SSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEE
T ss_pred CcCcEEEEE-----eCC------CceeEEe--cCCCEEEEEC-CCCEEEEEcCCCCe-EEEEEEeCCCCcccccccccEE
Confidence 753 33322 211 1134555 445 999999 59999999999875 556665422 122345667787
Q ss_pred cCCCcEEEEecCCCeEEEEEcCCCcEEEEEeee-e-------cCCCCCcceEEEEe--CCeEEEEe
Q 039428 260 LSPTKLVVAGNPYPSARLVESSDGWETASVVAK-F-------NGPTHRVATAATVK--DGRVYLSH 315 (335)
Q Consensus 260 d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~-~-------~~p~~~~Pt~va~~--~g~lyV~~ 315 (335)
. +|.+|+..+.++.+.+++...+-..+.+.-. + ..+....|.++|++ .++|||+-
T Consensus 189 ~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 189 A-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp E-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred e-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 6 7899999877788999998776433333211 1 11234568899996 78999974
No 97
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.48 E-value=1.8e-11 Score=120.03 Aligned_cols=200 Identities=14% Similarity=0.095 Sum_probs=138.0
Q ss_pred EEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEE
Q 039428 55 KWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYD 134 (335)
Q Consensus 55 a~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d 134 (335)
++++++.+|++...+++|.+||..+++ ++. .+.. +..++++++++++..||+++.| +.|.+||
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~----~~~---~i~~----g~~~~~v~~spdg~~l~v~~~d------~~V~v~D 206 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKK----IVK---VIDT----GYAVHISRMSASGRYLLVIGRD------ARIDMID 206 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCC----EEE---EEEC----STTEEEEEECTTSCEEEEEETT------SEEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCce----EEE---EEec----CcccceEEECCCCCEEEEECCC------CeEEEEE
Confidence 478887666555778999999965454 222 2221 2247899999977788986543 3599999
Q ss_pred C--CCCeEEEEeecCCCccCCCCCCceeECC----CCc-EEEEeCCCCeEEEEccCC-cEEEEecCCcccccc-cccccc
Q 039428 135 L--STWKRLFLTQLSGKSEEKSTADDIAVDA----EGN-AYVTDVVSSKIWKVGVEG-QLLSIIRSPLFTAKE-WYKNVF 205 (335)
Q Consensus 135 ~--~~~~~~~~~~~~~~~~~~~~p~~~~vd~----~G~-lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~~~~~-~~~~~~ 205 (335)
. ++++.+..+.. ...|..++++| ||+ +|+++...+.|..+|.+. +.+..+......... ......
T Consensus 207 ~~~~t~~~~~~i~~------g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~ 280 (543)
T 1nir_A 207 LWAKEPTKVAEIKI------GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEP 280 (543)
T ss_dssp TTSSSCEEEEEEEC------CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCC
T ss_pred CcCCCCcEEEEEec------CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCC
Confidence 9 77776644432 34688999999 985 899988889999999764 444333211000000 000012
Q ss_pred ccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEE--EEeccCCcCCCCCCeEEEcCCCc-EEEEecCCCeEEEEEcC
Q 039428 206 GLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVK--LIELRGGSSLSLGDGLALLSPTK-LVVAGNPYPSARLVESS 281 (335)
Q Consensus 206 ~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~--~~~~~g~~~~~~pdGia~d~~g~-l~va~~~~~~~~v~~~~ 281 (335)
.+.+|++++++ .+|++...+++|+.+|....+ ... .+.. + ..|.+++++++|+ +|+++..++.+.+++..
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~-~l~~~~i~~-~----~~~~~~~~spdg~~l~va~~~~~~v~v~D~~ 354 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKETGKVLLVNYKDID-NLTVTSIGA-A----PFLHDGGWDSSHRYFMTAANNSNKVAVIDSK 354 (543)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEECTTSS-SCEEEEEEC-C----SSCCCEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEECCCCeEEEEEecCCC-cceeEEecc-C----cCccCceECCCCCEEEEEecCCCeEEEEECC
Confidence 46789999987 899999999999999998753 222 3432 2 3489999999997 67777767889999887
Q ss_pred CC
Q 039428 282 DG 283 (335)
Q Consensus 282 ~~ 283 (335)
.+
T Consensus 355 tg 356 (543)
T 1nir_A 355 DR 356 (543)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 98
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.45 E-value=9.9e-12 Score=117.87 Aligned_cols=239 Identities=13% Similarity=0.079 Sum_probs=136.0
Q ss_pred CCCCEEEEE-ecC----CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCC----CCccc
Q 039428 58 DVGRRFLVS-FLD----GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVL----GNKYS 128 (335)
Q Consensus 58 ~~g~~~~~~-~~~----~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~----~~~~~ 128 (335)
++++.+|++ ... ++|.++|..+.+ ++. .+. .+..| ||++++++..+||++.... +...+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~----vv~---~I~----vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~ 149 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGR----ILG---MTD----GGFLP-HPVAAEDGSFFAQASTVFERIARGKRTD 149 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTE----EEE---EEE----ECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCE----EEE---EEE----CCCCC-ceEECCCCCEEEEEeccccccccCCCCC
Confidence 566767776 433 799999965443 333 221 12468 9999998889999763110 00114
Q ss_pred eEEEEECCCCeEEEEeecCCCcc--CCCCCCceeECCCC-cEEEEeCC-CCeEEEEccCCcEE-EEecCCcc--ccccc-
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSE--EKSTADDIAVDAEG-NAYVTDVV-SSKIWKVGVEGQLL-SIIRSPLF--TAKEW- 200 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~--~~~~p~~~~vd~~G-~lyV~d~~-~~~I~~~d~~g~~~-~~~~~~~~--~~~~~- 200 (335)
.|.+||+.++++...+.+.+... ....|.++++++|| .+||++.. .+.|.++|.....+ ..+..+.. ..|..
T Consensus 150 ~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~ 229 (426)
T 3c75_H 150 YVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASP 229 (426)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEET
T ss_pred EEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCC
Confidence 69999999998876665531111 12579999999998 59999875 78999999876433 22221100 00000
Q ss_pred -----------------------------ccccccc--CeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEE---ec
Q 039428 201 -----------------------------YKNVFGL--NGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLI---EL 245 (335)
Q Consensus 201 -----------------------------~~~~~~p--~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~---~~ 245 (335)
......| ..+++++++ .+|+.. ..++|+++|..+. ....+ ..
T Consensus 230 ~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s-~~g~V~ViD~~~~--~~~v~~~~~~ 306 (426)
T 3c75_H 230 TVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPT-YTGKIFQADLTAE--GATFRAPIEA 306 (426)
T ss_dssp TEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEB-TTSEEEEEEECSS--CEEECCCEES
T ss_pred cEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEe-CCCcEEEEeccCC--ceEEeeeeee
Confidence 0000001 123445554 444443 2456777776554 22221 11
Q ss_pred cCCcC--C-CCCCe---EEEcCCC-cEEEEec---------CCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe--
Q 039428 246 RGGSS--L-SLGDG---LALLSPT-KLVVAGN---------PYPSARLVESSDGWETASVVAKFNGPTHRVATAATVK-- 307 (335)
Q Consensus 246 ~g~~~--~-~~pdG---ia~d~~g-~l~va~~---------~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~-- 307 (335)
..... . ..|.| ++++++| ++||++. +++.+.|++.... +++.++. ....|.++++.
T Consensus 307 ~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~----kvv~~I~--vg~~P~gia~spD 380 (426)
T 3c75_H 307 LTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG----ERINKIE--LGHEIDSINVSQD 380 (426)
T ss_dssp SCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC----CEEEEEE--EEEEECEEEECCS
T ss_pred ccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC----eEEEEEE--CCCCcCeEEEccC
Confidence 00000 0 12555 8999985 7999953 2357999987654 3333432 22347899995
Q ss_pred CC-eEEEEecc
Q 039428 308 DG-RVYLSHLL 317 (335)
Q Consensus 308 ~g-~lyV~~~~ 317 (335)
+. ++|++.+.
T Consensus 381 g~~~lyv~n~~ 391 (426)
T 3c75_H 381 AEPLLYALSAG 391 (426)
T ss_dssp SSCEEEEEETT
T ss_pred CCEEEEEEcCC
Confidence 44 57776643
No 99
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.45 E-value=1e-10 Score=108.38 Aligned_cols=195 Identities=16% Similarity=0.218 Sum_probs=140.7
Q ss_pred ceeeeEEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 50 LCETAKWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
.+.+++|+++|+.++++ ..++.|+++|..+++ .+. .+... ..+.++++++++..+|++..+ . +
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~----~~~---~~~~~----~~~~~~~~s~dg~~l~~~~~~--~---~ 138 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT----VAG---TVKTG----KSPLGLALSPDGKKLYVTNNG--D---K 138 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE----EEE---EEECS----SSEEEEEECTTSSEEEEEETT--T---T
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCe----EEE---EEeCC----CCcceEEECCCCCEEEEEeCC--C---C
Confidence 68899999999977766 567999999965443 121 22222 357899999855567775321 1 4
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCCcEE-EEecCCccccccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEGQLL-SIIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g~~~-~~~~~~~~~~~~~~~~~~~ 206 (335)
.|..||.++++....... ...+..++++++|+ +|++....+.|+.+|...... ..+. ....
T Consensus 139 ~v~~~d~~~~~~~~~~~~------~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-----------~~~~ 201 (391)
T 1l0q_A 139 TVSVINTVTKAVINTVSV------GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-----------VEAA 201 (391)
T ss_dssp EEEEEETTTTEEEEEEEC------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-----------CSSE
T ss_pred EEEEEECCCCcEEEEEec------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-----------cCCC
Confidence 699999999887644433 24568899999985 788988899999999875443 2221 1124
Q ss_pred cCeEEEccCC-eEEEEEC--CCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEecCCCeEEEEEcCC
Q 039428 207 LNGIVYHPDG-FLIVIHM--CSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGNPYPSARLVESSD 282 (335)
Q Consensus 207 p~Gia~~~dg-~Lyvad~--~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~~~~~~~v~~~~~ 282 (335)
+.+++++|+| .||++.. .++.|+.+|+..++ ....+.. + ..|.+++++++|+ +|++....+.+++++...
T Consensus 202 ~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~-~~~~~~~-~----~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 202 PSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK-ITARIPV-G----PDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE-EEEEEEC-C----SSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred ccceEECCCCCEEEEEecCcCCCcEEEEECCCCe-EEEEEec-C----CCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 7899999999 7888876 68999999998763 4444543 2 2378999999985 778866557888888765
Q ss_pred C
Q 039428 283 G 283 (335)
Q Consensus 283 ~ 283 (335)
+
T Consensus 276 ~ 276 (391)
T 1l0q_A 276 N 276 (391)
T ss_dssp T
T ss_pred C
Confidence 5
No 100
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.45 E-value=8.3e-11 Score=111.08 Aligned_cols=258 Identities=10% Similarity=0.078 Sum_probs=162.1
Q ss_pred eEEEcCCCcceeeeEE-----------c--CCCCEEEEE-ecCCeEEEEECCCC-CCCcceeeeeEEeecCCc---CC-C
Q 039428 41 VYQYHSPSFLCETAKW-----------D--DVGRRFLVS-FLDGGVGQVLVPDE-YSPGTVLEEVKLVKEDDV---VG-N 101 (335)
Q Consensus 41 ~~~~~~~~~~pegia~-----------d--~~g~~~~~~-~~~~~I~~~d~~~g-~~~~~v~~~~~~~~~~~~---~~-~ 101 (335)
++.++..+..++...| . .+++.+|+. ..+++|+++|.... +.| ++. +.+...++ .+ .
T Consensus 63 ~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p-~~~---k~ie~~~~~~~~g~s 138 (462)
T 2ece_A 63 KVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREP-KII---KVIEPEEVKKVSGYS 138 (462)
T ss_dssp EEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSC-EEE---EEECHHHHHHHHCEE
T ss_pred EEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCc-eee---eeechhhcccccCCC
Confidence 3444444444555566 6 888888888 77899999995311 222 111 23320011 12 3
Q ss_pred CcceEEEeCCCCeEEEEEecC-CCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeC-------
Q 039428 102 ATMGIAVDRPRNRLLVAFTDV-LGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDV------- 172 (335)
Q Consensus 102 ~p~Gi~~d~~~g~l~v~~~D~-~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~------- 172 (335)
.|+++.+.| +| +||+..+. .+...+.|..+|.++++++....... .....+.|+.+.|+++ +|++++
T Consensus 139 ~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~--~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 139 RLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDR--GDQYLAYDFWWNLPNEVLVSSEWAVPNTIE 214 (462)
T ss_dssp EEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBC--TTCCCCCCEEEETTTTEEEECBCCCHHHHT
T ss_pred cccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCC--CCccccceEEECCCCCEEEEccCcCccccc
Confidence 789999997 66 99865432 12223679999999998886554321 1245677899999987 555552
Q ss_pred -----------CCCeEEEEccCCcEE-EEecCCccccccccccccccCeEEE--ccCC-eEEEEEC-----CCCEEEEEe
Q 039428 173 -----------VSSKIWKVGVEGQLL-SIIRSPLFTAKEWYKNVFGLNGIVY--HPDG-FLIVIHM-----CSGNLFKID 232 (335)
Q Consensus 173 -----------~~~~I~~~d~~g~~~-~~~~~~~~~~~~~~~~~~~p~Gia~--~~dg-~Lyvad~-----~~~~v~~~d 232 (335)
..++|.++|.+.... ..+.-+ .....|.+|.+ +|+| ++||+.. .+++|+++.
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg--------~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~ 286 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG--------EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWF 286 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC--------TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEE
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEecC--------CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEE
Confidence 479999999875432 222110 01245888877 9999 9999998 899998887
Q ss_pred CCCCc-eeEEEEeccCCc---C-----------CCCCCeEEEcCCC-cEEEEecCCCeEEEEEcCCCcEEEEEeeeecCC
Q 039428 233 IRKEE-EEVKLIELRGGS---S-----------LSLGDGLALLSPT-KLVVAGNPYPSARLVESSDGWETASVVAKFNGP 296 (335)
Q Consensus 233 ~~~~~-~~~~~~~~~g~~---~-----------~~~pdGia~d~~g-~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p 296 (335)
.+.++ ...+.+++.... . -..|.+|.+.+|| .|||++.+.+.+++++..+..+ .++.+.+...
T Consensus 287 ~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~-~~lv~~I~tG 365 (462)
T 2ece_A 287 YEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFK-PVLTGKVKLG 365 (462)
T ss_dssp EETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTS-CEEEEEEECB
T ss_pred ecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCC-cEEEEEEEeC
Confidence 76541 122333322110 0 1458999999998 5999999889999998653311 2233333211
Q ss_pred ---------CCC----cceEEEEe--CCeEEEEe
Q 039428 297 ---------THR----VATAATVK--DGRVYLSH 315 (335)
Q Consensus 297 ---------~~~----~Pt~va~~--~g~lyV~~ 315 (335)
.+. .|..+++. +.+|||++
T Consensus 366 G~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 366 GIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 011 47789994 77899977
No 101
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.45 E-value=2.7e-11 Score=107.01 Aligned_cols=203 Identities=12% Similarity=0.170 Sum_probs=129.8
Q ss_pred CCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCC
Q 039428 96 DDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSS 175 (335)
Q Consensus 96 ~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~ 175 (335)
+++. ..+.||++++++++||++. |.. ..|+++|++ +++.....+.+ ..-+.|++++++|.+||++...+
T Consensus 23 ~g~~-~~lSGla~~~~~~~L~aV~-d~~----~~I~~ld~~-g~v~~~i~l~g----~~D~EGIa~~~~g~~~vs~E~~~ 91 (255)
T 3qqz_A 23 AGIT-NNISSLTWSAQSNTLFSTI-NKP----AAIVEMTTN-GDLIRTIPLDF----VKDLETIEYIGDNQFVISDERDY 91 (255)
T ss_dssp TTCC-SCEEEEEEETTTTEEEEEE-ETT----EEEEEEETT-CCEEEEEECSS----CSSEEEEEECSTTEEEEEETTTT
T ss_pred CCcc-cCcceeEEeCCCCEEEEEE-CCC----CeEEEEeCC-CCEEEEEecCC----CCChHHeEEeCCCEEEEEECCCC
Confidence 4443 3589999998788999874 332 579999998 66765555522 46688999999999999998889
Q ss_pred eEEEEccC--CcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCC-EEEEEe--CCCCceeEEEEec---c
Q 039428 176 KIWKVGVE--GQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSG-NLFKID--IRKEEEEVKLIEL---R 246 (335)
Q Consensus 176 ~I~~~d~~--g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~-~v~~~d--~~~~~~~~~~~~~---~ 246 (335)
++++++.+ +.. ..+....+.. ...+.-.+..|||+++++ +||++..... .|++++ +.+. ....+.. .
T Consensus 92 ~l~~~~v~~~~~i-~~~~~~~~~~-~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~--~l~i~~~~~~~ 167 (255)
T 3qqz_A 92 AIYVISLTPNSEV-KILKKIKIPL-QESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSN--ELHISKDKALQ 167 (255)
T ss_dssp EEEEEEECTTCCE-EEEEEEECCC-SSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSS--CCEEEECHHHH
T ss_pred cEEEEEcCCCCee-eeeeeecccc-ccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCC--ceeeecchhhc
Confidence 99988644 431 1111111110 001123457999999988 9998876665 899998 2222 2333321 1
Q ss_pred CCcCCCCCCeEEEcCC-CcEEEEecCCCeEEEEEcCCCcEEEEEee---eecC--CCCCcceEEEEe-CCeEEEEe
Q 039428 247 GGSSLSLGDGLALLSP-TKLVVAGNPYPSARLVESSDGWETASVVA---KFNG--PTHRVATAATVK-DGRVYLSH 315 (335)
Q Consensus 247 g~~~~~~pdGia~d~~-g~l~va~~~~~~~~v~~~~~~~~~~~~~~---~~~~--p~~~~Pt~va~~-~g~lyV~~ 315 (335)
+...+..+.++++|+. |++|+....++.+.+++. .++...... ...+ ....+|.+||++ +|+|||++
T Consensus 168 ~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~--~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 168 RQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTL--VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp HTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECT--TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred cccccCCceeEEEcCCCCeEEEEECCCCeEEEEcC--CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 1122456899999987 689999775565555543 322211111 1110 135689999997 89999953
No 102
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.45 E-value=1e-10 Score=105.54 Aligned_cols=208 Identities=12% Similarity=0.014 Sum_probs=135.1
Q ss_pred ceeeeEEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCC--cCCCCcceEEEeCCCCeEEEEEecC----
Q 039428 50 LCETAKWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDD--VVGNATMGIAVDRPRNRLLVAFTDV---- 122 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~--~~~~~p~Gi~~d~~~g~l~v~~~D~---- 122 (335)
.|.+++++++|+.+|++ ..++.|+++|..+++ ++. .+..+. ..+..+.++++++++..||++....
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~----~~~---~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 107 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE----TLG---RIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLEL 107 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCC----EEE---EEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECS
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCC----eEe---eEEcCCcccccccccceEECCCCCEEEEEeccccccc
Confidence 48999999999877666 667899999965554 122 222221 0112578999998555888864110
Q ss_pred CCC--ccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCCc-EEEEecCCcc-c-
Q 039428 123 LGN--KYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEGQ-LLSIIRSPLF-T- 196 (335)
Q Consensus 123 ~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~-~- 196 (335)
... ..+.|.+||.++++....... ...|++++++|+|+ +|++ ++.|+++|.++. ....+..... .
T Consensus 108 ~~~~~~~~~i~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~ 178 (337)
T 1pby_B 108 THFEVQPTRVALYDAETLSRRKAFEA------PRQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPIQSWEAE 178 (337)
T ss_dssp SCEEECCCEEEEEETTTTEEEEEEEC------CSSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEECSTTTTTT
T ss_pred ccccccCceEEEEECCCCcEEEEEeC------CCCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeeeccccCCC
Confidence 000 014699999998877644433 24578999999996 8888 478999998744 3333321110 0
Q ss_pred ---ccc---------------------------------------------------ccccccccCeEEEccCC-eEEEE
Q 039428 197 ---AKE---------------------------------------------------WYKNVFGLNGIVYHPDG-FLIVI 221 (335)
Q Consensus 197 ---~~~---------------------------------------------------~~~~~~~p~Gia~~~dg-~Lyva 221 (335)
.|. ..+....+.+++++||| .||++
T Consensus 179 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 258 (337)
T 1pby_B 179 TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA 258 (337)
T ss_dssp TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe
Confidence 000 00011246679999999 78888
Q ss_pred ECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEecCCCeEEEEEcCCC
Q 039428 222 HMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 222 d~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~~~~~~~v~~~~~~ 283 (335)
+++|+++|++..+ ....+.. + ..|.+++++++|+ +|+++. .+.+.+++...+
T Consensus 259 ---~~~v~~~d~~~~~-~~~~~~~-~----~~~~~~~~s~dg~~l~~~~~-~~~i~v~d~~~~ 311 (337)
T 1pby_B 259 ---YNVLESFDLEKNA-SIKRVPL-P----HSYYSVNVSTDGSTVWLGGA-LGDLAAYDAETL 311 (337)
T ss_dssp ---ESEEEEEETTTTE-EEEEEEC-S----SCCCEEEECTTSCEEEEESB-SSEEEEEETTTC
T ss_pred ---CCeEEEEECCCCc-CcceecC-C----CceeeEEECCCCCEEEEEcC-CCcEEEEECcCC
Confidence 5899999998864 4445543 2 2489999999986 777643 477888887654
No 103
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.43 E-value=1.4e-10 Score=108.98 Aligned_cols=222 Identities=14% Similarity=0.111 Sum_probs=149.6
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
...+++|++++++|+++..++.|..||..+++ .+. .+... +..+.++++++++..+|++... . ..
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~----~~~---~~~~~---~~~~~~~~~~~~~~~l~~~~~~--~---~~ 235 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLA----YKA---TVDLT---GKWSKILLYDPIRDLVYCSNWI--S---ED 235 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC----EEE---EEECS---SSSEEEEEEETTTTEEEEEETT--T---TE
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCce----EEE---EEcCC---CCCeeEEEEcCCCCEEEEEecC--C---Cc
Confidence 45678999998888777888999999965444 122 22211 2367899999866667775321 1 36
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeC-------CCCeEEEEccCCcE-EEEecCCccccccc
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDV-------VSSKIWKVGVEGQL-LSIIRSPLFTAKEW 200 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~-------~~~~I~~~d~~g~~-~~~~~~~~~~~~~~ 200 (335)
|.+||+++++....... ...+.+++++++|+ +|++.. ..+.|+.+|..+.. ...+.
T Consensus 236 i~~~d~~~~~~~~~~~~------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~--------- 300 (433)
T 3bws_A 236 ISVIDRKTKLEIRKTDK------IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG--------- 300 (433)
T ss_dssp EEEEETTTTEEEEECCC------CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE---------
T ss_pred EEEEECCCCcEEEEecC------CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc---------
Confidence 99999998877644322 23588999999985 677654 35789999986443 33221
Q ss_pred cccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEecCC------
Q 039428 201 YKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGNPY------ 272 (335)
Q Consensus 201 ~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~~~------ 272 (335)
....+.+++++|+| .+|++...+++|..+|+++.+ ....+.. + ..|.++++.++|+ +|+++...
T Consensus 301 --~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~-~~~~~~~-~----~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 372 (433)
T 3bws_A 301 --PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK-VQKSIPV-F----DKPNTIALSPDGKYLYVSCRGPNHPTEG 372 (433)
T ss_dssp --EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE-EEEEEEC-S----SSEEEEEECTTSSEEEEEECCCCCTTTC
T ss_pred --CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc-EEEEecC-C----CCCCeEEEcCCCCEEEEEecCCCccccc
Confidence 11247899999999 899999999999999998763 4444442 2 3478999999986 77775432
Q ss_pred --------CeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe--CCeEEEEe
Q 039428 273 --------PSARLVESSDGWETASVVAKFNGPTHRVATAATVK--DGRVYLSH 315 (335)
Q Consensus 273 --------~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~--~g~lyV~~ 315 (335)
+.+++++...+ +....+.. ...|+++++. +..||++.
T Consensus 373 ~~~~g~~dg~v~~~d~~~~----~~~~~~~~--~~~~~~~~~s~dg~~l~~~~ 419 (433)
T 3bws_A 373 YLKKGLVLGKVYVIDTTTD----TVKEFWEA--GNQPTGLDVSPDNRYLVISD 419 (433)
T ss_dssp TTSCCSSCCEEEEEETTTT----EEEEEEEC--SSSEEEEEECTTSCEEEEEE
T ss_pred cccccccceEEEEEECCCC----cEEEEecC--CCCCceEEEcCCCCEEEEEE
Confidence 26888876554 22333322 3357788885 44566654
No 104
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.43 E-value=2.1e-10 Score=112.88 Aligned_cols=238 Identities=13% Similarity=0.118 Sum_probs=155.0
Q ss_pred CcceeeeEEcCCCCEEEEEecCCeEEEEECC--CCCCCcceeeeeEEeecCCcCCCCcceEEEe----CCCCeEEEEEec
Q 039428 48 SFLCETAKWDDVGRRFLVSFLDGGVGQVLVP--DEYSPGTVLEEVKLVKEDDVVGNATMGIAVD----RPRNRLLVAFTD 121 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~~~~I~~~d~~--~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d----~~~g~l~v~~~D 121 (335)
+..|++++++++|+.+|++..++.|.+||.. +.+ ++. .+ + .+..|.+++++ |++..+||++..
T Consensus 196 g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~----~v~---~i--~--~G~~P~~ia~s~~~~pDGk~l~v~n~~ 264 (567)
T 1qks_A 196 GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT----TVA---EI--K--IGSEARSIETSKMEGWEDKYAIAGAYW 264 (567)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC----EEE---EE--E--CCSEEEEEEECCSTTCTTTEEEEEEEE
T ss_pred CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCc----EeE---EE--e--cCCCCceeEEccccCCCCCEEEEEEcc
Confidence 4578999999999998988778899999963 222 222 12 1 13468999999 566789997654
Q ss_pred CCCCccceEEEEECCCCeEEEEeecCCCc-c-----CCCCCCceeECCCC-cEEEEeCCCCeEEEEccCCc-EEEEecCC
Q 039428 122 VLGNKYSALAAYDLSTWKRLFLTQLSGKS-E-----EKSTADDIAVDAEG-NAYVTDVVSSKIWKVGVEGQ-LLSIIRSP 193 (335)
Q Consensus 122 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~-----~~~~p~~~~vd~~G-~lyV~d~~~~~I~~~d~~g~-~~~~~~~~ 193 (335)
. +.|.++|..+.+++..+...+.. . +...+..+...+++ .+|++....+.|+.+|.... ...+.
T Consensus 265 ~-----~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~--- 336 (567)
T 1qks_A 265 P-----PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTT--- 336 (567)
T ss_dssp T-----TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEE---
T ss_pred C-----CeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceee---
Confidence 3 46999999998877555442110 0 01244567777775 57777788899999997642 11110
Q ss_pred ccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCC-CeEEE-cCC-CcEEEEe
Q 039428 194 LFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLG-DGLAL-LSP-TKLVVAG 269 (335)
Q Consensus 194 ~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~p-dGia~-d~~-g~l~va~ 269 (335)
.. +....++++.++||| ++|+++..+++|.++|...++ ....+++.+.. .-| .|..+ +++ |.+|++.
T Consensus 337 ~i------~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k-l~~~i~vgg~~--Phpg~g~~~~~p~~g~v~~t~ 407 (567)
T 1qks_A 337 EI------SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK-LVAIEDTGGQT--PHPGRGANFVHPTFGPVWATS 407 (567)
T ss_dssp EE------ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE-EEEEEECSSSS--BCCTTCEEEEETTTEEEEEEE
T ss_pred ee------eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc-EEEEEeccCcC--CCCccceeeECCCCCcEEEeC
Confidence 00 012347899999999 899999999999999999874 44556541312 223 47664 676 6799885
Q ss_pred c-CCCeEEEEEcCCC------cEEEEEeeeecCCCCCcceEEEEe--CCeEEEEecc
Q 039428 270 N-PYPSARLVESSDG------WETASVVAKFNGPTHRVATAATVK--DGRVYLSHLL 317 (335)
Q Consensus 270 ~-~~~~~~v~~~~~~------~~~~~~~~~~~~p~~~~Pt~va~~--~g~lyV~~~~ 317 (335)
. +++.+.|++.+.+ |+..+.+... ++ .+..+... +.+|||+...
T Consensus 408 ~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~-g~---g~~~i~~~p~~~~l~v~~~~ 460 (567)
T 1qks_A 408 HMGDDSVALIGTDPEGHPDNAWKILDSFPAL-GG---GSLFIKTHPNSQYLYVDATL 460 (567)
T ss_dssp BSSSSEEEEEECCTTTCTTTBTSEEEEEECS-CS---CCCCEECCTTCSEEEEECTT
T ss_pred CCCCCeEEEecCCCCCCccccCEEEEEEecC-CC---CCEEEEeCCCCCeEEEecCC
Confidence 3 5578999987642 6554433321 11 11224443 5679986644
No 105
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.42 E-value=6.5e-11 Score=109.68 Aligned_cols=225 Identities=12% Similarity=0.088 Sum_probs=132.2
Q ss_pred eeeeEEcCCCCE-EEEE-e-------------cCCeEEEEECC-CCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCe
Q 039428 51 CETAKWDDVGRR-FLVS-F-------------LDGGVGQVLVP-DEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNR 114 (335)
Q Consensus 51 pegia~d~~g~~-~~~~-~-------------~~~~I~~~d~~-~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~ 114 (335)
|.+++++|+|+. ++.. . .++++..++.. +++ +.......... .+..+++++++|++..
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~----~~~~~~~~~~~--~~~~~~~~~~spdG~~ 158 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGK----LEKNVQNYEYQ--ENTGIHGMVFDPTETY 158 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCC----EEEEEEEEECC--TTCCEEEEEECTTSSE
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCc----CcceEeeEEeC--CCCcceEEEECCCCCE
Confidence 778999999984 3322 2 46777766642 343 11111111111 1246899999985456
Q ss_pred EEEEEecCCCCccceEEEEECC-CCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccC---CcEEE-
Q 039428 115 LLVAFTDVLGNKYSALAAYDLS-TWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVE---GQLLS- 188 (335)
Q Consensus 115 l~v~~~D~~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~---g~~~~- 188 (335)
||++ |... +.|.+||.+ ++++.....+..+. ....|.+++++|||+ +|+++...+.|.+++.+ |+...
T Consensus 159 l~~~--~~~~---~~v~~~~~~~~g~~~~~~~~~~~~-~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~ 232 (365)
T 1jof_A 159 LYSA--DLTA---NKLWTHRKLASGEVELVGSVDAPD-PGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYT 232 (365)
T ss_dssp EEEE--ETTT---TEEEEEEECTTSCEEEEEEEECSS-TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred EEEE--cCCC---CEEEEEEECCCCCEEEeeeEecCC-CCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEc
Confidence 8774 4322 359999987 67654222221111 135689999999994 89998877877776532 44321
Q ss_pred --EecCCccccccccc------cccccCeEE-EccCC-eEEEEECCCC-----EEEEEeCCCCceeEEE----EeccCCc
Q 039428 189 --IIRSPLFTAKEWYK------NVFGLNGIV-YHPDG-FLIVIHMCSG-----NLFKIDIRKEEEEVKL----IELRGGS 249 (335)
Q Consensus 189 --~~~~~~~~~~~~~~------~~~~p~Gia-~~~dg-~Lyvad~~~~-----~v~~~d~~~~~~~~~~----~~~~g~~ 249 (335)
.+. .+.. +... ....+.+++ ++||| +||+++...+ +|..++++..+ .... +...+
T Consensus 233 ~~~~~--~~~~-~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g-~~~~~~~~~~~~~-- 306 (365)
T 1jof_A 233 HHSFP--LIPP-GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCG-SIEKQLFLSPTPT-- 306 (365)
T ss_dssp EEEEE--SSCT-TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTS-CEEEEEEEEECSS--
T ss_pred cceEE--cCCC-CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCC-CEEEeeeeeecCC--
Confidence 111 1100 0000 011488999 99999 8999987665 88888775221 3332 22222
Q ss_pred CCCCCCeEEEcC---CC-cEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCC
Q 039428 250 SLSLGDGLALLS---PT-KLVVAGNPYPSARLVESSDGWETASVVAKFNGPT 297 (335)
Q Consensus 250 ~~~~pdGia~d~---~g-~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~ 297 (335)
..|.+++++| +| .||+++..++.+.+++.+.+ ..+....+..|.
T Consensus 307 --~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~--~l~~~~~~~~~~ 354 (365)
T 1jof_A 307 --SGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE--FLHRVARVRIPE 354 (365)
T ss_dssp --CCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT--EEEEEEEEECCS
T ss_pred --CCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh--hCceeeEEEcCC
Confidence 3489999999 67 57888765578888876554 223334454443
No 106
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.42 E-value=3.8e-11 Score=109.03 Aligned_cols=204 Identities=11% Similarity=0.126 Sum_probs=128.8
Q ss_pred CcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCC---ccCCCCCCceeE---CCCCcEEE-EeC--
Q 039428 102 ATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGK---SEEKSTADDIAV---DAEGNAYV-TDV-- 172 (335)
Q Consensus 102 ~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~p~~~~v---d~~G~lyV-~d~-- 172 (335)
.|.+++.|++++++|+ ++... ..|.++|+.++..... .++.. +.+...+.|+.+ |++|++|| ++.
T Consensus 14 yPE~~~wd~~~g~~~v--s~l~~---g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQ--SNLYK---GRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp CCSCEEEETTTTEEEE--EETTT---TEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred CCcCccCcCCCCEEEE--EeccC---CEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 5789999988899999 55443 4699999986654422 33221 222456789999 79999998 452
Q ss_pred ----------CCCeEEEEccC----CcEEEEecCCccccc--cccc-cccccCeEEEccCCeEEEEECCC-CEEEEEeCC
Q 039428 173 ----------VSSKIWKVGVE----GQLLSIIRSPLFTAK--EWYK-NVFGLNGIVYHPDGFLIVIHMCS-GNLFKIDIR 234 (335)
Q Consensus 173 ----------~~~~I~~~d~~----g~~~~~~~~~~~~~~--~~~~-~~~~p~Gia~~~dg~Lyvad~~~-~~v~~~d~~ 234 (335)
....|.++|++ ++....+.-...... ...+ ...++|.|++|++|+.||+++.. +.|+|++++
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 35789999988 555443221000000 0000 12359999999999999999999 999999999
Q ss_pred CCceeEEEEeccC--CcCCCCCCeEEEcCCCc-EEEEecCCCeEEEEEcCCCcEEEEEeeee-c-CCCCCcceEE-EEe-
Q 039428 235 KEEEEVKLIELRG--GSSLSLGDGLALLSPTK-LVVAGNPYPSARLVESSDGWETASVVAKF-N-GPTHRVATAA-TVK- 307 (335)
Q Consensus 235 ~~~~~~~~~~~~g--~~~~~~pdGia~d~~g~-l~va~~~~~~~~v~~~~~~~~~~~~~~~~-~-~p~~~~Pt~v-a~~- 307 (335)
+. .+..+.... .....++.||++.++|+ |++++. .+++..++...-. ..++.... . ...+..|.++ +..
T Consensus 168 G~--~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv-~~~v~~~~~G~~~~~~~~dgilp~~~ 243 (334)
T 2p9w_A 168 GK--TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPY-AWPEPVKINGDFGTLSGTEKIVTVPV 243 (334)
T ss_dssp SC--CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSS-CCCEECEESSCCCCCTTEEEEEEEEE
T ss_pred CC--EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCc-ceeecccccCCcccccCccccccccc
Confidence 87 444443211 11234688999999996 555555 5778877765211 10111110 0 0235567785 554
Q ss_pred CCeE-EEEe
Q 039428 308 DGRV-YLSH 315 (335)
Q Consensus 308 ~g~l-yV~~ 315 (335)
+|++ +|++
T Consensus 244 ~G~vllV~~ 252 (334)
T 2p9w_A 244 GNESVLVGA 252 (334)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEEc
Confidence 7776 7765
No 107
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.39 E-value=1.4e-10 Score=107.50 Aligned_cols=213 Identities=12% Similarity=0.079 Sum_probs=128.0
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECC-CCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCe-EEEEEec-----
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVP-DEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNR-LLVAFTD----- 121 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~-~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~-l~v~~~D----- 121 (335)
..|..++++++|+.+|+...+ .|..|+.. +++ +.. ....+. +..|..++++| +|+ +|+..++
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~-----~~~--~~~~~~--~g~~~~~~~sp-dg~~l~~~~~~~~~~~ 108 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTE-----IVH--EASHPI--GGHPRANDADT-NTRAIFLLAAKQPPYA 108 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTE-----EEE--EEEEEC--CSSGGGGCTTS-CCEEEEEEECSSTTCC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCC-----EEE--eeEeec--CCCCccEEECC-CCCEEEEEEecCCcce
Confidence 368899999999977777444 88888743 343 111 222111 12467889997 565 3543343
Q ss_pred -CC-----CCccceEEEEECC-CCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccC--CcEEEEec
Q 039428 122 -VL-----GNKYSALAAYDLS-TWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVE--GQLLSIIR 191 (335)
Q Consensus 122 -~~-----~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~--g~~~~~~~ 191 (335)
.. .+ +.+..|+.+ .+++........ .+....|++++++|||+ +|+++...++|++++.+ |+... +.
T Consensus 109 ~~~~~~~~~~--g~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~-~~ 184 (365)
T 1jof_A 109 VYANPFYKFA--GYGNVFSVSETGKLEKNVQNYE-YQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL-VG 184 (365)
T ss_dssp EEEEEESSSC--CEEEEEEECTTCCEEEEEEEEE-CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEE-EE
T ss_pred eccceeecCC--ceEEEEccCCCCcCcceEeeEE-eCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEE-ee
Confidence 10 11 347777765 354432221100 01145789999999996 89999888899999976 44322 11
Q ss_pred CCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCC--CCcee--EEEEec-cCCc-CCC-------CCCeE
Q 039428 192 SPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIR--KEEEE--VKLIEL-RGGS-SLS-------LGDGL 257 (335)
Q Consensus 192 ~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~--~~~~~--~~~~~~-~g~~-~~~-------~pdGi 257 (335)
.+..+ ....+|.+++++||| +||+++..+++|..++.+ .++.. .+.+.. +.+. ... .|.++
T Consensus 185 --~~~~~---~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 259 (365)
T 1jof_A 185 --SVDAP---DPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADV 259 (365)
T ss_dssp --EEECS---STTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEE
T ss_pred --eEecC---CCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccE
Confidence 11100 013459999999999 899999888888777654 33201 123332 1110 001 37789
Q ss_pred E-EcCCCc-EEEEecCCC-----eEEEEEcC
Q 039428 258 A-LLSPTK-LVVAGNPYP-----SARLVESS 281 (335)
Q Consensus 258 a-~d~~g~-l~va~~~~~-----~~~v~~~~ 281 (335)
+ ++++|+ ||+++.+.+ .+.+++.+
T Consensus 260 ~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 260 CALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred EEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 9 999995 788865434 78888765
No 108
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.39 E-value=3.4e-11 Score=111.75 Aligned_cols=223 Identities=9% Similarity=-0.025 Sum_probs=128.3
Q ss_pred ceeeeEEcCC---CCEEEEE-ec-------CCeEEEEECCCCCCCcceeeeeEEee-cCC--cCCCCcceEEEeCCCCeE
Q 039428 50 LCETAKWDDV---GRRFLVS-FL-------DGGVGQVLVPDEYSPGTVLEEVKLVK-EDD--VVGNATMGIAVDRPRNRL 115 (335)
Q Consensus 50 ~pegia~d~~---g~~~~~~-~~-------~~~I~~~d~~~g~~~~~v~~~~~~~~-~~~--~~~~~p~Gi~~d~~~g~l 115 (335)
.|.+++++|+ ++.+|++ .. ..+|.+++...+.. ++.....++. .+. ...+.+.+|++++ +|.|
T Consensus 67 g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~--~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~L 143 (353)
T 2g8s_A 67 GLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLS--KVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYL 143 (353)
T ss_dssp SEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSS--BEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEE
T ss_pred CceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCC--CCCceEEEEEECCCCCCCcccCccEEECC-CCcE
Confidence 4679999995 4444454 33 35799887432210 0111112222 232 1124578999997 7899
Q ss_pred EEEEecCCC--------CccceEEEEECCCCeEEEEeec--------CCCccCCCCCCceeECC-CCcEEEEeCCC---C
Q 039428 116 LVAFTDVLG--------NKYSALAAYDLSTWKRLFLTQL--------SGKSEEKSTADDIAVDA-EGNAYVTDVVS---S 175 (335)
Q Consensus 116 ~v~~~D~~~--------~~~~~v~~~d~~~~~~~~~~~~--------~~~~~~~~~p~~~~vd~-~G~lyV~d~~~---~ 175 (335)
|++..|... ....+|+++|+++.-.. .-++ ..-..++..|+++++|+ +|++|++|... .
T Consensus 144 yv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~-~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~d 222 (353)
T 2g8s_A 144 FIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD-DNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGD 222 (353)
T ss_dssp EEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT-TCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCE
T ss_pred EEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC-CCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCc
Confidence 998765432 11247999998753100 0000 00001256799999999 79999999764 3
Q ss_pred eEEEEccCCcEEE---Eec---------------CCccccccc-cccccccCeEEEcc-------CCeEEEEECCCCEEE
Q 039428 176 KIWKVGVEGQLLS---IIR---------------SPLFTAKEW-YKNVFGLNGIVYHP-------DGFLIVIHMCSGNLF 229 (335)
Q Consensus 176 ~I~~~d~~g~~~~---~~~---------------~~~~~~~~~-~~~~~~p~Gia~~~-------dg~Lyvad~~~~~v~ 229 (335)
.|.++.+.+..-. ..+ .+.+..|.. -.....|.|+++.. +|.+||++...++|+
T Consensus 223 ei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~ 302 (353)
T 2g8s_A 223 EINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVI 302 (353)
T ss_dssp EEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEE
T ss_pred EEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEE
Confidence 6777765443200 000 000111110 01124689999974 589999999999999
Q ss_pred EEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEE-ecCCCeEEEE
Q 039428 230 KIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVA-GNPYPSARLV 278 (335)
Q Consensus 230 ~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va-~~~~~~~~v~ 278 (335)
++++++++ ......+.... ...|.+|+++++|.|||+ +...++++.+
T Consensus 303 ~~~~~~~~-~~~~~~~~~~~-~~rp~~v~~~pdG~lyv~td~~~g~I~ri 350 (353)
T 2g8s_A 303 VMSVNGDK-VTEDGRILTDR-GQRIRDVRTGPDGYLYVLTDESSGELLKV 350 (353)
T ss_dssp EEEEETTE-EEEEEEESGGG-CCCEEEEEECTTSCEEEEECSTTEEEEEE
T ss_pred EEEeCCCe-EeeeEEcccCC-CCceeEEEECCCCcEEEEEeCCCCEEEEE
Confidence 99998652 22221111111 346999999999999997 4433444433
No 109
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.38 E-value=4.4e-10 Score=105.57 Aligned_cols=203 Identities=17% Similarity=0.194 Sum_probs=140.1
Q ss_pred cCCCcceeeeEEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCC
Q 039428 45 HSPSFLCETAKWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVL 123 (335)
Q Consensus 45 ~~~~~~pegia~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~ 123 (335)
......+.+++|+++++.+|++ ..++.|..||..+++ .+. .+ +. ...+.++++++++..+|++..+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~----~~~---~~--~~--~~~~~~~~~~~~g~~l~~~~~~~~ 276 (433)
T 3bws_A 208 DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL----EIR---KT--DK--IGLPRGLLLSKDGKELYIAQFSAS 276 (433)
T ss_dssp ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE----EEE---EC--CC--CSEEEEEEECTTSSEEEEEEEESC
T ss_pred cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc----EEE---Ee--cC--CCCceEEEEcCCCCEEEEEECCCC
Confidence 3345578999999999988777 568999999965443 111 22 21 135789999985557777543221
Q ss_pred CC--ccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCC-cEEEEeCCCCeEEEEccCCcE-EEEecCCcccccc
Q 039428 124 GN--KYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEG-NAYVTDVVSSKIWKVGVEGQL-LSIIRSPLFTAKE 199 (335)
Q Consensus 124 ~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G-~lyV~d~~~~~I~~~d~~g~~-~~~~~~~~~~~~~ 199 (335)
.- ....|..||+++++....... ...+..++++++| .+|++....+.|..+|.++.. ...+.
T Consensus 277 ~~~~~dg~i~~~d~~~~~~~~~~~~------~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-------- 342 (433)
T 3bws_A 277 NQESGGGRLGIYSMDKEKLIDTIGP------PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-------- 342 (433)
T ss_dssp TTCSCCEEEEEEETTTTEEEEEEEE------EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE--------
T ss_pred ccccCCCeEEEEECCCCcEEeeccC------CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec--------
Confidence 00 014699999998877644322 2356789999998 599999999999999987543 33221
Q ss_pred ccccccccCeEEEccCC-eEEEEECCC--------------CEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc
Q 039428 200 WYKNVFGLNGIVYHPDG-FLIVIHMCS--------------GNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK 264 (335)
Q Consensus 200 ~~~~~~~p~Gia~~~dg-~Lyvad~~~--------------~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~ 264 (335)
....+.+++++|+| .||++.... ++|+.+|+...+ ....+.. + ..|.+++++++|+
T Consensus 343 ---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~-~~~~~~~-~----~~~~~~~~s~dg~ 413 (433)
T 3bws_A 343 ---VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT-VKEFWEA-G----NQPTGLDVSPDNR 413 (433)
T ss_dssp ---CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE-EEEEEEC-S----SSEEEEEECTTSC
T ss_pred ---CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc-EEEEecC-C----CCCceEEEcCCCC
Confidence 12348899999999 788888764 599999998763 4444543 2 3488999999986
Q ss_pred -EEEEecCCCeEEEEEcC
Q 039428 265 -LVVAGNPYPSARLVESS 281 (335)
Q Consensus 265 -l~va~~~~~~~~v~~~~ 281 (335)
+++++...+.+++++.+
T Consensus 414 ~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 414 YLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEEEEETTTTEEEEEEET
T ss_pred EEEEEECCCCeEEEEEec
Confidence 55555445778877653
No 110
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.38 E-value=1.8e-10 Score=113.44 Aligned_cols=207 Identities=15% Similarity=0.066 Sum_probs=137.5
Q ss_pred ceeeeEEcCC-CCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 50 LCETAKWDDV-GRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 50 ~pegia~d~~-g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
.|..+.+..+ ++++|++ ..+++|.++|..+++ ++. .+. .+..|+++++++++..+||++.|
T Consensus 155 ~P~~~~~~~d~~~~~~V~~~~~~~V~viD~~t~~----v~~---~i~----~g~~p~~v~~SpDGr~lyv~~~d------ 217 (567)
T 1qks_A 155 RPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYE----IKT---VLD----TGYAVHISRLSASGRYLFVIGRD------ 217 (567)
T ss_dssp SCSSCCSCCCGGGEEEEEETTTTEEEEEETTTCC----EEE---EEE----CSSCEEEEEECTTSCEEEEEETT------
T ss_pred cccccccccCCCceEEEEeCCCCeEEEEECCCCe----EEE---EEe----CCCCccceEECCCCCEEEEEcCC------
Confidence 3555555444 4567777 778999999965444 232 221 12368899999877788996422
Q ss_pred ceEEEEECC--CCeEEEEeecCCCccCCCCCCceeEC----CCC-cEEEEeCCCCeEEEEccCCc-EEEEecCCcccccc
Q 039428 128 SALAAYDLS--TWKRLFLTQLSGKSEEKSTADDIAVD----AEG-NAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAKE 199 (335)
Q Consensus 128 ~~v~~~d~~--~~~~~~~~~~~~~~~~~~~p~~~~vd----~~G-~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~~ 199 (335)
+.|.+||+. ++++...+.. ...|.+++++ ||| .+||++...+.|.++|.... .+..+.........
T Consensus 218 g~V~viD~~~~t~~~v~~i~~------G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~ 291 (567)
T 1qks_A 218 GKVNMIDLWMKEPTTVAEIKI------GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDE 291 (567)
T ss_dssp SEEEEEETTSSSCCEEEEEEC------CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTT
T ss_pred CeEEEEECCCCCCcEeEEEec------CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccc
Confidence 469999995 6666644433 3468899999 698 59999999999999997643 33322211100000
Q ss_pred -ccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEecCCCeEE
Q 039428 200 -WYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGNPYPSAR 276 (335)
Q Consensus 200 -~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~~~~~~~ 276 (335)
.......+.+|..++++ ..+++...+++|+.+|....+ ......+.. . ..|.++.++++|+ +|++++.++.+.
T Consensus 292 ~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~-~~~v~~i~~-~--~~~~d~~~~pdgr~~~va~~~sn~V~ 367 (567)
T 1qks_A 292 QEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLN-NLKTTEISA-E--RFLHDGGLDGSHRYFITAANARNKLV 367 (567)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSS-EEEEEEEEC-C--SSEEEEEECTTSCEEEEEEGGGTEEE
T ss_pred ccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCc-cceeeeeec-c--ccccCceECCCCCEEEEEeCCCCeEE
Confidence 00001134588889887 788888899999999998753 233222222 1 3488999999996 677777779999
Q ss_pred EEEcCCC
Q 039428 277 LVESSDG 283 (335)
Q Consensus 277 v~~~~~~ 283 (335)
|++...+
T Consensus 368 ViD~~t~ 374 (567)
T 1qks_A 368 VIDTKEG 374 (567)
T ss_dssp EEETTTT
T ss_pred EEECCCC
Confidence 9998765
No 111
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.36 E-value=4e-11 Score=116.84 Aligned_cols=240 Identities=15% Similarity=0.121 Sum_probs=150.6
Q ss_pred CCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEE-e-CCCCeEEEEEec-------CC-----
Q 039428 59 VGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAV-D-RPRNRLLVAFTD-------VL----- 123 (335)
Q Consensus 59 ~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~-d-~~~g~l~v~~~D-------~~----- 123 (335)
+|+.+|++ ..+++|.++|....+ +. ..+..|. +..|+|+++ . |+.+.+|+++.. ..
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~-----~~--~ii~ip~--g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~ 170 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMK-----CD--AILEIPN--AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV 170 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTE-----EE--EEEECSS--CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG
T ss_pred CCCEEEEEcCCCCEEEEEECCCce-----Ee--eEEeCCC--CCCCcceeeeecCCCcEEEEecccccccCCCCcccccc
Confidence 78888888 667899999964333 12 2334443 247999998 4 677889886311 00
Q ss_pred CCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCC--------------CeEEEEcc------
Q 039428 124 GNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVS--------------SKIWKVGV------ 182 (335)
Q Consensus 124 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~--------------~~I~~~d~------ 182 (335)
+.-.+.+.++|.++.++.+.+.. ...|.+++++++|+ +|++...+ ..|.+++.
T Consensus 171 ~~~~~~vtvID~~t~~v~~qI~V------gg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~ 244 (595)
T 1fwx_A 171 ANYVNVFTAVDADKWEVAWQVLV------SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKA 244 (595)
T ss_dssp GGEEEEEEEEETTTTEEEEEEEE------SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHH
T ss_pred cccCceEEEEECCCCeEEEEEEe------CCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEe
Confidence 00025799999999998877765 12689999999985 88887654 33444442
Q ss_pred --CCcEE-----EEecCCcc--cc-ccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCc-----------eeE
Q 039428 183 --EGQLL-----SIIRSPLF--TA-KEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEE-----------EEV 240 (335)
Q Consensus 183 --~g~~~-----~~~~~~~~--~~-~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~-----------~~~ 240 (335)
+|+.. .++..... .. ....+....|+|+.++||| ++||++..+++|.+||.+..+ ...
T Consensus 245 v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~ 324 (595)
T 1fwx_A 245 IAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV 324 (595)
T ss_dssp HHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEE
T ss_pred ccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceE
Confidence 22211 11111110 00 0112345679999999999 899999999999999998531 011
Q ss_pred EEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCc------EEEEEeeeecCCCCCcc------eEEEE--
Q 039428 241 KLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGW------ETASVVAKFNGPTHRVA------TAATV-- 306 (335)
Q Consensus 241 ~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~------~~~~~~~~~~~p~~~~P------t~va~-- 306 (335)
..+. .| .+|.+++++++|++|+++.-++.+.+++.+... +..+++.++. .+-.| .++++
T Consensus 325 ~~v~-vG----~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kid--V~yqpGh~~~~~g~t~~~ 397 (595)
T 1fwx_A 325 AEPE-LG----LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLD--VHYQPGHLKTVMGETLDA 397 (595)
T ss_dssp ECCB-CC----SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEE--CSSCEEEEEETTTTSTTC
T ss_pred EEcC-CC----CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEee--cccccccceeccceEeCC
Confidence 1222 23 359999999999999998877888888765410 1123344432 22223 22333
Q ss_pred eCCeEEEEeccCCC
Q 039428 307 KDGRVYLSHLLGLG 320 (335)
Q Consensus 307 ~~g~lyV~~~~~~~ 320 (335)
++..||+++.++..
T Consensus 398 DGk~l~~~Nk~skd 411 (595)
T 1fwx_A 398 TNDWLVCLSKFSKD 411 (595)
T ss_dssp CSSEEEEEESCCTT
T ss_pred CCCEEEEcCCCCcc
Confidence 36779998877643
No 112
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.35 E-value=1.2e-09 Score=101.98 Aligned_cols=117 Identities=13% Similarity=0.036 Sum_probs=76.7
Q ss_pred EcCCCCEEEEE-e-cCC---eEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecC----CCCc
Q 039428 56 WDDVGRRFLVS-F-LDG---GVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDV----LGNK 126 (335)
Q Consensus 56 ~d~~g~~~~~~-~-~~~---~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~----~~~~ 126 (335)
..++++.+|+. . ..+ .|+++|..+++ ++. .+ + .+..| +|+++|++..+||++... .+..
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~----~~~---~i--~--~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~ 95 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGS----ILG---HV--N--GGFLP-NPVAAHSGSEFALASTSFSRIAKGKR 95 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCe----EEE---Ee--c--CCCCC-CeEECCCCCEEEEEeccccccccCCC
Confidence 34677777777 4 333 88999965443 222 22 2 12357 999999888999975311 0111
Q ss_pred cceEEEEECCCCeEEEEeecCCCcc--CCCCCCceeECCCCc-EEEEeCC-CCeEEEEccCCc
Q 039428 127 YSALAAYDLSTWKRLFLTQLSGKSE--EKSTADDIAVDAEGN-AYVTDVV-SSKIWKVGVEGQ 185 (335)
Q Consensus 127 ~~~v~~~d~~~~~~~~~~~~~~~~~--~~~~p~~~~vd~~G~-lyV~d~~-~~~I~~~d~~g~ 185 (335)
.+.|.+||+++.++...+.+..... ....|.+++++|||+ +||++.. .+.|.++| ++.
T Consensus 96 ~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~ 157 (373)
T 2mad_H 96 TDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGG 157 (373)
T ss_pred CCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCC
Confidence 1468999999887775555431111 125688999999985 9999865 68999999 754
No 113
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.35 E-value=3.7e-10 Score=102.46 Aligned_cols=208 Identities=14% Similarity=0.076 Sum_probs=129.8
Q ss_pred ceeeeEEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCc---CCCCcceEEEeCCCCeEEEEEecC---
Q 039428 50 LCETAKWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDV---VGNATMGIAVDRPRNRLLVAFTDV--- 122 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~---~~~~p~Gi~~d~~~g~l~v~~~D~--- 122 (335)
.|.+++++++|+.+|++ ..++.|+++|..+++ +.. .+..+.. .+..+.++++++++..||++..+.
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~----~~~---~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 116 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK----NTF---HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRL 116 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTE----EEE---EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc----EEE---EEEcccccccccccccceEECCCCCEEEEEccccccc
Confidence 58899999999877666 567899999965443 121 2222210 012478999998666788865330
Q ss_pred ---CCCccceEEEEECCCCeEE---EEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccC-CcEEEEecCCcc
Q 039428 123 ---LGNKYSALAAYDLSTWKRL---FLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVE-GQLLSIIRSPLF 195 (335)
Q Consensus 123 ---~~~~~~~v~~~d~~~~~~~---~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~-g~~~~~~~~~~~ 195 (335)
.......|.+||+++++.. ..... ...+.+++++++|++|+++ +.|+++|.+ ++....+.....
T Consensus 117 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------~~~~~~~~~s~dg~l~~~~---~~i~~~d~~~~~~~~~~~~~~~ 187 (349)
T 1jmx_B 117 NDHYVVKPPRLEVFSTADGLEAKPVRTFPM------PRQVYLMRAADDGSLYVAG---PDIYKMDVKTGKYTVALPLRNW 187 (349)
T ss_dssp SSCEEECCCEEEEEEGGGGGGBCCSEEEEC------CSSCCCEEECTTSCEEEES---SSEEEECTTTCCEEEEECSTTC
T ss_pred ccccccCCCeEEEEECCCccccceeeeccC------CCcccceeECCCCcEEEcc---CcEEEEeCCCCceecccccccc
Confidence 0000146999998875322 11111 2357789999999988863 349999986 444433321110
Q ss_pred ccc--------------cc--------------------------------------------cccccccCeEEEcc-CC
Q 039428 196 TAK--------------EW--------------------------------------------YKNVFGLNGIVYHP-DG 216 (335)
Q Consensus 196 ~~~--------------~~--------------------------------------------~~~~~~p~Gia~~~-dg 216 (335)
..+ .. .+....+.+++++| ||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg 267 (349)
T 1jmx_B 188 NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP 267 (349)
T ss_dssp CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT
T ss_pred CCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC
Confidence 000 00 00012466788889 99
Q ss_pred -eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCC-cEEEEecCCCeEEEEEcCCC
Q 039428 217 -FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPT-KLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 217 -~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g-~l~va~~~~~~~~v~~~~~~ 283 (335)
.||++ .++|+++|+...+ ....+.. + ..|.+++++++| .||+++. .+.+.+++...+
T Consensus 268 ~~l~~~---~~~v~~~d~~~~~-~~~~~~~-~----~~~~~~~~s~dg~~l~~~~~-~~~v~v~d~~~~ 326 (349)
T 1jmx_B 268 NQIYGV---LNRLAKYDLKQRK-LIKAANL-D----HTYYCVAFDKKGDKLYLGGT-FNDLAVFNPDTL 326 (349)
T ss_dssp TEEEEE---ESEEEEEETTTTE-EEEEEEC-S----SCCCEEEECSSSSCEEEESB-SSEEEEEETTTT
T ss_pred CEEEEE---cCeEEEEECccCe-EEEEEcC-C----CCccceEECCCCCEEEEecC-CCeEEEEecccc
Confidence 78877 7899999998873 4445543 2 248899999997 4777643 377888887654
No 114
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.35 E-value=8.9e-10 Score=99.91 Aligned_cols=166 Identities=16% Similarity=0.129 Sum_probs=105.7
Q ss_pred eeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEE
Q 039428 52 ETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALA 131 (335)
Q Consensus 52 egia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~ 131 (335)
.|+++.+++.+|++...+++|+++|..+++ ++. .+..+.. ..+.++++++++..+|++.. .. +.|.
T Consensus 3 ~g~~~~~~~~~~v~~~~~~~v~~~d~~~~~----~~~---~~~~~~~--~~~~~~~~s~dg~~~~v~~~--~~---~~i~ 68 (349)
T 1jmx_B 3 TGPALKAGHEYMIVTNYPNNLHVVDVASDT----VYK---SCVMPDK--FGPGTAMMAPDNRTAYVLNN--HY---GDIY 68 (349)
T ss_dssp -CCCCCTTCEEEEEEETTTEEEEEETTTTE----EEE---EEECSSC--CSSCEEEECTTSSEEEEEET--TT---TEEE
T ss_pred ccccccCCCEEEEEeCCCCeEEEEECCCCc----EEE---EEecCCC--CCCceeEECCCCCEEEEEeC--CC---CcEE
Confidence 477888887777777888999999965444 122 2222221 15789999985456888542 11 4699
Q ss_pred EEECCCCeEEEEeecCCC-ccCCCCCCceeECCCCc-EEEEeCC-----------CCeEEEEccCCcE-EEEecCCcccc
Q 039428 132 AYDLSTWKRLFLTQLSGK-SEEKSTADDIAVDAEGN-AYVTDVV-----------SSKIWKVGVEGQL-LSIIRSPLFTA 197 (335)
Q Consensus 132 ~~d~~~~~~~~~~~~~~~-~~~~~~p~~~~vd~~G~-lyV~d~~-----------~~~I~~~d~~g~~-~~~~~~~~~~~ 197 (335)
+||+++++.......... ......|++++++|+|+ +|++... .+.|+++|.++.. ...+ ..+..
T Consensus 69 ~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~--~~~~~ 146 (349)
T 1jmx_B 69 GIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV--RTFPM 146 (349)
T ss_dssp EEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS--EEEEC
T ss_pred EEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccccee--eeccC
Confidence 999999887755443210 00024588999999995 8887643 5799999976421 1100 00111
Q ss_pred ccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEE
Q 039428 198 KEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLI 243 (335)
Q Consensus 198 ~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~ 243 (335)
...+.+++++|||.+|++ ++.|+++|+..++ ....+
T Consensus 147 ------~~~~~~~~~s~dg~l~~~---~~~i~~~d~~~~~-~~~~~ 182 (349)
T 1jmx_B 147 ------PRQVYLMRAADDGSLYVA---GPDIYKMDVKTGK-YTVAL 182 (349)
T ss_dssp ------CSSCCCEEECTTSCEEEE---SSSEEEECTTTCC-EEEEE
T ss_pred ------CCcccceeECCCCcEEEc---cCcEEEEeCCCCc-eeccc
Confidence 124789999999998885 3349999987763 33344
No 115
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.34 E-value=1.9e-10 Score=106.31 Aligned_cols=196 Identities=12% Similarity=0.134 Sum_probs=127.1
Q ss_pred CcceEEEeCCCCeEEEEEecCC-C------CccceEEEEECCC--CeEEEEeecCC--CccCCCCCCceeECC--CC--c
Q 039428 102 ATMGIAVDRPRNRLLVAFTDVL-G------NKYSALAAYDLST--WKRLFLTQLSG--KSEEKSTADDIAVDA--EG--N 166 (335)
Q Consensus 102 ~p~Gi~~d~~~g~l~v~~~D~~-~------~~~~~v~~~d~~~--~~~~~~~~~~~--~~~~~~~p~~~~vd~--~G--~ 166 (335)
.|..|++++ +|.+|+++.... + ...+.|+++|+++ .+... ..+.+ .......|.|+.+.+ +| +
T Consensus 51 G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~-l~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 51 GSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSE-LEIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp CCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEE-CEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEE-EEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 567888886 788888652100 0 1125799999873 33321 11211 112246899999855 45 6
Q ss_pred EEEEeCCC--C--eEEEEccCCcEEEEecCCccccccccccccccCeEEEccCCeEEEEEC-----------------CC
Q 039428 167 AYVTDVVS--S--KIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHM-----------------CS 225 (335)
Q Consensus 167 lyV~d~~~--~--~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~-----------------~~ 225 (335)
+||++... . .|++++++++....+.. +.. ..+..||.++++++|.+|+++. ..
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~--~~g----~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~ 202 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKT--IRH----KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAW 202 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEE--ECC----TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCC
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEec--ccc----CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCc
Confidence 99998763 2 48888888776554432 111 1345699999999999999976 25
Q ss_pred CEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCC-cEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEE
Q 039428 226 GNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPT-KLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAA 304 (335)
Q Consensus 226 ~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g-~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~v 304 (335)
++|+++++.. .+.+. .+ +..|.|+++++|| .+||++...+.+++++..++++... ...+.. ...|.++
T Consensus 203 g~vyr~d~~~----~~~~~-~~---l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~-~~~~~~--~g~PDGi 271 (355)
T 3sre_A 203 SFVTYYSPND----VRVVA-EG---FDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTP-LRVLSF--DTLVDNI 271 (355)
T ss_dssp EEEEEECTTC----CEEEE-EE---ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE-EEEEEC--SSEEEEE
T ss_pred cEEEEEECCe----EEEee-cC---CcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEec-CEEEeC--CCCCceE
Confidence 7899999842 23332 22 5679999999998 6999987668888888754322211 122322 3568999
Q ss_pred EEe-C-CeEEEEec
Q 039428 305 TVK-D-GRVYLSHL 316 (335)
Q Consensus 305 a~~-~-g~lyV~~~ 316 (335)
+++ + |+|||+..
T Consensus 272 ~vD~e~G~lwva~~ 285 (355)
T 3sre_A 272 SVDPVTGDLWVGCH 285 (355)
T ss_dssp EECTTTCCEEEEEE
T ss_pred EEeCCCCcEEEEec
Confidence 997 4 99999654
No 116
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.34 E-value=7.8e-11 Score=108.57 Aligned_cols=202 Identities=17% Similarity=0.236 Sum_probs=126.4
Q ss_pred CCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCC-CccCCCCCCceeECCC----CcEEEEeC--C
Q 039428 101 NATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSG-KSEEKSTADDIAVDAE----GNAYVTDV--V 173 (335)
Q Consensus 101 ~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~p~~~~vd~~----G~lyV~d~--~ 173 (335)
..|.+|++.+ +|++||+ +... ++|++++.++++......++. ...+...+.||+++|+ |.+||+.+ .
T Consensus 32 ~~P~~ia~~p-dG~llVt--er~~---G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 32 NSPWGLAPLP-GGDLLVS--SRDE---ATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp SSEEEEEECT-TSCEEEE--ETTT---CEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred CCceEEEEcC-CCcEEEE--EecC---CEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 3789999997 7999995 3311 469999987665543222221 1123678999999985 78999753 5
Q ss_pred CCeEEEEccCCc---------EEEEecCCccccccccccccccCeEEEccCCeEEEEEC-------------CCCEEEEE
Q 039428 174 SSKIWKVGVEGQ---------LLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHM-------------CSGNLFKI 231 (335)
Q Consensus 174 ~~~I~~~d~~g~---------~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~-------------~~~~v~~~ 231 (335)
.++|.|+..++. ...++.. + | .......+.|+++|||+|||+.. ..++|+|+
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~--~--p--~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi 179 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRG--I--P--KGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRM 179 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEE--E--C--CCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEE
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEc--C--C--CCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEE
Confidence 679999987651 1121210 0 1 01223467899999999999953 36899999
Q ss_pred eCCCCc--e----eEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCC---eEEEEEcCCC--cEEEEEe---eeecCC-
Q 039428 232 DIRKEE--E----EVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYP---SARLVESSDG--WETASVV---AKFNGP- 296 (335)
Q Consensus 232 d~~~~~--~----~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~---~~~v~~~~~~--~~~~~~~---~~~~~p- 296 (335)
++++.- . ..+++.. | +..|.||++|++|.||+++++.+ .+..+..... |...+-. ..+..|
T Consensus 180 ~~dG~ip~~nPf~~~~i~a~-G---~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~ 255 (347)
T 3das_A 180 TPDGEPAPGNPFPGSPVYSY-G---HRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPV 255 (347)
T ss_dssp CTTSSBCTTCSSTTCCEEEB-C---CSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCS
T ss_pred eCCCCccCCCCCCCCeEEee-C---CCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCc
Confidence 998740 0 1134442 3 46799999999999999977432 3444432211 3211100 011111
Q ss_pred -----CCCcceEEEEeCCeEEEEeccC
Q 039428 297 -----THRVATAATVKDGRVYLSHLLG 318 (335)
Q Consensus 297 -----~~~~Pt~va~~~g~lyV~~~~~ 318 (335)
....|+++++-+|.+|+.+..+
T Consensus 256 ~~~~~~~~ap~G~~~~~g~~~~~~l~~ 282 (347)
T 3das_A 256 AQWSTDEASPSGIAYAEGSVWMAGLRG 282 (347)
T ss_dssp EEECTTTCCEEEEEEETTEEEEEESTT
T ss_pred EecCCCCCCCcceEEEcCceeeccccC
Confidence 1246889999888999876543
No 117
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.32 E-value=1.9e-09 Score=97.12 Aligned_cols=148 Identities=14% Similarity=0.067 Sum_probs=97.1
Q ss_pred EEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEE
Q 039428 62 RFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRL 141 (335)
Q Consensus 62 ~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~ 141 (335)
++++...+++|..+|..+++ ++. .+..+... ..|.++++++++..+|++..+ . ..|.+||+++++..
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~----~~~---~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~--~---~~v~~~d~~~~~~~ 69 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMA----VDK---VITIADAG-PTPMVPMVAPGGRIAYATVNK--S---ESLVKIDLVTGETL 69 (337)
T ss_dssp EEEEEETTTEEEEEETTTTE----EEE---EEECTTCT-TCCCCEEECTTSSEEEEEETT--T---TEEEEEETTTCCEE
T ss_pred EEEEcCCCCeEEEEECCCCc----EEE---EEEcCCCC-CCccceEEcCCCCEEEEEeCC--C---CeEEEEECCCCCeE
Confidence 45555778999999965443 122 22222100 047899999855578885432 1 46999999988876
Q ss_pred EEeecCCCccCCCCCCceeECCCC-cEEEEeC-----------CCCeEEEEccCCcEE-EEecCCccccccccccccccC
Q 039428 142 FLTQLSGKSEEKSTADDIAVDAEG-NAYVTDV-----------VSSKIWKVGVEGQLL-SIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 142 ~~~~~~~~~~~~~~p~~~~vd~~G-~lyV~d~-----------~~~~I~~~d~~g~~~-~~~~~~~~~~~~~~~~~~~p~ 208 (335)
.......+......|.+++++++| .+|+++. ..+.|+++|.++... ..+. ....++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~-----------~~~~~~ 138 (337)
T 1pby_B 70 GRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE-----------APRQIT 138 (337)
T ss_dssp EEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE-----------CCSSCC
T ss_pred eeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe-----------CCCCcc
Confidence 544442111002368899999998 5888852 358999999876443 2221 123488
Q ss_pred eEEEccCC-eEEEEECCCCEEEEEeCCCC
Q 039428 209 GIVYHPDG-FLIVIHMCSGNLFKIDIRKE 236 (335)
Q Consensus 209 Gia~~~dg-~Lyvad~~~~~v~~~d~~~~ 236 (335)
+++++||| +||++ ++.|+++|+.++
T Consensus 139 ~~~~s~dg~~l~~~---~~~i~~~d~~~~ 164 (337)
T 1pby_B 139 MLAWARDGSKLYGL---GRDLHVMDPEAG 164 (337)
T ss_dssp CEEECTTSSCEEEE---SSSEEEEETTTT
T ss_pred eeEECCCCCEEEEe---CCeEEEEECCCC
Confidence 99999999 68888 467888888765
No 118
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.31 E-value=6.5e-10 Score=104.98 Aligned_cols=207 Identities=17% Similarity=0.112 Sum_probs=130.7
Q ss_pred ceeeeEEcCCCCEEEEEecC------CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCC
Q 039428 50 LCETAKWDDVGRRFLVSFLD------GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVL 123 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~------~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~ 123 (335)
.|.++.+.|+| +|+....+ +.|.++|..+.+ ++. ++. .+......+..+-+.++.+.+|+ ++..
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~----v~~--~~~-~~~~~~~~~Yd~~~~p~~~~mvs--S~wg 208 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE----PLG--KWE-IDRGDQYLAYDFWWNLPNEVLVS--SEWA 208 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC----EEE--ECC-SBCTTCCCCCCEEEETTTTEEEE--CBCC
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe----EEE--EEc-cCCCCccccceEEECCCCCEEEE--ccCc
Confidence 79999999999 66544444 789999964343 233 131 11111123455777885555555 3321
Q ss_pred -----------C----CccceEEEEECCCCeEEEEeecCCCccCCCCCCceeE--CCCCc-EEEEeC-----CCCeEEEE
Q 039428 124 -----------G----NKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAV--DAEGN-AYVTDV-----VSSKIWKV 180 (335)
Q Consensus 124 -----------~----~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~v--d~~G~-lyV~d~-----~~~~I~~~ 180 (335)
. ...++|.+||.+++++...+++..+ ...|..+.+ +|+|+ +||+.. .++.|+++
T Consensus 209 ~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~---g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~ 285 (462)
T 2ece_A 209 VPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE---NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLW 285 (462)
T ss_dssp CHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT---EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEE
T ss_pred CccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC---CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEE
Confidence 0 0125799999999887766666321 356778877 99985 999998 88899887
Q ss_pred ccCCcEEE---EecCCc--ccc--ccc----cccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCc--eeEEEEecc
Q 039428 181 GVEGQLLS---IIRSPL--FTA--KEW----YKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEE--EEVKLIELR 246 (335)
Q Consensus 181 d~~g~~~~---~~~~~~--~~~--~~~----~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~--~~~~~~~~~ 246 (335)
..++.... ++.-+. ... |.. ......|.+|.+++|| +|||++...+.|.+||+.... ..+..+...
T Consensus 286 ~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tG 365 (462)
T 2ece_A 286 FYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLG 365 (462)
T ss_dssp EEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECB
T ss_pred EecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeC
Confidence 66532211 111010 000 000 0012458999999999 999999999999999986331 144556554
Q ss_pred CC----------cCCCCCCeEEEcCCC-cEEEEe
Q 039428 247 GG----------SSLSLGDGLALLSPT-KLVVAG 269 (335)
Q Consensus 247 g~----------~~~~~pdGia~d~~g-~l~va~ 269 (335)
|. .....|.+++++++| .|||++
T Consensus 366 G~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 366 GIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 31 111369999999998 599998
No 119
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.28 E-value=3e-09 Score=98.64 Aligned_cols=106 Identities=12% Similarity=0.072 Sum_probs=71.0
Q ss_pred CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEec----CCCCccceEEEEECCCCeEEEEe
Q 039428 69 DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTD----VLGNKYSALAAYDLSTWKRLFLT 144 (335)
Q Consensus 69 ~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D----~~~~~~~~v~~~d~~~~~~~~~~ 144 (335)
++.|++||..+++ ++. .+.. +..| ++++++++..+|+++.. ..+...+.|.+||.++++....+
T Consensus 30 d~~v~v~D~~t~~----~~~---~i~~----g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i 97 (361)
T 2oiz_A 30 ESRVHVYDYTNGK----FLG---MVPT----AFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEI 97 (361)
T ss_dssp GCEEEEEETTTCC----EEE---EEEC----CEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEE
T ss_pred cCeEEEEECCCCe----EEE---EecC----CCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEE
Confidence 5699999965454 222 2211 2367 99999977889997531 01111246999999988777555
Q ss_pred ecCCC-ccCCCCCCceeECCCCc-EEEEeCC-CCeEEEEccCCcE
Q 039428 145 QLSGK-SEEKSTADDIAVDAEGN-AYVTDVV-SSKIWKVGVEGQL 186 (335)
Q Consensus 145 ~~~~~-~~~~~~p~~~~vd~~G~-lyV~d~~-~~~I~~~d~~g~~ 186 (335)
.+... ......|.+++++|||+ +|+++.. .+.|.+||.+...
T Consensus 98 ~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~ 142 (361)
T 2oiz_A 98 SLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGD 142 (361)
T ss_dssp EECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTE
T ss_pred EcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCc
Confidence 44211 11136799999999985 9999875 6899999987543
No 120
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.25 E-value=2.8e-10 Score=106.02 Aligned_cols=231 Identities=12% Similarity=-0.017 Sum_probs=131.3
Q ss_pred CEEEEEecCC----eEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecC----CCCccceEEE
Q 039428 61 RRFLVSFLDG----GVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDV----LGNKYSALAA 132 (335)
Q Consensus 61 ~~~~~~~~~~----~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~----~~~~~~~v~~ 132 (335)
.+|+.+...+ +|.++|..+.+ ++. .+ + .+..| |++++++...+||++... .+.+.+.|.+
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~----v~~---~i--~--vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~Vsv 100 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGV----TLG---HS--L--GAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEV 100 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTE----EEE---EE--E--ECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEE
T ss_pred eEEEECCccCCccceEEEEECCCCe----EEE---EE--e--CCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 3444445555 89999964443 333 22 1 12367 999999888999986321 1111257999
Q ss_pred EECCCCeEEEEeecCCCcc--CCCCCCceeECCCC-cEEEEeCC-CCeEEE--EccCCcEEEEecCCc-c-cccc-----
Q 039428 133 YDLSTWKRLFLTQLSGKSE--EKSTADDIAVDAEG-NAYVTDVV-SSKIWK--VGVEGQLLSIIRSPL-F-TAKE----- 199 (335)
Q Consensus 133 ~d~~~~~~~~~~~~~~~~~--~~~~p~~~~vd~~G-~lyV~d~~-~~~I~~--~d~~g~~~~~~~~~~-~-~~~~----- 199 (335)
||+.++++...+.++.... ....|.+++++||| .+||++.. .+.|.+ +|+.. ...+..+. + ..|.
T Consensus 101 iD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~~~~~~~p~g~~~~ 178 (368)
T 1mda_H 101 FDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSASCFHIHPGAAATH 178 (368)
T ss_dssp ECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECSSCCCCEEEETTEE
T ss_pred EECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECCCceEEccCCCeEE
Confidence 9999999886665531110 12579999999998 59999875 677888 88865 22221100 0 0000
Q ss_pred ---------------c---------------cccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCc-eeEEEEeccC
Q 039428 200 ---------------W---------------YKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEE-EEVKLIELRG 247 (335)
Q Consensus 200 ---------------~---------------~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~-~~~~~~~~~g 247 (335)
. ......|. + .+++ .+|+... +.|+.+|..+.+ .....+.+..
T Consensus 179 ~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~--~~V~viD~~~~~~~v~~~~~~~~ 253 (368)
T 1mda_H 179 YLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA--SSILQGDIPAAGATMKAAIDGNE 253 (368)
T ss_dssp ECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS--SCCEEEECCSSCCEEECCCCSSC
T ss_pred EEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC--CEEEEEECCCCcceEEEEEEecc
Confidence 0 00011222 3 3333 5555554 788888886541 0111122110
Q ss_pred C---cCCCCCCe---EEEcCCC-cEEEEec---C-----CCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe-CC-e
Q 039428 248 G---SSLSLGDG---LALLSPT-KLVVAGN---P-----YPSARLVESSDGWETASVVAKFNGPTHRVATAATVK-DG-R 310 (335)
Q Consensus 248 ~---~~~~~pdG---ia~d~~g-~l~va~~---~-----~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~-~g-~ 310 (335)
. ..-..|.| ++++++| ++||+.. + .+...|++.... +++.++. .+..|.++++. +| +
T Consensus 254 ~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~----~vv~~i~--vg~~p~gi~~s~Dg~~ 327 (368)
T 1mda_H 254 SGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG----QTSGPIS--NGHDSDAIIAAQDGAS 327 (368)
T ss_dssp THHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC----CEEECCE--EEEEECEEEECCSSSC
T ss_pred ccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC----eEEEEEE--CCCCcceEEECCCCCE
Confidence 0 00012555 8899986 6999854 3 345668887654 3344442 23358899995 44 5
Q ss_pred EEEEec
Q 039428 311 VYLSHL 316 (335)
Q Consensus 311 lyV~~~ 316 (335)
+||+..
T Consensus 328 l~va~~ 333 (368)
T 1mda_H 328 DNYANS 333 (368)
T ss_dssp EEEEEE
T ss_pred EEEEcc
Confidence 998766
No 121
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.21 E-value=7.8e-09 Score=93.29 Aligned_cols=214 Identities=12% Similarity=0.138 Sum_probs=135.1
Q ss_pred eeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEE
Q 039428 53 TAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAA 132 (335)
Q Consensus 53 gia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~ 132 (335)
.++++ +++ +|+...++.|+++|+. ++. . +..... ......+.+++ ++++|+++.+ ..|+.
T Consensus 102 ~~~~~-~~~-l~v~t~~~~l~~~d~~-g~~----~----~~~~~~--~~~~~~~~~~~-~g~l~vgt~~------~~l~~ 161 (330)
T 3hxj_A 102 DFTIF-EDI-LYVTSMDGHLYAINTD-GTE----K----WRFKTK--KAIYATPIVSE-DGTIYVGSND------NYLYA 161 (330)
T ss_dssp CEEEE-TTE-EEEECTTSEEEEECTT-SCE----E----EEEECS--SCCCSCCEECT-TSCEEEECTT------SEEEE
T ss_pred CceEE-CCE-EEEEecCCEEEEEcCC-CCE----E----EEEcCC--CceeeeeEEcC-CCEEEEEcCC------CEEEE
Confidence 34554 444 5555567899999854 541 1 211111 11345667775 7899995321 35999
Q ss_pred EECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCeEEE
Q 039428 133 YDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVY 212 (335)
Q Consensus 133 ~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~ 212 (335)
+|++ ++..+..... ......+.+|++|++|++. +.|+++|++|+....... ......++++
T Consensus 162 ~d~~-g~~~~~~~~~-----~~~~~~~~~d~~g~l~v~t---~~l~~~d~~g~~~~~~~~----------~~~~~~~~~~ 222 (330)
T 3hxj_A 162 INPD-GTEKWRFKTN-----DAITSAASIGKDGTIYFGS---DKVYAINPDGTEKWNFYA----------GYWTVTRPAI 222 (330)
T ss_dssp ECTT-SCEEEEEECS-----SCCCSCCEECTTCCEEEES---SSEEEECTTSCEEEEECC----------SSCCCSCCEE
T ss_pred ECCC-CCEeEEEecC-----CCceeeeEEcCCCEEEEEe---CEEEEECCCCcEEEEEcc----------CCcceeceEE
Confidence 9998 7666554432 2355678999999999986 889999987766542211 1123778899
Q ss_pred ccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEeee
Q 039428 213 HPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETASVVAK 292 (335)
Q Consensus 213 ~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~ 292 (335)
+++|.||++.. ++.|++++.++. ....+.... ..+..+.++++|++|++... +.+..++. ++- ....
T Consensus 223 ~~~g~l~v~t~-~~gl~~~~~~g~--~~~~~~~~~----~~~~~~~~~~~g~l~v~t~~-ggl~~~d~-~g~----~~~~ 289 (330)
T 3hxj_A 223 SEDGTIYVTSL-DGHLYAINPDGT--EKWRFKTGK----RIESSPVIGNTDTIYFGSYD-GHLYAINP-DGT----EKWN 289 (330)
T ss_dssp CTTSCEEEEET-TTEEEEECTTSC--EEEEEECSS----CCCSCCEECTTSCEEEECTT-CEEEEECT-TSC----EEEE
T ss_pred CCCCeEEEEcC-CCeEEEECCCCC--EeEEeeCCC----CccccceEcCCCeEEEecCC-CCEEEECC-CCc----EEEE
Confidence 99999999875 567999987665 444454322 23556888889999999662 46777764 331 1112
Q ss_pred ecCCCCCcceEEEEe-CCeEEEEeccCC
Q 039428 293 FNGPTHRVATAATVK-DGRVYLSHLLGL 319 (335)
Q Consensus 293 ~~~p~~~~Pt~va~~-~g~lyV~~~~~~ 319 (335)
+..+ .....++.++ +|+|||....|.
T Consensus 290 ~~~~-~~~~~~~~~d~~g~l~~gt~~G~ 316 (330)
T 3hxj_A 290 FETG-SWIIATPVIDENGTIYFGTRNGK 316 (330)
T ss_dssp EECS-SCCCSCCEECTTCCEEEECTTSC
T ss_pred EEcC-CccccceEEcCCCEEEEEcCCCe
Confidence 2222 1223456674 899999765544
No 122
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.21 E-value=2.2e-09 Score=100.26 Aligned_cols=121 Identities=14% Similarity=0.026 Sum_probs=82.2
Q ss_pred EEcCCCCEEEEE-ec----CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecC----CCC
Q 039428 55 KWDDVGRRFLVS-FL----DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDV----LGN 125 (335)
Q Consensus 55 a~d~~g~~~~~~-~~----~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~----~~~ 125 (335)
+..|+++.+|+. .. .++|+++|..+.+ ++. .+ + .|..|+ ++++|++..+||++.-. .+.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~----v~~---~I--~--vG~~P~-va~spDG~~lyVan~~~~r~~~G~ 106 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGR----VIG---MI--D--GGFLPN-PVVADDGSFIAHASTVFSRIARGE 106 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTE----EEE---EE--E--ECSSCE-EEECTTSSCEEEEEEEEEETTEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCe----EEE---EE--E--CCCCCc-EEECCCCCEEEEEcccccccccCC
Confidence 346888888888 43 5799999964443 333 22 1 123575 99999778899975210 011
Q ss_pred ccceEEEEECCCCeEEEEeecCC--CccCCCCCCceeECCCCc-EEEEeCC-CCeEEEEccCCcEE
Q 039428 126 KYSALAAYDLSTWKRLFLTQLSG--KSEEKSTADDIAVDAEGN-AYVTDVV-SSKIWKVGVEGQLL 187 (335)
Q Consensus 126 ~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~p~~~~vd~~G~-lyV~d~~-~~~I~~~d~~g~~~ 187 (335)
..+.|.+||.+++++...+.++. ..+....|.++++++||+ +||++.. .+.|.++|......
T Consensus 107 ~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 107 RTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF 172 (386)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred CCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE
Confidence 11469999999998876555421 001135899999999995 9999864 78999999986543
No 123
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.20 E-value=1e-10 Score=112.09 Aligned_cols=155 Identities=12% Similarity=0.143 Sum_probs=103.8
Q ss_pred CCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCc---cCCCCCCceeECC----CCcEEEEeCC
Q 039428 101 NATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKS---EEKSTADDIAVDA----EGNAYVTDVV 173 (335)
Q Consensus 101 ~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~---~~~~~p~~~~vd~----~G~lyV~d~~ 173 (335)
..|.+|++++ +|+|||+ +..+ .+|++++..+++......+.... .+...+.||+++| +|.+||+.+.
T Consensus 27 ~~P~~~a~~p-dG~l~V~--e~~g---g~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~ 100 (454)
T 1cru_A 27 NKPHALLWGP-DNQIWLT--ERAT---GKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTF 100 (454)
T ss_dssp SSEEEEEECT-TSCEEEE--ETTT---CEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred CCceEEEEcC-CCcEEEE--EcCC---CEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEec
Confidence 3789999997 8999995 4432 25999988666554333332210 1245677999999 6889999864
Q ss_pred ------------CCeEEEEccCC---cE---EEEecCCccccccccccccccCeEEEccCCeEEEEECC-----------
Q 039428 174 ------------SSKIWKVGVEG---QL---LSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMC----------- 224 (335)
Q Consensus 174 ------------~~~I~~~d~~g---~~---~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~----------- 224 (335)
..+|+|++.+. +. ..++.. + | ......+++|++++||+|||+...
T Consensus 101 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~--~--p--~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~ 174 (454)
T 1cru_A 101 KNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAG--L--P--SSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFL 174 (454)
T ss_dssp ECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEE--E--C--CCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTS
T ss_pred cccCCCccccccccEEEEEEECCCCCCcCCcEEEEEc--C--C--CCCCCCCCeEeECCCCeEEEEECCCCCCCcccccc
Confidence 46899998642 11 112210 1 1 012345899999999999998542
Q ss_pred ---------------------CCEEEEEeCCCCc--e-------eEEEEeccCCcCCCCCCeEEEcCCCcEEEEecC
Q 039428 225 ---------------------SGNLFKIDIRKEE--E-------EVKLIELRGGSSLSLGDGLALLSPTKLVVAGNP 271 (335)
Q Consensus 225 ---------------------~~~v~~~d~~~~~--~-------~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~ 271 (335)
.++|+|+++++.- . ..+++.. | +..|.||++|++|+||+++.+
T Consensus 175 ~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~-G---~RNp~gla~dp~G~L~~~d~g 247 (454)
T 1cru_A 175 PNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTL-G---HRNPQGLAFTPNGKLLQSEQG 247 (454)
T ss_dssp CCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEB-C---CSEEEEEEECTTSCEEEEEEC
T ss_pred ccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEE-C---CCCcceEEECCCCCEEEEecC
Confidence 4789999998741 0 1234443 3 467999999999999999764
No 124
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.17 E-value=6e-09 Score=106.22 Aligned_cols=237 Identities=13% Similarity=0.089 Sum_probs=145.7
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceE
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSAL 130 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v 130 (335)
..+++.|++|++|+.+ ..+.|+++++.+++ +. ....+.........|..|+ +|+||+++. ..|
T Consensus 409 v~~i~~d~~g~lWigt-~~~Gl~~~~~~~~~-----~~---~~~~~~~~~~~v~~i~~d~-~g~lwigt~-------~Gl 471 (781)
T 3v9f_A 409 VLCSLKDSEGNLWFGT-YLGNISYYNTRLKK-----FQ---IIELEKNELLDVRVFYEDK-NKKIWIGTH-------AGV 471 (781)
T ss_dssp EEEEEECTTSCEEEEE-TTEEEEEECSSSCE-----EE---ECCSTTTCCCCEEEEEECT-TSEEEEEET-------TEE
T ss_pred eEEEEECCCCCEEEEe-ccCCEEEEcCCCCc-----EE---EeccCCCCCCeEEEEEECC-CCCEEEEEC-------Cce
Confidence 4577888888877654 45689999854343 22 2211122224567888885 899999643 249
Q ss_pred EEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCC-ccccccccccccccCe
Q 039428 131 AAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSP-LFTAKEWYKNVFGLNG 209 (335)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~-~~~~~~~~~~~~~p~G 209 (335)
.++|+++++.................+.+..|++|++|++... +.|++++++++....+... .+ .......
T Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~-~Gl~~~~~~~~~~~~~~~~~~l-------~~~~i~~ 543 (781)
T 3v9f_A 472 FVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG-GGVGIYTPDMQLVRKFNQYEGF-------CSNTINQ 543 (781)
T ss_dssp EEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS-SCEEEECTTCCEEEEECTTTTC-------SCSCEEE
T ss_pred EEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC-CCEEEEeCCCCeEEEccCCCCC-------CCCeeEE
Confidence 9999988765432222111111356678999999999998653 4599999987655533211 01 0123578
Q ss_pred EEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEE
Q 039428 210 IVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETASV 289 (335)
Q Consensus 210 ia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~ 289 (335)
|+.+++|+||++.. .|-|+++|+..+ ..+.+....+-.-....++..|++|+||++.. +++..++...+ +. ..
T Consensus 544 i~~d~~g~lWi~T~-~Glv~~~d~~~~--~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~--~Gl~~~~~~~~-~~-~~ 616 (781)
T 3v9f_A 544 IYRSSKGQMWLATG-EGLVCFPSARNF--DYQVFQRKEGLPNTHIRAISEDKNGNIWASTN--TGISCYITSKK-CF-YT 616 (781)
T ss_dssp EEECTTSCEEEEET-TEEEEESCTTTC--CCEEECGGGTCSCCCCCEEEECSSSCEEEECS--SCEEEEETTTT-EE-EE
T ss_pred EEECCCCCEEEEEC-CCceEEECCCCC--cEEEccccCCCCCceEEEEEECCCCCEEEEcC--CceEEEECCCC-ce-EE
Confidence 89999999999976 554499998876 44555432111112357899999999999976 56777775443 11 11
Q ss_pred eeeec-CCCCCc-ceEEEEe-CCeEEEEeccCC
Q 039428 290 VAKFN-GPTHRV-ATAATVK-DGRVYLSHLLGL 319 (335)
Q Consensus 290 ~~~~~-~p~~~~-Pt~va~~-~g~lyV~~~~~~ 319 (335)
..... .+...+ +.++..+ +|+||+....|.
T Consensus 617 ~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~Gl 649 (781)
T 3v9f_A 617 YDHSNNIPQGSFISGCVTKDHNGLIYFGSINGL 649 (781)
T ss_dssp ECGGGTCCSSCEEEEEEEECTTSCEEEEETTEE
T ss_pred ecccCCccccccccCceEECCCCEEEEECCCce
Confidence 21111 121111 2344454 899999665443
No 125
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.16 E-value=2e-07 Score=84.59 Aligned_cols=227 Identities=12% Similarity=0.133 Sum_probs=148.8
Q ss_pred CCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCC
Q 039428 46 SPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGN 125 (335)
Q Consensus 46 ~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~ 125 (335)
+....-.++++++++.+++.+..++.|..||..+++. +. .+.... .....++++| +++.+++.. ..
T Consensus 78 gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~----~~---~~~~~~---~~~~~~~~sp-dg~~l~~g~-~d-- 143 (321)
T 3ow8_A 78 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ----IK---SIDAGP---VDAWTLAFSP-DSQYLATGT-HV-- 143 (321)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE----EE---EEECCT---TCCCCEEECT-TSSEEEEEC-TT--
T ss_pred cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCE----EE---EEeCCC---ccEEEEEECC-CCCEEEEEc-CC--
Confidence 3334457889999998887778899999999654541 21 222211 2456899998 565555422 21
Q ss_pred ccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCc-EEEEecCCccccccccccc
Q 039428 126 KYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAKEWYKNV 204 (335)
Q Consensus 126 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~~~~~~~ 204 (335)
+.|..||.++++....... . ......++++|+|+..++.+..+.|..+|.... ....+.. ..
T Consensus 144 --g~v~i~~~~~~~~~~~~~~--~---~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~----------h~ 206 (321)
T 3ow8_A 144 --GKVNIFGVESGKKEYSLDT--R---GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG----------HA 206 (321)
T ss_dssp --SEEEEEETTTCSEEEEEEC--S---SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC----------CS
T ss_pred --CcEEEEEcCCCceeEEecC--C---CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc----------cC
Confidence 4699999988876643332 1 245678999999998888888899999998644 3332321 11
Q ss_pred cccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCc
Q 039428 205 FGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGW 284 (335)
Q Consensus 205 ~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~ 284 (335)
...+.++++|++.++++-..++.|..+|....+ ....+. + . ......+++.++|.++++....+.+++.+...+
T Consensus 207 ~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~-~~~~~~--~-h-~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~- 280 (321)
T 3ow8_A 207 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN-LAGTLS--G-H-ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR- 280 (321)
T ss_dssp SCCCEEEECTTSCEEEEECTTSCEEEEETTTCC-EEEEEC--C-C-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-
T ss_pred CceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc-eeEEEc--C-C-CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-
Confidence 236899999999888888889999999998763 333443 2 1 133578999999987777555577888887654
Q ss_pred EEEEEeeeecCCCCCcceEEEEe-CCeEEE
Q 039428 285 ETASVVAKFNGPTHRVATAATVK-DGRVYL 313 (335)
Q Consensus 285 ~~~~~~~~~~~p~~~~Pt~va~~-~g~lyV 313 (335)
+....+... ....+++++. +++..+
T Consensus 281 ---~~~~~~~~h-~~~v~~v~~s~~g~~l~ 306 (321)
T 3ow8_A 281 ---TCVHTFFDH-QDQVWGVKYNGNGSKIV 306 (321)
T ss_dssp ---EEEEEECCC-SSCEEEEEECTTSSEEE
T ss_pred ---EEEEEEcCC-CCcEEEEEECCCCCEEE
Confidence 223333222 1223567774 555444
No 126
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.14 E-value=2.6e-09 Score=104.12 Aligned_cols=239 Identities=10% Similarity=-0.017 Sum_probs=149.2
Q ss_pred cceeeeEE-c-CCCCEEEEEe------------------cCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEE
Q 039428 49 FLCETAKW-D-DVGRRFLVSF------------------LDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAV 108 (335)
Q Consensus 49 ~~pegia~-d-~~g~~~~~~~------------------~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~ 108 (335)
.-|+|+++ . |+++.+|++. ..+.+.++|.. .. +++.+ + .-+ ..|.++++
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~-t~---~v~~q--I-~Vg----g~pd~~~~ 202 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDAD-KW---EVAWQ--V-LVS----GNLDNCDA 202 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETT-TT---EEEEE--E-EES----SCCCCEEE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECC-CC---eEEEE--E-EeC----CCccceEE
Confidence 35999998 4 8998888882 23579999964 33 12322 1 112 26889999
Q ss_pred eCCCCeEEEEEecCCC------------C-----------------c---cceEEEEECCC--CeE-EEEeecCCCccCC
Q 039428 109 DRPRNRLLVAFTDVLG------------N-----------------K---YSALAAYDLST--WKR-LFLTQLSGKSEEK 153 (335)
Q Consensus 109 d~~~g~l~v~~~D~~~------------~-----------------~---~~~v~~~d~~~--~~~-~~~~~~~~~~~~~ 153 (335)
+++++.+|+++.++.. + + -+.|.++|.++ ++. ...++. .
T Consensus 203 spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv------g 276 (595)
T 1fwx_A 203 DYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI------A 276 (595)
T ss_dssp CSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE------E
T ss_pred CCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec------C
Confidence 9988889998744311 0 0 13477788776 433 333332 3
Q ss_pred CCCCceeECCCCc-EEEEeCCCCeEEEEccCCcEEEEecC---CccccccccccccccCeEEEccCCeEEEEECCCCEEE
Q 039428 154 STADDIAVDAEGN-AYVTDVVSSKIWKVGVEGQLLSIIRS---PLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLF 229 (335)
Q Consensus 154 ~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g~~~~~~~~---~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~ 229 (335)
..|.++.++|||+ +||++...++|.++|.+..... +.. +....-...+.+.+|.+++|++||++|++...+++|.
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~-~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~ 355 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAV-FYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVV 355 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHH-HHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEE
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccc-cccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEE
Confidence 5899999999996 9999999999999998743100 000 0000000123456799999999999999999999999
Q ss_pred EEeCCC----------CceeEEEEeccCC--cCCCCCCeEEEcCCCc-EEEEecCC-CeE-----------EEEEcCCCc
Q 039428 230 KIDIRK----------EEEEVKLIELRGG--SSLSLGDGLALLSPTK-LVVAGNPY-PSA-----------RLVESSDGW 284 (335)
Q Consensus 230 ~~d~~~----------~~~~~~~~~~~g~--~~~~~pdGia~d~~g~-l~va~~~~-~~~-----------~v~~~~~~~ 284 (335)
+++++. .+ .+..++..-+ + .....|+++.+||+ ||++|..+ ++. .+++...+
T Consensus 356 kwdi~~a~~~~~g~~~~~-vi~kidV~yqpGh-~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~- 432 (595)
T 1fwx_A 356 KWNIEDAIRAYAGEKVDP-IKDKLDVHYQPGH-LKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGD- 432 (595)
T ss_dssp EEEHHHHHHHHHTCSCCC-EEEEEECSSCEEE-EEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSS-
T ss_pred EEEhhHhhhhhcccccce-eEEEeeccccccc-ceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCC-
Confidence 999876 22 4555554210 1 12347888899996 66666655 444 66776433
Q ss_pred EEEEEeeeecCCCCCcceEEEEe-CCeE
Q 039428 285 ETASVVAKFNGPTHRVATAATVK-DGRV 311 (335)
Q Consensus 285 ~~~~~~~~~~~p~~~~Pt~va~~-~g~l 311 (335)
+ .+++... |.+..|..+.+. ...|
T Consensus 433 ~-m~lv~d~--p~~~ePh~~~i~~~~~~ 457 (595)
T 1fwx_A 433 K-MVLVHDG--PTFAEPHDAIAVHPSIL 457 (595)
T ss_dssp S-CEEEEEE--EESSCCCCEEEECTTTT
T ss_pred c-EEEEEEE--cCCCCCCceEEccHHHc
Confidence 1 2233222 224446666664 4433
No 127
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.13 E-value=6e-08 Score=86.99 Aligned_cols=194 Identities=12% Similarity=0.049 Sum_probs=131.7
Q ss_pred CcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 48 SFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
.....+++|+++++.+++...++.|..||..+++ .+. .+.... .....+++++++..|+++..|
T Consensus 141 ~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~----~~~---~~~~~~---~~i~~~~~~~~~~~l~~~~~d------ 204 (337)
T 1gxr_A 141 APACYALAISPDSKVCFSCCSDGNIAVWDLHNQT----LVR---QFQGHT---DGASCIDISNDGTKLWTGGLD------ 204 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE----EEE---EECCCS---SCEEEEEECTTSSEEEEEETT------
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc----eee---eeeccc---CceEEEEECCCCCEEEEEecC------
Confidence 3345789999999988888888999999965443 111 221111 356889999844444443222
Q ss_pred ceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCcccccccccccccc
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGL 207 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p 207 (335)
+.|..||.++++....... ......++++++|+.+++....+.|..++.+......+.. .....
T Consensus 205 g~i~~~d~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~----------~~~~v 268 (337)
T 1gxr_A 205 NTVRSWDLREGRQLQQHDF------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL----------HESCV 268 (337)
T ss_dssp SEEEEEETTTTEEEEEEEC------SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECC----------CSSCE
T ss_pred CcEEEEECCCCceEeeecC------CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcC----------Cccce
Confidence 3699999998877644432 2346789999999877777788899999987654332211 11237
Q ss_pred CeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEE
Q 039428 208 NGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVE 279 (335)
Q Consensus 208 ~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~ 279 (335)
..++++|++.++++-..++.|..++...++ ....... . .....+++.++++++++....+.+++.+
T Consensus 269 ~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~-~~~~~~~-~----~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 269 LSLKFAYCGKWFVSTGKDNLLNAWRTPYGA-SIFQSKE-S----SSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCC-EEEEEEC-S----SCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred eEEEECCCCCEEEEecCCCcEEEEECCCCe-EEEEecC-C----CcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 899999999777777788999999998874 3322221 1 2367899999998777654445666654
No 128
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.12 E-value=3.6e-07 Score=81.82 Aligned_cols=199 Identities=15% Similarity=0.088 Sum_probs=134.0
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
....+++|+++++.+++...++.|..||..+++. ... ....... .....+++++++..++++..| +
T Consensus 98 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~----~~~-~~~~~~~---~~i~~~~~~~~~~~l~~~~~d------g 163 (337)
T 1gxr_A 98 NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP----RIK-AELTSSA---PACYALAISPDSKVCFSCCSD------G 163 (337)
T ss_dssp SBEEEEEECTTSSEEEEEESSSEEEEEECCCC------EEE-EEEECSS---SCEEEEEECTTSSEEEEEETT------S
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCc----cee-eecccCC---CceEEEEECCCCCEEEEEeCC------C
Confidence 3467899999999888888889999998644431 010 1111111 246789999744445543222 3
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcE-EEEecCCcccccccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQL-LSIIRSPLFTAKEWYKNVFGL 207 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~-~~~~~~~~~~~~~~~~~~~~p 207 (335)
.|..||.++++....... . ......++++++|+.+++....+.|..+|..... ...+. . ....
T Consensus 164 ~v~~~d~~~~~~~~~~~~--~---~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---~--------~~~v 227 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQG--H---TDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD---F--------TSQI 227 (337)
T ss_dssp CEEEEETTTTEEEEEECC--C---SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---C--------SSCE
T ss_pred cEEEEeCCCCceeeeeec--c---cCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec---C--------CCce
Confidence 599999998876643322 1 3456789999999888887888999999987543 32221 1 1236
Q ss_pred CeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 208 NGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 208 ~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
..++++|++.++++...++.|..++.... ....+... ......+++.++++++++....+.+++.+...+
T Consensus 228 ~~~~~s~~~~~l~~~~~~~~i~~~~~~~~--~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKP--DKYQLHLH----ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTSS--CEEEECCC----SSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCC--CeEEEcCC----ccceeEEEECCCCCEEEEecCCCcEEEEECCCC
Confidence 78999999966666667889999999887 33333221 134678999999987777554577888887655
No 129
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.09 E-value=3e-08 Score=101.26 Aligned_cols=239 Identities=12% Similarity=0.119 Sum_probs=143.7
Q ss_pred eeeeEEcCCCC-EEEEEecCCeEEEEECCCCCCCcceeeeeEEee-cCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 51 CETAKWDDVGR-RFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVK-EDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 51 pegia~d~~g~-~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~-~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
..+++.|++|+ +|+ +...+.|+++|+.+++ +.. +.. .+.........|..|+ +|+||+++. .
T Consensus 408 v~~i~~d~~g~~lWi-gt~~~Gl~~~d~~~~~-----~~~--~~~~~~~l~~~~v~~i~~d~-~g~lwigt~-------~ 471 (795)
T 4a2l_A 408 IKAVYVDEKKSLVYI-GTHAGGLSILHRNSGQ-----VEN--FNQRNSQLVNENVYAILPDG-EGNLWLGTL-------S 471 (795)
T ss_dssp EEEEEEETTTTEEEE-EETTTEEEEEETTTCC-----EEE--ECTTTSCCSCSCEEEEEECS-SSCEEEEES-------S
T ss_pred EEEEEEcCCCCEEEE-EeCcCceeEEeCCCCc-----EEE--eecCCCCcCCCeeEEEEECC-CCCEEEEec-------C
Confidence 45778899998 555 4456789999965444 221 211 1122234567888885 899999643 2
Q ss_pred eEEEEECCCCeEEEEeecCCC-ccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCcccccccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGK-SEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGL 207 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~-~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p 207 (335)
.|.+||+++++.........+ .........+..|++|++|++.. +.|+++++++.... +... ...+. ......
T Consensus 472 Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~~-~~~~-~~~~~--l~~~~i 545 (795)
T 4a2l_A 472 ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDIQ-KASI-LPVSN--VTKLFT 545 (795)
T ss_dssp CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEEE-ECCC-SCSCG--GGGSCE
T ss_pred ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeEE-EecC-CCCCC--CCCCee
Confidence 399999998866532111000 11124567889999999999876 57999998765442 2110 00000 011236
Q ss_pred CeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEE
Q 039428 208 NGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETA 287 (335)
Q Consensus 208 ~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~ 287 (335)
++|+.+++|+||++... -|+++|+... ..+.+....+-.-....++..|++|+||++.. +++..++...+ +.
T Consensus 546 ~~i~~d~~g~lWigT~~--Gl~~~d~~~~--~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~--~Gl~~~~~~~~-~~- 617 (795)
T 4a2l_A 546 NCIYEASNGIIWVGTRE--GFYCFNEKDK--QIKRYNTTNGLPNNVVYGILEDSFGRLWLSTN--RGISCFNPETE-KF- 617 (795)
T ss_dssp EEEEECTTSCEEEEESS--CEEEEETTTT--EEEEECGGGTCSCSCEEEEEECTTSCEEEEET--TEEEEEETTTT-EE-
T ss_pred EEEEECCCCCEEEEeCC--CceeECCCCC--cEEEeCCCCCCchhheEEEEECCCCCEEEEcC--CceEEEcCCCC-cE-
Confidence 78999999999998764 5999999876 55555432111112245688899999999986 66777775443 11
Q ss_pred EEeeeec-CCCCCc-ceEEEEe-CCeEEEEeccCC
Q 039428 288 SVVAKFN-GPTHRV-ATAATVK-DGRVYLSHLLGL 319 (335)
Q Consensus 288 ~~~~~~~-~p~~~~-Pt~va~~-~g~lyV~~~~~~ 319 (335)
+...... .+...+ ..++..+ +|+||+....|.
T Consensus 618 ~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~Gl 652 (795)
T 4a2l_A 618 RNFTESDGLQSNQFNTASYCRTSVGQMYFGGINGI 652 (795)
T ss_dssp EEECGGGTCSCSCEEEEEEEECTTSCEEEEETTEE
T ss_pred EEcCCcCCCccccCccCceeECCCCeEEEecCCce
Confidence 1111111 121111 1244444 899999665443
No 130
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.08 E-value=1.1e-07 Score=86.41 Aligned_cols=195 Identities=12% Similarity=0.046 Sum_probs=133.1
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
....++|+|+++.++++..++.|..++...++. .. .+.... .....++++| +++++++.. .. +.
T Consensus 124 ~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~----~~---~~~~~~---~~v~~~~~sp-dg~~lasg~-~d----g~ 187 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK----EY---SLDTRG---KFILSIAYSP-DGKYLASGA-ID----GI 187 (321)
T ss_dssp CCCCEEECTTSSEEEEECTTSEEEEEETTTCSE----EE---EEECSS---SCEEEEEECT-TSSEEEEEE-TT----SC
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce----eE---EecCCC---ceEEEEEECC-CCCEEEEEc-CC----Ce
Confidence 456799999999888888889999999654441 11 111221 2467899998 565555422 11 35
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC-cEEEEecCCccccccccccccccC
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG-QLLSIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~~~~~~~~~~~~p~ 208 (335)
|..||.++++....... . ....+.++++|+|+++++.+..+.|..+|... +....+.. ......
T Consensus 188 i~iwd~~~~~~~~~~~~--h---~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~----------h~~~v~ 252 (321)
T 3ow8_A 188 INIFDIATGKLLHTLEG--H---AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG----------HASWVL 252 (321)
T ss_dssp EEEEETTTTEEEEEECC--C---SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC----------CSSCEE
T ss_pred EEEEECCCCcEEEEEcc--c---CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC----------CCCceE
Confidence 99999999877643321 1 34567899999999999888899999999764 33332211 112367
Q ss_pred eEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEc
Q 039428 209 GIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVES 280 (335)
Q Consensus 209 Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~ 280 (335)
.++++|+|..+++-..++.|..+|+..++ ....+. + . -....++++.++|..+++....+.+++.+.
T Consensus 253 ~~~~sp~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~--~-h-~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 253 NVAFCPDDTHFVSSSSDKSVKVWDVGTRT-CVHTFF--D-H-QDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEEC--C-C-SSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCE-EEEEEc--C-C-CCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 89999999777777788999999998763 344443 2 1 133678999999987777554466777653
No 131
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.08 E-value=3.9e-08 Score=88.63 Aligned_cols=175 Identities=12% Similarity=0.064 Sum_probs=118.0
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceE
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSAL 130 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v 130 (335)
...++.+++|++|+.+ .++.|+.+|+. ++. ... . ..+. .....+.+|+ +++||+++ + .|
T Consensus 139 ~~~~~~~~~g~l~vgt-~~~~l~~~d~~-g~~----~~~--~-~~~~---~~~~~~~~d~-~g~l~v~t----~----~l 197 (330)
T 3hxj_A 139 YATPIVSEDGTIYVGS-NDNYLYAINPD-GTE----KWR--F-KTND---AITSAASIGK-DGTIYFGS----D----KV 197 (330)
T ss_dssp CSCCEECTTSCEEEEC-TTSEEEEECTT-SCE----EEE--E-ECSS---CCCSCCEECT-TCCEEEES----S----SE
T ss_pred eeeeEEcCCCEEEEEc-CCCEEEEECCC-CCE----eEE--E-ecCC---CceeeeEEcC-CCEEEEEe----C----EE
Confidence 4567888888866544 56899999864 541 111 1 1111 2456778885 89999953 1 39
Q ss_pred EEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCeE
Q 039428 131 AAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGI 210 (335)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gi 210 (335)
+++| .+++..+..... ......+++|++|++|++.. .+.|++++++|+....+... ...+..+
T Consensus 198 ~~~d-~~g~~~~~~~~~-----~~~~~~~~~~~~g~l~v~t~-~~gl~~~~~~g~~~~~~~~~----------~~~~~~~ 260 (330)
T 3hxj_A 198 YAIN-PDGTEKWNFYAG-----YWTVTRPAISEDGTIYVTSL-DGHLYAINPDGTEKWRFKTG----------KRIESSP 260 (330)
T ss_dssp EEEC-TTSCEEEEECCS-----SCCCSCCEECTTSCEEEEET-TTEEEEECTTSCEEEEEECS----------SCCCSCC
T ss_pred EEEC-CCCcEEEEEccC-----CcceeceEECCCCeEEEEcC-CCeEEEECCCCCEeEEeeCC----------CCccccc
Confidence 9999 556555444331 34577899999999999854 57899999988766532211 1124567
Q ss_pred EEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEec
Q 039428 211 VYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGN 270 (335)
Q Consensus 211 a~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~ 270 (335)
+++++|+||++.. ++.|+++|.++. ....+...+ .....+..|.+|+||++..
T Consensus 261 ~~~~~g~l~v~t~-~ggl~~~d~~g~--~~~~~~~~~----~~~~~~~~d~~g~l~~gt~ 313 (330)
T 3hxj_A 261 VIGNTDTIYFGSY-DGHLYAINPDGT--EKWNFETGS----WIIATPVIDENGTIYFGTR 313 (330)
T ss_dssp EECTTSCEEEECT-TCEEEEECTTSC--EEEEEECSS----CCCSCCEECTTCCEEEECT
T ss_pred eEcCCCeEEEecC-CCCEEEECCCCc--EEEEEEcCC----ccccceEEcCCCEEEEEcC
Confidence 8888899999864 567999998554 445555433 2356788899999999966
No 132
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.08 E-value=5e-07 Score=81.86 Aligned_cols=218 Identities=12% Similarity=0.082 Sum_probs=139.4
Q ss_pred eeEEEcCCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEE
Q 039428 40 HVYQYHSPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAF 119 (335)
Q Consensus 40 ~~~~~~~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~ 119 (335)
..+.+.+......+++|+++|+.++++..++.|..||..+++. +. .+.... .....+++++ +++.+++.
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~----~~---~~~~h~---~~v~~~~~~~-~~~~l~s~ 92 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGER----LG---TLDGHT---GTIWSIDVDC-FTKYCVTG 92 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCE----EE---EECCCS---SCEEEEEECT-TSSEEEEE
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchh----hh---hhhhcC---CcEEEEEEcC-CCCEEEEE
Confidence 4455666555678999999999888888889999999654541 11 222111 3567899997 55554432
Q ss_pred ecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCC-----CeEEEEccCCcE----EEEe
Q 039428 120 TDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVS-----SKIWKVGVEGQL----LSII 190 (335)
Q Consensus 120 ~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~-----~~I~~~d~~g~~----~~~~ 190 (335)
... +.|..||.++++....... ......++++++|+.+++.... +.|..++..... ....
T Consensus 93 ~~d-----g~i~iwd~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~ 161 (369)
T 3zwl_B 93 SAD-----YSIKLWDVSNGQCVATWKS------PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKV 161 (369)
T ss_dssp ETT-----TEEEEEETTTCCEEEEEEC------SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEE
T ss_pred eCC-----CeEEEEECCCCcEEEEeec------CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccc
Confidence 221 3699999998877644432 3456789999999877776665 888888865221 1100
Q ss_pred cCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEec
Q 039428 191 RSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGN 270 (335)
Q Consensus 191 ~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~ 270 (335)
.......-...........++++|++..+++-..++.|..+|+.........+.... .....+++.+++.++++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~ 237 (369)
T 3zwl_B 162 SEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHE----KSISDMQFSPDLTYFITSS 237 (369)
T ss_dssp CSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCS----SCEEEEEECTTSSEEEEEE
T ss_pred ccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCC----CceeEEEECCCCCEEEEec
Confidence 000000000001112578899999996666666789999999987321444444222 2367899999998777755
Q ss_pred CCCeEEEEEcCCC
Q 039428 271 PYPSARLVESSDG 283 (335)
Q Consensus 271 ~~~~~~v~~~~~~ 283 (335)
..+.+++.+...+
T Consensus 238 ~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 238 RDTNSFLVDVSTL 250 (369)
T ss_dssp TTSEEEEEETTTC
T ss_pred CCceEEEEECCCC
Confidence 4577888887654
No 133
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.07 E-value=3.6e-08 Score=94.48 Aligned_cols=255 Identities=13% Similarity=0.113 Sum_probs=138.9
Q ss_pred cceeeeEEcCCCC-EEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcC--------CCCcceEEEeCC---CCeEE
Q 039428 49 FLCETAKWDDVGR-RFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVV--------GNATMGIAVDRP---RNRLL 116 (335)
Q Consensus 49 ~~pegia~d~~g~-~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~--------~~~p~Gi~~d~~---~g~l~ 116 (335)
..|.++++.|+|. ++|++...++|++++. ++.. ..+ ++...+... ...+.||+++|+ ++.||
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~-~g~~----~~~-~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lY 87 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTP-EGEI----FKE-PYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLY 87 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECT-TSCB----CSS-CSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeC-CCCe----eee-eecCCcceeccCccccCCCcceeeEeCCCCcCCCEEE
Confidence 4799999999996 4555556799999974 4431 000 111111110 135789999974 58999
Q ss_pred EEEecCCC-------CccceEEEEECCCC----------eEEEEeecCCCccCCCCCCceeECCCCcEEEEeC-------
Q 039428 117 VAFTDVLG-------NKYSALAAYDLSTW----------KRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDV------- 172 (335)
Q Consensus 117 v~~~D~~~-------~~~~~v~~~d~~~~----------~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~------- 172 (335)
|+.+.... ...++|.+|..+.+ ++++... .. ...+....|+++|||+|||+-.
T Consensus 88 v~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~--~~-~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~ 164 (463)
T 2wg3_C 88 VSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVA--EL-HRKHLGGQLLFGPDGFLYIILGDGMITLD 164 (463)
T ss_dssp EEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEE--ES-SSSSCEEEEEECTTSCEEEEECCTTCCHH
T ss_pred EEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcC--CC-CCcccCCcEeECCCCcEEEEeCCCCCCCC
Confidence 97542211 01146888876421 2333222 11 1245667899999999999832
Q ss_pred ----------CCCeEEEEccCCcE-----EEEecCCcccc----cc-ccccccccCeEEEccC-----C--eEEEEEC-C
Q 039428 173 ----------VSSKIWKVGVEGQL-----LSIIRSPLFTA----KE-WYKNVFGLNGIVYHPD-----G--FLIVIHM-C 224 (335)
Q Consensus 173 ----------~~~~I~~~d~~g~~-----~~~~~~~~~~~----~~-~~~~~~~p~Gia~~~d-----g--~Lyvad~-~ 224 (335)
..+.|+|++++|+. ..--+++.... ++ ....+.+|.|++|+|+ | ++|.+|. +
T Consensus 165 ~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G 244 (463)
T 2wg3_C 165 DMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNG 244 (463)
T ss_dssp HHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC--
T ss_pred ccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCC
Confidence 24789999999841 00001111000 11 2335568999999997 5 6787885 2
Q ss_pred ----CCEEEEEeCCCCce---eEEEEeccCCcCCCCCCeEEEcC-------CCcEEEEecCCCeEEEEEcCCC---cEEE
Q 039428 225 ----SGNLFKIDIRKEEE---EVKLIELRGGSSLSLGDGLALLS-------PTKLVVAGNPYPSARLVESSDG---WETA 287 (335)
Q Consensus 225 ----~~~v~~~d~~~~~~---~~~~~~~~g~~~~~~pdGia~d~-------~g~l~va~~~~~~~~v~~~~~~---~~~~ 287 (335)
..+|.++...+.-+ .+..+.... -..|.|+++-. .|.+++++.. +.++.+....+ |...
T Consensus 245 ~~~~~~ei~~i~~G~~yG~~~P~~~~~~~~---g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~~~~~~~~~ 320 (463)
T 2wg3_C 245 KNRSSARILQIIKGKDYESEPSLLEFKPFS---NGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSPVTKQWQEK 320 (463)
T ss_dssp ----CEEEEEEC----CCSCCCCEECCC-------CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC-----CCEEE
T ss_pred CCCCCCeEeeeccCCCCCCCCCeEEeeCCC---CccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCCCCceeeEE
Confidence 23455553322100 111121100 02477888853 2568888774 55666655433 3322
Q ss_pred EEe-eee---cCCCCCcceEEEEe-CCeEEEEec
Q 039428 288 SVV-AKF---NGPTHRVATAATVK-DGRVYLSHL 316 (335)
Q Consensus 288 ~~~-~~~---~~p~~~~Pt~va~~-~g~lyV~~~ 316 (335)
.+. +.. ..+....|.+++++ +|.|||++.
T Consensus 321 ~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 321 PLCLGTSGSCRGYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp EECEEETTSSCSCCCSEEEEEEECTTCCEEEEEE
T ss_pred EeecCCcccccccccCcceEEEECCCCCEEEEec
Confidence 221 111 01223457888886 899999765
No 134
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.07 E-value=4e-08 Score=90.98 Aligned_cols=204 Identities=9% Similarity=0.065 Sum_probs=130.4
Q ss_pred ceeeeEEcCCCCEEEEE--ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 50 LCETAKWDDVGRRFLVS--FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~--~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
+...++|+|+|+++++. ..++.|..||..+++. +. .+... .....++++| +|.++++..+
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~----~~---~~~~~----~~V~~v~fsp-dg~~l~s~s~------ 196 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE----KF---EIETR----GEVKDLHFST-DGKVVAYITG------ 196 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE----EE---EEECS----SCCCEEEECT-TSSEEEEECS------
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE----EE---EeCCC----CceEEEEEcc-CCceEEeccc------
Confidence 45689999999987665 4578999999754441 11 22221 2467999998 6766665333
Q ss_pred ceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCC----eEEEEccCCcEEEEecCCcccccccccc
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSS----KIWKVGVEGQLLSIIRSPLFTAKEWYKN 203 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~----~I~~~d~~g~~~~~~~~~~~~~~~~~~~ 203 (335)
..+.+++..+++......... . ....+.+++.|+|+.+++-+..+ .++.++.............+.. .
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~--~-~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~ 268 (365)
T 4h5i_A 197 SSLEVISTVTGSCIARKTDFD--K-NWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN-----R 268 (365)
T ss_dssp SCEEEEETTTCCEEEEECCCC--T-TEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES-----S
T ss_pred eeEEEEEeccCcceeeeecCC--C-CCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC-----C
Confidence 247888887776543222211 1 23457799999998776644332 5666665433222110001110 1
Q ss_pred ccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 204 VFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 204 ~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
....+.++++|||.++++-+.++.|..+|....+ .+..+. .+ + -.....+++.|+|+++++....+.++|.+.+.+
T Consensus 269 ~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~-~~~~~~-~g-H-~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 269 FKGITSMDVDMKGELAVLASNDNSIALVKLKDLS-MSKIFK-QA-H-SFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp CSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE-EEEEET-TS-S-SSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc-EEEEec-Cc-c-cCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 2236789999999888887788999999998873 333332 22 2 233689999999998888766688999987654
No 135
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.06 E-value=2e-07 Score=90.56 Aligned_cols=222 Identities=13% Similarity=0.144 Sum_probs=145.0
Q ss_pred CcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 48 SFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
.....+++++|+|+.+++...++.|..++. +++ .+. .+.... ....++++++ +++.+++..+.
T Consensus 344 ~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~----~~~---~~~~~~---~~v~~~~~s~-dg~~l~~~~~d----- 406 (577)
T 2ymu_A 344 SSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQ----LLQ---TLTGHS---SSVRGVAFSP-DGQTIASASDD----- 406 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEET-TCC----EEE---EEECCS---SCEEEEEECT-TSSCEEEEETT-----
T ss_pred CCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCC----EEE---EecCCC---CCeEEEEECC-CCCEEEEEeCC-----
Confidence 334578999999998887788899999984 454 122 222221 2567899997 55554432221
Q ss_pred ceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCcccccccccccccc
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGL 207 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p 207 (335)
..|..||..+. ....... . ......+++.|+++.+++.+..+.|..++.+++....+.. .....
T Consensus 407 ~~v~~~~~~~~-~~~~~~~--~---~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~----------~~~~v 470 (577)
T 2ymu_A 407 KTVKLWNRNGQ-LLQTLTG--H---SSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTG----------HSSSV 470 (577)
T ss_dssp SEEEEECTTCC-EEEEEEC--C---SSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEEC----------CSSCE
T ss_pred CEEEEEeCCCC-EEEEecC--C---CCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcC----------CCCCE
Confidence 35889996544 3322211 1 2345689999999988888888999999998876654321 11236
Q ss_pred CeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEE
Q 039428 208 NGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETA 287 (335)
Q Consensus 208 ~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~ 287 (335)
..++++|||.++++-..++.|..++.++. ..+.+.... .....+++.++|+++++....+.+++.+.. +
T Consensus 471 ~~~~~spd~~~las~~~d~~i~iw~~~~~--~~~~~~~h~----~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~---- 539 (577)
T 2ymu_A 471 RGVAFSPDGQTIASASDDKTVKLWNRNGQ--LLQTLTGHS----SSVRGVAFSPDGQTIASASDDKTVKLWNRN-G---- 539 (577)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEETTSC--EEEEEECCS----SCEEEEEECTTSSCEEEEETTSEEEEECTT-S----
T ss_pred EEEEEcCCCCEEEEEeCCCEEEEEcCCCC--EEEEEeCCC----CCEEEEEEcCCCCEEEEEECcCEEEEEeCC-C----
Confidence 78999999987777778899999997765 555554322 236789999999877765544678887753 3
Q ss_pred EEeeeecCCCCCcceEEEEe-CCeEEEE
Q 039428 288 SVVAKFNGPTHRVATAATVK-DGRVYLS 314 (335)
Q Consensus 288 ~~~~~~~~p~~~~Pt~va~~-~g~lyV~ 314 (335)
+....+.+.. ...+++++. +|+..++
T Consensus 540 ~~~~~~~~h~-~~v~~~~fs~dg~~l~s 566 (577)
T 2ymu_A 540 QLLQTLTGHS-SSVWGVAFSPDGQTIAS 566 (577)
T ss_dssp CEEEEEECCS-SCEEEEEECTTSSCEEE
T ss_pred CEEEEEcCCC-CCEEEEEEcCCCCEEEE
Confidence 2233333221 224678885 6665554
No 136
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.06 E-value=9.7e-08 Score=97.47 Aligned_cols=236 Identities=12% Similarity=0.066 Sum_probs=142.9
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecC-----CcCCCCcceEEEeCCCCe-EEEEEecCCC
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKED-----DVVGNATMGIAVDRPRNR-LLVAFTDVLG 124 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~-----~~~~~~p~Gi~~d~~~g~-l~v~~~D~~~ 124 (335)
..+++.|++|++|+.+ ..+.|.++++.++. +.. +...+ .+..+....|..|+ +|+ ||+++.+
T Consensus 359 V~~i~~d~~g~lWiGt-~~~Gl~~~~~~~~~-----~~~--~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~--- 426 (795)
T 4a2l_A 359 VSCIVEDKDKNLWIGT-NDGGLNLYNPITQR-----FTS--YTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHA--- 426 (795)
T ss_dssp EEEEEECTTSCEEEEE-SSSCEEEECTTTCC-----EEE--ECCC------CCSCSCEEEEEEET-TTTEEEEEETT---
T ss_pred eEEEEECCCCCEEEEE-CCCCeEEEcCCCCc-----EEE--EecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCc---
Confidence 4578889999887655 45679999854343 221 21111 12234567899995 788 9996422
Q ss_pred CccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccc
Q 039428 125 NKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNV 204 (335)
Q Consensus 125 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~ 204 (335)
..|.++|+++++....... .+.........+..|++|++|++.. +.|++++++++....+... ..+. ....
T Consensus 427 ---~Gl~~~d~~~~~~~~~~~~-~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~--~~~~-~~~~ 497 (795)
T 4a2l_A 427 ---GGLSILHRNSGQVENFNQR-NSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSFTTIEKE--KDGT-PVVS 497 (795)
T ss_dssp ---TEEEEEETTTCCEEEECTT-TSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEEEECCBC--TTCC-BCCC
T ss_pred ---CceeEEeCCCCcEEEeecC-CCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeEEEcccc--cccc-ccCC
Confidence 3599999998876532211 1111134567889999999999865 5699999986554432211 0000 0001
Q ss_pred cccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEec---cCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcC
Q 039428 205 FGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIEL---RGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESS 281 (335)
Q Consensus 205 ~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~---~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~ 281 (335)
.....|+.+++|+||++.. +-|++++.++. .. .+.. ...........+..|++|++|++.. +++..++..
T Consensus 498 ~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~--~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~--~Gl~~~d~~ 570 (795)
T 4a2l_A 498 KQITTLFRDSHKRLWIGGE--EGLSVFKQEGL--DI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR--EGFYCFNEK 570 (795)
T ss_dssp CCEEEEEECTTCCEEEEES--SCEEEEEEETT--EE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES--SCEEEEETT
T ss_pred ceEEEEEECCCCCEEEEeC--CceEEEeCCCC--eE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC--CCceeECCC
Confidence 2367889999999999987 45999998876 33 3321 0001012356788899999999976 457777654
Q ss_pred CCcEEEEEeeeec-CCCCCcceEEEEe-CCeEEEEecc
Q 039428 282 DGWETASVVAKFN-GPTHRVATAATVK-DGRVYLSHLL 317 (335)
Q Consensus 282 ~~~~~~~~~~~~~-~p~~~~Pt~va~~-~g~lyV~~~~ 317 (335)
.+ +. +...... .| .....++..+ +|+||++...
T Consensus 571 ~~-~~-~~~~~~~gl~-~~~i~~i~~d~~g~lWi~t~~ 605 (795)
T 4a2l_A 571 DK-QI-KRYNTTNGLP-NNVVYGILEDSFGRLWLSTNR 605 (795)
T ss_dssp TT-EE-EEECGGGTCS-CSCEEEEEECTTSCEEEEETT
T ss_pred CC-cE-EEeCCCCCCc-hhheEEEEECCCCCEEEEcCC
Confidence 43 11 1111111 12 2223456666 7999997643
No 137
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.06 E-value=2.5e-08 Score=101.69 Aligned_cols=236 Identities=11% Similarity=0.062 Sum_probs=141.1
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceE
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSAL 130 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v 130 (335)
..+++.|++|++|+.+ ..+.|+++++.++. ... +........+....|..|+ +|+||+.+.+ ..|
T Consensus 365 v~~i~~d~~g~lWigt-~~~Gl~~~~~~~~~-----~~~--~~~~~~~~~~~v~~i~~d~-~g~lWigt~~------~Gl 429 (781)
T 3v9f_A 365 VSSVCDDGQGKLWIGT-DGGGINVFENGKRV-----AIY--NKENRELLSNSVLCSLKDS-EGNLWFGTYL------GNI 429 (781)
T ss_dssp EEEEEECTTSCEEEEE-BSSCEEEEETTEEE-----EEC--C-----CCCSBEEEEEECT-TSCEEEEETT------EEE
T ss_pred eEEEEEcCCCCEEEEe-CCCcEEEEECCCCe-----EEE--ccCCCCCCCcceEEEEECC-CCCEEEEecc------CCE
Confidence 4678889999887665 45679999853222 111 1111122224567888885 8999996421 359
Q ss_pred EEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCeE
Q 039428 131 AAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGI 210 (335)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gi 210 (335)
.++|+++++..... .. .........+..|++|++|++.. +.|+++++++.....+.... .. .........|
T Consensus 430 ~~~~~~~~~~~~~~-~~--~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~-~~---~~~~~~i~~i 500 (781)
T 3v9f_A 430 SYYNTRLKKFQIIE-LE--KNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKKVIHHYDTS-NS---QLLENFVRSI 500 (781)
T ss_dssp EEECSSSCEEEECC-ST--TTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSSCCEEECTT-TS---SCSCSCEEEE
T ss_pred EEEcCCCCcEEEec-cC--CCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCeEEecccCc-cc---ccccceeEEE
Confidence 99999888665321 10 11134567889999999999865 67999998754322111100 00 0011346789
Q ss_pred EEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeE-EEEEcCCCcEEEEE
Q 039428 211 VYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSA-RLVESSDGWETASV 289 (335)
Q Consensus 211 a~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~-~v~~~~~~~~~~~~ 289 (335)
+.+++|+||++....+ |++++++.+ ..+.+.....-.......+..|++|++|++.. +++ ..++...+ +. +.
T Consensus 501 ~~d~~g~lWigt~~~G-l~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~--~Glv~~~d~~~~-~~-~~ 573 (781)
T 3v9f_A 501 AQDSEGRFWIGTFGGG-VGIYTPDMQ--LVRKFNQYEGFCSNTINQIYRSSKGQMWLATG--EGLVCFPSARNF-DY-QV 573 (781)
T ss_dssp EECTTCCEEEEESSSC-EEEECTTCC--EEEEECTTTTCSCSCEEEEEECTTSCEEEEET--TEEEEESCTTTC-CC-EE
T ss_pred EEcCCCCEEEEEcCCC-EEEEeCCCC--eEEEccCCCCCCCCeeEEEEECCCCCEEEEEC--CCceEEECCCCC-cE-EE
Confidence 9999999999987555 999999876 55555432111112345788899999999976 555 54443332 11 11
Q ss_pred eeeec-CCCCCcceEEEEe-CCeEEEEeccC
Q 039428 290 VAKFN-GPTHRVATAATVK-DGRVYLSHLLG 318 (335)
Q Consensus 290 ~~~~~-~p~~~~Pt~va~~-~g~lyV~~~~~ 318 (335)
...-. .|. ....+++.+ +|+||++...|
T Consensus 574 ~~~~~gl~~-~~i~~i~~d~~g~lW~~t~~G 603 (781)
T 3v9f_A 574 FQRKEGLPN-THIRAISEDKNGNIWASTNTG 603 (781)
T ss_dssp ECGGGTCSC-CCCCEEEECSSSCEEEECSSC
T ss_pred ccccCCCCC-ceEEEEEECCCCCEEEEcCCc
Confidence 11111 121 223467666 89999976433
No 138
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.03 E-value=5.1e-07 Score=80.83 Aligned_cols=208 Identities=15% Similarity=0.086 Sum_probs=139.2
Q ss_pred eEEEcCCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEe
Q 039428 41 VYQYHSPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFT 120 (335)
Q Consensus 41 ~~~~~~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~ 120 (335)
...+.+......+++|+++|+.++++..++.|..|+..+++. .. .+.... .....+++++ +++++++..
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~----~~---~~~~h~---~~v~~~~~~~-~~~~l~s~~ 84 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF----EK---TISGHK---LGISDVAWSS-DSNLLVSAS 84 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE----EE---EECCCS---SCEEEEEECT-TSSEEEEEE
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCccc----ch---hhccCC---CceEEEEEcC-CCCEEEEEC
Confidence 344444444568999999999888878899999998655541 11 222111 2467899998 555555422
Q ss_pred cCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC-cEEEEecCCcccccc
Q 039428 121 DVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG-QLLSIIRSPLFTAKE 199 (335)
Q Consensus 121 D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~~~~~ 199 (335)
.. ..|..||.++++....... . ......+++.++++.+++.+..+.|..+|... +....+..
T Consensus 85 ~d-----~~i~vwd~~~~~~~~~~~~----~-~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~------- 147 (312)
T 4ery_A 85 DD-----KTLKIWDVSSGKCLKTLKG----H-SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA------- 147 (312)
T ss_dssp TT-----SEEEEEETTTCCEEEEEEC----C-SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC-------
T ss_pred CC-----CEEEEEECCCCcEEEEEcC----C-CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC-------
Confidence 21 3599999998876543322 1 24556789999999888888889999999864 44332211
Q ss_pred ccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEE
Q 039428 200 WYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVE 279 (335)
Q Consensus 200 ~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~ 279 (335)
.......+++++++.++++-..++.|..+|....+ ....+.... ......++++++++++++....+.+++.+
T Consensus 148 ---~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~iwd 220 (312)
T 4ery_A 148 ---HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ-CLKTLIDDD---NPPVSFVKFSPNGKYILAATLDNTLKLWD 220 (312)
T ss_dssp ---CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-EEEEECCSS---CCCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred ---CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc-eeeEEeccC---CCceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 11236789999999777777788899999998764 333332211 12245688999998777755457788888
Q ss_pred cCCC
Q 039428 280 SSDG 283 (335)
Q Consensus 280 ~~~~ 283 (335)
...+
T Consensus 221 ~~~~ 224 (312)
T 4ery_A 221 YSKG 224 (312)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 7654
No 139
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.02 E-value=3.3e-07 Score=83.54 Aligned_cols=202 Identities=11% Similarity=0.028 Sum_probs=129.0
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceE
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSAL 130 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v 130 (335)
..+++|++++++++++..++.|..||..+++ .+....+.... .....+++++ +++++++.. .. ..|
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~-----~~~~~~~~~h~---~~v~~~~~~~-~~~~l~~~~-~d----g~i 76 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNK-----WVQVHELKEHN---GQVTGVDWAP-DSNRIVTCG-TD----RNA 76 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTE-----EEEEEEEECCS---SCEEEEEEET-TTTEEEEEE-TT----SCE
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCc-----EEeeeeecCCC---CcccEEEEeC-CCCEEEEEc-CC----CeE
Confidence 4689999999988888778999999864332 11111222111 3568999998 555544322 11 359
Q ss_pred EEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcE----EEEecCCccccccccccccc
Q 039428 131 AAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQL----LSIIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~----~~~~~~~~~~~~~~~~~~~~ 206 (335)
..||.++++.......... ......++++++|+.+++....+.|..++.+... ...+.. +....
T Consensus 77 ~vwd~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~---------~~~~~ 144 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVILRI---NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK---------PIRST 144 (372)
T ss_dssp EEEEEETTEEEEEEECCCC---SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECT---------TCCSC
T ss_pred EEEECCCCeeeeeEEeecC---CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeec---------ccCCC
Confidence 9999988875533332211 3457789999999877777777888887765322 111110 01234
Q ss_pred cCeEEEccCCeEEEEECCCCEEEEEeCC------------------CCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEE
Q 039428 207 LNGIVYHPDGFLIVIHMCSGNLFKIDIR------------------KEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVA 268 (335)
Q Consensus 207 p~Gia~~~dg~Lyvad~~~~~v~~~d~~------------------~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va 268 (335)
...++++|++.++++-..++.|..+|.. ..+ ....+. + . ......+++.+++.++++
T Consensus 145 i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~-~-~~~v~~~~~~~~~~~l~~ 219 (372)
T 1k8k_C 145 VLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGE-LMFESS--S-S-CGWVHGVCFSANGSRVAW 219 (372)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTC-EEEECC--C-C-SSCEEEEEECSSSSEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhh-heEecC--C-C-CCeEEEEEECCCCCEEEE
Confidence 7899999999777777778889999964 221 333332 2 1 133678999999977666
Q ss_pred ecCCCeEEEEEcCCC
Q 039428 269 GNPYPSARLVESSDG 283 (335)
Q Consensus 269 ~~~~~~~~v~~~~~~ 283 (335)
....+.+++.+...+
T Consensus 220 ~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 220 VSHDSTVCLADADKK 234 (372)
T ss_dssp EETTTEEEEEEGGGT
T ss_pred EeCCCEEEEEECCCC
Confidence 554577888887654
No 140
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.01 E-value=1.3e-06 Score=79.58 Aligned_cols=203 Identities=10% Similarity=0.081 Sum_probs=135.5
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
....++|+|+|+.+++...++.|..|+....... ......+ .+.. .....+.+.+ ++.++.+..| ..
T Consensus 99 ~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~---~~~~~~~--~~h~-~~v~~~~~~~-~~~l~s~s~d------~~ 165 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN---VRVSREL--AGHT-GYLSCCRFLD-DNQIVTSSGD------TT 165 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS---CEEEEEE--ECCS-SCEEEEEEEE-TTEEEEEETT------SC
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc---ceeEEEe--cCCC-ccEEEEEECC-CCcEEEEECC------Cc
Confidence 3568899999998888888999999985433210 0100011 1111 2456777775 6776664333 35
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC-cEEEEecCCccccccccccccccC
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG-QLLSIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~~~~~~~~~~~~p~ 208 (335)
|..||.++++....... . ....+.+++.|+|+++++.+..+.|..+|... +....+.. .....+
T Consensus 166 i~~wd~~~~~~~~~~~~--h---~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~----------h~~~v~ 230 (340)
T 1got_B 166 CALWDIETGQQTTTFTG--H---TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG----------HESDIN 230 (340)
T ss_dssp EEEEETTTTEEEEEECC--C---SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC----------CSSCEE
T ss_pred EEEEECCCCcEEEEEcC--C---CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcC----------CcCCEE
Confidence 99999998876643321 1 34567899999999999988899999999764 33332211 112378
Q ss_pred eEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 209 GIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 209 Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
.++++|++.++++-..++.|..+|+...+ ....+.... . ......+++.++|.++++....+.+++.+...+
T Consensus 231 ~v~~~p~~~~l~s~s~d~~v~iwd~~~~~-~~~~~~~~~-~-~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 231 AICFFPNGNAFATGSDDATCRLFDLRADQ-ELMTYSHDN-I-ICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCTT-C-CSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEECCCCc-EEEEEccCC-c-ccceEEEEECCCCCEEEEECCCCeEEEEEcccC
Confidence 99999999888888889999999998763 333343221 1 123567899999998888665577888886544
No 141
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.00 E-value=1.1e-07 Score=92.49 Aligned_cols=190 Identities=13% Similarity=0.131 Sum_probs=128.5
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
....+++++++|+.+++...++.|..||. +++. +. .+.... ....+++++| +++++++..+. .
T Consensus 386 ~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~----~~---~~~~~~---~~v~~~~~s~-d~~~l~~~~~d-----~ 448 (577)
T 2ymu_A 386 SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQL----LQ---TLTGHS---SSVWGVAFSP-DDQTIASASDD-----K 448 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECT-TCCE----EE---EEECCS---SCEEEEEECT-TSSEEEEEETT-----S
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCE----EE---EecCCC---CCeEEEEECC-CCCEEEEEcCC-----C
Confidence 34678999999998877788899999984 4541 22 222221 2567899998 45554432221 3
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccC
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~ 208 (335)
.|..||..+..+... .. . ....+.++++|+|++.++....+.|..++.+++....+.. .....+
T Consensus 449 ~v~~w~~~~~~~~~~-~~----~-~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~----------h~~~v~ 512 (577)
T 2ymu_A 449 TVKLWNRNGQLLQTL-TG----H-SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG----------HSSSVR 512 (577)
T ss_dssp EEEEEETTSCEEEEE-EC----C-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEEC----------CSSCEE
T ss_pred EEEEEECCCCEEEEE-cC----C-CCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeC----------CCCCEE
Confidence 588999765433322 11 1 3456789999999988888888999999998887664321 112378
Q ss_pred eEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEE
Q 039428 209 GIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARL 277 (335)
Q Consensus 209 Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v 277 (335)
.++++|||.++++-..++.|..+|..+. ....+.... ....++++.++|+++++....+.+++
T Consensus 513 ~l~~s~dg~~l~s~~~dg~v~lwd~~~~--~~~~~~~h~----~~v~~~~fs~dg~~l~s~~~D~~i~~ 575 (577)
T 2ymu_A 513 GVAFSPDGQTIASASDDKTVKLWNRNGQ--LLQTLTGHS----SSVWGVAFSPDGQTIASASSDKTVKL 575 (577)
T ss_dssp EEEECTTSSCEEEEETTSEEEEECTTSC--EEEEEECCS----SCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred EEEEcCCCCEEEEEECcCEEEEEeCCCC--EEEEEcCCC----CCEEEEEEcCCCCEEEEEeCCCEEEE
Confidence 9999999976666667889999997665 555554222 23678999999987777443345554
No 142
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.98 E-value=5e-06 Score=74.24 Aligned_cols=230 Identities=14% Similarity=0.104 Sum_probs=140.4
Q ss_pred CcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 48 SFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
......++|+++++.++++..++.|..||..+++ .+. .+.... .....+.+++ ++.++++.. ..
T Consensus 65 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~----~~~---~~~~~~---~~v~~~~~~~-~~~~l~s~~-~d---- 128 (312)
T 4ery_A 65 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK----CLK---TLKGHS---NYVFCCNFNP-QSNLIVSGS-FD---- 128 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC----EEE---EEECCS---SCEEEEEECS-SSSEEEEEE-TT----
T ss_pred CCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc----EEE---EEcCCC---CCEEEEEEcC-CCCEEEEEe-CC----
Confidence 3345789999999988888889999999965444 122 222221 2457888997 555555322 11
Q ss_pred ceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC-cEEEEecCCccccccccccccc
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG-QLLSIIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~~~~~~~~~~~~ 206 (335)
..|..||.++++....... . ......++++++|+++++.+..+.|..+|... +....+... ....
T Consensus 129 ~~i~iwd~~~~~~~~~~~~--~---~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---------~~~~ 194 (312)
T 4ery_A 129 ESVRIWDVKTGKCLKTLPA--H---SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD---------DNPP 194 (312)
T ss_dssp SCEEEEETTTCCEEEEECC--C---SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCS---------SCCC
T ss_pred CcEEEEECCCCEEEEEecC--C---CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEecc---------CCCc
Confidence 3599999998876533321 1 23456799999999888888889999999864 333322110 1122
Q ss_pred cCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEE
Q 039428 207 LNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWET 286 (335)
Q Consensus 207 p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~ 286 (335)
...++++|++..+++-..++.|..+|....+ ....+...... .....-....+++.++++....+.+++.+...+
T Consensus 195 ~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~--- 269 (312)
T 4ery_A 195 VSFVKFSPNGKYILAATLDNTLKLWDYSKGK-CLKTYTGHKNE-KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK--- 269 (312)
T ss_dssp EEEEEECTTSSEEEEEETTTEEEEEETTTTE-EEEEECSSCCS-SSCCCEEEECSSSCEEEECCTTSCEEEEETTTC---
T ss_pred eEEEEECCCCCEEEEEcCCCeEEEEECCCCc-EEEEEEecCCc-eEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc---
Confidence 5679999999766677788999999998873 34444321111 111112222345677777655577888887654
Q ss_pred EEEeeeecCCCCCcceEEEEe-CCeEEEE
Q 039428 287 ASVVAKFNGPTHRVATAATVK-DGRVYLS 314 (335)
Q Consensus 287 ~~~~~~~~~p~~~~Pt~va~~-~g~lyV~ 314 (335)
+....+.... ....++++. ++++.++
T Consensus 270 -~~~~~~~~h~-~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 270 -EIVQKLQGHT-DVVISTACHPTENIIAS 296 (312)
T ss_dssp -CEEEEECCCS-SCEEEEEECSSSSEEEE
T ss_pred -hhhhhhhccC-CcEEEEeecCcCCceEE
Confidence 2333343221 223456664 5555543
No 143
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.91 E-value=3e-07 Score=84.55 Aligned_cols=198 Identities=10% Similarity=0.020 Sum_probs=129.6
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
.-.+++|+++|+++++...++.|..||..+++ .+. .+ .+.. .....+++++++..++++.... +.
T Consensus 129 ~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~----~~~---~~--~~h~-~~V~~~~~~~~~~~~l~s~s~D-----~~ 193 (344)
T 4gqb_B 129 IVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV----VLS---SY--RAHA-AQVTCVAASPHKDSVFLSCSED-----NR 193 (344)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTE----EEE---EE--CCCS-SCEEEEEECSSCTTEEEEEETT-----SC
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCc----EEE---EE--cCcC-CceEEEEecCCCCCceeeeccc-----cc
Confidence 34689999999988888889999999965444 121 22 2211 3567899987555666643321 35
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCC-CcEEEEeCCCCeEEEEccCCc-EEEEecCCcccccccccccccc
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE-GNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAKEWYKNVFGL 207 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~-G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~~~~~~~~~p 207 (335)
|..||.++++........ .. ....+.+++.++ ++++++.+..+.|..+|.... .+..+.. .....
T Consensus 194 v~iwd~~~~~~~~~~~~~--~~-~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~----------h~~~v 260 (344)
T 4gqb_B 194 ILLWDTRCPKPASQIGCS--AP-GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV----------HSQCV 260 (344)
T ss_dssp EEEEETTSSSCEEECC-------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC----------CSSCE
T ss_pred cccccccccceeeeeecc--ee-eccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC----------CCCCE
Confidence 999999988665332221 11 345678899985 578888888899999998643 3222211 11236
Q ss_pred CeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEecCCCeEEEEEcC
Q 039428 208 NGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGNPYPSARLVESS 281 (335)
Q Consensus 208 ~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~~~~~~~v~~~~ 281 (335)
+.++|+|+| +++++-+.++.|..+|...+ ....+ .+ + -.....+++.|+|. ++++....+.+++...+
T Consensus 261 ~~v~fsp~g~~~lasgs~D~~i~vwd~~~~--~~~~~--~~-H-~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 261 TGLVFSPHSVPFLASLSEDCSLAVLDSSLS--ELFRS--QA-H-RDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTCC--EEEEE--CC-C-SSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEEEEccCCCeEEEEEeCCCeEEEEECCCC--cEEEE--cC-C-CCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 899999998 67777778899999999876 33333 23 2 23467899999874 66664434667766654
No 144
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.91 E-value=1.8e-06 Score=80.98 Aligned_cols=202 Identities=10% Similarity=0.091 Sum_probs=132.3
Q ss_pred CCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCC
Q 039428 46 SPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGN 125 (335)
Q Consensus 46 ~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~ 125 (335)
+......+++|+|++++++++..++.|..||..+++. .. .+.... .....+++++ ++.++++....
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~----~~---~l~~h~---~~V~~v~~~~-~~~~l~sgs~D--- 171 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF----ER---TLKGHT---DSVQDISFDH-SGKLLASCSAD--- 171 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCC----CE---EECCCS---SCEEEEEECT-TSSEEEEEETT---
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE----EE---EEeccC---CcEEEEEEcC-CCCEEEEEeCC---
Confidence 3333457899999999888888899999999755542 11 222221 2567899997 56555542211
Q ss_pred ccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC-cEEEEecCCccccccccccc
Q 039428 126 KYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG-QLLSIIRSPLFTAKEWYKNV 204 (335)
Q Consensus 126 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~~~~~~~~~~ 204 (335)
..|..||..+++.... +.+ . ......+++.|+|+.+++.+..+.|..+|... .....+.. ..
T Consensus 172 --~~i~iwd~~~~~~~~~--~~~--h-~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~----------h~ 234 (410)
T 1vyh_C 172 --MTIKLWDFQGFECIRT--MHG--H-DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG----------HR 234 (410)
T ss_dssp --SCCCEEETTSSCEEEC--CCC--C-SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC----------CS
T ss_pred --CeEEEEeCCCCceeEE--EcC--C-CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC----------CC
Confidence 3588999988766532 211 1 34567899999999888888899999999764 33332211 11
Q ss_pred cccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCC--------------------Cc
Q 039428 205 FGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSP--------------------TK 264 (335)
Q Consensus 205 ~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~--------------------g~ 264 (335)
...+.++++++|.++++-..++.|..+|....+ ....+.... .....+++.++ |.
T Consensus 235 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~-~~~~~~~h~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 309 (410)
T 1vyh_C 235 EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE-CKAELREHR----HVVECISWAPESSYSSISEATGSETKKSGKPGP 309 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-EEEEECCCS----SCEEEEEECCSCGGGGGGGCCSCC-------CC
T ss_pred ccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-eeeEecCCC----ceEEEEEEcCcccccchhhhccccccccCCCCC
Confidence 236778999999888888888999999988763 333332111 12345555553 55
Q ss_pred EEEEecCCCeEEEEEcCCC
Q 039428 265 LVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 265 l~va~~~~~~~~v~~~~~~ 283 (335)
++++....+.+++.+...+
T Consensus 310 ~l~sgs~D~~i~iwd~~~~ 328 (410)
T 1vyh_C 310 FLLSGSRDKTIKMWDVSTG 328 (410)
T ss_dssp EEEEEETTSEEEEEETTTT
T ss_pred EEEEEeCCCeEEEEECCCC
Confidence 6666555577888887655
No 145
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.91 E-value=8.6e-07 Score=81.93 Aligned_cols=200 Identities=5% Similarity=0.011 Sum_probs=122.8
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
...+++|+++++.+++...++.|..|| .++.. +. .+.... .....+++++++..|+++..| ..
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~----~~---~~~~~~---~~v~~~~~~~~~~~l~~~~~d------~~ 172 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWN-KTGAL----LN---VLNFHR---APIVSVKWNKDGTHIISMDVE------NV 172 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEE-TTSCE----EE---EECCCC---SCEEEEEECTTSSEEEEEETT------CC
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCe----ee---eccCCC---ccEEEEEECCCCCEEEEEecC------Ce
Confidence 457899999999888888889999998 44541 22 221111 356889999744445553222 34
Q ss_pred EEEEECCCCeEEEEeecCCCc---------------------------------------------------cCCCCCCc
Q 039428 130 LAAYDLSTWKRLFLTQLSGKS---------------------------------------------------EEKSTADD 158 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~---------------------------------------------------~~~~~p~~ 158 (335)
|..||..+++........... ........
T Consensus 173 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~ 252 (425)
T 1r5m_A 173 TILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISV 252 (425)
T ss_dssp EEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEE
T ss_pred EEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEE
Confidence 888998877655332221100 00122345
Q ss_pred eeECCCCcEEEEeCCCCeEEEEccCCc-EEEEecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCc
Q 039428 159 IAVDAEGNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEE 237 (335)
Q Consensus 159 ~~vd~~G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~ 237 (335)
++++++|+.+++....+.|..+|.... ....+. ........++++|++ ++++...++.|..+|+...+
T Consensus 253 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----------~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 253 LEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFY----------GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT 321 (425)
T ss_dssp EEEETTTTEEEEEETTSCEEEECSSSBSCSEEEC----------CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE
T ss_pred EEECCCCCEEEEEcCCCEEEEEECCCCccceEec----------CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc
Confidence 666666665555555666666665432 111110 012246889999999 66777788999999998763
Q ss_pred eeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCC
Q 039428 238 EEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSD 282 (335)
Q Consensus 238 ~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~ 282 (335)
....+.... .....+++.++++++++....+.+++.+...
T Consensus 322 -~~~~~~~~~----~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 322 -LLALSIVDG----VPIFAGRISQDGQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp -EEEEEECTT----CCEEEEEECTTSSEEEEEETTSCEEEEECHH
T ss_pred -EeEecccCC----ccEEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 444444222 2367899999998777755446788887643
No 146
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.91 E-value=1.8e-06 Score=78.67 Aligned_cols=207 Identities=13% Similarity=0.069 Sum_probs=134.1
Q ss_pred EEEcCCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEec
Q 039428 42 YQYHSPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTD 121 (335)
Q Consensus 42 ~~~~~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D 121 (335)
..+.+......+++|+++++++++...++.|..||..+++. +. .+.... .....+++++ +++++++..
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~----~~---~~~~~~---~~v~~~~~s~-~~~~l~s~~- 116 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNK----VH---AIPLRS---SWVMTCAYAP-SGNYVACGG- 116 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE----EE---EEECSS---SCEEEEEECT-TSSEEEEEE-
T ss_pred eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCc----ce---EeecCC---ccEEEEEECC-CCCEEEEEe-
Confidence 34444444567999999999888888899999999654441 11 222221 2467889997 565555422
Q ss_pred CCCCccceEEEEECCCCeE--EEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCc-EEEEecCCccccc
Q 039428 122 VLGNKYSALAAYDLSTWKR--LFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAK 198 (335)
Q Consensus 122 ~~~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~ 198 (335)
.. +.+..||..+++. .....+.+ . ......+.+.+++. +++.+..+.|..+|.... ....+..
T Consensus 117 ~d----~~v~iw~~~~~~~~~~~~~~~~~--h-~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~------ 182 (340)
T 1got_B 117 LD----NICSIYNLKTREGNVRVSRELAG--H-TGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTG------ 182 (340)
T ss_dssp TT----CEEEEEETTTCSBSCEEEEEEEC--C-SSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECC------
T ss_pred CC----CeEEEEECccCCCcceeEEEecC--C-CccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcC------
Confidence 21 3588999876531 11111211 1 23455677777776 455567789999997643 3332211
Q ss_pred cccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEE
Q 039428 199 EWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLV 278 (335)
Q Consensus 199 ~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~ 278 (335)
.......++++|++.++++-..++.|..+|+..++ ....+.... .....+++.++|+++++....+.+++.
T Consensus 183 ----h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~-~~~~~~~h~----~~v~~v~~~p~~~~l~s~s~d~~v~iw 253 (340)
T 1got_B 183 ----HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHE----SDINAICFFPNGNAFATGSDDATCRLF 253 (340)
T ss_dssp ----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS-EEEEECCCS----SCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ----CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-eEEEEcCCc----CCEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 11236789999999888888889999999998764 444443221 236789999999888886655778888
Q ss_pred EcCCC
Q 039428 279 ESSDG 283 (335)
Q Consensus 279 ~~~~~ 283 (335)
+...+
T Consensus 254 d~~~~ 258 (340)
T 1got_B 254 DLRAD 258 (340)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 87654
No 147
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.91 E-value=1.4e-06 Score=80.30 Aligned_cols=209 Identities=10% Similarity=0.052 Sum_probs=139.5
Q ss_pred EcCCCcceeeeEEcCCC-CEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecC
Q 039428 44 YHSPSFLCETAKWDDVG-RRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDV 122 (335)
Q Consensus 44 ~~~~~~~pegia~d~~g-~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~ 122 (335)
+.+......+++|++++ ++++++..++.|..||..++.. .. .+...+. ......+++++.+++++++.. .
T Consensus 69 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----~~---~~~~~~h-~~~v~~~~~~~~~~~~l~s~~-~ 139 (383)
T 3ei3_B 69 ASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK----TS---FIQGMGP-GDAITGMKFNQFNTNQLFVSS-I 139 (383)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTC----EE---EECCCST-TCBEEEEEEETTEEEEEEEEE-T
T ss_pred ccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccc----ce---eeecCCc-CCceeEEEeCCCCCCEEEEEe-C
Confidence 33434456899999999 7777778899999999654441 11 2221111 135689999973445544322 2
Q ss_pred CCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccc
Q 039428 123 LGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYK 202 (335)
Q Consensus 123 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~ 202 (335)
. ..|..||.++.......... ........+++.++|+.+++....+.|..+|.+++....+..
T Consensus 140 d----~~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---------- 202 (383)
T 3ei3_B 140 R----GATTLRDFSGSVIQVFAKTD---SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKL---------- 202 (383)
T ss_dssp T----TEEEEEETTSCEEEEEECCC---CSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEEC----------
T ss_pred C----CEEEEEECCCCceEEEeccC---CCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEecc----------
Confidence 1 36999999876554322211 112456789999999988888888999999998776654321
Q ss_pred cccccCeEEEccCCe-EEEEECCCCEEEEEeCCCCc---eeEEEEeccCCcCCCCCCeEEEcC-CCcEEEEecCCCeEEE
Q 039428 203 NVFGLNGIVYHPDGF-LIVIHMCSGNLFKIDIRKEE---EEVKLIELRGGSSLSLGDGLALLS-PTKLVVAGNPYPSARL 277 (335)
Q Consensus 203 ~~~~p~Gia~~~dg~-Lyvad~~~~~v~~~d~~~~~---~~~~~~~~~g~~~~~~pdGia~d~-~g~l~va~~~~~~~~v 277 (335)
.......++++|++. ++++-..++.|..+|+...+ .....+.. ......+++.+ +|.++++....+.+++
T Consensus 203 h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~~l~~~~~d~~i~i 277 (383)
T 3ei3_B 203 HKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPH-----EKPVNAAYFNPTDSTKLLTTDQRNEIRV 277 (383)
T ss_dssp SSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEEC-----SSCEEEEEECTTTSCEEEEEESSSEEEE
T ss_pred CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecC-----CCceEEEEEcCCCCCEEEEEcCCCcEEE
Confidence 112378999999995 88888889999999998621 13333331 13367899999 8887777554577888
Q ss_pred EEcCCC
Q 039428 278 VESSDG 283 (335)
Q Consensus 278 ~~~~~~ 283 (335)
.+...+
T Consensus 278 wd~~~~ 283 (383)
T 3ei3_B 278 YSSYDW 283 (383)
T ss_dssp EETTBT
T ss_pred EECCCC
Confidence 887544
No 148
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.88 E-value=1.4e-06 Score=80.98 Aligned_cols=212 Identities=14% Similarity=0.061 Sum_probs=134.7
Q ss_pred ceeeeEEcC-CCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 50 LCETAKWDD-VGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 50 ~pegia~d~-~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
...+++|++ ++++++++..++.|..||..++.......+....+.... .....+++++++.+++++.. .. +
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~p~~~~~l~s~~-~d----g 154 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT---KRVGIVAWHPTAQNVLLSAG-CD----N 154 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS---SCEEEEEECSSBTTEEEEEE-TT----S
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC---CeEEEEEECcCCCCEEEEEc-CC----C
Confidence 357899999 888888888899999999655421000000001111111 35688999984334555422 21 3
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCc-EEEEecCCcccccccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAKEWYKNVFGL 207 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~~~~~~~~~p 207 (335)
.|..||.++++......... . ......++++++|+.+++.+..+.|..+|.... ....+... . ....+
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~--~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~-------~~~~~ 223 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDV--H-PDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRP-H-------EGTRP 223 (402)
T ss_dssp CEEEEETTTTEEEEEECTTT--C-CSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECS-S-------CSSSC
T ss_pred EEEEEECCCCCccEEEecCC--C-CCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccC-C-------CCCcc
Confidence 59999999887764432111 1 345678999999988887788899999998744 33322110 0 11236
Q ss_pred CeEEEccCCeEEEEE---CCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEecCCCeEEEEEcCCC
Q 039428 208 NGIVYHPDGFLIVIH---MCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 208 ~Gia~~~dg~Lyvad---~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~~~~~~~v~~~~~~ 283 (335)
..++++++|.++++. ..+++|..+|....+.......... ......+++++++. +++++...+.+++.+...+
T Consensus 224 ~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 224 VHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDT---SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp CEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCC---CSSCEEEEEETTTTEEEEEETTCSCEEEEEECSS
T ss_pred eEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccC---CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCC
Confidence 889999999777666 6788999999987531223333222 13467899999986 4456654577888887654
No 149
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.88 E-value=1.3e-07 Score=89.31 Aligned_cols=205 Identities=9% Similarity=0.043 Sum_probs=131.2
Q ss_pred eeeeEEcCC-CCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 51 CETAKWDDV-GRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 51 pegia~d~~-g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
-.+++|+|. ++++.++..+|.|..||...+.. . ..+...+.. .....|+++|.+++++++.+ . + +.
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~-----~--~~~~~~gH~-~~V~~l~f~p~~~~~l~s~s-~--D--~~ 188 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK-----P--TFIKGIGAG-GSITGLKFNPLNTNQFYASS-M--E--GT 188 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCCSC-----C--EEECCCSSS-CCCCEEEECSSCTTEEEEEC-S--S--SC
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc-----e--eEEEccCCC-CCEEEEEEeCCCCCEEEEEe-C--C--CE
Confidence 568999985 56666668899999998644431 1 122222211 35689999975555555322 1 1 35
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCe
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNG 209 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~G 209 (335)
|..||.+++......... ........++++++|+++++....+.|..+|.+++.... +.. .....+.
T Consensus 189 v~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~-----~~~-----h~~~v~~ 255 (435)
T 4e54_B 189 TRLQDFKGNILRVFASSD---TINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWN-----LRM-----HKKKVTH 255 (435)
T ss_dssp EEEEETTSCEEEEEECCS---SCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCC-----SBC-----CSSCEEE
T ss_pred EEEeeccCCceeEEeccC---CCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEE-----Eec-----ccceEEe
Confidence 999999887655332221 112345678999999999988889999999998765431 111 1123688
Q ss_pred EEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 210 IVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 210 ia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
++++|++ +++++-..++.|..+|+...+.........+ . -.....+++.++|.++++....+.+++.+...+
T Consensus 256 v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~-h-~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 256 VALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLP-H-RHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp EEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCB-C-SSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred eeecCCCceEEEEecCcceeeEEecccccccceEEEeee-c-cccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 9999988 6787777888888888876421111111111 1 122467888899987777554577888876544
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.87 E-value=3.5e-06 Score=84.23 Aligned_cols=206 Identities=13% Similarity=0.082 Sum_probs=122.7
Q ss_pred eeeeEEcCCCCEEEEEe---------------------------------cCCeEEEEECCCCCCCcceeeeeEEeecCC
Q 039428 51 CETAKWDDVGRRFLVSF---------------------------------LDGGVGQVLVPDEYSPGTVLEEVKLVKEDD 97 (335)
Q Consensus 51 pegia~d~~g~~~~~~~---------------------------------~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~ 97 (335)
+.+++|+|+|+.+++.. ...+|+++|..+++ .. .+....
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~-----~~---~~~~~~ 254 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK-----TV---YLQTGE 254 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE-----EE---ECCCCS
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc-----eE---eeccCC
Confidence 47899999999777763 23579999864443 11 111111
Q ss_pred cCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCC-eEEEEeecCCCccCCCCCCceeECC--CCcEEEEeCC-
Q 039428 98 VVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTW-KRLFLTQLSGKSEEKSTADDIAVDA--EGNAYVTDVV- 173 (335)
Q Consensus 98 ~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~p~~~~vd~--~G~lyV~d~~- 173 (335)
.....+..++++|++..|+++..+.... ...|+.+|.+++ +.......... ......+.+++.| ||+++++...
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~-~~~v~~~d~~~g~~~~~~~~~~~~-~~~~~~~~~~~sp~~dg~~l~~~~~~ 332 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQN-ECKVNAYDAETGRFVRTLFVETDK-HYVEPLHPLTFLPGSNNQFIWQSRRD 332 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTSC-EEEEEEEETTTCCEEEEEEEEECS-SCCCCCSCCEECTTCSSEEEEEECTT
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCCC-eeEEEEEECCCCceeeEEEEccCC-CeECccCCceeecCCCCEEEEEEccC
Confidence 1112456889998545577754443222 247999999988 44422211111 0012346789999 9975544332
Q ss_pred -CCeEEEEccCCcEEEEecCCccccccccccccccCe-EEEccCC-eEEEEECCCC----EEEEEeCCCCceeEEEEecc
Q 039428 174 -SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNG-IVYHPDG-FLIVIHMCSG----NLFKIDIRKEEEEVKLIELR 246 (335)
Q Consensus 174 -~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~G-ia~~~dg-~Lyvad~~~~----~v~~~d~~~~~~~~~~~~~~ 246 (335)
..+||.++.+++....+... ...... ++++||| .||++....+ +|++++.+++ ..+.+..
T Consensus 333 g~~~l~~~~~~~~~~~~l~~~----------~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~- 399 (706)
T 2z3z_A 333 GWNHLYLYDTTGRLIRQVTKG----------EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG--KTKDLTP- 399 (706)
T ss_dssp SSCEEEEEETTSCEEEECCCS----------SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC--CCEESCC-
T ss_pred CccEEEEEECCCCEEEecCCC----------CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC--CceeccC-
Confidence 46899999777765533211 011334 7999999 7888877765 8999999876 3333321
Q ss_pred CCcCCCCCCeEEEcCCCcEEEE-ecC---CCeEEEEEcCCC
Q 039428 247 GGSSLSLGDGLALLSPTKLVVA-GNP---YPSARLVESSDG 283 (335)
Q Consensus 247 g~~~~~~pdGia~d~~g~l~va-~~~---~~~~~v~~~~~~ 283 (335)
. .....+++.++|+.++. ... ...+++++...+
T Consensus 400 ~----~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 400 E----SGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp S----SSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred C----CceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 1 22567899999975544 221 134777776544
No 151
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.87 E-value=8.2e-07 Score=83.64 Aligned_cols=195 Identities=13% Similarity=0.158 Sum_probs=120.4
Q ss_pred ceeeeEEcCCCCEEEEEecC---CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCc
Q 039428 50 LCETAKWDDVGRRFLVSFLD---GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNK 126 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~---~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~ 126 (335)
...+++|+|+|+.++....+ ..|+.+|..+++ .. .+...+ .....++++|++..|+++ ....+.
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~-----~~--~l~~~~----~~~~~~~~spdg~~la~~-~~~~g~- 246 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA-----VR--QVASFP----RHNGAPAFSPDGSKLAFA-LSKTGS- 246 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-----EE--EEECCS----SCEEEEEECTTSSEEEEE-ECTTSS-
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc-----EE--EeecCC----CcccCEEEcCCCCEEEEE-EecCCC-
Confidence 45789999999977666433 489999965454 11 132222 246789999844445543 222222
Q ss_pred cceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCC--CCeEEEEccCCcEEEEecCCcccccccccc
Q 039428 127 YSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVV--SSKIWKVGVEGQLLSIIRSPLFTAKEWYKN 203 (335)
Q Consensus 127 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~--~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~ 203 (335)
..|+.+|.++++... +... ......++++|||+ ++++... ..+|+++|.++.....+. ..
T Consensus 247 -~~i~~~d~~~~~~~~---l~~~---~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~---~~------- 309 (415)
T 2hqs_A 247 -LNLYVMDLASGQIRQ---VTDG---RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT---WE------- 309 (415)
T ss_dssp -CEEEEEETTTCCEEE---CCCC---SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECC---CS-------
T ss_pred -ceEEEEECCCCCEEe---CcCC---CCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEe---cC-------
Confidence 469999999887642 2111 23456789999997 5555432 348999998765433221 11
Q ss_pred ccccCeEEEccCC-eEEEEECC--CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEecCCC--eEEE
Q 039428 204 VFGLNGIVYHPDG-FLIVIHMC--SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGNPYP--SARL 277 (335)
Q Consensus 204 ~~~p~Gia~~~dg-~Lyvad~~--~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~~~~--~~~v 277 (335)
......++++||| .|+++... ...|+++|++++ ....+. . . .....+++.++|+ |+++....+ .+++
T Consensus 310 ~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~--~~~~l~--~-~--~~~~~~~~spdg~~l~~~s~~~~~~~l~~ 382 (415)
T 2hqs_A 310 GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG--GVQVLS--S-T--FLDETPSLAPNGTMVIYSSSQGMGSVLNL 382 (415)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC--CEEECC--C-S--SSCEEEEECTTSSEEEEEEEETTEEEEEE
T ss_pred CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCC--CEEEec--C-C--CCcCCeEEcCCCCEEEEEEcCCCccEEEE
Confidence 1235678999999 67766654 358999999887 343332 2 1 1467899999997 444433222 4666
Q ss_pred EEcC
Q 039428 278 VESS 281 (335)
Q Consensus 278 ~~~~ 281 (335)
++..
T Consensus 383 ~d~~ 386 (415)
T 2hqs_A 383 VSTD 386 (415)
T ss_dssp EETT
T ss_pred EECC
Confidence 6654
No 152
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.86 E-value=5.4e-06 Score=74.21 Aligned_cols=200 Identities=7% Similarity=0.016 Sum_probs=129.0
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
-...+++|+|+|+.++++..++.|..||..++. .+. .+.... .....+++.+ +++++++..+. .
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~----~~~---~~~~~~---~~v~~~~~~~-~~~~l~s~s~d-----~ 77 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV----EVR---SIQVTE---TPVRAGKFIA-RKNWIIVGSDD-----F 77 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTE----EEE---EEECCS---SCEEEEEEEG-GGTEEEEEETT-----S
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCc----eeE---EeeccC---CcEEEEEEeC-CCCEEEEECCC-----C
Confidence 346799999999988888889999999965443 111 222221 2456788887 45444432221 4
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCc-EE-EEecCCccccccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ-LL-SIIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~-~~-~~~~~~~~~~~~~~~~~~~ 206 (335)
.|..||.++++....... . ....+.+++.|+++++++.+..+.|..+|.... .. ..+.. ....
T Consensus 78 ~i~vwd~~~~~~~~~~~~----h-~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~----------h~~~ 142 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEA----H-PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG----------HEHF 142 (304)
T ss_dssp EEEEEETTTCCEEEEEEC----C-SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECC----------CCSC
T ss_pred EEEEEECCCCcEEEEEeC----C-CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcc----------cCCc
Confidence 699999998876643322 1 345678999999998888888999999997643 22 22211 1123
Q ss_pred cCeEEEcc-CCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcC--CCcEEEEecCCCeEEEEEcCCC
Q 039428 207 LNGIVYHP-DGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLS--PTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 207 p~Gia~~~-dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~--~g~l~va~~~~~~~~v~~~~~~ 283 (335)
...++++| ++.++++-..++.|..+|+.... ....+.. + . .....-+.+.+ ++.++++....+.+++.+...+
T Consensus 143 v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~-~~~~~~~-~-~-~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~ 218 (304)
T 2ynn_A 143 VMCVAFNPKDPSTFASGCLDRTVKVWSLGQST-PNFTLTT-G-Q-ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (304)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEETTCSS-CSEEEEC-C-C-TTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEECCCCC-ccceecc-C-C-cCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC
Confidence 67899999 56788888889999999987653 2222221 1 1 01123445543 5666666554577888887654
No 153
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.86 E-value=1.3e-06 Score=79.92 Aligned_cols=204 Identities=13% Similarity=0.123 Sum_probs=126.9
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
....++|+|+|++++++..++.|..||..++.. ... ..+ ..+.. .....++++| +++++++.... ..
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~----~~~-~~~-~~~h~-~~v~~~~~sp-~g~~l~s~s~D-----~~ 84 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSW----ICK-SVL-SEGHQ-RTVRKVAWSP-CGNYLASASFD-----AT 84 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEE----EEE-EEE-CSSCS-SCEEEEEECT-TSSEEEEEETT-----SC
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcc----eee-eee-ccccC-CcEEEEEECC-CCCEEEEEECC-----Cc
Confidence 356899999999888888899999998543321 111 111 11111 3568899998 55554432211 34
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCc-EEEEecCCccccccccccccccC
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~~~~~~~~~p~ 208 (335)
+..||..++.......+.+. ....+.+++.|+|+++++.+..+.|..+|.+.. ....+. .+.. ......
T Consensus 85 v~iw~~~~~~~~~~~~~~~h---~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~--~~~~-----h~~~v~ 154 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGH---ENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVS--VLNS-----HTQDVK 154 (345)
T ss_dssp EEEEEECCC-EEEEEEECCC---SSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEE--EECC-----CCSCEE
T ss_pred EEEEEccCCCeEEEEEccCC---CCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEE--EecC-----cCCCeE
Confidence 88888876654322333221 345678999999999988888888988887532 111110 0110 112367
Q ss_pred eEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEE
Q 039428 209 GIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVE 279 (335)
Q Consensus 209 Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~ 279 (335)
.++++|++.++++-..++.|..++...++ ......+.+ . -.....++++++|+++++....+.+++.+
T Consensus 155 ~~~~~p~~~~l~s~s~d~~i~~w~~~~~~-~~~~~~~~~-h-~~~v~~l~~sp~g~~l~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 155 HVVWHPSQELLASASYDDTVKLYREEEDD-WVCCATLEG-H-ESTVWSLAFDPSGQRLASCSDDRTVRIWR 222 (345)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEEEETTE-EEEEEEECC-C-SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEECCCCCEEEEEeCCCcEEEEEecCCC-EEEEEEecC-C-CCceEEEEECCCCCEEEEEeCCCeEEEec
Confidence 89999999777777778888888877652 122222223 2 23467899999998777755456677765
No 154
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.86 E-value=1.1e-07 Score=87.59 Aligned_cols=207 Identities=13% Similarity=0.155 Sum_probs=123.8
Q ss_pred ceeeeEEcCCCCEEEEEec------CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCC
Q 039428 50 LCETAKWDDVGRRFLVSFL------DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVL 123 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~------~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~ 123 (335)
...+++|+|+|++++.+.. +++|..++..++....+... ...... .....+++.+ +++++++..|
T Consensus 44 ~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~--~~~~~~----~~V~~~~~s~-d~~~l~~s~d-- 114 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCT--AGVQTE----AGVTDVAWVS-EKGILVASDS-- 114 (357)
T ss_dssp EEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCS--EEEECS----SCEEEEEEET-TTEEEEEETT--
T ss_pred CEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEec--ccCCCC----CCEEEEEEcC-CCCEEEEECC--
Confidence 3578999999998887743 67899997654431000000 011111 2467899997 6788775433
Q ss_pred CCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcE-EEEecCCccccccccc
Q 039428 124 GNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQL-LSIIRSPLFTAKEWYK 202 (335)
Q Consensus 124 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~-~~~~~~~~~~~~~~~~ 202 (335)
+.|..||..+++..........+. ....+.+++.|+|+..++.+..+.|..+|..... ...+..
T Consensus 115 ----g~v~lWd~~~~~~~~~~~~~~~~h-~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~---------- 179 (357)
T 4g56_B 115 ----GAVELWEILEKESLLVNKFAKYEH-DDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA---------- 179 (357)
T ss_dssp ----SCEEEC--------CCCCEEECCC-SSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECC----------
T ss_pred ----CEEEEeeccccceeEEEeeccCCC-CCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC----------
Confidence 359999988765431111100011 2456789999999988888888999999987543 332211
Q ss_pred cccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCC-cEEEEecCCCeEEEEEc
Q 039428 203 NVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPT-KLVVAGNPYPSARLVES 280 (335)
Q Consensus 203 ~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g-~l~va~~~~~~~~v~~~ 280 (335)
.....+.+++++++ .++++...+++|..+|+..++ ....+.... . -..+..+++.|++ .++++....+.+++.+.
T Consensus 180 h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~-~~~~~~~~~-~-~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~ 256 (357)
T 4g56_B 180 HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPK-PATRIDFCA-S-DTIPTSVTWHPEKDDTFACGDETGNVSLVNI 256 (357)
T ss_dssp CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSS-CBCBCCCTT-C-CSCEEEEEECTTSTTEEEEEESSSCEEEEES
T ss_pred CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCc-eeeeeeecc-c-cccccchhhhhcccceEEEeecccceeEEEC
Confidence 11236789999988 678888888999999988763 222222211 1 1335678888874 66666544467888886
Q ss_pred CCC
Q 039428 281 SDG 283 (335)
Q Consensus 281 ~~~ 283 (335)
..+
T Consensus 257 ~~~ 259 (357)
T 4g56_B 257 KNP 259 (357)
T ss_dssp SCG
T ss_pred CCC
Confidence 544
No 155
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.86 E-value=4.2e-06 Score=75.65 Aligned_cols=197 Identities=13% Similarity=0.097 Sum_probs=123.7
Q ss_pred CCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCC
Q 039428 46 SPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGN 125 (335)
Q Consensus 46 ~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~ 125 (335)
+......+++|+++++.+++...++.|..||..+++ .+. .+..+ .....+++++++..++++..+....
T Consensus 72 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~----~~~---~~~~~----~~v~~~~~~~~~~~l~~~~~~~~~~ 140 (369)
T 3zwl_B 72 GHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQ----CVA---TWKSP----VPVKRVEFSPCGNYFLAILDNVMKN 140 (369)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC----EEE---EEECS----SCEEEEEECTTSSEEEEEECCBTTB
T ss_pred hcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc----EEE---EeecC----CCeEEEEEccCCCEEEEecCCccCC
Confidence 333446789999999988888889999999965454 122 22222 3568899998444444433221111
Q ss_pred ccceEEEEECCCCeEE---EEeecCC-----CccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC--cEEEEecCCcc
Q 039428 126 KYSALAAYDLSTWKRL---FLTQLSG-----KSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG--QLLSIIRSPLF 195 (335)
Q Consensus 126 ~~~~v~~~d~~~~~~~---~~~~~~~-----~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g--~~~~~~~~~~~ 195 (335)
...|..||.+.+... ....... ..........++++++|+.+++....+.|..+|... +....+..
T Consensus 141 -~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--- 216 (369)
T 3zwl_B 141 -PGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL--- 216 (369)
T ss_dssp -CCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC---
T ss_pred -CCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec---
Confidence 135888887544211 1100000 000122667899999998777777889999999875 33332211
Q ss_pred ccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEec
Q 039428 196 TAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGN 270 (335)
Q Consensus 196 ~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~ 270 (335)
.......++++|++.++++-..++.|..+|....+ ....+... .....+++.+++..+++..
T Consensus 217 -------~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~l~~~~ 278 (369)
T 3zwl_B 217 -------HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ-VLKKYETD-----CPLNTAVITPLKEFIILGG 278 (369)
T ss_dssp -------CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-EEEEEECS-----SCEEEEEECSSSSEEEEEE
T ss_pred -------CCCceeEEEECCCCCEEEEecCCceEEEEECCCCc-eeeeecCC-----CCceeEEecCCCceEEEee
Confidence 11237889999999766666788999999998864 44555422 2356899999987666643
No 156
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.85 E-value=2.4e-06 Score=80.12 Aligned_cols=198 Identities=9% Similarity=0.055 Sum_probs=130.6
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
...+++|+++|++++++..++.|..||..+++ .+. . ..+.. .....++++| +++.+++.. . + ..
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~----~~~---~--~~~h~-~~V~~v~~~p-~~~~l~s~s-~--D--~~ 215 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFE----CIR---T--MHGHD-HNVSSVSIMP-NGDHIVSAS-R--D--KT 215 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSC----EEE---C--CCCCS-SCEEEEEECS-SSSEEEEEE-T--T--SE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc----eeE---E--EcCCC-CCEEEEEEeC-CCCEEEEEe-C--C--Ce
Confidence 45789999999988888889999999864333 111 1 12211 3567899997 555444322 1 1 36
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCc-EEEEecCCccccccccccccccC
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~~~~~~~~~p~ 208 (335)
|..||.+++........ . ....+.+.++++|+++++.+..+.|..+|.... ....+.. .....+
T Consensus 216 i~~wd~~~~~~~~~~~~--h---~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~----------h~~~v~ 280 (410)
T 1vyh_C 216 IKMWEVQTGYCVKTFTG--H---REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE----------HRHVVE 280 (410)
T ss_dssp EEEEETTTCCEEEEEEC--C---SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC----------CSSCEE
T ss_pred EEEEECCCCcEEEEEeC--C---CccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecC----------CCceEE
Confidence 99999998876533221 1 234567899999999998888899999997643 3222211 011256
Q ss_pred eEEEccC--------------------CeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEE
Q 039428 209 GIVYHPD--------------------GFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVA 268 (335)
Q Consensus 209 Gia~~~d--------------------g~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va 268 (335)
.++++|+ |.++++-+.++.|..+|+..++ ....+. + . -....++++.++|.++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~-~~~~~~--~-h-~~~v~~v~~~~~g~~l~s 355 (410)
T 1vyh_C 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-CLMTLV--G-H-DNWVRGVLFHSGGKFILS 355 (410)
T ss_dssp EEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE-EEEEEE--C-C-SSCEEEEEECSSSSCEEE
T ss_pred EEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc-eEEEEE--C-C-CCcEEEEEEcCCCCEEEE
Confidence 6777765 5567777788999999998763 333343 2 1 133578999999987777
Q ss_pred ecCCCeEEEEEcCCC
Q 039428 269 GNPYPSARLVESSDG 283 (335)
Q Consensus 269 ~~~~~~~~v~~~~~~ 283 (335)
....+.+++.+...+
T Consensus 356 ~s~D~~i~vwd~~~~ 370 (410)
T 1vyh_C 356 CADDKTLRVWDYKNK 370 (410)
T ss_dssp EETTTEEEEECCTTS
T ss_pred EeCCCeEEEEECCCC
Confidence 554577888876543
No 157
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.84 E-value=1.7e-05 Score=72.74 Aligned_cols=235 Identities=16% Similarity=0.133 Sum_probs=141.7
Q ss_pred EEcCCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCc------------------------
Q 039428 43 QYHSPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDV------------------------ 98 (335)
Q Consensus 43 ~~~~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~------------------------ 98 (335)
.+.+......+++|++++++++++..++.|..||...++. .. .+..+..
T Consensus 59 ~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~----~~---~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~ 131 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNK----EH---AVTMPCTWVMACAYAPSGCAIACGGLDNKCS 131 (354)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE----EE---EEECSSSCCCEEEECTTSSEEEEESTTSEEE
T ss_pred EecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCc----ce---EEecCCCCEEEEEECCCCCEEEEeeCCCCEE
Confidence 3444444568999999999888888899999998644431 11 1111100
Q ss_pred ---------------------CCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCC
Q 039428 99 ---------------------VGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTAD 157 (335)
Q Consensus 99 ---------------------~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~ 157 (335)
.......+.+.+++..|+.+..| ..|..||.++++....... . .....
T Consensus 132 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D------~~v~lwd~~~~~~~~~~~~--h---~~~v~ 200 (354)
T 2pbi_B 132 VYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGD------GTCALWDVESGQLLQSFHG--H---GADVL 200 (354)
T ss_dssp EEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEEEEC--C---SSCEE
T ss_pred EEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCC------CcEEEEeCCCCeEEEEEcC--C---CCCeE
Confidence 00123456666533344443222 3588899988876533322 1 22344
Q ss_pred ceeECC--CCcEEEEeCCCCeEEEEccC-CcEEEEecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCC
Q 039428 158 DIAVDA--EGNAYVTDVVSSKIWKVGVE-GQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIR 234 (335)
Q Consensus 158 ~~~vd~--~G~lyV~d~~~~~I~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~ 234 (335)
.+++.+ +|+.+++.+..+.|..+|.. ++....+.. .....+.++++|++.++++-..++.|..+|+.
T Consensus 201 ~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~----------h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~ 270 (354)
T 2pbi_B 201 CLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFET----------HESDVNSVRYYPSGDAFASGSDDATCRLYDLR 270 (354)
T ss_dssp EEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECC----------CSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecC----------CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 566655 57888888888999999976 444432211 11237899999999878888888999999998
Q ss_pred CCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe-CCeEEE
Q 039428 235 KEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATVK-DGRVYL 313 (335)
Q Consensus 235 ~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~-~g~lyV 313 (335)
..+ ....+.... . ......+++.++|.++++....+.+++.+...+-. ...+.+. ....+++++. +++..+
T Consensus 271 ~~~-~~~~~~~~~-~-~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~----~~~l~~h-~~~v~~l~~spdg~~l~ 342 (354)
T 2pbi_B 271 ADR-EVAIYSKES-I-IFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR----VSILFGH-ENRVSTLRVSPDGTAFC 342 (354)
T ss_dssp TTE-EEEEECCTT-C-CSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE----EEEECCC-SSCEEEEEECTTSSCEE
T ss_pred CCc-EEEEEcCCC-c-ccceeEEEEeCCCCEEEEEECCCcEEEEECCCCce----EEEEECC-CCcEEEEEECCCCCEEE
Confidence 763 333333211 1 12346788999998887765557788888755422 2222222 1224567774 555444
No 158
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.84 E-value=8.3e-06 Score=73.56 Aligned_cols=197 Identities=11% Similarity=0.131 Sum_probs=127.0
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
.....++++++|+.+++...++.|..||..+++ .+. .+. ... .....+++++ ++.++++.... .
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~----~~~--~~~-~h~---~~v~~~~~~~-~~~~l~s~s~D-----~ 129 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASWDKTLRLWDVATGE----TYQ--RFV-GHK---SDVMSVDIDK-KASMIISGSRD-----K 129 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTE----EEE--EEE-CCS---SCEEEEEECT-TSCEEEEEETT-----S
T ss_pred ccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC----eeE--EEc-cCC---CcEEEEEEcC-CCCEEEEEeCC-----C
Confidence 345678999999988888889999999975554 111 121 111 2467899997 55555532211 3
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECC------CCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA------EGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYK 202 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~------~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~ 202 (335)
.|..||.++..+.... +. ......+++.| ++..+++.+..+.|..+|........ .+..
T Consensus 130 ~i~vwd~~~~~~~~~~---~h---~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~----~~~~----- 194 (319)
T 3frx_A 130 TIKVWTIKGQCLATLL---GH---NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEA----DFIG----- 194 (319)
T ss_dssp CEEEEETTSCEEEEEC---CC---SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEE----EECC-----
T ss_pred eEEEEECCCCeEEEEe---cc---CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhhe----eecC-----
Confidence 5999999765443211 11 22344566655 45577787888999999987543321 1111
Q ss_pred cccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCC
Q 039428 203 NVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSD 282 (335)
Q Consensus 203 ~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~ 282 (335)
.....+.++++|+|.++++-..++.|..+|+...+ ....+... .....+++.+++.++++... +.+++.....
T Consensus 195 h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~-----~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~ 267 (319)
T 3frx_A 195 HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK-AMYTLSAQ-----DEVFSLAFSPNRYWLAAATA-TGIKVFSLDP 267 (319)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE-EEEEEECC-----SCEEEEEECSSSSEEEEEET-TEEEEEEETT
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-EEEEecCC-----CcEEEEEEcCCCCEEEEEcC-CCcEEEEeCc
Confidence 11237899999999888888889999999998874 44444422 23578999999986666442 5677777654
Q ss_pred C
Q 039428 283 G 283 (335)
Q Consensus 283 ~ 283 (335)
.
T Consensus 268 ~ 268 (319)
T 3frx_A 268 Q 268 (319)
T ss_dssp E
T ss_pred C
Confidence 3
No 159
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.84 E-value=3.6e-07 Score=84.20 Aligned_cols=199 Identities=9% Similarity=0.034 Sum_probs=128.5
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
...+++|+|+|+.+++...++.|..||..+++ .+. .+.... .....+++.++++.++++.... ..
T Consensus 141 ~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~----~~~---~~~~h~---~~v~~v~~s~~~~~~~~s~~~d-----g~ 205 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA----VLK---SYNAHS---SEVNCVAACPGKDTIFLSCGED-----GR 205 (357)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTTE----EEE---EECCCS---SCEEEEEECTTCSSCEEEEETT-----SC
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCc----EEE---EEcCCC---CCEEEEEEccCCCceeeeeccC-----Cc
Confidence 35789999999988888889999999965443 111 221111 3567899987544555543221 35
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCC-CcEEEEeCCCCeEEEEccCC-cEEEEecCCcccccccccccccc
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE-GNAYVTDVVSSKIWKVGVEG-QLLSIIRSPLFTAKEWYKNVFGL 207 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~-G~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~~~~~~~~~~~~p 207 (335)
|..||.++++........ .....+..+++.|+ ++++++....+.|..+|... +....+. . .....
T Consensus 206 v~~wd~~~~~~~~~~~~~---~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~-----~-----~~~~v 272 (357)
T 4g56_B 206 ILLWDTRKPKPATRIDFC---ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA-----V-----HSQNI 272 (357)
T ss_dssp EEECCTTSSSCBCBCCCT---TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC-----C-----CSSCE
T ss_pred eEEEECCCCceeeeeeec---cccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe-----c-----cceeE
Confidence 999999887654222221 11345678999987 46787777888999999763 3332221 1 11236
Q ss_pred CeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcC-CCcEEEEecCCCeEEEEEcCC
Q 039428 208 NGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLS-PTKLVVAGNPYPSARLVESSD 282 (335)
Q Consensus 208 ~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~-~g~l~va~~~~~~~~v~~~~~ 282 (335)
+.++++|++ +++++-..++.|..+|.+.++ ..+.+ + . -....++++.| ++.++++....+.+++.+...
T Consensus 273 ~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~-~~~~~---~-H-~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 273 TGLAYSYHSSPFLASISEDCTVAVLDADFSE-VFRDL---S-H-RDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTSCE-EEEEC---C-C-SSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEEEEcCCCCCEEEEEeCCCEEEEEECCCCc-EeEEC---C-C-CCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 889999988 677777778899999998762 22222 2 2 13367899987 677777755456788777643
No 160
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.84 E-value=1.2e-06 Score=81.24 Aligned_cols=199 Identities=15% Similarity=0.110 Sum_probs=129.1
Q ss_pred ceeeeEEcCCCCEEEEEec---------------CCeEEEEECCCC--CCCcceeeeeEEeecCCc-C--CCCcceEEEe
Q 039428 50 LCETAKWDDVGRRFLVSFL---------------DGGVGQVLVPDE--YSPGTVLEEVKLVKEDDV-V--GNATMGIAVD 109 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~---------------~~~I~~~d~~~g--~~~~~v~~~~~~~~~~~~-~--~~~p~Gi~~d 109 (335)
...++.+|+.+++|+++.. ..+|..+|..+. + ++. .+..|.. . ....+.|++|
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~----li~---~y~~p~~~~~~~S~l~di~VD 160 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYP----EVV---RYYFPTRLVEKPTYFGGFAVD 160 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCC----EEE---EEECCGGGCCCGGGEEEEEEE
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCce----eEE---EEECCHHhcccCCccceEEEe
Confidence 4578899999999999921 136999997655 4 233 2233321 1 1235789999
Q ss_pred -CC------CCeEEEEEecCCCCccceEEEEECCCCeEEEEeecC-CC---------ccC---CCCCCceeECCC----C
Q 039428 110 -RP------RNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLS-GK---------SEE---KSTADDIAVDAE----G 165 (335)
Q Consensus 110 -~~------~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~-~~---------~~~---~~~p~~~~vd~~----G 165 (335)
.+ ++.+|+ +|... ..|++||.++++-....+-. .+ +.. .....+|+.+|+ +
T Consensus 161 ~~~~~~~c~~~~aYI--tD~~~---~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~ 235 (381)
T 3q6k_A 161 VANPKGDCSETFVYI--TNFLR---GALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGN 235 (381)
T ss_dssp ESCTTTTSCSEEEEE--EETTT---TEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSC
T ss_pred cccCCCCCCccEEEE--EcCCC---CcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCC
Confidence 31 467888 67643 46999999988765333210 01 111 136678999886 4
Q ss_pred -cEEEEeCCCCeEEEEccC----Cc---EEEEecCCccccccccccccccCeEEEc-cCCeEEEEECCCCEEEEEeCCC-
Q 039428 166 -NAYVTDVVSSKIWKVGVE----GQ---LLSIIRSPLFTAKEWYKNVFGLNGIVYH-PDGFLIVIHMCSGNLFKIDIRK- 235 (335)
Q Consensus 166 -~lyV~d~~~~~I~~~d~~----g~---~~~~~~~~~~~~~~~~~~~~~p~Gia~~-~dg~Lyvad~~~~~v~~~d~~~- 235 (335)
.+|+.-..+.++|++..+ .. ..+.++.. +......++++| .+|.||+++...+.|.+.++++
T Consensus 236 ~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~k--------g~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 307 (381)
T 3q6k_A 236 RPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNR--------GKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKM 307 (381)
T ss_dssp CEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEEC--------CTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSC
T ss_pred eEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeec--------CCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCC
Confidence 599988777899998742 11 11111110 000112356786 6789999999999999999987
Q ss_pred C--ceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEec
Q 039428 236 E--EEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGN 270 (335)
Q Consensus 236 ~--~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~ 270 (335)
. .+....+.... . +..|++|.++.+|.||+..+
T Consensus 308 ~~~~~n~~~l~~d~-~-l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 308 PLRMKNTDVVYTSS-R-FVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp SBCGGGEEEEEECT-T-CCSEEEEEECTTSCEEEEEC
T ss_pred ccccCceEEEEECC-C-ccccCeEEECCCCeEEEEEC
Confidence 3 01445554333 3 78899999999999999966
No 161
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.83 E-value=4.3e-06 Score=76.68 Aligned_cols=202 Identities=13% Similarity=0.106 Sum_probs=128.7
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceE
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSAL 130 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v 130 (335)
-.+++|.+++. ++++..++.|..||..+++. ....... ..+.. .....+++++ +++.+++.... ..|
T Consensus 85 v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~----~~~~~~~-~~~H~-~~V~~v~~sp-dg~~l~sgs~d-----~~i 151 (344)
T 4gqb_B 85 VADLTWVGERG-ILVASDSGAVELWELDENET----LIVSKFC-KYEHD-DIVSTVSVLS-SGTQAVSGSKD-----ICI 151 (344)
T ss_dssp EEEEEEETTTE-EEEEETTSEEEEEEECTTSS----CEEEEEE-EECCS-SCEEEEEECT-TSSEEEEEETT-----SCE
T ss_pred EEEEEEeCCCe-EEEEECCCEEEEEeccCCCc----eeEeecc-ccCCC-CCEEEEEECC-CCCEEEEEeCC-----CeE
Confidence 35789999864 55667789999998655542 1110111 11111 3568999998 56555542211 359
Q ss_pred EEEECCCCeEEEEeecCCCccCCCCCCceeECCCC-cEEEEeCCCCeEEEEccCC-cEEEEecCCccccccccccccccC
Q 039428 131 AAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEG-NAYVTDVVSSKIWKVGVEG-QLLSIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G-~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~~~~~~~~~~~~p~ 208 (335)
..||.++++....... . ....+.+++.+++ +++++.+..+.|..+|... +....+.. . ......+
T Consensus 152 ~iwd~~~~~~~~~~~~--h---~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~---~-----~~~~~~~ 218 (344)
T 4gqb_B 152 KVWDLAQQVVLSSYRA--H---AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC---S-----APGYLPT 218 (344)
T ss_dssp EEEETTTTEEEEEECC--C---SSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC------------CCCEE
T ss_pred EEEECCCCcEEEEEcC--c---CCceEEEEecCCCCCceeeeccccccccccccccceeeeeec---c-----eeeccce
Confidence 9999999887643321 1 3456789999987 5888888889999999763 33332211 0 0122367
Q ss_pred eEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCC-cEEEEecCCCeEEEEEcCCC
Q 039428 209 GIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPT-KLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 209 Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g-~l~va~~~~~~~~v~~~~~~ 283 (335)
.++++|++ +++++-..++.|..+|+..++ .+..+.... .....+++.++| +++++....+.+++.+...+
T Consensus 219 ~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~-~~~~~~~h~----~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 219 SLAWHPQQSEVFVFGDENGTVSLVDTKSTS-CVLSSAVHS----QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEESCC---CCEEEECCS----SCEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred eeeecCCCCcceEEeccCCcEEEEECCCCc-EEEEEcCCC----CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 89999965 888888889999999998764 444444222 235789999987 55655544467888876543
No 162
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.82 E-value=9.2e-07 Score=80.50 Aligned_cols=204 Identities=10% Similarity=0.030 Sum_probs=130.3
Q ss_pred CCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCc
Q 039428 47 PSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNK 126 (335)
Q Consensus 47 ~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~ 126 (335)
......+++|+++++.+++...++.|..||..+++. .. ....... ......+++++++..|+++..|
T Consensus 51 h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~----~~---~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d----- 117 (372)
T 1k8k_C 51 HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW----KP---TLVILRI-NRAARCVRWAPNEKKFAVGSGS----- 117 (372)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE----EE---EEECCCC-SSCEEEEEECTTSSEEEEEETT-----
T ss_pred CCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCee----ee---eEEeecC-CCceeEEEECCCCCEEEEEeCC-----
Confidence 334467899999999888888889999998643431 11 1111111 1356889999744444443222
Q ss_pred cceEEEEECCCCeEE-EEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccC-------------------CcE
Q 039428 127 YSALAAYDLSTWKRL-FLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVE-------------------GQL 186 (335)
Q Consensus 127 ~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~-------------------g~~ 186 (335)
+.|..||.+++... ....... .. ......+++.++|+.+++....+.|..+|.. ++.
T Consensus 118 -~~v~i~d~~~~~~~~~~~~~~~-~~-~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (372)
T 1k8k_C 118 -RVISICYFEQENDWWVCKHIKK-PI-RSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL 194 (372)
T ss_dssp -SSEEEEEEETTTTEEEEEEECT-TC-CSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCE
T ss_pred -CEEEEEEecCCCcceeeeeeec-cc-CCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhh
Confidence 24778887665421 1111111 11 3456789999999988888888999999843 333
Q ss_pred EEEecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEE
Q 039428 187 LSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLV 266 (335)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~ 266 (335)
...+. ......+.++++|++.++++-..++.|..+|....+ ....+.... .....+++.+++.++
T Consensus 195 ~~~~~----------~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~----~~v~~~~~~~~~~~l 259 (372)
T 1k8k_C 195 MFESS----------SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM-AVATLASET----LPLLAVTFITESSLV 259 (372)
T ss_dssp EEECC----------CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT-EEEEEECSS----CCEEEEEEEETTEEE
T ss_pred eEecC----------CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc-eeEEEccCC----CCeEEEEEecCCCEE
Confidence 33221 012237899999999666666788999999998764 555554322 235789999999877
Q ss_pred EEecCCCeEEEEEcCC
Q 039428 267 VAGNPYPSARLVESSD 282 (335)
Q Consensus 267 va~~~~~~~~v~~~~~ 282 (335)
++.. .+.+++.+...
T Consensus 260 ~~~~-d~~i~i~~~~~ 274 (372)
T 1k8k_C 260 AAGH-DCFPVLFTYDS 274 (372)
T ss_dssp EEET-TSSCEEEEEET
T ss_pred EEEe-CCeEEEEEccC
Confidence 7763 46677777654
No 163
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.82 E-value=2.7e-05 Score=72.30 Aligned_cols=196 Identities=13% Similarity=0.073 Sum_probs=131.4
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
....+++|+++++.++++..++.|..||..+++ .+. .+.... .....+.++ ...++.+..| +
T Consensus 135 ~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~----~~~---~~~~~~---~~v~~~~~~--~~~l~~~~~d------g 196 (401)
T 4aez_A 135 TYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT----KLR---TMAGHQ---ARVGCLSWN--RHVLSSGSRS------G 196 (401)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEETTTCC----EEE---EECCCS---SCEEEEEEE--TTEEEEEETT------S
T ss_pred CCEEEEEECCCCCEEEEECCCCeEEEEECcCCe----EEE---EecCCC---CceEEEEEC--CCEEEEEcCC------C
Confidence 346799999999988888889999999965444 122 221111 245678886 3455553222 4
Q ss_pred eEEEEECCC-CeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCc-EEEEecCCccccccccccccc
Q 039428 129 ALAAYDLST-WKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 129 ~v~~~d~~~-~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~~~~~~~~~ 206 (335)
.|..||.+. +........ . ......+++.++|+.+++.+..+.|..+|.... ....+.. ....
T Consensus 197 ~i~i~d~~~~~~~~~~~~~----~-~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~----------~~~~ 261 (401)
T 4aez_A 197 AIHHHDVRIANHQIGTLQG----H-SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTN----------HNAA 261 (401)
T ss_dssp EEEEEETTSSSCEEEEEEC----C-SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECC----------CSSC
T ss_pred CEEEEecccCcceeeEEcC----C-CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecC----------Ccce
Confidence 699999984 333322211 1 345678999999998888888899999998743 3332211 1223
Q ss_pred cCeEEEccCC-eEEEEEC--CCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEE--ecCCCeEEEEEcC
Q 039428 207 LNGIVYHPDG-FLIVIHM--CSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVA--GNPYPSARLVESS 281 (335)
Q Consensus 207 p~Gia~~~dg-~Lyvad~--~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va--~~~~~~~~v~~~~ 281 (335)
...++++|++ +++++.. .++.|..+|...++ ....+... .....+++.+++..+++ +...+.+++.+..
T Consensus 262 v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~-~~~~~~~~-----~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 262 VKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA-RVNTVDAG-----SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp CCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC-EEEEEECS-----SCEEEEEECSSSSEEEEEECTTTCEEEEEEEE
T ss_pred EEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC-EEEEEeCC-----CcEEEEEECCCCCeEEEEeecCCCcEEEEecC
Confidence 7899999988 7887755 68999999998764 45555432 23678999999976666 3345778888765
Q ss_pred CC
Q 039428 282 DG 283 (335)
Q Consensus 282 ~~ 283 (335)
.+
T Consensus 336 ~~ 337 (401)
T 4aez_A 336 SS 337 (401)
T ss_dssp TT
T ss_pred Cc
Confidence 54
No 164
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.82 E-value=3.5e-06 Score=85.31 Aligned_cols=200 Identities=7% Similarity=-0.002 Sum_probs=134.3
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
-...+++|+|+|+.++++..++.|..||..++. .+. .+.... .....+++++ ++..+++..+. +
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~----~~~---~~~~~~---~~v~~~~~s~-~~~~l~~~~~d-----g 77 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQV----EVR---SIQVTE---TPVRAGKFIA-RKNWIIVGSDD-----F 77 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTE----EEE---EEECCS---SCEEEEEEEG-GGTEEEEEETT-----S
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEECCCCc----eEE---EEecCC---CcEEEEEEeC-CCCEEEEEeCC-----C
Confidence 346899999999988888888999999965444 122 222221 3568999998 55544432321 4
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCc--EEEEecCCccccccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ--LLSIIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~--~~~~~~~~~~~~~~~~~~~~~ 206 (335)
.|.+||..+++....... . ......+++.|+|...++.+..+.|..++.+.. ....+.. ....
T Consensus 78 ~i~vw~~~~~~~~~~~~~----~-~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~----------~~~~ 142 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEA----H-PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG----------HEHF 142 (814)
T ss_dssp EEEEEETTTCCEEEEEEC----C-SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC----------CSSC
T ss_pred eEEEEECCCCcEEEEEec----C-CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC----------CCCc
Confidence 699999998876643322 1 345678999999987777777889999987643 2222211 1123
Q ss_pred cCeEEEcc-CCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcC--CCcEEEEecCCCeEEEEEcCCC
Q 039428 207 LNGIVYHP-DGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLS--PTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 207 p~Gia~~~-dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~--~g~l~va~~~~~~~~v~~~~~~ 283 (335)
...++++| ++.++++-..++.|..+|..... ....+.... ......+++.+ ++.++++....+.+++.+...+
T Consensus 143 v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~-~~~~~~~~~---~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 218 (814)
T 3mkq_A 143 VMCVAFNPKDPSTFASGCLDRTVKVWSLGQST-PNFTLTTGQ---ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (814)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEETTCSS-CSEEEECCC---TTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT
T ss_pred EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-ceeEEecCC---CCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 67899999 77777777788999999987753 333333211 13367888887 7877777554577888876554
No 165
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.80 E-value=3.3e-06 Score=77.52 Aligned_cols=195 Identities=11% Similarity=0.123 Sum_probs=128.6
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCC-CCeEEEEEecCCCCccc
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRP-RNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~-~g~l~v~~~D~~~~~~~ 128 (335)
....++|.++++.++++..+++|..||..+++ .+. .+.... .....+.+.+. +++++++.. .. .
T Consensus 156 ~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~----~~~---~~~~h~---~~v~~~~~~~~~~g~~l~sgs-~D----g 220 (354)
T 2pbi_B 156 YLSACSFTNSDMQILTASGDGTCALWDVESGQ----LLQ---SFHGHG---ADVLCLDLAPSETGNTFVSGG-CD----K 220 (354)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTCC----EEE---EEECCS---SCEEEEEECCCSSCCEEEEEE-TT----S
T ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe----EEE---EEcCCC---CCeEEEEEEeCCCCCEEEEEe-CC----C
Confidence 34688999999888888889999999975554 122 221111 23456777653 344444322 11 3
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcE-EEEecCCcccccccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQL-LSIIRSPLFTAKEWYKNVFGL 207 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~-~~~~~~~~~~~~~~~~~~~~p 207 (335)
.|..||.++++....... . ....+.+++.|+|+.+++.+..+.|..+|..... ...+.... .....
T Consensus 221 ~v~~wd~~~~~~~~~~~~----h-~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~--------~~~~~ 287 (354)
T 2pbi_B 221 KAMVWDMRSGQCVQAFET----H-ESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKES--------IIFGA 287 (354)
T ss_dssp CEEEEETTTCCEEEEECC----C-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT--------CCSCE
T ss_pred eEEEEECCCCcEEEEecC----C-CCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC--------cccce
Confidence 599999998876533221 1 3456789999999999988889999999986543 33222110 11246
Q ss_pred CeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEE
Q 039428 208 NGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARL 277 (335)
Q Consensus 208 ~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v 277 (335)
..++++|+|.++++-..++.|..+|...++ ....+. + . -.....+++.++|.++++....+.+++
T Consensus 288 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~-~~~~l~--~-h-~~~v~~l~~spdg~~l~sgs~D~~v~v 352 (354)
T 2pbi_B 288 SSVDFSLSGRLLFAGYNDYTINVWDVLKGS-RVSILF--G-H-ENRVSTLRVSPDGTAFCSGSWDHTLRV 352 (354)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCS-EEEEEC--C-C-SSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred eEEEEeCCCCEEEEEECCCcEEEEECCCCc-eEEEEE--C-C-CCcEEEEEECCCCCEEEEEcCCCCEEe
Confidence 789999999777777788999999997663 444443 2 2 133678999999987777554455654
No 166
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.79 E-value=1.7e-06 Score=80.32 Aligned_cols=207 Identities=10% Similarity=0.032 Sum_probs=130.8
Q ss_pred eeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEE
Q 039428 52 ETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALA 131 (335)
Q Consensus 52 egia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~ 131 (335)
...++.++++++++...++.|..||...+. .. .. .... ......+++++ +++++++.... ..|.
T Consensus 101 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-----~~--~~--~~~h-~~~v~~~~~~~-~~~~l~s~s~d-----~~i~ 164 (420)
T 3vl1_A 101 AVDTAKLQMRRFILGTTEGDIKVLDSNFNL-----QR--EI--DQAH-VSEITKLKFFP-SGEALISSSQD-----MQLK 164 (420)
T ss_dssp EEEEECSSSCEEEEEETTSCEEEECTTSCE-----EE--EE--TTSS-SSCEEEEEECT-TSSEEEEEETT-----SEEE
T ss_pred EEEEEecCCCEEEEEECCCCEEEEeCCCcc-----ee--ee--cccc-cCccEEEEECC-CCCEEEEEeCC-----CeEE
Confidence 344778999988888888999999864332 11 12 1121 13578999998 45544432211 3699
Q ss_pred EEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC-cEEEEecCCcccccc-----------
Q 039428 132 AYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG-QLLSIIRSPLFTAKE----------- 199 (335)
Q Consensus 132 ~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~~~~~----------- 199 (335)
.||.++++....... . ......+++.++|+.+++.+..+.|..+|... +....+....-....
T Consensus 165 iwd~~~~~~~~~~~~----h-~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 239 (420)
T 3vl1_A 165 IWSVKDGSNPRTLIG----H-RATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTD 239 (420)
T ss_dssp EEETTTCCCCEEEEC----C-SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCC
T ss_pred EEeCCCCcCceEEcC----C-CCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCc
Confidence 999987765432221 1 34567899999999888888889999999764 444333211000000
Q ss_pred ---ccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEecCCCeE
Q 039428 200 ---WYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGNPYPSA 275 (335)
Q Consensus 200 ---~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~~~~~~ 275 (335)
..........++++|+|.++++-..++.|..+|+...+ ....+.. + . ......+++.+++. ++++....+.+
T Consensus 240 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~-~-~-~~~v~~~~~~~~~~~~l~~g~~dg~i 315 (420)
T 3vl1_A 240 RQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE-QTIQLPS-K-F-TCSCNSLTVDGNNANYIYAGYENGML 315 (420)
T ss_dssp SSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC-EEEEECC-T-T-SSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred ceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc-eeEEccc-c-c-CCCceeEEEeCCCCCEEEEEeCCCeE
Confidence 00011235677889999777777788899999998764 3333322 1 1 13367899999987 77775545778
Q ss_pred EEEEcCCC
Q 039428 276 RLVESSDG 283 (335)
Q Consensus 276 ~v~~~~~~ 283 (335)
++.+...+
T Consensus 316 ~vwd~~~~ 323 (420)
T 3vl1_A 316 AQWDLRSP 323 (420)
T ss_dssp EEEETTCT
T ss_pred EEEEcCCC
Confidence 88887654
No 167
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.78 E-value=2.5e-06 Score=80.79 Aligned_cols=234 Identities=9% Similarity=0.047 Sum_probs=142.5
Q ss_pred ceeeeEEcCCCCEEEEE-ecCCeEEEEECC--CCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCc
Q 039428 50 LCETAKWDDVGRRFLVS-FLDGGVGQVLVP--DEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNK 126 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~-~~~~~I~~~d~~--~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~ 126 (335)
...+++|+++|+.++++ ..++.|..||.. ++.. +. .+..... ...+..+++++++..|+++ +..
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~----~~---~~~~~~~-~~~v~~~~~sp~~~~l~~~--~~~--- 170 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV----LK---LRKRFCF-SKRPNAISIAEDDTTVIIA--DKF--- 170 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC----EE---EEEEEEC-SSCEEEEEECTTSSEEEEE--ETT---
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce----ee---eeecccC-CCCceEEEEcCCCCEEEEE--eCC---
Confidence 36789999999987444 678999999864 3431 22 2211111 1356899999844455553 222
Q ss_pred cceEEEEECCCCeEEE--EeecCCCccCCCCCCceeECCC---CcEEEEeCCCCeEEEEccC-CcEEEEecCCccccccc
Q 039428 127 YSALAAYDLSTWKRLF--LTQLSGKSEEKSTADDIAVDAE---GNAYVTDVVSSKIWKVGVE-GQLLSIIRSPLFTAKEW 200 (335)
Q Consensus 127 ~~~v~~~d~~~~~~~~--~~~~~~~~~~~~~p~~~~vd~~---G~lyV~d~~~~~I~~~d~~-g~~~~~~~~~~~~~~~~ 200 (335)
..|+.||..+++... ...+. +. ....+.++++|+ |+++++....+.|..+|.. ++....+ +..
T Consensus 171 -g~v~~~~~~~~~~~~~~~~~~~--~h-~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~----~~~--- 239 (450)
T 2vdu_B 171 -GDVYSIDINSIPEEKFTQEPIL--GH-VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW----LFG--- 239 (450)
T ss_dssp -SEEEEEETTSCCCSSCCCCCSE--EC-SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE----CCC---
T ss_pred -CcEEEEecCCcccccccceeee--cc-cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee----ecC---
Confidence 359999987654321 00111 11 345678999999 8888877778899999876 3333321 100
Q ss_pred cccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccC--C-------------------cCCCCCCeEEE
Q 039428 201 YKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRG--G-------------------SSLSLGDGLAL 259 (335)
Q Consensus 201 ~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g--~-------------------~~~~~pdGia~ 259 (335)
.......++++ ++.++++-..++.|..+|+..++ ....+.... . ..-....++++
T Consensus 240 --h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 240 --HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK-NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp --CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC-EEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred --CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc-EeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 11237899999 99766677788999999998874 455554210 0 00012457888
Q ss_pred cCCCcEEEE-ecCCCeEEEEEc--CCCcEEEEEeeeecCCCCCcceEEEEeCCeEEEE
Q 039428 260 LSPTKLVVA-GNPYPSARLVES--SDGWETASVVAKFNGPTHRVATAATVKDGRVYLS 314 (335)
Q Consensus 260 d~~g~l~va-~~~~~~~~v~~~--~~~~~~~~~~~~~~~p~~~~Pt~va~~~g~lyV~ 314 (335)
.+++.++++ ....+.+.+.+. ..++.. +....+..+ ..+.++++..+.+|++
T Consensus 316 ~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l-~~~~~~~~~--~~v~~~~~~~~~~~v~ 370 (450)
T 2vdu_B 316 SKNLPFVAFFVEATKCIIILEMSEKQKGDL-ALKQIITFP--YNVISLSAHNDEFQVT 370 (450)
T ss_dssp CSSSSEEEEEETTCSEEEEEEECSSSTTCE-EEEEEEECS--SCEEEEEEETTEEEEE
T ss_pred eCCCCEEEEEECCCCeEEEEEeccCCCCce-eeccEeccC--CceEEEEecCCcEEEE
Confidence 888865554 434578888887 333221 233334333 3467788876777774
No 168
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.77 E-value=7.7e-06 Score=76.02 Aligned_cols=206 Identities=10% Similarity=0.117 Sum_probs=128.9
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceE
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSAL 130 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v 130 (335)
..+++|+++|+.++++..++.|..||..+++ .+. .+.... .....+++++++..|+.+..| ..|
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~----~~~---~~~~h~---~~v~~~~~~p~~~~l~s~s~d------~~v 189 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRK----IVM---ILQGHE---QDIYSLDYFPSGDKLVSGSGD------RTV 189 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTE----EEE---EECCCS---SCEEEEEECTTSSEEEEEETT------SEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCc----EEE---EEccCC---CCEEEEEEcCCCCEEEEecCC------CcE
Confidence 5689999999988888889999999965443 111 222111 246789999844444443222 369
Q ss_pred EEEECCCCeEEEEeecCCCccCCCCCCceeECC-CCcEEEEeCCCCeEEEEccCCc-EEEEecCCccccccccccccccC
Q 039428 131 AAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~~~~~~~~~p~ 208 (335)
..||.++++....... ......+++.+ +|+++++.+..+.|..+|.... ....+...... .........
T Consensus 190 ~iwd~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~---~~~h~~~v~ 260 (393)
T 1erj_A 190 RIWDLRTGQCSLTLSI------EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENES---GTGHKDSVY 260 (393)
T ss_dssp EEEETTTTEEEEEEEC------SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC---------CCCSSCEE
T ss_pred EEEECCCCeeEEEEEc------CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccC---CCCCCCCEE
Confidence 9999998876644332 23456788988 7888888888899999998643 33322111000 001122367
Q ss_pred eEEEccCCeEEEEECCCCEEEEEeCCCCcee---------EEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEE
Q 039428 209 GIVYHPDGFLIVIHMCSGNLFKIDIRKEEEE---------VKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVE 279 (335)
Q Consensus 209 Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~---------~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~ 279 (335)
.++++|+|.++++-..++.|..+|+...... .......+ . -.....+++.+++.++++....+.+++.+
T Consensus 261 ~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~-h-~~~v~~~~~~~~~~~l~sgs~D~~v~iwd 338 (393)
T 1erj_A 261 SVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG-H-KDFVLSVATTQNDEYILSGSKDRGVLFWD 338 (393)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEEC-C-SSCEEEEEECGGGCEEEEEETTSEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEec-c-cCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 8999999977777778899999988753100 00111112 1 12345788888888777755556788887
Q ss_pred cCCC
Q 039428 280 SSDG 283 (335)
Q Consensus 280 ~~~~ 283 (335)
...+
T Consensus 339 ~~~~ 342 (393)
T 1erj_A 339 KKSG 342 (393)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 6554
No 169
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.77 E-value=4.3e-06 Score=77.61 Aligned_cols=206 Identities=17% Similarity=0.098 Sum_probs=131.2
Q ss_pred CcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 48 SFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
.....+++|+++++.+++...++.|..||..+++. +. .+.... .....++++++...|+.+..|
T Consensus 139 ~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~----~~---~~~~h~---~~v~~~~~~~~~~~l~s~~~d------ 202 (420)
T 3vl1_A 139 VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN----PR---TLIGHR---ATVTDIAIIDRGRNVLSASLD------ 202 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC----CE---EEECCS---SCEEEEEEETTTTEEEEEETT------
T ss_pred cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC----ce---EEcCCC---CcEEEEEEcCCCCEEEEEcCC------
Confidence 34567899999999888888899999999755542 12 222111 256789999844444443222
Q ss_pred ceEEEEECCCCeEEEEeecCCCc-c------------------CCCCCCceeECCCCcEEEEeCCCCeEEEEccCCc-EE
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKS-E------------------EKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ-LL 187 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~-~------------------~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~-~~ 187 (335)
..|..||.++++........... . .....+.++++++|+..++....+.|..+|.... ..
T Consensus 203 ~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 282 (420)
T 3vl1_A 203 GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQT 282 (420)
T ss_dssp SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEE
T ss_pred CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 35999999988766443321000 0 0244567888999988888888899999998643 33
Q ss_pred EEecCCccccccccccccccCeEEEccCCe-EEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEE
Q 039428 188 SIIRSPLFTAKEWYKNVFGLNGIVYHPDGF-LIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLV 266 (335)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~-Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~ 266 (335)
..+... .......++++|++. ++++-..++.|..+|+...+.....+..... .....+.. +++.++
T Consensus 283 ~~~~~~---------~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~---~~v~~~~~-~~~~~l 349 (420)
T 3vl1_A 283 IQLPSK---------FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEG---TPINNVYF-AAGALF 349 (420)
T ss_dssp EEECCT---------TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTT---SCEEEEEE-ETTEEE
T ss_pred EEcccc---------cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCC---CCceEEEe-CCCCEE
Confidence 222110 112378999999995 8888888899999999875312344442111 12344544 467777
Q ss_pred EEecCCCeEEEEEcCC
Q 039428 267 VAGNPYPSARLVESSD 282 (335)
Q Consensus 267 va~~~~~~~~v~~~~~ 282 (335)
++....+.+++.+...
T Consensus 350 ~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 350 VSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEETTTEEEEEEEECC
T ss_pred EEecCCccEEEEeccC
Confidence 7755446677777543
No 170
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.77 E-value=1.2e-05 Score=73.06 Aligned_cols=206 Identities=11% Similarity=0.100 Sum_probs=128.2
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCC-CCeEEEEEecCCCCccc
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRP-RNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~-~g~l~v~~~D~~~~~~~ 128 (335)
...+++|+++++.++++..++.|..|+..... ......+.... .....+++.++ +++++++.. .. .
T Consensus 13 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~~~h~---~~v~~~~~~~~~~~~~l~s~~-~d----g 79 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-----HKLIDTLTGHE---GPVWRVDWAHPKFGTILASCS-YD----G 79 (379)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTE-----EEEEEEECCCS---SCEEEEEECCGGGCSEEEEEE-TT----S
T ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEecCCCc-----ceeeeEecCCC---CcEEEEEeCCCCCCCEEEEec-cC----C
Confidence 45789999999988887788999999853222 11101121111 34678888753 144444322 21 3
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCC--CcEEEEeCCCCeEEEEccCCcE---EEEecCCcccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE--GNAYVTDVVSSKIWKVGVEGQL---LSIIRSPLFTAKEWYKN 203 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~--G~lyV~d~~~~~I~~~d~~g~~---~~~~~~~~~~~~~~~~~ 203 (335)
.|..||.++++.......... ......+++.++ |+++++.+..+.|..+|..... ...+.. .
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~----------~ 146 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVH---SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA----------H 146 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCC---SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC----------C
T ss_pred EEEEEEcCCCceeEeeeecCC---CcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecC----------C
Confidence 599999988864322222111 345778999999 8888888888999999976431 111110 1
Q ss_pred ccccCeEEEcc-------------CCeEEEEECCCCEEEEEeCCCCceeEEEE-eccCCcCCCCCCeEEEcCC---CcEE
Q 039428 204 VFGLNGIVYHP-------------DGFLIVIHMCSGNLFKIDIRKEEEEVKLI-ELRGGSSLSLGDGLALLSP---TKLV 266 (335)
Q Consensus 204 ~~~p~Gia~~~-------------dg~Lyvad~~~~~v~~~d~~~~~~~~~~~-~~~g~~~~~~pdGia~d~~---g~l~ 266 (335)
......++++| ++.++++-..++.|..+|+...+...... ...+ . -.....+++.++ +.++
T Consensus 147 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-h-~~~v~~~~~sp~~~~~~~l 224 (379)
T 3jrp_A 147 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-H-SDWVRDVAWSPTVLLRSYL 224 (379)
T ss_dssp TTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC-C-SSCEEEEEECCCCSSSEEE
T ss_pred CCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec-c-cCcEeEEEECCCCCCCCeE
Confidence 12367889998 67777777778889888887653122222 1222 1 133678999999 7777
Q ss_pred EEecCCCeEEEEEcCCC
Q 039428 267 VAGNPYPSARLVESSDG 283 (335)
Q Consensus 267 va~~~~~~~~v~~~~~~ 283 (335)
++....+.+++.+...+
T Consensus 225 ~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 225 ASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEEETTSCEEEEEESST
T ss_pred EEEeCCCEEEEEeCCCC
Confidence 77554567888876543
No 171
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.76 E-value=3.4e-06 Score=85.59 Aligned_cols=241 Identities=15% Similarity=0.126 Sum_probs=135.6
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeec----CCcCCCCcceEEEeCCCCeEEEEEecCCCCc
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKE----DDVVGNATMGIAVDRPRNRLLVAFTDVLGNK 126 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~----~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~ 126 (335)
..++..|++|++|+.+ .+.++++++.++.. ....+... ..+..+....|..|. +|+||+++ +
T Consensus 326 v~~i~~D~~g~lWiGt--~~Gl~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lWigt-~----- 391 (758)
T 3ott_A 326 FYSLFRDSKGFYWFGG--ANGLIRFTDPAGER-----HDAIWYRMGDKTYPLSHNRIRHIYEDK-EQQLWIAT-D----- 391 (758)
T ss_dssp EEEEEECTTCCEEEEE--TTEEEEESCTTSSC-----CCCEEECTTCSSSCCSCSCEEEEEECT-TSCEEEEE-T-----
T ss_pred EEEEEEcCCCCEEEee--CCcceeeccccccc-----ceeEEeccCCcCCCCCCCceEEEEECC-CCCEEEEe-C-----
Confidence 3567789999988776 35799997543321 00012211 112224567888885 89999964 2
Q ss_pred cceEEEEECCCCeEEEEeecCCCcc-CCCCCCceeECCCCcEEEEeCCCCeEEEEccCC------cEEEEecCCcccccc
Q 039428 127 YSALAAYDLSTWKRLFLTQLSGKSE-EKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG------QLLSIIRSPLFTAKE 199 (335)
Q Consensus 127 ~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g------~~~~~~~~~~~~~~~ 199 (335)
..|.+||+++++............ .......+..|++|++||+. ..+.|++++++. +... ....+....
T Consensus 392 -~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT-~~~Gl~~~~~~~~~~~~~~~~~--~~~~~~~~~ 467 (758)
T 3ott_A 392 -GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIST-CLGGIFVVDKHKLMQSTSGQYI--AEQNYSVHN 467 (758)
T ss_dssp -TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEE-SSSCEEEEEHHHHHHCCSSEEE--CSEEECGGG
T ss_pred -CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEE-CCCceEEEccccccccCCccee--ccccccccc
Confidence 249999999887653221111100 12345678889999999974 345799998753 1110 000111100
Q ss_pred ccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEE
Q 039428 200 WYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVE 279 (335)
Q Consensus 200 ~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~ 279 (335)
.. .......|..+++|+||+.....+-|+++|++.. ....+...+......+..+..|.+|++|++.. +++..++
T Consensus 468 ~l-~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~--~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~--~Gl~~~~ 542 (758)
T 3ott_A 468 GL-SGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTR--EVTKLFADELTGEKSPNYLLCDEDGLLWVGFH--GGVMRIN 542 (758)
T ss_dssp TC-SCSCEEEEEECTTSCEEEEETTCSSEEEEETTTT--EEEEECTTTSCGGGCEEEEEECTTSCEEEEET--TEEEEEC
T ss_pred cc-ccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCC--ceEEecCCCcCCCcccceEEECCCCCEEEEec--CceEEEe
Confidence 00 0113667899999999983323345999999876 55555321100012467899999999999976 5676665
Q ss_pred cCCC-cEEEEEeeeecCCCCCcceEEEEeCCeEEEEeccC
Q 039428 280 SSDG-WETASVVAKFNGPTHRVATAATVKDGRVYLSHLLG 318 (335)
Q Consensus 280 ~~~~-~~~~~~~~~~~~p~~~~Pt~va~~~g~lyV~~~~~ 318 (335)
...+ .+.-. ...+ | .....++..+.|+||++...|
T Consensus 543 ~~~~~~~~~~-~~gl--~-~~~i~~i~~~~g~lWi~t~~G 578 (758)
T 3ott_A 543 PKDESQQSIS-FGSF--S-NNEILSMTCVKNSIWVSTTNG 578 (758)
T ss_dssp C--CCCCBCC-CCC------CCEEEEEEETTEEEEEESSC
T ss_pred cCCCceEEec-ccCC--C-ccceEEEEECCCCEEEECCCC
Confidence 4332 11000 0111 1 223445555688999866443
No 172
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.76 E-value=2.6e-05 Score=72.05 Aligned_cols=214 Identities=11% Similarity=0.115 Sum_probs=129.5
Q ss_pred EcCCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEE----
Q 039428 44 YHSPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAF---- 119 (335)
Q Consensus 44 ~~~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~---- 119 (335)
+.+-...-.+++|+|+++.++.+..+++|..||..+++. .. .+.... .....+++++ ++.+.++.
T Consensus 62 l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~----~~---~~~~h~---~~v~~~~~s~-~g~~las~~~d~ 130 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQK----TH---AIKLHC---PWVMECAFAP-NGQSVACGGLDS 130 (380)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE----EE---EEECCC---TTCCCCEECT-TSSEEEECCSSS
T ss_pred ccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc----ce---EEecCC---CCEEEEEECC-CCCEEEEeeCCC
Confidence 444444568999999999888888899999999654431 11 111110 1223344443 22222210
Q ss_pred ---------------------------------------------ecCCCCccceEEEEECCCCeEEEEeecCCCccCCC
Q 039428 120 ---------------------------------------------TDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKS 154 (335)
Q Consensus 120 ---------------------------------------------~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 154 (335)
+.. + ..|..||.++++.........+.....
T Consensus 131 ~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~--D--~~i~~wd~~~~~~~~~~~~~~~~~h~~ 206 (380)
T 3iz6_a 131 ACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSG--D--QTCVLWDVTTGQRISIFGSEFPSGHTA 206 (380)
T ss_dssp CCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECT--T--SCEEEECTTTCCEEEEECCCSSSSCCS
T ss_pred cEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECC--C--CcEEEEEcCCCcEEEEeecccCCCCcc
Confidence 110 1 347777877766543221111111123
Q ss_pred CCCceeECC-CCcEEEEeCCCCeEEEEccC--CcEEEEecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEE
Q 039428 155 TADDIAVDA-EGNAYVTDVVSSKIWKVGVE--GQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKI 231 (335)
Q Consensus 155 ~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~--g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~ 231 (335)
....+++.+ +++++++.+..+.|..+|.. ++....+.. .....+.++++|+|..+++-+.++.|..+
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~----------h~~~v~~v~~~p~~~~l~s~s~D~~i~lw 276 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG----------HEGDINSVKFFPDGQRFGTGSDDGTCRLF 276 (380)
T ss_dssp CEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC----------CSSCCCEEEECTTSSEEEEECSSSCEEEE
T ss_pred CeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC----------cCCCeEEEEEecCCCeEEEEcCCCeEEEE
Confidence 345677766 68899998889999999975 222222211 11237899999999888888899999999
Q ss_pred eCCCCceeEEEEeccCC---cCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 232 DIRKEEEEVKLIELRGG---SSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 232 d~~~~~~~~~~~~~~g~---~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
|+..++ ....+..... ........+++.++|.++++....+.+++.+...+
T Consensus 277 d~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 277 DMRTGH-QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA 330 (380)
T ss_dssp ETTTTE-EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC
T ss_pred ECCCCc-EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC
Confidence 998874 4444432211 11223578999999998888665577888886544
No 173
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.75 E-value=3.4e-05 Score=69.43 Aligned_cols=208 Identities=10% Similarity=-0.022 Sum_probs=132.3
Q ss_pred cCCCcceeeeEEcCCC-CEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCC
Q 039428 45 HSPSFLCETAKWDDVG-RRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVL 123 (335)
Q Consensus 45 ~~~~~~pegia~d~~g-~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~ 123 (335)
.+-.-...++++++++ ++++.+..+++|..|+...... .... ......+.. .....+++.+ ++++.++....
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~---~~~~-~~~~~~~h~-~~v~~~~~s~-dg~~l~s~s~D- 86 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ---KFGV-PVRSFKGHS-HIVQDCTLTA-DGAYALSASWD- 86 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT---EEEE-EEEEEECCS-SCEEEEEECT-TSSEEEEEETT-
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc---cccc-cceEEeCCc-ccEEEEEECC-CCCEEEEEeCC-
Confidence 3334446789999875 6666668899999987432110 0110 111111111 3467889997 55555432211
Q ss_pred CCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCcccccccccc
Q 039428 124 GNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKN 203 (335)
Q Consensus 124 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~ 203 (335)
..|..||.++++....... . ....+.++++++++++++.+..+.|..+|.+++....+...
T Consensus 87 ----~~v~~wd~~~~~~~~~~~~----h-~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h---------- 147 (319)
T 3frx_A 87 ----KTLRLWDVATGETYQRFVG----H-KSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGH---------- 147 (319)
T ss_dssp ----SEEEEEETTTTEEEEEEEC----C-SSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCC----------
T ss_pred ----CEEEEEECCCCCeeEEEcc----C-CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEecc----------
Confidence 3699999999876633321 1 34567899999999999988899999999987765433210
Q ss_pred ccccCeEEEcc------CCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEE
Q 039428 204 VFGLNGIVYHP------DGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARL 277 (335)
Q Consensus 204 ~~~p~Gia~~~------dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v 277 (335)
......+++.| ++.++++-..++.|..+|+...+ ....+. + . -.....+++.++|+++++....+.+++
T Consensus 148 ~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~--~-h-~~~v~~~~~sp~g~~l~s~~~dg~i~i 222 (319)
T 3frx_A 148 NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ-IEADFI--G-H-NSNINTLTASPDGTLIASAGKDGEIML 222 (319)
T ss_dssp SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE-EEEEEC--C-C-CSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch-hheeec--C-C-CCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 11245667766 34467777788899999998763 223332 2 1 133578999999998888665577888
Q ss_pred EEcCCC
Q 039428 278 VESSDG 283 (335)
Q Consensus 278 ~~~~~~ 283 (335)
.+...+
T Consensus 223 wd~~~~ 228 (319)
T 3frx_A 223 WNLAAK 228 (319)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 887654
No 174
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.74 E-value=3.8e-06 Score=73.28 Aligned_cols=185 Identities=12% Similarity=0.093 Sum_probs=111.0
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCC-CCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPD-EYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~-g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
....+++|+|+|+.++++. ++.|+.+|..+ ++. . .+.... .......+++++++..|+++..+..+.
T Consensus 42 ~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~-----~--~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~-- 109 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP-----E--KVDTGF--ATICNNDHGISPDGALYAISDKVEFGK-- 109 (297)
T ss_dssp SCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC-----E--ECCCTT--CCCBCSCCEECTTSSEEEEEECTTTSS--
T ss_pred cceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc-----e--Eecccc--ccccccceEECCCCCEEEEEEeCCCCc--
Confidence 3467999999999777764 78999999654 331 1 122111 113457899998444454432111111
Q ss_pred ceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCC--eEEEEccCCcEEEEecCCccccccccccc
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSS--KIWKVGVEGQLLSIIRSPLFTAKEWYKNV 204 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~--~I~~~d~~g~~~~~~~~~~~~~~~~~~~~ 204 (335)
..|+.+|..+++... +.. ....+.+++.|+|+ ++++....+ .||.++.++.....+.. ..
T Consensus 110 ~~l~~~~~~~~~~~~---~~~----~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~----------~~ 172 (297)
T 2ojh_A 110 SAIYLLPSTGGTPRL---MTK----NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTH----------GE 172 (297)
T ss_dssp CEEEEEETTCCCCEE---CCS----SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCC----------SS
T ss_pred ceEEEEECCCCceEE---eec----CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEccc----------CC
Confidence 569999988765432 211 12356789999996 554544444 67788776554432211 11
Q ss_pred cccCeEEEccCC-eEEEEEC--CCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEE
Q 039428 205 FGLNGIVYHPDG-FLIVIHM--CSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVA 268 (335)
Q Consensus 205 ~~p~Gia~~~dg-~Lyvad~--~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va 268 (335)
.....++++|+| .|+++.. ...+|+.++..+. ....+.... .....+++.++|+.++.
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~----~~~~~~~~s~dg~~l~~ 233 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS--SVERITDSA----YGDWFPHPSPSGDKVVF 233 (297)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS--CEEECCCCS----EEEEEEEECTTSSEEEE
T ss_pred CccccceECCCCCEEEEEecCCCCccEEEECCCCC--CcEEEecCC----cccCCeEECCCCCEEEE
Confidence 236789999999 5776653 4568888887765 444433211 22456889999864333
No 175
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.73 E-value=3.8e-05 Score=70.77 Aligned_cols=186 Identities=17% Similarity=0.164 Sum_probs=107.7
Q ss_pred cceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEc-
Q 039428 103 TMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVG- 181 (335)
Q Consensus 103 p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d- 181 (335)
...++++|++..+.+++++. + ..|..||+++++....... ....+++++.|||++.++.+.. .+.+++
T Consensus 136 ~~~v~fSpDg~~la~as~~~--d--~~i~iwd~~~~~~~~~~~~------~~~V~~v~fspdg~~l~s~s~~-~~~~~~~ 204 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKV--P--AIMRIIDPSDLTEKFEIET------RGEVKDLHFSTDGKVVAYITGS-SLEVIST 204 (365)
T ss_dssp EEEEEECTTSSCEEEEESCS--S--CEEEEEETTTTEEEEEEEC------SSCCCEEEECTTSSEEEEECSS-CEEEEET
T ss_pred EEEEEEcCCCCEEEEEECCC--C--CEEEEeECCCCcEEEEeCC------CCceEEEEEccCCceEEeccce-eEEEEEe
Confidence 56799998444455543322 2 4699999999887754332 2457899999999988876654 455555
Q ss_pred cCCcEEEEecCCccccccccccccccCeEEEccCCeEEE-EECCCC---EEEEEeCCCCce-eEEEEeccCCcCCCCCCe
Q 039428 182 VEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIV-IHMCSG---NLFKIDIRKEEE-EVKLIELRGGSSLSLGDG 256 (335)
Q Consensus 182 ~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyv-ad~~~~---~v~~~d~~~~~~-~~~~~~~~g~~~~~~pdG 256 (335)
..++..... .... .......++++|||..++ +....+ .++.++...... ..+...+.+ . ......
T Consensus 205 ~~~~~~~~~---~~~~-----~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~-~~~V~~ 274 (365)
T 4h5i_A 205 VTGSCIARK---TDFD-----KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN-R-FKGITS 274 (365)
T ss_dssp TTCCEEEEE---CCCC-----TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES-S-CSCEEE
T ss_pred ccCcceeee---ecCC-----CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC-C-CCCeEe
Confidence 445443311 0100 112367899999995444 433322 566667665421 111122222 1 133567
Q ss_pred EEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeee-cCCCCCcceEEEEe-CCeEEEE
Q 039428 257 LALLSPTKLVVAGNPYPSARLVESSDGWETASVVAKF-NGPTHRVATAATVK-DGRVYLS 314 (335)
Q Consensus 257 ia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~-~~p~~~~Pt~va~~-~g~lyV~ 314 (335)
+++.|+|+++++....+.+++.+...+ +.+..+ .+. ....++++|. +|++.++
T Consensus 275 ~~~Spdg~~lasgs~D~~V~iwd~~~~----~~~~~~~~gH-~~~V~~v~fSpdg~~laS 329 (365)
T 4h5i_A 275 MDVDMKGELAVLASNDNSIALVKLKDL----SMSKIFKQAH-SFAITEVTISPDSTYVAS 329 (365)
T ss_dssp EEECTTSCEEEEEETTSCEEEEETTTT----EEEEEETTSS-SSCEEEEEECTTSCEEEE
T ss_pred EEECCCCCceEEEcCCCEEEEEECCCC----cEEEEecCcc-cCCEEEEEECCCCCEEEE
Confidence 899999998877655577999887654 233332 111 1224677774 5555553
No 176
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.73 E-value=1.9e-06 Score=78.81 Aligned_cols=169 Identities=15% Similarity=0.203 Sum_probs=100.1
Q ss_pred ceeeeEEcCCCC-------EEEEE-ec--CCeEEEE--ECCCCCCCcceeeeeEEeec---CCcCC-CCcceEEE--eCC
Q 039428 50 LCETAKWDDVGR-------RFLVS-FL--DGGVGQV--LVPDEYSPGTVLEEVKLVKE---DDVVG-NATMGIAV--DRP 111 (335)
Q Consensus 50 ~pegia~d~~g~-------~~~~~-~~--~~~I~~~--d~~~g~~~~~v~~~~~~~~~---~~~~~-~~p~Gi~~--d~~ 111 (335)
.++++.+.++=. +.+++ .. +++|..| |+..+. +. -+.. |-... ..|.|+++ ++.
T Consensus 69 ~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-----l~---~i~~~~~pv~t~~~~pyGlcly~~~~ 140 (355)
T 3amr_A 69 KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-----LQ---SMTDPDHPIATAINEVYGFTLYHSQK 140 (355)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-----EE---ECSCTTSCEECCCSSCCCEEEEECTT
T ss_pred CcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-----ee---eccccccCcCCCCCCeeEEEEEecCC
Confidence 467777766321 45666 55 5776555 643232 22 1211 10011 57899999 765
Q ss_pred CCeEEEEEecCCCCccceEEEEEC---CCC----eEEEEeecCCCccCCCCCCceeECCC-CcEEEEeCCCCeEEEEccC
Q 039428 112 RNRLLVAFTDVLGNKYSALAAYDL---STW----KRLFLTQLSGKSEEKSTADDIAVDAE-GNAYVTDVVSSKIWKVGVE 183 (335)
Q Consensus 112 ~g~l~v~~~D~~~~~~~~v~~~d~---~~~----~~~~~~~~~~~~~~~~~p~~~~vd~~-G~lyV~d~~~~~I~~~d~~ 183 (335)
.+.+|+...+.. +.+..|++ ..+ +++....+ ...|.++++|+. |.+||++...+ ||+++++
T Consensus 141 ~g~~yafV~~k~----G~~~q~~l~~~~~g~~~~~lVR~f~l------gsq~EgcvvDd~~g~Lyv~eEd~G-Iw~~da~ 209 (355)
T 3amr_A 141 TGKYYAMVTGKE----GEFEQYELKADKNGYISGKKVRAFKM------NSQTEGMAADDEYGRLYIAEEDEA-IWKFSAE 209 (355)
T ss_dssp TCCEEEEEECSS----SEEEEEEEEECTTSCEEEEEEEEEEC------SSCEEEEEEETTTTEEEEEETTTE-EEEEECS
T ss_pred CCcEEEEEECCC----CeEEEEEEEeCCCCcccceEEEEecC------CCCcceEEEcCCCCeEEEecccce-EEEEeCC
Confidence 676555445443 23555544 333 22333333 246789999985 89999999855 9999954
Q ss_pred --C----cEEEEecCCccccccccccccccCeEEEcc--C--CeEEEEECCCCEEEEEeCCCCceeEEEEec
Q 039428 184 --G----QLLSIIRSPLFTAKEWYKNVFGLNGIVYHP--D--GFLIVIHMCSGNLFKIDIRKEEEEVKLIEL 245 (335)
Q Consensus 184 --g----~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~--d--g~Lyvad~~~~~v~~~d~~~~~~~~~~~~~ 245 (335)
+ +.+..++.+.+. ..+.||++.+ + |+|++++.+++++.+||.......+..|.+
T Consensus 210 p~~~~~~~~v~~~~~g~l~--------aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~I 273 (355)
T 3amr_A 210 PDGGSNGTVIDRADGRHLT--------RDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRI 273 (355)
T ss_dssp TTSCSCCEEEEEBSSSSBC--------SCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEEE
T ss_pred cCCCCCceEEEEecCCccc--------cCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEEe
Confidence 3 222222222222 2489999953 3 479999999999999999743115556654
No 177
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.72 E-value=2.9e-06 Score=78.82 Aligned_cols=207 Identities=12% Similarity=0.073 Sum_probs=131.6
Q ss_pred CCcceeeeEEcCCC-CEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCC
Q 039428 47 PSFLCETAKWDDVG-RRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGN 125 (335)
Q Consensus 47 ~~~~pegia~d~~g-~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~ 125 (335)
......+++|++++ ++++++..++.|..||..+++ .+. .+.... .......+++++++..|+++..|
T Consensus 130 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~----~~~---~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d---- 197 (402)
T 2aq5_A 130 HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA----AVL---TLGPDV-HPDTIYSVDWSRDGALICTSCRD---- 197 (402)
T ss_dssp CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE----EEE---EECTTT-CCSCEEEEEECTTSSCEEEEETT----
T ss_pred CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC----ccE---EEecCC-CCCceEEEEECCCCCEEEEEecC----
Confidence 33456789999998 577776888999999965443 111 221011 11356899999843444443222
Q ss_pred ccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEe---CCCCeEEEEccCCcE--EEEecCCccccccc
Q 039428 126 KYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTD---VVSSKIWKVGVEGQL--LSIIRSPLFTAKEW 200 (335)
Q Consensus 126 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d---~~~~~I~~~d~~g~~--~~~~~~~~~~~~~~ 200 (335)
+.|..||+++++....... . .....+..+++.++|+++++. +..+.|..+|..... ..... +
T Consensus 198 --~~i~iwd~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~---~----- 264 (402)
T 2aq5_A 198 --KRVRVIEPRKGTVVAEKDR-P--HEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQE---L----- 264 (402)
T ss_dssp --SEEEEEETTTTEEEEEEEC-S--SCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEE---C-----
T ss_pred --CcEEEEeCCCCceeeeecc-C--CCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEe---c-----
Confidence 3699999998877644311 1 112346789999999988877 678899999986421 11110 0
Q ss_pred cccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEE
Q 039428 201 YKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVE 279 (335)
Q Consensus 201 ~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~ 279 (335)
........++++|++ .|+++...++.|..++...++.....+.... . -....++++.+++.+.++.. ..+++.+
T Consensus 265 -~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~-~-~~~v~~~~~sp~~~~~~s~~--~~~~~~~ 339 (402)
T 2aq5_A 265 -DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS-S-KESQRGMGYMPKRGLEVNKC--EIARFYK 339 (402)
T ss_dssp -CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC-C-SSCCSEEEECCGGGSCGGGT--EEEEEEE
T ss_pred -cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc-c-CCcccceEEecccccceecc--eeEEEEE
Confidence 012347789999999 7778888889999999887631144443211 1 13478999999988766544 4566666
Q ss_pred cCCC
Q 039428 280 SSDG 283 (335)
Q Consensus 280 ~~~~ 283 (335)
...+
T Consensus 340 l~~~ 343 (402)
T 2aq5_A 340 LHER 343 (402)
T ss_dssp EETT
T ss_pred cCCC
Confidence 5443
No 178
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.71 E-value=2.8e-07 Score=84.55 Aligned_cols=205 Identities=9% Similarity=0.006 Sum_probs=117.7
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceE
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSAL 130 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v 130 (335)
..+++|+++|+++++...++.|..||..++.. .. .....+. ......+++++++..|..+..| ..|
T Consensus 14 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~-----~~--~~~~~~h-~~~v~~~~~s~~~~~l~s~s~d------~~v 79 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGNGW-----KH--ARTFSDH-DKIVTCVDWAPKSNRIVTCSQD------RNA 79 (377)
T ss_dssp CSCCEECSSSSEEECCCSSSCBCEEEEETTEE-----EE--CCCBCCC-SSCEEEEEECTTTCCEEEEETT------SSE
T ss_pred EEEEEECCCCCEEEEecCCCEEEEEEccCCce-----EE--EEEEecC-CceEEEEEEeCCCCEEEEEeCC------CeE
Confidence 46899999999877777788888887543310 10 1111111 1356889999843444443222 359
Q ss_pred EEEECCCCe-EEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcE----EEEecCCcccccccccccc
Q 039428 131 AAYDLSTWK-RLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQL----LSIIRSPLFTAKEWYKNVF 205 (335)
Q Consensus 131 ~~~d~~~~~-~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~----~~~~~~~~~~~~~~~~~~~ 205 (335)
..||.++++ ......+.. . ......+++.++|+.+++.+..+.|..+|.+... ...+..+ ...
T Consensus 80 ~vwd~~~~~~~~~~~~~~~--~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---------h~~ 147 (377)
T 3dwl_C 80 YVYEKRPDGTWKQTLVLLR--L-NRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRP---------LRS 147 (377)
T ss_dssp EEC------CCCCEEECCC--C-SSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSS---------CCS
T ss_pred EEEEcCCCCceeeeeEecc--c-CCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecc---------cCC
Confidence 999988765 111111211 1 3456789999999877777778899999887543 2222110 123
Q ss_pred ccCeEEEccCCeEEEEECCCCEEEEEeCCCCc--------------eeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecC
Q 039428 206 GLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEE--------------EEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNP 271 (335)
Q Consensus 206 ~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~--------------~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~ 271 (335)
..+.++++|++.++++-..++.|..+|+...+ ...+.+...+ . -.....+++.++|+++++...
T Consensus 148 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~sp~~~~l~~~~~ 225 (377)
T 3dwl_C 148 TILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYP-S-GGWVHAVGFSPSGNALAYAGH 225 (377)
T ss_dssp CEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCC-C-SSSEEEEEECTTSSCEEEEET
T ss_pred CeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhccc-C-CceEEEEEECCCCCEEEEEeC
Confidence 47899999999777776777888888875220 0111221112 1 133678999999986666554
Q ss_pred CCeEEEEEcCCC
Q 039428 272 YPSARLVESSDG 283 (335)
Q Consensus 272 ~~~~~v~~~~~~ 283 (335)
.+.+++.+...+
T Consensus 226 d~~i~iwd~~~~ 237 (377)
T 3dwl_C 226 DSSVTIAYPSAP 237 (377)
T ss_dssp TTEEC-CEECST
T ss_pred CCcEEEEECCCC
Confidence 467887776554
No 179
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.70 E-value=3.8e-06 Score=77.68 Aligned_cols=214 Identities=9% Similarity=0.038 Sum_probs=134.4
Q ss_pred ceeeeEEcCC-CCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 50 LCETAKWDDV-GRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 50 ~pegia~d~~-g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
...+++|+++ ++++++...++.|..||...+................. .......++++++++.++++.. .. .
T Consensus 115 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~-~d----g 188 (416)
T 2pm9_A 115 SVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMS-SVDEVISLAWNQSLAHVFASAG-SS----N 188 (416)
T ss_dssp CCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCC-SSCCCCEEEECSSCTTEEEEES-SS----S
T ss_pred ceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccC-CCCCeeEEEeCCCCCcEEEEEc-CC----C
Confidence 4578999998 77777778889999998654430000000000100011 1135689999985366666432 21 3
Q ss_pred eEEEEECCCCeEEEEeecCCCccC-CCCCCceeECCCC-cEEEEeCCCC---eEEEEccCCc--EEEEecCCcccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEE-KSTADDIAVDAEG-NAYVTDVVSS---KIWKVGVEGQ--LLSIIRSPLFTAKEWY 201 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~-~~~p~~~~vd~~G-~lyV~d~~~~---~I~~~d~~g~--~~~~~~~~~~~~~~~~ 201 (335)
.|..||.++++............+ ....+.++++|+| +++++....+ .|..+|.... ... .+..
T Consensus 189 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~-----~~~~---- 259 (416)
T 2pm9_A 189 FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQ-----TLNQ---- 259 (416)
T ss_dssp CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSB-----CCCS----
T ss_pred CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcE-----Eeec----
Confidence 599999998877644433211000 2456789999997 5777766666 8888987642 211 1110
Q ss_pred ccccccCeEEEcc-CCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCC-cEEEEecCCCeEEEEE
Q 039428 202 KNVFGLNGIVYHP-DGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPT-KLVVAGNPYPSARLVE 279 (335)
Q Consensus 202 ~~~~~p~Gia~~~-dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g-~l~va~~~~~~~~v~~ 279 (335)
........++++| ++.++++-..+++|..+|+...+ ....+.... .....+++.+++ .++++....+.+++.+
T Consensus 260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~-~~~~~~~~~----~~v~~~~~s~~~~~~l~s~~~d~~i~iw~ 334 (416)
T 2pm9_A 260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE-QLSQFPARG----NWCFKTKFAPEAPDLFACASFDNKIEVQT 334 (416)
T ss_dssp CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC-EEEEEECSS----SCCCCEEECTTCTTEEEECCSSSEEEEEE
T ss_pred CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc-cceeecCCC----CceEEEEECCCCCCEEEEEecCCcEEEEE
Confidence 0123478999999 78777777788999999998764 445554322 336789999998 7888765557788887
Q ss_pred cCCC
Q 039428 280 SSDG 283 (335)
Q Consensus 280 ~~~~ 283 (335)
....
T Consensus 335 ~~~~ 338 (416)
T 2pm9_A 335 LQNL 338 (416)
T ss_dssp SCCC
T ss_pred ccCC
Confidence 6543
No 180
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.68 E-value=3.4e-05 Score=68.87 Aligned_cols=199 Identities=11% Similarity=0.064 Sum_probs=129.2
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
....+++.++++.++++..++.|..||..+++. +. .+ .... .....++++| ++.++++..+. ..
T Consensus 57 ~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~----~~--~~-~~h~---~~v~~~~~~~-~~~~l~sgs~D-----~~ 120 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK----VV--DF-EAHP---DYIRSIAVHP-TKPYVLSGSDD-----LT 120 (304)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE----EE--EE-ECCS---SCEEEEEECS-SSSEEEEEETT-----SC
T ss_pred cEEEEEEeCCCCEEEEECCCCEEEEEECCCCcE----EE--EE-eCCC---CcEEEEEEcC-CCCEEEEECCC-----Ce
Confidence 346789999999888888899999999755541 11 12 1111 2567999998 55554432221 35
Q ss_pred EEEEECCCCe-EEEEeecCCCccCCCCCCceeECC-CCcEEEEeCCCCeEEEEccCCcE-EEEecCCccccccccccccc
Q 039428 130 LAAYDLSTWK-RLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKVGVEGQL-LSIIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 130 v~~~d~~~~~-~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~g~~-~~~~~~~~~~~~~~~~~~~~ 206 (335)
|..||.+++. ...... + . ....+.++++| +++++++.+..+.|..+|..... ...+... ....
T Consensus 121 v~lWd~~~~~~~~~~~~--~--h-~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~---------~~~~ 186 (304)
T 2ynn_A 121 VKLWNWENNWALEQTFE--G--H-EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG---------QERG 186 (304)
T ss_dssp EEEEEGGGTTEEEEEEC--C--C-CSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECC---------CTTC
T ss_pred EEEEECCCCcchhhhhc--c--c-CCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccC---------CcCc
Confidence 9999988763 332221 1 1 34567899998 57888888888999999975322 1111000 1122
Q ss_pred cCeEEEcc--CCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 207 LNGIVYHP--DGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 207 p~Gia~~~--dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
.+.+++.+ ++.++++-..++.|..+|...++ ....+. + . ......+++.+++.++++....+.+++.+...+
T Consensus 187 v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~-~~~~~~--~-h-~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 187 VNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS-CVATLE--G-H-MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp EEEEEECCSTTCCEEEEEETTSEEEEEETTTTE-EEEEEE--C-C-SSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred EEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc-cceeeC--C-C-CCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 45677766 66677777889999999998863 444443 2 1 123567899999988777665577888887654
No 181
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.67 E-value=1.1e-05 Score=74.00 Aligned_cols=157 Identities=11% Similarity=0.090 Sum_probs=103.9
Q ss_pred ceeeeEEcC-CCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 50 LCETAKWDD-VGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 50 ~pegia~d~-~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
...+++|++ +++.+++...++.|..||.. +.. +. .+..... .......+++++ +++++++.. .. +
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~----~~--~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~-~d----~ 185 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFS-GSV----IQ--VFAKTDS-WDYWYCCVDVSV-SRQMLATGD-ST----G 185 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETT-SCE----EE--EEECCCC-SSCCEEEEEEET-TTTEEEEEE-TT----S
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECC-CCc----eE--EEeccCC-CCCCeEEEEECC-CCCEEEEEC-CC----C
Confidence 457899999 56777666888999999964 431 22 1221111 113468999998 455444322 21 4
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCC-----cEEEEecCCccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEG-----QLLSIIRSPLFTAKEWYK 202 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g-----~~~~~~~~~~~~~~~~~~ 202 (335)
.|..||.++..+. .... . ......++++++|+ ++++.+..+.|..+|... .....++
T Consensus 186 ~i~i~d~~~~~~~-~~~~----h-~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----------- 248 (383)
T 3ei3_B 186 RLLLLGLDGHEIF-KEKL----H-KAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP----------- 248 (383)
T ss_dssp EEEEEETTSCEEE-EEEC----S-SSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE-----------
T ss_pred CEEEEECCCCEEE-Eecc----C-CCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec-----------
Confidence 6999999644333 2221 1 34667899999998 888888889999999763 3333221
Q ss_pred cccccCeEEEcc-CCeEEEEECCCCEEEEEeCCCCc
Q 039428 203 NVFGLNGIVYHP-DGFLIVIHMCSGNLFKIDIRKEE 237 (335)
Q Consensus 203 ~~~~p~Gia~~~-dg~Lyvad~~~~~v~~~d~~~~~ 237 (335)
.......++++| +|.++++-..++.|..+|+...+
T Consensus 249 ~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 249 HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 112478999999 99777777788999999998753
No 182
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.66 E-value=1.1e-05 Score=74.22 Aligned_cols=221 Identities=11% Similarity=0.105 Sum_probs=130.1
Q ss_pred cceeeeEEc----CCCCE-EEEEecCCeEEEEECCC------CCCCcceee--e-eEEee---cCCcCCCCcceEEEeCC
Q 039428 49 FLCETAKWD----DVGRR-FLVSFLDGGVGQVLVPD------EYSPGTVLE--E-VKLVK---EDDVVGNATMGIAVDRP 111 (335)
Q Consensus 49 ~~pegia~d----~~g~~-~~~~~~~~~I~~~d~~~------g~~~~~v~~--~-~~~~~---~~~~~~~~p~Gi~~d~~ 111 (335)
....+++|+ ++++. +++...++.|..||... +.. +. . ..+.. .+.........+++++
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 196 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT----LNWSPTLELQGTVESPMTPSQFATSVDISE- 196 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT----TCCCCEEEEEEEECCSSSSCCCCCEEEECT-
T ss_pred CcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccce----eeccCcceeeeeeccccCCCCCceEEEECC-
Confidence 446789999 99998 77777889999998644 231 11 0 01110 0011123568999997
Q ss_pred CCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCC-CccCCCCCCceeECCCCcEEEEeCCC---CeEEEEccC-CcE
Q 039428 112 RNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSG-KSEEKSTADDIAVDAEGNAYVTDVVS---SKIWKVGVE-GQL 186 (335)
Q Consensus 112 ~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~p~~~~vd~~G~lyV~d~~~---~~I~~~d~~-g~~ 186 (335)
++ ++++ +... +.|..||.++++......... ..........++++++|+++++.... +.|..+|.. ++.
T Consensus 197 ~~-~l~~-~~~d----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~ 270 (397)
T 1sq9_A 197 RG-LIAT-GFNN----GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER 270 (397)
T ss_dssp TS-EEEE-ECTT----SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE
T ss_pred Cc-eEEE-EeCC----CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc
Confidence 55 4443 3221 469999999887664433200 00002356789999999888877766 899999975 444
Q ss_pred EEEecCCccccc---cccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEecc----CC-------c---
Q 039428 187 LSIIRSPLFTAK---EWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELR----GG-------S--- 249 (335)
Q Consensus 187 ~~~~~~~~~~~~---~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~----g~-------~--- 249 (335)
...+..+..... ...........++++|++.++++-..++.|..+|+...+ ....+... +. .
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~ 349 (397)
T 1sq9_A 271 IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE-RITTLNMHCDDIEIEEDILAVDEHG 349 (397)
T ss_dssp EEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-EEEEEECCGGGCSSGGGCCCBCTTS
T ss_pred cceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc-eeEEEecccCcccchhhhhcccccc
Confidence 443321000000 000012247889999999777777789999999998874 44555411 10 0
Q ss_pred ---CCCCCCeEEEcCCC----------cEEEEecCCCeEEEEEcC
Q 039428 250 ---SLSLGDGLALLSPT----------KLVVAGNPYPSARLVESS 281 (335)
Q Consensus 250 ---~~~~pdGia~d~~g----------~l~va~~~~~~~~v~~~~ 281 (335)
.-.....+++.++| +++++....+.+++.+..
T Consensus 350 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 350 DSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp CBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred ccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 01235789999997 566665545777777654
No 183
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.66 E-value=6.5e-06 Score=77.52 Aligned_cols=212 Identities=9% Similarity=0.037 Sum_probs=134.0
Q ss_pred CCCcceeeeEEcCCCC-EEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCC
Q 039428 46 SPSFLCETAKWDDVGR-RFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLG 124 (335)
Q Consensus 46 ~~~~~pegia~d~~g~-~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~ 124 (335)
+......+++|++++. +++++..++.|..|+...+......+...... ... ......+++++.++.++++..+.
T Consensus 179 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~--~~h-~~~v~~v~~~p~~~~~l~s~~~d-- 253 (430)
T 2xyi_A 179 GHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIF--TGH-TAVVEDVAWHLLHESLFGSVADD-- 253 (430)
T ss_dssp CCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEE--CCC-SSCEEEEEECSSCTTEEEEEETT--
T ss_pred CCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceee--cCC-CCCEeeeEEeCCCCCEEEEEeCC--
Confidence 3333467899999988 77777888999999964422100001100011 111 13568899997566677653322
Q ss_pred CccceEEEEECCCCe---EEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCC--cEEEEecCCccccc
Q 039428 125 NKYSALAAYDLSTWK---RLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEG--QLLSIIRSPLFTAK 198 (335)
Q Consensus 125 ~~~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g--~~~~~~~~~~~~~~ 198 (335)
+.|..||.+++. ....... . ...++.+++.|+|. ++++....+.|..+|... .....+..
T Consensus 254 ---g~i~i~d~~~~~~~~~~~~~~~----~-~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~------ 319 (430)
T 2xyi_A 254 ---QKLMIWDTRNNNTSKPSHTVDA----H-TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES------ 319 (430)
T ss_dssp ---SEEEEEETTCSCSSSCSEEEEC----C-SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC------
T ss_pred ---CeEEEEECCCCCCCcceeEeec----C-CCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec------
Confidence 469999998652 2222211 1 34678899999985 888888889999999764 22221110
Q ss_pred cccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCcee-----------EEEEeccCCcCCCCCCeEEEcCCCc-E
Q 039428 199 EWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEE-----------VKLIELRGGSSLSLGDGLALLSPTK-L 265 (335)
Q Consensus 199 ~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~-----------~~~~~~~g~~~~~~pdGia~d~~g~-l 265 (335)
.......++++|++ .++++....++|..+|+...+.. .......+ . -..+..+++.+++. +
T Consensus 320 ----h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h-~~~v~~~~~~p~~~~~ 393 (430)
T 2xyi_A 320 ----HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-H-TAKISDFSWNPNEPWI 393 (430)
T ss_dssp ----CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC-C-SSCEEEEEECSSSTTE
T ss_pred ----CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCC-C-CCCceEEEECCCCCCE
Confidence 11237899999998 78888888999999998762100 11222222 2 23478999999997 7
Q ss_pred EEEecCCCeEEEEEcCC
Q 039428 266 VVAGNPYPSARLVESSD 282 (335)
Q Consensus 266 ~va~~~~~~~~v~~~~~ 282 (335)
+++....+.+++.+...
T Consensus 394 l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 394 ICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEEEETTSEEEEEEECH
T ss_pred EEEEECCCCEEEeEccc
Confidence 77766557788877643
No 184
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.66 E-value=7.2e-06 Score=83.14 Aligned_cols=233 Identities=16% Similarity=0.122 Sum_probs=131.9
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCC-cCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDD-VVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~-~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
..++.-|++|++|+.+ .+.|.++++.+++ +.......... ...+....|..|. +|+||+++.. ..
T Consensus 375 v~~i~~d~~g~lWigt--~~GL~~~~~~~~~-----~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lWigT~~------~G 440 (758)
T 3ott_A 375 IRHIYEDKEQQLWIAT--DGSINRYDYATRQ-----FIHYNIVDNTGTYNTNWTYYIFEDT-AGQLWISTCL------GG 440 (758)
T ss_dssp EEEEEECTTSCEEEEE--TTEEEEEETTTTE-----EEEEEEECCC--CBSSSEEEEEECT-TSEEEEEESS------SC
T ss_pred eEEEEECCCCCEEEEe--CCcHhhcCcCCCc-----EEEeecCCCcCCCCCceEEEEEEcC-CCCEEEEECC------Cc
Confidence 4577889999988776 4589999964443 22111111111 1123456788885 8999996432 24
Q ss_pred EEEEECCC------CeEE--EEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCcccccccc
Q 039428 130 LAAYDLST------WKRL--FLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWY 201 (335)
Q Consensus 130 v~~~d~~~------~~~~--~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~ 201 (335)
|.++|+++ +... ..... ..+........+..|++|++|+.....+.|+++|++.+....+......
T Consensus 441 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~----- 514 (758)
T 3ott_A 441 IFVVDKHKLMQSTSGQYIAEQNYSV-HNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELT----- 514 (758)
T ss_dssp EEEEEHHHHHHCCSSEEECSEEECG-GGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSC-----
T ss_pred eEEEccccccccCCcceeccccccc-ccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcC-----
Confidence 99999753 2221 11111 0111123456789999999999433346799999986554433111110
Q ss_pred ccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcC
Q 039428 202 KNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESS 281 (335)
Q Consensus 202 ~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~ 281 (335)
....++.+..+.+|+||++.. +-|.++++... ..+.+...+ -......++..+ +|+||++.. +++..++..
T Consensus 515 -~~~~~~~i~~d~~g~lWigt~--~Gl~~~~~~~~--~~~~~~~~g-l~~~~i~~i~~~-~g~lWi~t~--~Gl~~~~~~ 585 (758)
T 3ott_A 515 -GEKSPNYLLCDEDGLLWVGFH--GGVMRINPKDE--SQQSISFGS-FSNNEILSMTCV-KNSIWVSTT--NGLWIIDRK 585 (758)
T ss_dssp -GGGCEEEEEECTTSCEEEEET--TEEEEECC--C--CCCBCCCCC----CCEEEEEEE-TTEEEEEES--SCEEEEETT
T ss_pred -CCcccceEEECCCCCEEEEec--CceEEEecCCC--ceEEecccC-CCccceEEEEEC-CCCEEEECC--CCeEEEcCC
Confidence 123477899999999999974 34999998776 223232111 101235667665 799999976 668777765
Q ss_pred CCcEEEEEeeeecCCCCCcceEEEEe--CCeEEEEeccC
Q 039428 282 DGWETASVVAKFNGPTHRVATAATVK--DGRVYLSHLLG 318 (335)
Q Consensus 282 ~~~~~~~~~~~~~~p~~~~Pt~va~~--~g~lyV~~~~~ 318 (335)
..- . . .+..+...+ ++..++ +|+||+....|
T Consensus 586 ~~~-~-~---~~~~~~~~~-~~~~~~~~~G~l~fG~~~G 618 (758)
T 3ott_A 586 TMD-A-R---QQNMTNKRF-TSLLFDPKEDCVYLGGADG 618 (758)
T ss_dssp TCC-E-E---EC--CCCCC-SEEEEETTTTEEEEECBSE
T ss_pred Cce-e-E---EecCCCCce-eeeEEECCCCcEEEecCCc
Confidence 431 1 1 111222222 233443 89999855444
No 185
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.66 E-value=9e-06 Score=74.73 Aligned_cols=222 Identities=11% Similarity=0.027 Sum_probs=129.8
Q ss_pred CcceeeeEEcCC----C---CEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcC--CCCcceEEEe----CCCCe
Q 039428 48 SFLCETAKWDDV----G---RRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVV--GNATMGIAVD----RPRNR 114 (335)
Q Consensus 48 ~~~pegia~d~~----g---~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~--~~~p~Gi~~d----~~~g~ 114 (335)
.....+++|+++ | +.+++...++.|..|+..++..+..... ..+...... ......++++ +++..
T Consensus 62 ~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 139 (397)
T 1sq9_A 62 KSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIF--EKLDLLDSDMKKHSFWALKWGASNDRLLSH 139 (397)
T ss_dssp TTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEE--EEECCSCTTGGGSCEEEEEEECCC----CE
T ss_pred CCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccc--eeecccccccCCCcEEEEEEeeccCCCCce
Confidence 334578999998 8 8877777789999988543331000000 111111000 1356889999 74444
Q ss_pred -EEEEEecCCCCccceEEEEECCC------CeEEE-----Eeec--CCCccCCCCCCceeECCCCcEEEEeCCCCeEEEE
Q 039428 115 -LLVAFTDVLGNKYSALAAYDLST------WKRLF-----LTQL--SGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKV 180 (335)
Q Consensus 115 -l~v~~~D~~~~~~~~v~~~d~~~------~~~~~-----~~~~--~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~ 180 (335)
|+++..| +.|..||..+ ++... .... ............++++++| ++++....+.|..+
T Consensus 140 ~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 140 RLVATDVK------GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 212 (397)
T ss_dssp EEEEEETT------SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred EEEEEeCC------CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEE
Confidence 4443222 3488888776 32111 1100 0001114567889999999 88888889999999
Q ss_pred ccCC-cEEEEecCCccccccccccccccCeEEEccCCeEEEEECCC---CEEEEEeCCCCceeEEEEeccCC--------
Q 039428 181 GVEG-QLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCS---GNLFKIDIRKEEEEVKLIELRGG-------- 248 (335)
Q Consensus 181 d~~g-~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~---~~v~~~d~~~~~~~~~~~~~~g~-------- 248 (335)
|... +....+....-. .........++++|++.++++-..+ +.|..+|+...+ ....+.....
T Consensus 213 d~~~~~~~~~~~~~~~h----~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~ 287 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSM----INNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE-RIGSLSVPTHSSQASLGE 287 (397)
T ss_dssp ETTTTEEEEEEECCC-------CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC-EEEEECBC--------CC
T ss_pred ECCCCceeEEEeccccc----cccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc-ccceeccCcccccccccc
Confidence 9874 333323210000 0002247899999999666665566 899999998764 4444542000
Q ss_pred -cCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 249 -SSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 249 -~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
..-.....+++.+++.++++....+.+++.+...+
T Consensus 288 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 288 FAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp BSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred cccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 00123578999999987777555577888887655
No 186
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.66 E-value=3.4e-05 Score=70.05 Aligned_cols=198 Identities=10% Similarity=0.058 Sum_probs=125.2
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
....++|++++.+++.+..++.|..||..+++. +. .+. ... .....++++|++..|..+..| ..
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~----~~--~~~-~h~---~~v~~v~~sp~~~~l~s~~~d------~~ 141 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWDKTLRLWDLRTGTT----YK--RFV-GHQ---SEVYSVAFSPDNRQILSAGAE------RE 141 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSEEEEEETTSSCE----EE--EEE-CCC---SCEEEEEECSSTTEEEEEETT------SC
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcE----EE--EEc-CCC---CcEEEEEECCCCCEEEEEcCC------CE
Confidence 457899999999887778899999999655541 22 121 111 256789999844444443222 35
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCCC----------cEEEEeCCCCeEEEEccCCcEEEEecCCcccccc
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEG----------NAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKE 199 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G----------~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~ 199 (335)
|..||..+......... ... ......+++.|++ ..+++.+..+.|..+|..++....+..
T Consensus 142 i~~wd~~~~~~~~~~~~--~~~-~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~------- 211 (343)
T 2xzm_R 142 IKLWNILGECKFSSAEK--ENH-SDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKA------- 211 (343)
T ss_dssp EEEEESSSCEEEECCTT--TSC-SSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEEC-------
T ss_pred EEEEeccCCceeeeecc--cCC-CceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcC-------
Confidence 99999875433221111 011 2334566677665 677887888999999977655433211
Q ss_pred ccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEE
Q 039428 200 WYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVE 279 (335)
Q Consensus 200 ~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~ 279 (335)
.....+.++++|+|.++++-..++.|..+|+.........+.. + .....+++.+++.++.+.. .+.+++.+
T Consensus 212 ---h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~-~----~~v~~v~~sp~~~~la~~~-d~~v~iw~ 282 (343)
T 2xzm_R 212 ---HESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDA-G----STINQIAFNPKLQWVAVGT-DQGVKIFN 282 (343)
T ss_dssp ---CSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEEC-S----SCEEEEEECSSSCEEEEEE-SSCEEEEE
T ss_pred ---ccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecC-C----CcEEEEEECCCCCEEEEEC-CCCEEEEE
Confidence 1123788999999987788888999999998443112233322 2 1256899999988666544 25688877
Q ss_pred cCC
Q 039428 280 SSD 282 (335)
Q Consensus 280 ~~~ 282 (335)
...
T Consensus 283 ~~~ 285 (343)
T 2xzm_R 283 LMT 285 (343)
T ss_dssp SSS
T ss_pred eCC
Confidence 654
No 187
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.66 E-value=1e-05 Score=81.80 Aligned_cols=202 Identities=10% Similarity=0.016 Sum_probs=134.2
Q ss_pred CCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCc
Q 039428 47 PSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNK 126 (335)
Q Consensus 47 ~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~ 126 (335)
......+++|+++++.++++..++.|..||..+++. +. .+.... .....+++++++..|.++..|
T Consensus 54 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~----~~---~~~~~~---~~v~~~~~s~~~~~l~~~~~d----- 118 (814)
T 3mkq_A 54 TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK----VV---DFEAHP---DYIRSIAVHPTKPYVLSGSDD----- 118 (814)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE----EE---EEECCS---SCEEEEEECSSSSEEEEEETT-----
T ss_pred CCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE----EE---EEecCC---CCEEEEEEeCCCCEEEEEcCC-----
Confidence 334468999999999888888899999999655541 22 222111 256789999844445443222
Q ss_pred cceEEEEECCCC-eEEEEeecCCCccCCCCCCceeECC-CCcEEEEeCCCCeEEEEccCCc-EEEEecCCcccccccccc
Q 039428 127 YSALAAYDLSTW-KRLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAKEWYKN 203 (335)
Q Consensus 127 ~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~~~~~~ 203 (335)
..|..||.+++ ........ . ......++++| +|+.+++.+..+.|..+|.... ....+... .
T Consensus 119 -g~i~vw~~~~~~~~~~~~~~----~-~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~---------~ 183 (814)
T 3mkq_A 119 -LTVKLWNWENNWALEQTFEG----H-EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG---------Q 183 (814)
T ss_dssp -SEEEEEEGGGTSEEEEEEEC----C-SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECC---------C
T ss_pred -CEEEEEECCCCceEEEEEcC----C-CCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecC---------C
Confidence 35999998876 33322221 1 34567899999 7888888888899999997543 22111110 1
Q ss_pred ccccCeEEEcc--CCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcC
Q 039428 204 VFGLNGIVYHP--DGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESS 281 (335)
Q Consensus 204 ~~~p~Gia~~~--dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~ 281 (335)
....+.++++| ++.++++-..+++|..+|...++ ....+.... .....+++.++|.++++....+.+++.+..
T Consensus 184 ~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~-~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~ 258 (814)
T 3mkq_A 184 ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS-CVATLEGHM----SNVSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (814)
T ss_dssp TTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE-EEEEEECCS----SCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred CCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc-EEEEEcCCC----CCEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 13478899999 88777777889999999998763 444443221 336789999999877775545678888876
Q ss_pred CC
Q 039428 282 DG 283 (335)
Q Consensus 282 ~~ 283 (335)
.+
T Consensus 259 ~~ 260 (814)
T 3mkq_A 259 TY 260 (814)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 188
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.64 E-value=3.9e-06 Score=77.64 Aligned_cols=214 Identities=7% Similarity=0.078 Sum_probs=131.0
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
...+++|+++++++++...++.|..|+....... ... ........ .....+++++++++++++.. .. ..
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~---~~~--~~~~~~h~-~~v~~~~~~~~~~~~l~s~~-~d----g~ 137 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNA---INS--MARFSNHS-SSVKTVKFNAKQDNVLASGG-NN----GE 137 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSC---CCE--EEECCCSS-SCCCEEEECSSSTTBEEEEC-SS----SC
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeeccccccc---ccc--hhhccCCc-cceEEEEEcCCCCCEEEEEc-CC----Ce
Confidence 3568999999998888878899999986431100 000 11112111 35678999985355555422 21 35
Q ss_pred EEEEECCCCe------EEEEeecCCCccCCCCCCceeECCC-CcEEEEeCCCCeEEEEccCCcE-EEEecCCcccccccc
Q 039428 130 LAAYDLSTWK------RLFLTQLSGKSEEKSTADDIAVDAE-GNAYVTDVVSSKIWKVGVEGQL-LSIIRSPLFTAKEWY 201 (335)
Q Consensus 130 v~~~d~~~~~------~~~~~~~~~~~~~~~~p~~~~vd~~-G~lyV~d~~~~~I~~~d~~g~~-~~~~~~~~~~~~~~~ 201 (335)
|..||.++++ ...... ...........+++.++ ++++++....+.|..+|.+... ...+...... .
T Consensus 138 v~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~----~ 211 (416)
T 2pm9_A 138 IFIWDMNKCTESPSNYTPLTPG--QSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPN----S 211 (416)
T ss_dssp EEBCBTTTTSSCTTTCCCBCCC--CSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCS----S
T ss_pred EEEEECCCCccccccccccccc--cccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccc----c
Confidence 9999998765 221110 00111356788999999 6888888889999999987543 3322211000 0
Q ss_pred ccccccCeEEEccCC-eEEEEECCCC---EEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcC-CCcEEEEecCCCeEE
Q 039428 202 KNVFGLNGIVYHPDG-FLIVIHMCSG---NLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLS-PTKLVVAGNPYPSAR 276 (335)
Q Consensus 202 ~~~~~p~Gia~~~dg-~Lyvad~~~~---~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~-~g~l~va~~~~~~~~ 276 (335)
......+.++++|++ +++++-..++ .|..+|....+.....+.. + . -.....+++.+ +++++++....+.++
T Consensus 212 ~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~-~-~-~~~v~~~~~s~~~~~~l~s~~~dg~v~ 288 (416)
T 2pm9_A 212 GIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQ-G-H-QKGILSLDWCHQDEHLLLSSGRDNTVL 288 (416)
T ss_dssp CCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCS-C-C-SSCEEEEEECSSCSSCEEEEESSSEEE
T ss_pred ccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeec-C-c-cCceeEEEeCCCCCCeEEEEeCCCCEE
Confidence 002347899999998 6777766666 8999999875212222220 1 1 13367899998 787777755457788
Q ss_pred EEEcCCC
Q 039428 277 LVESSDG 283 (335)
Q Consensus 277 v~~~~~~ 283 (335)
+.+...+
T Consensus 289 ~wd~~~~ 295 (416)
T 2pm9_A 289 LWNPESA 295 (416)
T ss_dssp EECSSSC
T ss_pred EeeCCCC
Confidence 8876654
No 189
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.64 E-value=1.2e-05 Score=78.31 Aligned_cols=205 Identities=8% Similarity=-0.027 Sum_probs=126.6
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCC-cceEEEeC--CCCeEEEEEecCCCCc
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNA-TMGIAVDR--PRNRLLVAFTDVLGNK 126 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~-p~Gi~~d~--~~g~l~v~~~D~~~~~ 126 (335)
.+..++|+|+|+++++.. ++.|..||..++..+.+... .+.... .. ...++++| ++..|+.+..|
T Consensus 20 ~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~---~~~~h~---~~~v~~~~~sp~~~~~~l~s~~~d----- 87 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVV---QFTGHG---SSVVTTVKFSPIKGSQYLCSGDES----- 87 (615)
T ss_dssp CCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEE---EECTTT---TSCEEEEEECSSTTCCEEEEEETT-----
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccce---EEecCC---CceEEEEEECcCCCCCEEEEecCC-----
Confidence 467899999999877775 78999998654510000011 222221 24 68999997 54545443222
Q ss_pred cceEEEEECCCC------eEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCC----CeEEEEccCCcEEEEecCCccc
Q 039428 127 YSALAAYDLSTW------KRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVS----SKIWKVGVEGQLLSIIRSPLFT 196 (335)
Q Consensus 127 ~~~v~~~d~~~~------~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~----~~I~~~d~~g~~~~~~~~~~~~ 196 (335)
..|..||.+++ +......+... ......++++++|+..++-... +.|+.+|. ++....+..
T Consensus 88 -g~v~vw~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~-~~~~~~~~~---- 158 (615)
T 1pgu_A 88 -GKVIVWGWTFDKESNSVEVNVKSEFQVL---AGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS-GNSLGEVSG---- 158 (615)
T ss_dssp -SEEEEEEEEEEGGGTEEEEEEEEEEECC---SSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT-CCEEEECCS----
T ss_pred -CEEEEEeCCCCcccccccccccchhhcc---cccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC-CCcceeeec----
Confidence 35889998654 22222222111 3456789999999866654443 68888884 444332211
Q ss_pred cccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCC-CcEEEEecCCCe
Q 039428 197 AKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSP-TKLVVAGNPYPS 274 (335)
Q Consensus 197 ~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~-g~l~va~~~~~~ 274 (335)
.......++++|++ .++++-..++.|..+|....+ ....+...... -.....+++.++ ++++++....+.
T Consensus 159 ------~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~ 230 (615)
T 1pgu_A 159 ------HSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK-FSASDRTHHKQ-GSFVRDVEFSPDSGEFVITVGSDRK 230 (615)
T ss_dssp ------CSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE-EEEEECSSSCT-TCCEEEEEECSTTCCEEEEEETTCC
T ss_pred ------CCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc-eeeeecccCCC-CceEEEEEECCCCCCEEEEEeCCCe
Confidence 11237889999999 478888889999999988763 33334321100 003568999999 887776544467
Q ss_pred EEEEEcCCC
Q 039428 275 ARLVESSDG 283 (335)
Q Consensus 275 ~~v~~~~~~ 283 (335)
+++.+...+
T Consensus 231 i~vwd~~~~ 239 (615)
T 1pgu_A 231 ISCFDGKSG 239 (615)
T ss_dssp EEEEETTTC
T ss_pred EEEEECCCC
Confidence 888887654
No 190
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.64 E-value=5.4e-05 Score=80.49 Aligned_cols=164 Identities=11% Similarity=0.037 Sum_probs=109.2
Q ss_pred EEEcCCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEec
Q 039428 42 YQYHSPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTD 121 (335)
Q Consensus 42 ~~~~~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D 121 (335)
+.+.+......+++|+++|+.+++...++.|..||..+++. +. .+ .+. ......+++++ ++++.++...
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~----~~---~~--~~h-~~~v~~~~~s~-~~~~l~s~~~ 677 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEK----LL---DI--KAH-EDEVLCCAFSS-DDSYIATCSA 677 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE----EE---EE--CCC-SSCEEEEEECT-TSSEEEEEET
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCE----EE---Ee--ccC-CCCEEEEEEec-CCCEEEEEeC
Confidence 34444444567899999999888778899999999655541 11 22 221 13568999998 5555554322
Q ss_pred CCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCC--CcEEEEeCCCCeEEEEccCCc-EEEEecCCccccc
Q 039428 122 VLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE--GNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAK 198 (335)
Q Consensus 122 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~--G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~ 198 (335)
. +.|.+||..+++....... . ....+.+++.++ +.++++.+..+.|..+|.+.. ....+..
T Consensus 678 d-----~~v~vwd~~~~~~~~~~~~--~---~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~------ 741 (1249)
T 3sfz_A 678 D-----KKVKIWDSATGKLVHTYDE--H---SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG------ 741 (1249)
T ss_dssp T-----SEEEEEETTTCCEEEEEEC--C---SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC------
T ss_pred C-----CeEEEEECCCCceEEEEcC--C---CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC------
Confidence 1 3699999998877644332 1 345567888884 457788888899999997643 3332211
Q ss_pred cccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCC
Q 039428 199 EWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKE 236 (335)
Q Consensus 199 ~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~ 236 (335)
.....+.++++|+|..+++-+.++.|..+|....
T Consensus 742 ----h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 742 ----HTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp ----CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred ----CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCC
Confidence 1123678899999977777777888888887665
No 191
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.63 E-value=4.2e-05 Score=70.39 Aligned_cols=215 Identities=8% Similarity=-0.007 Sum_probs=123.7
Q ss_pred ceeeeEEcCCCC-EEEEEecCCeEEEEEC----CCCCCCcceeeeeEEeecC--Cc-----CCCCcceEEEeCCCCeEEE
Q 039428 50 LCETAKWDDVGR-RFLVSFLDGGVGQVLV----PDEYSPGTVLEEVKLVKED--DV-----VGNATMGIAVDRPRNRLLV 117 (335)
Q Consensus 50 ~pegia~d~~g~-~~~~~~~~~~I~~~d~----~~g~~~~~v~~~~~~~~~~--~~-----~~~~p~Gi~~d~~~g~l~v 117 (335)
...+++|+|+|+ +++++..++.|..|+. .+++...+ +.....+..+ .. .......+++++ ++.+++
T Consensus 47 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~ 124 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWK-LTIIAELRHPFALSASSGKTTNQVTCLAWSH-DGNSIV 124 (425)
T ss_dssp CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEE-EEEEEEEECCCCCC------CBCEEEEEECT-TSSEEE
T ss_pred ceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccc-ccccccccccccccccccCCCCceEEEEEcC-CCCEEE
Confidence 346899999999 7777777899999986 44431000 0000111111 10 112568999998 555444
Q ss_pred EEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC-cEEEEecCCcc-
Q 039428 118 AFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG-QLLSIIRSPLF- 195 (335)
Q Consensus 118 ~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~- 195 (335)
+.. .. +.|..||.. ++....... . ......+++.++|+.+++....+.|..+|... +....+....-
T Consensus 125 ~~~-~d----g~i~i~~~~-~~~~~~~~~----~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 193 (425)
T 1r5m_A 125 TGV-EN----GELRLWNKT-GALLNVLNF----H-RAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETG 193 (425)
T ss_dssp EEE-TT----SCEEEEETT-SCEEEEECC----C-CSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---
T ss_pred EEe-CC----CeEEEEeCC-CCeeeeccC----C-CccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccC
Confidence 322 21 359999954 444322221 1 34567899999998777767778899888753 33322211000
Q ss_pred ----------------c-------------------------ccc----ccccccccCeEEEccCCeEEEEECCCCEEEE
Q 039428 196 ----------------T-------------------------AKE----WYKNVFGLNGIVYHPDGFLIVIHMCSGNLFK 230 (335)
Q Consensus 196 ----------------~-------------------------~~~----~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~ 230 (335)
. ... ..........++++|++.++++-..++.|..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 273 (425)
T 1r5m_A 194 GSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRI 273 (425)
T ss_dssp ------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 0 000 0011223577899999966666667888999
Q ss_pred EeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 231 IDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 231 ~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
+|....+ ....+.... .....+++.+++ ++++....+.+++.+...+
T Consensus 274 ~d~~~~~-~~~~~~~~~----~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~ 320 (425)
T 1r5m_A 274 WHGGNGN-SQNCFYGHS----QSIVSASWVGDD-KVISCSMDGSVRLWSLKQN 320 (425)
T ss_dssp ECSSSBS-CSEEECCCS----SCEEEEEEETTT-EEEEEETTSEEEEEETTTT
T ss_pred EECCCCc-cceEecCCC----ccEEEEEECCCC-EEEEEeCCCcEEEEECCCC
Confidence 9987753 334443211 235789999988 5555444477888887654
No 192
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.63 E-value=5.6e-05 Score=70.10 Aligned_cols=210 Identities=10% Similarity=0.033 Sum_probs=126.3
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
....+++|+++++.+++...++.|..||..+++. .. .+... .....+++.+.+++++++.... +
T Consensus 166 ~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~----~~---~~~~~----~~v~~~~~~~~~~~~l~~~s~d-----~ 229 (393)
T 1erj_A 166 QDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC----SL---TLSIE----DGVTTVAVSPGDGKYIAAGSLD-----R 229 (393)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE----EE---EEECS----SCEEEEEECSTTCCEEEEEETT-----S
T ss_pred CCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee----EE---EEEcC----CCcEEEEEECCCCCEEEEEcCC-----C
Confidence 3457899999999888878899999999654441 11 22221 2456788887456666543221 3
Q ss_pred eEEEEECCCCeEEEEeecCCC--ccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEE-ecCC---ccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGK--SEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSI-IRSP---LFTAKEWYK 202 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~--~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~-~~~~---~~~~~~~~~ 202 (335)
.|..||.++++.......... .........++++++|+.+++.+..+.|..+|........ ...+ .... ....
T Consensus 230 ~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~-~~~~ 308 (393)
T 1erj_A 230 AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEV-TYIG 308 (393)
T ss_dssp CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEE-EEEC
T ss_pred cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceE-EEec
Confidence 599999998876533321100 0013456789999999988888888999999875321110 0000 0000 0001
Q ss_pred cccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcC------CCcEEEEecCCCeEE
Q 039428 203 NVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLS------PTKLVVAGNPYPSAR 276 (335)
Q Consensus 203 ~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~------~g~l~va~~~~~~~~ 276 (335)
.......+++++++..+++-..++.|..+|...++ ....+. + + -.....+++.+ +++++++....+.++
T Consensus 309 h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~-~~~~l~--~-h-~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~ 383 (393)
T 1erj_A 309 HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN-PLLMLQ--G-H-RNSVISVAVANGSSLGPEYNVFATGSGDCKAR 383 (393)
T ss_dssp CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC-EEEEEE--C-C-SSCEEEEEECSSCTTCTTCEEEEEEETTSEEE
T ss_pred ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe-EEEEEC--C-C-CCCEEEEEecCCcCcCCCCCEEEEECCCCcEE
Confidence 11235689999999777777788999999998764 444443 2 1 12234566543 677777765556677
Q ss_pred EEEc
Q 039428 277 LVES 280 (335)
Q Consensus 277 v~~~ 280 (335)
+.+.
T Consensus 384 iW~~ 387 (393)
T 1erj_A 384 IWKY 387 (393)
T ss_dssp EEEE
T ss_pred ECcc
Confidence 6654
No 193
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.62 E-value=3.3e-05 Score=71.35 Aligned_cols=209 Identities=9% Similarity=0.060 Sum_probs=130.5
Q ss_pred eeeeEEcCCCC-EEEEEecCCeEEEEECCCCCCCcceeeeeEEeec--CCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 51 CETAKWDDVGR-RFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKE--DDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 51 pegia~d~~g~-~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~--~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
...+++.+++. .++++..++.|..||..+++. +. .... +.........+.+.+.+++++++....
T Consensus 160 v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~----~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D----- 227 (380)
T 3iz6_a 160 ASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR----IS---IFGSEFPSGHTADVLSLSINSLNANMFISGSCD----- 227 (380)
T ss_dssp CCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE----EE---EECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-----
T ss_pred eEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE----EE---EeecccCCCCccCeEEEEeecCCCCEEEEEECC-----
Confidence 35667777644 455667889999999655541 11 1111 111112456778876466666643221
Q ss_pred ceEEEEECCC-CeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC-cEEEEecCCcccccccccccc
Q 039428 128 SALAAYDLST-WKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG-QLLSIIRSPLFTAKEWYKNVF 205 (335)
Q Consensus 128 ~~v~~~d~~~-~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~~~~~~~~~~~ 205 (335)
..|..||.+. ++....... . ....+.+++.|+|+.+++.+..+.|..+|... +....+....... .....
T Consensus 228 ~~v~~wd~~~~~~~~~~~~~----h-~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~---~~~~~ 299 (380)
T 3iz6_a 228 TTVRLWDLRITSRAVRTYHG----H-EGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN---DNELP 299 (380)
T ss_dssp SCEEEEETTTTCCCCEEECC----C-SSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSS---CCSSC
T ss_pred CeEEEEECCCCCcceEEECC----c-CCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccc---ccccC
Confidence 3599999873 333222111 1 34578899999999999999999999999874 4444332111000 01112
Q ss_pred ccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEec-cCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcC
Q 039428 206 GLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIEL-RGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESS 281 (335)
Q Consensus 206 ~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~-~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~ 281 (335)
....++++|+|.++++-..++.|+.+|....+ ....+.. ...+ ......+++.++|.++++....+.+++.+..
T Consensus 300 ~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~-~~~~~~~~~~~h-~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 300 IVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE-MVLNLGTLQNSH-EGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp SCSEEEECSSSSEEEEECTTSCEEEEETTTCC-EEEEECCSCSSC-CCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred ceEEEEECCCCCEEEEEECCCCEEEEECCCCc-eEEEEecccCCC-CCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 36899999999888888889999999987763 3333321 1112 2346789999999988886655678777654
No 194
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.62 E-value=0.00011 Score=68.19 Aligned_cols=199 Identities=11% Similarity=0.059 Sum_probs=127.7
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
.....++|+ ++.++++..++.|..+|...... ... .+.... ....++++++ ++.++++.... +
T Consensus 177 ~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~---~~~---~~~~~~---~~v~~~~~~~-~~~~l~s~~~d-----~ 239 (401)
T 4aez_A 177 ARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANH---QIG---TLQGHS---SEVCGLAWRS-DGLQLASGGND-----N 239 (401)
T ss_dssp SCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC---EEE---EEECCS---SCEEEEEECT-TSSEEEEEETT-----S
T ss_pred CceEEEEEC--CCEEEEEcCCCCEEEEecccCcc---eee---EEcCCC---CCeeEEEEcC-CCCEEEEEeCC-----C
Confidence 345678884 46777778899999999642331 111 221111 3568999998 55555432221 3
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCC-cEEEEeC--CCCeEEEEccCC-cEEEEecCCccccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEG-NAYVTDV--VSSKIWKVGVEG-QLLSIIRSPLFTAKEWYKNV 204 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G-~lyV~d~--~~~~I~~~d~~g-~~~~~~~~~~~~~~~~~~~~ 204 (335)
.|..||.++++....... . ......+++.|+| +++++.. ..+.|..+|... +....+.. .
T Consensus 240 ~v~iwd~~~~~~~~~~~~----~-~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~-----------~ 303 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTN----H-NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA-----------G 303 (401)
T ss_dssp CEEEEETTCSSEEEEECC----C-SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC-----------S
T ss_pred eEEEccCCCCCccEEecC----C-cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC-----------C
Confidence 599999998776643321 1 3456789999986 5777754 689999999764 44332221 1
Q ss_pred cccCeEEEccCCeEEEE--ECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCC
Q 039428 205 FGLNGIVYHPDGFLIVI--HMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSD 282 (335)
Q Consensus 205 ~~p~Gia~~~dg~Lyva--d~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~ 282 (335)
.....++++|++..+++ ...++.|..++....+ ......+.+ . ......+++.++|.++++....+.+++.+..+
T Consensus 304 ~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~-~~~~~~~~~-h-~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 304 SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG-LTKQVDIPA-H-DTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE-EEEEEEEEC-C-SSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc-ceeEEEecC-C-CCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 23789999999955444 3468899999988763 233333323 2 23478899999998777755557788888765
Q ss_pred C
Q 039428 283 G 283 (335)
Q Consensus 283 ~ 283 (335)
+
T Consensus 381 ~ 381 (401)
T 4aez_A 381 G 381 (401)
T ss_dssp -
T ss_pred C
Confidence 4
No 195
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.62 E-value=1.9e-05 Score=72.68 Aligned_cols=191 Identities=15% Similarity=0.089 Sum_probs=103.4
Q ss_pred CEEEEEecCCeEEEEECCCCCCCcceeeeeEEee-cCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCe
Q 039428 61 RRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVK-EDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWK 139 (335)
Q Consensus 61 ~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~-~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~ 139 (335)
+.+|+...++.|+.+|..+|+. . |.. .+.. ......++ ++.+|+...+ ..|+.+|+++|+
T Consensus 104 ~~v~v~~~~g~l~a~d~~tG~~----~----W~~~~~~~---~~~~p~~~--~~~v~v~~~~------g~l~~~d~~tG~ 164 (376)
T 3q7m_A 104 GHVYIGSEKAQVYALNTSDGTV----A----WQTKVAGE---ALSRPVVS--DGLVLIHTSN------GQLQALNEADGA 164 (376)
T ss_dssp TEEEEEETTSEEEEEETTTCCE----E----EEEECSSC---CCSCCEEE--TTEEEEECTT------SEEEEEETTTCC
T ss_pred CEEEEEcCCCEEEEEECCCCCE----E----EEEeCCCc---eEcCCEEE--CCEEEEEcCC------CeEEEEECCCCc
Confidence 4555665678999999766651 1 221 1211 11223444 6899995322 359999999998
Q ss_pred EEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccC-CcEEEEecCCcccccccccccccc-CeEEEccCCe
Q 039428 140 RLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVE-GQLLSIIRSPLFTAKEWYKNVFGL-NGIVYHPDGF 217 (335)
Q Consensus 140 ~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~p-~Gia~~~dg~ 217 (335)
.++......+..........+++ +|++|+. ...+.|+.+|++ |+...................... ...++. ++.
T Consensus 165 ~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g-~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~ 241 (376)
T 3q7m_A 165 VKWTVNLDMPSLSLRGESAPTTA-FGAAVVG-GDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV-NGV 241 (376)
T ss_dssp EEEEEECCC-----CCCCCCEEE-TTEEEEC-CTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE-TTE
T ss_pred EEEEEeCCCCceeecCCCCcEEE-CCEEEEE-cCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE-CCE
Confidence 88766553221101111223343 5778885 556899999985 655432211100000000000001 112233 678
Q ss_pred EEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 218 LIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 218 Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
+|++. .++.|+.+|+..++ ....... ..+.+++++ ++++|++... +.+..++..++
T Consensus 242 v~~~~-~~g~l~~~d~~tG~-~~w~~~~------~~~~~~~~~-~~~l~~~~~~-g~l~~~d~~tG 297 (376)
T 3q7m_A 242 VFALA-YNGNLTALDLRSGQ-IMWKREL------GSVNDFIVD-GNRIYLVDQN-DRVMALTIDGG 297 (376)
T ss_dssp EEEEC-TTSCEEEEETTTCC-EEEEECC------CCEEEEEEE-TTEEEEEETT-CCEEEEETTTC
T ss_pred EEEEe-cCcEEEEEECCCCc-EEeeccC------CCCCCceEE-CCEEEEEcCC-CeEEEEECCCC
Confidence 98875 46789999998763 3322222 123456665 6789998652 56888887665
No 196
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.60 E-value=5e-05 Score=75.96 Aligned_cols=199 Identities=12% Similarity=0.117 Sum_probs=130.0
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
...+++++++|++++++..++.|..||..++.. .. .+. ... .....+++++++..|..+..| ..
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~----~~--~~~-~h~---~~v~~~~~s~~~~~l~s~s~D------~~ 495 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVS----TR--RFV-GHT---KDVLSVAFSLDNRQIVSASRD------RT 495 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEE----EE--EEE-CCS---SCEEEEEECTTSSCEEEEETT------SC
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEECCCCcc----ee--EEe-CCC---CCEEEEEEeCCCCEEEEEeCC------CE
Confidence 457899999999888888899999999654431 11 122 111 256789999844445443333 35
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCCC--cEEEEeCCCCeEEEEccCCcE-EEEecCCccccccccccccc
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEG--NAYVTDVVSSKIWKVGVEGQL-LSIIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G--~lyV~d~~~~~I~~~d~~g~~-~~~~~~~~~~~~~~~~~~~~ 206 (335)
|..||..+......... ..+. ....+.+++.+++ ..+++.+..+.|..+|..... ...+.. ....
T Consensus 496 i~iwd~~~~~~~~~~~~-~~~h-~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~----------h~~~ 563 (694)
T 3dm0_A 496 IKLWNTLGECKYTISEG-GEGH-RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG----------HTGY 563 (694)
T ss_dssp EEEECTTSCEEEEECSS-TTSC-SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECC----------CSSC
T ss_pred EEEEECCCCcceeeccC-CCCC-CCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC----------CCCC
Confidence 99999876544322111 1111 2445778999886 577888888999999987543 332211 1123
Q ss_pred cCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 207 LNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 207 p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
.+.++++|+|.++++-+.++.|..+|+..++ ....+. . . .....+++.+++.++++... +.+++.+...+
T Consensus 564 v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~-~~~~~~--~-~--~~v~~~~~sp~~~~l~~~~~-~~i~iwd~~~~ 633 (694)
T 3dm0_A 564 VSTVAVSPDGSLCASGGKDGVVLLWDLAEGK-KLYSLE--A-N--SVIHALCFSPNRYWLCAATE-HGIKIWDLESK 633 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSBCEEEETTTTE-EEECCB--C-S--SCEEEEEECSSSSEEEEEET-TEEEEEETTTT
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-eEEEec--C-C--CcEEEEEEcCCCcEEEEEcC-CCEEEEECCCC
Confidence 6889999999888888889999999998763 222222 2 1 23568899999887766442 56888887654
No 197
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.60 E-value=4.3e-07 Score=87.80 Aligned_cols=116 Identities=17% Similarity=0.239 Sum_probs=78.1
Q ss_pred CCcceEEEeCCCCeEEEEEecCCC----------------CccceEEEEECCCC-----eE---EEEeecCC--------
Q 039428 101 NATMGIAVDRPRNRLLVAFTDVLG----------------NKYSALAAYDLSTW-----KR---LFLTQLSG-------- 148 (335)
Q Consensus 101 ~~p~Gi~~d~~~g~l~v~~~D~~~----------------~~~~~v~~~d~~~~-----~~---~~~~~~~~-------- 148 (335)
.+|.+++++|.++.+|++..+... ++.+.|++|+.+.+ .. ++......
T Consensus 384 dRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~~ 463 (592)
T 4a9v_A 384 DRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPK 463 (592)
T ss_dssp ECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGG
T ss_pred cCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccccc
Confidence 458999999989999998643210 12367999986432 11 12221110
Q ss_pred -------CccCCCCCCceeECCCCcEEE-EeCC-----------CCeEEEEccC-CcEEEEecCCccccccccccccccC
Q 039428 149 -------KSEEKSTADDIAVDAEGNAYV-TDVV-----------SSKIWKVGVE-GQLLSIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 149 -------~~~~~~~p~~~~vd~~G~lyV-~d~~-----------~~~I~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~p~ 208 (335)
....++.|++|+||++|+||| +|.. ++.||+++++ |+..+++..+ ....|+
T Consensus 464 ~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P---------~~aEpn 534 (592)
T 4a9v_A 464 GGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP---------IGCEVT 534 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC---------TTCEEE
T ss_pred cCccCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC---------CCcccc
Confidence 012379999999999999999 8863 4489999996 5554433222 123489
Q ss_pred eEEEccCC-eEEEEECCC
Q 039428 209 GIVYHPDG-FLIVIHMCS 225 (335)
Q Consensus 209 Gia~~~dg-~Lyvad~~~ 225 (335)
|++++||+ .|||+-..-
T Consensus 535 GiafSPD~ktLfV~vQHP 552 (592)
T 4a9v_A 535 GISFSPDQKTLFVGIQHP 552 (592)
T ss_dssp EEEECTTSSEEEEEEEST
T ss_pred CCEECCCCCEEEEEEeCC
Confidence 99999999 899886443
No 198
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.60 E-value=1e-05 Score=79.90 Aligned_cols=198 Identities=12% Similarity=0.057 Sum_probs=124.7
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
.+..++++|+|+.++... .+.|..++..+++. .. .+.... .....++++| +|++.++. +.. ..
T Consensus 20 ~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~----~~---~~~~h~---~~v~~~~~sp-dg~~lasg-~~d----~~ 82 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTD----TE---IYTEHS---HQTTVAKTSP-SGYYCASG-DVH----GN 82 (611)
T ss_dssp CCCCCEECTTSSEEEEEE-TTEEEEEETTCSSC----CE---EECCCS---SCEEEEEECT-TSSEEEEE-ETT----SE
T ss_pred ceeEEeeCCCCCEEEeCC-CCEEEEecCCCccc----Ce---EecCCC---CceEEEEECC-CCcEEEEE-eCC----CC
Confidence 578899999999877665 56999998644441 11 222221 2467899998 67666642 221 35
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCC----CCeEEEEccCCcEEEEecCCcccccccccccc
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV----SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVF 205 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~----~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~ 205 (335)
|..||.++++......+... ....++++++|+|+..++-.. .+.|+.+|.. +... .+.. ...
T Consensus 83 v~lWd~~~~~~~~~~~~~~~---~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~-~~~~-----~l~g-----h~~ 148 (611)
T 1nr0_A 83 VRIWDTTQTTHILKTTIPVF---SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG-TSNG-----NLTG-----QAR 148 (611)
T ss_dssp EEEEESSSTTCCEEEEEECS---SSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC-CBCB-----CCCC-----CSS
T ss_pred EEEeECCCCcceeeEeeccc---CCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC-CCcc-----eecC-----CCC
Confidence 99999865432111112111 245678999999976554332 2478888743 2211 1111 123
Q ss_pred ccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 206 GLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 206 ~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
..+.++|+|++ .++++-..++.|..+|....+ ....+. + + -.....+++.++|+++++....+.+++.+...+
T Consensus 149 ~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~-~~~~l~--~-H-~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g 222 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK-FKSTFG--E-H-TKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG 222 (611)
T ss_dssp CEEEEEECSSSSCEEEEEETTSCEEEEETTTBE-EEEEEC--C-C-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CceEEEECCCCCeEEEEEeCCCeEEEEECCCCe-Eeeeec--c-c-cCceEEEEECCCCCEEEEEECCCcEEEEECCCC
Confidence 47899999998 567788888889988876652 333332 2 2 234678999999998888665577888886554
No 199
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.58 E-value=0.00021 Score=62.82 Aligned_cols=197 Identities=12% Similarity=0.100 Sum_probs=124.0
Q ss_pred CcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 48 SFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
.....+++|+++++.+++...++.|..++..+.... +.+. .+ ... ......+.++ ++.++++..|
T Consensus 59 ~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~-~~~~---~~--~~~-~~~i~~~~~~--~~~l~~~~~d------ 123 (313)
T 3odt_A 59 QGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGE-DPLY---TL--IGH-QGNVCSLSFQ--DGVVISGSWD------ 123 (313)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTS-CC-C---EE--CCC-SSCEEEEEEE--TTEEEEEETT------
T ss_pred CccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCC-Cccc---ch--hhc-ccCEEEEEec--CCEEEEEeCC------
Confidence 334678999999999888888999998885433210 0011 11 111 1245677775 4555554322
Q ss_pred ceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC-CCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccc
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (335)
..|..|| .++....... . ......+++.+ +++.+++....+.|..+|.. +....+... ....
T Consensus 124 ~~i~~~d--~~~~~~~~~~----~-~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~---------~~~~ 186 (313)
T 3odt_A 124 KTAKVWK--EGSLVYNLQA----H-NASVWDAKVVSFSENKFLTASADKTIKLWQND-KVIKTFSGI---------HNDV 186 (313)
T ss_dssp SEEEEEE--TTEEEEEEEC----C-SSCEEEEEEEETTTTEEEEEETTSCEEEEETT-EEEEEECSS---------CSSC
T ss_pred CCEEEEc--CCcEEEeccc----C-CCceeEEEEccCCCCEEEEEECCCCEEEEecC-ceEEEEecc---------Cccc
Confidence 3589999 4444432222 1 23455677776 78877777888999999944 333322110 1123
Q ss_pred cCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 207 LNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 207 p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
...+++++++. +++-..++.|..+|....+ ....+.... .....+++.++|.++.+.. .+.+++.+...+
T Consensus 187 i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~-~~~~~~~~~----~~i~~~~~~~~~~l~~~~~-dg~v~iwd~~~~ 256 (313)
T 3odt_A 187 VRHLAVVDDGH-FISCSNDGLIKLVDMHTGD-VLRTYEGHE----SFVYCIKLLPNGDIVSCGE-DRTVRIWSKENG 256 (313)
T ss_dssp EEEEEEEETTE-EEEEETTSEEEEEETTTCC-EEEEEECCS----SCEEEEEECTTSCEEEEET-TSEEEEECTTTC
T ss_pred EEEEEEcCCCe-EEEccCCCeEEEEECCchh-hhhhhhcCC----ceEEEEEEecCCCEEEEec-CCEEEEEECCCC
Confidence 78899999999 5566688899999998764 444554222 3367899999997655544 467888877654
No 200
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.58 E-value=1.2e-05 Score=75.61 Aligned_cols=189 Identities=14% Similarity=0.102 Sum_probs=112.5
Q ss_pred CCCEEEEEec--C---CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEE
Q 039428 59 VGRRFLVSFL--D---GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAY 133 (335)
Q Consensus 59 ~g~~~~~~~~--~---~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~ 133 (335)
.+++++++.. + ++|+.+|. ++.. .. .+.... .....++++|++..|+.+..|. +. ..|+.+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~-~g~~----~~--~l~~~~----~~v~~~~~Spdg~~la~~s~~~-~~--~~i~~~ 208 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDY-DGYN----QF--VVHRSP----QPLMSPAWSPDGSKLAYVTFES-GR--SALVIQ 208 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEET-TSCS----CE--EEEEES----SCEEEEEECTTSSEEEEEECTT-SS--CEEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcC-CCCC----CE--EEeCCC----CcceeeEEcCCCCEEEEEEecC-CC--cEEEEE
Confidence 3455565532 2 68999985 4542 11 132222 2467899998444455543322 11 369999
Q ss_pred ECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCC--CCeEEEEccCCcEEEEecCCccccccccccccccCeE
Q 039428 134 DLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVV--SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGI 210 (335)
Q Consensus 134 d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~--~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gi 210 (335)
|.++++....... ......++++|||+ ++++.+. ...|+.+|.+++....+.. .......+
T Consensus 209 d~~tg~~~~l~~~------~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~----------~~~~~~~~ 272 (415)
T 2hqs_A 209 TLANGAVRQVASF------PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTD----------GRSNNTEP 272 (415)
T ss_dssp ETTTCCEEEEECC------SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCC----------CSSCEEEE
T ss_pred ECCCCcEEEeecC------CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcC----------CCCcccce
Confidence 9998876533222 23456899999997 6656543 4569999987654442211 01235788
Q ss_pred EEccCC-eEEEEECCC--CEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEecC--CCeEEEEEcCCC
Q 039428 211 VYHPDG-FLIVIHMCS--GNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGNP--YPSARLVESSDG 283 (335)
Q Consensus 211 a~~~dg-~Lyvad~~~--~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~~--~~~~~v~~~~~~ 283 (335)
+++||| .|+++.... .+|+++|++++ ....+...+ .....+++.++|+ |+++... ...+++++...+
T Consensus 273 ~~spdg~~l~~~s~~~g~~~i~~~d~~~~--~~~~l~~~~----~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 273 TWFPDSQNLAFTSDQAGRPQVYKVNINGG--APQRITWEG----SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG 345 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTSS--CCEECCCSS----SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC
T ss_pred EECCCCCEEEEEECCCCCcEEEEEECCCC--CEEEEecCC----CcccCeEECCCCCEEEEEECcCCceEEEEEECCCC
Confidence 999999 577665433 38999999886 333332222 2245789999996 4444331 235777776544
No 201
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.58 E-value=1e-05 Score=73.01 Aligned_cols=209 Identities=11% Similarity=0.059 Sum_probs=129.1
Q ss_pred eeeeEEcCC----CCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCc
Q 039428 51 CETAKWDDV----GRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNK 126 (335)
Q Consensus 51 pegia~d~~----g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~ 126 (335)
..+++|.++ |+++++...++.|..||..+++ .+. .+.... .....+++++.+++++++....
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~----~~~---~~~~~~---~~i~~~~~~~~~~~~l~s~~~d---- 137 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ----CIK---HYVGHG---NAINELKFHPRDPNLLLSVSKD---- 137 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC----EEE---EEESCC---SCEEEEEECSSCTTEEEEEETT----
T ss_pred EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce----Eee---eecCCC---CcEEEEEECCCCCCEEEEEeCC----
Confidence 568899998 5677777889999999865444 122 222111 3568999997345555543221
Q ss_pred cceEEEEECCCCeEEEEee-cCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEE-EecC-Ccccc------
Q 039428 127 YSALAAYDLSTWKRLFLTQ-LSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLS-IIRS-PLFTA------ 197 (335)
Q Consensus 127 ~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~-~~~~-~~~~~------ 197 (335)
+.|..||.++++...... +.. . ......++++++|+.+++....+.|..+|....... .+.. ..+..
T Consensus 138 -g~i~iwd~~~~~~~~~~~~~~~--~-~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (366)
T 3k26_A 138 -HALRLWNIQTDTLVAIFGGVEG--H-RDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRP 213 (366)
T ss_dssp -SCEEEEETTTTEEEEEECSTTS--C-SSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSC
T ss_pred -CeEEEEEeecCeEEEEeccccc--c-cCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCccc
Confidence 359999999887764431 111 1 456788999999988888788899999998743211 0000 00000
Q ss_pred --------cc---ccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCce-------------eEEEEeccCCcCCCC
Q 039428 198 --------KE---WYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEE-------------EVKLIELRGGSSLSL 253 (335)
Q Consensus 198 --------~~---~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~-------------~~~~~~~~g~~~~~~ 253 (335)
+. ..........++++ +.++++-..++.|..+|+...+. ....+... ...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 287 (366)
T 3k26_A 214 FISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYS----QCD 287 (366)
T ss_dssp CCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECS----SCC
T ss_pred ccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheecccccc----CCc
Confidence 00 00022346788888 55667777789999999876420 12223221 123
Q ss_pred CCeEEEcCC--CcEEEEecCCCeEEEEEcCCC
Q 039428 254 GDGLALLSP--TKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 254 pdGia~d~~--g~l~va~~~~~~~~v~~~~~~ 283 (335)
...+++.++ |+++++....+.+++.+...+
T Consensus 288 v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 288 IWYMRFSMDFWQKMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp SSCCCCEECTTSSEEEEECTTSCEEEEECCSS
T ss_pred EEEEEEcCCCCCcEEEEEecCCcEEEEECCCC
Confidence 567888888 887777655577888887654
No 202
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.57 E-value=7.6e-06 Score=71.30 Aligned_cols=185 Identities=12% Similarity=0.086 Sum_probs=111.1
Q ss_pred ceeeeEEcCCCCEEEEEec----CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCC
Q 039428 50 LCETAKWDDVGRRFLVSFL----DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGN 125 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~----~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~ 125 (335)
...+++|+|+|+.+++... ...|+.++..++. .. .+... .....+++++++..|+++.... +.
T Consensus 86 ~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-----~~---~~~~~----~~~~~~~~spdg~~l~~~~~~~-~~ 152 (297)
T 2ojh_A 86 CNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-----PR---LMTKN----LPSYWHGWSPDGKSFTYCGIRD-QV 152 (297)
T ss_dssp BCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-----CE---ECCSS----SSEEEEEECTTSSEEEEEEEET-TE
T ss_pred cccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-----eE---EeecC----CCccceEECCCCCEEEEEECCC-Cc
Confidence 4567999999998877742 4689999854333 11 22122 1356788998555565432211 11
Q ss_pred ccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEe--CCCCeEEEEccCCcEEEEecCCccccccccc
Q 039428 126 KYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTD--VVSSKIWKVGVEGQLLSIIRSPLFTAKEWYK 202 (335)
Q Consensus 126 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d--~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~ 202 (335)
..|+.+|..+++....... ...+..++++|+|+ ++++. .....||.++.+++....+...
T Consensus 153 --~~l~~~~~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~--------- 215 (297)
T 2ojh_A 153 --FDIYSMDIDSGVETRLTHG------EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDS--------- 215 (297)
T ss_dssp --EEEEEEETTTCCEEECCCS------SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCC---------
T ss_pred --eEEEEEECCCCcceEcccC------CCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecC---------
Confidence 3588888877765422111 34567899999997 55554 3456888888766554432110
Q ss_pred cccccCeEEEccCC-eEEEEECC----------CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEE
Q 039428 203 NVFGLNGIVYHPDG-FLIVIHMC----------SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVA 268 (335)
Q Consensus 203 ~~~~p~Gia~~~dg-~Lyvad~~----------~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va 268 (335)
......++++|+| .|+++... ..+|+.+|+++++ ........+ . ......+++.++|+ |+++
T Consensus 216 -~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~~~~~~~-~-~~~~~~~~~spdg~~l~~~ 289 (297)
T 2ojh_A 216 -AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN-VETLFDLFG-G-QGTMNSPNWSPDGDEFAYV 289 (297)
T ss_dssp -SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS-CEEEEEEEE-S-TTTSCSCCBCTTSSEEEEE
T ss_pred -CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC-ceeeeccCC-C-CcccccceECCCCCEEEEE
Confidence 1235678999999 56655442 2679999998863 333332222 1 12356788999986 4444
No 203
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.56 E-value=0.00015 Score=72.55 Aligned_cols=213 Identities=8% Similarity=-0.007 Sum_probs=136.6
Q ss_pred EcCCCcceeeeEEcCCC-CEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecC
Q 039428 44 YHSPSFLCETAKWDDVG-RRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDV 122 (335)
Q Consensus 44 ~~~~~~~pegia~d~~g-~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~ 122 (335)
+.+..-.-.++++++++ ++++++..+++|..|+......... ... ..+.... .....+++++ ++++.++....
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~-~~~-~~~~~h~---~~v~~v~~s~-~g~~l~sgs~D 451 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYG-VAQ-RRLTGHS---HFVEDVVLSS-DGQFALSGSWD 451 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSC-EEE-EEEECCS---SCEEEEEECT-TSSEEEEEETT
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccc-ccc-ceecCCC---CcEEEEEECC-CCCEEEEEeCC
Confidence 33434446788999876 4555558899999998543221000 010 1111111 2467899997 56655543221
Q ss_pred CCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccc
Q 039428 123 LGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYK 202 (335)
Q Consensus 123 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~ 202 (335)
+.|..||..+++....... . ......++++++|+..++.+..+.|..+|..+.....+... .. .
T Consensus 452 -----g~v~vwd~~~~~~~~~~~~----h-~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~-~~-----~ 515 (694)
T 3dm0_A 452 -----GELRLWDLAAGVSTRRFVG----H-TKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEG-GE-----G 515 (694)
T ss_dssp -----SEEEEEETTTTEEEEEEEC----C-SSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSS-TT-----S
T ss_pred -----CcEEEEECCCCcceeEEeC----C-CCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccC-CC-----C
Confidence 4699999998876533221 1 24567899999999888888889999999876544322110 00 0
Q ss_pred cccccCeEEEccCC--eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEc
Q 039428 203 NVFGLNGIVYHPDG--FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVES 280 (335)
Q Consensus 203 ~~~~p~Gia~~~dg--~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~ 280 (335)
.......++++|++ .++++-+.++.|..+|+...+ ....+. + + -.....+++.++|+++++....+.+++.+.
T Consensus 516 h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~-~~~~~~--~-h-~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~ 590 (694)
T 3dm0_A 516 HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK-LRSTLA--G-H-TGYVSTVAVSPDGSLCASGGKDGVVLLWDL 590 (694)
T ss_dssp CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC-EEEEEC--C-C-SSCEEEEEECTTSSEEEEEETTSBCEEEET
T ss_pred CCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc-EEEEEc--C-C-CCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 11236789999987 577777788999999998763 333343 2 2 133578999999998888665577888887
Q ss_pred CCC
Q 039428 281 SDG 283 (335)
Q Consensus 281 ~~~ 283 (335)
..+
T Consensus 591 ~~~ 593 (694)
T 3dm0_A 591 AEG 593 (694)
T ss_dssp TTT
T ss_pred CCC
Confidence 655
No 204
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.56 E-value=2.7e-05 Score=78.16 Aligned_cols=201 Identities=11% Similarity=0.092 Sum_probs=116.3
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCC---CCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDE---YSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g---~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
..+++|+|+|+.+++... +.|+.+|..++ . .. .+. .. ......++++|++..|..+ .+
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~-----~~--~l~-~~---~~~~~~~~~SPDG~~la~~-~~------ 171 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAA-----VR--QLT-HG---EGFATDAKLSPKGGFVSFI-RG------ 171 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTS-----CC--BCC-CS---SSCEEEEEECTTSSEEEEE-ET------
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcce-----EE--Ecc-cC---CcccccccCCCCCCEEEEE-eC------
Confidence 368899999998777743 89999996544 3 11 121 11 1256789999844444443 33
Q ss_pred ceEEEEECCCCeEEEEeecCCCc-----------cCCCCCCceeECCCCc-EEEEeCCC---------------------
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKS-----------EEKSTADDIAVDAEGN-AYVTDVVS--------------------- 174 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~-----------~~~~~p~~~~vd~~G~-lyV~d~~~--------------------- 174 (335)
..|+++|.++++........... +++..+..++++|||+ ++++....
T Consensus 172 ~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~ 251 (741)
T 2ecf_A 172 RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQ 251 (741)
T ss_dssp TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEE
T ss_pred CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEe
Confidence 25999999988765322111000 0012357899999996 66653221
Q ss_pred -----------CeEEEEccCC-cEEEEecCCccccccccccccccCeEEEccCC-eEEEEEC----CCCEEEEEeCCCCc
Q 039428 175 -----------SKIWKVGVEG-QLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHM----CSGNLFKIDIRKEE 237 (335)
Q Consensus 175 -----------~~I~~~d~~g-~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~----~~~~v~~~d~~~~~ 237 (335)
..|+.+|.++ .....+... . ........+++ ||| .|+++.. ...+|+++|+.+++
T Consensus 252 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~---~----~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~ 323 (741)
T 2ecf_A 252 RYPAAGDANVQVKLGVISPAEQAQTQWIDLG---K----EQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ 323 (741)
T ss_dssp ECCBTTSCCCEEEEEEECSSTTCCCEEECCC---S----CSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC
T ss_pred ecCCCCCCCCeeEEEEEECCCCCceEEecCC---C----CcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc
Confidence 1788888765 443322110 0 01223678999 999 6776543 24689999998873
Q ss_pred eeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCC--eEEEEE
Q 039428 238 EEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYP--SARLVE 279 (335)
Q Consensus 238 ~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~--~~~v~~ 279 (335)
....+.............+++.++|+++++....+ .++.++
T Consensus 324 -~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 324 -QRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp -EEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEEC
T ss_pred -eEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEc
Confidence 33333322211011235789999998666644333 444444
No 205
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.55 E-value=3.9e-05 Score=70.36 Aligned_cols=206 Identities=11% Similarity=0.063 Sum_probs=115.3
Q ss_pred eeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEe-cCC--------
Q 039428 53 TAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFT-DVL-------- 123 (335)
Q Consensus 53 gia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~-D~~-------- 123 (335)
+++|+|+|+.+++...++.|+++|..+++ .. .+...+... .......+++ +++++++.. +..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~-----~~--~~~~~~~~~-~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~ 155 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLE-----EN--VVYQVPAEW-VGYGTWVANS-DCTKLVGIEIRREDWVPLTDW 155 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCC-----EE--EEEECCTTE-EEEEEEEECT-TSSEEEEEEEEGGGCCCCCSH
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCc-----ce--eeeechhhc-ccccceeECC-CCCeeccccccCccccccccc
Confidence 67999999988777667899999965444 11 233333210 0011223465 566655321 000
Q ss_pred --------CCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC-CCc-E-EEEeCC----CCeEEEEccCCcEEE
Q 039428 124 --------GNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-EGN-A-YVTDVV----SSKIWKVGVEGQLLS 188 (335)
Q Consensus 124 --------~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-~G~-l-yV~d~~----~~~I~~~d~~g~~~~ 188 (335)
......|+++|+++++....... .....+++++| ||+ + |+++.. ..+|+.++.+++..+
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~ 229 (388)
T 3pe7_A 156 KKFHEFYFTKPCCRLMRVDLKTGESTVILQE------NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR 229 (388)
T ss_dssp HHHHHHGGGCCCEEEEEEETTTCCEEEEEEE------SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE
T ss_pred chhhhhhccCCcceEEEEECCCCceEEeecC------CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE
Confidence 01115799999998876543322 23456789999 886 4 444322 458999998876544
Q ss_pred EecCCccccccccccccccCeEEEccCC-eE-EEEECCCC---EEEEEeCCCCceeEEEE-eccCC-cCCCCCCeEEEcC
Q 039428 189 IIRSPLFTAKEWYKNVFGLNGIVYHPDG-FL-IVIHMCSG---NLFKIDIRKEEEEVKLI-ELRGG-SSLSLGDGLALLS 261 (335)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~L-yvad~~~~---~v~~~d~~~~~~~~~~~-~~~g~-~~~~~pdGia~d~ 261 (335)
.+.... .......++++||| .| |+++.... +|+++|+++++ .+.+ ...+. .....++++++.+
T Consensus 230 ~l~~~~--------~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~--~~~l~~~~~~~~~~~~~~~~~~sp 299 (388)
T 3pe7_A 230 KVKTHA--------EGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLE--NRQLTSMPACSHLMSNYDGSLMVG 299 (388)
T ss_dssp ESCCCC--------TTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCC--EEEEEEECCEEEEEECTTSSEEEE
T ss_pred EeeeCC--------CCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCc--eEEEEcCCCceeeeecCCCCeEcc
Confidence 321100 00124467899999 56 55554333 49999999873 3333 22210 0012367888888
Q ss_pred CCc-EEEEe--------cCCCeEEEEEcCCC
Q 039428 262 PTK-LVVAG--------NPYPSARLVESSDG 283 (335)
Q Consensus 262 ~g~-l~va~--------~~~~~~~v~~~~~~ 283 (335)
+|+ |+++. .+...+.+++...+
T Consensus 300 dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (388)
T 3pe7_A 300 DGSDAPVDVQDDSGYKIENDPFLYVFNMKNG 330 (388)
T ss_dssp EECCC------------CCCCEEEEEETTTT
T ss_pred CCCcceeEeeeccccccCCCCEEEEEeccCC
Confidence 885 44331 22346777776544
No 206
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.55 E-value=0.00013 Score=66.27 Aligned_cols=209 Identities=11% Similarity=-0.022 Sum_probs=129.7
Q ss_pred cCCCcceeeeEE-----cC-CCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEE
Q 039428 45 HSPSFLCETAKW-----DD-VGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVA 118 (335)
Q Consensus 45 ~~~~~~pegia~-----d~-~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~ 118 (335)
.+....-.++++ .+ ++++++++..++.|..||..+...... ... ......+.. .....+++++ ++.+.++
T Consensus 18 ~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~-~~~-~~~~l~~h~-~~V~~~~~~~-~~~~l~s 93 (343)
T 2xzm_R 18 EGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY-FGI-PHKALTGHN-HFVSDLALSQ-ENCFAIS 93 (343)
T ss_dssp ECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB-SEE-EEEEECCCS-SCEEEEEECS-STTEEEE
T ss_pred ccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc-ccc-ccchhccCC-CceEEEEECC-CCCEEEE
Confidence 343344578888 66 788877778889999998543220000 000 011111111 2467899997 5655554
Q ss_pred EecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccc
Q 039428 119 FTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAK 198 (335)
Q Consensus 119 ~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~ 198 (335)
.... ..|..||.++++....... . ....+.+++.|+|+..++.+..+.|..+|..++....... ..
T Consensus 94 ~s~D-----~~v~lwd~~~~~~~~~~~~----h-~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~--~~-- 159 (343)
T 2xzm_R 94 SSWD-----KTLRLWDLRTGTTYKRFVG----H-QSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAE--KE-- 159 (343)
T ss_dssp EETT-----SEEEEEETTSSCEEEEEEC----C-CSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCT--TT--
T ss_pred EcCC-----CcEEEEECCCCcEEEEEcC----C-CCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeec--cc--
Confidence 2211 4699999998876533221 1 3456789999999988888888999999987654432110 00
Q ss_pred cccccccccCeEEEccCC----------eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEE
Q 039428 199 EWYKNVFGLNGIVYHPDG----------FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVA 268 (335)
Q Consensus 199 ~~~~~~~~p~Gia~~~dg----------~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va 268 (335)
........++++|++ .++++-..++.|..+|.... ....+.... .....+++.++|+++++
T Consensus 160 ---~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--~~~~~~~h~----~~v~~~~~s~~g~~l~s 230 (343)
T 2xzm_R 160 ---NHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQ--IRYTFKAHE----SNVNHLSISPNGKYIAT 230 (343)
T ss_dssp ---SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTE--EEEEEECCS----SCEEEEEECTTSSEEEE
T ss_pred ---CCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCc--eeEEEcCcc----ccceEEEECCCCCEEEE
Confidence 011235678888875 56777778899999995543 333343221 23578999999988877
Q ss_pred ecCCCeEEEEEc
Q 039428 269 GNPYPSARLVES 280 (335)
Q Consensus 269 ~~~~~~~~v~~~ 280 (335)
....+.+++.+.
T Consensus 231 gs~dg~v~iwd~ 242 (343)
T 2xzm_R 231 GGKDKKLLIWDI 242 (343)
T ss_dssp EETTCEEEEEES
T ss_pred EcCCCeEEEEEC
Confidence 665577888876
No 207
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.55 E-value=5.2e-05 Score=75.70 Aligned_cols=203 Identities=9% Similarity=0.003 Sum_probs=114.5
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
.+.+++|+|+ +.++++ .++.|+.+|..+++ .. .+.... .....++++|++..|.. ..| ..
T Consensus 83 ~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~-----~~--~l~~~~----~~~~~~~~SpdG~~la~-~~~------~~ 142 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLF-TQGGLVGFDMLARK-----VT--YLFDTN----EETASLDFSPVGDRVAY-VRN------HN 142 (706)
T ss_dssp CCEEEEETTT-TEEEEE-ETTEEEEEETTTTE-----EE--EEECCT----TCCTTCEECTTSSEEEE-EET------TE
T ss_pred CceeEEECCC-CeEEEE-ECCEEEEEECCCCc-----eE--EccCCc----ccccCCcCCCCCCEEEE-EEC------Ce
Confidence 4678999999 555554 35899999965443 11 122111 24567899984444444 333 35
Q ss_pred EEEEECCC-----CeEEEEeecCCC---------ccCCCCCCceeECCCCc-EEEEe-----------------------
Q 039428 130 LAAYDLST-----WKRLFLTQLSGK---------SEEKSTADDIAVDAEGN-AYVTD----------------------- 171 (335)
Q Consensus 130 v~~~d~~~-----~~~~~~~~~~~~---------~~~~~~p~~~~vd~~G~-lyV~d----------------------- 171 (335)
|+.+|.++ ++.......... .+.+..+.+++++|||+ ++++.
T Consensus 143 i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 222 (706)
T 2z3z_A 143 LYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKP 222 (706)
T ss_dssp EEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEE
T ss_pred EEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEE
Confidence 99999987 755422111100 01123368999999997 44443
Q ss_pred ---------CCCCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCC----CEEEEEeCCCCc
Q 039428 172 ---------VVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCS----GNLFKIDIRKEE 237 (335)
Q Consensus 172 ---------~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~----~~v~~~d~~~~~ 237 (335)
.....|+++|.++.....+... . .....+..++++||| .|+++.... .+|+.+|+.+++
T Consensus 223 ~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~--~-----~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~ 295 (706)
T 2z3z_A 223 LYYPMAGTPSHHVTVGIYHLATGKTVYLQTG--E-----PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR 295 (706)
T ss_dssp ECCCBTTSCCCEEEEEEEETTTTEEEECCCC--S-----CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC
T ss_pred eeCCCCCCCCCeeEEEEEECCCCceEeeccC--C-----CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc
Confidence 1336788999876654422110 0 011236789999999 577754332 389999998762
Q ss_pred eeEEEEeccCCcCCCCCCeEEEcC--CCcEEEEecCC--CeEEEEE
Q 039428 238 EEVKLIELRGGSSLSLGDGLALLS--PTKLVVAGNPY--PSARLVE 279 (335)
Q Consensus 238 ~~~~~~~~~g~~~~~~pdGia~d~--~g~l~va~~~~--~~~~v~~ 279 (335)
...................+++.+ +|+++++.... ..++.++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 296 FVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp EEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred eeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 122222211111111236789998 88755553322 3444444
No 208
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.53 E-value=2.4e-05 Score=71.77 Aligned_cols=217 Identities=12% Similarity=0.071 Sum_probs=131.7
Q ss_pred cCCCcceeeeEEcC-CCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeec----CCcCCCCcceEEEeCCCCeEEEEE
Q 039428 45 HSPSFLCETAKWDD-VGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKE----DDVVGNATMGIAVDRPRNRLLVAF 119 (335)
Q Consensus 45 ~~~~~~pegia~d~-~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~----~~~~~~~p~Gi~~d~~~g~l~v~~ 119 (335)
.+......+++|+| +++.++++..++.|..||..++..... ......... +.........+++.+.+++++++.
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSY-YTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSC-EEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccce-EeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 33344568999999 999888888899999999654442100 000000000 000113568899987455455542
Q ss_pred ecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC---CCcEEEEeCCCCeEEEEccCCc-EEEEecCCcc
Q 039428 120 TDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA---EGNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLF 195 (335)
Q Consensus 120 ~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~---~G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~ 195 (335)
... +.|..||.++++....... ......+.+.+ ++.++++....+.|..+|.... ....+..
T Consensus 119 ~~d-----~~i~iwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--- 184 (408)
T 4a11_B 119 SFD-----KTLKVWDTNTLQTADVFNF------EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG--- 184 (408)
T ss_dssp ETT-----SEEEEEETTTTEEEEEEEC------SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC---
T ss_pred eCC-----CeEEEeeCCCCccceeccC------CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC---
Confidence 211 3699999999877654443 12344566666 4557777788889999997643 3222211
Q ss_pred ccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccC-----------CcCCCCCCeEEEcCCC
Q 039428 196 TAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRG-----------GSSLSLGDGLALLSPT 263 (335)
Q Consensus 196 ~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g-----------~~~~~~pdGia~d~~g 263 (335)
.......++++|++ +++++-..++.|..+|+...+.....+.... .........+++.++|
T Consensus 185 -------~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 257 (408)
T 4a11_B 185 -------HRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG 257 (408)
T ss_dssp -------CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS
T ss_pred -------CCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCC
Confidence 11236889999998 5787877889999999976521222221100 0001335688999999
Q ss_pred cEEEEecCCCeEEEEEcCCC
Q 039428 264 KLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 264 ~l~va~~~~~~~~v~~~~~~ 283 (335)
.++++....+.+++.+...+
T Consensus 258 ~~l~~~~~dg~i~vwd~~~~ 277 (408)
T 4a11_B 258 LHLLTVGTDNRMRLWNSSNG 277 (408)
T ss_dssp SEEEEEETTSCEEEEETTTC
T ss_pred CEEEEecCCCeEEEEECCCC
Confidence 87766544467888886543
No 209
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.53 E-value=1e-05 Score=72.74 Aligned_cols=232 Identities=8% Similarity=-0.004 Sum_probs=136.1
Q ss_pred cceeeeEEcCCCC-EEEEEecCCeEEEEEC-CCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCc
Q 039428 49 FLCETAKWDDVGR-RFLVSFLDGGVGQVLV-PDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNK 126 (335)
Q Consensus 49 ~~pegia~d~~g~-~~~~~~~~~~I~~~d~-~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~ 126 (335)
....+++|+++++ .++++..++.|..||. .++. .. .+..... ......+++++ ++.++.+..|
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~-----~~---~~~~~~~-~~~v~~l~~~~-~~~l~s~~~d----- 121 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS-----FQ---ALTNNEA-NLGICRICKYG-DDKLIAASWD----- 121 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS-----EE---ECBSCCC-CSCEEEEEEET-TTEEEEEETT-----
T ss_pred CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc-----eE---eccccCC-CCceEEEEeCC-CCEEEEEcCC-----
Confidence 3467899999999 7777788899999985 4443 11 2211001 13567899997 5656554332
Q ss_pred cceEEEEECCC---------CeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC-cE--EEEecCCc
Q 039428 127 YSALAAYDLST---------WKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG-QL--LSIIRSPL 194 (335)
Q Consensus 127 ~~~v~~~d~~~---------~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g-~~--~~~~~~~~ 194 (335)
..|..||.++ ++... .+. ....+..+++++++ +++ ....+.|..+|... .. ......
T Consensus 122 -~~i~iwd~~~~~~~~~~~~~~~~~--~~~----~~~~v~~~~~~~~~-l~~-~~~d~~i~i~d~~~~~~~~~~~~~~-- 190 (342)
T 1yfq_A 122 -GLIEVIDPRNYGDGVIAVKNLNSN--NTK----VKNKIFTMDTNSSR-LIV-GMNNSQVQWFRLPLCEDDNGTIEES-- 190 (342)
T ss_dssp -SEEEEECHHHHTTBCEEEEESCSS--SSS----SCCCEEEEEECSSE-EEE-EESTTEEEEEESSCCTTCCCEEEEC--
T ss_pred -CeEEEEcccccccccccccCCeee--EEe----eCCceEEEEecCCc-EEE-EeCCCeEEEEECCccccccceeeec--
Confidence 3588998765 32211 111 13456789999888 554 46678899999875 21 111100
Q ss_pred cccccccccccccCeEEEcc-CCeEEEEECCCCEEEEEeCCCC------ceeEEEEeccCCc-----CCCCCCeEEEcCC
Q 039428 195 FTAKEWYKNVFGLNGIVYHP-DGFLIVIHMCSGNLFKIDIRKE------EEEVKLIELRGGS-----SLSLGDGLALLSP 262 (335)
Q Consensus 195 ~~~~~~~~~~~~p~Gia~~~-dg~Lyvad~~~~~v~~~d~~~~------~~~~~~~~~~g~~-----~~~~pdGia~d~~ 262 (335)
........++++| ++.++++-..++.|..++.+.. + ....+...... .......+++.++
T Consensus 191 -------~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 262 (342)
T 1yfq_A 191 -------GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSS-KRFAFRCHRLNLKDTNLAYPVNSIEFSPR 262 (342)
T ss_dssp -------SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCT-TCEEEECCCCCTTCCSSCCCEEEEEECTT
T ss_pred -------CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccc-cceeeecccccccccccceeEEEEEEcCC
Confidence 0122478999999 9977777777888887666543 2 33444422100 0113568999999
Q ss_pred CcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEeCCeEE-EEeccCC
Q 039428 263 TKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATVKDGRVY-LSHLLGL 319 (335)
Q Consensus 263 g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~~g~ly-V~~~~~~ 319 (335)
++++++....+.+++.+...+ +....+........++++ .++++. .+...+.
T Consensus 263 ~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~~h~~~v~~~~-~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 263 HKFLYTAGSDGIISCWNLQTR----KKIKNFAKFNEDSVVKIA-CSDNILCLATSDDT 315 (342)
T ss_dssp TCCEEEEETTSCEEEEETTTT----EEEEECCCCSSSEEEEEE-ECSSEEEEEEECTH
T ss_pred CCEEEEecCCceEEEEcCccH----hHhhhhhcccCCCceEec-CCCCeEEEEecCCc
Confidence 886666554467888887654 223333322012234566 655544 4444443
No 210
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.52 E-value=0.00048 Score=61.39 Aligned_cols=211 Identities=9% Similarity=-0.017 Sum_probs=130.7
Q ss_pred EcCCCcceeeeEEcCC-CCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecC
Q 039428 44 YHSPSFLCETAKWDDV-GRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDV 122 (335)
Q Consensus 44 ~~~~~~~pegia~d~~-g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~ 122 (335)
+.+-.-.-.+++|+|+ +++++.+..+++|..||....... ... ......+. ......+++++ +++++++.. .
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~---~~~-~~~~l~~h-~~~V~~~~~s~-dg~~l~s~~-~ 106 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN---YGI-PQRALRGH-SHFVSDVVISS-DGQFALSGS-W 106 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC---SEE-EEEEECCC-SSCEEEEEECT-TSSEEEEEE-T
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc---cce-eeEEEeCC-CCCEEEEEECC-CCCEEEEEc-c
Confidence 4444445689999998 566666688899999985433310 010 01111111 13567899997 565555322 2
Q ss_pred CCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccc
Q 039428 123 LGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYK 202 (335)
Q Consensus 123 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~ 202 (335)
. ..|..++............. ........+.++++.+++.+..+.+..+|..+..........
T Consensus 107 d----~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~-------- 169 (340)
T 4aow_A 107 D----GTLRLWDLTTGTTTRRFVGH-----TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDES-------- 169 (340)
T ss_dssp T----SEEEEEETTTTEEEEEEECC-----SSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSS--------
T ss_pred c----ccceEEeecccceeeeecCC-----CCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEecc--------
Confidence 1 35888998877665332221 234456777888887787778888999988765443221110
Q ss_pred cccccCeEEEccCC--eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEc
Q 039428 203 NVFGLNGIVYHPDG--FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVES 280 (335)
Q Consensus 203 ~~~~p~Gia~~~dg--~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~ 280 (335)
.......+++++++ .++++-...+.|..+|....+ ....+. + . -.....+++.++|+++++....+.+++.+.
T Consensus 170 ~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~-~~~~~~--~-h-~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~ 244 (340)
T 4aow_A 170 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHI--G-H-TGYLNTVTVSPDGSLCASGGKDGQAMLWDL 244 (340)
T ss_dssp CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE-EEEEEC--C-C-SSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred ccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc-eeeEec--C-C-CCcEEEEEECCCCCEEEEEeCCCeEEEEEe
Confidence 11235677888765 566777778889999998873 333332 2 1 123568999999988887655577888877
Q ss_pred CCC
Q 039428 281 SDG 283 (335)
Q Consensus 281 ~~~ 283 (335)
...
T Consensus 245 ~~~ 247 (340)
T 4aow_A 245 NEG 247 (340)
T ss_dssp TTT
T ss_pred ccC
Confidence 654
No 211
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.51 E-value=1.8e-05 Score=72.40 Aligned_cols=197 Identities=12% Similarity=0.138 Sum_probs=112.4
Q ss_pred cCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCC---CC----eEEEEEecCC--CCcc
Q 039428 57 DDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRP---RN----RLLVAFTDVL--GNKY 127 (335)
Q Consensus 57 d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~---~g----~l~v~~~D~~--~~~~ 127 (335)
+|...+++.+...+.|+++|. +|+ ++. .+ +. ..++++.+-+. +| .+|+ .+.. .
T Consensus 37 dp~~s~ii~t~k~~gL~Vydl-~G~----~l~---~~--~~---g~~nnVD~r~~~~l~g~~~dla~a--s~R~~~~--- 98 (355)
T 3amr_A 37 TPQNSKLITTNKKSGLVVYSL-DGK----MLH---SY--NT---GKLNNVDIRYDFPLNGKKVDIAAA--SNRSEGK--- 98 (355)
T ss_dssp CGGGCEEEEEETTTEEEEEET-TSC----EEE---EE--CC---SCEEEEEEEEEEEETTEEEEEEEE--EECSTTC---
T ss_pred CCCccEEEEEcCCCCEEEEcC-CCc----EEE---Ec--cC---CCcccEEEecccccCCceEeEEEE--eCCCCCC---
Confidence 344566555577789999996 676 122 33 21 25566666431 11 2344 3332 2
Q ss_pred ceEEEE--ECCCCeEEEEeecCCC-ccCCCCCCceeE--CCC-Cc--EEEEeCCCCeEEEEcc----CCcEE-EEecCCc
Q 039428 128 SALAAY--DLSTWKRLFLTQLSGK-SEEKSTADDIAV--DAE-GN--AYVTDVVSSKIWKVGV----EGQLL-SIIRSPL 194 (335)
Q Consensus 128 ~~v~~~--d~~~~~~~~~~~~~~~-~~~~~~p~~~~v--d~~-G~--lyV~d~~~~~I~~~d~----~g~~~-~~~~~~~ 194 (335)
++|..| |++++++........+ +.....|.|++. +++ |. +||++.. +++..++. +|+.. +... .
T Consensus 99 n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR--~ 175 (355)
T 3amr_A 99 NTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVR--A 175 (355)
T ss_dssp CEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEE--E
T ss_pred CeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEE--E
Confidence 346555 7777765432121001 122478999999 875 54 7777765 67766443 23221 1111 1
Q ss_pred cccccccccccccCeEEEccC-CeEEEEECCCCEEEEEeCCCCce-eEEEEec-cCCcCCCCCCeEEEc--CC--CcEEE
Q 039428 195 FTAKEWYKNVFGLNGIVYHPD-GFLIVIHMCSGNLFKIDIRKEEE-EVKLIEL-RGGSSLSLGDGLALL--SP--TKLVV 267 (335)
Q Consensus 195 ~~~~~~~~~~~~p~Gia~~~d-g~Lyvad~~~~~v~~~d~~~~~~-~~~~~~~-~g~~~~~~pdGia~d--~~--g~l~v 267 (335)
|.. ...+.|+++|++ |+||+++...+ ||+|+.+...+ ..+.+.. .+......+.||++. ++ |.|++
T Consensus 176 f~l------gsq~EgcvvDd~~g~Lyv~eEd~G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLiv 248 (355)
T 3amr_A 176 FKM------NSQTEGMAADDEYGRLYIAEEDEA-IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMA 248 (355)
T ss_dssp EEC------SSCEEEEEEETTTTEEEEEETTTE-EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEE
T ss_pred ecC------CCCcceEEEcCCCCeEEEecccce-EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEE
Confidence 221 135889999985 49999998866 99999663310 1223322 222222468999995 33 35888
Q ss_pred EecCCCeEEEEEcC
Q 039428 268 AGNPYPSARLVESS 281 (335)
Q Consensus 268 a~~~~~~~~v~~~~ 281 (335)
++.+.+...|++..
T Consensus 249 SsQG~~s~~Vydr~ 262 (355)
T 3amr_A 249 SSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEGGGTEEEEEESS
T ss_pred EcCCCCEEEEEECC
Confidence 87666788888764
No 212
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.51 E-value=3.8e-06 Score=82.21 Aligned_cols=188 Identities=12% Similarity=0.029 Sum_probs=107.4
Q ss_pred ceeeeEEcCCCCEEEEEec---C--CeEEEEECC-CCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCC
Q 039428 50 LCETAKWDDVGRRFLVSFL---D--GGVGQVLVP-DEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVL 123 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~---~--~~I~~~d~~-~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~ 123 (335)
...+++|+|+ +++|++.. . ..|+.++.. ++.. . .+...+ .....++.++.+.+++++...
T Consensus 66 ~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~-----~--~l~~~~-----~~~~~~~s~dg~~~~~~s~~~- 131 (582)
T 3o4h_A 66 SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEE-----Q--RLEAVK-----PMRILSGVDTGEAVVFTGATE- 131 (582)
T ss_dssp EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCC-----E--ECTTSC-----SBEEEEEEECSSCEEEEEECS-
T ss_pred ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcc-----c--cccCCC-----CceeeeeCCCCCeEEEEecCC-
Confidence 4568899998 77776632 2 268888741 3331 1 121111 122345554344444432221
Q ss_pred CCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeC----CCCeEEEEccCCcEEEEecCCcccccc
Q 039428 124 GNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDV----VSSKIWKVGVEGQLLSIIRSPLFTAKE 199 (335)
Q Consensus 124 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~----~~~~I~~~d~~g~~~~~~~~~~~~~~~ 199 (335)
..+..||.++++....... .. +.++++|||+..++-+ ....|+++|.++...+.+...
T Consensus 132 ----~~~~l~d~~~g~~~~l~~~------~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~------ 193 (582)
T 3o4h_A 132 ----DRVALYALDGGGLRELARL------PG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG------ 193 (582)
T ss_dssp ----SCEEEEEEETTEEEEEEEE------SS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS------
T ss_pred ----CCceEEEccCCcEEEeecC------CC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC------
Confidence 2255789988876543322 11 7899999998554322 126799999775443332111
Q ss_pred ccccccccCeEEEccCC-eEEEEECCCC--EEEEEeCCCCceeEEEEeccCCcCCCCCCeEE--------EcCCCcEEEE
Q 039428 200 WYKNVFGLNGIVYHPDG-FLIVIHMCSG--NLFKIDIRKEEEEVKLIELRGGSSLSLGDGLA--------LLSPTKLVVA 268 (335)
Q Consensus 200 ~~~~~~~p~Gia~~~dg-~Lyvad~~~~--~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia--------~d~~g~l~va 268 (335)
....+.++++||| .|+.++ ..+ +|+++|++++ ....+. + . ...+.+++ +.+||.++++
T Consensus 194 ----~~~~~~~~~SpDG~~l~~~~-~~~~~~i~~~d~~~~--~~~~~~--~-~-~~~~~~~~~~~~~~~~~spdg~~~~~ 262 (582)
T 3o4h_A 194 ----EGSFSSASISPGMKVTAGLE-TAREARLVTVDPRDG--SVEDLE--L-P-SKDFSSYRPTAITWLGYLPDGRLAVV 262 (582)
T ss_dssp ----SCEEEEEEECTTSCEEEEEE-CSSCEEEEEECTTTC--CEEECC--C-S-CSHHHHHCCSEEEEEEECTTSCEEEE
T ss_pred ----CCccccceECCCCCEEEEcc-CCCeeEEEEEcCCCC--cEEEcc--C-C-CcChhhhhhccccceeEcCCCcEEEE
Confidence 1125789999999 566444 455 8999999987 334222 2 1 11233455 9999988887
Q ss_pred ecCCCeEEEEEc
Q 039428 269 GNPYPSARLVES 280 (335)
Q Consensus 269 ~~~~~~~~v~~~ 280 (335)
....+.+++...
T Consensus 263 ~~~~g~~~l~~~ 274 (582)
T 3o4h_A 263 ARREGRSAVFID 274 (582)
T ss_dssp EEETTEEEEEET
T ss_pred EEcCCcEEEEEE
Confidence 543456666665
No 213
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.51 E-value=5.9e-05 Score=78.11 Aligned_cols=210 Identities=12% Similarity=0.020 Sum_probs=134.0
Q ss_pred CcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 48 SFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
.....+++|+|+|+++.++..++.|..|+..+.+ . ...... ......+++.+ +..|..+..|
T Consensus 17 ~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~-----~----~~~~~~--~~~V~~l~fsp-g~~L~S~s~D------ 78 (902)
T 2oaj_A 17 SSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVE-----V----VIKLED--RSAIKEMRFVK-GIYLVVINAK------ 78 (902)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSEEEEECSTTCE-----E----EEECSS--CCCEEEEEEET-TTEEEEEETT------
T ss_pred CCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcE-----E----EEEcCC--CCCEEEEEEcC-CCEEEEEECc------
Confidence 3346899999999988888889999999853222 1 111221 13568999997 4434443222
Q ss_pred ceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCcccc--cccccccc
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTA--KEWYKNVF 205 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~--~~~~~~~~ 205 (335)
+.|..||.++++....... ....+.++++|+|+..++....+.|..+|.++.....+..+.+.. ........
T Consensus 79 ~~v~lWd~~~~~~~~~~~~------~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~ 152 (902)
T 2oaj_A 79 DTVYVLSLYSQKVLTTVFV------PGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLS 152 (902)
T ss_dssp CEEEEEETTTCSEEEEEEC------SSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCC
T ss_pred CeEEEEECCCCcEEEEEcC------CCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCC
Confidence 4699999998876643322 234678999999987777788899999998765432111000000 00001123
Q ss_pred ccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEecc---CC-----------cCCCCCCeEEEcCCCcEEEEec
Q 039428 206 GLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELR---GG-----------SSLSLGDGLALLSPTKLVVAGN 270 (335)
Q Consensus 206 ~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~---g~-----------~~~~~pdGia~d~~g~l~va~~ 270 (335)
....++++|++ .++++-..++.| .+|+...+ ....+... +. ..-.....+++.++|.++++..
T Consensus 153 ~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs 230 (902)
T 2oaj_A 153 PIVSIQWNPRDIGTVLISYEYVTL-TYSLVENE-IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH 230 (902)
T ss_dssp CCCEEEEETTEEEEEEEECSSCEE-EEETTTTE-EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE
T ss_pred CeEEEEEccCCCCEEEEEeCCCcE-EEECCCCc-eEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE
Confidence 47899999975 666677788899 99998873 34444321 00 0002256899999998888865
Q ss_pred CCCeEEEEEcCCC
Q 039428 271 PYPSARLVESSDG 283 (335)
Q Consensus 271 ~~~~~~v~~~~~~ 283 (335)
..+.+++.+...+
T Consensus 231 ~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 231 EDNSLVFWDANSG 243 (902)
T ss_dssp TTCCEEEEETTTC
T ss_pred CCCeEEEEECCCC
Confidence 5577888887654
No 214
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.51 E-value=5.2e-06 Score=74.87 Aligned_cols=204 Identities=13% Similarity=0.082 Sum_probs=119.4
Q ss_pred EEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEE----EeCCCCeEEEEEecCCCCccceE
Q 039428 55 KWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIA----VDRPRNRLLVAFTDVLGNKYSAL 130 (335)
Q Consensus 55 a~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~----~d~~~g~l~v~~~D~~~~~~~~v 130 (335)
+|+++++.++++..++.|..||...+..+ +. .+....+........++ +++ +++++++..+. ..|
T Consensus 124 ~~s~~~~~l~~~~~d~~i~vwd~~~~~~~---~~--~~~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d-----~~i 192 (357)
T 3i2n_A 124 GIGEGAPEIVTGSRDGTVKVWDPRQKDDP---VA--NMEPVQGENKRDCWTVAFGNAYNQ-EERVVCAGYDN-----GDI 192 (357)
T ss_dssp GCC-CCCEEEEEETTSCEEEECTTSCSSC---SE--EECCCTTSCCCCEEEEEEECCCC--CCCEEEEEETT-----SEE
T ss_pred ccCCCccEEEEEeCCCeEEEEeCCCCCCc---ce--eccccCCCCCCceEEEEEEeccCC-CCCEEEEEccC-----CeE
Confidence 45788988888888999999986544311 11 12111111112345566 455 45555543221 369
Q ss_pred EEEECCCCeEEEEeecCCCccCCCCCCceeECC---CCcEEEEeCCCCeEEEEccCCcEEEEecCCcccccccccccccc
Q 039428 131 AAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA---EGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGL 207 (335)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~---~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p 207 (335)
..||.++++....... ......++++| +++.+++....+.|..+|....... ..+............
T Consensus 193 ~i~d~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~~~~~~v 262 (357)
T 3i2n_A 193 KLFDLRNMALRWETNI------KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPT----KGFASVSEKAHKSTV 262 (357)
T ss_dssp EEEETTTTEEEEEEEC------SSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETT----TEEEEEEEECCSSCE
T ss_pred EEEECccCceeeecCC------CCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcc----cceeeeccCCCcCCE
Confidence 9999999877543322 34567899999 8887777788899999987532210 000000000122347
Q ss_pred CeEEEccCCe-EEEEECCCCEEEEEeCCCCcee---------------EEEE-eccCCcCCCCCCeEEEcCCCcEEE-Ee
Q 039428 208 NGIVYHPDGF-LIVIHMCSGNLFKIDIRKEEEE---------------VKLI-ELRGGSSLSLGDGLALLSPTKLVV-AG 269 (335)
Q Consensus 208 ~Gia~~~dg~-Lyvad~~~~~v~~~d~~~~~~~---------------~~~~-~~~g~~~~~~pdGia~d~~g~l~v-a~ 269 (335)
..++++|++. ++++-..++.|..+|+...... ...+ ...+ . -.....+++.++|.+++ +.
T Consensus 263 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~-~~~v~~~~~s~~~~~l~~s~ 340 (357)
T 3i2n_A 263 WQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL-S-TQPISSLDWSPDKRGLCVCS 340 (357)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC-C-SSCEEEEEECSSSTTEEEEE
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecccc-C-CCCeeEEEEcCCCCeEEEEe
Confidence 8899999995 7888888898888887653101 0111 1112 1 12357899999986554 54
Q ss_pred cCCCeEEEEEcC
Q 039428 270 NPYPSARLVESS 281 (335)
Q Consensus 270 ~~~~~~~v~~~~ 281 (335)
...+.+++.+..
T Consensus 341 ~~d~~i~iw~~~ 352 (357)
T 3i2n_A 341 SFDQTVRVLIVT 352 (357)
T ss_dssp ETTSEEEEEEEC
T ss_pred cCCCcEEEEECC
Confidence 444677777653
No 215
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.51 E-value=1.4e-05 Score=75.58 Aligned_cols=164 Identities=10% Similarity=0.041 Sum_probs=101.6
Q ss_pred CcceEEEeCCCCeEEEEEecCCCCccceEEEEECC--CCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEE
Q 039428 102 ATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLS--TWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWK 179 (335)
Q Consensus 102 ~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~--~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~ 179 (335)
....+++++++..|+++. ... +.|..||.. +++........ .. ...++.++++|+|+.+++....+.|+.
T Consensus 104 ~v~~~~~s~d~~~l~~~~-~~d----g~v~iwd~~~~~~~~~~~~~~~--~~-~~~v~~~~~sp~~~~l~~~~~~g~v~~ 175 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACA-DSD----KSLLVFDVDKTSKNVLKLRKRF--CF-SKRPNAISIAEDDTTVIIADKFGDVYS 175 (450)
T ss_dssp CEEEEEECTTSSEEEEEE-GGG----TEEEEEEECSSSSSCEEEEEEE--EC-SSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ceEEEEEcCCCCEEEEEE-CCC----CeEEEEECcCCCCceeeeeecc--cC-CCCceEEEEcCCCCEEEEEeCCCcEEE
Confidence 367899998444444543 221 358889987 66544222110 01 345678999999986666667889999
Q ss_pred EccCCcEEEEecCCccccccccccccccCeEEEccC---CeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCe
Q 039428 180 VGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPD---GFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDG 256 (335)
Q Consensus 180 ~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~d---g~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdG 256 (335)
++.............+. ......+.++++|+ +.++++-..++.|..+|+..++ ....+. .+ . ......
T Consensus 176 ~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~-~~~~~~-~~-h-~~~v~~ 246 (450)
T 2vdu_B 176 IDINSIPEEKFTQEPIL-----GHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF-IVDKWL-FG-H-KHFVSS 246 (450)
T ss_dssp EETTSCCCSSCCCCCSE-----ECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT-CEEEEC-CC-C-SSCEEE
T ss_pred EecCCcccccccceeee-----cccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc-eeeeee-cC-C-CCceEE
Confidence 98653221100000111 11234788999999 8666666678889999988763 343332 12 1 234678
Q ss_pred EEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 257 LALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 257 ia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
+++. +|.++++....+.+++.+...+
T Consensus 247 ~~~s-d~~~l~s~~~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 247 ICCG-KDYLLLSAGGDDKIFAWDWKTG 272 (450)
T ss_dssp EEEC-STTEEEEEESSSEEEEEETTTC
T ss_pred EEEC-CCCEEEEEeCCCeEEEEECCCC
Confidence 9999 8887777555578888887655
No 216
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.50 E-value=2.8e-05 Score=71.58 Aligned_cols=215 Identities=12% Similarity=0.089 Sum_probs=117.1
Q ss_pred CEEEEEecCCeEEEEECCCCCCCcceeeeeEEee-cCC--cCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCC
Q 039428 61 RRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVK-EDD--VVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLST 137 (335)
Q Consensus 61 ~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~-~~~--~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~ 137 (335)
+.+|+...++.|+.+|..+|+. + |.. .+. ..........++ ++.+|+...+ ..|+.+|+++
T Consensus 144 ~~v~v~~~~g~l~~~d~~tG~~----~----W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~------g~l~~~d~~t 207 (376)
T 3q7m_A 144 GLVLIHTSNGQLQALNEADGAV----K----WTVNLDMPSLSLRGESAPTTA--FGAAVVGGDN------GRVSAVLMEQ 207 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCE----E----EEEECCC-----CCCCCCEEE--TTEEEECCTT------TEEEEEETTT
T ss_pred CEEEEEcCCCeEEEEECCCCcE----E----EEEeCCCCceeecCCCCcEEE--CCEEEEEcCC------CEEEEEECCC
Confidence 3556665678999999766651 1 211 111 000011334454 5889984221 3599999999
Q ss_pred CeEEEEeecCCCccC--CC----CCCceeECCCCcEEEEeCCCCeEEEEccC-CcEEEEecCCccccccccccccccCeE
Q 039428 138 WKRLFLTQLSGKSEE--KS----TADDIAVDAEGNAYVTDVVSSKIWKVGVE-GQLLSIIRSPLFTAKEWYKNVFGLNGI 210 (335)
Q Consensus 138 ~~~~~~~~~~~~~~~--~~----~p~~~~vd~~G~lyV~d~~~~~I~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~p~Gi 210 (335)
|+..+......+... .. ......+ .+|++|++. ..+.|+.+|++ |+...... . ....++
T Consensus 208 G~~~w~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~v~~~~-~~g~l~~~d~~tG~~~w~~~---~---------~~~~~~ 273 (376)
T 3q7m_A 208 GQMIWQQRISQATGSTEIDRLSDVDTTPVV-VNGVVFALA-YNGNLTALDLRSGQIMWKRE---L---------GSVNDF 273 (376)
T ss_dssp CCEEEEEECCC-----------CCCCCCEE-ETTEEEEEC-TTSCEEEEETTTCCEEEEEC---C---------CCEEEE
T ss_pred CcEEEEEecccCCCCcccccccccCCCcEE-ECCEEEEEe-cCcEEEEEECCCCcEEeecc---C---------CCCCCc
Confidence 988876654321100 00 0011122 357899874 56789999985 55543211 0 123456
Q ss_pred EEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEe
Q 039428 211 VYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETASVV 290 (335)
Q Consensus 211 a~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~ 290 (335)
+++ +++||++.. ++.|+.+|+++++ ........+.. ......+. ++.+|+... .+.+.+++..++- ..
T Consensus 274 ~~~-~~~l~~~~~-~g~l~~~d~~tG~-~~w~~~~~~~~---~~~~~~~~-~~~l~v~~~-~g~l~~~d~~tG~----~~ 341 (376)
T 3q7m_A 274 IVD-GNRIYLVDQ-NDRVMALTIDGGV-TLWTQSDLLHR---LLTSPVLY-NGNLVVGDS-EGYLHWINVEDGR----FV 341 (376)
T ss_dssp EEE-TTEEEEEET-TCCEEEEETTTCC-EEEEECTTTTS---CCCCCEEE-TTEEEEECT-TSEEEEEETTTCC----EE
T ss_pred eEE-CCEEEEEcC-CCeEEEEECCCCc-EEEeecccCCC---cccCCEEE-CCEEEEEeC-CCeEEEEECCCCc----EE
Confidence 665 779999874 6679999998874 32223211111 12233443 578999865 2568888876652 22
Q ss_pred eeecCCCCCcceEEEEeCCeEEEEecc
Q 039428 291 AKFNGPTHRVATAATVKDGRVYLSHLL 317 (335)
Q Consensus 291 ~~~~~p~~~~Pt~va~~~g~lyV~~~~ 317 (335)
..+..+.........+.+++|||....
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~l~v~~~~ 368 (376)
T 3q7m_A 342 AQQKVDSSGFQTEPVAADGKLLIQAKD 368 (376)
T ss_dssp EEEECCTTCBCSCCEEETTEEEEEBTT
T ss_pred EEEecCCCcceeCCEEECCEEEEEeCC
Confidence 222221111112344568999996543
No 217
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.48 E-value=1.7e-05 Score=79.69 Aligned_cols=189 Identities=5% Similarity=0.064 Sum_probs=110.8
Q ss_pred eeeeEEcCCCCEEEEE-ecCC--------------------------------eEEEEECCC-CCCCcceeeeeEEeecC
Q 039428 51 CETAKWDDVGRRFLVS-FLDG--------------------------------GVGQVLVPD-EYSPGTVLEEVKLVKED 96 (335)
Q Consensus 51 pegia~d~~g~~~~~~-~~~~--------------------------------~I~~~d~~~-g~~~~~v~~~~~~~~~~ 96 (335)
+.+++|+|+|+.+++. ...+ +|+.+|..+ ++ .. .+...
T Consensus 211 ~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~-----~~---~~~~~ 282 (741)
T 2ecf_A 211 HTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQ-----TQ---WIDLG 282 (741)
T ss_dssp CCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCC-----CE---EECCC
T ss_pred ccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCc-----eE---EecCC
Confidence 4679999999976666 3221 788888644 43 11 11111
Q ss_pred CcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCC--
Q 039428 97 DVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVS-- 174 (335)
Q Consensus 97 ~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~-- 174 (335)
.........+++ +++..|++...+.... ...|+.+|.++++............ ....+.+++.+||+++++....
T Consensus 283 ~~~~~~~~~~~~-pDg~~l~~~~~~~~~~-~~~i~~~d~~~g~~~~~~~~~~~~~-~~~~~~~~~spdg~~~~~~~~~g~ 359 (741)
T 2ecf_A 283 KEQDIYLARVNW-RDPQHLSFQRQSRDQK-KLDLVEVTLASNQQRVLAHETSPTW-VPLHNSLRFLDDGSILWSSERTGF 359 (741)
T ss_dssp SCSSEEEEEEEE-EETTEEEEEEEETTSS-EEEEEEEETTTCCEEEEEEEECSSC-CCCCSCCEECTTSCEEEEECTTSS
T ss_pred CCcceEEEEEEe-CCCCEEEEEEecccCC-eEEEEEEECCCCceEEEEEcCCCCc-CCcCCceEECCCCeEEEEecCCCc
Confidence 001124567888 8556666654333222 2579999999887653332211100 1134689999999876665443
Q ss_pred CeEEEEccCCcEEEEecCCccccccccccccccCeE-EEccCC-eEEEEECCC----CEEEEEeCCCCceeEEEEeccCC
Q 039428 175 SKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGI-VYHPDG-FLIVIHMCS----GNLFKIDIRKEEEEVKLIELRGG 248 (335)
Q Consensus 175 ~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gi-a~~~dg-~Lyvad~~~----~~v~~~d~~~~~~~~~~~~~~g~ 248 (335)
..||+++.+++ ...+... ......+ +++||| .||++.... .+||+++.++. ..+.+...
T Consensus 360 ~~l~~~~~~~~-~~~l~~~----------~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~--~~~~l~~~-- 424 (741)
T 2ecf_A 360 QHLYRIDSKGK-AAALTHG----------NWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGG--QPQRLSKA-- 424 (741)
T ss_dssp CEEEEECSSSC-EEESCCS----------SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCC--CCEECCCS--
T ss_pred cEEEEEcCCCC-eeeeeec----------ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCC--CeeecccC--
Confidence 48999998877 4432211 1123455 599999 677666543 36888887665 33444321
Q ss_pred cCCCCCCeEEEcCCCcEEEE
Q 039428 249 SSLSLGDGLALLSPTKLVVA 268 (335)
Q Consensus 249 ~~~~~pdGia~d~~g~l~va 268 (335)
.....+++.++|+.++.
T Consensus 425 ---~~~~~~~~spdg~~l~~ 441 (741)
T 2ecf_A 425 ---PGMHSASFARNASVYVD 441 (741)
T ss_dssp ---CSEEEEEECTTSSEEEE
T ss_pred ---CCceEEEECCCCCEEEE
Confidence 12347888999864444
No 218
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.47 E-value=2.7e-05 Score=70.64 Aligned_cols=209 Identities=7% Similarity=-0.034 Sum_probs=123.8
Q ss_pred cceeeeEEcCC--CCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCC-CeEEEEEecCCCC
Q 039428 49 FLCETAKWDDV--GRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPR-NRLLVAFTDVLGN 125 (335)
Q Consensus 49 ~~pegia~d~~--g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~-g~l~v~~~D~~~~ 125 (335)
....+++|.++ ++.+++...++.|..||..+++ ... ....... ......+++++.. +.++++....
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----~~~--~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~d--- 124 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR-----WSQ--IAVHAVH-SASVNSVQWAPHEYGPLLLVASSD--- 124 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTE-----EEE--EEEECCC-SSCEEEEEECCGGGCSEEEEEETT---
T ss_pred CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCc-----eeE--eeeecCC-CcceEEEEeCCCCCCCEEEEecCC---
Confidence 34578899877 8888877888999999864443 111 1111111 1356889999741 5444432221
Q ss_pred ccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC-------------CCcEEEEeCCCCeEEEEccCCc--EEEEe
Q 039428 126 KYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-------------EGNAYVTDVVSSKIWKVGVEGQ--LLSII 190 (335)
Q Consensus 126 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-------------~G~lyV~d~~~~~I~~~d~~g~--~~~~~ 190 (335)
..|..||..++.......+.. . ....+.+++.| +++.+++.+..+.|..+|.... .....
T Consensus 125 --~~i~v~d~~~~~~~~~~~~~~--~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 199 (379)
T 3jrp_A 125 --GKVSVVEFKENGTTSPIIIDA--H-AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 199 (379)
T ss_dssp --SEEEEEECCTTSCCCEEEEEC--C-TTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred --CcEEEEecCCCCceeeEEecC--C-CCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeE
Confidence 369999998763221111111 1 23456788888 6888888888889999886532 11111
Q ss_pred cCCccccccccccccccCeEEEccC---CeEEEEECCCCEEEEEeCCCCce-eEEEEeccCCcCCCCCCeEEEcCCCcEE
Q 039428 191 RSPLFTAKEWYKNVFGLNGIVYHPD---GFLIVIHMCSGNLFKIDIRKEEE-EVKLIELRGGSSLSLGDGLALLSPTKLV 266 (335)
Q Consensus 191 ~~~~~~~~~~~~~~~~p~Gia~~~d---g~Lyvad~~~~~v~~~d~~~~~~-~~~~~~~~g~~~~~~pdGia~d~~g~l~ 266 (335)
. .+.. .......++++|+ +.++++-..++.|..+|...... ....+...... ......+++.++|.++
T Consensus 200 ~--~~~~-----h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l 271 (379)
T 3jrp_A 200 S--TLEG-----HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKF-PDVLWRASWSLSGNVL 271 (379)
T ss_dssp E--EECC-----CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCC-SSCEEEEEECSSSCCE
T ss_pred E--EEec-----ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccC-CCcEEEEEEcCCCCEE
Confidence 0 1110 1123779999999 87777777888888888876521 12222111101 2335688999999766
Q ss_pred EEecCCCeEEEEEcC
Q 039428 267 VAGNPYPSARLVESS 281 (335)
Q Consensus 267 va~~~~~~~~v~~~~ 281 (335)
++....+.+++.+..
T Consensus 272 ~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 272 ALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEEESSSSEEEEEEE
T ss_pred EEecCCCcEEEEeCC
Confidence 664434667777765
No 219
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.46 E-value=5e-05 Score=69.17 Aligned_cols=207 Identities=10% Similarity=0.051 Sum_probs=121.7
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
...+++|+|+|+.+++...++.|..|+...+. .+....+ .+.. .....++++| +++++++.... ..
T Consensus 63 ~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~-----~~~~~~~--~~h~-~~v~~v~~sp-~~~~l~s~s~D-----~~ 128 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASASFDATTCIWKKNQDD-----FECVTTL--EGHE-NEVKSVAWAP-SGNLLATCSRD-----KS 128 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEECCC------EEEEEEE--CCCS-SCEEEEEECT-TSSEEEEEETT-----SC
T ss_pred cEEEEEECCCCCEEEEEECCCcEEEEEccCCC-----eEEEEEc--cCCC-CCceEEEEeC-CCCEEEEEECC-----Ce
Confidence 45789999999988888888999888754332 1111112 2111 3568999998 56555542221 35
Q ss_pred EEEEECCCCeE-EEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccC
Q 039428 130 LAAYDLSTWKR-LFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 130 v~~~d~~~~~~-~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~ 208 (335)
|..||.+++.. .....+... ....+.+++.|+|+++++.+..+.|..++.......... .+.. ......
T Consensus 129 v~iwd~~~~~~~~~~~~~~~h---~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~--~~~~-----h~~~v~ 198 (345)
T 3fm0_A 129 VWVWEVDEEDEYECVSVLNSH---TQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCA--TLEG-----HESTVW 198 (345)
T ss_dssp EEEEEECTTSCEEEEEEECCC---CSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEE--EECC-----CSSCEE
T ss_pred EEEEECCCCCCeEEEEEecCc---CCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEE--EecC-----CCCceE
Confidence 88999876532 211222111 244577999999998888888888888886543211100 0110 112378
Q ss_pred eEEEccCCeEEEEECCCCEEEEEeCCCC---c--------eeEEEE-eccCCcCCCCCCeEEEcCCCcEEEEecCCCeEE
Q 039428 209 GIVYHPDGFLIVIHMCSGNLFKIDIRKE---E--------EEVKLI-ELRGGSSLSLGDGLALLSPTKLVVAGNPYPSAR 276 (335)
Q Consensus 209 Gia~~~dg~Lyvad~~~~~v~~~d~~~~---~--------~~~~~~-~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~ 276 (335)
.++++|+|.++++-..++.|...+.... . .....+ ...+.. -.....+++.+++..+++....+.++
T Consensus 199 ~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~~~d~~i~ 277 (345)
T 3fm0_A 199 SLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFH-SRTIYDIAWCQLTGALATACGDDAIR 277 (345)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSC-SSCEEEEEECTTTCCEEEEETTSCEE
T ss_pred EEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCC-CCcEEEEEEecCCCEEEEEeCCCeEE
Confidence 9999999977777777777766664221 0 011111 111211 12356788888887666644456788
Q ss_pred EEEcC
Q 039428 277 LVESS 281 (335)
Q Consensus 277 v~~~~ 281 (335)
+.+..
T Consensus 278 vw~~~ 282 (345)
T 3fm0_A 278 VFQED 282 (345)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 77654
No 220
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.46 E-value=0.00025 Score=62.81 Aligned_cols=210 Identities=11% Similarity=0.082 Sum_probs=123.5
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCC-CCeEEEEEecCCCCcc
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRP-RNRLLVAFTDVLGNKY 127 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~-~g~l~v~~~D~~~~~~ 127 (335)
....+++|+++++.++++..++.|..||..++... ......+.... .....+++.+. +++++++....
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~~~---~~v~~~~~~~~~d~~~l~s~~~d----- 80 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN---WELSDSWRAHD---SSIVAIDWASPEYGRIIASASYD----- 80 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC---EEEEEEEECCS---SCEEEEEECCGGGCSEEEEEETT-----
T ss_pred cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc---ceecceeccCC---CcEEEEEEcCCCCCCEEEEEcCC-----
Confidence 34678999999998888888899999986433310 11001111111 35688999863 25554432211
Q ss_pred ceEEEEECCCCe---------EEEEeecCCCccCCCCCCceeECCC--CcEEEEeCCCCeEEEEccCCcE-EEEe-----
Q 039428 128 SALAAYDLSTWK---------RLFLTQLSGKSEEKSTADDIAVDAE--GNAYVTDVVSSKIWKVGVEGQL-LSII----- 190 (335)
Q Consensus 128 ~~v~~~d~~~~~---------~~~~~~~~~~~~~~~~p~~~~vd~~--G~lyV~d~~~~~I~~~d~~g~~-~~~~----- 190 (335)
+.|..||.++++ .... +... ......+++.++ ++.+++....+.|..+|..... ...+
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~--~~~~---~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~ 155 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCT--LNDS---KGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSE 155 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEE--ECCC---SSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEE
T ss_pred CeEEEEecCCCcccccccCcceeee--eccc---CCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccc
Confidence 358999987752 2222 2111 345678999999 9888887888999999965321 1100
Q ss_pred -cCCccccccccccccccCeEEEccC---CeEEEEECCCCEEEEEeCCCCceeEE-EEeccCCcCCCCCCeEEEcCCC--
Q 039428 191 -RSPLFTAKEWYKNVFGLNGIVYHPD---GFLIVIHMCSGNLFKIDIRKEEEEVK-LIELRGGSSLSLGDGLALLSPT-- 263 (335)
Q Consensus 191 -~~~~~~~~~~~~~~~~p~Gia~~~d---g~Lyvad~~~~~v~~~d~~~~~~~~~-~~~~~g~~~~~~pdGia~d~~g-- 263 (335)
....+. ..........++++|+ +.++++-..++.+...+...+ ... .....+ . -.....+++.+++
T Consensus 156 ~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~-h-~~~i~~~~~~p~~~~ 228 (351)
T 3f3f_A 156 MKVLSIP---PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDG--KLHVAAKLPG-H-KSLIRSISWAPSIGR 228 (351)
T ss_dssp EESCSCC---CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTS--CEEEEEECCC-C-CSCEEEEEECCCSSC
T ss_pred ccccccc---cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCC--ceeeeeecCC-C-CcceeEEEECCCCCC
Confidence 000000 0112345788999997 655555556666655555544 322 222222 2 1335789999997
Q ss_pred --cEEEEecCCCeEEEEEcC
Q 039428 264 --KLVVAGNPYPSARLVESS 281 (335)
Q Consensus 264 --~l~va~~~~~~~~v~~~~ 281 (335)
+++++....+.+++.+..
T Consensus 229 ~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 229 WYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp SSEEEEEEETTSCEEEEEEE
T ss_pred cceEEEEEcCCCeEEEEeCC
Confidence 677775545667777654
No 221
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.46 E-value=0.00029 Score=68.29 Aligned_cols=213 Identities=13% Similarity=0.017 Sum_probs=131.0
Q ss_pred EEcCCCcc-eeeeEEcC--CCCEEEEEecCCeEEEEECCCC------CCCcceeeeeEEeecCCcCCCCcceEEEeCCCC
Q 039428 43 QYHSPSFL-CETAKWDD--VGRRFLVSFLDGGVGQVLVPDE------YSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRN 113 (335)
Q Consensus 43 ~~~~~~~~-pegia~d~--~g~~~~~~~~~~~I~~~d~~~g------~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g 113 (335)
.+.+.... ..+++|+| ++++++++..++.|..||..++ .. +... .+... ......+++++ ++
T Consensus 58 ~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~--~~~~---~~~~~---~~~v~~~~~s~-~~ 128 (615)
T 1pgu_A 58 QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEV--NVKS---EFQVL---AGPISDISWDF-EG 128 (615)
T ss_dssp EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEE--EEEE---EEECC---SSCEEEEEECT-TS
T ss_pred EEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccc--cccc---hhhcc---cccEEEEEEeC-CC
Confidence 34443444 68999999 9998888878899999985333 10 0011 11111 13568999998 45
Q ss_pred eEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCCcE-EEEec
Q 039428 114 RLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEGQL-LSIIR 191 (335)
Q Consensus 114 ~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g~~-~~~~~ 191 (335)
+.+++..+... ....|+.|| .++.... +... ....+.+++.++|. ++++.+..+.|..+|..... ...+.
T Consensus 129 ~~l~~~~~~~~-~~~~v~~~d--~~~~~~~--~~~~---~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~ 200 (615)
T 1pgu_A 129 RRLCVVGEGRD-NFGVFISWD--SGNSLGE--VSGH---SQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR 200 (615)
T ss_dssp SEEEEEECCSS-CSEEEEETT--TCCEEEE--CCSC---SSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEEC
T ss_pred CEEEEeccCCC-CccEEEEEE--CCCccee--eecC---CccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeec
Confidence 44443332211 113577777 4444322 2111 34667899999996 78888888999999977543 33221
Q ss_pred CCccccccccccccccCeEEEccC-CeEEEEECCCCEEEEEeCCCCceeEEEEecc--CCcCCCCCCeEEEcCCCcEEEE
Q 039428 192 SPLFTAKEWYKNVFGLNGIVYHPD-GFLIVIHMCSGNLFKIDIRKEEEEVKLIELR--GGSSLSLGDGLALLSPTKLVVA 268 (335)
Q Consensus 192 ~~~~~~~~~~~~~~~p~Gia~~~d-g~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~--g~~~~~~pdGia~d~~g~l~va 268 (335)
.. .. .......++++|+ +.++++-..++.|..+|+..++ ....+... + . -.....+++. ++.++++
T Consensus 201 ~~--~~-----~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~-~-~~~v~~~~~~-~~~~l~~ 269 (615)
T 1pgu_A 201 TH--HK-----QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE-FLKYIEDDQEP-V-QGGIFALSWL-DSQKFAT 269 (615)
T ss_dssp SS--SC-----TTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC-EEEECCBTTBC-C-CSCEEEEEES-SSSEEEE
T ss_pred cc--CC-----CCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC-EeEEecccccc-c-CCceEEEEEc-CCCEEEE
Confidence 10 00 0013678999999 8776666678899999988764 44444110 1 1 1335788998 8877777
Q ss_pred ecCCCeEEEEEcCCC
Q 039428 269 GNPYPSARLVESSDG 283 (335)
Q Consensus 269 ~~~~~~~~v~~~~~~ 283 (335)
....+.+++.+...+
T Consensus 270 ~~~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 270 VGADATIRVWDVTTS 284 (615)
T ss_dssp EETTSEEEEEETTTT
T ss_pred EcCCCcEEEEECCCC
Confidence 554477888887654
No 222
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.42 E-value=6.4e-05 Score=74.41 Aligned_cols=204 Identities=14% Similarity=0.071 Sum_probs=114.8
Q ss_pred eeEEc--CCCCE-EEEE-ecCCeEEEEECC--C-CCCCcceeeeeEEeecCCc-CCCCcceEEEeCCCCeEEEEEecCC-
Q 039428 53 TAKWD--DVGRR-FLVS-FLDGGVGQVLVP--D-EYSPGTVLEEVKLVKEDDV-VGNATMGIAVDRPRNRLLVAFTDVL- 123 (335)
Q Consensus 53 gia~d--~~g~~-~~~~-~~~~~I~~~d~~--~-g~~~~~v~~~~~~~~~~~~-~~~~p~Gi~~d~~~g~l~v~~~D~~- 123 (335)
.++|. |+|+. ++.+ ..+.+|+.++.. + +. .. ++...+.. .......++++|++..|+.+..|..
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-----~~--~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~ 153 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-----PR--PLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTG 153 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-----CE--ECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECS
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-----CE--eccCCccCCCCccccCcEECCCCCEEEEEEecccC
Confidence 45565 88887 5555 446789999853 1 33 11 12111100 1124578899986566766544411
Q ss_pred ---CCccceEEEEECCC------CeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCC-------CCeEEEEccCC-c
Q 039428 124 ---GNKYSALAAYDLST------WKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVV-------SSKIWKVGVEG-Q 185 (335)
Q Consensus 124 ---~~~~~~v~~~d~~~------~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~-------~~~I~~~d~~g-~ 185 (335)
......|+++|.++ ++...... . .......++++|||+ |+++... ...|+.+|.++ .
T Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~--~---~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g 228 (662)
T 3azo_A 154 EGPSDVRRFLAAVPLDGSAAADRSAVRELSD--D---AHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDG 228 (662)
T ss_dssp SSTTCEEEEEEEEETTSTTTTCGGGSEESSC--S---CSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTS
T ss_pred CCCCCceeEEEEEECCCCccccCCceeEEEe--c---CCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCC
Confidence 01114699999988 65432110 1 123556789999996 5544322 25899999873 3
Q ss_pred ----EEEEecCCccccccccccccccCeEEEccCCeEEEEECCCC--EEEEEeCCCCceeEEEEeccCCcCCC------C
Q 039428 186 ----LLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSG--NLFKIDIRKEEEEVKLIELRGGSSLS------L 253 (335)
Q Consensus 186 ----~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~--~v~~~d~~~~~~~~~~~~~~g~~~~~------~ 253 (335)
...+... .......++++|||.+|++...++ +|++++++++ ..+.+. .+..... .
T Consensus 229 ~~~~~~~l~~~----------~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~--~~~~l~-~~~~~~~~p~w~~~ 295 (662)
T 3azo_A 229 RFADTRTLLGG----------PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATG--AATQLC-RREEEFAGPLWTPG 295 (662)
T ss_dssp CEEEEEEEEEE----------TTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTC--CEEESS-CCSSBSSCCCCSTT
T ss_pred cccccEEeCCC----------CCceEcceEECCCCeEEEEECCCCCeEEEEEECCCC--ceeecc-cccccccCcccccc
Confidence 2222110 012367889999997776665555 8999998765 333321 1111111 1
Q ss_pred CCeEEEcCCCcEEEEecC-CCeEEEEEcC
Q 039428 254 GDGLALLSPTKLVVAGNP-YPSARLVESS 281 (335)
Q Consensus 254 pdGia~d~~g~l~va~~~-~~~~~v~~~~ 281 (335)
...+++.+++.++++... ...+++++..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 324 (662)
T 3azo_A 296 MRWFAPLANGLIAVVHGKGAAVLGILDPE 324 (662)
T ss_dssp CCSEEECTTSCEEEEEBSSSCEEEEEETT
T ss_pred CceEeEeCCCEEEEEEEcCccEEEEEECC
Confidence 346788778887777432 2345555544
No 223
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.42 E-value=0.0001 Score=78.29 Aligned_cols=208 Identities=12% Similarity=0.020 Sum_probs=129.1
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
....+++|+++|+.++++..++.|..||..+++ .+. .+.... .....+++.++.+..+++++... +
T Consensus 658 ~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~----~~~---~~~~~~---~~v~~~~~~~~~~~~~l~sg~~d----~ 723 (1249)
T 3sfz_A 658 DEVLCCAFSSDDSYIATCSADKKVKIWDSATGK----LVH---TYDEHS---EQVNCCHFTNKSNHLLLATGSND----F 723 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCC----EEE---EEECCS---SCEEEEEECSSSSCCEEEEEETT----S
T ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc----eEE---EEcCCC---CcEEEEEEecCCCceEEEEEeCC----C
Confidence 345789999999988888888999999975554 122 222221 35678888864343333323221 3
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCc-EEEEecCCccc-c---------
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFT-A--------- 197 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~-~--------- 197 (335)
.|..||.++++....... . ....+.+++.|+|+..++.+..+.|..+|.... ....+....+. .
T Consensus 724 ~v~vwd~~~~~~~~~~~~----h-~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1249)
T 3sfz_A 724 FLKLWDLNQKECRNTMFG----H-TNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVE 798 (1249)
T ss_dssp CEEEEETTSSSEEEEECC----C-SSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCC
T ss_pred eEEEEECCCcchhheecC----C-CCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCcccccc
Confidence 599999998876643221 1 345678999999998888888899999987532 22222110000 0
Q ss_pred ---------cc--------------------------ccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEE
Q 039428 198 ---------KE--------------------------WYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKL 242 (335)
Q Consensus 198 ---------~~--------------------------~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~ 242 (335)
|. ..........++++|++.++++-..++.|..++...+. ....
T Consensus 799 ~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~-~~~~ 877 (1249)
T 3sfz_A 799 VIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRL-KVAD 877 (1249)
T ss_dssp CCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTE-EEEE
T ss_pred ceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-eeee
Confidence 00 00112335677888888666666777788888887763 3333
Q ss_pred EeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEc
Q 039428 243 IELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVES 280 (335)
Q Consensus 243 ~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~ 280 (335)
+. + . ......+++.++|..+++....+.+++.+.
T Consensus 878 ~~--~-h-~~~v~~v~~spdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 878 CR--G-H-LSWVHGVMFSPDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp EC--C-C-SSCEEEEEECTTSSEEEEEETTSCEEEEEH
T ss_pred cC--C-C-ccceEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 32 2 2 234678999999987777554466777663
No 224
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.40 E-value=6.7e-06 Score=75.25 Aligned_cols=204 Identities=9% Similarity=0.045 Sum_probs=117.7
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
...+++|+++++.+++...++.|..||..++.. ... ....... ......++++++...|+++..| ..
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~----~~~--~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d------~~ 123 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT----WKQ--TLVLLRL-NRAATFVRWSPNEDKFAVGSGA------RV 123 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------C----CCC--EEECCCC-SSCEEEEECCTTSSCCEEEESS------SC
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc----eee--eeEeccc-CCceEEEEECCCCCEEEEEecC------Ce
Confidence 457899999999888878889999998643330 000 1111111 1356789999744445543322 35
Q ss_pred EEEEECCCCeEE-EEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcE----------------EEEecC
Q 039428 130 LAAYDLSTWKRL-FLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQL----------------LSIIRS 192 (335)
Q Consensus 130 v~~~d~~~~~~~-~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~----------------~~~~~~ 192 (335)
|..||.++++.. ....+..+ .....+.+++.|+|+++++.+..+.|..+|..... .....
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~- 200 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRP--LRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCA- 200 (377)
T ss_dssp EEECCC-----CCCCEEECSS--CCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEE-
T ss_pred EEEEEECCcccceeeeEeecc--cCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhh-
Confidence 889998876521 00112111 13566789999999988887888889888864211 00000
Q ss_pred CccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCcee---EEEEeccCCcCCCCCCeEEEcCCCcEEEEe
Q 039428 193 PLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEE---VKLIELRGGSSLSLGDGLALLSPTKLVVAG 269 (335)
Q Consensus 193 ~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~---~~~~~~~g~~~~~~pdGia~d~~g~l~va~ 269 (335)
.+ ........++++|+|.++++-..++.|..+|...++.. ...+... ......+++.++|.++++.
T Consensus 201 -~~------~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 201 -EY------PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLS----QLPLRSLLWANESAIVAAG 269 (377)
T ss_dssp -CC------CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECS----SSCEEEEEEEETTEEEEEE
T ss_pred -cc------cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCC----CCceEEEEEcCCCCEEEEE
Confidence 11 11233789999999976666678889999998876311 2223221 1235789999999877775
Q ss_pred cCCCeEEEEEcC
Q 039428 270 NPYPSARLVESS 281 (335)
Q Consensus 270 ~~~~~~~v~~~~ 281 (335)
.. +.+.++...
T Consensus 270 ~~-~~~~~~~~~ 280 (377)
T 3dwl_C 270 YN-YSPILLQGN 280 (377)
T ss_dssp SS-SSEEEECCC
T ss_pred cC-CcEEEEEeC
Confidence 52 445555543
No 225
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.40 E-value=8.5e-05 Score=66.76 Aligned_cols=205 Identities=10% Similarity=0.082 Sum_probs=120.5
Q ss_pred CCCcceeeeEEcCCCCEEEEE-ec---CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCC--CeEEEEE
Q 039428 46 SPSFLCETAKWDDVGRRFLVS-FL---DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPR--NRLLVAF 119 (335)
Q Consensus 46 ~~~~~pegia~d~~g~~~~~~-~~---~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~--g~l~v~~ 119 (335)
+......+++|+|++..++++ .. ++.|..||..+++ .......... .....++++++. +.++++.
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~-----~~~~~~~~~~----~~v~~~~~~~~~~~~~~l~~~ 86 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD-----LKLLREIEKA----KPIKCGTFGATSLQQRYLATG 86 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS-----EEEEEEEEES----SCEEEEECTTCCTTTCCEEEE
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc-----ccceeeeccc----CcEEEEEEcCCCCCCceEEEe
Confidence 334456899999999777666 44 7899999865444 1110111111 256788998742 3444432
Q ss_pred ecCCCCccceEEEEECCCCe-EEEEeecCCCccCCCCCCce------eECCCCcEEEEeCCCCeEEEEccCCc--EEEEe
Q 039428 120 TDVLGNKYSALAAYDLSTWK-RLFLTQLSGKSEEKSTADDI------AVDAEGNAYVTDVVSSKIWKVGVEGQ--LLSII 190 (335)
Q Consensus 120 ~D~~~~~~~~v~~~d~~~~~-~~~~~~~~~~~~~~~~p~~~------~vd~~G~lyV~d~~~~~I~~~d~~g~--~~~~~ 190 (335)
. .. +.|..||.++++ ....... . ....+.+ +++++|+.+++.+..+.|..+|.... ....+
T Consensus 87 ~-~d----g~i~iwd~~~~~~~~~~~~~--~---~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 156 (357)
T 3i2n_A 87 D-FG----GNLHIWNLEAPEMPVYSVKG--H---KEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANM 156 (357)
T ss_dssp E-TT----SCEEEECTTSCSSCSEEECC--C---SSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEE
T ss_pred c-CC----CeEEEEeCCCCCccEEEEEe--c---ccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceec
Confidence 2 21 359999998765 3322211 1 1223334 66889988888888899999998643 22222
Q ss_pred cCCccccccccccccccCeEE----EccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcC---CC
Q 039428 191 RSPLFTAKEWYKNVFGLNGIV----YHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLS---PT 263 (335)
Q Consensus 191 ~~~~~~~~~~~~~~~~p~Gia----~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~---~g 263 (335)
... .. ........++ +++++.++++-..++.|..+|+...+ ....... . .....+++.+ ++
T Consensus 157 ~~~--~~----~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~-~----~~v~~~~~~~~~~~~ 224 (357)
T 3i2n_A 157 EPV--QG----ENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA-LRWETNI-K----NGVCSLEFDRKDISM 224 (357)
T ss_dssp CCC--TT----SCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE-EEEEEEC-S----SCEEEEEESCSSSSC
T ss_pred ccc--CC----CCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc-eeeecCC-C----CceEEEEcCCCCCCC
Confidence 110 00 0011245556 67889777777788999999999873 2222221 1 2367899998 77
Q ss_pred cEEEEecCCCeEEEEEcC
Q 039428 264 KLVVAGNPYPSARLVESS 281 (335)
Q Consensus 264 ~l~va~~~~~~~~v~~~~ 281 (335)
..+++....+.+++.+..
T Consensus 225 ~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 225 NKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp CEEEEEESTTEEEEEEEE
T ss_pred CEEEEECCCCeEEEEeCc
Confidence 766665444677777654
No 226
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.39 E-value=4.1e-05 Score=77.60 Aligned_cols=205 Identities=11% Similarity=0.091 Sum_probs=127.9
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCC-CeEEEEEecCCCCccc
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPR-NRLLVAFTDVLGNKYS 128 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~-g~l~v~~~D~~~~~~~ 128 (335)
...+++|+++|+.++++..++.|..||..++.. .. .....+.. .....++++++. ++++++.. .. +
T Consensus 11 ~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~-----~~--~~~l~~h~-~~V~~l~~s~~~~~~~l~s~s-~D----g 77 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-----KL--IDTLTGHE-GPVWRVDWAHPKFGTILASCS-YD----G 77 (753)
T ss_dssp CEEEECCCSSSCCEEEEETTTEEEEEEEETTEE-----EE--EEEECCCS-SCEEEEEECCTTSCSEEEEEE-TT----S
T ss_pred eeEEEEECCCCCeEEEEECCCcEEEEecCCCCC-----cc--ceeccCCc-CceEEEEecCCCCCCEEEEEe-CC----C
Confidence 357889999999888888899999998532221 11 11112111 356789997641 55554322 21 3
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCC--CcEEEEeCCCCeEEEEccCCcE---EEEecCCcccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE--GNAYVTDVVSSKIWKVGVEGQL---LSIIRSPLFTAKEWYKN 203 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~--G~lyV~d~~~~~I~~~d~~g~~---~~~~~~~~~~~~~~~~~ 203 (335)
.|..||..+++.......... ......+++.|+ |+.+++.+..+.|..+|..... ...+. ..
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h---~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~----------~~ 144 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVH---SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID----------AH 144 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCC---SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE----------CC
T ss_pred eEEEEECCCCcccccccccCC---CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee----------cC
Confidence 599999988864322222211 345678999999 8888888888999999976441 11110 01
Q ss_pred ccccCeEEEcc-------------CCeEEEEECCCCEEEEEeCCCCceeEEEE-eccCCcCCCCCCeEEEcCC---CcEE
Q 039428 204 VFGLNGIVYHP-------------DGFLIVIHMCSGNLFKIDIRKEEEEVKLI-ELRGGSSLSLGDGLALLSP---TKLV 266 (335)
Q Consensus 204 ~~~p~Gia~~~-------------dg~Lyvad~~~~~v~~~d~~~~~~~~~~~-~~~g~~~~~~pdGia~d~~---g~l~ 266 (335)
......++++| ++.++++...++.|..+|........... ...+ . -.....+++.++ +.++
T Consensus 145 ~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~-h-~~~V~~l~~sp~~~~~~~l 222 (753)
T 3jro_A 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-H-SDWVRDVAWSPTVLLRSYL 222 (753)
T ss_dssp SSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC-C-SSCEEEEEECCCCSSSEEE
T ss_pred CCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC-C-CCcEEEEEeccCCCCCCEE
Confidence 22367888888 47666666778888888887652121222 1222 1 133678999999 8877
Q ss_pred EEecCCCeEEEEEcCC
Q 039428 267 VAGNPYPSARLVESSD 282 (335)
Q Consensus 267 va~~~~~~~~v~~~~~ 282 (335)
++....+.+++.+...
T Consensus 223 ~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 223 ASVSQDRTCIIWTQDN 238 (753)
T ss_dssp EEEESSSCEEEEEESS
T ss_pred EEEecCCEEEEecCCC
Confidence 7755456788877654
No 227
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.39 E-value=0.00032 Score=69.09 Aligned_cols=204 Identities=9% Similarity=-0.006 Sum_probs=127.4
Q ss_pred cceeeeEEcCCCCE-EEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 49 FLCETAKWDDVGRR-FLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 49 ~~pegia~d~~g~~-~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
....+++|+|++.. ++++..++.|..||...++ ... .+ .+.. .....++++| +++++++....
T Consensus 148 ~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~----~~~---~l--~~H~-~~V~~v~fsp-dg~~las~s~D----- 211 (611)
T 1nr0_A 148 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK----FKS---TF--GEHT-KFVHSVRYNP-DGSLFASTGGD----- 211 (611)
T ss_dssp SCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE----EEE---EE--CCCS-SCEEEEEECT-TSSEEEEEETT-----
T ss_pred CCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe----Eee---ee--cccc-CceEEEEECC-CCCEEEEEECC-----
Confidence 34678999999874 5555889999999854333 111 22 2211 3568999998 67666643221
Q ss_pred ceEEEEECCCCeEEEEeecC---CCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC-cEEEEecCCcccccccccc
Q 039428 128 SALAAYDLSTWKRLFLTQLS---GKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG-QLLSIIRSPLFTAKEWYKN 203 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~---~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~~~~~~~~~ 203 (335)
..|..||..+++........ ..+. ....+.++++|+|+..++.+..+.|..+|... +....+.... . .
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h-~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~--~-----~ 283 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAH-SGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGT--R-----I 283 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSS-SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS--S-----G
T ss_pred CcEEEEECCCCcEeeeecccccccccc-CCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCC--C-----c
Confidence 35999999887665332110 0011 34567899999999889888899999999864 4433222110 0 0
Q ss_pred ccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 204 VFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 204 ~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
.....++.+ ++..+++-..++.+..+++..++ ..+.+. + + ......+++.++|+..++....+.+++.+...+
T Consensus 284 ~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~-~~~~~~--g-h-~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 284 EDQQLGIIW--TKQALVSISANGFINFVNPELGS-IDQVRY--G-H-NKAITALSSSADGKTLFSADAEGHINSWDISTG 356 (611)
T ss_dssp GGCEEEEEE--CSSCEEEEETTCCEEEEETTTTE-EEEEEC--C-C-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred cceeEEEEE--cCCEEEEEeCCCcEEEEeCCCCC-cceEEc--C-C-CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Confidence 111334454 56556666678888888887762 222222 2 2 234678999999987777554577888887654
No 228
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.39 E-value=0.00011 Score=68.54 Aligned_cols=218 Identities=12% Similarity=0.126 Sum_probs=129.5
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCC-----cceeeeeEEeecCCcC---------CCCcceEEEeCCC--C
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSP-----GTVLEEVKLVKEDDVV---------GNATMGIAVDRPR--N 113 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~-----~~v~~~~~~~~~~~~~---------~~~p~Gi~~d~~~--g 113 (335)
....++|+++|++++++..++.|..|+..++... .+ ......+...... ......+++.+++ .
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~-~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~ 108 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGE-YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAA 108 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCC-EEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSS
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccc-eeEecccccccccccccccccccCceEEEEEcCCCCcc
Confidence 3568999999999888888999999985433200 00 0000111111100 0246789999743 3
Q ss_pred eEEEEEecCCCCccceEEEEECCCCeEEEE-------------------------------------eecCCCccCCCCC
Q 039428 114 RLLVAFTDVLGNKYSALAAYDLSTWKRLFL-------------------------------------TQLSGKSEEKSTA 156 (335)
Q Consensus 114 ~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~-------------------------------------~~~~~~~~~~~~p 156 (335)
.|..+..| ..|..||..+++.... ..+. .+ .....
T Consensus 109 ~l~s~s~d------~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-h~~~v 180 (447)
T 3dw8_B 109 QFLLSTND------KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA-NA-HTYHI 180 (447)
T ss_dssp EEEEEECS------SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC-SC-CSSCC
T ss_pred eEEEeCCC------CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec-cC-CCcce
Confidence 44443332 3488888765433100 0000 01 13456
Q ss_pred CceeECCCCcEEEEeCCCCeEEEEccC-Cc-EEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeC
Q 039428 157 DDIAVDAEGNAYVTDVVSSKIWKVGVE-GQ-LLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDI 233 (335)
Q Consensus 157 ~~~~vd~~G~lyV~d~~~~~I~~~d~~-g~-~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~ 233 (335)
+.+++.++|+++++. ..+.|..+|.+ +. ....+...... ........+.++++|++ .++++-..++.|..+|+
T Consensus 181 ~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 181 NSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPAN---MEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp CEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSS---GGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred EEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeeccccc---ccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 789999999988887 68999999987 32 22222110000 01122347899999998 88888888999999999
Q ss_pred CCCcee----EEEEeccCCc--------CCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCC
Q 039428 234 RKEEEE----VKLIELRGGS--------SLSLGDGLALLSPTKLVVAGNPYPSARLVESSD 282 (335)
Q Consensus 234 ~~~~~~----~~~~~~~g~~--------~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~ 282 (335)
...+ . ...+...... .......+++.++|+++++... +.+++.+...
T Consensus 257 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 257 RASA-LCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp TTCS-SSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred cCCc-cccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 8763 2 3444422100 0013578999999988877655 7888888754
No 229
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.38 E-value=0.00029 Score=62.51 Aligned_cols=205 Identities=11% Similarity=0.106 Sum_probs=122.4
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCC-CCeEEEEEecCCCCccc
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRP-RNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~-~g~l~v~~~D~~~~~~~ 128 (335)
.-..++|+++|+.++++..++.|..||..+... +.+. .+.... .....+++.+. .++++++.... .
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~--~~~~---~l~gH~---~~V~~v~~s~~~~g~~l~s~s~D-----~ 77 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH--KLID---TLTGHE---GPVWRVDWAHPKFGTILASCSYD-----G 77 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB--CCCE---EECCCS---SCEEEEEECCGGGCSEEEEEETT-----T
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc--EEEE---EEcccc---CCeEEEEecCCCcCCEEEEEcCC-----C
Confidence 456899999999888888899999998542221 0011 221111 24578888642 35555543221 3
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCC--CcEEEEeCCCCeEEEEccCCcE---EEEecCCcccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE--GNAYVTDVVSSKIWKVGVEGQL---LSIIRSPLFTAKEWYKN 203 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~--G~lyV~d~~~~~I~~~d~~g~~---~~~~~~~~~~~~~~~~~ 203 (335)
.|..||.++++......+.. . ....+.+++.|+ |.++++.+..+.|..+|..... ...+.. .
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~--h-~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~----------h 144 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHAV--H-SASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDA----------H 144 (297)
T ss_dssp EEEEEEBSSSCBCCCEEECC--C-SSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEEC----------C
T ss_pred EEEEEEcCCCceEEEEEeec--C-CCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeec----------c
Confidence 69999998764211111111 1 245678999987 7888888888999998875321 111110 1
Q ss_pred ccccCeEEEccC-------------CeEEEEECCCCEEEEEeCCCCceeEEEE-eccCCcCCCCCCeEEEcCCC---cEE
Q 039428 204 VFGLNGIVYHPD-------------GFLIVIHMCSGNLFKIDIRKEEEEVKLI-ELRGGSSLSLGDGLALLSPT---KLV 266 (335)
Q Consensus 204 ~~~p~Gia~~~d-------------g~Lyvad~~~~~v~~~d~~~~~~~~~~~-~~~g~~~~~~pdGia~d~~g---~l~ 266 (335)
....+.++++|+ +.++++-..++.|..+|.+..+...... .+.+ + -.....+++.|++ .++
T Consensus 145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~-H-~~~V~~v~~sp~~~~~~~l 222 (297)
T 2pm7_B 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-H-SDWVRDVAWSPTVLLRSYM 222 (297)
T ss_dssp SSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC-C-SSCEEEEEECCCCSSSEEE
T ss_pred cCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC-C-CCceEEEEECCCCCCceEE
Confidence 123667888876 4577777778888888876542112111 2223 2 1335789999884 666
Q ss_pred EEecCCCeEEEEEcCC
Q 039428 267 VAGNPYPSARLVESSD 282 (335)
Q Consensus 267 va~~~~~~~~v~~~~~ 282 (335)
++....+.+++.+...
T Consensus 223 as~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 223 ASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEEETTSCEEEEEESS
T ss_pred EEEECCCcEEEEEeCC
Confidence 6655456788877653
No 230
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.37 E-value=0.00075 Score=60.53 Aligned_cols=245 Identities=8% Similarity=0.016 Sum_probs=135.3
Q ss_pred CcceeeeEEcCC---CCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCC
Q 039428 48 SFLCETAKWDDV---GRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLG 124 (335)
Q Consensus 48 ~~~pegia~d~~---g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~ 124 (335)
.....+++|+++ |+.++++..++.|..||..+... ... ..+.... .....+++++ +++.+++.. ..
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~---~~~--~~~~~h~---~~v~~~~~~~-~~~~l~s~~-~d- 107 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIP--KAQQMHT---GPVLDVCWSD-DGSKVFTAS-CD- 107 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC---EEE--EEEEECS---SCEEEEEECT-TSSEEEEEE-TT-
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc---eeE--EEecccc---CCEEEEEECc-CCCEEEEEc-CC-
Confidence 345689999999 57777778889999998644221 111 1221111 3568999998 554444322 21
Q ss_pred CccceEEEEECCCCeEEEEeecCCCccCCCCCCceeE--CCCCcEEEEeCCCCeEEEEccCC-cEEEEecCCcc------
Q 039428 125 NKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAV--DAEGNAYVTDVVSSKIWKVGVEG-QLLSIIRSPLF------ 195 (335)
Q Consensus 125 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~v--d~~G~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~------ 195 (335)
+.|..||.++++....... ....+.+++ +++|+++++.+..+.|..+|... +....+.....
T Consensus 108 ---g~v~iwd~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 178 (368)
T 3mmy_A 108 ---KTAKMWDLSSNQAIQIAQH------DAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADV 178 (368)
T ss_dssp ---SEEEEEETTTTEEEEEEEC------SSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEE
T ss_pred ---CcEEEEEcCCCCceeeccc------cCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEe
Confidence 3699999998876643221 345677888 88998888878888999998753 22221111000
Q ss_pred -----------------c--c-cc-----ccccccccCeEEEccCC----eEEEEECCCCEEEEEeCCCCc--eeEEEEe
Q 039428 196 -----------------T--A-KE-----WYKNVFGLNGIVYHPDG----FLIVIHMCSGNLFKIDIRKEE--EEVKLIE 244 (335)
Q Consensus 196 -----------------~--~-~~-----~~~~~~~p~Gia~~~dg----~Lyvad~~~~~v~~~d~~~~~--~~~~~~~ 244 (335)
. . +. ..........+++.++. ..+++-..++.|..++.+... .....+.
T Consensus 179 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~ 258 (368)
T 3mmy_A 179 IYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK 258 (368)
T ss_dssp ETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE
T ss_pred cCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee
Confidence 0 0 00 00001112333443332 225555677888888887652 0222222
Q ss_pred ccCCc--------CCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEe-CCe-EEEE
Q 039428 245 LRGGS--------SLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATVK-DGR-VYLS 314 (335)
Q Consensus 245 ~~g~~--------~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~-~g~-lyV~ 314 (335)
..... .......+++.++++++++....+.+++.+...+ +....+... ....+++++. +++ |..+
T Consensus 259 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~-~~~v~~~~~s~~g~~l~~~ 333 (368)
T 3mmy_A 259 CHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDAR----TKLKTSEQL-DQPISACCFNHNGNIFAYA 333 (368)
T ss_dssp CSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTT----EEEEECCCC-SSCEEEEEECTTSSCEEEE
T ss_pred eeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCC----cEEEEecCC-CCCceEEEECCCCCeEEEE
Confidence 11100 0013568999999976666554577898887654 223333322 2234678885 555 4444
Q ss_pred ecc
Q 039428 315 HLL 317 (335)
Q Consensus 315 ~~~ 317 (335)
...
T Consensus 334 s~d 336 (368)
T 3mmy_A 334 SSY 336 (368)
T ss_dssp ECC
T ss_pred ecc
Confidence 433
No 231
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.36 E-value=0.0003 Score=61.80 Aligned_cols=200 Identities=12% Similarity=0.059 Sum_probs=120.7
Q ss_pred EEEcCCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEec
Q 039428 42 YQYHSPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTD 121 (335)
Q Consensus 42 ~~~~~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D 121 (335)
..+.+......++++ ++++.+++...++.|..||..++. ... .+.... .....+++++++..|+++..|
T Consensus 12 ~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~----~~~---~~~~~~---~~v~~~~~~~~~~~l~~~~~d 80 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW----LGT---VVYTGQ---GFLNSVCYDSEKELLLFGGKD 80 (313)
T ss_dssp EEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE----EEE---EEEECS---SCEEEEEEETTTTEEEEEETT
T ss_pred HHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE----EEE---EeecCC---ccEEEEEECCCCCEEEEecCC
Confidence 344454455678999 888888888889999999864333 111 221221 356899999844444443222
Q ss_pred CCCCccceEEEEECCCC---eEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccc
Q 039428 122 VLGNKYSALAAYDLSTW---KRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAK 198 (335)
Q Consensus 122 ~~~~~~~~v~~~d~~~~---~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~ 198 (335)
+.|..||.... +.... +.. . ......+.+ +++.+++.+..+.|..+| .++....+..
T Consensus 81 ------g~i~~~~~~~~~~~~~~~~--~~~--~-~~~i~~~~~--~~~~l~~~~~d~~i~~~d-~~~~~~~~~~------ 140 (313)
T 3odt_A 81 ------TMINGVPLFATSGEDPLYT--LIG--H-QGNVCSLSF--QDGVVISGSWDKTAKVWK-EGSLVYNLQA------ 140 (313)
T ss_dssp ------SCEEEEETTCCTTSCC-CE--ECC--C-SSCEEEEEE--ETTEEEEEETTSEEEEEE-TTEEEEEEEC------
T ss_pred ------CeEEEEEeeecCCCCcccc--hhh--c-ccCEEEEEe--cCCEEEEEeCCCCEEEEc-CCcEEEeccc------
Confidence 34888887543 22211 111 1 234456777 566777777889999999 4444332221
Q ss_pred cccccccccCeEEEcc-CCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEE
Q 039428 199 EWYKNVFGLNGIVYHP-DGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARL 277 (335)
Q Consensus 199 ~~~~~~~~p~Gia~~~-dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v 277 (335)
.......+++.+ ++.++++-..++.|..+|... ....+.... ......+++.+++.++++.. .+.+++
T Consensus 141 ----~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~-dg~i~i 209 (313)
T 3odt_A 141 ----HNASVWDAKVVSFSENKFLTASADKTIKLWQNDK---VIKTFSGIH---NDVVRHLAVVDDGHFISCSN-DGLIKL 209 (313)
T ss_dssp ----CSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE---EEEEECSSC---SSCEEEEEEEETTEEEEEET-TSEEEE
T ss_pred ----CCCceeEEEEccCCCCEEEEEECCCCEEEEecCc---eEEEEeccC---cccEEEEEEcCCCeEEEccC-CCeEEE
Confidence 112366788888 776666667788899998332 334443211 23467899999988444433 467888
Q ss_pred EEcCCC
Q 039428 278 VESSDG 283 (335)
Q Consensus 278 ~~~~~~ 283 (335)
.+...+
T Consensus 210 ~d~~~~ 215 (313)
T 3odt_A 210 VDMHTG 215 (313)
T ss_dssp EETTTC
T ss_pred EECCch
Confidence 887654
No 232
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.35 E-value=2.8e-05 Score=77.70 Aligned_cols=160 Identities=11% Similarity=0.024 Sum_probs=87.8
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCC---c
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGN---K 126 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~---~ 126 (335)
.+.+++|+|+|++++. ..++.|+.+|..+++. . .++............++++|++..|..+..+.... .
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~-----~--~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~ 89 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTS-----T--VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSY 89 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC-----E--EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCC
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcE-----E--EEeccccccccccceEEECCCCCEEEEEecCccceeecc
Confidence 3678999999996554 4578999998654441 1 23322221101367899998444444432222110 0
Q ss_pred cceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCCcEE-EEecCCc--c--cc-cc
Q 039428 127 YSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEGQLL-SIIRSPL--F--TA-KE 199 (335)
Q Consensus 127 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g~~~-~~~~~~~--~--~~-~~ 199 (335)
...++.+|.++++....... .........++++|||+ +.++.. +.|++++.++... .+..... . .. ++
T Consensus 90 ~~~i~~~d~~~~~~~~l~~~---~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 164 (723)
T 1xfd_A 90 TGYYVLSKIPHGDPQSLDPP---EVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSD 164 (723)
T ss_dssp CSEEEEEESSSCCCEECCCT---TCCSCCCSBCCBCSSTTCEEEEET--TEEEEESSSSSCCEEEECCCBTTTEEEEECC
T ss_pred eeeEEEEECCCCceEeccCC---ccccccccccEECCCCCEEEEEEC--CeEEEEECCCCceEEEecCCCCCceECcccc
Confidence 14699999998865321111 11123467899999996 333322 6899999875433 2221100 0 00 00
Q ss_pred ---ccccccccCeEEEccCC-eEEEEE
Q 039428 200 ---WYKNVFGLNGIVYHPDG-FLIVIH 222 (335)
Q Consensus 200 ---~~~~~~~p~Gia~~~dg-~Lyvad 222 (335)
.........+++++||| .|+++.
T Consensus 165 ~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 165 WLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp HHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred eeEEEEeccCcceEEECCCCCEEEEEE
Confidence 00001124689999999 666654
No 233
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.34 E-value=0.0013 Score=58.42 Aligned_cols=198 Identities=11% Similarity=0.061 Sum_probs=123.4
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
....+++|+++|+.+++...++.|..++..... .. ....... .....+...+.+..|+.+..| .
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~-----~~--~~~~~~~---~~~~~~~~~~~~~~l~s~s~d------~ 150 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGT-----TT--RRFVGHT---KDVLSVAFSSDNRQIVSGSRD------K 150 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-----EE--EEEECCS---SCEEEEEECTTSSCEEEEETT------S
T ss_pred CCEEEEEECCCCCEEEEEcccccceEEeecccc-----ee--eeecCCC---CceeEEEEeecCccceeecCC------C
Confidence 345789999999988888889999999854332 11 1111111 234556666634444443222 3
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCC--cEEEEeCCCCeEEEEccCCcEEE-EecCCcccccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEG--NAYVTDVVSSKIWKVGVEGQLLS-IIRSPLFTAKEWYKNVF 205 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G--~lyV~d~~~~~I~~~d~~g~~~~-~~~~~~~~~~~~~~~~~ 205 (335)
.+..||......... .... . ......+++.+++ .++++....+.|..+|....... .+.. ...
T Consensus 151 ~~~~~d~~~~~~~~~-~~~~--~-~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~----------h~~ 216 (340)
T 4aow_A 151 TIKLWNTLGVCKYTV-QDES--H-SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIG----------HTG 216 (340)
T ss_dssp CEEEECTTSCEEEEE-CSSS--C-SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECC----------CSS
T ss_pred eEEEEEeCCCceEEE-Eecc--c-cCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecC----------CCC
Confidence 488899876544322 1211 1 2344567776654 57777777889999998754432 2211 112
Q ss_pred ccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 206 GLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 206 ~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
..+.++++|+|.++++-..++.|..+|....+ ....+... .....+++.+++.++++.. .+.+++.+...+
T Consensus 217 ~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~-~~~~~~~~-----~~v~~~~~~~~~~~~~~~~-d~~i~iwd~~~~ 287 (340)
T 4aow_A 217 YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK-HLYTLDGG-----DIINALCFSPNRYWLCAAT-GPSIKIWDLEGK 287 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTTE-EEEEEECS-----SCEEEEEECSSSSEEEEEE-TTEEEEEETTTT
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEeccCc-eeeeecCC-----ceEEeeecCCCCceeeccC-CCEEEEEECCCC
Confidence 36789999999877777788999999998864 44444321 2256788888887766644 367888776544
No 234
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.33 E-value=4.1e-05 Score=71.92 Aligned_cols=203 Identities=8% Similarity=0.071 Sum_probs=128.1
Q ss_pred ceeeeEEcCC-CCEEEEEecCCeEEEEECCCC--------CCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEe
Q 039428 50 LCETAKWDDV-GRRFLVSFLDGGVGQVLVPDE--------YSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFT 120 (335)
Q Consensus 50 ~pegia~d~~-g~~~~~~~~~~~I~~~d~~~g--------~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~ 120 (335)
.+..+++.++ ++++++...++.|..|+.... .. +... .+.... ....++++++.+..++++ +
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~--~~~~---~~~~h~---~~v~~l~~~~~~~~~l~s-~ 200 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGEC--QPDL---RLRGHQ---KEGYGLSWNPNLNGYLLS-A 200 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCC--CCSE---EEECCS---SCCCCEEECTTSTTEEEE-E
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccC--CCcE---EecCCC---CCeEEEEeCCCCCCeEEE-E
Confidence 4678999998 455555577899999985421 00 0011 111111 356899999744425453 2
Q ss_pred cCCCCccceEEEEECCCCeE----E-EEeecCCCccCCCCCCceeECC-CCcEEEEeCCCCeEEEEccCCc----EEEEe
Q 039428 121 DVLGNKYSALAAYDLSTWKR----L-FLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKVGVEGQ----LLSII 190 (335)
Q Consensus 121 D~~~~~~~~v~~~d~~~~~~----~-~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~d~~g~----~~~~~ 190 (335)
... +.|..||..++.. . ....+.. . ....+++++++ +++++++....+.|..+|.... ....+
T Consensus 201 ~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~--h-~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~ 273 (430)
T 2xyi_A 201 SDD----HTICLWDINATPKEHRVIDAKNIFTG--H-TAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV 273 (430)
T ss_dssp CTT----SCEEEEETTSCCBGGGEEECSEEECC--C-SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE
T ss_pred eCC----CeEEEEeCCCCCCCCceeccceeecC--C-CCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe
Confidence 221 3599999876321 1 0011111 1 34578899999 5789999889999999998743 11111
Q ss_pred cCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCC-cEEEE
Q 039428 191 RSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPT-KLVVA 268 (335)
Q Consensus 191 ~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g-~l~va 268 (335)
. .....++.|+++|++ +++++...++.|..+|+...+.....+.... .....+++.+++ .++++
T Consensus 274 ~----------~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~----~~v~~i~~sp~~~~~l~s 339 (430)
T 2xyi_A 274 D----------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK----DEIFQVQWSPHNETILAS 339 (430)
T ss_dssp E----------CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCS----SCEEEEEECSSCTTEEEE
T ss_pred e----------cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCC----CCEEEEEECCCCCCEEEE
Confidence 1 012348899999998 6888888899999999987421344444222 236789999988 56777
Q ss_pred ecCCCeEEEEEcCC
Q 039428 269 GNPYPSARLVESSD 282 (335)
Q Consensus 269 ~~~~~~~~v~~~~~ 282 (335)
+...+.+++.+...
T Consensus 340 ~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 340 SGTDRRLHVWDLSK 353 (430)
T ss_dssp EETTSCCEEEEGGG
T ss_pred EeCCCcEEEEeCCC
Confidence 65557788888654
No 235
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.33 E-value=0.00033 Score=65.35 Aligned_cols=208 Identities=11% Similarity=0.051 Sum_probs=123.8
Q ss_pred cceeeeEEcC-CCCEEEEEecCCeEEEEECCC---CCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCC
Q 039428 49 FLCETAKWDD-VGRRFLVSFLDGGVGQVLVPD---EYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLG 124 (335)
Q Consensus 49 ~~pegia~d~-~g~~~~~~~~~~~I~~~d~~~---g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~ 124 (335)
....+++|++ ++++++++..++.|..||..+ +.. ......... ......++++++...|+++..|
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~----~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~d--- 132 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEV----YSSSLTYDC----SSTVTQITMIPNFDAFAVSSKD--- 132 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCC----CSCSEEEEC----SSCEEEEEECTTSSEEEEEETT---
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcc----cceeeeccC----CCCEEEEEEeCCCCEEEEEeCC---
Confidence 4568999999 898888778899999998533 210 000001111 1356899999743444443222
Q ss_pred CccceEEEEECC---CCeEEE--------EeecCCCccCCCCCCcee--ECCCCcEEEEeCCCCeEEEEccCC-cEEEEe
Q 039428 125 NKYSALAAYDLS---TWKRLF--------LTQLSGKSEEKSTADDIA--VDAEGNAYVTDVVSSKIWKVGVEG-QLLSII 190 (335)
Q Consensus 125 ~~~~~v~~~d~~---~~~~~~--------~~~~~~~~~~~~~p~~~~--vd~~G~lyV~d~~~~~I~~~d~~g-~~~~~~ 190 (335)
..|..||.+ +++... ...+...+ .......+. ..++++++++.+..+.|..+|... +....+
T Consensus 133 ---g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 208 (437)
T 3gre_A 133 ---GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFG-KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQII 208 (437)
T ss_dssp ---SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGS-SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ---CEEEEEEeccccCCceeeccccceeEEEEccCcc-cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEE
Confidence 358888873 332221 11111100 122333444 557888888888889999999864 444333
Q ss_pred cCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEc----CCCcEE
Q 039428 191 RSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALL----SPTKLV 266 (335)
Q Consensus 191 ~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d----~~g~l~ 266 (335)
.... .......++++|++.++++-..++.|..+|+..++ ....+.... . .....+++. +++.++
T Consensus 209 ~~~~--------h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~-~--~~v~~~~~~~~~s~~~~~l 276 (437)
T 3gre_A 209 ENSP--------RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV-LIRSWSFGD-H--APITHVEVCQFYGKNSVIV 276 (437)
T ss_dssp ECCG--------GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE-EEEEEBCTT-C--EEEEEEEECTTTCTTEEEE
T ss_pred ccCC--------CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc-EEEEEecCC-C--CceEEEEeccccCCCccEE
Confidence 2110 11247899999999777777788999999998763 444444322 1 123456443 456666
Q ss_pred EEecCCCeEEEEEcCCC
Q 039428 267 VAGNPYPSARLVESSDG 283 (335)
Q Consensus 267 va~~~~~~~~v~~~~~~ 283 (335)
++....+.+++.+...+
T Consensus 277 ~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 277 VGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp EEESTTEEEEEEETTTT
T ss_pred EEEcCCCcEEEEEcCCC
Confidence 76554466888887655
No 236
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.32 E-value=7.6e-05 Score=67.23 Aligned_cols=211 Identities=8% Similarity=0.032 Sum_probs=126.2
Q ss_pred cCCCcceeeeEEcC-CCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeec-CCcCCCCcceEEEeCCCCeEEEEEecC
Q 039428 45 HSPSFLCETAKWDD-VGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKE-DDVVGNATMGIAVDRPRNRLLVAFTDV 122 (335)
Q Consensus 45 ~~~~~~pegia~d~-~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~-~~~~~~~p~Gi~~d~~~g~l~v~~~D~ 122 (335)
.+......+++|++ +++++++...++.|..||..+++. +. .+.. .. .......+++++ +++.+++....
T Consensus 112 ~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----~~---~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~d 182 (366)
T 3k26_A 112 VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL----VA---IFGGVEG-HRDEVLSADYDL-LGEKIMSCGMD 182 (366)
T ss_dssp ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE----EE---EECSTTS-CSSCEEEEEECT-TSSEEEEEETT
T ss_pred cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE----EE---Eeccccc-ccCceeEEEECC-CCCEEEEecCC
Confidence 33444568999999 888887778899999999654431 11 2110 11 113578999998 45444432221
Q ss_pred CCCccceEEEEECCCCeEEEEee----cCC-------------------CccCCCCCCceeECCCCcEEEEeCCCCeEEE
Q 039428 123 LGNKYSALAAYDLSTWKRLFLTQ----LSG-------------------KSEEKSTADDIAVDAEGNAYVTDVVSSKIWK 179 (335)
Q Consensus 123 ~~~~~~~v~~~d~~~~~~~~~~~----~~~-------------------~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~ 179 (335)
+.|..||.++++...... ... ........+.++++ |+++++.+..+.|..
T Consensus 183 -----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~ 255 (366)
T 3k26_A 183 -----HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVC 255 (366)
T ss_dssp -----SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEE
T ss_pred -----CCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEE
Confidence 359999998764321000 000 00013445667776 667888888899999
Q ss_pred EccCCcEE------------EEecCCccccccccccccccCeEEEccC--CeEEEEECCCCEEEEEeCCCCce---eEEE
Q 039428 180 VGVEGQLL------------SIIRSPLFTAKEWYKNVFGLNGIVYHPD--GFLIVIHMCSGNLFKIDIRKEEE---EVKL 242 (335)
Q Consensus 180 ~d~~g~~~------------~~~~~~~~~~~~~~~~~~~p~Gia~~~d--g~Lyvad~~~~~v~~~d~~~~~~---~~~~ 242 (335)
+|...... ..+. .+. ........++++|+ |.++++-..++.|..+|...++. ....
T Consensus 256 wd~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 328 (366)
T 3k26_A 256 WKPGKMEDDIDKIKPSESNVTILG--RFD-----YSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTT 328 (366)
T ss_dssp EEESSTTCCGGGCCTTCCCEEEEE--EEE-----CSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEE
T ss_pred EeCCCccccccccccCCcchheec--ccc-----ccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceE
Confidence 98754211 0000 010 01123778899998 87777778889999999987531 2223
Q ss_pred EeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEc
Q 039428 243 IELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVES 280 (335)
Q Consensus 243 ~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~ 280 (335)
+.... . ......+++.++++++++....+.+++.+.
T Consensus 329 ~~~~~-~-~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 329 LTHHK-C-GAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp ECCTT-C-CSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred Ecccc-c-CCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 32211 0 134678999999987777554466776653
No 237
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.31 E-value=9.7e-05 Score=73.12 Aligned_cols=211 Identities=10% Similarity=0.029 Sum_probs=116.7
Q ss_pred cceeeeEEcCCCCEEEEEecC----------CeEEEEECCC------CCCCcceeeeeEEeecCCcCCCCcceEEEeCCC
Q 039428 49 FLCETAKWDDVGRRFLVSFLD----------GGVGQVLVPD------EYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPR 112 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~----------~~I~~~d~~~------g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~ 112 (335)
....+++|+|+|+.++....+ .+|+++|..+ +. .. .+.... ......++++|++
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~---~l~~~~--~~~~~~~~~SpDG 199 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-----VR---ELSDDA--HRFVTGPRLSPDG 199 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-----SE---ESSCSC--SSEECCCEECTTS
T ss_pred ccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-----ee---EEEecC--CCcccCceECCCC
Confidence 346789999999977666322 4899999644 22 11 222011 1245678899855
Q ss_pred CeEEEEEecCCCC--ccceEEEEECC-CC---eEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCC--eEEEEccCC
Q 039428 113 NRLLVAFTDVLGN--KYSALAAYDLS-TW---KRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSS--KIWKVGVEG 184 (335)
Q Consensus 113 g~l~v~~~D~~~~--~~~~v~~~d~~-~~---~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~--~I~~~d~~g 184 (335)
..|+.+..+.... ....|+.+|.+ ++ +....... . ......+++.|||++|++....+ .|++++.++
T Consensus 200 ~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~----~-~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~ 274 (662)
T 3azo_A 200 RQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG----P-EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT 274 (662)
T ss_dssp SEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE----T-TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTT
T ss_pred CEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC----C-CceEcceEECCCCeEEEEECCCCCeEEEEEECCC
Confidence 5565544332110 11469999998 56 33322211 0 23456789999999877765555 899999854
Q ss_pred cEEEEecCC--ccccccccccccccCeEEEccCCeEEEEEC-CCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeE-EEc
Q 039428 185 QLLSIIRSP--LFTAKEWYKNVFGLNGIVYHPDGFLIVIHM-CSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGL-ALL 260 (335)
Q Consensus 185 ~~~~~~~~~--~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~-~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGi-a~d 260 (335)
+..+.+-.. ....|.+ ..+...++++++++++++.. ...+|+++|.+++ ..+.+.... .....+ +.+
T Consensus 275 ~~~~~l~~~~~~~~~p~w---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~----~~~~~~~s~~ 345 (662)
T 3azo_A 275 GAATQLCRREEEFAGPLW---TPGMRWFAPLANGLIAVVHGKGAAVLGILDPESG--ELVDAAGPW----TEWAATLTVS 345 (662)
T ss_dssp CCEEESSCCSSBSSCCCC---STTCCSEEECTTSCEEEEEBSSSCEEEEEETTTT--EEEECCSSC----CEEEEEEEEE
T ss_pred CceeecccccccccCccc---cccCceEeEeCCCEEEEEEEcCccEEEEEECCCC--cEEEecCCC----CeEEEEEecC
Confidence 433322110 0111110 11246789998896665544 4558999998876 444443221 113455 555
Q ss_pred CCCcEEEEecCCC--eEEEEEcCCC
Q 039428 261 SPTKLVVAGNPYP--SARLVESSDG 283 (335)
Q Consensus 261 ~~g~l~va~~~~~--~~~v~~~~~~ 283 (335)
.+..+|++..... .+++++...+
T Consensus 346 ~~~~~~~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 346 GTRAVGVAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp TTEEEEEEEETTEEEEEEEEETTTC
T ss_pred CCEEEEEEcCCCCCCEEEEEECCCC
Confidence 5444555543222 4555554443
No 238
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.31 E-value=7.5e-05 Score=68.42 Aligned_cols=197 Identities=13% Similarity=0.110 Sum_probs=109.9
Q ss_pred eEEcCCCCEEEEEec-CC--eEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceE
Q 039428 54 AKWDDVGRRFLVSFL-DG--GVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSAL 130 (335)
Q Consensus 54 ia~d~~g~~~~~~~~-~~--~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v 130 (335)
++|+|+|+.+++... ++ .|+.+|..+++ .. .+...+. ....+++++|++..|+.+..+ ..|
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~-----~~--~lt~~~~---~~~~~~~~spdg~~l~~~~~~------~~l 104 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV-----AT--QLTEGRG---DNTFGGFLSPDDDALFYVKDG------RNL 104 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCE-----EE--ECCCSSC---BCSSSCEECTTSSEEEEEETT------TEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCc-----eE--EeeeCCC---CCccceEEcCCCCEEEEEeCC------CeE
Confidence 889999996666633 44 59999965443 11 1221111 122367899855566664322 359
Q ss_pred EEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEe----------------------CCCCeEEEEccCCcEEE
Q 039428 131 AAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTD----------------------VVSSKIWKVGVEGQLLS 188 (335)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d----------------------~~~~~I~~~d~~g~~~~ 188 (335)
+++|+++++......... . ........++++|+.+++- .....|+++|.++...+
T Consensus 105 ~~~d~~~g~~~~~~~~~~--~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 181 (388)
T 3pe7_A 105 MRVDLATLEENVVYQVPA--E-WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST 181 (388)
T ss_dssp EEEETTTCCEEEEEECCT--T-EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE
T ss_pred EEEECCCCcceeeeechh--h-cccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE
Confidence 999999987664443311 0 1111123458888766531 23468999998754433
Q ss_pred EecCCccccccccccccccCeEEEcc-CC-eEEEEECC-----CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcC
Q 039428 189 IIRSPLFTAKEWYKNVFGLNGIVYHP-DG-FLIVIHMC-----SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLS 261 (335)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~p~Gia~~~-dg-~Lyvad~~-----~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~ 261 (335)
.+.. .......++++| || .|+++... ..+|+.++.++. ..+.+.... . ......+++.+
T Consensus 182 ~l~~----------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~-~-~~~~~~~~~sp 247 (388)
T 3pe7_A 182 VILQ----------ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT--NMRKVKTHA-E-GESCTHEFWVP 247 (388)
T ss_dssp EEEE----------ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC--CCEESCCCC-T-TEEEEEEEECT
T ss_pred Eeec----------CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC--ceEEeeeCC-C-CcccccceECC
Confidence 2211 011256889999 99 56444433 458999998876 333332111 0 00123567888
Q ss_pred CCc-E-EEEec-CCCe--EEEEEcCCC
Q 039428 262 PTK-L-VVAGN-PYPS--ARLVESSDG 283 (335)
Q Consensus 262 ~g~-l-~va~~-~~~~--~~v~~~~~~ 283 (335)
+|+ | |++.. +... +++++...+
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 248 DGSALVYVSYLKGSPDRFIYSADPETL 274 (388)
T ss_dssp TSSCEEEEEEETTCCCEEEEEECTTTC
T ss_pred CCCEEEEEecCCCCCcceEEEEecCCC
Confidence 885 5 44432 2122 666766544
No 239
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.30 E-value=0.00064 Score=61.43 Aligned_cols=160 Identities=6% Similarity=-0.014 Sum_probs=97.1
Q ss_pred CcceEEEeC--CCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEE
Q 039428 102 ATMGIAVDR--PRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWK 179 (335)
Q Consensus 102 ~p~Gi~~d~--~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~ 179 (335)
....+++++ ++..+..+..| +.|..||.++++........ . ....+.++++|+|+++++.+..+.|..
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~d------g~i~~wd~~~~~~~~~~~~~---~-~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNR------GTIGFQSYEDDSQYIVHSAK---S-DVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp CEEEEECCC---CCEEEEEETT------CCEEEEESSSSCEEEEECCC---S-SCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred CEEEEEcCCCCCCCEEEEEeCC------CcEEEEECCCCcEEEEEecC---C-CCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 467888886 44444333222 35999999988765332221 1 234778999999999998888999999
Q ss_pred EccCCcE-E-EEecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCC-CCe
Q 039428 180 VGVEGQL-L-SIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSL-GDG 256 (335)
Q Consensus 180 ~d~~g~~-~-~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~-pdG 256 (335)
+|..... . ..+.. ......+.++++|+|..+++-.. +.|..+|+...+ ....+.......... ...
T Consensus 197 wd~~~~~~~~~~~~~---------~h~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~ 265 (343)
T 3lrv_A 197 YNLSSPDQASSRFPV---------DEEAKIKEVKFADNGYWMVVECD-QTVVCFDLRKDV-GTLAYPTYTIPEFKTGTVT 265 (343)
T ss_dssp EESSCTTSCCEECCC---------CTTSCEEEEEECTTSSEEEEEES-SBEEEEETTSST-TCBSSCCCBC-----CCEE
T ss_pred EECCCCCCCccEEec---------cCCCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCCC-cceeecccccccccccceE
Confidence 9986432 2 22211 01124789999999954444443 489999998763 222221100000110 024
Q ss_pred EEEcCCCcEEEEecC-CCeEEEEEcCC
Q 039428 257 LALLSPTKLVVAGNP-YPSARLVESSD 282 (335)
Q Consensus 257 ia~d~~g~l~va~~~-~~~~~v~~~~~ 282 (335)
++++++|.++++..+ .+.+++.+...
T Consensus 266 ~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 999999987777433 57788887643
No 240
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.30 E-value=7.7e-05 Score=71.27 Aligned_cols=213 Identities=12% Similarity=-0.012 Sum_probs=110.8
Q ss_pred eeeeEEcCC---CCEEEEE-ec-C-----------CeEEEEECCCC--CCCcceeeeeEEeecC-CcCCCCcceEEEeCC
Q 039428 51 CETAKWDDV---GRRFLVS-FL-D-----------GGVGQVLVPDE--YSPGTVLEEVKLVKED-DVVGNATMGIAVDRP 111 (335)
Q Consensus 51 pegia~d~~---g~~~~~~-~~-~-----------~~I~~~d~~~g--~~~~~v~~~~~~~~~~-~~~~~~p~Gi~~d~~ 111 (335)
+-|+|++|+ .+.+|+. .. . .+|.|+...++ .... ..++..++..+ .........|++++
T Consensus 71 llgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d-~~~~~~i~~~~~~~~~H~g~~l~fgp- 148 (463)
T 2wg3_C 71 LLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVD-LRTARVFLEVAELHRKHLGGQLLFGP- 148 (463)
T ss_dssp EEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBC-GGGCEEEEEEEESSSSSCEEEEEECT-
T ss_pred ceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccC-CCCceEEEEcCCCCCcccCCcEeECC-
Confidence 457999996 3345555 32 1 37888874322 1000 00111222222 11124467899998
Q ss_pred CCeEEEEEecCCC------------CccceEEEEECCCCeE--EEEee----cCC--------CccCCCCCCceeECCC-
Q 039428 112 RNRLLVAFTDVLG------------NKYSALAAYDLSTWKR--LFLTQ----LSG--------KSEEKSTADDIAVDAE- 164 (335)
Q Consensus 112 ~g~l~v~~~D~~~------------~~~~~v~~~d~~~~~~--~~~~~----~~~--------~~~~~~~p~~~~vd~~- 164 (335)
+|.|||+..|... .....|+++|+++... ...++ +.. -..++-.|.++++|++
T Consensus 149 DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~t 228 (463)
T 2wg3_C 149 DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHP 228 (463)
T ss_dssp TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSC
T ss_pred CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCC
Confidence 8999999877542 1136799999987310 00000 000 0113568999999997
Q ss_pred ----C--cEEEEeCC-----CCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccC-------CeEEEEECCCC
Q 039428 165 ----G--NAYVTDVV-----SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPD-------GFLIVIHMCSG 226 (335)
Q Consensus 165 ----G--~lyV~d~~-----~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~d-------g~Lyvad~~~~ 226 (335)
| .+|++|.. ...|.++.+.+..- +..+.+.-+ ......|.|+++-.. |.+++++.. +
T Consensus 229 g~~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG--~~~P~~~~~--~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g 303 (463)
T 2wg3_C 229 TDININLTILCSDSNGKNRSSARILQIIKGKDYE--SEPSLLEFK--PFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-G 303 (463)
T ss_dssp SSTTCSEEEEEECC------CEEEEEEC----CC--SCCCCEECC--C----CEEEEEECCCSSCTTTTTCEEEEETT-S
T ss_pred CCcccceEEEecccCCCCCCCCeEeeeccCCCCC--CCCCeEEee--CCCCccccceEEEeCCCChhhcceEEEecCC-C
Confidence 5 56778852 23455553322110 001111110 001246889988632 458999986 7
Q ss_pred EEEEEeCCCCce--eEEEEecc-----CCcCCCCCCeEEEcCCCcEEEEec
Q 039428 227 NLFKIDIRKEEE--EVKLIELR-----GGSSLSLGDGLALLSPTKLVVAGN 270 (335)
Q Consensus 227 ~v~~~d~~~~~~--~~~~~~~~-----g~~~~~~pdGia~d~~g~l~va~~ 270 (335)
+|+++..+..+. ..+.+... .......|.+++++++|.|||+..
T Consensus 304 ~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 304 NFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp CEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEE
T ss_pred cEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEec
Confidence 899998865421 22222100 011124589999999999999964
No 241
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.28 E-value=0.002 Score=60.48 Aligned_cols=224 Identities=11% Similarity=0.077 Sum_probs=132.5
Q ss_pred ceeeeEEc--CCCCEEEEEecCCeEEEEECCCCCCCcceeeeeE------------------EeecCCcCCCCcceEEEe
Q 039428 50 LCETAKWD--DVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVK------------------LVKEDDVVGNATMGIAVD 109 (335)
Q Consensus 50 ~pegia~d--~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~------------------~~~~~~~~~~~p~Gi~~d 109 (335)
...++++. ++++.++++..++.|..||...+.. ..... .....+.. .....+ +
T Consensus 205 ~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~--~ 277 (464)
T 3v7d_B 205 TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESS----VPDHGEEHDYPLVFHTPEENPYFVGVLRGHM-ASVRTV--S 277 (464)
T ss_dssp CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCC----C------CCSSEEESCGGGCTTEEEEECCCS-SCEEEE--E
T ss_pred ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcc----cccccccCCcceEeeccCCCeEEEEEccCcc-ceEEEE--c
Confidence 44677777 5667777778889999998654431 00000 00000000 122333 4
Q ss_pred CCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccC-CcEEE
Q 039428 110 RPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVE-GQLLS 188 (335)
Q Consensus 110 ~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~-g~~~~ 188 (335)
+.+..++++..| +.|..||..+++....... . ......++++++|+..++.+..+.|..+|.. ++...
T Consensus 278 ~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~----~-~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 346 (464)
T 3v7d_B 278 GHGNIVVSGSYD------NTLIVWDVAQMKCLYILSG----H-TDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY 346 (464)
T ss_dssp EETTEEEEEETT------SCEEEEETTTTEEEEEECC----C-SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCCEEEEEeCC------CeEEEEECCCCcEEEEecC----C-CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEE
Confidence 323445553322 3599999998877644321 1 3456789999999988888888999999986 44444
Q ss_pred EecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEE
Q 039428 189 IIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVA 268 (335)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va 268 (335)
.+.. .......++++ +..+++-..++.|..+|+...+ ....... . .....+++.+++.++++
T Consensus 347 ~~~~----------h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~-~~~~~~~-~----~~~~~~~~~~~~~~l~~ 408 (464)
T 3v7d_B 347 TLQG----------HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS-RKFSYHH-T----NLSAITTFYVSDNILVS 408 (464)
T ss_dssp EECC----------CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC-EEEEEEC-T----TCCCEEEEEECSSEEEE
T ss_pred EEeC----------CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCc-eeeeecC-C----CCccEEEEEeCCCEEEE
Confidence 3321 11225667776 4555666678899999998863 2222321 1 23567888999987777
Q ss_pred ecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEEeCCeEEEE
Q 039428 269 GNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATVKDGRVYLS 314 (335)
Q Consensus 269 ~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~~~g~lyV~ 314 (335)
.. .+.+++.+...+ +.+..+..+.....+.+++.++.+.++
T Consensus 409 ~~-dg~i~iwd~~~g----~~~~~~~~~~~~~v~~v~~~~~~l~~~ 449 (464)
T 3v7d_B 409 GS-ENQFNIYNLRSG----KLVHANILKDADQIWSVNFKGKTLVAA 449 (464)
T ss_dssp EE-TTEEEEEETTTC----CEEESCTTTTCSEEEEEEEETTEEEEE
T ss_pred ec-CCeEEEEECCCC----cEEehhhccCCCcEEEEEecCCEEEEE
Confidence 55 478888887654 333322122223345677776666664
No 242
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.28 E-value=0.00077 Score=63.30 Aligned_cols=202 Identities=10% Similarity=-0.002 Sum_probs=119.8
Q ss_pred eeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEE
Q 039428 53 TAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAA 132 (335)
Q Consensus 53 gia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~ 132 (335)
.+.+ +++.++++..++.|..||..+++ .+. .+ .+.. .....+++.+ ++.+..+..| ..|..
T Consensus 127 ~~~~--~~~~l~sgs~dg~i~vwd~~~~~----~~~---~~--~~h~-~~V~~l~~~~-~~~l~s~s~d------g~i~v 187 (464)
T 3v7d_B 127 CLQF--EDNYVITGADDKMIRVYDSINKK----FLL---QL--SGHD-GGVWALKYAH-GGILVSGSTD------RTVRV 187 (464)
T ss_dssp EEEE--ETTEEEEEETTSCEEEEETTTTE----EEE---EE--CCCS-SCEEEEEECS-TTEEEEEETT------SCEEE
T ss_pred EEEE--CCCEEEEEcCCCcEEEEECCCCc----EEE---EE--eCCC-cCEEEEEEcC-CCEEEEEeCC------CCEEE
Confidence 4555 45677777889999999965444 111 22 2211 3567889986 5655443322 35999
Q ss_pred EECCCCeEEEEeecCCCccCCCCCCceeEC--CCCcEEEEeCCCCeEEEEccCCcEEE-EecCC-c----cccccc----
Q 039428 133 YDLSTWKRLFLTQLSGKSEEKSTADDIAVD--AEGNAYVTDVVSSKIWKVGVEGQLLS-IIRSP-L----FTAKEW---- 200 (335)
Q Consensus 133 ~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd--~~G~lyV~d~~~~~I~~~d~~g~~~~-~~~~~-~----~~~~~~---- 200 (335)
||.++++....... . ......+++. ++++..++.+..+.|..+|....... ..... . +..+..
T Consensus 188 wd~~~~~~~~~~~~--h---~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 188 WDIKKGCCTHVFEG--H---NSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262 (464)
T ss_dssp EETTTTEEEEEECC--C---SSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred EECCCCcEEEEECC--C---CCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence 99998876643321 1 2344566766 57788888888899999987643211 00000 0 000000
Q ss_pred --cccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEE
Q 039428 201 --YKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLV 278 (335)
Q Consensus 201 --~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~ 278 (335)
........-.++++++.++++-..++.|..+|+...+ ....+. + . ......+++++++..+++....+.+++.
T Consensus 263 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~--~-~-~~~v~~~~~~~~~~~l~sg~~dg~i~vw 337 (464)
T 3v7d_B 263 VGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK-CLYILS--G-H-TDRIYSTIYDHERKRCISASMDTTIRIW 337 (464)
T ss_dssp EEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE-EEEEEC--C-C-SSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred EEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCc-EEEEec--C-C-CCCEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 0001112233557778666666778899999998763 334443 2 1 1336789999999877775555778888
Q ss_pred EcCCC
Q 039428 279 ESSDG 283 (335)
Q Consensus 279 ~~~~~ 283 (335)
+...+
T Consensus 338 d~~~~ 342 (464)
T 3v7d_B 338 DLENG 342 (464)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 87654
No 243
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.26 E-value=9.1e-05 Score=69.05 Aligned_cols=222 Identities=9% Similarity=0.102 Sum_probs=126.9
Q ss_pred eeeeEEcCCC--CEEEEEecCCeEEEEECCCCCCCcc-----------------------ee---------eeeEEeecC
Q 039428 51 CETAKWDDVG--RRFLVSFLDGGVGQVLVPDEYSPGT-----------------------VL---------EEVKLVKED 96 (335)
Q Consensus 51 pegia~d~~g--~~~~~~~~~~~I~~~d~~~g~~~~~-----------------------v~---------~~~~~~~~~ 96 (335)
..+++|.+++ +.++++..++.|..||..++..... .. ...... ..
T Consensus 96 V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 174 (447)
T 3dw8_B 96 INKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIF-AN 174 (447)
T ss_dssp CCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEE-CS
T ss_pred eEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEe-cc
Confidence 4679999998 6777777889998888532210000 00 000000 01
Q ss_pred CcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCC-CeEEEEeecCC--CccCCCCCCceeECCCC-cEEEEeC
Q 039428 97 DVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLST-WKRLFLTQLSG--KSEEKSTADDIAVDAEG-NAYVTDV 172 (335)
Q Consensus 97 ~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~-~~~~~~~~~~~--~~~~~~~p~~~~vd~~G-~lyV~d~ 172 (335)
+ .......+++++ +++++++..| ..|..||.+. ++......... ........+.++++|+| +++++.+
T Consensus 175 ~-h~~~v~~~~~~~-~~~~l~s~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~ 246 (447)
T 3dw8_B 175 A-HTYHINSISINS-DYETYLSADD------LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS 246 (447)
T ss_dssp C-CSSCCCEEEECT-TSSEEEEECS------SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE
T ss_pred C-CCcceEEEEEcC-CCCEEEEeCC------CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEe
Confidence 1 113467899997 6776665322 4699999984 33332222211 00113456789999998 8888888
Q ss_pred CCCeEEEEccCCcE-----EEEecCCccc-c-ccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCC-CceeEEEEe
Q 039428 173 VSSKIWKVGVEGQL-----LSIIRSPLFT-A-KEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRK-EEEEVKLIE 244 (335)
Q Consensus 173 ~~~~I~~~d~~g~~-----~~~~~~~~~~-~-~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~-~~~~~~~~~ 244 (335)
..+.|..+|..... ...+....-. . ............++++|+|.++++-.. +.|..+|+.. ++ ....+.
T Consensus 247 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~-~~~~~~ 324 (447)
T 3dw8_B 247 SKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR-PVETYQ 324 (447)
T ss_dssp TTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS-CSCCEE
T ss_pred CCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc-ccceee
Confidence 88999999976432 2222211000 0 000000014789999999966555555 9999999986 32 333333
Q ss_pred ccCCc-----------CCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 245 LRGGS-----------SLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 245 ~~g~~-----------~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
..... .......+++.++|.++++....+.+++.+...+
T Consensus 325 ~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 325 VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred ccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 21100 0000123899999987777655577888887654
No 244
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.25 E-value=0.00066 Score=60.06 Aligned_cols=173 Identities=13% Similarity=0.065 Sum_probs=98.2
Q ss_pred CcceeeeEEcC--CCCEEEEEecCCeEEEEECCCCCCCc--ceeeeeEEeecCCcCCCCcceEEEeCCC-CeEEEEEecC
Q 039428 48 SFLCETAKWDD--VGRRFLVSFLDGGVGQVLVPDEYSPG--TVLEEVKLVKEDDVVGNATMGIAVDRPR-NRLLVAFTDV 122 (335)
Q Consensus 48 ~~~pegia~d~--~g~~~~~~~~~~~I~~~d~~~g~~~~--~v~~~~~~~~~~~~~~~~p~Gi~~d~~~-g~l~v~~~D~ 122 (335)
.....+++|.+ +++++++...++.|..||...+.... .... ........ ......++++++. +.++++....
T Consensus 57 ~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~--~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~d 133 (351)
T 3f3f_A 57 DSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWN--KLCTLNDS-KGSLYSVKFAPAHLGLKLACLGND 133 (351)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEE--EEEEECCC-SSCEEEEEECCGGGCSEEEEEETT
T ss_pred CCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcc--eeeeeccc-CCceeEEEEcCCCCCcEEEEecCC
Confidence 34467899998 58888877889999999865432100 0001 01111111 1356889999741 5544432221
Q ss_pred CCCccceEEEEECCCCeEE------EEeec-C-CCccCCCCCCceeECCC---CcEEEEeCCCCeEEEEccCCcEEEEec
Q 039428 123 LGNKYSALAAYDLSTWKRL------FLTQL-S-GKSEEKSTADDIAVDAE---GNAYVTDVVSSKIWKVGVEGQLLSIIR 191 (335)
Q Consensus 123 ~~~~~~~v~~~d~~~~~~~------~~~~~-~-~~~~~~~~p~~~~vd~~---G~lyV~d~~~~~I~~~d~~g~~~~~~~ 191 (335)
+.|..||..+++.. ..... . .+.........+++.|+ ++.+++....+.+...+........+.
T Consensus 134 -----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (351)
T 3f3f_A 134 -----GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAA 208 (351)
T ss_dssp -----CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEE
T ss_pred -----CcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeee
Confidence 36999998766421 00111 0 01111455677888886 776666666666655554433221110
Q ss_pred CCccccccccccccccCeEEEccCC----eEEEEECCCCEEEEEeCCC
Q 039428 192 SPLFTAKEWYKNVFGLNGIVYHPDG----FLIVIHMCSGNLFKIDIRK 235 (335)
Q Consensus 192 ~~~~~~~~~~~~~~~p~Gia~~~dg----~Lyvad~~~~~v~~~d~~~ 235 (335)
.+.. .....+.++++|++ .++++-..++.|..+|...
T Consensus 209 --~~~~-----h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 209 --KLPG-----HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp --ECCC-----CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred --ecCC-----CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 1111 11237899999998 7888877888888888765
No 245
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.25 E-value=0.0022 Score=62.90 Aligned_cols=202 Identities=15% Similarity=0.107 Sum_probs=108.1
Q ss_pred eEEEeCCCCeEEEEEecCC--------CCc--cceEEEEECCCCeEEEEeecCCCcc-CCCCCCc-eeEC--CCC---cE
Q 039428 105 GIAVDRPRNRLLVAFTDVL--------GNK--YSALAAYDLSTWKRLFLTQLSGKSE-EKSTADD-IAVD--AEG---NA 167 (335)
Q Consensus 105 Gi~~d~~~g~l~v~~~D~~--------~~~--~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~p~~-~~vd--~~G---~l 167 (335)
.+++|++.+.+|+.+.+.. ++. .+.|+.+|+++|+.++..+...... ....+.. +.++ .+| ++
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~ 318 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPL 318 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEE
Confidence 4788987899999653211 110 1359999999999987776532100 0011111 2233 356 34
Q ss_pred EEEeCCCCeEEEEccC-CcEEEEecCC----ccc-------cc----c------ccccccc--------cCeEEEccCC-
Q 039428 168 YVTDVVSSKIWKVGVE-GQLLSIIRSP----LFT-------AK----E------WYKNVFG--------LNGIVYHPDG- 216 (335)
Q Consensus 168 yV~d~~~~~I~~~d~~-g~~~~~~~~~----~~~-------~~----~------~~~~~~~--------p~Gia~~~dg- 216 (335)
++....++.++.+|++ |+.+....-. +.. .| + ....... =.+++++|+.
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g 398 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR 398 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT
T ss_pred EEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC
Confidence 5555667788888865 5544322110 000 00 0 0000001 1568999976
Q ss_pred eEEEEEC------------------------------------CCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeE-EE
Q 039428 217 FLIVIHM------------------------------------CSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGL-AL 259 (335)
Q Consensus 217 ~Lyvad~------------------------------------~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGi-a~ 259 (335)
.+|+... ..+.|+.+|+..++ .+..+.... . +.+. ..
T Consensus 399 ~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~-~~W~~~~~~-~----~~~~~~~ 472 (571)
T 2ad6_A 399 TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGK-AKWTKWEKF-A----AWGGTLY 472 (571)
T ss_dssp EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCC-EEEEEEESS-C----CCSBCEE
T ss_pred EEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCC-EEEEecCCC-C----ccceeEE
Confidence 7887642 34789999998774 333444322 1 2232 23
Q ss_pred cCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCC--CCCcceEEEE-eCCeEEEEeccCC
Q 039428 260 LSPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGP--THRVATAATV-KDGRVYLSHLLGL 319 (335)
Q Consensus 260 d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p--~~~~Pt~va~-~~g~lyV~~~~~~ 319 (335)
..++.+|+... .+.+.+++...+ +.+-++..+ ....| +++ .+|++||....+.
T Consensus 473 t~gg~v~~g~~-dg~l~a~D~~tG----~~lw~~~~~~~~~~~p--~~~~~~G~~yv~~~~G~ 528 (571)
T 2ad6_A 473 TKGGLVWYATL-DGYLKALDNKDG----KELWNFKMPSGGIGSP--MTYSFKGKQYIGSMYGV 528 (571)
T ss_dssp ETTTEEEEECT-TSEEEEEETTTC----CEEEEEECSSCCCSCC--EEEEETTEEEEEEEECC
T ss_pred ECCCEEEEEcC-CCeEEEEECCCC----CEEEEEeCCCCcEeee--EEEEECCEEEEEEECCC
Confidence 45678888643 367888887665 222222222 12222 334 5999999555444
No 246
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.21 E-value=9.2e-05 Score=66.30 Aligned_cols=202 Identities=9% Similarity=-0.015 Sum_probs=122.8
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCe--EEEEEecCCCCcc
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNR--LLVAFTDVLGNKY 127 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~--l~v~~~D~~~~~~ 127 (335)
...+++|+++++.++++..++.|..|+...+... ....... .. ......+++++ ++. |+++..|
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~---~~~~~~~-~~---~~~v~~~~~~~-~~~~~l~~~~~d------ 78 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN---VDLLQSL-RY---KHPLLCCNFID-NTDLQIYVGTVQ------ 78 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE---EEEEEEE-EC---SSCEEEEEEEE-SSSEEEEEEETT------
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc---ccceeee-ec---CCceEEEEECC-CCCcEEEEEcCC------
Confidence 4578999999998888888899988885433310 0100121 11 13568899997 455 5443222
Q ss_pred ceEEEEEC-CCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC---cEEEEecC--Ccccccccc
Q 039428 128 SALAAYDL-STWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG---QLLSIIRS--PLFTAKEWY 201 (335)
Q Consensus 128 ~~v~~~d~-~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g---~~~~~~~~--~~~~~~~~~ 201 (335)
+.|..||. ++++... +..... ......+++.+ ++.+++.+..+.|..+|... ........ ..+.
T Consensus 79 g~i~~wd~~~~~~~~~---~~~~~~-~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~----- 148 (342)
T 1yfq_A 79 GEILKVDLIGSPSFQA---LTNNEA-NLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK----- 148 (342)
T ss_dssp SCEEEECSSSSSSEEE---CBSCCC-CSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-----
T ss_pred CeEEEEEeccCCceEe---ccccCC-CCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-----
Confidence 35999999 8876532 211001 34567899999 88888888889999998653 00000000 0111
Q ss_pred ccccccCeEEEccCCeEEEEECCCCEEEEEeCCC-CceeEEEEeccCCcCCCCCCeEEEcC-CCcEEEEecCCCeEEEEE
Q 039428 202 KNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRK-EEEEVKLIELRGGSSLSLGDGLALLS-PTKLVVAGNPYPSARLVE 279 (335)
Q Consensus 202 ~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~-~~~~~~~~~~~g~~~~~~pdGia~d~-~g~l~va~~~~~~~~v~~ 279 (335)
....+..+++++++ +++ -..++.|..+|... ............ -.....+++.+ +++++++....+.+++.+
T Consensus 149 -~~~~v~~~~~~~~~-l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~---~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~ 222 (342)
T 1yfq_A 149 -VKNKIFTMDTNSSR-LIV-GMNNSQVQWFRLPLCEDDNGTIEESGL---KYQIRDVALLPKEQEGYACSSIDGRVAVEF 222 (342)
T ss_dssp -SCCCEEEEEECSSE-EEE-EESTTEEEEEESSCCTTCCCEEEECSC---SSCEEEEEECSGGGCEEEEEETTSEEEEEE
T ss_pred -eCCceEEEEecCCc-EEE-EeCCCeEEEEECCccccccceeeecCC---CCceeEEEECCCCCCEEEEEecCCcEEEEE
Confidence 12347889999887 444 45778999999987 421222222211 12367899999 888777755456777755
Q ss_pred cC
Q 039428 280 SS 281 (335)
Q Consensus 280 ~~ 281 (335)
..
T Consensus 223 ~~ 224 (342)
T 1yfq_A 223 FD 224 (342)
T ss_dssp CC
T ss_pred Ec
Confidence 54
No 247
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.20 E-value=0.00013 Score=65.75 Aligned_cols=180 Identities=12% Similarity=0.119 Sum_probs=106.0
Q ss_pred eeEEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCC--------
Q 039428 53 TAKWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVL-------- 123 (335)
Q Consensus 53 gia~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~-------- 123 (335)
|...-.++.+||.. ...++|++++. +|.-+ . .++.. .+.-|.++ ++.||.+.....
T Consensus 19 g~~~~~g~~iy~~n~~d~~~ly~~~~-dg~~~----~---~l~~~-----~~~~i~~~--g~~Iyy~~~~~~~~~~~~~~ 83 (302)
T 3s25_A 19 GLFCESDGEVFFSNTNDNGRLYAMNI-DGSNI----H---KLSND-----TAMYINAD--KNYVYYVRNNNQKITSQTFF 83 (302)
T ss_dssp TCEEEETTEEEEEEGGGTTEEEEEET-TSCSC----E---EEEEE-----EEEEEEEC--SSEEEEEEECC------CCS
T ss_pred eEEEEeCCEEEEEeCCCCceEEEEcC-CCCCC----E---EccCC-----ceeeEEEc--CCEEEEEECCCCccccccee
Confidence 33333334455554 45789999985 56521 1 22221 24456554 688887643210
Q ss_pred -CCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCC-cEEEEe---CCCCeEEEEccCCcEEEEecCCccccc
Q 039428 124 -GNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEG-NAYVTD---VVSSKIWKVGVEGQLLSIIRSPLFTAK 198 (335)
Q Consensus 124 -~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G-~lyV~d---~~~~~I~~~d~~g~~~~~~~~~~~~~~ 198 (335)
.++ ..|++++.++++.....+. . +.++.++| .+|+++ .....|++++.+|+..+.+-..
T Consensus 84 ~~n~-~~Iy~i~~dg~~~~~l~~~------~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~----- 147 (302)
T 3s25_A 84 SYDR-NSLCRIKRNGHGSTVLDPD------P----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNH----- 147 (302)
T ss_dssp SCCS-EEEEEEETTSCCCEEEECS------C----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESS-----
T ss_pred ccCC-CeEEEEeCCCCcceEeecC------C----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCC-----
Confidence 011 5799999998765433221 1 12444454 699998 6788999999998654433211
Q ss_pred cccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCC-CcEEEEecCC-CeE
Q 039428 199 EWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSP-TKLVVAGNPY-PSA 275 (335)
Q Consensus 199 ~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~-g~l~va~~~~-~~~ 275 (335)
..++++++| +||+++.+..+|+++++++. ..+.+. .+ +....+.|+ +.||.++... ..+
T Consensus 148 ---------~~~~~~~~g~~iy~t~~g~~~Iy~~~l~g~--~~~~l~-~~------~~~~~~~P~g~~iy~t~~~~~~~I 209 (302)
T 3s25_A 148 ---------YLFTCNTSDRYFYYNNPKNGQLYRYDTASQ--SEALFY-DC------NCYKPVVLDDTNVYYMDVNRDNAI 209 (302)
T ss_dssp ---------CCCCSEEETTEEEEECTTTCCEEEEETTTT--EEEEEE-CS------CEEEEEEEETTEEEEEEGGGTTEE
T ss_pred ---------CceEeeEECCEEEEEeCCCceEEEEECCCC--CEEEEe-CC------CccceeeecCCEEEEEEcCCCcEE
Confidence 013457777 99999988899999999987 444442 23 222345555 4677775421 356
Q ss_pred EEEEcC
Q 039428 276 RLVESS 281 (335)
Q Consensus 276 ~v~~~~ 281 (335)
.++..+
T Consensus 210 ~~~~ld 215 (302)
T 3s25_A 210 VHVNIN 215 (302)
T ss_dssp EEECSS
T ss_pred EEEECC
Confidence 555543
No 248
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.20 E-value=0.00032 Score=63.10 Aligned_cols=189 Identities=8% Similarity=0.078 Sum_probs=109.8
Q ss_pred CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCC
Q 039428 70 GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGK 149 (335)
Q Consensus 70 ~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 149 (335)
..|++++. ++.. .+ .+...+ +..+.+.++.||.+..+..+. ..|++++.++........-
T Consensus 88 ~~Iy~i~~-dg~~----~~--~l~~~~--------~~~~s~~g~~Iy~~~~~~~~~--~~Iy~~~~dGs~~~~lt~~--- 147 (302)
T 3s25_A 88 NSLCRIKR-NGHG----ST--VLDPDP--------CIYASLIGNYIYYLHYDTQTA--TSLYRIRIDGEEKKKIKNH--- 147 (302)
T ss_dssp EEEEEEET-TSCC----CE--EEECSC--------EEEEEEETTEEEEEEESSSSC--EEEEEEETTSCCCEEEESS---
T ss_pred CeEEEEeC-CCCc----ce--EeecCC--------ccEEEEeCCEEEEEeecCCCC--ceEEEEECCCCCeEEEeCC---
Confidence 57999985 4541 11 132111 223444478898853101112 4699999987654433221
Q ss_pred ccCCCCCCceeECCCC-cEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCC-C
Q 039428 150 SEEKSTADDIAVDAEG-NAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCS-G 226 (335)
Q Consensus 150 ~~~~~~p~~~~vd~~G-~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~-~ 226 (335)
.. .+++++| +||+++....+|++.+.+|+..+.+-. . +..++++|++ +||+++... .
T Consensus 148 ---~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~----~---------~~~~~~~P~g~~iy~t~~~~~~ 207 (302)
T 3s25_A 148 ---YL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD----C---------NCYKPVVLDDTNVYYMDVNRDN 207 (302)
T ss_dssp ---CC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC----S---------CEEEEEEEETTEEEEEEGGGTT
T ss_pred ---Cc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC----C---------CccceeeecCCEEEEEEcCCCc
Confidence 11 3456665 699998888999999999876554311 1 1224567766 999999764 5
Q ss_pred EEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCC-cEEEE-ecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEE
Q 039428 227 NLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPT-KLVVA-GNPYPSARLVESSDGWETASVVAKFNGPTHRVATAA 304 (335)
Q Consensus 227 ~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g-~l~va-~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~v 304 (335)
+|+|.++++. ..+.+. .. . + | .++++| .||.+ +...+.+..+..+ |.....+... . ..++
T Consensus 208 ~I~~~~ldG~--~~~~Lt-~~-~-~--~---~~~~~g~~Iy~~~~~~~~~i~~~~~D-G~~r~~l~~~------~-~~~i 269 (302)
T 3s25_A 208 AIVHVNINNP--NPVVLT-EA-N-I--E---HYNVYGSLIFYQRGGDNPALCVVKND-GTGFKELAKG------E-FCNI 269 (302)
T ss_dssp EEEEECSSSC--CCEECS-CS-C-E--E---EEEEETTEEEEEECSSSCEEEEEETT-SCCCEEEEES------C-EEEE
T ss_pred EEEEEECCCC--CeEEEe-CC-C-c--c---eEEECCCEEEEEECCCCcEEEEEECC-CCccEEeeCC------c-cceE
Confidence 9999999987 344442 22 1 1 2 356655 56665 4434567777664 3222222221 1 1256
Q ss_pred EEeCCeEEEEec
Q 039428 305 TVKDGRVYLSHL 316 (335)
Q Consensus 305 a~~~g~lyV~~~ 316 (335)
++.++.||.+++
T Consensus 270 ~i~~d~Iy~td~ 281 (302)
T 3s25_A 270 NVTSQYVYFTDF 281 (302)
T ss_dssp EECSSEEEEEET
T ss_pred EEeCCEEEEEEC
Confidence 667888888764
No 249
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.20 E-value=0.00058 Score=61.75 Aligned_cols=195 Identities=12% Similarity=0.048 Sum_probs=119.3
Q ss_pred cCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcC--CCCcceEEEeCCCCeEEEEEecCCCCccceEEEEE
Q 039428 57 DDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVV--GNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYD 134 (335)
Q Consensus 57 d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~--~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d 134 (335)
..++++++++..++.|..||..+++. +.. + ..+... ...|. +.....++.+.+- +.. ..+..+|
T Consensus 45 ~~d~~~l~sg~~Dg~v~iwd~~~~~~----~~~--~-~~~~v~~~~~~~~-~~s~s~D~~i~~w--~~~----~~~~~~~ 110 (343)
T 3lrv_A 45 YYDKWVCMCRCEDGALHFTQLKDSKT----ITT--I-TTPNPRTGGEHPA-IISRGPCNRLLLL--YPG----NQITILD 110 (343)
T ss_dssp SEEEEEEEEEEETTEEEEEEESSSSC----EEE--E-EEECCCTTCCCCS-EEEECSTTEEEEE--ETT----TEEEEEE
T ss_pred cCCCCEEEEECCCCcEEEEECCCCcE----EEE--E-ecCCceeeeeCCc-eEEecCCCeEEEE--Ecc----CceEEee
Confidence 34566777778899999999755542 221 1 111110 01223 3222235555552 221 2366677
Q ss_pred CCCCeEEEEeecCCCccCCCCCCceeECC--CCcEEEEeCCCCeEEEEccCCcEE-EEecCCccccccccccccccCeEE
Q 039428 135 LSTWKRLFLTQLSGKSEEKSTADDIAVDA--EGNAYVTDVVSSKIWKVGVEGQLL-SIIRSPLFTAKEWYKNVFGLNGIV 211 (335)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~p~~~~vd~--~G~lyV~d~~~~~I~~~d~~g~~~-~~~~~~~~~~~~~~~~~~~p~Gia 211 (335)
..+++......... ......++++| +|+.+++.+..+.|..+|...... ...... .......++
T Consensus 111 ~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~---------~~~~i~~~~ 177 (343)
T 3lrv_A 111 SKTNKVLREIEVDS----ANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK---------SDVEYSSGV 177 (343)
T ss_dssp TTTCCEEEEEECCC----SSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC---------SSCCCCEEE
T ss_pred cCCcceeEEeecCC----CCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC---------CCCceEEEE
Confidence 77776543332211 23467899999 999999888899999999874433 222110 112378999
Q ss_pred EccCCeEEEEECCCCEEEEEeCCCCceeE-EEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 212 YHPDGFLIVIHMCSGNLFKIDIRKEEEEV-KLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 212 ~~~dg~Lyvad~~~~~v~~~d~~~~~~~~-~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
++|+|.++++-..++.|..+|+..++ .. ..+.. .+ -.....+++.++|.++++... +.+++.+....
T Consensus 178 ~~pdg~~lasg~~dg~i~iwd~~~~~-~~~~~~~~--~h-~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~ 245 (343)
T 3lrv_A 178 LHKDSLLLALYSPDGILDVYNLSSPD-QASSRFPV--DE-EAKIKEVKFADNGYWMVVECD-QTVVCFDLRKD 245 (343)
T ss_dssp ECTTSCEEEEECTTSCEEEEESSCTT-SCCEECCC--CT-TSCEEEEEECTTSSEEEEEES-SBEEEEETTSS
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCC-CCccEEec--cC-CCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCC
Confidence 99999888888889999999998874 23 34432 11 133678999999987776442 57888876543
No 250
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.18 E-value=0.00012 Score=73.05 Aligned_cols=152 Identities=8% Similarity=0.017 Sum_probs=83.0
Q ss_pred cceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEE-eCCCC-----
Q 039428 103 TMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVT-DVVSS----- 175 (335)
Q Consensus 103 p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~-d~~~~----- 175 (335)
...++++| +|++++...+.... ...|+.+|.++++..........+.-...+..+++.|||+ ++++ ....+
T Consensus 257 ~~~~~~Sp-Dg~~l~~~~~~~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 334 (723)
T 1xfd_A 257 ITMVKWAT-STKVAVTWLNRAQN-VSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKF 334 (723)
T ss_dssp EEEEEESS-SSEEEEEEEETTSC-EEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCE
T ss_pred eEEEEEeC-CCeEEEEEEcCCCC-eEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcce
Confidence 45688997 67666543332222 1569999999887653322111000001124789999997 5553 43334
Q ss_pred -eEEEEc-cCCcE---EEEecCCccccccccccccccCeEEEccCC-eEEEEECC----CCEEEEEeCCCCceeEEEEec
Q 039428 176 -KIWKVG-VEGQL---LSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMC----SGNLFKIDIRKEEEEVKLIEL 245 (335)
Q Consensus 176 -~I~~~d-~~g~~---~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~----~~~v~~~d~~~~~~~~~~~~~ 245 (335)
.|+.+| .+++. .+. +... .......++++||| .||++... ..+||+++.++.. ....+
T Consensus 335 ~~l~~~d~~~~~~~~~~~~-----l~~~----~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~-~~~~l-- 402 (723)
T 1xfd_A 335 YHITVSSSQPNSSNDNIQS-----ITSG----DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNF-NRQCL-- 402 (723)
T ss_dssp EEEEEECSSCCSSSCCCCB-----SCCS----SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTC-CCBCS--
T ss_pred eEEEEEeccCCCCccceeE-----eecC----CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCC-Cccee--
Confidence 799998 45433 221 1110 00012236899999 78766554 3578988877641 12222
Q ss_pred cCCc-CCCCCCeEEEcCCCcEEEE
Q 039428 246 RGGS-SLSLGDGLALLSPTKLVVA 268 (335)
Q Consensus 246 ~g~~-~~~~pdGia~d~~g~l~va 268 (335)
.+.. .......+++.++|+.++.
T Consensus 403 ~~~~~~~~~~~~~~~spdg~~l~~ 426 (723)
T 1xfd_A 403 SCDLVENCTYFSASFSHSMDFFLL 426 (723)
T ss_dssp STTSSSSCCCCEEEECTTSSEEEE
T ss_pred cccccCCCCeEEEEECCCCCEEEE
Confidence 1100 0123567999999975555
No 251
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.17 E-value=0.00041 Score=63.34 Aligned_cols=166 Identities=12% Similarity=0.043 Sum_probs=100.3
Q ss_pred ceeeeEEcC-CCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCC--CCeEEEEEecCCCCc
Q 039428 50 LCETAKWDD-VGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRP--RNRLLVAFTDVLGNK 126 (335)
Q Consensus 50 ~pegia~d~-~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~--~g~l~v~~~D~~~~~ 126 (335)
...+++|.+ ++++++++..++.|..||..+++ ... ....+ .....+.+.+. ++.++++.. ..
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~----~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~--- 165 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ----TAD---VFNFE----ETVYSHHMSPVSTKHCLVAVGT-RG--- 165 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTE----EEE---EEECS----SCEEEEEECSSCSSCCEEEEEE-SS---
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc----cce---eccCC----CceeeeEeecCCCCCcEEEEEc-CC---
Confidence 457889999 66677776789999999965443 111 22222 23456777652 223444322 21
Q ss_pred cceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCCcE--EEEecCCc--cc-cc--
Q 039428 127 YSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEGQL--LSIIRSPL--FT-AK-- 198 (335)
Q Consensus 127 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g~~--~~~~~~~~--~~-~~-- 198 (335)
+.|..||.++++....... . ......+++.|++. ++++....+.|..+|..... ...+.... .. ..
T Consensus 166 -~~v~~~d~~~~~~~~~~~~----~-~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 239 (408)
T 4a11_B 166 -PKVQLCDLKSGSCSHILQG----H-RQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVES 239 (408)
T ss_dssp -SSEEEEESSSSCCCEEECC----C-CSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTT
T ss_pred -CeEEEEeCCCcceeeeecC----C-CCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecc
Confidence 3599999987765433221 1 34567899999987 78787888899999976322 11111000 00 00
Q ss_pred cccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCC
Q 039428 199 EWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKE 236 (335)
Q Consensus 199 ~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~ 236 (335)
...........++++|++..+++-..++.|..+|+...
T Consensus 240 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 277 (408)
T 4a11_B 240 ANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNG 277 (408)
T ss_dssp SSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred ccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCC
Confidence 00112234788999999966666667788888888764
No 252
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.16 E-value=0.00017 Score=75.66 Aligned_cols=208 Identities=13% Similarity=0.027 Sum_probs=115.4
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecC--C--C
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDV--L--G 124 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~--~--~ 124 (335)
..+..++|+|+|+.+++....+.|+.+|..+++ .. .+..... .....++++|++..|..+..+. . .
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~-----~~--~~~~~~~---~~v~~~~~SpDG~~la~~~~~~~~~~~~ 448 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK-----PT--VIERSRE---AMITDFTISDNSRFIAYGFPLKHGETDG 448 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTTCC-----EE--EEEECSS---SCCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCCCc-----eE--EeccCCC---CCccceEECCCCCeEEEEecCccccccC
Confidence 456899999999988877778899999975554 12 1321111 2347899998434444432221 0 0
Q ss_pred CccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCC-CeEEEE------ccCCcEEEE--ecCC-
Q 039428 125 NKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVS-SKIWKV------GVEGQLLSI--IRSP- 193 (335)
Q Consensus 125 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~-~~I~~~------d~~g~~~~~--~~~~- 193 (335)
.....|+.||.++++... +... ......+++++||+ +|++.... ..++.. -..+..... +...
T Consensus 449 ~~~~~i~l~d~~~g~~~~---l~~~---~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (1045)
T 1k32_A 449 YVMQAIHVYDMEGRKIFA---ATTE---NSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGS 522 (1045)
T ss_dssp CCEEEEEEEETTTTEEEE---CSCS---SSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTC
T ss_pred CCCCeEEEEECCCCcEEE---eeCC---CcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCC
Confidence 111469999999887432 2111 33456689999996 66554321 111110 000111000 0000
Q ss_pred --c--c------------cccc------c-cccccccCeEEEccCCeEEEE-------------ECCCCEEEEEeCCCCc
Q 039428 194 --L--F------------TAKE------W-YKNVFGLNGIVYHPDGFLIVI-------------HMCSGNLFKIDIRKEE 237 (335)
Q Consensus 194 --~--~------------~~~~------~-~~~~~~p~Gia~~~dg~Lyva-------------d~~~~~v~~~d~~~~~ 237 (335)
. | ...+ . ........++++++||.+|+. .....+|+++|..++
T Consensus 523 ~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~- 601 (1045)
T 1k32_A 523 PNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTR- 601 (1045)
T ss_dssp CCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTC-
T ss_pred CCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCC-
Confidence 0 0 0000 0 001123578999999976653 233568999999887
Q ss_pred eeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEecCCCeEEEEEcCCC
Q 039428 238 EEVKLIELRGGSSLSLGDGLALLSPTK-LVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 238 ~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~~~~~~~~v~~~~~~ 283 (335)
....+. . . +..+++.+||+ |++++. +.+++++...+
T Consensus 602 -~~~~l~-~--~----v~~~~~S~DG~~l~~~~~--~~i~~~d~~~~ 638 (1045)
T 1k32_A 602 -KVTEVK-N--N----LTDLRLSADRKTVMVRKD--DGKIYTFPLEK 638 (1045)
T ss_dssp -CEEEEE-E--E----EEEEEECTTSCEEEEEET--TSCEEEEESSC
T ss_pred -cEEEee-c--C----cceEEECCCCCEEEEEcC--CcEEEEeCccC
Confidence 334333 1 1 56789999996 555555 46888876544
No 253
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.16 E-value=0.0024 Score=63.87 Aligned_cols=203 Identities=15% Similarity=0.126 Sum_probs=108.2
Q ss_pred ceEEEeCCCCeEEEEEecCC-----------CCc--cceEEEEECCCCeEEEEeecCCCcc----CCCCCCceeECCCC-
Q 039428 104 MGIAVDRPRNRLLVAFTDVL-----------GNK--YSALAAYDLSTWKRLFLTQLSGKSE----EKSTADDIAVDAEG- 165 (335)
Q Consensus 104 ~Gi~~d~~~g~l~v~~~D~~-----------~~~--~~~v~~~d~~~~~~~~~~~~~~~~~----~~~~p~~~~vd~~G- 165 (335)
..+++|++.+.||+.+.+.. ++. ...|+.+|+++|++++......... ....|.=+....+|
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 46889988899999653310 100 1259999999999997766532100 01112111111245
Q ss_pred --cEEEEeCCCCeEEEEccC-CcEEEEecCC---cc-----------------------ccccccccccccCeEEEccCC
Q 039428 166 --NAYVTDVVSSKIWKVGVE-GQLLSIIRSP---LF-----------------------TAKEWYKNVFGLNGIVYHPDG 216 (335)
Q Consensus 166 --~lyV~d~~~~~I~~~d~~-g~~~~~~~~~---~~-----------------------~~~~~~~~~~~p~Gia~~~dg 216 (335)
.+++....++.|+.+|.+ |+.+..+... +. ..|. ......-.+++++|++
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~-~~G~~~w~~~a~dp~~ 404 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPG-PYGAHNWHPMSFNPQT 404 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSC-TTCSSCSSCCEEETTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcC-cccccCCCCceEcCCC
Confidence 455555667888888875 5544322110 00 0000 0001112478999976
Q ss_pred -eEEEEEC------------------------------------------CCCEEEEEeCCCCceeEEEEeccCCcCCCC
Q 039428 217 -FLIVIHM------------------------------------------CSGNLFKIDIRKEEEEVKLIELRGGSSLSL 253 (335)
Q Consensus 217 -~Lyvad~------------------------------------------~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~ 253 (335)
.+|+... ..+.|..+|+.+++ .+..+.... .
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~-~~W~~~~~~----~- 478 (677)
T 1kb0_A 405 GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK-AAWSVEHVS----P- 478 (677)
T ss_dssp TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTE-EEEEEEESS----S-
T ss_pred CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCc-EEeecCCCC----C-
Confidence 7777532 12789999998874 333344321 1
Q ss_pred CCeEEEc-CCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEE-eCCeEEEEeccC
Q 039428 254 GDGLALL-SPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATV-KDGRVYLSHLLG 318 (335)
Q Consensus 254 pdGia~d-~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~-~~g~lyV~~~~~ 318 (335)
..|..+. .++.+|+. ...+.+++++...+ +.+-.+..+....-+-+++ .+|+.||+...|
T Consensus 479 ~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG----~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G 540 (677)
T 1kb0_A 479 WNGGTLTTAGNVVFQG-TADGRLVAYHAATG----EKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVG 540 (677)
T ss_dssp CCCCEEEETTTEEEEE-CTTSEEEEEETTTC----CEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CcCcceEeCCCEEEEE-CCCCcEEEEECCCC----ceeeeeeCCCCcccCCEEEEeCCEEEEEEecc
Confidence 2333344 44567776 33477888887765 3333333232222223555 488988855444
No 254
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.13 E-value=0.00083 Score=63.42 Aligned_cols=242 Identities=10% Similarity=0.050 Sum_probs=132.5
Q ss_pred ceeeeEEcCCCCEEEE---E-ecCCeEEEEECCCCC----CCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEec
Q 039428 50 LCETAKWDDVGRRFLV---S-FLDGGVGQVLVPDEY----SPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTD 121 (335)
Q Consensus 50 ~pegia~d~~g~~~~~---~-~~~~~I~~~d~~~g~----~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D 121 (335)
...+++|+++|+.+++ + ..++.|..||..+.. ...+.+.. +....+. ......++++|.+++++++...
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~--~~~~~~h-~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAY--HKLLKDA-GGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEE--EECCCSG-GGSEEEEEECSSCTTEEEEEET
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeee--eeccCCC-CCceEEEEECCCCCCEEEEEEC
Confidence 3689999999998886 4 557889999853220 00000110 1111111 1357899999854666664332
Q ss_pred CCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCcccccccc
Q 039428 122 VLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWY 201 (335)
Q Consensus 122 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~ 201 (335)
. +.|..||.+++........ . ....+.++++|+|+..++.+..+.|..+|.+++....+..+....+
T Consensus 171 D-----g~v~iwD~~~~~~~~~~~~----~-~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~--- 237 (434)
T 2oit_A 171 D-----GSIAVLQVTETVKVCATLP----S-TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYES--- 237 (434)
T ss_dssp T-----SCEEEEEESSSEEEEEEEC----G-GGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCT---
T ss_pred C-----CeEEEEEcCCCcceeeccC----C-CCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCC---
Confidence 1 3599999988754422211 1 3457789999999877777788999999998665543321110000
Q ss_pred ccccccCeEEEccCCe-EEEEECCCC------EEEEEeCCCCce--eEEEEeccCC-c--CCCCCCeEEEc--CCC-cEE
Q 039428 202 KNVFGLNGIVYHPDGF-LIVIHMCSG------NLFKIDIRKEEE--EVKLIELRGG-S--SLSLGDGLALL--SPT-KLV 266 (335)
Q Consensus 202 ~~~~~p~Gia~~~dg~-Lyvad~~~~------~v~~~d~~~~~~--~~~~~~~~g~-~--~~~~pdGia~d--~~g-~l~ 266 (335)
........+++++++. +.+.....+ .+..+++...+. ........+- . ....+..+.+. ++. .++
T Consensus 238 ~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~ 317 (434)
T 2oit_A 238 DHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVL 317 (434)
T ss_dssp TSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEE
T ss_pred CCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEE
Confidence 0112467889998873 333333332 366666654310 1111111110 0 01122344444 554 567
Q ss_pred EEecCCCeEEEEEcCC---CcEEEEEeee--ecCC-----CCCcceEEEEe
Q 039428 267 VAGNPYPSARLVESSD---GWETASVVAK--FNGP-----THRVATAATVK 307 (335)
Q Consensus 267 va~~~~~~~~v~~~~~---~~~~~~~~~~--~~~p-----~~~~Pt~va~~ 307 (335)
+++..++.+.++...+ .|......+. ...| .-.+|.+++++
T Consensus 318 v~s~~s~dv~vl~~~~~~~~~~~~~~~d~~ra~lP~~~~~~dt~piG~~~d 368 (434)
T 2oit_A 318 AASAASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVD 368 (434)
T ss_dssp EEETTCSBCEEEEECTTSSCEEEEEECGGGCCBCCBCTTSCBCCEEEEEEE
T ss_pred EecCCCCceeEEEecCCCCccEEEeccccccccccCCCCCCCceeeEEEEE
Confidence 7777677777776543 3655443322 1223 25667888885
No 255
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.13 E-value=0.00077 Score=60.75 Aligned_cols=206 Identities=10% Similarity=0.030 Sum_probs=113.9
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
...+++|+|+|+.+++...+++|..||....... .+....+.... .....++++| ++.++++.... ..
T Consensus 109 ~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~---~~~~~~~~~h~---~~v~~v~~~p-~~~~l~s~s~D-----~~ 176 (330)
T 2hes_X 109 EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE---YECISVLQEHS---QDVKHVIWHP-SEALLASSSYD-----DT 176 (330)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCC---CEEEEEECCCS---SCEEEEEECS-SSSEEEEEETT-----SC
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCC---eEEEEEeccCC---CceEEEEECC-CCCEEEEEcCC-----Ce
Confidence 3568999999998877788999999985322110 11101221111 2567899998 55555543221 35
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCC--CcEEEEeCCCCeEEEEccCCc-----EE-EEecCCcccccccc
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE--GNAYVTDVVSSKIWKVGVEGQ-----LL-SIIRSPLFTAKEWY 201 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~--G~lyV~d~~~~~I~~~d~~g~-----~~-~~~~~~~~~~~~~~ 201 (335)
|..||..++.......+.+. ....+.++++++ +...++.+..+.|..++..+. .. ... ..+..
T Consensus 177 i~iW~~~~~~~~~~~~~~~h---~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~--~~~~~---- 247 (330)
T 2hes_X 177 VRIWKDYDDDWECVAVLNGH---EGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCE--AILPD---- 247 (330)
T ss_dssp EEEEEEETTEEEEEEEECCC---SSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEE--EECCS----
T ss_pred EEEEECCCCCeeEEEEccCC---CCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEe--eeccc----
Confidence 88888766533222223211 345677899998 667777777788888776432 00 000 00100
Q ss_pred ccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEE-ec-cCCcCCCCCCeEEEcC--CCcEEEEecCCCeEEE
Q 039428 202 KNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLI-EL-RGGSSLSLGDGLALLS--PTKLVVAGNPYPSARL 277 (335)
Q Consensus 202 ~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~-~~-~g~~~~~~pdGia~d~--~g~l~va~~~~~~~~v 277 (335)
........+++++++.| ++-..++.|..++...+ ..+.+ .. .+ ........+++.+ +++++++....+.+++
T Consensus 248 ~h~~~v~~v~~s~~~~l-~s~~~dg~v~iw~~~~~--~~~~~~~~~~~-h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~ 323 (330)
T 2hes_X 248 VHKRQVYNVAWGFNGLI-ASVGADGVLAVYEEVDG--EWKVFAKRALC-HGVYEINVVKWLELNGKTILATGGDDGIVNF 323 (330)
T ss_dssp CCSSCEEEEEECTTSCE-EEEETTSCEEEEEEETT--EEEEEEEESCT-TTTSCEEEEEEC-----CCEEEEETTSEEEE
T ss_pred ccccceEEEEEcCCCEE-EEEeCCCEEEEEEcCCC--ceEEEeccccc-cccceEEEEEEecCCCceEEEEecCCCcEEE
Confidence 01123678999976654 45556788888887665 22222 11 12 1111245677877 5676666544466776
Q ss_pred EEc
Q 039428 278 VES 280 (335)
Q Consensus 278 ~~~ 280 (335)
.+.
T Consensus 324 W~~ 326 (330)
T 2hes_X 324 WSL 326 (330)
T ss_dssp EEC
T ss_pred EEe
Confidence 654
No 256
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.13 E-value=0.0026 Score=59.22 Aligned_cols=202 Identities=6% Similarity=-0.032 Sum_probs=119.9
Q ss_pred CcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 48 SFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
...-.+++|+++|+.++++..++.|..||..+++ .+. ...... .....+..+ +.+.++....
T Consensus 147 ~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~----~~~---~~~~h~---~~v~~~s~~---~~~l~sgs~d----- 208 (420)
T 4gga_A 147 GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK----RLR---NMTSHS---ARVGSLSWN---SYILSSGSRS----- 208 (420)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE----EEE---EECCCS---SCEEEEEEE---TTEEEEEETT-----
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc----EEE---EEeCCC---CceEEEeeC---CCEEEEEeCC-----
Confidence 3346799999999988888889999999965443 111 221111 234455554 3444432211
Q ss_pred ceEEEEECCCCeEE-EEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccc
Q 039428 128 SALAAYDLSTWKRL-FLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 128 ~~v~~~d~~~~~~~-~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (335)
..+..+|....... ..... . ......+.+.++|+..++....+.|..++........ ..... .......
T Consensus 209 ~~i~~~d~~~~~~~~~~~~~----h-~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~---~~~~~--~~~~~~~ 278 (420)
T 4gga_A 209 GHIHHHDVRVAEHHVATLSG----H-SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW---VPLQT--FTQHQGA 278 (420)
T ss_dssp SEEEEEETTSSSCEEEEEEC----C-SSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCS---CCSEE--ECCCSSC
T ss_pred CceeEeeecccceeeEEecc----c-ccceeeeeecCCCCeeeeeeccccceEEeeccccccc---eeeee--ecccCCc
Confidence 35888887754322 21111 1 3456678899999988888888888888865321100 00000 0001123
Q ss_pred cCeEEEccCC-eEEEEE--CCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEE-e-cCCCeEEEEEcC
Q 039428 207 LNGIVYHPDG-FLIVIH--MCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVA-G-NPYPSARLVESS 281 (335)
Q Consensus 207 p~Gia~~~dg-~Lyvad--~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va-~-~~~~~~~v~~~~ 281 (335)
...++++|++ .++++- +.++.|..+|+..++ ....+... .....+.+.+++..+++ . ...+.+++.+..
T Consensus 279 V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~-~~~~~~~~-----~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~ 352 (420)
T 4gga_A 279 VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-CLSAVDAH-----SQVCSILWSPHYKELISGHGFAQNQLVIWKYP 352 (420)
T ss_dssp EEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE-EEEEEECS-----SCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred eeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc-cceeeccc-----cceeeeeecCCCCeEEEEEecCCCEEEEEECC
Confidence 6788999976 665443 356889999998874 44444422 22567788888765554 2 234678888876
Q ss_pred CC
Q 039428 282 DG 283 (335)
Q Consensus 282 ~~ 283 (335)
.+
T Consensus 353 ~~ 354 (420)
T 4gga_A 353 TM 354 (420)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 257
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.12 E-value=0.00014 Score=73.58 Aligned_cols=208 Identities=7% Similarity=-0.020 Sum_probs=123.6
Q ss_pred ceeeeEEcCC--CCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCC-CeEEEEEecCCCCc
Q 039428 50 LCETAKWDDV--GRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPR-NRLLVAFTDVLGNK 126 (335)
Q Consensus 50 ~pegia~d~~--g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~-g~l~v~~~D~~~~~ 126 (335)
...+++|+++ ++.++++..++.|..||..+++ ... ....... ......++++++. +.++++....
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~-----~~~--~~~~~~h-~~~V~~v~~sp~~~~~~l~sgs~d---- 122 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR-----WSQ--IAVHAVH-SASVNSVQWAPHEYGPLLLVASSD---- 122 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE-----EEE--EEEECCC-SSCEEEEEECCGGGCSEEEEEETT----
T ss_pred ceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc-----ccc--cccccCC-CCCeEEEEECCCCCCCEEEEEeCC----
Confidence 4578999887 8888888889999999864443 111 1111111 1356889999741 5555542221
Q ss_pred cceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC-------------CCcEEEEeCCCCeEEEEccCCc--EEEEec
Q 039428 127 YSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-------------EGNAYVTDVVSSKIWKVGVEGQ--LLSIIR 191 (335)
Q Consensus 127 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-------------~G~lyV~d~~~~~I~~~d~~g~--~~~~~~ 191 (335)
+.|..||..++.......... . ......++++| +|+.+++.+..+.|..+|.... ......
T Consensus 123 -g~I~vwdl~~~~~~~~~~~~~--~-~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 198 (753)
T 3jro_A 123 -GKVSVVEFKENGTTSPIIIDA--H-AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES 198 (753)
T ss_dssp -SEEEEEECCSSSCCCCEEEEC--C-SSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEE
T ss_pred -CcEEEEEeecCCCcceeEeec--C-CCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeee
Confidence 369999987763211011111 1 24456788887 5777777788888988886532 111110
Q ss_pred CCccccccccccccccCeEEEccC---CeEEEEECCCCEEEEEeCCCCcee-EEEEeccCCcCCCCCCeEEEcCCCcEEE
Q 039428 192 SPLFTAKEWYKNVFGLNGIVYHPD---GFLIVIHMCSGNLFKIDIRKEEEE-VKLIELRGGSSLSLGDGLALLSPTKLVV 267 (335)
Q Consensus 192 ~~~~~~~~~~~~~~~p~Gia~~~d---g~Lyvad~~~~~v~~~d~~~~~~~-~~~~~~~g~~~~~~pdGia~d~~g~l~v 267 (335)
.+.. .......++++|+ +.++++-..++.|..+|...++.. ...+...... -.....+++.++|.+++
T Consensus 199 --~~~~-----h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~-~~~v~~l~~spdg~~l~ 270 (753)
T 3jro_A 199 --TLEG-----HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKF-PDVLWRASWSLSGNVLA 270 (753)
T ss_dssp --EECC-----CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCC-SSCCCCEEECTTTCCEE
T ss_pred --eecC-----CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCC-CCceEEEEEcCCCCEEE
Confidence 1111 1223789999999 877777778888988888775211 1111111101 23467899999998776
Q ss_pred EecCCCeEEEEEcC
Q 039428 268 AGNPYPSARLVESS 281 (335)
Q Consensus 268 a~~~~~~~~v~~~~ 281 (335)
+....+.+++.+..
T Consensus 271 s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 271 LSGGDNKVTLWKEN 284 (753)
T ss_dssp EECSSSCEECCBCC
T ss_pred EEcCCCEEEEEecC
Confidence 65444667776654
No 258
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.11 E-value=0.0012 Score=58.33 Aligned_cols=205 Identities=6% Similarity=-0.009 Sum_probs=117.3
Q ss_pred ceeeeEEcCC--CCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCC-CeEEEEEecCCCCc
Q 039428 50 LCETAKWDDV--GRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPR-NRLLVAFTDVLGNK 126 (335)
Q Consensus 50 ~pegia~d~~--g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~-g~l~v~~~D~~~~~ 126 (335)
.-.+++|.++ |++++.+..+++|..||..+++. .....+.... .....++++|+. +.++++....
T Consensus 55 ~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~-----~~~~~~~~h~---~~v~~v~~~p~~~g~~l~s~s~d---- 122 (297)
T 2pm7_B 55 PVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRW-----SQIAVHAVHS---ASVNSVQWAPHEYGPMLLVASSD---- 122 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCB-----CCCEEECCCS---SCEEEEEECCGGGCSEEEEEETT----
T ss_pred CeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCce-----EEEEEeecCC---CceeEEEeCcCCCCcEEEEEECC----
Confidence 3468899753 77777778899999999654431 1001111111 246788998731 5554432221
Q ss_pred cceEEEEECCCCe-E-EEEeecCCCccCCCCCCceeECCC-------------CcEEEEeCCCCeEEEEccCC-c-EEEE
Q 039428 127 YSALAAYDLSTWK-R-LFLTQLSGKSEEKSTADDIAVDAE-------------GNAYVTDVVSSKIWKVGVEG-Q-LLSI 189 (335)
Q Consensus 127 ~~~v~~~d~~~~~-~-~~~~~~~~~~~~~~~p~~~~vd~~-------------G~lyV~d~~~~~I~~~d~~g-~-~~~~ 189 (335)
+.|..||.+++. . ...... . ....+.+++.|+ ++.+++.+..+.|..+|.+. + ....
T Consensus 123 -~~v~~wd~~~~~~~~~~~~~~----h-~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~ 196 (297)
T 2pm7_B 123 -GKVSVVEFKENGTTSPIIIDA----H-AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL 196 (297)
T ss_dssp -SEEEEEEBCSSSCBCCEEEEC----C-SSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEE
T ss_pred -CcEEEEEecCCCceeeeeeec----c-cCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEE
Confidence 358899987542 1 111111 1 233455667665 56788878888888887643 2 1110
Q ss_pred ecCCccccccccccccccCeEEEccCC---eEEEEECCCCEEEEEeCCCCcee--EEEEeccCCcCCCCCCeEEEcCCCc
Q 039428 190 IRSPLFTAKEWYKNVFGLNGIVYHPDG---FLIVIHMCSGNLFKIDIRKEEEE--VKLIELRGGSSLSLGDGLALLSPTK 264 (335)
Q Consensus 190 ~~~~~~~~~~~~~~~~~p~Gia~~~dg---~Lyvad~~~~~v~~~d~~~~~~~--~~~~~~~g~~~~~~pdGia~d~~g~ 264 (335)
. ..+.. .....+.++++|++ .++++-+.++.|...|.+..... ...+...+ . ......+++.++|+
T Consensus 197 ~--~~l~~-----H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~-~-~~~v~~~~~s~~g~ 267 (297)
T 2pm7_B 197 E--STLEG-----HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEK-F-PDVLWRASWSLSGN 267 (297)
T ss_dssp E--EEECC-----CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSC-C-SSCEEEEEECSSSC
T ss_pred E--EEecC-----CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeeccc-C-CCcEEEEEECCCCC
Confidence 0 01110 11236899999984 77777778888888887664211 12221111 1 12346789999998
Q ss_pred EEEEecCCCeEEEEEcC
Q 039428 265 LVVAGNPYPSARLVESS 281 (335)
Q Consensus 265 l~va~~~~~~~~v~~~~ 281 (335)
++++....+.+++.+..
T Consensus 268 ~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 268 VLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CEEEEETTSCEEEEEEC
T ss_pred EEEEEcCCCcEEEEEEC
Confidence 77775544667777654
No 259
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.11 E-value=0.00041 Score=62.17 Aligned_cols=206 Identities=12% Similarity=0.093 Sum_probs=120.1
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCC-CCeEEEE-EecCCCCcc
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRP-RNRLLVA-FTDVLGNKY 127 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~-~g~l~v~-~~D~~~~~~ 127 (335)
.-..++|+++|++++++..++.|..||..++.. .....+.... .....+++.+. +++++++ ..|
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~-----~~~~~l~gH~---~~V~~v~~~~~~~~~~l~s~s~D------ 80 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ-----ILIADLRGHE---GPVWQVAWAHPMYGNILASCSYD------ 80 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEE-----EEEEEEECCS---SCEEEEEECCGGGSSCEEEEETT------
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc-----EEEEEEcCCC---ccEEEEEeCCCCCCCEEEEEECC------
Confidence 356899999999888888899999998543320 0001111111 24678888642 3444443 223
Q ss_pred ceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCC--CcEEEEeCCCCeEEEEccCCc-EEEEecCCccccccccccc
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE--GNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAKEWYKNV 204 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~--G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~~~~~~~ 204 (335)
..|..||.++++......+.. . ....+.+++.|+ |.++++.+..+.|..++..+. ..... ..+.. ..
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~--h-~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~--~~~~~-----h~ 150 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHAG--H-DSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVK--KINNA-----HT 150 (316)
T ss_dssp SCEEEECCSSSCCCEEEEECC--C-SSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEEC--CBTTS-----SS
T ss_pred CEEEEEECCCCcceEEEEccC--C-CCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCccee--eeecc-----cc
Confidence 359999998764221112211 1 345788999987 778888888888888887643 11110 01110 11
Q ss_pred cccCeEEEccC-----------------CeEEEEECCCCEEEEEeCCCCceeEEEE-eccCCcCCCCCCeEEEcCCC---
Q 039428 205 FGLNGIVYHPD-----------------GFLIVIHMCSGNLFKIDIRKEEEEVKLI-ELRGGSSLSLGDGLALLSPT--- 263 (335)
Q Consensus 205 ~~p~Gia~~~d-----------------g~Lyvad~~~~~v~~~d~~~~~~~~~~~-~~~g~~~~~~pdGia~d~~g--- 263 (335)
...+.++++|+ +.++++-..++.|...|....+ ....+ .+.+ + -.....+++.+++
T Consensus 151 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~l~~-h-~~~V~~v~~sp~~~~~ 227 (316)
T 3bg1_A 151 IGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG-QWKEEQKLEA-H-SDWVRDVAWAPSIGLP 227 (316)
T ss_dssp SCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTS-CEEEEECCBC-C-SSCEEEEECCCCSSCS
T ss_pred CCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCC-ccceeeeccc-C-CCceEEEEecCCCCCC
Confidence 23566777776 3466666677777777775431 22222 2222 2 1235678888875
Q ss_pred -cEEEEecCCCeEEEEEcCC
Q 039428 264 -KLVVAGNPYPSARLVESSD 282 (335)
Q Consensus 264 -~l~va~~~~~~~~v~~~~~ 282 (335)
.++++....+.+++.+..+
T Consensus 228 ~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 228 TSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCEEEEEETTCEEEEEECSS
T ss_pred CceEEEEcCCCeEEEEEccC
Confidence 5666655457788877643
No 260
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.11 E-value=0.00094 Score=60.91 Aligned_cols=74 Identities=5% Similarity=-0.063 Sum_probs=54.3
Q ss_pred ccCeEEEccCCeEEEEECCCCE-EEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCC
Q 039428 206 GLNGIVYHPDGFLIVIHMCSGN-LFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSD 282 (335)
Q Consensus 206 ~p~Gia~~~dg~Lyvad~~~~~-v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~ 282 (335)
..+.++++|+|.++++-..++. |..+|...++ ....+.. +.. -.....+++.++|+++++....+.+++.+...
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~-~~~~~~~-g~h-~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV-LVREFRR-GLD-RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp CEEEEEECTTSSEEEEEETTCSEEEEEETTTCC-EEEEEEC-TTC-CSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred ceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc-EEEEEEc-CCC-CCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 3689999999988888888887 9999998764 5555542 101 13367899999998887765557788888654
No 261
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.10 E-value=0.00028 Score=65.78 Aligned_cols=210 Identities=15% Similarity=0.112 Sum_probs=125.0
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECC---CCCCCcceeeee-----EEeecCCc-CCCCcceEE--EeCCCCeEEEE
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVP---DEYSPGTVLEEV-----KLVKEDDV-VGNATMGIA--VDRPRNRLLVA 118 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~---~g~~~~~v~~~~-----~~~~~~~~-~~~~p~Gi~--~d~~~g~l~v~ 118 (335)
...+++|+++++.+++...++.|..||.. .++. .... .-+..... .......+. ..+ ++.++++
T Consensus 113 ~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 187 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESE----VKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVA 187 (437)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTE----EEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEE
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCce----eeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEE
Confidence 35789999999988888889999988752 2221 1100 00011100 111233343 334 4555554
Q ss_pred EecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCc-EEEEecCCcccc
Q 039428 119 FTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTA 197 (335)
Q Consensus 119 ~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~ 197 (335)
.... +.|..||.++++......... . ....+.++++++|+..++.+..+.|..+|.... ....+.. .
T Consensus 188 ~~~d-----~~i~iwd~~~~~~~~~~~~~~--h-~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~- 255 (437)
T 3gre_A 188 LTNL-----SRVIIFDIRTLERLQIIENSP--R-HGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF---G- 255 (437)
T ss_dssp EETT-----SEEEEEETTTCCEEEEEECCG--G-GCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC---T-
T ss_pred EeCC-----CeEEEEeCCCCeeeEEEccCC--C-CCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEec---C-
Confidence 2221 469999999887764433210 1 346788999999998888888899999998643 3332210 0
Q ss_pred ccccccccccCeEEEc----cCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCc----------------------CC
Q 039428 198 KEWYKNVFGLNGIVYH----PDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGS----------------------SL 251 (335)
Q Consensus 198 ~~~~~~~~~p~Gia~~----~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~----------------------~~ 251 (335)
.......++++ +++.++++-..++.|..+|...++ ....+...... ..
T Consensus 256 -----~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 329 (437)
T 3gre_A 256 -----DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH-CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSL 329 (437)
T ss_dssp -----TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE-EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSG
T ss_pred -----CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc-EEEEEEcCCCCCccceecccccccccceecccccC
Confidence 11235677555 457788888889999999998763 34444311100 00
Q ss_pred CCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 252 SLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 252 ~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
.....++++ ++.++++....+.+++.+...+
T Consensus 330 ~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 330 NALSTISVS-NDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp GGGCCEEEE-TTEEEEEEGGGTEEEEEETTCG
T ss_pred CceEEEEEC-CceEEEecCCCCeEEEEECCCc
Confidence 113457888 6676677554577888886544
No 262
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.09 E-value=0.0053 Score=55.11 Aligned_cols=204 Identities=12% Similarity=0.106 Sum_probs=116.9
Q ss_pred CCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCC
Q 039428 46 SPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGN 125 (335)
Q Consensus 46 ~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~ 125 (335)
+....-.+++++++ ++++...++.|..||...+.. .....+.... .......++++| ++.++++....
T Consensus 12 ~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~-----~~~~~~~~~~-h~~~v~~v~~sp-~~~~las~s~D--- 79 (330)
T 2hes_X 12 LYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF-----TLIDVLDETA-HKKAIRSVAWRP-HTSLLAAGSFD--- 79 (330)
T ss_dssp CCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC-----EEEEEECTTC-CCSCEEEEEECT-TSSEEEEEETT---
T ss_pred cCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe-----EEEEEEecCC-ccCCEEEEEECC-CCCEEEEEeCC---
Confidence 33334567888876 555557889999998643321 1101221111 113567899998 56555542211
Q ss_pred ccceEEEEECCCCe-----EEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccC-C-c---EEEEecCCcc
Q 039428 126 KYSALAAYDLSTWK-----RLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVE-G-Q---LLSIIRSPLF 195 (335)
Q Consensus 126 ~~~~v~~~d~~~~~-----~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~-g-~---~~~~~~~~~~ 195 (335)
..|..||.+... ......+.+ . ....+.++++|+|+.+++.+..+.|..+|.+ + . ....+..
T Consensus 80 --~~v~iw~~~~~~~~~~~~~~~~~~~~--h-~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~--- 151 (330)
T 2hes_X 80 --STVSIWAKEESADRTFEMDLLAIIEG--H-ENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQE--- 151 (330)
T ss_dssp --SCEEEEEC-------CCCEEEEEEC-------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECC---
T ss_pred --CcEEEEEcccCcCccccceeEEEEcC--C-CCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEecc---
Confidence 358889875321 011111211 1 3456789999999988888888999999873 2 1 1221211
Q ss_pred ccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCc-eeEEEEeccCCcCCCCCCeEEEcCC--CcEEEEecCC
Q 039428 196 TAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEE-EEVKLIELRGGSSLSLGDGLALLSP--TKLVVAGNPY 272 (335)
Q Consensus 196 ~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~-~~~~~~~~~g~~~~~~pdGia~d~~--g~l~va~~~~ 272 (335)
.....+.++++|++.++++-..++.|...+...+. .....+. + . -.....+++.++ +..+++....
T Consensus 152 -------h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~--~-h-~~~v~~~~~~~~~~~~~l~s~s~D 220 (330)
T 2hes_X 152 -------HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN--G-H-EGTVWSSDFDKTEGVFRLCSGSDD 220 (330)
T ss_dssp -------CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC--C-C-SSCEEEEEECCSSSSCEEEEEETT
T ss_pred -------CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc--C-C-CCcEEEEEecCCCCeeEEEEEeCC
Confidence 11237889999999877777788888877776541 0222232 2 2 123567888887 5555554434
Q ss_pred CeEEEEEc
Q 039428 273 PSARLVES 280 (335)
Q Consensus 273 ~~~~v~~~ 280 (335)
+.+++.+.
T Consensus 221 ~~v~iw~~ 228 (330)
T 2hes_X 221 STVRVWKY 228 (330)
T ss_dssp SCEEEEEE
T ss_pred CeEEEEEe
Confidence 66777654
No 263
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.08 E-value=0.0018 Score=63.13 Aligned_cols=191 Identities=13% Similarity=0.123 Sum_probs=121.5
Q ss_pred CcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCc--CCCCcceEEEeCCCCeEEEEEecCCCC
Q 039428 48 SFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDV--VGNATMGIAVDRPRNRLLVAFTDVLGN 125 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~--~~~~p~Gi~~d~~~g~l~v~~~D~~~~ 125 (335)
..+..+++|+|+|..+.+...++.|..||. ++. +. .+. +.. .....+.++++|++..|++++.|
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~-~~~-----l~---~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D---- 150 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKD-NKM-----LT---NLD-SKGNLSSRTYHCFEWNPIESSIVVGNED---- 150 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEET-TEE-----EE---ECC-CSSCSTTTCEEEEEECSSSSCEEEEETT----
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeC-Cce-----ee---ecc-CCCccccccEEEEEEcCCCCEEEEEcCC----
Confidence 345789999999999888888999999983 332 22 222 211 11246899999855556554332
Q ss_pred ccceEEEEECCCCeE-------EEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEE----EEecCCc
Q 039428 126 KYSALAAYDLSTWKR-------LFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLL----SIIRSPL 194 (335)
Q Consensus 126 ~~~~v~~~d~~~~~~-------~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~----~~~~~~~ 194 (335)
+.|..||.+++.+ .........+. ......+++.|+| +++.+..+.|+.++.+++.. ..+..
T Consensus 151 --GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh-~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~-- 223 (588)
T 2j04_A 151 --GELQFFSIRKNSENTPEFYFESSIRLSDAGS-KDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQN-- 223 (588)
T ss_dssp --SEEEEEECCCCTTTCCCCEEEEEEECSCTTC-CCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEEC--
T ss_pred --CEEEEEECCCCccccccceeeeeeecccccc-cccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecc--
Confidence 4699999988742 22222111111 3567789999999 56667788999999886542 11210
Q ss_pred cccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEE--cCCCcEEEEecCC
Q 039428 195 FTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLAL--LSPTKLVVAGNPY 272 (335)
Q Consensus 195 ~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~--d~~g~l~va~~~~ 272 (335)
. .......++|+ ++.|..+ . .++|..+|..++ ....+.. | . .....+|++ .+++..+++...+
T Consensus 224 ~-------h~~~V~svaFs-g~~LASa-~-~~tIkLWd~~~~--~~~~~~~-g-h-~~~V~~va~~~s~d~~~La~a~ed 288 (588)
T 2j04_A 224 A-------SRRKITDLKIV-DYKVVLT-C-PGYVHKIDLKNY--SISSLKT-G-S-LENFHIIPLNHEKESTILLMSNKT 288 (588)
T ss_dssp C-------CSSCCCCEEEE-TTEEEEE-C-SSEEEEEETTTT--EEEEEEC-S-C-CSCCCEEEETTCSSCEEEEECSSC
T ss_pred c-------ccCcEEEEEEE-CCEEEEE-e-CCeEEEEECCCC--eEEEEEc-C-C-CceEEEEEeeeCCCCCEEEEEcCC
Confidence 0 11347899999 4455544 3 589999999987 4434443 3 2 244678999 8888665554433
Q ss_pred Ce
Q 039428 273 PS 274 (335)
Q Consensus 273 ~~ 274 (335)
+.
T Consensus 289 G~ 290 (588)
T 2j04_A 289 SY 290 (588)
T ss_dssp EE
T ss_pred CC
Confidence 44
No 264
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.05 E-value=0.00014 Score=68.24 Aligned_cols=159 Identities=8% Similarity=0.068 Sum_probs=104.3
Q ss_pred CcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC-CCcEEEEeCCCCeEEEE
Q 039428 102 ATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDVVSSKIWKV 180 (335)
Q Consensus 102 ~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~~~~~I~~~ 180 (335)
....|+++|.++++.++.. .. +.|..||.++++......+.+. ....+.+++.| +++++++.+..+.|..+
T Consensus 121 ~V~~l~~~P~~~~~lasGs-~d----g~i~lWd~~~~~~~~~~~~~gH---~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGS-KG----GDIMLWNFGIKDKPTFIKGIGA---GGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp CEEEEEECSSCTTCEEEEE-TT----SCEEEECSSCCSCCEEECCCSS---SCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred CEEEEEEeCCCCCEEEEEe-CC----CEEEEEECCCCCceeEEEccCC---CCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 4678999986666665422 21 3599999987654333333221 34578899997 68888888889999999
Q ss_pred ccCCcEEEEecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEc
Q 039428 181 GVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALL 260 (335)
Q Consensus 181 d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d 260 (335)
|.+++....+..... .......+++++++.++++-..++.|..+|+++. ....+. + . -.....+++.
T Consensus 193 d~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~--~~~~~~--~-h-~~~v~~v~~~ 259 (435)
T 4e54_B 193 DFKGNILRVFASSDT-------INIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK--ELWNLR--M-H-KKKVTHVALN 259 (435)
T ss_dssp ETTSCEEEEEECCSS-------CSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC--BCCCSB--C-C-SSCEEEEEEC
T ss_pred eccCCceeEEeccCC-------CCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc--eeEEEe--c-c-cceEEeeeec
Confidence 998776554322110 1123568999999988888888999999999875 332222 2 1 1235678888
Q ss_pred CCCc-EEEEecCCCeEEEEEcC
Q 039428 261 SPTK-LVVAGNPYPSARLVESS 281 (335)
Q Consensus 261 ~~g~-l~va~~~~~~~~v~~~~ 281 (335)
+++. ++++....+.+++.+..
T Consensus 260 p~~~~~~~s~s~d~~v~iwd~~ 281 (435)
T 4e54_B 260 PCCDWFLATASVDQTVKIWDLR 281 (435)
T ss_dssp TTCSSEEEEEETTSBCCEEETT
T ss_pred CCCceEEEEecCcceeeEEecc
Confidence 8874 55554434667776654
No 265
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.04 E-value=0.0021 Score=64.33 Aligned_cols=204 Identities=13% Similarity=0.115 Sum_probs=113.0
Q ss_pred eeeeEEcCCCCEEEEE-ecCC----eEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCC-
Q 039428 51 CETAKWDDVGRRFLVS-FLDG----GVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLG- 124 (335)
Q Consensus 51 pegia~d~~g~~~~~~-~~~~----~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~- 124 (335)
-.+++|+|+|+.+... ...| .|+++|..+++ .... .+ .. ....++++++++..|+.+..+...
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~----~~~~--~~--~~---~~~~~~~wspDg~~l~~~~~~~~~~ 195 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK----ELPD--VL--ER---VKFSCMAWTHDGKGMFYNAYPQQDG 195 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE----EEEE--EE--EE---ECSCCEEECTTSSEEEEEECCCCSS
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC----CCcc--cc--cC---cccceEEEEeCCCEEEEEEECCccc
Confidence 3578999999977666 3333 89999975554 1110 11 11 123578999866667776444320
Q ss_pred ---------CccceEEEEECCCCeE--EEEeecCCCccCCCCCCceeECCCCc-EEEEeC-C---CCeEEEEccCC----
Q 039428 125 ---------NKYSALAAYDLSTWKR--LFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDV-V---SSKIWKVGVEG---- 184 (335)
Q Consensus 125 ---------~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~-~---~~~I~~~d~~g---- 184 (335)
.....|++++..+++. ...... +.. .....++.+++||+ ++++.. . ...|+.+|.++
T Consensus 196 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~--~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 272 (710)
T 2xdw_A 196 KSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF--PDE-PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNG 272 (710)
T ss_dssp CCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC--TTC-TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSS
T ss_pred cccccccccCCCCEEEEEECCCCcccceEEecc--CCC-CeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccc
Confidence 1124699999987652 111121 111 23345789999996 444322 2 57899999764
Q ss_pred --c---EEEEecCCccccccccccccccCeEEEccCC-eEEEEECC---CCEEEEEeCCCCce-e-EEEEeccCCcCCCC
Q 039428 185 --Q---LLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMC---SGNLFKIDIRKEEE-E-VKLIELRGGSSLSL 253 (335)
Q Consensus 185 --~---~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~---~~~v~~~d~~~~~~-~-~~~~~~~g~~~~~~ 253 (335)
. ...+... .....-.++++| .||+.... +.+|+++|+++++. . ..++.-.. ...
T Consensus 273 ~~~~~~~~~l~~~------------~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~---~~~ 337 (710)
T 2xdw_A 273 ITGILKWVKLIDN------------FEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE---KDV 337 (710)
T ss_dssp SCSSCCCEEEECS------------SSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS---SCE
T ss_pred cCCccceEEeeCC------------CCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC---CCe
Confidence 2 2222110 012223578888 77766543 45899999987520 1 23332111 112
Q ss_pred CCeEEEcCCCcEEEEec--CCCeEEEEEcCCC
Q 039428 254 GDGLALLSPTKLVVAGN--PYPSARLVESSDG 283 (335)
Q Consensus 254 pdGia~d~~g~l~va~~--~~~~~~v~~~~~~ 283 (335)
..++++.+++.++++.. +...+++++..++
T Consensus 338 ~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g 369 (710)
T 2xdw_A 338 LEWVACVRSNFLVLCYLHDVKNTLQLHDLATG 369 (710)
T ss_dssp EEEEEEETTTEEEEEEEETTEEEEEEEETTTC
T ss_pred EEEEEEEcCCEEEEEEEECCEEEEEEEECCCC
Confidence 45677776677777733 2234666665344
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.04 E-value=0.011 Score=58.00 Aligned_cols=207 Identities=17% Similarity=0.137 Sum_probs=110.8
Q ss_pred ceEEEeCCCCeEEEEEecC----------CC------C-c-cceEEEEECCCCeEEEEeecCCCcc-CCCCCC-ceeEC-
Q 039428 104 MGIAVDRPRNRLLVAFTDV----------LG------N-K-YSALAAYDLSTWKRLFLTQLSGKSE-EKSTAD-DIAVD- 162 (335)
Q Consensus 104 ~Gi~~d~~~g~l~v~~~D~----------~~------~-~-~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~p~-~~~vd- 162 (335)
..+++|++.+.+|+...+. .+ + . ...|+.+|+++|++++..+...... ....++ .+.++
T Consensus 249 ~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~ 328 (582)
T 1flg_A 249 QSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDY 328 (582)
T ss_dssp SCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEE
T ss_pred CCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEee
Confidence 3578898889999976421 11 0 0 1469999999999998765532100 011111 13333
Q ss_pred --CCCc---EEEEeCCCCeEEEEccC-CcEEEEecCC--------------------ccccc-------cc-----cc--
Q 039428 163 --AEGN---AYVTDVVSSKIWKVGVE-GQLLSIIRSP--------------------LFTAK-------EW-----YK-- 202 (335)
Q Consensus 163 --~~G~---lyV~d~~~~~I~~~d~~-g~~~~~~~~~--------------------~~~~~-------~~-----~~-- 202 (335)
.+|+ +++..+.++.++.+|++ |+.+...... .+..+ .. .+
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~ 408 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPF 408 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCT
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCC
Confidence 3563 45555667888888865 4443322110 00000 00 00
Q ss_pred -cccccCeEEEccCC-eEEEEEC--------------------------------CCCEEEEEeCCCCceeEEEEeccCC
Q 039428 203 -NVFGLNGIVYHPDG-FLIVIHM--------------------------------CSGNLFKIDIRKEEEEVKLIELRGG 248 (335)
Q Consensus 203 -~~~~p~Gia~~~dg-~Lyvad~--------------------------------~~~~v~~~d~~~~~~~~~~~~~~g~ 248 (335)
....-.++++||+. .+|+... ..+.|+.+|+.+++ .+-.++...
T Consensus 409 ~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~-~~W~~~~~~- 486 (582)
T 1flg_A 409 LGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGK-VVWEHKEHL- 486 (582)
T ss_dssp TCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCC-EEEEEEESS-
T ss_pred ccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCC-EEEEecCCC-
Confidence 01112478999875 7777542 24789999998874 333343321
Q ss_pred cCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEE-eCCeEEEEeccCCC
Q 039428 249 SSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATV-KDGRVYLSHLLGLG 320 (335)
Q Consensus 249 ~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~-~~g~lyV~~~~~~~ 320 (335)
..-.|......|.+|+... .+.++.++...| +.+-++..+.....+-+++ .+|++||+...|.|
T Consensus 487 ---~~~~g~~~tagglvf~g~~-dg~l~A~D~~tG----~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G~g 551 (582)
T 1flg_A 487 ---PLWAGVLATAGNLVFTGTG-DGYFKAFDAKSG----KELWKFQTGSGIVSPPITWEQDGEQYLGVTVGYG 551 (582)
T ss_dssp ---CCCSCCEEETTTEEEEECT-TSEEEEEETTTC----CEEEEEECSSCCCSCCEEEEETTEEEEEEEECCC
T ss_pred ---CCcccceEeCCCEEEEECC-CCcEEEEECCCC----CEEEEecCCCCcccCceEEEECCEEEEEEEccCC
Confidence 1112333345677888644 467888887665 2233333232222222555 59999996666543
No 267
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.00 E-value=0.0001 Score=71.92 Aligned_cols=182 Identities=15% Similarity=0.075 Sum_probs=102.6
Q ss_pred eeeEEcCCCC-EEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEE-EEecCCCCccce
Q 039428 52 ETAKWDDVGR-RFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLV-AFTDVLGNKYSA 129 (335)
Q Consensus 52 egia~d~~g~-~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v-~~~D~~~~~~~~ 129 (335)
...+|+++|+ +++++...+.+..+|..+++ .. ++...+. ..++++| +|+.++ +..|..+. ..
T Consensus 113 ~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~-----~~--~l~~~~~------~~~~~sp-DG~~la~~~~~~~~~--~~ 176 (582)
T 3o4h_A 113 RILSGVDTGEAVVFTGATEDRVALYALDGGG-----LR--ELARLPG------FGFVSDI-RGDLIAGLGFFGGGR--VS 176 (582)
T ss_dssp EEEEEEECSSCEEEEEECSSCEEEEEEETTE-----EE--EEEEESS------CEEEEEE-ETTEEEEEEEEETTE--EE
T ss_pred eeeeeCCCCCeEEEEecCCCCceEEEccCCc-----EE--EeecCCC------ceEEECC-CCCEEEEEEEcCCCC--eE
Confidence 3557888875 45565444555567754343 12 1322221 5788998 555544 33332221 35
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCC--eEEEEccCCcEEEEecCCcccccccccccccc
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSS--KIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGL 207 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~--~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p 207 (335)
|+++|+++++....... ....+.++++|||+.+++....+ .|+++|.+++..+.+... ...........+
T Consensus 177 i~~~d~~~g~~~~l~~~------~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~ 248 (582)
T 3o4h_A 177 LFTSNLSSGGLRVFDSG------EGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELP--SKDFSSYRPTAI 248 (582)
T ss_dssp EEEEETTTCCCEEECCS------SCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCS--CSHHHHHCCSEE
T ss_pred EEEEcCCCCCceEeecC------CCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCC--CcChhhhhhccc
Confidence 99999988876532211 23447899999997444444445 899999987654433211 100000000112
Q ss_pred CeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEE
Q 039428 208 NGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVA 268 (335)
Q Consensus 208 ~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va 268 (335)
...+++|||.+|++...++++..++. +. ... ... .....+++. +|+++++
T Consensus 249 ~~~~~spdg~~~~~~~~~g~~~l~~~-g~--~~~---~~~----~~v~~~~~s-dg~~l~~ 298 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARREGRSAVFID-GE--RVE---APQ----GNHGRVVLW-RGKLVTS 298 (582)
T ss_dssp EEEEECTTSCEEEEEEETTEEEEEET-TE--EEC---CCS----SEEEEEEEE-TTEEEEE
T ss_pred cceeEcCCCcEEEEEEcCCcEEEEEE-CC--eec---cCC----CceEEEEec-CCEEEEE
Confidence 33449999988888777888777777 32 221 111 124578888 8876665
No 268
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.97 E-value=0.011 Score=58.28 Aligned_cols=202 Identities=14% Similarity=0.107 Sum_probs=108.5
Q ss_pred eEEEeCCCCeEEEEEecCC--------CCc--cceEEEEECCCCeEEEEeecCCCcc-CCCCCCc-eeEC---CCC---c
Q 039428 105 GIAVDRPRNRLLVAFTDVL--------GNK--YSALAAYDLSTWKRLFLTQLSGKSE-EKSTADD-IAVD---AEG---N 166 (335)
Q Consensus 105 Gi~~d~~~g~l~v~~~D~~--------~~~--~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~p~~-~~vd---~~G---~ 166 (335)
.+++|++.+.+|+...+.. ++. .+.|+.+|+++|++++..+...... ....++. +.+| .+| .
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~ 324 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARK 324 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEE
Confidence 5688888899999654320 000 1469999999999997766532100 0011111 2333 456 4
Q ss_pred EEEEeCCCCeEEEEccC-CcEEEEecCC----cc----------------c----------cccccccccccCeEEEccC
Q 039428 167 AYVTDVVSSKIWKVGVE-GQLLSIIRSP----LF----------------T----------AKEWYKNVFGLNGIVYHPD 215 (335)
Q Consensus 167 lyV~d~~~~~I~~~d~~-g~~~~~~~~~----~~----------------~----------~~~~~~~~~~p~Gia~~~d 215 (335)
+++.-..++.++.+|.+ |+.+...... +. . .|+ ......-.++++||+
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~-~~Gg~~w~~~a~dp~ 403 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPS-AMGYHNQGHDSYDPK 403 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSC-TTCSSCSCBCEEETT
T ss_pred EEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccC-cccccCCCCccCCCC
Confidence 56655667888888875 5443322100 00 0 000 001123468899997
Q ss_pred C-eEEEEEC--------------------------------------CCCEEEEEeCCCCceeEEEEeccCCcCCCCCCe
Q 039428 216 G-FLIVIHM--------------------------------------CSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDG 256 (335)
Q Consensus 216 g-~Lyvad~--------------------------------------~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdG 256 (335)
. .+|+... ..+.|+.+|+.+++ .+-..+... ..--|
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~-~~W~~~~~~----~~~~g 478 (599)
T 1w6s_A 404 RELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGD-YKWEKMERF----AVWGG 478 (599)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCC-EEEEEEESS----CCCSB
T ss_pred CCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCC-EEeEecCCC----CccCc
Confidence 6 5665421 23688889988774 333333221 11234
Q ss_pred EEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCC--CCCcceEEEE-eCCeEEEEeccCC
Q 039428 257 LALLSPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGP--THRVATAATV-KDGRVYLSHLLGL 319 (335)
Q Consensus 257 ia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p--~~~~Pt~va~-~~g~lyV~~~~~~ 319 (335)
......|.+|++.. .+.++.++...| +.+-++..+ ....| +++ .+|++||....|.
T Consensus 479 ~~~tagg~vf~gt~-dg~l~A~D~~tG----~~lW~~~l~~g~~~~P--~~y~~~G~qyv~~~~G~ 537 (599)
T 1w6s_A 479 TMATAGDLVFYGTL-DGYLKARDSDTG----DLLWKFKIPSGAIGYP--MTYTHKGTQYVAIYYGV 537 (599)
T ss_dssp CEEETTTEEEEECT-TSEEEEEETTTC----CEEEEEECSSCCCSCC--EEEEETTEEEEEEEECC
T ss_pred ceEecCCEEEEECC-CCeEEEEECCCC----CEEEEeeCCCCcEecc--EEEEeCCEEEEEEEccC
Confidence 33345678888644 367888887766 222222222 22223 444 5999999655554
No 269
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.97 E-value=0.0007 Score=60.74 Aligned_cols=201 Identities=10% Similarity=0.072 Sum_probs=106.7
Q ss_pred CcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEE--eCCCCeEEEEEecCCCC
Q 039428 48 SFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAV--DRPRNRLLVAFTDVLGN 125 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~--d~~~g~l~v~~~D~~~~ 125 (335)
.....+++|+++++.+++...++.|..||..++. .. ...... .....+++ ++ +++++++....
T Consensus 86 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----~~--~~~~~~----~~v~~~~~~~~~-~~~~l~~~~~d--- 150 (368)
T 3mmy_A 86 TGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQ-----AI--QIAQHD----APVKTIHWIKAP-NYSCVMTGSWD--- 150 (368)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-----EE--EEEECS----SCEEEEEEEECS-SCEEEEEEETT---
T ss_pred cCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCC-----ce--eecccc----CceEEEEEEeCC-CCCEEEEccCC---
Confidence 3346789999999988888889999999965443 11 122211 25678888 65 56555542221
Q ss_pred ccceEEEEECCCCeEEEEeecCCCc------------------------------------cCCCCCCceeECCCC----
Q 039428 126 KYSALAAYDLSTWKRLFLTQLSGKS------------------------------------EEKSTADDIAVDAEG---- 165 (335)
Q Consensus 126 ~~~~v~~~d~~~~~~~~~~~~~~~~------------------------------------~~~~~p~~~~vd~~G---- 165 (335)
+.|..||.++++........... ........+++.+++
T Consensus 151 --g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (368)
T 3mmy_A 151 --KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKP 228 (368)
T ss_dssp --SEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCE
T ss_pred --CcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCC
Confidence 35888888766533222111000 000011111221111
Q ss_pred cEEEEeCCCCeEEEEccCCcE----EEEecCCccc-cc-cccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCcee
Q 039428 166 NAYVTDVVSSKIWKVGVEGQL----LSIIRSPLFT-AK-EWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEE 239 (335)
Q Consensus 166 ~lyV~d~~~~~I~~~d~~g~~----~~~~~~~~~~-~~-~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~ 239 (335)
..+++.+..+.|..++.+... ...+....-. .. .........+.++++|++.++++-..++.|..+|....+ .
T Consensus 229 ~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~-~ 307 (368)
T 3mmy_A 229 TGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART-K 307 (368)
T ss_dssp EEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE-E
T ss_pred CeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc-E
Confidence 124444555666666654321 1111000000 00 000001137899999999666666678899999998763 3
Q ss_pred EEEEeccCCcCCCCCCeEEEcCCCcEEEEec
Q 039428 240 VKLIELRGGSSLSLGDGLALLSPTKLVVAGN 270 (335)
Q Consensus 240 ~~~~~~~g~~~~~~pdGia~d~~g~l~va~~ 270 (335)
...+. + . ......+++.++|.++++..
T Consensus 308 ~~~~~--~-~-~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 308 LKTSE--Q-L-DQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp EEECC--C-C-SSCEEEEEECTTSSCEEEEE
T ss_pred EEEec--C-C-CCCceEEEECCCCCeEEEEe
Confidence 33333 2 1 13367899999997666643
No 270
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.95 E-value=0.0098 Score=55.18 Aligned_cols=198 Identities=13% Similarity=0.131 Sum_probs=119.6
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
+|..-++|+++ +++.++. +++|+.||..+++ +.. .+...+. ......|++++ +|+++++.... .
T Consensus 106 ~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~----~~~---~~~~~~~-~~~V~sv~fsp-dg~~lasgs~D-----g 169 (420)
T 4gga_A 106 YYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGD----ILQ---LLQMEQP-GEYISSVAWIK-EGNYLAVGTSS-----A 169 (420)
T ss_dssp TTCBCEEECTT-SEEEEEE-TTEEEEEETTTCC----EEE---EEECCST-TCCEEEEEECT-TSSEEEEEETT-----S
T ss_pred ccceeEEECCC-CEEEEEe-CCEEEEEECCCCC----EEE---EEEecCC-CCcEEEEEECC-CCCEEEEEECC-----C
Confidence 45677899875 5666654 8899999976665 122 3322221 13568999998 55555432211 3
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCc--EEEEecCCccccccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ--LLSIIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~--~~~~~~~~~~~~~~~~~~~~~ 206 (335)
.|..||.++++....... . .... .++..++++.++.+..+.+..++.... ....+.. ....
T Consensus 170 ~v~iWd~~~~~~~~~~~~--h---~~~v--~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~----------h~~~ 232 (420)
T 4gga_A 170 EVQLWDVQQQKRLRNMTS--H---SARV--GSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSG----------HSQE 232 (420)
T ss_dssp CEEEEETTTTEEEEEECC--C---SSCE--EEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEEC----------CSSC
T ss_pred eEEEEEcCCCcEEEEEeC--C---CCce--EEEeeCCCEEEEEeCCCceeEeeecccceeeEEecc----------cccc
Confidence 599999999887644322 1 1222 344456778888888889988886542 2221211 1123
Q ss_pred cCeEEEccCCeEEEEECCCCEEEEEeCCCCce---eEEEEeccCCcCCCCCCeEEEcCCC-cEEEEe--cCCCeEEEEEc
Q 039428 207 LNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEE---EVKLIELRGGSSLSLGDGLALLSPT-KLVVAG--NPYPSARLVES 280 (335)
Q Consensus 207 p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~---~~~~~~~~g~~~~~~pdGia~d~~g-~l~va~--~~~~~~~v~~~ 280 (335)
..++.++++|..+++-..++.+..++...++. ...... . . ......+++.+.+ .++++. ...+.+++.+.
T Consensus 233 ~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~--~-~-~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~ 308 (420)
T 4gga_A 233 VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFT--Q-H-QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 308 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEEC--C-C-SSCEEEEEECTTCTTEEEEEECTTTCEEEEEET
T ss_pred eeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeec--c-c-CCceeeeeeCCCcccEEEEEeecCCCEEEEEeC
Confidence 67899999997777777888898888876521 111221 1 1 1224567777765 455442 23356777777
Q ss_pred CCC
Q 039428 281 SDG 283 (335)
Q Consensus 281 ~~~ 283 (335)
..+
T Consensus 309 ~t~ 311 (420)
T 4gga_A 309 CSG 311 (420)
T ss_dssp TTT
T ss_pred Ccc
Confidence 655
No 271
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.94 E-value=0.00028 Score=74.07 Aligned_cols=180 Identities=15% Similarity=0.044 Sum_probs=110.1
Q ss_pred ceeeeEEc-CCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 50 LCETAKWD-DVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 50 ~pegia~d-~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
...+++|+ |+|+.+++.. .+.|+.++..++. .. .+ ....+.....++++ ++..|+.+ .+. .
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~-----~~---~~--~~~~~~~~~~~~~s-dg~~l~~~-s~~-----~ 358 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY-----VL---KV--PEPLRIRYVRRGGD-TKVAFIHG-TRE-----G 358 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB-----EE---EC--SCCSCEEEEEECSS-SEEEEEEE-ETT-----E
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc-----eE---Ec--cCCCcceEEeeeEc-CCCeEEEE-ECC-----C
Confidence 36789999 9998666554 7899999854333 11 11 11111134566666 44455553 331 4
Q ss_pred eEE-EEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEE-EecCCccccccccccccc
Q 039428 129 ALA-AYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLS-IIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 129 ~v~-~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~-~~~~~~~~~~~~~~~~~~ 206 (335)
.++ .+|.++++... +.. . ...+..++++|||+..++....+.|+.+|.+++... ++.. ....
T Consensus 359 ~l~~~~d~~~~~~~~---l~~--~-~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~----------~~~~ 422 (1045)
T 1k32_A 359 DFLGIYDYRTGKAEK---FEE--N-LGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS----------REAM 422 (1045)
T ss_dssp EEEEEEETTTCCEEE---CCC--C-CCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC----------SSSC
T ss_pred ceEEEEECCCCCceE---ecC--C-ccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccC----------CCCC
Confidence 698 99998876542 211 1 345678999999985555566789999998754433 2211 0112
Q ss_pred cCeEEEccCC-eEEEEECC---------CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-EEEEe
Q 039428 207 LNGIVYHPDG-FLIVIHMC---------SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK-LVVAG 269 (335)
Q Consensus 207 p~Gia~~~dg-~Lyvad~~---------~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~-l~va~ 269 (335)
...++++||| +|.++... .+.|+.+|++++ ....+. + . ......+++.++|+ ||++.
T Consensus 423 v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g--~~~~l~--~-~-~~~~~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 423 ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR--KIFAAT--T-E-NSHDYAPAFDADSKNLYYLS 490 (1045)
T ss_dssp CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT--EEEECS--C-S-SSBEEEEEECTTSCEEEEEE
T ss_pred ccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC--cEEEee--C-C-CcccCCceEcCCCCEEEEEe
Confidence 5789999999 56555432 258999999886 433332 2 1 12345688999986 55553
No 272
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.93 E-value=5.9e-05 Score=73.03 Aligned_cols=113 Identities=14% Similarity=0.130 Sum_probs=75.5
Q ss_pred CCCCCceeECC-CCcEEEEeCC---------------------CCeEEEEccCCc------E--EEE-e-cCCcccc---
Q 039428 153 KSTADDIAVDA-EGNAYVTDVV---------------------SSKIWKVGVEGQ------L--LSI-I-RSPLFTA--- 197 (335)
Q Consensus 153 ~~~p~~~~vd~-~G~lyV~d~~---------------------~~~I~~~d~~g~------~--~~~-~-~~~~~~~--- 197 (335)
+.+|.+++++| +|.+|++-+. .|.|+++..++. + ..+ + +++.-..
T Consensus 383 mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~ 462 (592)
T 4a9v_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred ccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccc
Confidence 68899999998 5899998543 278999986532 1 111 1 1111000
Q ss_pred -c-----cccccccccCeEEEccCCeEEE-EECC-----------CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEE
Q 039428 198 -K-----EWYKNVFGLNGIVYHPDGFLIV-IHMC-----------SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLAL 259 (335)
Q Consensus 198 -~-----~~~~~~~~p~Gia~~~dg~Lyv-ad~~-----------~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~ 259 (335)
. .....+.+||+|+++++|.||+ +|.. ++.|+++++..+ .+..+.... . ...|.|+++
T Consensus 463 ~~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tG--el~~fl~~P-~-~aEpnGiaf 538 (592)
T 4a9v_A 463 KGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG--EIRRFMVGP-I-GCEVTGISF 538 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTC--CEEEEEECC-T-TCEEEEEEE
T ss_pred ccCccCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCC--eEEEEEeCC-C-CccccCCEE
Confidence 0 0112467899999999999999 7753 458999999776 455553211 1 245899999
Q ss_pred cCCC-cEEEEe
Q 039428 260 LSPT-KLVVAG 269 (335)
Q Consensus 260 d~~g-~l~va~ 269 (335)
.+|+ .|||+-
T Consensus 539 SPD~ktLfV~v 549 (592)
T 4a9v_A 539 SPDQKTLFVGI 549 (592)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 9998 588883
No 273
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.93 E-value=0.01 Score=59.35 Aligned_cols=168 Identities=13% Similarity=0.030 Sum_probs=94.6
Q ss_pred CCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcC---------CCCcceEEEeCCCCeEEEEEecCCCCccceE
Q 039428 60 GRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVV---------GNATMGIAVDRPRNRLLVAFTDVLGNKYSAL 130 (335)
Q Consensus 60 g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~---------~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v 130 (335)
++.+|+...++.|+.+|..+|+ ++ |-...... .....+++++ +++||+...| ..|
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~----~~----W~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~v~v~~~d------g~l 140 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGN----RI----WTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAWD------GRL 140 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTE----EE----EEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECTT------SEE
T ss_pred CCEEEEECCCCeEEEEECCCCc----EE----EEEcCCCCccccccccccCCCCCceEE--CCEEEEEcCC------CEE
Confidence 3455666557899999976665 11 32222110 0123467776 6899995333 359
Q ss_pred EEEECCCCeEEEEeecC-CCccCCCCCCceeECCCCcEEEEeCC-----CCeEEEEccC-CcEEEEecCCccc--cc---
Q 039428 131 AAYDLSTWKRLFLTQLS-GKSEEKSTADDIAVDAEGNAYVTDVV-----SSKIWKVGVE-GQLLSIIRSPLFT--AK--- 198 (335)
Q Consensus 131 ~~~d~~~~~~~~~~~~~-~~~~~~~~p~~~~vd~~G~lyV~d~~-----~~~I~~~d~~-g~~~~~~~~~~~~--~~--- 198 (335)
+.+|.++|++++..... .............++ +|.+||.... .+.|+.+|.. |+.+..+....-. .+
T Consensus 141 ~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~ 219 (677)
T 1kb0_A 141 IALDAATGKEVWHQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFED 219 (677)
T ss_dssp EEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSS
T ss_pred EEEECCCCCEEeeecCCcCcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccc
Confidence 99999999998776653 111101111122232 5789997653 5899999975 6665433211000 00
Q ss_pred --------ccc---------ccccccCeEEEccCC-eEEEEECCC------------------CEEEEEeCCCCceeEEE
Q 039428 199 --------EWY---------KNVFGLNGIVYHPDG-FLIVIHMCS------------------GNLFKIDIRKEEEEVKL 242 (335)
Q Consensus 199 --------~~~---------~~~~~p~Gia~~~dg-~Lyvad~~~------------------~~v~~~d~~~~~~~~~~ 242 (335)
.+. .....-..+++|+++ .||+..... +.|+.+|+++++ .+..
T Consensus 220 ~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~-~~W~ 298 (677)
T 1kb0_A 220 ESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGK-YKWH 298 (677)
T ss_dssp HHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCC-EEEE
T ss_pred cccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCC-EEEE
Confidence 000 000112468999976 788765432 369999999874 4444
Q ss_pred Eec
Q 039428 243 IEL 245 (335)
Q Consensus 243 ~~~ 245 (335)
+..
T Consensus 299 ~~~ 301 (677)
T 1kb0_A 299 YQE 301 (677)
T ss_dssp EES
T ss_pred Eec
Confidence 443
No 274
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.89 E-value=0.0052 Score=61.35 Aligned_cols=200 Identities=15% Similarity=0.192 Sum_probs=101.9
Q ss_pred eEEEeCCCCeEEEEEecCC-----------CCc--cceEEEEECCCCeEEEEeecCCCcc-CC--CCC---CceeECCCC
Q 039428 105 GIAVDRPRNRLLVAFTDVL-----------GNK--YSALAAYDLSTWKRLFLTQLSGKSE-EK--STA---DDIAVDAEG 165 (335)
Q Consensus 105 Gi~~d~~~g~l~v~~~D~~-----------~~~--~~~v~~~d~~~~~~~~~~~~~~~~~-~~--~~p---~~~~vd~~G 165 (335)
.+++|++.+.+|+...+.. ++. ...|+.+|+++|++++......... .. ..| .++.+ +|
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~--~G 311 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI--DG 311 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE--TT
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEecc--CC
Confidence 4789987899999643321 000 1259999999999997766531100 00 011 12223 33
Q ss_pred c---EEEEeCCCCeEEEEccC-CcEEEEecCC---c------------------cc------cccccccccccCeEEEcc
Q 039428 166 N---AYVTDVVSSKIWKVGVE-GQLLSIIRSP---L------------------FT------AKEWYKNVFGLNGIVYHP 214 (335)
Q Consensus 166 ~---lyV~d~~~~~I~~~d~~-g~~~~~~~~~---~------------------~~------~~~~~~~~~~p~Gia~~~ 214 (335)
+ +++....++.++.+|.+ |+.+....-. | +. .|. ......-.+++++|
T Consensus 312 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~-~~G~~~w~~~a~dp 390 (668)
T 1kv9_A 312 KPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPS-PFGAHNWHSMSFNP 390 (668)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSC-TTCSSCSSCCEEET
T ss_pred cEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCC-CccccCCCcceECC
Confidence 2 33333456667777654 4433111000 0 00 000 00112235689999
Q ss_pred CC-eEEEEEC-----------------------------------CCCEEEEEeCCCCceeEEEEeccCCcCCCCCCe-E
Q 039428 215 DG-FLIVIHM-----------------------------------CSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDG-L 257 (335)
Q Consensus 215 dg-~Lyvad~-----------------------------------~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdG-i 257 (335)
+. .+|+... ..+.|+.+|+.+++ .+..+.... . ..+ .
T Consensus 391 ~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~-~~W~~~~~~----~-~~~~~ 464 (668)
T 1kv9_A 391 GTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQK-AAWKVPYPT----H-WNGGT 464 (668)
T ss_dssp TTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTE-EEEEEEESS----S-CCCCE
T ss_pred CCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCc-EEEEccCCC----C-CcCce
Confidence 76 7777321 12789999998874 333333321 1 233 3
Q ss_pred EEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEE-eCCeEEEEeccC
Q 039428 258 ALLSPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAATV-KDGRVYLSHLLG 318 (335)
Q Consensus 258 a~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~-~~g~lyV~~~~~ 318 (335)
.....|.+|+... .+.+++++...+ +.+.++..+.....+-+++ .+|++||+...|
T Consensus 465 ~~t~gg~vf~g~~-dg~l~a~d~~tG----~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~G 521 (668)
T 1kv9_A 465 LSTAGNLVFQGTA-AGQMHAYSADKG----EALWQFEAQSGIVAAPMTFELAGRQYVAIMAG 521 (668)
T ss_dssp EEETTTEEEEECT-TSEEEEEETTTC----CEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred eEeCCCEEEEECC-cccchhhhhhcC----hhheEecCCCCcccCceEEEECCEEEEEEEec
Confidence 3344567777743 467888887665 2333332222111122444 589999855554
No 275
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.88 E-value=0.00027 Score=64.54 Aligned_cols=182 Identities=12% Similarity=0.070 Sum_probs=98.5
Q ss_pred eeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcce--E----------------EEeCCCCe
Q 039428 53 TAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMG--I----------------AVDRPRNR 114 (335)
Q Consensus 53 gia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~G--i----------------~~d~~~g~ 114 (335)
+++|+|+|+.++.....+.|+++|..+++ .. .+...+.. ..+.| | .+.|+...
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~-----~~--~~~~~~~~--~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~ 155 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLE-----EQ--VIYTVDEE--WKGYGTWVANSDCTKLVGIEILKRDWQPLTSW 155 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCC-----EE--EEEECCTT--EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCC-----cE--EEEecccc--cCCCCCEEEeccCCccccccccccccCCCCcc
Confidence 37899999987666566789999965443 11 12221210 01111 1 11221111
Q ss_pred EEEEEecC-CCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC-CCc-EEE-EeCCC----CeEEEEccCCcE
Q 039428 115 LLVAFTDV-LGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-EGN-AYV-TDVVS----SKIWKVGVEGQL 186 (335)
Q Consensus 115 l~v~~~D~-~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-~G~-lyV-~d~~~----~~I~~~d~~g~~ 186 (335)
+.+ ... .......|+++|.++++....... ......++++| +|+ +++ ++... .+|+.++.++..
T Consensus 156 ~~~--~~~~~~~~~~~l~~~d~~~g~~~~~~~~------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (396)
T 3c5m_A 156 EKF--AEFYHTNPTCRLIKVDIETGELEVIHQD------TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN 227 (396)
T ss_dssp HHH--HHHHHTCCCEEEEEEETTTCCEEEEEEE------SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC
T ss_pred eee--eeeccCCCcceEEEEECCCCcEEeeccC------CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc
Confidence 211 110 001114699999988876533321 23456788889 675 444 43222 589999987654
Q ss_pred EEEecCCccccccccccccccCeEEEccCC-eEEEEEC--CC--CEEEEEeCCCCceeEEEEe-ccCCcCCCCCCeEEEc
Q 039428 187 LSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHM--CS--GNLFKIDIRKEEEEVKLIE-LRGGSSLSLGDGLALL 260 (335)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~--~~--~~v~~~d~~~~~~~~~~~~-~~g~~~~~~pdGia~d 260 (335)
.+.+.. .. ....+..++++||| .|+++.. .. +.|+++|+.++ ....+. ..+ .. +++.
T Consensus 228 ~~~l~~---~~-----~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~------~~-~~~s 290 (396)
T 3c5m_A 228 VRKIKE---HA-----EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL--ENEEVMVMPP------CS-HLMS 290 (396)
T ss_dssp CEESSC---CC-----TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC--CEEEEEECCS------EE-EEEE
T ss_pred eeEeec---cC-----CCccccceEECCCCCEEEEEecCCCCccceEEEEECCCC--CeEEeeeCCC------CC-CCcc
Confidence 332211 00 01236678999999 5655432 23 34999999876 333332 221 11 7788
Q ss_pred C-CCcEEEE
Q 039428 261 S-PTKLVVA 268 (335)
Q Consensus 261 ~-~g~l~va 268 (335)
+ +|++++.
T Consensus 291 ~~dg~~l~~ 299 (396)
T 3c5m_A 291 NFDGSLMVG 299 (396)
T ss_dssp CSSSSEEEE
T ss_pred CCCCceEEE
Confidence 8 8886665
No 276
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.88 E-value=0.0037 Score=55.79 Aligned_cols=204 Identities=9% Similarity=-0.029 Sum_probs=117.8
Q ss_pred ceeeeEEcC--CCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCC-CeEEEEEecCCCCc
Q 039428 50 LCETAKWDD--VGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPR-NRLLVAFTDVLGNK 126 (335)
Q Consensus 50 ~pegia~d~--~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~-g~l~v~~~D~~~~~ 126 (335)
...+++|.+ ++++++....+++|..||..++.. .. .....+.. .....++++|+. +.++++.. ..
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~-----~~--~~~~~~h~-~~V~~v~~~p~~~g~~lasgs-~D--- 126 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW-----EK--SHEHAGHD-SSVNSVCWAPHDYGLILACGS-SD--- 126 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC-----CE--EEEECCCS-SCCCEEEECCTTTCSCEEEEC-SS---
T ss_pred cEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc-----eE--EEEccCCC-CceEEEEECCCCCCcEEEEEc-CC---
Confidence 456889975 377777778899999998654431 10 11112111 256789998742 55555422 21
Q ss_pred cceEEEEECCCCe-EEEEeecCCCccCCCCCCceeECCC-----------------CcEEEEeCCCCeEEEEccCCc--E
Q 039428 127 YSALAAYDLSTWK-RLFLTQLSGKSEEKSTADDIAVDAE-----------------GNAYVTDVVSSKIWKVGVEGQ--L 186 (335)
Q Consensus 127 ~~~v~~~d~~~~~-~~~~~~~~~~~~~~~~p~~~~vd~~-----------------G~lyV~d~~~~~I~~~d~~g~--~ 186 (335)
..|..||.+++. ......... . ....+.+++.|+ ++.+++.+..+.|..+|.... .
T Consensus 127 -~~i~lwd~~~~~~~~~~~~~~~--h-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~ 202 (316)
T 3bg1_A 127 -GAISLLTYTGEGQWEVKKINNA--H-TIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQW 202 (316)
T ss_dssp -SCEEEEEECSSSCEEECCBTTS--S-SSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCE
T ss_pred -CCEEEEecCCCCCcceeeeecc--c-cCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcc
Confidence 358888887652 211111111 1 233456677665 457777777787777776532 1
Q ss_pred EEEecCCccccccccccccccCeEEEccCC----eEEEEECCCCEEEEEeCCCCc---eeEEEEeccCCcCCCCCCeEEE
Q 039428 187 LSIIRSPLFTAKEWYKNVFGLNGIVYHPDG----FLIVIHMCSGNLFKIDIRKEE---EEVKLIELRGGSSLSLGDGLAL 259 (335)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg----~Lyvad~~~~~v~~~d~~~~~---~~~~~~~~~g~~~~~~pdGia~ 259 (335)
... . .+.. .....+.++++|++ .++++-..+++|...+..... .....+.... .....+++
T Consensus 203 ~~~-~--~l~~-----h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~----~~v~~v~~ 270 (316)
T 3bg1_A 203 KEE-Q--KLEA-----HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFN----DVVWHVSW 270 (316)
T ss_dssp EEE-E--CCBC-----CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECS----SCEEEEEE
T ss_pred cee-e--eccc-----CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCC----CcEEEEEE
Confidence 111 0 1111 11236889999986 677888889999988876521 0112222111 23568999
Q ss_pred cCCCcEEEEecCCCeEEEEEcC
Q 039428 260 LSPTKLVVAGNPYPSARLVESS 281 (335)
Q Consensus 260 d~~g~l~va~~~~~~~~v~~~~ 281 (335)
.++|+++++....+.+++.+..
T Consensus 271 sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 271 SITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CTTTCCEEEEESSSCEEEEEEC
T ss_pred cCCCCEEEEEcCCCeEEEEEEC
Confidence 9999876664444668877754
No 277
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.87 E-value=0.0055 Score=55.74 Aligned_cols=75 Identities=15% Similarity=0.140 Sum_probs=56.3
Q ss_pred CCCCceeECCCCcEEEEeCCCCe-EEEEccC-CcEEEEecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEE
Q 039428 154 STADDIAVDAEGNAYVTDVVSSK-IWKVGVE-GQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKI 231 (335)
Q Consensus 154 ~~p~~~~vd~~G~lyV~d~~~~~-I~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~ 231 (335)
...+.++++|+|++.++.+..+. |..+|.. ++....+..... ....+.++++|||.++++-..++.|..+
T Consensus 196 ~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h--------~~~v~~~~~s~~~~~l~s~s~d~~v~iw 267 (355)
T 3vu4_A 196 NPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD--------RADVVDMKWSTDGSKLAVVSDKWTLHVF 267 (355)
T ss_dssp SCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC--------CSCEEEEEECTTSCEEEEEETTCEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--------CCcEEEEEECCCCCEEEEEECCCEEEEE
Confidence 45678999999999999888897 9999986 555443321101 1237899999999877777788999999
Q ss_pred eCCCC
Q 039428 232 DIRKE 236 (335)
Q Consensus 232 d~~~~ 236 (335)
|+...
T Consensus 268 ~~~~~ 272 (355)
T 3vu4_A 268 EIFND 272 (355)
T ss_dssp ESSCC
T ss_pred EccCC
Confidence 98764
No 278
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.85 E-value=0.01 Score=59.41 Aligned_cols=84 Identities=14% Similarity=0.147 Sum_probs=46.9
Q ss_pred CEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCCcEEEEEeeeecCCCCCcceEEE
Q 039428 226 GNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDGWETASVVAKFNGPTHRVATAAT 305 (335)
Q Consensus 226 ~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va 305 (335)
+.|..+|+.+++ .+..++... ....|......|.+|++. ..+.++.++...| +.+-++..+.....+-++
T Consensus 455 g~l~A~D~~tG~-~~W~~~~~~----~~~~g~~~tagglvf~gt-~dg~l~a~D~~tG----~~lw~~~~~~~~~~~p~t 524 (689)
T 1yiq_A 455 GKLIAWDPVKQQ-AAWEVPYVT----IFNGGTLSTAGNLVFEGS-ADGRVIAYAADTG----EKLWEQPAASGVMAAPVT 524 (689)
T ss_dssp EEEEEEETTTTE-EEEEEEESS----SCCCCEEEETTTEEEEEC-TTSEEEEEETTTC----CEEEEEECSSCCCSCCEE
T ss_pred eeEEEEECCCCC-eEeEccCCC----CccCccceECCCEEEEEC-CCCcEEEEECCCC----ccceeeeCCCCcccCceE
Confidence 779999998874 333344321 112244444555666664 3477888887766 233333323222222355
Q ss_pred E-eCCeEEEEeccCC
Q 039428 306 V-KDGRVYLSHLLGL 319 (335)
Q Consensus 306 ~-~~g~lyV~~~~~~ 319 (335)
+ .+|+.||+...|.
T Consensus 525 y~~~G~qyv~~~~G~ 539 (689)
T 1yiq_A 525 YSVDGEQYVTFMAGW 539 (689)
T ss_dssp EEETTEEEEEEEECC
T ss_pred EEECCEEEEEEEecC
Confidence 5 5899999655553
No 279
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.80 E-value=0.015 Score=54.07 Aligned_cols=188 Identities=13% Similarity=0.093 Sum_probs=108.7
Q ss_pred EEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEE
Q 039428 55 KWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYD 134 (335)
Q Consensus 55 a~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d 134 (335)
++..+++.++++..++.|..||..+++. .. .+.... .....+.++ ++.|+++..| +.|..||
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~----~~---~~~~h~---~~v~~l~~~--~~~l~sg~~d------g~i~vwd 199 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLEC----KR---ILTGHT---GSVLCLQYD--ERVIITGSSD------STVRVWD 199 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCE----EE---EECCCS---SCEEEEECC--SSEEEEEETT------SCEEEEE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeE----EE---EEcCCC---CcEEEEEEC--CCEEEEEcCC------CeEEEEE
Confidence 4556788888878899999999654441 11 221111 244566663 4445553322 3599999
Q ss_pred CCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcE-EEEecCCccccccccccccccCeEEEc
Q 039428 135 LSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQL-LSIIRSPLFTAKEWYKNVFGLNGIVYH 213 (335)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~-~~~~~~~~~~~~~~~~~~~~p~Gia~~ 213 (335)
.++++....... . ......++++ ++.+++.+..+.|..+|..... ..... .+.. .....+.+++
T Consensus 200 ~~~~~~~~~~~~--h---~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~--~~~~-----~~~~v~~~~~- 264 (435)
T 1p22_A 200 VNTGEMLNTLIH--H---CEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRR--VLVG-----HRAAVNVVDF- 264 (435)
T ss_dssp SSSCCEEEEECC--C---CSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEE--EECC-----CSSCEEEEEE-
T ss_pred CCCCcEEEEEcC--C---CCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeee--EecC-----CCCcEEEEEe-
Confidence 998876643322 1 2344556664 4466777778899999876432 11000 0110 1122456666
Q ss_pred cCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 214 PDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 214 ~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
++..+++-..++.|..+|....+ ....+.... .....++++ ++++++....+.+++.+...+
T Consensus 265 -~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~----~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 265 -DDKYIVSASGDRTIKVWNTSTCE-FVRTLNGHK----RGIACLQYR--DRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp -ETTEEEEEETTSEEEEEETTTCC-EEEEEECCS----SCEEEEEEE--TTEEEEEETTSCEEEEETTTC
T ss_pred -CCCEEEEEeCCCeEEEEECCcCc-EEEEEcCCC----CcEEEEEeC--CCEEEEEeCCCeEEEEECCCC
Confidence 56555566678999999998874 444454221 223455553 555666444477888887654
No 280
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.79 E-value=0.015 Score=50.80 Aligned_cols=205 Identities=11% Similarity=0.013 Sum_probs=106.6
Q ss_pred CcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 48 SFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 48 ~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
...-.+++|+++|+.++++..++.|..|+..+++ .+. ...... .....+..+ +.+.++....
T Consensus 67 ~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~----~~~---~~~~h~---~~~~~~~~~---~~~l~s~~~~----- 128 (318)
T 4ggc_A 67 GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK----RLR---NMTSHS---ARVGSLSWN---SYILSSGSRS----- 128 (318)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE----EEE---EEECCS---SCEEEEEEE---TTEEEEEETT-----
T ss_pred CCeEEEEEECCCCCEEEEEECCCcEEEeecCCce----eEE---EecCcc---ceEEEeecC---CCEEEEEecC-----
Confidence 3345789999999988888889999999965444 121 221111 122333333 3343322211
Q ss_pred ceEEEEECCCCeEE-EEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcE------EE------------
Q 039428 128 SALAAYDLSTWKRL-FLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQL------LS------------ 188 (335)
Q Consensus 128 ~~v~~~d~~~~~~~-~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~------~~------------ 188 (335)
..+..++...+... ..... . ......+++.++|+.+++....+.|..+|..... ..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 203 (318)
T 4ggc_A 129 GHIHHHDVRVAEHHVATLSG----H-SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVA 203 (318)
T ss_dssp SEEEEEETTSSSCEEEEEEC----C-SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEE
T ss_pred CceEeeecCCCceeEEEEcC----c-cCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEE
Confidence 23555555543222 11111 0 2334456666666666665555666665543210 00
Q ss_pred ---------------------EecCCccccccccccccccCeEEEccCC-eEEEEE-CCCCEEEEEeCCCCceeEEEEec
Q 039428 189 ---------------------IIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIH-MCSGNLFKIDIRKEEEEVKLIEL 245 (335)
Q Consensus 189 ---------------------~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad-~~~~~v~~~d~~~~~~~~~~~~~ 245 (335)
++...................+++.+++ .++++. ..++.|..+|...++ .+..+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~-~~~~l~- 281 (318)
T 4ggc_A 204 WCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA-KVAELK- 281 (318)
T ss_dssp ECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC-EEEEEC-
T ss_pred ecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc-EEEEEc-
Confidence 0000000000000111235667788877 555443 357889999988764 444443
Q ss_pred cCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEc
Q 039428 246 RGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVES 280 (335)
Q Consensus 246 ~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~ 280 (335)
+ + -.....+++.++|.++++....+.+++.+.
T Consensus 282 -g-H-~~~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 282 -G-H-TSRVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp -C-C-SSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred -C-C-CCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 2 2 133578899999987777554566777654
No 281
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.78 E-value=0.025 Score=52.70 Aligned_cols=187 Identities=13% Similarity=0.184 Sum_probs=110.8
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceE
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSAL 130 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v 130 (335)
..+++++ ++.++++..++.|..||..+++ .+. .+.... .....+.++ ++.++++..| +.|
T Consensus 162 v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~----~~~---~~~~h~---~~v~~~~~~--~~~l~s~s~d------g~i 221 (445)
T 2ovr_B 162 VWSSQMR--DNIIISGSTDRTLKVWNAETGE----CIH---TLYGHT---STVRCMHLH--EKRVVSGSRD------ATL 221 (445)
T ss_dssp EEEEEEE--TTEEEEEETTSCEEEEETTTTE----EEE---EECCCS---SCEEEEEEE--TTEEEEEETT------SEE
T ss_pred EEEEEec--CCEEEEEeCCCeEEEEECCcCc----EEE---EECCCC---CcEEEEEec--CCEEEEEeCC------CEE
Confidence 3566776 5667777788999999965443 111 221111 245677886 3556664333 369
Q ss_pred EEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCc-EEEEecCCccccccccccccccCe
Q 039428 131 AAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLFTAKEWYKNVFGLNG 209 (335)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~~~~~~~~~~~~p~G 209 (335)
..||..+++....... . ......+++ +|+.+++.+..+.|..+|.... ....+.. .......
T Consensus 222 ~~wd~~~~~~~~~~~~--~---~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----------~~~~v~~ 284 (445)
T 2ovr_B 222 RVWDIETGQCLHVLMG--H---VAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQG----------HTNRVYS 284 (445)
T ss_dssp EEEESSSCCEEEEEEC--C---SSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECC----------CSSCEEE
T ss_pred EEEECCCCcEEEEEcC--C---cccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecC----------CCCceEE
Confidence 9999998876643322 1 234455666 5666777777889999997643 3332211 0112456
Q ss_pred EEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 210 IVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 210 ia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
+++ ++..+++-..++.|..+|...++ ....+. + . ......+.+ +++++++....+.+++.+...+
T Consensus 285 ~~~--~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~--~-~-~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 285 LQF--DGIHVVSGSLDTSIRVWDVETGN-CIHTLT--G-H-QSLTSGMEL--KDNILVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp EEE--CSSEEEEEETTSCEEEEETTTCC-EEEEEC--C-C-CSCEEEEEE--ETTEEEEEETTSCEEEEETTTC
T ss_pred EEE--CCCEEEEEeCCCeEEEEECCCCC-EEEEEc--C-C-cccEEEEEE--eCCEEEEEeCCCeEEEEECCCC
Confidence 666 67555566678889999998764 444443 2 1 122344555 4555555444467888887654
No 282
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.73 E-value=0.029 Score=52.18 Aligned_cols=191 Identities=14% Similarity=0.116 Sum_probs=113.0
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
...+++++ ++.+++...++.|..||..+++ .+. .+.... .....+.++ +..++++..| +.
T Consensus 201 ~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~----~~~---~~~~~~---~~v~~~~~~--~~~l~~~~~d------g~ 260 (445)
T 2ovr_B 201 TVRCMHLH--EKRVVSGSRDATLRVWDIETGQ----CLH---VLMGHV---AAVRCVQYD--GRRVVSGAYD------FM 260 (445)
T ss_dssp CEEEEEEE--TTEEEEEETTSEEEEEESSSCC----EEE---EEECCS---SCEEEEEEC--SSCEEEEETT------SC
T ss_pred cEEEEEec--CCEEEEEeCCCEEEEEECCCCc----EEE---EEcCCc---ccEEEEEEC--CCEEEEEcCC------CE
Confidence 34677775 4567777889999999965444 121 221111 245677774 4556554332 35
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccC-CcEEEEecCCccccccccccccccC
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVE-GQLLSIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~p~ 208 (335)
|..||.++++....... . ......+.+ +|+.+++.+..+.|..+|.. ++....+... .....
T Consensus 261 i~iwd~~~~~~~~~~~~--~---~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----------~~~v~ 323 (445)
T 2ovr_B 261 VKVWDPETETCLHTLQG--H---TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH----------QSLTS 323 (445)
T ss_dssp EEEEEGGGTEEEEEECC--C---SSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCC----------CSCEE
T ss_pred EEEEECCCCcEeEEecC--C---CCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCC----------cccEE
Confidence 99999988876644322 1 234455666 67777777778999999976 4443322110 01133
Q ss_pred eEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcCCC
Q 039428 209 GIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 209 Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~~~ 283 (335)
.+++ ++.++++-..++.|..+|+..++ ....+...... ......++++ ++++++....+.+++.+...+
T Consensus 324 ~~~~--~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~-~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 324 GMEL--KDNILVSGNADSTVKIWDIKTGQ-CLQTLQGPNKH-QSAVTCLQFN--KNFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp EEEE--ETTEEEEEETTSCEEEEETTTCC-EEEEECSTTSC-SSCEEEEEEC--SSEEEEEETTSEEEEEETTTC
T ss_pred EEEE--eCCEEEEEeCCCeEEEEECCCCc-EEEEEccCCCC-CCCEEEEEEC--CCEEEEEeCCCeEEEEECCCC
Confidence 4444 56566666678899999998764 44555421111 1224566665 455555444577888887665
No 283
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.72 E-value=0.00018 Score=61.29 Aligned_cols=102 Identities=16% Similarity=0.152 Sum_probs=68.3
Q ss_pred CCCCCceeECCCCcEEEEeCCCCeEEEEccCCc-------EEEEecCCccccccccccccccCeEEEccCCeEEEEECCC
Q 039428 153 KSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQ-------LLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCS 225 (335)
Q Consensus 153 ~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~-------~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~ 225 (335)
.....+++++|+|+||.. .++.+|++++... ..+.+++. .-.+-..+.++++|.||+. .+
T Consensus 40 w~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~---------Gw~~F~a~~fD~~G~LYav--~d 106 (236)
T 1tl2_A 40 WSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNG---------GWNQFQFLFFDPNGYLYAV--SK 106 (236)
T ss_dssp CTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECS---------CGGGCSEEEECTTSCEEEE--ET
T ss_pred cccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccc---------ccccceEEEECCCCCEEEe--CC
Confidence 456679999999999999 6779999998431 11222211 0112468999999999988 44
Q ss_pred CEEEEEeC--CCCc---eeEEEEeccCCcCCCCCCeEEEcCCCcEEEEec
Q 039428 226 GNLFKIDI--RKEE---EEVKLIELRGGSSLSLGDGLALLSPTKLVVAGN 270 (335)
Q Consensus 226 ~~v~~~d~--~~~~---~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~ 270 (335)
++|+|+++ ++.. .....|...+ ...-+-+.++++|.||.+..
T Consensus 107 G~iyr~~pP~~~~~~Wl~~a~~vg~~g---w~~~~~lff~p~G~Lyav~d 153 (236)
T 1tl2_A 107 DKLYKASPPQSDTDNWIARATEVGSGG---WSGFKFLFFHPNGYLYAVHG 153 (236)
T ss_dssp TEEEEESCCCSTTCCHHHHSEEEECSS---GGGEEEEEECTTSCEEEEET
T ss_pred CEEEEeCCCcCCCCceeccccEeccCC---CCceEEEEECCCceEEEEeC
Confidence 99999987 3321 0112332222 12237899999999999983
No 284
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.66 E-value=0.0038 Score=62.82 Aligned_cols=153 Identities=8% Similarity=0.048 Sum_probs=84.0
Q ss_pred eeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCC--CcceEEEeCCCCeEEEEEecCCCC---c
Q 039428 52 ETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGN--ATMGIAVDRPRNRLLVAFTDVLGN---K 126 (335)
Q Consensus 52 egia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~--~p~Gi~~d~~~g~l~v~~~D~~~~---~ 126 (335)
.+++|.++|..++.+ ++.|..+|..+++ .. .++........ ....+.++|+...|.....+.... .
T Consensus 20 ~~~~w~~dg~~~~~~--~~~i~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGN-----SS--VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCEEECSSSEEEEEE--TTEEEEEETTTCC-----EE--EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred cccEECCCCcEEEEc--CCcEEEEECCCCc-----eE--EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 488999999766665 8899999975554 11 23332221111 124578898545555543321110 0
Q ss_pred cceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCCcEEEEecC-Cc----ccc-cc
Q 039428 127 YSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEGQLLSIIRS-PL----FTA-KE 199 (335)
Q Consensus 127 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g~~~~~~~~-~~----~~~-~~ 199 (335)
...++.+|.++++... +... .......+++|||+ +.++ ..+.|+.++.++...+.+.. +. +.. ++
T Consensus 91 ~~~~~~~d~~~~~~~~---l~~~---~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~ 162 (740)
T 4a5s_A 91 TASYDIYDLNKRQLIT---EERI---PNNTQWVTWSPVGHKLAYV--WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITD 162 (740)
T ss_dssp EEEEEEEETTTTEECC---SSCC---CTTEEEEEECSSTTCEEEE--ETTEEEEESSTTSCCEECCSCCBTTTEEESBCC
T ss_pred ceEEEEEECCCCcEEE---cccC---CCcceeeEECCCCCEEEEE--ECCeEEEEECCCCceEEEcCCCCccceecCccc
Confidence 1358899999987642 2111 23445788999996 3333 23689999887544332211 00 000 00
Q ss_pred ---ccccccccCeEEEccCC-eEEEE
Q 039428 200 ---WYKNVFGLNGIVYHPDG-FLIVI 221 (335)
Q Consensus 200 ---~~~~~~~p~Gia~~~dg-~Lyva 221 (335)
.+..+....+++++||| +|.++
T Consensus 163 ~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 163 WVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp HHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred ccccchhcCCCcceEECCCCCEEEEE
Confidence 00001234579999999 56554
No 285
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.65 E-value=0.0016 Score=59.26 Aligned_cols=169 Identities=6% Similarity=-0.063 Sum_probs=92.9
Q ss_pred ceeeeEEcC-CCC-EEEEEe-cC----CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecC
Q 039428 50 LCETAKWDD-VGR-RFLVSF-LD----GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDV 122 (335)
Q Consensus 50 ~pegia~d~-~g~-~~~~~~-~~----~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~ 122 (335)
....++|+| +|+ ++|++. .. .+|+.++..++. .. .+. ... ....+..++++|++..|+.+..+.
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-----~~--~l~-~~~-~~~~~~~~~~spdg~~l~~~~~~~ 259 (396)
T 3c5m_A 189 WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN-----VR--KIK-EHA-EGESCTHEFWIPDGSAMAYVSYFK 259 (396)
T ss_dssp CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC-----CE--ESS-CCC-TTEEEEEEEECTTSSCEEEEEEET
T ss_pred ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc-----ee--Eee-ccC-CCccccceEECCCCCEEEEEecCC
Confidence 456889999 676 444443 22 479999853332 11 121 110 012356778998544565543322
Q ss_pred CCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECC-CCcEEEEeC----------------CCCeEEEEccCCc
Q 039428 123 LGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDA-EGNAYVTDV----------------VSSKIWKVGVEGQ 185 (335)
Q Consensus 123 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~-~G~lyV~d~----------------~~~~I~~~d~~g~ 185 (335)
.... ..|+++|+++++........ . .+ +++.+ ||++++... ....|+++|.+++
T Consensus 260 ~~~~-~~l~~~d~~~g~~~~l~~~~--~-----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 260 GQTD-RVIYKANPETLENEEVMVMP--P-----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp TTCC-EEEEEECTTTCCEEEEEECC--S-----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred CCcc-ceEEEEECCCCCeEEeeeCC--C-----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 2111 34999999988765433331 1 12 78888 998666532 3478999998754
Q ss_pred EEEEecCCcccccc-ccccccccCeEEEccCC-eEEEEECC--CCEEEEEeCCCC
Q 039428 186 LLSIIRSPLFTAKE-WYKNVFGLNGIVYHPDG-FLIVIHMC--SGNLFKIDIRKE 236 (335)
Q Consensus 186 ~~~~~~~~~~~~~~-~~~~~~~p~Gia~~~dg-~Lyvad~~--~~~v~~~d~~~~ 236 (335)
....+......... ..........++++||| .|+++... ..+||+++++++
T Consensus 331 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 331 SAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPES 385 (396)
T ss_dssp BCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTT
T ss_pred ceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccc
Confidence 43222110000000 00001124567899999 77766543 347999998876
No 286
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.65 E-value=0.0013 Score=56.06 Aligned_cols=150 Identities=13% Similarity=0.104 Sum_probs=87.7
Q ss_pred CcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCe-EEE---EeecCCCccCCCCCCceeECCCCcEEEEeCCCCeE
Q 039428 102 ATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWK-RLF---LTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKI 177 (335)
Q Consensus 102 ~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~-~~~---~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I 177 (335)
....++++| +|.||++ .+ ..|+++++.+++ ..+ ...+... +-+....+.+|++|++|++ ..+.|
T Consensus 42 ~~~~laf~P-~G~LYaV-~~------G~Ly~~~~~t~~~~~W~~s~t~IG~~--Gw~~F~a~~fD~~G~LYav--~dG~i 109 (236)
T 1tl2_A 42 NFKFLFLSP-GGELYGV-LN------DKIYKGTPPTHDNDNWMGRAKKIGNG--GWNQFQFLFFDPNGYLYAV--SKDKL 109 (236)
T ss_dssp TCSEEEECT-TSCEEEE-ET------TEEEEESCCCSTTCCHHHHCEEEECS--CGGGCSEEEECTTSCEEEE--ETTEE
T ss_pred cceeEEECC-CccEEEE-eC------CeEEEECCCCCCcccccccccEeccc--ccccceEEEECCCCCEEEe--CCCEE
Confidence 456999998 9999996 22 359999986521 000 0111000 1234667999999999999 34999
Q ss_pred EEEcc--CCcEE-----EEecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEE-eCCCCc----eeEEEEec
Q 039428 178 WKVGV--EGQLL-----SIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKI-DIRKEE----EEVKLIEL 245 (335)
Q Consensus 178 ~~~d~--~g~~~-----~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~-d~~~~~----~~~~~~~~ 245 (335)
+|+++ ++... ..+++.. -....-|.++|+|.||... +++++|- .+.+.. .....+..
T Consensus 110 yr~~pP~~~~~~Wl~~a~~vg~~g---------w~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~ 178 (236)
T 1tl2_A 110 YKASPPQSDTDNWIARATEVGSGG---------WSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQ 178 (236)
T ss_dssp EEESCCCSTTCCHHHHSEEEECSS---------GGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEES
T ss_pred EEeCCCcCCCCceeccccEeccCC---------CCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceecc
Confidence 99998 33221 1111110 1125789999999999887 6667663 222221 01122221
Q ss_pred cCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEE
Q 039428 246 RGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVE 279 (335)
Q Consensus 246 ~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~ 279 (335)
.+.. .++ =+.++++|+||.++. ..+....
T Consensus 179 ~g~~--~yr-~l~f~~~G~l~~v~~--g~~Y~~~ 207 (236)
T 1tl2_A 179 GGWD--TFK-FLFFSSVGTLFGVQG--GKFYEDY 207 (236)
T ss_dssp SSGG--GEE-EEEECTTSCEEEEET--TEEEEES
T ss_pred CCcc--eEE-EEEECCCCcEEEEeC--CeEEecC
Confidence 2211 112 266888899888874 5554443
No 287
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.63 E-value=0.0011 Score=64.18 Aligned_cols=201 Identities=13% Similarity=0.103 Sum_probs=119.2
Q ss_pred eeeeEEcCC------CCEEEEEecCCeEEEEECCCCCCCcc-e--eee-eEEeecCCcCCCCcceEEEeCCCCeEEEEEe
Q 039428 51 CETAKWDDV------GRRFLVSFLDGGVGQVLVPDEYSPGT-V--LEE-VKLVKEDDVVGNATMGIAVDRPRNRLLVAFT 120 (335)
Q Consensus 51 pegia~d~~------g~~~~~~~~~~~I~~~d~~~g~~~~~-v--~~~-~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~ 120 (335)
...++|.|+ ++++.+...+++|..||...+..... . +.+ ...+... ......+++++ .+.|..+..
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h---~~~v~sv~~s~-~~~lasgs~ 285 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLA---DSLITTFDFLS-PTTVVCGFK 285 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCT---TTCEEEEEESS-SSEEEEEET
T ss_pred EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcC---CCCEEEEEecC-CCeEEEEeC
Confidence 567899986 45666668889999998654421000 0 000 0011111 13467888886 566555433
Q ss_pred cCCCCccceEEEEECCCCe-EEEEeecCCCccCCCCCCce--eECCCC-cEEEEeCCCCeEEEEccCCc-EEEEecCCcc
Q 039428 121 DVLGNKYSALAAYDLSTWK-RLFLTQLSGKSEEKSTADDI--AVDAEG-NAYVTDVVSSKIWKVGVEGQ-LLSIIRSPLF 195 (335)
Q Consensus 121 D~~~~~~~~v~~~d~~~~~-~~~~~~~~~~~~~~~~p~~~--~vd~~G-~lyV~d~~~~~I~~~d~~g~-~~~~~~~~~~ 195 (335)
| +.|..||.++++ ....... . ....+.+ ++.++| +++++.+..+.|..+|.... ....+. ...
T Consensus 286 D------gtV~lWD~~~~~~~~~~~~~----H-~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~-~~~ 353 (524)
T 2j04_B 286 N------GFVAEFDLTDPEVPSFYDQV----H-DSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTV-SRF 353 (524)
T ss_dssp T------SEEEEEETTBCSSCSEEEEC----S-SSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEE-EEC
T ss_pred C------CEEEEEECCCCCCceEEeec----c-cccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccc-ccc
Confidence 3 369999998653 2111111 1 2345667 457788 89999899999999997532 111110 000
Q ss_pred ccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeE
Q 039428 196 TAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSA 275 (335)
Q Consensus 196 ~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~ 275 (335)
.......++++|++..+++-...+.|..+|+.... ....+. + . ......+++.|+|.++++....+.+
T Consensus 354 -------~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~-~~~~l~--g-H-~~~V~sva~Sp~g~~l~Sgs~Dgtv 421 (524)
T 2j04_B 354 -------RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAF-AVHPLV--S-R-ETTITAIGVSRLHPMVLAGSADGSL 421 (524)
T ss_dssp -------SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTT-CCEEEE--E-C-SSCEEEEECCSSCCBCEEEETTTEE
T ss_pred -------ccCcccceEeCCCcCeEEEeCCCCcEEEEECcccc-cceeee--c-C-CCceEEEEeCCCCCeEEEEECCCEE
Confidence 00125689999999778888888889999988763 333333 2 1 1335788888888776665544556
Q ss_pred EEEE
Q 039428 276 RLVE 279 (335)
Q Consensus 276 ~v~~ 279 (335)
++.+
T Consensus 422 ~lwd 425 (524)
T 2j04_B 422 IITN 425 (524)
T ss_dssp ECCB
T ss_pred EEEe
Confidence 5544
No 288
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.63 E-value=0.011 Score=54.59 Aligned_cols=210 Identities=10% Similarity=-0.002 Sum_probs=111.7
Q ss_pred ceeeeEEcC--------CCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEec
Q 039428 50 LCETAKWDD--------VGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTD 121 (335)
Q Consensus 50 ~pegia~d~--------~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D 121 (335)
.-.+++|.| +|+++.....+++|..||..++.. .. ...... .....++++|++.+++++ +.
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~----~~--~~~~~~----~~v~~v~~~p~~~~~l~~-~~ 206 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP----IL--AGYPLS----SPGISVQFRPSNPNQLIV-GE 206 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE----EE--EEEECS----SCEEEEEEETTEEEEEEE-EE
T ss_pred ceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce----ee--eecCCC----CCcEEEEECCCCCceEEe-cC
Confidence 457889986 677666668899999998543331 11 122222 245789999844445443 22
Q ss_pred CCCCccceEEEEECCCCeEEEEeecC--------------CC------ccCCCCCCceeEC-CCCcEEEEeCCCCeEEEE
Q 039428 122 VLGNKYSALAAYDLSTWKRLFLTQLS--------------GK------SEEKSTADDIAVD-AEGNAYVTDVVSSKIWKV 180 (335)
Q Consensus 122 ~~~~~~~~v~~~d~~~~~~~~~~~~~--------------~~------~~~~~~p~~~~vd-~~G~lyV~d~~~~~I~~~ 180 (335)
.. ..|..||..+++........ .. .........+++. ++|+..++.+..+.+..+
T Consensus 207 ~d----~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vw 282 (393)
T 4gq1_A 207 RN----GNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRW 282 (393)
T ss_dssp TT----SEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEE
T ss_pred CC----CEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEE
Confidence 21 46999999877543111000 00 0001233445554 788888888888899888
Q ss_pred ccCCcE-EEEecC-------Ccccccc-ccccccccCeEEEccC--CeEEEEECCCCEEEEEeCCCCceeEEEEeccCCc
Q 039428 181 GVEGQL-LSIIRS-------PLFTAKE-WYKNVFGLNGIVYHPD--GFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGS 249 (335)
Q Consensus 181 d~~g~~-~~~~~~-------~~~~~~~-~~~~~~~p~Gia~~~d--g~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~ 249 (335)
|..... ...+.. ..+.... .........+.++.+. +.+.++-..+++|..+|...++ .........
T Consensus 283 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~-~~~~~~~~~-- 359 (393)
T 4gq1_A 283 NLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKD-SNSIPIQLG-- 359 (393)
T ss_dssp EC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTT-CCEEEEECS--
T ss_pred ECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCc-EEEEecCCC--
Confidence 865322 111100 0000000 0011122344555553 3555677778999999998764 222222111
Q ss_pred CCCCCCeEEEcCCCcEEEEecCCCeEEEEEc
Q 039428 250 SLSLGDGLALLSPTKLVVAGNPYPSARLVES 280 (335)
Q Consensus 250 ~~~~pdGia~d~~g~l~va~~~~~~~~v~~~ 280 (335)
.....+++.++|+++++... +++.++++
T Consensus 360 --~~V~svafspdG~~LA~as~-~Gv~lvrL 387 (393)
T 4gq1_A 360 --MPIVDFCWHQDGSHLAIATE-GSVLLTRL 387 (393)
T ss_dssp --SCEEEEEECTTSSEEEEEES-SEEEEEEE
T ss_pred --CcEEEEEEcCCCCEEEEEeC-CCeEEEEE
Confidence 22578999999986666442 55666664
No 289
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.62 E-value=0.015 Score=58.05 Aligned_cols=204 Identities=11% Similarity=0.053 Sum_probs=108.9
Q ss_pred eeeEEcCCCCEEEEEecCC----------------eEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeE
Q 039428 52 ETAKWDDVGRRFLVSFLDG----------------GVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRL 115 (335)
Q Consensus 52 egia~d~~g~~~~~~~~~~----------------~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l 115 (335)
.+++|+|+|+.++.+...+ .|++++..++.. +...+...+... ....++.+++++..|
T Consensus 174 ~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~-----~~~~v~~~~~~~-~~~~~~~~SpDg~~l 247 (710)
T 2xdw_A 174 SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQS-----EDILCAEFPDEP-KWMGGAELSDDGRYV 247 (710)
T ss_dssp CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGG-----GCEEEECCTTCT-TCEEEEEECTTSCEE
T ss_pred ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcc-----cceEEeccCCCC-eEEEEEEEcCCCCEE
Confidence 5799999998777663322 399998643331 111122222111 234688899855555
Q ss_pred EEEEecCCCCccceEEEEECCC------C--eEEEEeecCCCccCCCCCCceeECCCCc-EEEEeC---CCCeEEEEccC
Q 039428 116 LVAFTDVLGNKYSALAAYDLST------W--KRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDV---VSSKIWKVGVE 183 (335)
Q Consensus 116 ~v~~~D~~~~~~~~v~~~d~~~------~--~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~---~~~~I~~~d~~ 183 (335)
++...+.... .+.|+.+|.++ + ........ .. ..--.++++|. +|+... .+.+|++++.+
T Consensus 248 ~~~~~~~~~~-~~~l~~~d~~~~~~~~~~~~~~~~l~~~------~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 319 (710)
T 2xdw_A 248 LLSIREGCDP-VNRLWYCDLQQESNGITGILKWVKLIDN------FE-GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFT 319 (710)
T ss_dssp EEEEECSSSS-CCEEEEEEGGGSSSSSCSSCCCEEEECS------SS-SCEEEEEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred EEEEEccCCC-ccEEEEEECcccccccCCccceEEeeCC------CC-cEEEEEeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 5543322110 15799999876 4 23222111 01 11124667764 666543 25689999987
Q ss_pred CcE----EEEecCCccccccccccccccCeEEEccCCeEEEEECCCC--EEEEEeCCCCceeEEEEeccCCcCCCCCCeE
Q 039428 184 GQL----LSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSG--NLFKIDIRKEEEEVKLIELRGGSSLSLGDGL 257 (335)
Q Consensus 184 g~~----~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~--~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGi 257 (335)
+.. ..++... ......+++++++++|+++...++ +|+++++..++ ..+.+.... ....++
T Consensus 320 ~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~-~~~~l~~~~----~~v~~~ 385 (710)
T 2xdw_A 320 DPEESKWKVLVPEH---------EKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA-LLKIFPLEV----GSVVGY 385 (710)
T ss_dssp SCCGGGCEEEECCC---------SSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC-EEEEECCCS----SEEEEE
T ss_pred CCCcccceeccCCC---------CCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC-EEEecCCCC----ceEEEE
Confidence 532 2222110 001256788887778877765554 78999985442 445554321 224567
Q ss_pred EEcCCC-cEEEE-ec--CCCeEEEEEcCCC
Q 039428 258 ALLSPT-KLVVA-GN--PYPSARLVESSDG 283 (335)
Q Consensus 258 a~d~~g-~l~va-~~--~~~~~~v~~~~~~ 283 (335)
++++++ .++++ .. ....+..++...+
T Consensus 386 ~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 386 SGQKKDTEIFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp ECCTTCSEEEEEEECSSCCCEEEEEETTSS
T ss_pred ecCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 777776 45555 22 1135666665443
No 290
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.59 E-value=0.0049 Score=55.20 Aligned_cols=146 Identities=9% Similarity=0.041 Sum_probs=84.5
Q ss_pred eeeeEEcCCCCEEEEE-ecC----CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCC--
Q 039428 51 CETAKWDDVGRRFLVS-FLD----GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVL-- 123 (335)
Q Consensus 51 pegia~d~~g~~~~~~-~~~----~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~-- 123 (335)
...++|+|+|+.+++. ... ..|+.++..+++ .. .+...+ . ...++++|++..|+++..+..
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~-----~~--~l~~~~----~-~~~~~wspdg~~l~~~~~~~~~~ 128 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS-----SK--KILEAK----N-IRSLEWNEDSRKLLIVGFKRRED 128 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE-----EE--EEEEES----E-EEEEEECTTSSEEEEEEECCCC-
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc-----eE--EEEcCC----C-ccceeECCCCCEEEEEEccCCCc
Confidence 4578999999866555 332 359999864443 11 122222 1 567888885556666533210
Q ss_pred --------------C-----CccceEEEEECCCCeE-EEEeecCCCccCCCCCCceeECCCCcEEEEeCC---------C
Q 039428 124 --------------G-----NKYSALAAYDLSTWKR-LFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV---------S 174 (335)
Q Consensus 124 --------------~-----~~~~~v~~~d~~~~~~-~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~---------~ 174 (335)
+ .....|+++|+++++. ..... . ....+++.||| ++++... .
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-------~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~ 199 (347)
T 2gop_A 129 EDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-------P-RFSSGIWHRDK-IVVNVPHREIIPQYFKF 199 (347)
T ss_dssp --------CCCC---------CEEEEEEEETTTTEEEEEEEE-------E-TTCEEEEETTE-EEEEEECCCSSCCSSCC
T ss_pred CCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-------C-CcccccCCCCe-EEEEEeccccccccccc
Confidence 0 0125699999998876 32211 1 34578899999 6654321 3
Q ss_pred CeEEEEccCCcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECC-------CCEEEEEe
Q 039428 175 SKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMC-------SGNLFKID 232 (335)
Q Consensus 175 ~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~-------~~~v~~~d 232 (335)
..|+.++ .++...+... ... ..++||| .|++.... ..+|+.+|
T Consensus 200 ~~l~~~d-~~~~~~l~~~-------------~~~-~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 200 WDIYIWE-DGKEEKMFEK-------------VSF-YAVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EEEEEEE-TTEEEEEEEE-------------ESE-EEEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred ccEEEeC-CCceEEeccC-------------cce-eeECCCCCEEEEEEccccCCccccceEEEEC
Confidence 4799999 6554332210 011 1238899 66655432 36899999
No 291
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.58 E-value=0.016 Score=50.78 Aligned_cols=165 Identities=10% Similarity=0.008 Sum_probs=100.8
Q ss_pred CCCcceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCC
Q 039428 46 SPSFLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGN 125 (335)
Q Consensus 46 ~~~~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~ 125 (335)
+.......+++.++++.+++...++.|..||...++.. ... ...... .......++..+.+..+........ +
T Consensus 148 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~---~~~--~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~-~ 220 (318)
T 4ggc_A 148 GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG---WVP--LQTFTQ-HQGAVKAVAWCPWQSNVLATGGGTS-D 220 (318)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB---SCC--SEEECC-CCSCEEEEEECTTSTTEEEEEECTT-T
T ss_pred CccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc---ccc--eeeecc-cCCceEEEEecCCCCcEEEEEecCC-C
Confidence 33445678899999998887788999999996544310 000 111111 1124466777765555554322221 2
Q ss_pred ccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEE--eCCCCeEEEEccC-CcEEEEecCCccccccccc
Q 039428 126 KYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVT--DVVSSKIWKVGVE-GQLLSIIRSPLFTAKEWYK 202 (335)
Q Consensus 126 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~--d~~~~~I~~~d~~-g~~~~~~~~~~~~~~~~~~ 202 (335)
..|..+|............ ......+.+.++++..++ ....+.|..+|.. ++.+..+..
T Consensus 221 --~~i~lwd~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g---------- 282 (318)
T 4ggc_A 221 --RHIRIWNVCSGACLSAVDA------HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG---------- 282 (318)
T ss_dssp --CEEEEEETTTCCEEEEEEC------SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC----------
T ss_pred --CEEEEEecccccccccccc------eeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC----------
Confidence 3588899887765533222 234456788888764443 3457889999976 444443321
Q ss_pred cccccCeEEEccCCeEEEEECCCCEEEEEeCCC
Q 039428 203 NVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRK 235 (335)
Q Consensus 203 ~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~ 235 (335)
.....+.++++|||.++++-..++.|...|+..
T Consensus 283 H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 283 HTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 112378899999997777777888887777653
No 292
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.57 E-value=0.03 Score=54.85 Aligned_cols=80 Identities=8% Similarity=0.049 Sum_probs=47.3
Q ss_pred CCeEEEEccC-CcEEEEecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCC
Q 039428 174 SSKIWKVGVE-GQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLS 252 (335)
Q Consensus 174 ~~~I~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~ 252 (335)
.+.|+.+|+. |+.+...... . ..-.|.....+|.+|++ +.++.|+.+|.++++ .+..+.+.. ....
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~---~-------~~~~g~~~tagglvf~g-~~dg~l~A~D~~tG~-~lW~~~~~~-g~~a 531 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH---L-------PLWAGVLATAGNLVFTG-TGDGYFKAFDAKSGK-ELWKFQTGS-GIVS 531 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES---S-------CCCSCCEEETTTEEEEE-CTTSEEEEEETTTCC-EEEEEECSS-CCCS
T ss_pred cceEEEEECCCCCEEEEecCC---C-------CCcccceEeCCCEEEEE-CCCCcEEEEECCCCC-EEEEecCCC-Cccc
Confidence 4678888876 4443321110 0 01123333446688876 467899999998875 555566543 2123
Q ss_pred CCCeEEEcCCCcEEEE
Q 039428 253 LGDGLALLSPTKLVVA 268 (335)
Q Consensus 253 ~pdGia~d~~g~l~va 268 (335)
.| |++..+|+.||+
T Consensus 532 ~P--~~y~~~G~qYv~ 545 (582)
T 1flg_A 532 PP--ITWEQDGEQYLG 545 (582)
T ss_dssp CC--EEEEETTEEEEE
T ss_pred Cc--eEEEECCEEEEE
Confidence 33 676678998888
No 293
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.57 E-value=0.03 Score=54.70 Aligned_cols=112 Identities=10% Similarity=0.016 Sum_probs=66.6
Q ss_pred CEEEEEec-CCeEEEEEC-CCCCCCcceeeeeEEeecCCcC-C--------CCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 61 RRFLVSFL-DGGVGQVLV-PDEYSPGTVLEEVKLVKEDDVV-G--------NATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 61 ~~~~~~~~-~~~I~~~d~-~~g~~~~~v~~~~~~~~~~~~~-~--------~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
+.+|+... ++.|+.+|. .+|+. + |....... . ....+++++ ++++|+...| ..
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~----~----W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~d------g~ 126 (571)
T 2ad6_A 63 DMMYVHSAFPNNTYALNLNDPGKI----V----WQHKPKQDASTKAVMCCDVVDRGLAYG--AGQIVKKQAN------GH 126 (571)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSE----E----EEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECTT------SE
T ss_pred CEEEEEeCCCCEEEEEeCCCCccE----E----EEEcCCCCccccccccccccccccEEE--CCEEEEEeCC------CE
Confidence 45556644 789999997 67761 1 32221110 0 012467776 6899995332 35
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCC-----CCeEEEEccC-CcEEEE
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV-----SSKIWKVGVE-GQLLSI 189 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~-----~~~I~~~d~~-g~~~~~ 189 (335)
|+.+|.++|++++..................+. +|.+|+.... .+.|+.+|++ |+.+..
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 999999999998776653211100111122232 5789998653 6899999986 666543
No 294
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.55 E-value=0.014 Score=58.36 Aligned_cols=78 Identities=10% Similarity=-0.003 Sum_probs=47.3
Q ss_pred CeEEEEccC-CcEEEEecCCccccccccccccccCeEEEccC-CeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCC
Q 039428 175 SKIWKVGVE-GQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPD-GFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLS 252 (335)
Q Consensus 175 ~~I~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~d-g~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~ 252 (335)
+.|..+|+. |+.+.....+ ...++-.+... |.+|++ +.++.|+.+|.++++ .+..+.+.... ..
T Consensus 455 g~l~A~D~~tG~~~W~~~~~-----------~~~~~g~~~tagglvf~g-t~dg~l~a~D~~tG~-~lw~~~~~~~~-~~ 520 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYV-----------TIFNGGTLSTAGNLVFEG-SADGRVIAYAADTGE-KLWEQPAASGV-MA 520 (689)
T ss_dssp EEEEEEETTTTEEEEEEEES-----------SSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCC-EEEEEECSSCC-CS
T ss_pred eeEEEEECCCCCeEeEccCC-----------CCccCccceECCCEEEEE-CCCCcEEEEECCCCc-cceeeeCCCCc-cc
Confidence 668888886 4433221110 11223244444 467766 678999999999875 55566654322 33
Q ss_pred CCCeEEEcCCCcEEEE
Q 039428 253 LGDGLALLSPTKLVVA 268 (335)
Q Consensus 253 ~pdGia~d~~g~l~va 268 (335)
.| |++..+|+.||+
T Consensus 521 ~p--~ty~~~G~qyv~ 534 (689)
T 1yiq_A 521 AP--VTYSVDGEQYVT 534 (689)
T ss_dssp CC--EEEEETTEEEEE
T ss_pred Cc--eEEEECCEEEEE
Confidence 45 777778998888
No 295
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.47 E-value=0.039 Score=51.25 Aligned_cols=187 Identities=13% Similarity=0.148 Sum_probs=109.0
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceE
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSAL 130 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v 130 (335)
..++++ +++.++++..++.|..||..+++ .+. .+.... .....++++ ++.++.+..| +.|
T Consensus 176 v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~----~~~---~~~~h~---~~v~~l~~~--~~~l~s~s~d------g~i 235 (435)
T 1p22_A 176 VLCLQY--DERVIITGSSDSTVRVWDVNTGE----MLN---TLIHHC---EAVLHLRFN--NGMMVTCSKD------RSI 235 (435)
T ss_dssp EEEEEC--CSSEEEEEETTSCEEEEESSSCC----EEE---EECCCC---SCEEEEECC--TTEEEEEETT------SCE
T ss_pred EEEEEE--CCCEEEEEcCCCeEEEEECCCCc----EEE---EEcCCC---CcEEEEEEc--CCEEEEeeCC------CcE
Confidence 355565 67777777889999999965454 121 221111 245677775 3555554332 359
Q ss_pred EEEECCCCeEEE-EeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC-cEEEEecCCccccccccccccccC
Q 039428 131 AAYDLSTWKRLF-LTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG-QLLSIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 131 ~~~d~~~~~~~~-~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~~~~~~~~~~~~p~ 208 (335)
..||.++++... ...... . ....+.+++ +|+..++.+..+.|..+|... +....+.. ......
T Consensus 236 ~vwd~~~~~~~~~~~~~~~--~-~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~----------~~~~v~ 300 (435)
T 1p22_A 236 AVWDMASPTDITLRRVLVG--H-RAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNG----------HKRGIA 300 (435)
T ss_dssp EEEECSSSSCCEEEEEECC--C-SSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEEC----------CSSCEE
T ss_pred EEEeCCCCCCceeeeEecC--C-CCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcC----------CCCcEE
Confidence 999998764321 111111 1 234455666 677777777889999999764 33332221 011244
Q ss_pred eEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEEcC
Q 039428 209 GIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVESS 281 (335)
Q Consensus 209 Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~~~ 281 (335)
.+++ ++.++++-..++.|..+|...++ ....+.... .....+++ ++..+++....+.+++.+..
T Consensus 301 ~~~~--~~~~l~~g~~dg~i~iwd~~~~~-~~~~~~~h~----~~v~~~~~--~~~~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 301 CLQY--RDRLVVSGSSDNTIRLWDIECGA-CLRVLEGHE----ELVRCIRF--DNKRIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp EEEE--ETTEEEEEETTSCEEEEETTTCC-EEEEECCCS----SCEEEEEC--CSSEEEEEETTSCEEEEEHH
T ss_pred EEEe--CCCEEEEEeCCCeEEEEECCCCC-EEEEEeCCc----CcEEEEEe--cCCEEEEEeCCCcEEEEECC
Confidence 5555 45566666678899999998764 444444221 22456666 45656664444678887753
No 296
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.46 E-value=0.0093 Score=61.61 Aligned_cols=168 Identities=14% Similarity=0.085 Sum_probs=105.2
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccce
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSA 129 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~ 129 (335)
.-..++|++ |++++....+++|..||..+++ .+. .+..+ .....++++++...|+++..| +.
T Consensus 60 ~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~----~~~---~~~~~----~~V~~v~~sp~g~~l~sgs~d------g~ 121 (902)
T 2oaj_A 60 AIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK----VLT---TVFVP----GKITSIDTDASLDWMLIGLQN------GS 121 (902)
T ss_dssp CEEEEEEET-TTEEEEEETTCEEEEEETTTCS----EEE---EEECS----SCEEEEECCTTCSEEEEEETT------SC
T ss_pred CEEEEEEcC-CCEEEEEECcCeEEEEECCCCc----EEE---EEcCC----CCEEEEEECCCCCEEEEEcCC------Cc
Confidence 357899999 7755555788999999965444 122 22222 256789999855555554322 35
Q ss_pred EEEEECCCCeEE-EEee-c----CCCccCCCCCCceeECCC-CcEEEEeCCCCeEEEEccCCcE-EEEecCCccc-cccc
Q 039428 130 LAAYDLSTWKRL-FLTQ-L----SGKSEEKSTADDIAVDAE-GNAYVTDVVSSKIWKVGVEGQL-LSIIRSPLFT-AKEW 200 (335)
Q Consensus 130 v~~~d~~~~~~~-~~~~-~----~~~~~~~~~p~~~~vd~~-G~lyV~d~~~~~I~~~d~~g~~-~~~~~~~~~~-~~~~ 200 (335)
|..||.++++.. +... . ..........+.++++|+ ++.+++.+..+.| .+|..... ...+...... .+..
T Consensus 122 V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~ 200 (902)
T 2oaj_A 122 MIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGG 200 (902)
T ss_dssp EEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCS
T ss_pred EEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCc
Confidence 999999988754 2210 0 001111356788999996 4666677778889 99987543 3333211000 0000
Q ss_pred -------cccccccCeEEEccCCeEEEEECCCCEEEEEeCCCC
Q 039428 201 -------YKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKE 236 (335)
Q Consensus 201 -------~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~ 236 (335)
.......+.++|+|||..+++-..++.|..+|...+
T Consensus 201 ~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 201 DFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp TTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTC
T ss_pred ccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 000123789999999988888888999999999876
No 297
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.45 E-value=0.013 Score=58.84 Aligned_cols=199 Identities=14% Similarity=0.049 Sum_probs=106.0
Q ss_pred eeeeEEcCCCCEEEEE-ecCC----eEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCC-
Q 039428 51 CETAKWDDVGRRFLVS-FLDG----GVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLG- 124 (335)
Q Consensus 51 pegia~d~~g~~~~~~-~~~~----~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~- 124 (335)
-.+++|+|+|+.+..+ ...| .|+++|..+++ .+.. .+ ++. ...+++++++ ..|+.+..|...
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~----~~~~--~~--~~~---~~~~~~wspD-~~l~~~~~~~~~~ 232 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK----PLAD--EL--KWV---KFSGLAWLGN-DALLYSRFAEPKE 232 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC----EEEE--EE--EEE---ESCCCEESTT-SEEEEEECCCC--
T ss_pred EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC----CCCc--cC--CCc---eeccEEEECC-CEEEEEEecCccc
Confidence 4578999999977666 3333 59999975554 1111 11 110 1247788886 777776443321
Q ss_pred -------CccceEEEEECCCCeE--EEEeecCCCccCCCCCCceeECCCCc-EEEEeC----CCCeEEEEccCCc----E
Q 039428 125 -------NKYSALAAYDLSTWKR--LFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDV----VSSKIWKVGVEGQ----L 186 (335)
Q Consensus 125 -------~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~----~~~~I~~~d~~g~----~ 186 (335)
.....|++++..+++. ...... +.. .....++.+++||+ ++++.. ....|+.+|.++. .
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~--~~~-~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 309 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTPQSADQPVFAT--PEL-PKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV 309 (741)
T ss_dssp ------CCCCCEEEEEETTSCGGGCEEEECC--TTC-TTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC
T ss_pred ccccccCCCCCEEEEEECCCCchhCEEEecc--CCC-CeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc
Confidence 0024699999876641 111221 111 12345788999996 444332 3568999998654 2
Q ss_pred EEEecCCccccccccccccccCeEEEccCC-eEEEEECC---CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCC
Q 039428 187 LSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMC---SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSP 262 (335)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~---~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~ 262 (335)
..+... . ...... ++++| .||+.... +.+|+++|+++.....+.+- .... ....+++++ +
T Consensus 310 ~~l~~~--~---------~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~--~~l~~~~~~-~ 373 (741)
T 1yr2_A 310 TALIPD--L---------KAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESK--DNLESVGIA-G 373 (741)
T ss_dssp EEEECS--S---------SSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCS--SEEEEEEEE-B
T ss_pred EEecCC--C---------CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCC--CeEEEEEEE-C
Confidence 222111 0 011222 35777 77765432 56899999987310233332 1211 123466766 4
Q ss_pred CcEEEEec--CCCeEEEEEc
Q 039428 263 TKLVVAGN--PYPSARLVES 280 (335)
Q Consensus 263 g~l~va~~--~~~~~~v~~~ 280 (335)
+.++++.. +...+++++.
T Consensus 374 ~~lv~~~~~dg~~~l~~~~~ 393 (741)
T 1yr2_A 374 NRLFASYIHDAKSQVLAFDL 393 (741)
T ss_dssp TEEEEEEEETTEEEEEEEET
T ss_pred CEEEEEEEECCEEEEEEEeC
Confidence 56666632 2234555554
No 298
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.44 E-value=0.0098 Score=59.35 Aligned_cols=201 Identities=9% Similarity=0.023 Sum_probs=106.5
Q ss_pred eeeeEEcCCCCEEEEE-ecC----CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCC-
Q 039428 51 CETAKWDDVGRRFLVS-FLD----GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLG- 124 (335)
Q Consensus 51 pegia~d~~g~~~~~~-~~~----~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~- 124 (335)
-.+++|+|+|+.+..+ ..+ ..|+++|..+++ .............++++++++..|+.+..|..+
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~----------~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGE----------WSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPS 192 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCC----------BCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTT
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCC----------CcCCcccCcccccceEEecCCCEEEEEEecCCCC
Confidence 4688999999977766 333 479999975554 110001111112578898854455554333221
Q ss_pred ------CccceEEEEECCCCeE--EEEeecCCCccCCCCCCceeECCCCc-EEEEeC---CCCeEEEEccCC-cEEEEec
Q 039428 125 ------NKYSALAAYDLSTWKR--LFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDV---VSSKIWKVGVEG-QLLSIIR 191 (335)
Q Consensus 125 ------~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~---~~~~I~~~d~~g-~~~~~~~ 191 (335)
.....|++++..+++. ....... .. .....++.+++||+ ++++.. .+..|+.++..+ +...+..
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~--~~-~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~ 269 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERT--GD-PTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK 269 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCC--CC-TTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecC--CC-CEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeec
Confidence 1124699999987651 1112221 11 23445789999996 444322 245889887643 3333221
Q ss_pred CCccccccccccccccCeEEEccCCeEEEEEC---CCCEEEEEeCCCCce-e-EEEEeccCCcCCCCCCeEEEcCCCcEE
Q 039428 192 SPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHM---CSGNLFKIDIRKEEE-E-VKLIELRGGSSLSLGDGLALLSPTKLV 266 (335)
Q Consensus 192 ~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~---~~~~v~~~d~~~~~~-~-~~~~~~~g~~~~~~pdGia~d~~g~l~ 266 (335)
.. ........ ++|.+|+... .+.+|+++|+++++. . ..++....+ ....++++. ++.++
T Consensus 270 ~~-----------~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~~l~~~~~~-~~~lv 333 (695)
T 2bkl_A 270 GV-----------GAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSS---ASLLSVSIV-GGHLS 333 (695)
T ss_dssp CS-----------SCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSS---CEEEEEEEE-TTEEE
T ss_pred CC-----------CceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCC---CeEEEEEEE-CCEEE
Confidence 10 11223333 5665666543 368999999977520 1 333331111 123567777 56777
Q ss_pred EEec--CCCeEEEEEc
Q 039428 267 VAGN--PYPSARLVES 280 (335)
Q Consensus 267 va~~--~~~~~~v~~~ 280 (335)
++.. +...+++++.
T Consensus 334 ~~~~~dg~~~l~~~~~ 349 (695)
T 2bkl_A 334 LEYLKDATSEVRVATL 349 (695)
T ss_dssp EEEEETTEEEEEEEET
T ss_pred EEEEECCEEEEEEEeC
Confidence 7633 2234555554
No 299
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.41 E-value=0.021 Score=56.90 Aligned_cols=78 Identities=10% Similarity=0.040 Sum_probs=46.3
Q ss_pred CeEEEEccCC-cEEEEecCCccccccccccccccCeEEEcc-CCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCC
Q 039428 175 SKIWKVGVEG-QLLSIIRSPLFTAKEWYKNVFGLNGIVYHP-DGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLS 252 (335)
Q Consensus 175 ~~I~~~d~~g-~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~-dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~ 252 (335)
+.|+.+|+.. +.+..... .....+.++.. +|.+|++ +.++.|+.+|.+.++ .+..+.... ....
T Consensus 438 g~l~A~D~~tG~~~W~~~~-----------~~~~~~~~~~t~gg~vf~g-~~dg~l~a~d~~tG~-~l~~~~~~~-~~~~ 503 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPY-----------PTHWNGGTLSTAGNLVFQG-TAAGQMHAYSADKGE-ALWQFEAQS-GIVA 503 (668)
T ss_dssp EEEEEEETTTTEEEEEEEE-----------SSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCC-EEEEEECSS-CCCS
T ss_pred ceEEEEeCCCCcEEEEccC-----------CCCCcCceeEeCCCEEEEE-CCcccchhhhhhcCh-hheEecCCC-Cccc
Confidence 6788898764 43321110 01123333333 5578887 578999999998875 555565533 2123
Q ss_pred CCCeEEEcCCCcEEEE
Q 039428 253 LGDGLALLSPTKLVVA 268 (335)
Q Consensus 253 ~pdGia~d~~g~l~va 268 (335)
.| +++..+|++||+
T Consensus 504 ~p--~~~~~~G~~yva 517 (668)
T 1kv9_A 504 AP--MTFELAGRQYVA 517 (668)
T ss_dssp CC--EEEEETTEEEEE
T ss_pred Cc--eEEEECCEEEEE
Confidence 34 555567898888
No 300
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.37 E-value=0.032 Score=50.98 Aligned_cols=156 Identities=9% Similarity=-0.009 Sum_probs=86.4
Q ss_pred eEEEeC--CCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEe-----------
Q 039428 105 GIAVDR--PRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTD----------- 171 (335)
Q Consensus 105 Gi~~d~--~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d----------- 171 (335)
.+++.+ .++.+++...+ + ..|..||+++++.+...... .........+++.|+|.+.++.
T Consensus 183 ~l~fs~~~g~~~~LaSgS~---D--~TIkIWDl~TGk~l~tL~g~--~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laS 255 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTI---M--NNIVIWNLKTGQLLKKMHID--DSYQASVCHKAYSEMGLLFIVLSHPCAKESESL 255 (356)
T ss_dssp EEEEEEEETSTTEEEEEET---T--SEEEEEETTTCCEEEEEECC--C---CCCEEEEEEETTEEEEEEC----------
T ss_pred eEEeeccCCCCceEEEecC---C--CcEEEEECCCCcEEEEEcCC--CcceeeeEEEEECCCCCEEEEeccCCCcceeec
Confidence 444443 24566674332 1 46999999999876443321 1112234456899999876542
Q ss_pred -CCCCeEEEEccCCcEE-EEecCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCc
Q 039428 172 -VVSSKIWKVGVEGQLL-SIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGS 249 (335)
Q Consensus 172 -~~~~~I~~~d~~g~~~-~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~ 249 (335)
+..+.|..+|+++... ..+. +..|. ...-.-+..+.++.+.++-..++.|...|+..++ ....+. + .
T Consensus 256 Gs~D~tIklWd~~tgk~l~v~~---~~~p~----Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk-~l~tL~--g-H 324 (356)
T 2w18_A 256 RSPVFQLIVINPKTTLSVGVML---YCLPP----GQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQ-CTALLP--P-V 324 (356)
T ss_dssp --CCEEEEEEETTTTEEEEEEE---ECCCT----TCCCCEEEEEEETTEEEEEETTSCEEEEETTTCS-EEEEEC--C-C
T ss_pred cCCCcEEEEEECCCCEEEEEEE---eeccC----CCcceeEccccCCCEEEEEcCCCcEEEEECCCCc-EEEEec--C-C
Confidence 3345666677764432 2110 00010 0000112223335567777778899999999875 445553 2 1
Q ss_pred CCCCCC-eEEEcCCCcEEEEecCCCeEEEEE
Q 039428 250 SLSLGD-GLALLSPTKLVVAGNPYPSARLVE 279 (335)
Q Consensus 250 ~~~~pd-Gia~d~~g~l~va~~~~~~~~v~~ 279 (335)
...+. -+++.|+|.+.++....+.+++.+
T Consensus 325 -~~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 325 -SDQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp ---CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred -CCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 11233 489999999888866557787765
No 301
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.37 E-value=0.023 Score=56.36 Aligned_cols=239 Identities=9% Similarity=-0.024 Sum_probs=119.5
Q ss_pred eeEEcCCCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCC-CCcceEEEeCCCCeEEEEEe-cCCCCccce
Q 039428 53 TAKWDDVGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVG-NATMGIAVDRPRNRLLVAFT-DVLGNKYSA 129 (335)
Q Consensus 53 gia~d~~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~-~~p~Gi~~d~~~g~l~v~~~-D~~~~~~~~ 129 (335)
+.++..+|.+|++. .....++++|+.+.+ |...+.+.. +.-++.++-+ +|+|||... .........
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~----------W~~~~~~~~~R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~ 315 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDS----------WIPGPDMQVARGYQSSATMS-DGRVFTIGGSWSGGVFEKN 315 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTE----------EEECCCCSSCCSSCEEEECT-TSCEEEECCCCCSSSCCCC
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCc----------eeECCCCCccccccceEEec-CCeEEEEeCcccCCccccc
Confidence 46777889988888 456689999964332 433333221 2335666654 789999643 111111246
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCC---------CCeEEEEccCCcEEE-EecCCcccccc
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV---------SSKIWKVGVEGQLLS-IIRSPLFTAKE 199 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~---------~~~I~~~d~~g~~~~-~~~~~~~~~~~ 199 (335)
+.+||+++++-...............- ..++..++.+|+.... ...+.++|+...... ..+...... .
T Consensus 316 ~e~yd~~t~~W~~~~~~~~~p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~-~ 393 (656)
T 1k3i_A 316 GEVYSPSSKTWTSLPNAKVNPMLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNR-G 393 (656)
T ss_dssp EEEEETTTTEEEEETTSCSGGGCCCCT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETT-E
T ss_pred ceEeCCCCCcceeCCCccccccccccc-cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccccc-c
Confidence 999999987654321110000000111 1223345667776533 345677777643211 111000000 0
Q ss_pred ccccccccCeEEEc-cCCeEEEEECCC--------C---EEEEEeCCCCceeEEEEeccCCcCCCCC---CeEEEcCCCc
Q 039428 200 WYKNVFGLNGIVYH-PDGFLIVIHMCS--------G---NLFKIDIRKEEEEVKLIELRGGSSLSLG---DGLALLSPTK 264 (335)
Q Consensus 200 ~~~~~~~p~Gia~~-~dg~Lyvad~~~--------~---~v~~~d~~~~~~~~~~~~~~g~~~~~~p---dGia~d~~g~ 264 (335)
..+.......+.++ .++.||+.-... . .|.++|+... ....+.. + . +..+ ..+++-++|+
T Consensus 394 ~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~-~-~-mp~~R~~~~~~~l~~g~ 468 (656)
T 1k3i_A 394 VAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS--PNTVFAS-N-G-LYFARTFHTSVVLPDGS 468 (656)
T ss_dssp ECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC--CEEEECT-T-C-CSSCCBSCEEEECTTSC
T ss_pred cCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC--CeeEEcc-C-C-CCCCcccCCeEECCCCC
Confidence 00000111223333 367999875421 2 6778888776 4444421 1 1 2222 3456667899
Q ss_pred EEEEecC-----------CCeEEEEEcCCC-cEEEEEeeeecCCCCCcceEEEEe--CCeEEEE
Q 039428 265 LVVAGNP-----------YPSARLVESSDG-WETASVVAKFNGPTHRVATAATVK--DGRVYLS 314 (335)
Q Consensus 265 l~va~~~-----------~~~~~v~~~~~~-~~~~~~~~~~~~p~~~~Pt~va~~--~g~lyV~ 314 (335)
+||.+.. .+.+.+++...+ |.. ......|... +++++- +|+|||.
T Consensus 469 i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~---~~~~~~~R~~--hs~a~ll~dg~v~v~ 527 (656)
T 1k3i_A 469 TFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK---QNPNSIVRVY--HSISLLLPDGRVFNG 527 (656)
T ss_dssp EEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE---CCCCSSCCCT--TEEEEECTTSCEEEE
T ss_pred EEEECCcccCcCcCCCCcccceEEEcCCCCceee---cCCCCCcccc--ccHhhcCCCcEEEec
Confidence 9999531 134667776544 543 2323233332 345543 8999984
No 302
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.36 E-value=0.036 Score=50.65 Aligned_cols=160 Identities=10% Similarity=0.009 Sum_probs=90.0
Q ss_pred eeEEcC---CCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecC-------
Q 039428 53 TAKWDD---VGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDV------- 122 (335)
Q Consensus 53 gia~d~---~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~------- 122 (335)
.+++.+ ++.+++.+..+++|..||..+++. +. .+......-.....++++| +|.+.++....
T Consensus 183 ~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~----l~---tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~la 254 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQL----LK---KMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESES 254 (356)
T ss_dssp EEEEEEEETSTTEEEEEETTSEEEEEETTTCCE----EE---EEECCC---CCCEEEEEEE-TTEEEEEEC---------
T ss_pred eEEeeccCCCCceEEEecCCCcEEEEECCCCcE----EE---EEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceee
Confidence 345555 556666668899999999766651 22 2222111002345668887 67666532210
Q ss_pred CCCccceEEEEECCCCeEEEEeecC-CCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC-cEEEEecCCccccccc
Q 039428 123 LGNKYSALAAYDLSTWKRLFLTQLS-GKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG-QLLSIIRSPLFTAKEW 200 (335)
Q Consensus 123 ~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~~~~~~ 200 (335)
.+.....|..+|+.+++........ +.+. .... +..+.+|.+.++.+..+.|..+|... +....+..
T Consensus 255 SGs~D~tIklWd~~tgk~l~v~~~~~p~Gh-~~~~--lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~g-------- 323 (356)
T 2w18_A 255 LRSPVFQLIVINPKTTLSVGVMLYCLPPGQ-AGRF--LEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPP-------- 323 (356)
T ss_dssp ---CCEEEEEEETTTTEEEEEEEECCCTTC-CCCE--EEEEEETTEEEEEETTSCEEEEETTTCSEEEEECC--------
T ss_pred ccCCCcEEEEEECCCCEEEEEEEeeccCCC-ccee--EccccCCCEEEEEcCCCcEEEEECCCCcEEEEecC--------
Confidence 0111146888999998765322211 1111 1111 22233366778877888999999874 44443321
Q ss_pred cccccccC-eEEEccCCeEEEEECCCCEEEEEeC
Q 039428 201 YKNVFGLN-GIVYHPDGFLIVIHMCSGNLFKIDI 233 (335)
Q Consensus 201 ~~~~~~p~-Gia~~~dg~Lyvad~~~~~v~~~d~ 233 (335)
....+. .++|+|||.++++-+.+++|...|.
T Consensus 324 --H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 324 --VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp --C--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred --CCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 011233 5899999977778788888877664
No 303
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.34 E-value=0.0016 Score=63.78 Aligned_cols=109 Identities=15% Similarity=0.213 Sum_probs=70.9
Q ss_pred ccccCeEEEcc-CCeEEEEECC---------------------CCEEEEEeCCCCc----e-eEEEEeccC---------
Q 039428 204 VFGLNGIVYHP-DGFLIVIHMC---------------------SGNLFKIDIRKEE----E-EVKLIELRG--------- 247 (335)
Q Consensus 204 ~~~p~Gia~~~-dg~Lyvad~~---------------------~~~v~~~d~~~~~----~-~~~~~~~~g--------- 247 (335)
+..|.+++++| +|.+|++-+. .|+|+|++++... . ....+...+
T Consensus 383 f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~ 462 (592)
T 3zwu_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred EeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccccc
Confidence 45689999998 6799998764 2689999876531 0 122222111
Q ss_pred ---------CcCCCCCCeEEEcCCCcEEEEecCC------------CeEEEEEcCCCcEEEEEeeeecCCCCCcceEEEE
Q 039428 248 ---------GSSLSLGDGLALLSPTKLVVAGNPY------------PSARLVESSDGWETASVVAKFNGPTHRVATAATV 306 (335)
Q Consensus 248 ---------~~~~~~pdGia~d~~g~l~va~~~~------------~~~~v~~~~~~~~~~~~~~~~~~p~~~~Pt~va~ 306 (335)
...+..||+|++|+.|+|||+..++ |.+++.....+ ++..-+..|...-.|+++|
T Consensus 463 ~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g----~~~rf~~~P~gaE~TG~~f 538 (592)
T 3zwu_A 463 KGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG----EIRRFMVGPIGCEVTGISF 538 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTC----CEEEEEECCTTCEEEEEEE
T ss_pred cccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCC----eEEEEEeCCCCccCcCeeE
Confidence 1126789999999999999994321 34555544333 2333344676667789999
Q ss_pred e--CCeEEEEec
Q 039428 307 K--DGRVYLSHL 316 (335)
Q Consensus 307 ~--~g~lyV~~~ 316 (335)
. +.+|||+-+
T Consensus 539 spDg~tlfvniQ 550 (592)
T 3zwu_A 539 SPDQKTLFVGIQ 550 (592)
T ss_dssp CTTSSEEEEEEE
T ss_pred CCCCCEEEEEEE
Confidence 4 678999755
No 304
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.34 E-value=0.073 Score=52.33 Aligned_cols=120 Identities=11% Similarity=-0.001 Sum_probs=68.6
Q ss_pred eeEEcCCCCEEEEEec-CCeEEEEEC-CCCCCCcceeeeeEEeecCCcCC---------CCcceEEEeCCCCe----EEE
Q 039428 53 TAKWDDVGRRFLVSFL-DGGVGQVLV-PDEYSPGTVLEEVKLVKEDDVVG---------NATMGIAVDRPRNR----LLV 117 (335)
Q Consensus 53 gia~d~~g~~~~~~~~-~~~I~~~d~-~~g~~~~~v~~~~~~~~~~~~~~---------~~p~Gi~~d~~~g~----l~v 117 (335)
.+++. ++.+|+... ++.|+.+|. .+|+. + |........ ....|+++.+.+++ ||+
T Consensus 57 tP~v~--~g~vyv~~~~~~~v~AlD~~~tG~~----l----W~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v 126 (599)
T 1w6s_A 57 APLVV--DGKMYIHTSFPNNTFALGLDDPGTI----L----WQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILK 126 (599)
T ss_dssp CCEEE--TTEEEEECSTTTCEEEEETTCTTSE----E----EEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEE
T ss_pred ccEEE--CCEEEEEeCCCCEEEEEeCCCCCcE----E----EEECCCCCccccccccccccccceEEEecCCcceeEEEE
Confidence 34444 345556644 789999997 67761 1 322221100 11357788432566 999
Q ss_pred EEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeC-----CCCeEEEEccC-CcEEEE
Q 039428 118 AFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDV-----VSSKIWKVGVE-GQLLSI 189 (335)
Q Consensus 118 ~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~-----~~~~I~~~d~~-g~~~~~ 189 (335)
...| ..|+.+|.++|++++..................+. +|.+||... ..+.|+.+|.+ |+.+..
T Consensus 127 ~t~d------g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 127 TQLD------GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp ECTT------SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred EcCC------CEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence 5332 35999999999998776653211100111112222 578888654 36899999986 665543
No 305
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.32 E-value=0.0028 Score=62.12 Aligned_cols=113 Identities=15% Similarity=0.211 Sum_probs=73.0
Q ss_pred CCcceEEEeCCCCeEEEEEecCCC----------------CccceEEEEECCCCe-----EE---EEeecCC--------
Q 039428 101 NATMGIAVDRPRNRLLVAFTDVLG----------------NKYSALAAYDLSTWK-----RL---FLTQLSG-------- 148 (335)
Q Consensus 101 ~~p~Gi~~d~~~g~l~v~~~D~~~----------------~~~~~v~~~d~~~~~-----~~---~~~~~~~-------- 148 (335)
.+|.++.+++.++.+|++..+... ++..+|++|+++.+. .. +......
T Consensus 384 ~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~~ 463 (592)
T 3zwu_A 384 DRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPK 463 (592)
T ss_dssp ECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGG
T ss_pred eccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccccc
Confidence 468999999888999998653221 123579999865331 11 1211110
Q ss_pred -------CccCCCCCCceeECCCCcEEEEe-C-----------CCCeEEEEccC-CcEEEEecCCccccccccccccccC
Q 039428 149 -------KSEEKSTADDIAVDAEGNAYVTD-V-----------VSSKIWKVGVE-GQLLSIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 149 -------~~~~~~~p~~~~vd~~G~lyV~d-~-----------~~~~I~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~p~ 208 (335)
....+..|..|+||++|+|||+. . .++.++..+++ |+..+++..+ ...-..
T Consensus 464 ~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P---------~gaE~T 534 (592)
T 3zwu_A 464 GGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP---------IGCEVT 534 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC---------TTCEEE
T ss_pred ccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCC---------CCccCc
Confidence 01126789999999999999973 2 24678888887 4444433221 123478
Q ss_pred eEEEccCC-eEEEEE
Q 039428 209 GIVYHPDG-FLIVIH 222 (335)
Q Consensus 209 Gia~~~dg-~Lyvad 222 (335)
|++|+||+ +|||+-
T Consensus 535 G~~fspDg~tlfvni 549 (592)
T 3zwu_A 535 GISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred CeeECCCCCEEEEEE
Confidence 99999999 888763
No 306
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.28 E-value=0.0054 Score=61.12 Aligned_cols=155 Identities=12% Similarity=0.109 Sum_probs=84.1
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCC----Cc
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLG----NK 126 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~----~~ 126 (335)
+.+++|.++|+ ++....++.|+.+|..+++ .. .+.............++++|++..|..+. +..+ ..
T Consensus 18 ~~~~~~s~dg~-~~~~~~d~~i~~~~~~~g~-----~~--~~~~~~~~~~~~~~~~~~SpDg~~la~~~-~~~~~~~~s~ 88 (719)
T 1z68_A 18 TFFPNWISGQE-YLHQSADNNIVLYNIETGQ-----SY--TILSNRTMKSVNASNYGLSPDRQFVYLES-DYSKLWRYSY 88 (719)
T ss_dssp CCCCEESSSSE-EEEECTTSCEEEEESSSCC-----EE--EEECHHHHHTTTCSEEEECTTSSEEEEEE-EEEECSSSCE
T ss_pred CCccEECCCCe-EEEEcCCCCEEEEEcCCCc-----EE--EEEccccccccceeeEEECCCCCeEEEEe-cCceeEEeec
Confidence 44889999995 4444457899999965444 11 23322111001256899998444454432 2110 00
Q ss_pred cceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCCCCeEEEEccCCcEEEEec-CCccc----c-cc
Q 039428 127 YSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEGQLLSIIR-SPLFT----A-KE 199 (335)
Q Consensus 127 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g~~~~~~~-~~~~~----~-~~ 199 (335)
...|+++|.++++......+ ......+++.|||+ +.++ ..+.|+.++.++.....+. .+... . +.
T Consensus 89 ~~~i~~~d~~~g~~~~~~~l------~~~~~~~~~SPDG~~la~~--~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~ 160 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNEL------PRPIQYLCWSPVGSKLAYV--YQNNIYLKQRPGDPPFQITFNGRENKIFNGIPD 160 (719)
T ss_dssp EEEEEEEETTTTEECCSSCC------CSSBCCEEECSSTTCEEEE--ETTEEEEESSTTSCCEECCCCCBTTTEEESSCC
T ss_pred ceEEEEEECCCCccccceec------CcccccceECCCCCEEEEE--ECCeEEEEeCCCCCcEEEecCCCcCCeEccccc
Confidence 14699999998876210112 13456799999996 4443 2468999998754433221 10000 0 00
Q ss_pred c---cccccccCeEEEccCC-eEEEEE
Q 039428 200 W---YKNVFGLNGIVYHPDG-FLIVIH 222 (335)
Q Consensus 200 ~---~~~~~~p~Gia~~~dg-~Lyvad 222 (335)
. ........+++++||| .|+++.
T Consensus 161 ~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 161 WVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp HHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred ceeeeecccCcccEEECCCCCEEEEEE
Confidence 0 0001123689999999 666544
No 307
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.22 E-value=0.032 Score=55.61 Aligned_cols=202 Identities=12% Similarity=0.099 Sum_probs=104.9
Q ss_pred eeeEEcCCCCEEEEEecC-------------CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEE
Q 039428 52 ETAKWDDVGRRFLVSFLD-------------GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVA 118 (335)
Q Consensus 52 egia~d~~g~~~~~~~~~-------------~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~ 118 (335)
.+++|+++|+.++.+..+ ..|++++..++.. +...+...+... ....++.+++++..|++.
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~-----~~~lv~~~~~~~-~~~~~~~~SpDG~~l~~~ 244 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS-----KDTVVHERTGDP-TTFLQSDLSRDGKYLFVY 244 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG-----GCEEEECCCCCT-TCEEEEEECTTSCCEEEE
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCch-----hceEEEecCCCC-EEEEEEEECCCCCEEEEE
Confidence 579999999877766332 2499998643331 111122222110 234688899855556554
Q ss_pred EecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeC---CCCeEEEEccCCcE----EEEec
Q 039428 119 FTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDV---VSSKIWKVGVEGQL----LSIIR 191 (335)
Q Consensus 119 ~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~---~~~~I~~~d~~g~~----~~~~~ 191 (335)
..+... ...|+.+|..+++....... ......... ++|.+|+... .+.+|++++.++.. ..++.
T Consensus 245 ~~~~~~--~~~l~~~~~~~~~~~~l~~~------~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 315 (695)
T 2bkl_A 245 ILRGWS--ENDVYWKRPGEKDFRLLVKG------VGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVP 315 (695)
T ss_dssp EEETTT--EEEEEEECTTCSSCEEEEEC------SSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEEC
T ss_pred EeCCCC--ceEEEEEcCCCCceEEeecC------CCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEec
Confidence 333211 14688888766654432221 111112222 4555777543 46899999986432 22221
Q ss_pred CCccccccccccccccCeEEEccCCeEEEEECCC--CEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCC-cEEEE
Q 039428 192 SPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCS--GNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPT-KLVVA 268 (335)
Q Consensus 192 ~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~--~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g-~l~va 268 (335)
. . ......+++++ ++.|+++...+ .+|+.+++++. ..+.+...+ .....++++.+++ .++++
T Consensus 316 ~----~-----~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~--~~~~l~~~~---~~~v~~~~~s~d~~~l~~~ 380 (695)
T 2bkl_A 316 E----D-----SSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGK--PVRTVQLPG---VGAASNLMGLEDLDDAYYV 380 (695)
T ss_dssp C----C-----SSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC--EEEECCCSS---SSEECCCBSCTTCSEEEEE
T ss_pred C----C-----CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC--eeEEecCCC---CeEEEEeecCCCCCEEEEE
Confidence 1 0 01124677887 67777765544 47888888665 444444322 1123455566666 45544
Q ss_pred -ecCC--CeEEEEEcCCC
Q 039428 269 -GNPY--PSARLVESSDG 283 (335)
Q Consensus 269 -~~~~--~~~~v~~~~~~ 283 (335)
.... ..+.+++...+
T Consensus 381 ~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 381 FTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp EEETTEEEEEEEEETTTC
T ss_pred EcCCCCCCEEEEEECCCC
Confidence 2211 23555555443
No 308
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.21 E-value=0.03 Score=54.51 Aligned_cols=157 Identities=8% Similarity=0.134 Sum_probs=94.3
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCc-ceeeeeEEee--cCCcCCCCcceEEEeCCCCeEEEEEecCCCCcc
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPG-TVLEEVKLVK--EDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKY 127 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~-~v~~~~~~~~--~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~ 127 (335)
-.+++|+|+|+.++++..+++|..||..++.... +.+. ...+. ..+. ..+...+++.| +| +.++..|
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~-l~ti~~~~~gh-~~~V~sVawSP-dg-Laass~D------ 201 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYF-ESSIRLSDAGS-KDWVTHIVWYE-DV-LVAALSN------ 201 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEE-EEEEECSCTTC-CCCEEEEEEET-TE-EEEEETT------
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccccee-eeeeecccccc-cccEEEEEEcC-Cc-EEEEeCC------
Confidence 5789999999999999889999999965442100 0000 01111 1111 14678999997 66 5443332
Q ss_pred ceEEEEECCCCeEE-EEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccc
Q 039428 128 SALAAYDLSTWKRL-FLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 128 ~~v~~~d~~~~~~~-~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (335)
..|..||.++++.. ....+.. +. .....++++. |+..++.. .+.|..+|.+++....+..+ ....
T Consensus 202 ~tVrlWd~~~~~~~~~~~tL~~-~h-~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~g---------h~~~ 267 (588)
T 2j04_A 202 NSVFSMTVSASSHQPVSRMIQN-AS-RRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTG---------SLEN 267 (588)
T ss_dssp CCEEEECCCSSSSCCCEEEEEC-CC-SSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECS---------CCSC
T ss_pred CeEEEEECCCCccccceeeecc-cc-cCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcC---------CCce
Confidence 35999999876621 0001100 11 2467889997 45555444 48999999887766432211 1123
Q ss_pred cCeEEE--ccCCeEEEEECCCCE-EEEE
Q 039428 207 LNGIVY--HPDGFLIVIHMCSGN-LFKI 231 (335)
Q Consensus 207 p~Gia~--~~dg~Lyvad~~~~~-v~~~ 231 (335)
..++++ +||+..+++...+|+ |+.+
T Consensus 268 V~~va~~~s~d~~~La~a~edG~klw~~ 295 (588)
T 2j04_A 268 FHIIPLNHEKESTILLMSNKTSYKVLLE 295 (588)
T ss_dssp CCEEEETTCSSCEEEEECSSCEEEEEES
T ss_pred EEEEEeeeCCCCCEEEEEcCCCCEEEee
Confidence 778999 999955555555555 6664
No 309
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.19 E-value=0.11 Score=45.85 Aligned_cols=219 Identities=11% Similarity=0.017 Sum_probs=117.8
Q ss_pred CCEEEEEe--cCCeEEEEECCCCCCCcceeeeeEEeecCCcCC-CCcceEEEeCCCCeEEEEEecCCCCccceEEEEECC
Q 039428 60 GRRFLVSF--LDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVG-NATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLS 136 (335)
Q Consensus 60 g~~~~~~~--~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~-~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~ 136 (335)
+.+|++.. ..+.++++|+.+.+ |...+.+.. ..-+.+++. ++.||+..+.. ....+.+.+||+.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~----------W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~-~~~~~~~~~~d~~ 78 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYS----------WTDIRCPFEKRRDAACVFW--DNVVYILGGSQ-LFPIKRMDCYNVV 78 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTE----------EEECCCCSCCCBSCEEEEE--TTEEEEECCBS-SSBCCEEEEEETT
T ss_pred ceEEEEeCCCCCceEEEecCCCCC----------EecCCCCCcccceeEEEEE--CCEEEEEeCCC-CCCcceEEEEeCC
Confidence 34555552 24789999965433 322222211 233455554 68899964322 2222579999999
Q ss_pred CCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCC------CCeEEEEccCCcEEEEecCCccccccccccccccCeE
Q 039428 137 TWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV------SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGI 210 (335)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~------~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gi 210 (335)
+++-....+.+.+ .... .+++ -++.+||.... ...++++|+....-..+.. +. ....-...
T Consensus 79 ~~~W~~~~~~p~~---r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~--~p------~~r~~~~~ 145 (306)
T 3ii7_A 79 KDSWYSKLGPPTP---RDSL-AACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPS--ML------TQRCSHGM 145 (306)
T ss_dssp TTEEEEEECCSSC---CBSC-EEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECC--CS------SCCBSCEE
T ss_pred CCeEEECCCCCcc---ccce-eEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCC--Cc------CCcceeEE
Confidence 8865544333211 1222 2222 36789997432 3679999998665443321 11 11123344
Q ss_pred EEccCCeEEEEECC---------CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecC-----CCeEE
Q 039428 211 VYHPDGFLIVIHMC---------SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNP-----YPSAR 276 (335)
Q Consensus 211 a~~~dg~Lyvad~~---------~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~-----~~~~~ 276 (335)
+.. ++.||+.-.. .+.++++|+... ..+.+...... .. -..+++. ++++|+.+.. .+.+.
T Consensus 146 ~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~-r~-~~~~~~~-~~~i~v~GG~~~~~~~~~~~ 219 (306)
T 3ii7_A 146 VEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPATE--TWTELCPMIEA-RK-NHGLVFV-KDKIFAVGGQNGLGGLDNVE 219 (306)
T ss_dssp EEE-TTEEEEECCEESCTTTCEECCCEEEEETTTT--EEEEECCCSSC-CB-SCEEEEE-TTEEEEECCEETTEEBCCEE
T ss_pred EEE-CCEEEEECCCCCCCCcccccceEEEeCCCCC--eEEECCCccch-hh-cceEEEE-CCEEEEEeCCCCCCCCceEE
Confidence 443 7788886421 467999999987 55555321101 11 2234443 6789998431 24577
Q ss_pred EEEcCCC-cEEEEEeeeecCCCCCcceEEEEeCCeEEEEe
Q 039428 277 LVESSDG-WETASVVAKFNGPTHRVATAATVKDGRVYLSH 315 (335)
Q Consensus 277 v~~~~~~-~~~~~~~~~~~~p~~~~Pt~va~~~g~lyV~~ 315 (335)
+++...+ |... ..+ |..+.-.++++-+++|||.-
T Consensus 220 ~yd~~~~~W~~~---~~~--p~~r~~~~~~~~~~~i~v~G 254 (306)
T 3ii7_A 220 YYDIKLNEWKMV---SPM--PWKGVTVKCAAVGSIVYVLA 254 (306)
T ss_dssp EEETTTTEEEEC---CCC--SCCBSCCEEEEETTEEEEEE
T ss_pred EeeCCCCcEEEC---CCC--CCCccceeEEEECCEEEEEe
Confidence 7776655 6543 222 22222234555689999843
No 310
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.17 E-value=0.036 Score=49.41 Aligned_cols=146 Identities=7% Similarity=0.094 Sum_probs=86.0
Q ss_pred ceeeeEEcCCCCEEEEE-e--------cCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEe
Q 039428 50 LCETAKWDDVGRRFLVS-F--------LDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFT 120 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~-~--------~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~ 120 (335)
...++++ +|+.++.. . ..+.|+.+|..+++ .. .+ .....++++|++..|+.+..
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~-----~~---~l-------~~~~~~~~SpDg~~la~~~~ 78 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA-----RR---FI-------ENATMPRISPDGKKIAFMRA 78 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC-----EE---EE-------ESCEEEEECTTSSEEEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc-----eE---Ec-------ccCCCeEECCCCCEEEEEEe
Confidence 3567777 66654443 1 13579999864443 11 22 13457889985445555433
Q ss_pred cCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeCC--------------------------
Q 039428 121 DVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDVV-------------------------- 173 (335)
Q Consensus 121 D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~~-------------------------- 173 (335)
+.... ...|+++|.++++....... .. ...+++.|||+ ++++...
T Consensus 79 ~~~~~-~~~l~~~~~~~g~~~~l~~~------~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 150 (347)
T 2gop_A 79 NEEKK-VSEIWVADLETLSSKKILEA------KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGE 150 (347)
T ss_dssp ETTTT-EEEEEEEETTTTEEEEEEEE------SE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------C
T ss_pred ccCCC-cceEEEEECCCCceEEEEcC------CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCc
Confidence 22111 14699999998876543332 12 56789999986 5555321
Q ss_pred CCeEEEEccCCcEE-EEecCCccccccccccccccCeEEEccCCeEEEEECC--------CCEEEEEe
Q 039428 174 SSKIWKVGVEGQLL-SIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMC--------SGNLFKID 232 (335)
Q Consensus 174 ~~~I~~~d~~g~~~-~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~--------~~~v~~~d 232 (335)
...|++++.++... +.+.. . ....++++|||.+|++... ..+|+.++
T Consensus 151 ~~~l~~~d~~~~~~~~~l~~-----------~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFEK-----------P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE-----------E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE
T ss_pred cceEEEEECCCCeEEeeecC-----------C-CcccccCCCCeEEEEEecccccccccccccEEEeC
Confidence 35799999876554 32211 0 3678899999933444332 34799998
No 311
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.05 E-value=0.011 Score=55.76 Aligned_cols=201 Identities=10% Similarity=0.050 Sum_probs=108.1
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeee-eEEeec-CC--c-CCCCcceEEEeCCCCeEEEEEecCCCC
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEE-VKLVKE-DD--V-VGNATMGIAVDRPRNRLLVAFTDVLGN 125 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~-~~~~~~-~~--~-~~~~p~Gi~~d~~~g~l~v~~~D~~~~ 125 (335)
-..+++++++.++++...++ |..++............. ...... +. . .......+++++++..|+|+......+
T Consensus 39 ~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d 117 (434)
T 2oit_A 39 SSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYG 117 (434)
T ss_dssp CBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTE
T ss_pred ccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCC
Confidence 35789999988888775444 666542100000000000 000000 00 0 012468999998444454421001112
Q ss_pred ccceEEEEECCCC--------eEEEE-eecCCCccCCCCCCceeECCC-CcEEEEeCCCCeEEEEccCCcEEEEecCCcc
Q 039428 126 KYSALAAYDLSTW--------KRLFL-TQLSGKSEEKSTADDIAVDAE-GNAYVTDVVSSKIWKVGVEGQLLSIIRSPLF 195 (335)
Q Consensus 126 ~~~~v~~~d~~~~--------~~~~~-~~~~~~~~~~~~p~~~~vd~~-G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~ 195 (335)
+.|..||.+++ +.... ..+.+ . ....+++++.|+ ++++++.+..+.|..+|......... .
T Consensus 118 --~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--h-~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~----~ 188 (434)
T 2oit_A 118 --SIIAFFDVRTFSNEAKQQKRPFAYHKLLKD--A-GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCA----T 188 (434)
T ss_dssp --EEEEEEEHHHHHCTTCSSCCCSEEEECCCS--G-GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEE----E
T ss_pred --ceEEEEEccccccCCcCCcceeeeeeccCC--C-CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceee----c
Confidence 46899997543 11111 11111 1 345788999998 78888888899999999875432210 0
Q ss_pred ccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcC---CCCCCeEEEcCCCcEEEE
Q 039428 196 TAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSS---LSLGDGLALLSPTKLVVA 268 (335)
Q Consensus 196 ~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~---~~~pdGia~d~~g~l~va 268 (335)
.. .......++++|+|..+++-..++.|..+|.++. ....+....... ......+++++++.++++
T Consensus 189 ~~-----~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 189 LP-----STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQ--EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp EC-----GGGCEEEEEECTTSSCEEEEETTSCEEEECTTCC--EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred cC-----CCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCc--ccccccCCcccCCCCceeEEEEEEecCceEEEE
Confidence 00 1224789999999955555557889999999843 444443221000 012356777777665544
No 312
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.98 E-value=0.0095 Score=57.65 Aligned_cols=157 Identities=10% Similarity=0.059 Sum_probs=98.5
Q ss_pred cceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEE--EeCCCC-eEEEEEecCCCC
Q 039428 49 FLCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIA--VDRPRN-RLLVAFTDVLGN 125 (335)
Q Consensus 49 ~~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~--~d~~~g-~l~v~~~D~~~~ 125 (335)
....+++|++++ .++++..+++|..||..++..+ .. .+.... .....|+ +.+ ++ .++++.+..
T Consensus 267 ~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~---~~---~~~~H~---~~V~sv~~~~s~-~g~~~laS~S~D--- 332 (524)
T 2j04_B 267 SLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVP---SF---YDQVHD---SYILSVSTAYSD-FEDTVVSTVAVD--- 332 (524)
T ss_dssp TCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSC---SE---EEECSS---SCEEEEEEECCT-TSCCEEEEEETT---
T ss_pred CCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCc---eE---Eeeccc---ccEEEEEEEcCC-CCCeEEEEeccC---
Confidence 345789998764 6666688999999996544321 11 122221 2456773 444 55 666643321
Q ss_pred ccceEEEEECCCCeEE--EEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCC-cEEEEecCCccccccccc
Q 039428 126 KYSALAAYDLSTWKRL--FLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEG-QLLSIIRSPLFTAKEWYK 202 (335)
Q Consensus 126 ~~~~v~~~d~~~~~~~--~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g-~~~~~~~~~~~~~~~~~~ 202 (335)
..|..||.++++.. ...... ....+.+++.|+|..+++....+.|..+|... .....+..
T Consensus 333 --~tvklWD~~~~~~~~~~~~~~~-----~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g---------- 395 (524)
T 2j04_B 333 --GYFYIFNPKDIATTKTTVSRFR-----GSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS---------- 395 (524)
T ss_dssp --SEEEEECGGGHHHHCEEEEECS-----CCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE----------
T ss_pred --CeEEEEECCCCCcccccccccc-----cCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec----------
Confidence 36999998765432 111110 12356799999998888888888899998753 22221110
Q ss_pred cccccCeEEEccCCeEEEEECCCCEEEEEeCCCC
Q 039428 203 NVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKE 236 (335)
Q Consensus 203 ~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~ 236 (335)
.....+.++++|+|.++++-+.++.|...++...
T Consensus 396 H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 396 RETTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp CSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred CCCceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 1123789999999977778788899988887653
No 313
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.91 E-value=0.25 Score=45.26 Aligned_cols=157 Identities=14% Similarity=0.128 Sum_probs=87.4
Q ss_pred EEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCC--CCcceEEEeC-------CCCeEEEEEecCCCCccceEE
Q 039428 62 RFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVG--NATMGIAVDR-------PRNRLLVAFTDVLGNKYSALA 131 (335)
Q Consensus 62 ~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~--~~p~Gi~~d~-------~~g~l~v~~~D~~~~~~~~v~ 131 (335)
.++++ ..+++|..||...+.. ... ..+ ..+.+ ...+.+++.| .++++++...+. ..|.
T Consensus 102 ~~las~~~d~~v~lw~~~~~~~----~~~-~~~--~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D-----~tv~ 169 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKNETI----ITQ-HVL--GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD-----CTLI 169 (393)
T ss_dssp EEEEEEETTSCEEEEEEETTEE----EEE-EEE--CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT-----SEEE
T ss_pred CEEEEEeCCCcEEEEECCCCcc----cee-eee--cccCCCCCceEEEEEccccccccCCCCCEEEEEECC-----CeEE
Confidence 34444 7788888888543431 111 111 11122 3568888864 246677754332 4699
Q ss_pred EEECCCCeEE-EEeecCCCccCCCCCCceeECCCC-cEEEEeCCCCeEEEEccCCcEEE-EecC-C-----cccccc---
Q 039428 132 AYDLSTWKRL-FLTQLSGKSEEKSTADDIAVDAEG-NAYVTDVVSSKIWKVGVEGQLLS-IIRS-P-----LFTAKE--- 199 (335)
Q Consensus 132 ~~d~~~~~~~-~~~~~~~~~~~~~~p~~~~vd~~G-~lyV~d~~~~~I~~~d~~g~~~~-~~~~-~-----~~~~~~--- 199 (335)
.||.+++... ..... ......+++.|++ ++.++.+..+.|..+|....... .... . +.....
T Consensus 170 ~Wd~~~~~~~~~~~~~------~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~ 243 (393)
T 4gq1_A 170 IWRLTDEGPILAGYPL------SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP 243 (393)
T ss_dssp EEEEETTEEEEEEEEC------SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG
T ss_pred EEECCCCceeeeecCC------CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc
Confidence 9998766544 22222 2345679999987 57777788899999997643221 1100 0 000000
Q ss_pred ------ccccccccCeEEEc-cCCeEEEEECCCCEEEEEeCCCC
Q 039428 200 ------WYKNVFGLNGIVYH-PDGFLIVIHMCSGNLFKIDIRKE 236 (335)
Q Consensus 200 ------~~~~~~~p~Gia~~-~dg~Lyvad~~~~~v~~~d~~~~ 236 (335)
..........+++. +||..+++-..++++...|+...
T Consensus 244 ~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~ 287 (393)
T 4gq1_A 244 LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN 287 (393)
T ss_dssp GC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---
T ss_pred ceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC
Confidence 01112235677776 68877778888899988888764
No 314
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.88 E-value=0.32 Score=48.03 Aligned_cols=123 Identities=11% Similarity=-0.005 Sum_probs=71.8
Q ss_pred ceeeeEEcC-CCCEEEEEecC-----------CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEE
Q 039428 50 LCETAKWDD-VGRRFLVSFLD-----------GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLV 117 (335)
Q Consensus 50 ~pegia~d~-~g~~~~~~~~~-----------~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v 117 (335)
.+...++.+ +|++|+++... ..++++|+.++++ .. +...+........++++.. +++||+
T Consensus 187 ~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w-----~~--~~~~~~~~~~~~~~~~~~~-~g~lyv 258 (656)
T 1k3i_A 187 VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIV-----SD--RTVTVTKHDMFCPGISMDG-NGQIVV 258 (656)
T ss_dssp CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCB-----CC--CEEEECSCCCSSCEEEECT-TSCEEE
T ss_pred CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcE-----Ee--CcccCCCCCCccccccCCC-CCCEEE
Confidence 456778887 78888886321 1689998654442 11 1111111112345677764 799999
Q ss_pred EEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeC-C-----CCeEEEEccCCcEEE
Q 039428 118 AFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDV-V-----SSKIWKVGVEGQLLS 188 (335)
Q Consensus 118 ~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~-~-----~~~I~~~d~~g~~~~ 188 (335)
..+.. . ..+.+||+.+++-....+.+. ...-..+++-++|++||... . ...+.++|+....-.
T Consensus 259 ~GG~~-~---~~v~~yd~~t~~W~~~~~~~~----~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 259 TGGND-A---KKTSLYDSSSDSWIPGPDMQV----ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp ECSSS-T---TCEEEEEGGGTEEEECCCCSS----CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred eCCCC-C---CceEEecCcCCceeECCCCCc----cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce
Confidence 63211 1 359999999876543222211 11223456667899999865 2 257899999865543
No 315
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.87 E-value=0.22 Score=44.10 Aligned_cols=220 Identities=15% Similarity=0.058 Sum_probs=116.2
Q ss_pred EcCCCCEEEEEec-----C------CeEEEEECCCCCCCcceeeeeEEeecCCcCC-CCcceEEEeCCCCeEEEEEecC-
Q 039428 56 WDDVGRRFLVSFL-----D------GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVG-NATMGIAVDRPRNRLLVAFTDV- 122 (335)
Q Consensus 56 ~d~~g~~~~~~~~-----~------~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~-~~p~Gi~~d~~~g~l~v~~~D~- 122 (335)
...++.+|++... . ..++++|+.+.+ |...+.+.. ..-+++++. ++.||+..+-.
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~----------W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~ 109 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE----------WLGMPPLPSPRCLFGLGEA--LNSIYVVGGREI 109 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE----------EEECCCBSSCEESCEEEEE--TTEEEEECCEES
T ss_pred EEECCEEEEEcCcccCCCCCccccccceEEecCCCCe----------EEECCCCCcchhceeEEEE--CCEEEEEeCCcC
Confidence 3456778877732 1 238899964333 322222221 223556555 68999974311
Q ss_pred --CCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCC------CCeEEEEccCCcEEEEecCCc
Q 039428 123 --LGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV------SSKIWKVGVEGQLLSIIRSPL 194 (335)
Q Consensus 123 --~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~------~~~I~~~d~~g~~~~~~~~~~ 194 (335)
.....+.+.+||+.+++-....+.+. .+....++--++++||.... ...++++|+....-..+..
T Consensus 110 ~~~~~~~~~~~~~d~~~~~W~~~~~~p~-----~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-- 182 (315)
T 4asc_A 110 KDGERCLDSVMCYDRLSFKWGESDPLPY-----VVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAP-- 182 (315)
T ss_dssp STTCCBCCCEEEEETTTTEEEECCCCSS-----CCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCC--
T ss_pred CCCCcccceEEEECCCCCcEeECCCCCC-----cccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCC--
Confidence 11122569999999886543322211 12222223346789997543 3679999998654432211
Q ss_pred cccccccccccccCeEEEccCCeEEEEECC-----CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEe
Q 039428 195 FTAKEWYKNVFGLNGIVYHPDGFLIVIHMC-----SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAG 269 (335)
Q Consensus 195 ~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~-----~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~ 269 (335)
.. ....-.+.+.. ++.||+.-.. .+.++++|+... ....+...... .. -..++.. ++++|+.+
T Consensus 183 ~p------~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~-r~-~~~~~~~-~~~l~v~G 250 (315)
T 4asc_A 183 MQ------TARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDN--KWAPFEAFPQE-RS-SLSLVSL-VGTLYAIG 250 (315)
T ss_dssp CS------SCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTT--EEEEECCCSSC-CB-SCEEEEE-TTEEEEEE
T ss_pred CC------CchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCC--eEEECCCCCCc-cc-ceeEEEE-CCEEEEEC
Confidence 11 11122344444 6788876432 237999999887 55555321101 01 1234433 57889884
Q ss_pred cC--------------CCeEEEEEcCCC-cEEEEEeeeecCCCCCcceEEEEeCCeEEE
Q 039428 270 NP--------------YPSARLVESSDG-WETASVVAKFNGPTHRVATAATVKDGRVYL 313 (335)
Q Consensus 270 ~~--------------~~~~~v~~~~~~-~~~~~~~~~~~~p~~~~Pt~va~~~g~lyV 313 (335)
.. .+.+.+++...+ |+.. ...|.. -.++++-+++|||
T Consensus 251 G~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-----~~~~r~--~~~~~~~~~~l~v 302 (315)
T 4asc_A 251 GFATLETESGELVPTELNDIWRYNEEEKKWEGV-----LREIAY--AAGATFLPVRLNV 302 (315)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE-----ESCSSC--CSSCEEEEEEECG
T ss_pred CccccCcCCccccccccCcEEEecCCCChhhhh-----ccCCcC--ccceEEeCCEEEE
Confidence 31 123556666555 7643 122322 2355666888887
No 316
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.86 E-value=0.45 Score=47.52 Aligned_cols=209 Identities=14% Similarity=0.114 Sum_probs=112.6
Q ss_pred CCCCEEEEEec----CCeEEEEECCCCCCCcceeeeeEEe-ecC--CcC-CCCcceEEEeCCCCeEEEEEecCCCC-ccc
Q 039428 58 DVGRRFLVSFL----DGGVGQVLVPDEYSPGTVLEEVKLV-KED--DVV-GNATMGIAVDRPRNRLLVAFTDVLGN-KYS 128 (335)
Q Consensus 58 ~~g~~~~~~~~----~~~I~~~d~~~g~~~~~v~~~~~~~-~~~--~~~-~~~p~Gi~~d~~~g~l~v~~~D~~~~-~~~ 128 (335)
-++.+|+++.. .+.++++|+.+..+ .. .. ..| .+. ....+.+++...++.|||..+-.... ..+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W-----~~--~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~ 468 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKI-----DM--KNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLS 468 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCE-----EE--EECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeE-----EE--eccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccc
Confidence 55677777632 35799999654442 21 11 111 111 12335666552268899964321111 124
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCC--eEEEEccCCcEEEEecCCccccccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSS--KIWKVGVEGQLLSIIRSPLFTAKEWYKNVFG 206 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~--~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (335)
.+++||+.+++-....+.+. .-.-..+++-.+|.+||.....+ .++++|+....-..+.. .. ..+....+
T Consensus 469 dv~~yd~~t~~W~~~~~~p~----~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~---~g-~~p~~r~~ 540 (695)
T 2zwa_A 469 DNWIFDMKTREWSMIKSLSH----TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP---KD-EFFQNSLV 540 (695)
T ss_dssp CCEEEETTTTEEEECCCCSB----CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC---SS-GGGGSCCB
T ss_pred cEEEEeCCCCcEEECCCCCC----CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC---CC-CCCCcccc
Confidence 69999999876543322211 12223344434789999754322 79999998655432211 00 00111223
Q ss_pred cCeEEEccC-CeEEEEECC-------CCEEEEEeCCCCcee------EEEEec-cCCcCCCCCCeEEEcCCCcEEEEec-
Q 039428 207 LNGIVYHPD-GFLIVIHMC-------SGNLFKIDIRKEEEE------VKLIEL-RGGSSLSLGDGLALLSPTKLVVAGN- 270 (335)
Q Consensus 207 p~Gia~~~d-g~Lyvad~~-------~~~v~~~d~~~~~~~------~~~~~~-~g~~~~~~pdGia~d~~g~l~va~~- 270 (335)
...++++.+ +.||+.-.. .+.++++|+... . ...+.. +. . -..-..+++..++.+||.+.
T Consensus 541 ~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~--~w~~~~~W~~~~~~p~-~-~R~~~~~~~~~~~~iyv~GG~ 616 (695)
T 2zwa_A 541 SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE--NATEPITVIKKLQHPL-F-QRYGSQIKYITPRKLLIVGGT 616 (695)
T ss_dssp SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT--CSSCCEEEEEEEECGG-G-CCBSCEEEEEETTEEEEECCB
T ss_pred eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC--ccccceEEEEcCCCCC-C-CcccceEEEeCCCEEEEECCc
Confidence 444676766 789987532 367999999887 4 333321 11 0 01123555555589999843
Q ss_pred -------CCCeEEEEEcCCC-cE
Q 039428 271 -------PYPSARLVESSDG-WE 285 (335)
Q Consensus 271 -------~~~~~~v~~~~~~-~~ 285 (335)
..+.+.+++...+ |.
T Consensus 617 ~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 617 SPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp CSSCCCCTTTSEEEEETTTTEEE
T ss_pred cCCCCCCCCCeEEEEECCCCeEE
Confidence 1356788887665 76
No 317
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.82 E-value=0.24 Score=43.86 Aligned_cols=220 Identities=13% Similarity=0.111 Sum_probs=117.6
Q ss_pred EcCCCCEEEEEec----CC-------eEEEEECCCCCCCcceeeeeEEeecCCcCC-CCcceEEEeCCCCeEEEEEecC-
Q 039428 56 WDDVGRRFLVSFL----DG-------GVGQVLVPDEYSPGTVLEEVKLVKEDDVVG-NATMGIAVDRPRNRLLVAFTDV- 122 (335)
Q Consensus 56 ~d~~g~~~~~~~~----~~-------~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~-~~p~Gi~~d~~~g~l~v~~~D~- 122 (335)
...++.+|++... .+ .++++|+.+.+ |...+.+.. ..-+++++. ++.||+.....
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~----------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 120 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSE----------WVGLPPLPSARCLFGLGEV--DDKIYVVAGKDL 120 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTE----------EEECSCBSSCBCSCEEEEE--TTEEEEEEEEBT
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCc----------EEECCCCCccccccceEEE--CCEEEEEcCccC
Confidence 3456778777731 11 28899864333 332232221 233566665 68899975422
Q ss_pred -CCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCC------CCeEEEEccCCcEEEEecCCcc
Q 039428 123 -LGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV------SSKIWKVGVEGQLLSIIRSPLF 195 (335)
Q Consensus 123 -~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~------~~~I~~~d~~g~~~~~~~~~~~ 195 (335)
.....+.+.+||+.+++-....+.+.+ . .-..+++ -+|.+||.... ...++++|+....-..+.. .
T Consensus 121 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~---r-~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~--~ 193 (318)
T 2woz_A 121 QTEASLDSVLCYDPVAAKWSEVKNLPIK---V-YGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAP--M 193 (318)
T ss_dssp TTCCEEEEEEEEETTTTEEEEECCCSSC---E-ESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECC--C
T ss_pred CCCcccceEEEEeCCCCCEeECCCCCCc---c-cccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCC--C
Confidence 111225699999998866544333211 1 1122333 56789997532 4579999998665433221 1
Q ss_pred ccccccccccccCeEEEccCCeEEEEECC-----CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEec
Q 039428 196 TAKEWYKNVFGLNGIVYHPDGFLIVIHMC-----SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGN 270 (335)
Q Consensus 196 ~~~~~~~~~~~p~Gia~~~dg~Lyvad~~-----~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~ 270 (335)
. ....-.+.+.. ++.||+.-.. .+.++++|+... ....+...... ..-..+++ -++.+|+.+.
T Consensus 194 p------~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~--r~~~~~~~-~~~~i~v~GG 261 (318)
T 2woz_A 194 K------TPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTN--KWEVMTEFPQE--RSSISLVS-LAGSLYAIGG 261 (318)
T ss_dssp S------SCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTC--CEEECCCCSSC--CBSCEEEE-ETTEEEEECC
T ss_pred C------CCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCC--eEEECCCCCCc--ccceEEEE-ECCEEEEECC
Confidence 1 11123344544 6788876422 256889999887 44444311100 01123343 3578998843
Q ss_pred C--------------CCeEEEEEcCCC-cEEEEEeeeecCCCCCcceEEEEeCCeEEE
Q 039428 271 P--------------YPSARLVESSDG-WETASVVAKFNGPTHRVATAATVKDGRVYL 313 (335)
Q Consensus 271 ~--------------~~~~~v~~~~~~-~~~~~~~~~~~~p~~~~Pt~va~~~g~lyV 313 (335)
. .+.+++++...+ |... . |..+.-.++++-+++|||
T Consensus 262 ~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-----~--~~~r~~~~~~~~~~~iyi 312 (318)
T 2woz_A 262 FAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM-----L--KEIRYASGASCLATRLNL 312 (318)
T ss_dssp BCCBC----CCBCCBCCCEEEEETTTTEEEEE-----E--SCCGGGTTCEEEEEEEEG
T ss_pred eeccCCCCceeccceeeeEEEEeCCCCEehhh-----c--ccccccccceeeCCEEEE
Confidence 1 245777777655 7643 1 222223355566889997
No 318
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.73 E-value=0.011 Score=58.76 Aligned_cols=112 Identities=9% Similarity=0.113 Sum_probs=69.8
Q ss_pred ceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEEeC--------CC
Q 039428 104 MGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDV--------VS 174 (335)
Q Consensus 104 ~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~--------~~ 174 (335)
..+.+.+ ++.+++. . .. ..|+.+|.++++......... ........++++|||+ +.++.. ..
T Consensus 19 ~~~~~s~-dg~~~~~-~-~d----~~i~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~ 89 (719)
T 1z68_A 19 FFPNWIS-GQEYLHQ-S-AD----NNIVLYNIETGQSYTILSNRT--MKSVNASNYGLSPDRQFVYLESDYSKLWRYSYT 89 (719)
T ss_dssp CCCEESS-SSEEEEE-C-TT----SCEEEEESSSCCEEEEECHHH--HHTTTCSEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred CccEECC-CCeEEEE-c-CC----CCEEEEEcCCCcEEEEEcccc--ccccceeeEEECCCCCeEEEEecCceeEEeecc
Confidence 3667876 5665553 2 21 359999999987664332210 0011367899999997 333322 24
Q ss_pred CeEEEEccCCcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCC
Q 039428 175 SKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKE 236 (335)
Q Consensus 175 ~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~ 236 (335)
+.|+.+|.++.... ....+. .....++++||| .|.++. .+.|+.++..++
T Consensus 90 ~~i~~~d~~~g~~~--~~~~l~--------~~~~~~~~SPDG~~la~~~--~~~i~~~~~~~g 140 (719)
T 1z68_A 90 ATYYIYDLSNGEFV--RGNELP--------RPIQYLCWSPVGSKLAYVY--QNNIYLKQRPGD 140 (719)
T ss_dssp EEEEEEETTTTEEC--CSSCCC--------SSBCCEEECSSTTCEEEEE--TTEEEEESSTTS
T ss_pred eEEEEEECCCCccc--cceecC--------cccccceECCCCCEEEEEE--CCeEEEEeCCCC
Confidence 78999998876541 000111 136789999999 666553 568999999876
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.70 E-value=0.28 Score=42.95 Aligned_cols=209 Identities=14% Similarity=0.124 Sum_probs=110.2
Q ss_pred CeEEEEECCCCCCCcceeeeeEEeecCCcCC-CCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCC
Q 039428 70 GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVG-NATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSG 148 (335)
Q Consensus 70 ~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~-~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~ 148 (335)
..++.+|+.+.. |...+.+.. ..-+++++. ++.||+..+.......+.+.+||+.+++-....+.+.
T Consensus 30 ~~~~~~d~~~~~----------W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 97 (302)
T 2xn4_A 30 RSVECYDFKEER----------WHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRD 97 (302)
T ss_dssp CCEEEEETTTTE----------EEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSS
T ss_pred CcEEEEcCcCCc----------EeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCc
Confidence 568899864333 222222111 223455554 6889996332111122469999999886554333321
Q ss_pred CccCCCCCCceeECCCCcEEEEeCC-----CCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccCCeEEEEEC
Q 039428 149 KSEEKSTADDIAVDAEGNAYVTDVV-----SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHM 223 (335)
Q Consensus 149 ~~~~~~~p~~~~vd~~G~lyV~d~~-----~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~ 223 (335)
+ ... ..+++ -++.+||.... ...++++|+....-..+.. +. ....-.+.+.. ++.||+.-.
T Consensus 98 ~---r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~--~p------~~r~~~~~~~~-~~~iyv~GG 163 (302)
T 2xn4_A 98 R---RST-LGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAP--MN------TRRSSVGVGVV-GGLLYAVGG 163 (302)
T ss_dssp C---CBS-CEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECC--CS------SCCBSCEEEEE-TTEEEEECC
T ss_pred c---ccc-eEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCC--CC------CcccCceEEEE-CCEEEEEeC
Confidence 1 112 22333 36789996432 2468899988655443221 11 11223344444 778988632
Q ss_pred C-------CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecC-----CCeEEEEEcCCC-cEEEEEe
Q 039428 224 C-------SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNP-----YPSARLVESSDG-WETASVV 290 (335)
Q Consensus 224 ~-------~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~-----~~~~~v~~~~~~-~~~~~~~ 290 (335)
. .+.++++|+... ....+...... .. -..+++. ++.+|+.+.. .+.+.+++...+ |...
T Consensus 164 ~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~-r~-~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~--- 235 (302)
T 2xn4_A 164 YDVASRQCLSTVECYNATTN--EWTYIAEMSTR-RS-GAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQV--- 235 (302)
T ss_dssp EETTTTEECCCEEEEETTTT--EEEEECCCSSC-CB-SCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEE---
T ss_pred CCCCCCccccEEEEEeCCCC--cEEECCCCccc-cc-cccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeC---
Confidence 1 356999999887 55554321101 11 1234433 5789999431 256778887655 6543
Q ss_pred eeecCCCCCcceEEEEeCCeEEEE
Q 039428 291 AKFNGPTHRVATAATVKDGRVYLS 314 (335)
Q Consensus 291 ~~~~~p~~~~Pt~va~~~g~lyV~ 314 (335)
.....+. .-.+++.-+++|||.
T Consensus 236 ~~~~~~r--~~~~~~~~~~~i~v~ 257 (302)
T 2xn4_A 236 ADMNMCR--RNAGVCAVNGLLYVV 257 (302)
T ss_dssp CCCSSCC--BSCEEEEETTEEEEE
T ss_pred CCCCCcc--ccCeEEEECCEEEEE
Confidence 2222222 223455568999984
No 320
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.67 E-value=0.25 Score=49.13 Aligned_cols=160 Identities=13% Similarity=0.125 Sum_probs=86.7
Q ss_pred eeeeEEcCCCCEEEEE-ecC----CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCC--
Q 039428 51 CETAKWDDVGRRFLVS-FLD----GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVL-- 123 (335)
Q Consensus 51 pegia~d~~g~~~~~~-~~~----~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~-- 123 (335)
-.+++|+|+|+.+..+ ... ..|+++|..+++. +.. . .++. ...++++. ++..||.+..+..
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~----~~~--~--~~~~---k~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQP----LET--P--LKDV---KFSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSE----EEE--E--EEEE---ESCCCEEE-TTTEEEEEESSCCC-
T ss_pred EEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCC----Ccc--c--cCCc---eeccEEEe-CCCEEEEEEecCccc
Confidence 4678999999966655 323 3699999765551 211 1 1111 12355666 5677777654421
Q ss_pred -----CCccceEEEEECCCCeE--EEEeecCCCccCCCCCCceeECCCCc-EEEEeC---CCCeEEEEccCCc---EEEE
Q 039428 124 -----GNKYSALAAYDLSTWKR--LFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDV---VSSKIWKVGVEGQ---LLSI 189 (335)
Q Consensus 124 -----~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~---~~~~I~~~d~~g~---~~~~ 189 (335)
......|++++..+++. ...... +......-.++.+++||+ ++++.. ....||.++.++. ...+
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~--~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l 276 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQEDDRLVFGA--IPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTV 276 (693)
T ss_dssp ------CCCCEEEEEETTSCGGGCEEEESC--SGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEE
T ss_pred ccccccCCCcEEEEEECCCCcccceEEEec--CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEE
Confidence 01225699998876532 111221 110012334688999997 545432 2358999996532 3332
Q ss_pred ecCCccccccccccccccCeEEEccCC-eEEEEECC---CCEEEEEeCCCC
Q 039428 190 IRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMC---SGNLFKIDIRKE 236 (335)
Q Consensus 190 ~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~---~~~v~~~d~~~~ 236 (335)
... . ...--.++++| .||+.... +.+|++++++++
T Consensus 277 ~~~--~----------~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~ 315 (693)
T 3iuj_A 277 QGD--L----------DADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANP 315 (693)
T ss_dssp ECS--S----------SSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred eCC--C----------CceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 111 0 01111256665 77655433 479999999876
No 321
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.63 E-value=0.33 Score=42.79 Aligned_cols=220 Identities=14% Similarity=0.088 Sum_probs=115.6
Q ss_pred CCCEEEEEec----CCeEEEEECCCCCCCcceeeeeEEeecCCcCC-CCcceEEEeCCCCeEEEEEec----CCCCccce
Q 039428 59 VGRRFLVSFL----DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVG-NATMGIAVDRPRNRLLVAFTD----VLGNKYSA 129 (335)
Q Consensus 59 ~g~~~~~~~~----~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~-~~p~Gi~~d~~~g~l~v~~~D----~~~~~~~~ 129 (335)
++.+|++... .+.++++|+.+.+ |...+.+.. ..-+++++. ++.||+..+. ......+.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~----------W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~ 91 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGT----------WLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSA 91 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTE----------EEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCC
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCe----------EeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecce
Confidence 4556666531 2579999964333 322222211 223455554 6889996321 10011245
Q ss_pred EEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCC-----CCeEEEEccCCcEEEEecCCccccccccccc
Q 039428 130 LAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV-----SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNV 204 (335)
Q Consensus 130 v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~-----~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~ 204 (335)
+++||+.+++-....+.+.+ .... .+++ -+|.+||.... ...++++|+....-..+.. +. ..
T Consensus 92 ~~~~d~~~~~W~~~~~~p~~---r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~--~p------~~ 158 (308)
T 1zgk_A 92 LDCYNPMTNQWSPCAPMSVP---RNRI-GVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAP--ML------TR 158 (308)
T ss_dssp EEEEETTTTEEEECCCCSSC---CBTC-EEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCC--CS------SC
T ss_pred EEEECCCCCeEeECCCCCcC---cccc-EEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCC--CC------cc
Confidence 99999998865433222111 1222 2222 36789997431 3578999998655442211 11 11
Q ss_pred cccCeEEEccCCeEEEEECC-----CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecC-----CCe
Q 039428 205 FGLNGIVYHPDGFLIVIHMC-----SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNP-----YPS 274 (335)
Q Consensus 205 ~~p~Gia~~~dg~Lyvad~~-----~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~-----~~~ 274 (335)
..-.+.+.. ++.||+.-.. .+.++++|+... ....+...... ..-..+++. ++.+|+.+.. .+.
T Consensus 159 r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~--r~~~~~~~~-~~~iyv~GG~~~~~~~~~ 232 (308)
T 1zgk_A 159 RIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERN--EWRMITAMNTI--RSGAGVCVL-HNCIYAAGGYDGQDQLNS 232 (308)
T ss_dssp CBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTT--EEEECCCCSSC--CBSCEEEEE-TTEEEEECCBCSSSBCCC
T ss_pred ccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCC--eEeeCCCCCCc--cccceEEEE-CCEEEEEeCCCCCCccce
Confidence 223344444 6788886422 467999999887 44444311100 112234444 6789998531 256
Q ss_pred EEEEEcCCC-cEEEEEeeeecCCCCCcceEEEEeCCeEEEE
Q 039428 275 ARLVESSDG-WETASVVAKFNGPTHRVATAATVKDGRVYLS 314 (335)
Q Consensus 275 ~~v~~~~~~-~~~~~~~~~~~~p~~~~Pt~va~~~g~lyV~ 314 (335)
+.+++...+ |... .....+. .-.++++-+++|||.
T Consensus 233 v~~yd~~~~~W~~~---~~~p~~r--~~~~~~~~~~~i~v~ 268 (308)
T 1zgk_A 233 VERYDVETETWTFV---APMKHRR--SALGITVHQGRIYVL 268 (308)
T ss_dssp EEEEETTTTEEEEC---CCCSSCC--BSCEEEEETTEEEEE
T ss_pred EEEEeCCCCcEEEC---CCCCCCc--cceEEEEECCEEEEE
Confidence 777887655 6542 2222222 223455568999984
No 322
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.59 E-value=0.33 Score=42.42 Aligned_cols=209 Identities=15% Similarity=0.139 Sum_probs=110.3
Q ss_pred CeEEEEECCCCCCCcceeeeeEEeecCCcCC-CCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCe---EEEEee
Q 039428 70 GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVG-NATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWK---RLFLTQ 145 (335)
Q Consensus 70 ~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~-~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~---~~~~~~ 145 (335)
+.++++|+.+.+ |...+.+.. ..-++++.. ++.||+...-......+.+++||+.+++ -....+
T Consensus 31 ~~~~~~d~~~~~----------W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~ 98 (301)
T 2vpj_A 31 DVVEKYDPKTQE----------WSFLPSITRKRRYVASVSL--HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAP 98 (301)
T ss_dssp CCEEEEETTTTE----------EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECC
T ss_pred eEEEEEcCCCCe----------EEeCCCCChhhccccEEEE--CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCC
Confidence 578999964333 322222211 223455554 6889996332111112469999998876 443323
Q ss_pred cCCCccCCCCCCceeECCCCcEEEEeCC-----CCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccCCeEEE
Q 039428 146 LSGKSEEKSTADDIAVDAEGNAYVTDVV-----SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIV 220 (335)
Q Consensus 146 ~~~~~~~~~~p~~~~vd~~G~lyV~d~~-----~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyv 220 (335)
.+. . .... .+++ -++.+||.... ...++++|+....-..+.. .. ....-.+.+.. ++.||+
T Consensus 99 ~p~--~-r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~--~p------~~r~~~~~~~~-~~~iyv 164 (301)
T 2vpj_A 99 MNV--R-RGLA-GATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGD--MQ------TAREGAGLVVA-SGVIYC 164 (301)
T ss_dssp CSS--C-CBSC-EEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE--CS------SCCBSCEEEEE-TTEEEE
T ss_pred CCC--C-ccce-eEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCC--CC------CCcccceEEEE-CCEEEE
Confidence 211 1 1222 2332 36789997532 3579999988655432211 11 11123344444 778988
Q ss_pred EECC-----CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecC-----CCeEEEEEcCCC-cEEEEE
Q 039428 221 IHMC-----SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNP-----YPSARLVESSDG-WETASV 289 (335)
Q Consensus 221 ad~~-----~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~-----~~~~~v~~~~~~-~~~~~~ 289 (335)
.-.. .+.++++|+... ....+.... .... -..++.. ++.+|+.+.. .+.+.+++...+ |...
T Consensus 165 ~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p-~~r~-~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-- 237 (301)
T 2vpj_A 165 LGGYDGLNILNSVEKYDPHTG--HWTNVTPMA-TKRS-GAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV-- 237 (301)
T ss_dssp ECCBCSSCBCCCEEEEETTTT--EEEEECCCS-SCCB-SCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEE--
T ss_pred ECCCCCCcccceEEEEeCCCC--cEEeCCCCC-cccc-cceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCcEEEC--
Confidence 6422 467999999887 555553111 1011 1233333 5789998431 356777887655 6542
Q ss_pred eeeecCCCCCcceEEEEeCCeEEEE
Q 039428 290 VAKFNGPTHRVATAATVKDGRVYLS 314 (335)
Q Consensus 290 ~~~~~~p~~~~Pt~va~~~g~lyV~ 314 (335)
.....+. .-.+++.-+++|||.
T Consensus 238 -~~~p~~r--~~~~~~~~~~~i~v~ 259 (301)
T 2vpj_A 238 -TSMTTPR--CYVGATVLRGRLYAI 259 (301)
T ss_dssp -CCCSSCC--BSCEEEEETTEEEEE
T ss_pred -CCCCCcc--cceeEEEECCEEEEE
Confidence 2222222 223455568999984
No 323
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.54 E-value=0.28 Score=49.09 Aligned_cols=201 Identities=12% Similarity=0.141 Sum_probs=103.0
Q ss_pred eeeEEcCCCCEEEEE-ecC-------------CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEE
Q 039428 52 ETAKWDDVGRRFLVS-FLD-------------GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLV 117 (335)
Q Consensus 52 egia~d~~g~~~~~~-~~~-------------~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v 117 (335)
.+++|+|+ +.++.+ ... .+|++++..++.. +...+...+... ....++.+++++..|++
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~-----~~~lv~~~~~~~-~~~~~~~~SpDG~~l~~ 284 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQS-----ADQPVFATPELP-KRGHGASVSSDGRWVVI 284 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGG-----GCEEEECCTTCT-TCEEEEEECTTSCEEEE
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCch-----hCEEEeccCCCC-eEEEEEEECCCCCEEEE
Confidence 47899999 755555 322 2589998543321 111122222210 12467888874444555
Q ss_pred EEecCCCCccceEEEEECCCC--e-EEEEeecCCCccCCCCCCceeECCCCc-EEEEeC---CCCeEEEEccCC---cEE
Q 039428 118 AFTDVLGNKYSALAAYDLSTW--K-RLFLTQLSGKSEEKSTADDIAVDAEGN-AYVTDV---VSSKIWKVGVEG---QLL 187 (335)
Q Consensus 118 ~~~D~~~~~~~~v~~~d~~~~--~-~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d~---~~~~I~~~d~~g---~~~ 187 (335)
...+.... .+.|+.+|.+++ + ....... ....... ++++|. +|+... .+.+|++++.++ +..
T Consensus 285 ~~~~~~~~-~~~l~~~d~~~~~~~~~~~l~~~------~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~ 356 (741)
T 1yr2_A 285 TSSEGTDP-VNTVHVARVTNGKIGPVTALIPD------LKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFD 356 (741)
T ss_dssp EEECTTCS-CCEEEEEEEETTEECCCEEEECS------SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEE
T ss_pred EEEccCCC-cceEEEEECCCCCCcccEEecCC------CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccE
Confidence 43332111 157999998876 3 3322211 1111112 346664 666532 367899999875 223
Q ss_pred EEecCCccccccccccccccCeEEEccCCeEEEEECCC--CEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCc-
Q 039428 188 SIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCS--GNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTK- 264 (335)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~--~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~- 264 (335)
.++... .....+++++ ++.|+++...+ .+|++++++++ ..+.+..++ .....++.+++++.
T Consensus 357 ~l~~~~----------~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~--~~~~l~~~~---~~~v~~~~~s~d~~~ 420 (741)
T 1yr2_A 357 TVVPES----------KDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGK--PAGAVSLPG---IGSASGLSGRPGDRH 420 (741)
T ss_dssp EEECCC----------SSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSC--EEEECBCSS---SCEEEEEECCBTCSC
T ss_pred EEecCC----------CCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC--ceeeccCCC---CeEEEEeecCCCCCE
Confidence 322110 0114567777 56777665544 47889988665 455554322 12245677777764
Q ss_pred EEEE-ecCC--CeEEEEEcCCC
Q 039428 265 LVVA-GNPY--PSARLVESSDG 283 (335)
Q Consensus 265 l~va-~~~~--~~~~v~~~~~~ 283 (335)
++++ .... ..+..++...+
T Consensus 421 l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 421 AYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EEEEEEETTEEEEEEEEETTTT
T ss_pred EEEEEcCCCCCCEEEEEECCCC
Confidence 5555 2211 24555555443
No 324
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.52 E-value=0.42 Score=42.75 Aligned_cols=187 Identities=8% Similarity=-0.013 Sum_probs=98.4
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceE
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSAL 130 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v 130 (335)
+.+++..+++++|++. ..+.|++-+. .|+. .+ .+..+. .....++++++ ++++|++.. . ..+
T Consensus 124 ~~~i~~~~~~~~~~~~-~~g~v~~S~D-gG~t----W~---~~~~~~--~~~~~~~~~~~-~~~~~~~g~--~----G~~ 185 (327)
T 2xbg_A 124 PRLIKALGNGSAEMIT-NVGAIYRTKD-SGKN----WQ---ALVQEA--IGVMRNLNRSP-SGEYVAVSS--R----GSF 185 (327)
T ss_dssp EEEEEEEETTEEEEEE-TTCCEEEESS-TTSS----EE---EEECSC--CCCEEEEEECT-TSCEEEEET--T----SSE
T ss_pred eEEEEEECCCCEEEEe-CCccEEEEcC-CCCC----CE---EeecCC--CcceEEEEEcC-CCcEEEEEC--C----CcE
Confidence 4567766666655544 4667888753 3441 11 111121 12456888886 678887532 1 236
Q ss_pred EEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccC-CcEEEEecCCccccccccccccccCe
Q 039428 131 AAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVE-GQLLSIIRSPLFTAKEWYKNVFGLNG 209 (335)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~p~G 209 (335)
++-+-.+++........ . ......++++++|++|+... .+.+++-+.+ |+.-. ....|. .+.......
T Consensus 186 ~~S~d~gG~tW~~~~~~---~-~~~~~~~~~~~~g~~~~~~~-~G~~~~s~~D~G~tW~-----~~~~~~-~~~~~~~~~ 254 (327)
T 2xbg_A 186 YSTWEPGQTAWEPHNRT---T-SRRLHNMGFTPDGRLWMIVN-GGKIAFSDPDNSENWG-----ELLSPL-RRNSVGFLD 254 (327)
T ss_dssp EEEECTTCSSCEEEECC---S-SSCEEEEEECTTSCEEEEET-TTEEEEEETTEEEEEC-----CCBCTT-SSCCSCEEE
T ss_pred EEEeCCCCCceeECCCC---C-CCccceeEECCCCCEEEEeC-CceEEEecCCCCCeeE-----eccCCc-ccCCcceEE
Confidence 66543223221111221 1 24567788999999998754 4677776455 43322 111110 011123567
Q ss_pred EEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEec
Q 039428 210 IVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGN 270 (335)
Q Consensus 210 ia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~ 270 (335)
|++++++.+|++.. .+.|++- .++++ ..+.+...... -..-..+++++++++|++..
T Consensus 255 v~~~~~~~~~~~g~-~g~i~~S-~DgG~-tW~~~~~~~~~-~~~~~~v~~~~~~~~~~~G~ 311 (327)
T 2xbg_A 255 LAYRTPNEVWLAGG-AGALLCS-QDGGQ-TWQQDVDVKKV-PSNFYKILFFSPDQGFILGQ 311 (327)
T ss_dssp EEESSSSCEEEEES-TTCEEEE-SSTTS-SCEECGGGTTS-SSCCCEEEEEETTEEEEECS
T ss_pred EEecCCCEEEEEeC-CCeEEEe-CCCCc-ccEEcCccCCC-CCCeEEEEEECCCceEEEcC
Confidence 78888888888764 4556654 34432 44444321000 12246788877778887755
No 325
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.50 E-value=0.58 Score=45.24 Aligned_cols=200 Identities=13% Similarity=0.119 Sum_probs=115.1
Q ss_pred CCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEe--CCCCeEEEEEecCC----CC------
Q 039428 59 VGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVD--RPRNRLLVAFTDVL----GN------ 125 (335)
Q Consensus 59 ~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d--~~~g~l~v~~~D~~----~~------ 125 (335)
+|+.+|+. -.+.+|.|++...=+ +. +.+..|... ..+|+++- |..+.+++.. ... ++
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~-----~d--~Ii~iPn~~--~~Hg~~~~~~p~T~yv~~~~-e~~~P~pndg~~~~~ 210 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMK-----CD--KMITVPNVQ--AIHGLRLQKVPHTKYVFANA-EFIIPHPNDGKVFDL 210 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTE-----EE--EEEECTTCS--CEEEEEECCSSBCCEEEEEE-CSCEESSCSSSCCCT
T ss_pred eeEEEEEecCCCcceEEEECCcEe-----ec--eeEeCCCCc--CcccccccccCCccEEEecc-eeeccCCCCCccccc
Confidence 46666666 567899999853221 22 355667654 67899886 4445555432 211 10
Q ss_pred ----ccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCC---------------CeEEEEcc----
Q 039428 126 ----KYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVS---------------SKIWKVGV---- 182 (335)
Q Consensus 126 ----~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~---------------~~I~~~d~---- 182 (335)
+.+....+|.++.++.+.+... ..+.....|++|...++.+++ .-+..++-
T Consensus 211 ~~~~~y~~f~~iD~~tm~v~~Qv~v~------gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie 284 (638)
T 3sbq_A 211 QDENSYTMYNAIDAETMEMAFQVIVD------GNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVE 284 (638)
T ss_dssp TSTTEEEEEEEEETTTCSEEEEEEES------SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHH
T ss_pred CChhhceEEEEEcCCccEEEEEEEcC------CChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHH
Confidence 1233456788887777665542 245667778888766654422 23333331
Q ss_pred ----CCcEEE-------EecCCccc--ccc---ccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCC------c--
Q 039428 183 ----EGQLLS-------IIRSPLFT--AKE---WYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKE------E-- 237 (335)
Q Consensus 183 ----~g~~~~-------~~~~~~~~--~~~---~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~------~-- 237 (335)
+|+... ++....-. .+. ..|...+|+|+-++||| +++++.-.+.++.+++.+.- +
T Consensus 285 ~~vk~G~~~~~~g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~ 364 (638)
T 3sbq_A 285 AAVKAGDFITLGDSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLA 364 (638)
T ss_dssp HHHHTTCCBCCTTCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCS
T ss_pred HHHhcCCeEEECCCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcccc
Confidence 222211 11000000 000 12345679999999999 99999999999999998741 0
Q ss_pred ---ee-EEEEeccCCcCCCCCCeEEEcCCCcEEEEecCCCeEEEEE
Q 039428 238 ---EE-VKLIELRGGSSLSLGDGLALLSPTKLVVAGNPYPSARLVE 279 (335)
Q Consensus 238 ---~~-~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~~~~~v~~ 279 (335)
.. ...++ .| -+|--.++|++|+.|.+-.-...+...+
T Consensus 365 ~~~~~~~ae~e-~G----lGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 365 DPRDVIVGEPE-LG----LGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CGGGGEEECCB-CC----SCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred CcccceEeecc-CC----CcccEEEECCCCceEeeeeecceEEEEe
Confidence 00 11122 12 3599999999999999965334444433
No 326
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.31 E-value=0.0033 Score=57.88 Aligned_cols=146 Identities=12% Similarity=0.093 Sum_probs=60.3
Q ss_pred eeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEE
Q 039428 53 TAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAA 132 (335)
Q Consensus 53 gia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~ 132 (335)
++++ +++.+|+...++.|+.+|..+|+ ++ |....+ ......+.. ++.+|++. ... +.|+.
T Consensus 4 sP~v--~~~~v~~gs~dg~v~a~d~~tG~----~~----W~~~~~----~~~s~p~~~-~g~~~v~~--s~d---g~l~a 63 (369)
T 2hz6_A 4 TVTL--PETLLFVSTLDGSLHAVSKRTGS----IK----WTLKED----PVLQVPTHV-EEPAFLPD--PND---GSLYT 63 (369)
T ss_dssp ------CTTEEEEEETTSEEEEEETTTCC----EE----EEEECC----CSCCCC------CCEEEC--TTT---CCEEE
T ss_pred CCee--eCCEEEEEcCCCEEEEEECCCCC----EE----EEecCC----CceecceEc-CCCEEEEe--CCC---CEEEE
Confidence 3455 34567777678999999976676 12 211111 111111222 56677742 111 35999
Q ss_pred EECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccC-CcEEEEecCCccccccccccccccCeEE
Q 039428 133 YDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVE-GQLLSIIRSPLFTAKEWYKNVFGLNGIV 211 (335)
Q Consensus 133 ~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~p~Gia 211 (335)
+|.++|+.++......+. .. ....++..++.+|+. +..+.|+.+|++ |+....+ .. .....
T Consensus 64 ~d~~tG~~~w~~~~~~~~--~~-~~sp~~~~~~~v~~g-~~dg~v~a~D~~tG~~~w~~-----~~---------~~~~~ 125 (369)
T 2hz6_A 64 LGSKNNEGLTKLPFTIPE--LV-QASPCRSSDGILYMG-KKQDIWYVIDLLTGEKQQTL-----SS---------AFADS 125 (369)
T ss_dssp C-----CCSEECSCCHHH--HH-TTCSCC-----CCCC-EEEEEEEEECCC-----------------------------
T ss_pred EECCCCceeeeeeccCcc--cc-ccCceEecCCEEEEE-eCCCEEEEEECCCCcEEEEe-----cC---------CCccc
Confidence 999888765444331110 00 011122235677764 345789999987 5443311 11 11123
Q ss_pred EccCC-eEEEEECCCCEEEEEeCCCCc
Q 039428 212 YHPDG-FLIVIHMCSGNLFKIDIRKEE 237 (335)
Q Consensus 212 ~~~dg-~Lyvad~~~~~v~~~d~~~~~ 237 (335)
.+|++ .+|++. .++.|+.+|+.+++
T Consensus 126 ~~p~~~~v~~~~-~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 126 LSPSTSLLYLGR-TEYTITMYDTKTRE 151 (369)
T ss_dssp -------EEEEE-EEEEEECCCSSSSS
T ss_pred ccccCCEEEEEe-cCCEEEEEECCCCC
Confidence 34454 777764 46789999987763
No 327
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.30 E-value=0.1 Score=52.24 Aligned_cols=140 Identities=9% Similarity=0.049 Sum_probs=81.2
Q ss_pred cceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCc-EEEE-eC-------C
Q 039428 103 TMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGN-AYVT-DV-------V 173 (335)
Q Consensus 103 p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~-d~-------~ 173 (335)
...+...+ ++.+++. .| ..|..||.++++............-....++++++|||+ ++++ +. .
T Consensus 19 ~~~~~w~~-dg~~~~~-~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 19 LYSLRWIS-DHEYLYK-QE------NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCEEECS-SSEEEEE-ET------TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred ccccEECC-CCcEEEE-cC------CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 35778886 6666653 22 359999999887654333211111011235688999997 3333 21 1
Q ss_pred CCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccCC-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcC--
Q 039428 174 SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSS-- 250 (335)
Q Consensus 174 ~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~-- 250 (335)
.+.++.+|.+++..+.+ .. ........+++||| .|.++ .++.|+..+..++ ....+...+...
T Consensus 91 ~~~~~~~d~~~~~~~~l-----~~-----~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~~~--~~~~lt~~g~~~~~ 156 (740)
T 4a5s_A 91 TASYDIYDLNKRQLITE-----ER-----IPNNTQWVTWSPVGHKLAYV--WNNDIYVKIEPNL--PSYRITWTGKEDII 156 (740)
T ss_dssp EEEEEEEETTTTEECCS-----SC-----CCTTEEEEEECSSTTCEEEE--ETTEEEEESSTTS--CCEECCSCCBTTTE
T ss_pred ceEEEEEECCCCcEEEc-----cc-----CCCcceeeEECCCCCEEEEE--ECCeEEEEECCCC--ceEEEcCCCCccce
Confidence 26788999887665422 11 01125678999999 66555 3468999998876 333332222110
Q ss_pred -------------CCCCCeEEEcCCCc
Q 039428 251 -------------LSLGDGLALLSPTK 264 (335)
Q Consensus 251 -------------~~~pdGia~d~~g~ 264 (335)
+....++++.|||+
T Consensus 157 ~~g~~~~v~~ee~~~~~~~~~wSpDg~ 183 (740)
T 4a5s_A 157 YNGITDWVYEEEVFSAYSALWWSPNGT 183 (740)
T ss_dssp EESBCCHHHHHHTSSSSBCEEECTTSS
T ss_pred ecCcccccccchhcCCCcceEECCCCC
Confidence 12234688999986
No 328
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.28 E-value=0.59 Score=41.92 Aligned_cols=223 Identities=14% Similarity=0.067 Sum_probs=113.8
Q ss_pred CCCEEEEE-ecCCeEEEEECCCCCCCcceeeeeEEeecCCcC--CCCcceEEEeCCCCeEEEEEec-C--C--CCccceE
Q 039428 59 VGRRFLVS-FLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVV--GNATMGIAVDRPRNRLLVAFTD-V--L--GNKYSAL 130 (335)
Q Consensus 59 ~g~~~~~~-~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~--~~~p~Gi~~d~~~g~l~v~~~D-~--~--~~~~~~v 130 (335)
++.+|++. ...+.++++|...... .|...+.+. ...-+++++. ++.|||..+. . . ....+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~--------~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v 88 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDK--------KWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDV 88 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSC--------CEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCC--------CeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccE
Confidence 56677777 5567899999642110 133333222 1233556655 6889996322 0 0 0112469
Q ss_pred EEEECCCCeEEEEeecCCCccCCCCCC-ceeECCCCcEEEEeCC------------------------------------
Q 039428 131 AAYDLSTWKRLFLTQLSGKSEEKSTAD-DIAVDAEGNAYVTDVV------------------------------------ 173 (335)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~~~~~p~-~~~vd~~G~lyV~d~~------------------------------------ 173 (335)
++||+.+++-....... + ..+.. .+++ -++++||....
T Consensus 89 ~~yd~~~~~W~~~~~~~-p---~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (357)
T 2uvk_A 89 HKYNPKTNSWVKLMSHA-P---MGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAED 163 (357)
T ss_dssp EEEETTTTEEEECSCCC-S---SCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGG
T ss_pred EEEeCCCCcEEECCCCC-C---cccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccc
Confidence 99999988654332221 1 11222 2333 57889997643
Q ss_pred ---CCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccCCeEEEEEC------CCCEEEEEeCCCCceeEEEEe
Q 039428 174 ---SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHM------CSGNLFKIDIRKEEEEVKLIE 244 (335)
Q Consensus 174 ---~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~------~~~~v~~~d~~~~~~~~~~~~ 244 (335)
...++++|+....-+.+.. +.. ....-.++++. ++.||+.-. ....+++++++........+.
T Consensus 164 ~~~~~~v~~yd~~~~~W~~~~~--~p~-----~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~ 235 (357)
T 2uvk_A 164 YFFNKFLLSFDPSTQQWSYAGE--SPW-----YGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLA 235 (357)
T ss_dssp GCCCCEEEEEETTTTEEEEEEE--CSS-----CCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECC
T ss_pred cCCcccEEEEeCCCCcEEECCC--CCC-----CCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecC
Confidence 3689999998654332211 110 01112455554 678887632 145688888733210333332
Q ss_pred ccCCcCCCCCC---e-EEEcCCCcEEEEecCC----------------------CeEEEEEcCCC-cEEEEEeeeecCCC
Q 039428 245 LRGGSSLSLGD---G-LALLSPTKLVVAGNPY----------------------PSARLVESSDG-WETASVVAKFNGPT 297 (335)
Q Consensus 245 ~~g~~~~~~pd---G-ia~d~~g~l~va~~~~----------------------~~~~v~~~~~~-~~~~~~~~~~~~p~ 297 (335)
. +..|. + .+...++.+||.+... +.+.+++...+ |+.. ..+..|.
T Consensus 236 --~---~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r 307 (357)
T 2uvk_A 236 --P---VSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS---GELSQGR 307 (357)
T ss_dssp --C---SSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEE---EECSSCC
T ss_pred --C---CCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeC---CCCCCCc
Confidence 1 11221 2 1333467899984310 23566776554 7643 3333333
Q ss_pred CCcceEEEEeCCeEEEE
Q 039428 298 HRVATAATVKDGRVYLS 314 (335)
Q Consensus 298 ~~~Pt~va~~~g~lyV~ 314 (335)
.. .+++.-+++|||.
T Consensus 308 ~~--~~~~~~~~~i~v~ 322 (357)
T 2uvk_A 308 AY--GVSLPWNNSLLII 322 (357)
T ss_dssp BS--SEEEEETTEEEEE
T ss_pred cc--ceeEEeCCEEEEE
Confidence 22 3455568999983
No 329
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.08 E-value=0.77 Score=45.56 Aligned_cols=197 Identities=15% Similarity=0.134 Sum_probs=98.0
Q ss_pred eeeEEcCCCCEEEEE-ecC------------CeEEEEECCCCCCCcceeeeeEEeecCC-cCCCCcceEEEeCCCCeEEE
Q 039428 52 ETAKWDDVGRRFLVS-FLD------------GGVGQVLVPDEYSPGTVLEEVKLVKEDD-VVGNATMGIAVDRPRNRLLV 117 (335)
Q Consensus 52 egia~d~~g~~~~~~-~~~------------~~I~~~d~~~g~~~~~v~~~~~~~~~~~-~~~~~p~Gi~~d~~~g~l~v 117 (335)
.+++|. ||+.++.+ ... .+|++++..++.. +...+...+. .. ....++.+++++..|++
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~-----~~~~v~~~~~~~~-~~~~~~~~SpDg~~l~~ 250 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQE-----DDRLVFGAIPAQH-HRYVGATVTEDDRFLLI 250 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGG-----GCEEEESCSGGGC-CSEEEEEECTTSCEEEE
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcc-----cceEEEecCCCCC-eEEEEEEEcCCCCEEEE
Confidence 467999 88755555 331 3588887543321 1111222222 11 12357788874445555
Q ss_pred EEecCCCCccceEEEEECCCC--eEEEEeecCCCccCCCCCCceeECCCC-cEEEEeC---CCCeEEEEccCCcE----E
Q 039428 118 AFTDVLGNKYSALAAYDLSTW--KRLFLTQLSGKSEEKSTADDIAVDAEG-NAYVTDV---VSSKIWKVGVEGQL----L 187 (335)
Q Consensus 118 ~~~D~~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~p~~~~vd~~G-~lyV~d~---~~~~I~~~d~~g~~----~ 187 (335)
........ +.|+.+|.+++ +....... ...-... ++++| .+|+... .+.+|++++.++.. .
T Consensus 251 ~~~~~~~~--~~i~~~d~~~~~~~~~~l~~~------~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~ 321 (693)
T 3iuj_A 251 SAANSTSG--NRLYVKDLSQENAPLLTVQGD------LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWR 321 (693)
T ss_dssp EEESSSSC--CEEEEEETTSTTCCCEEEECS------SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCE
T ss_pred EEccCCCC--cEEEEEECCCCCCceEEEeCC------CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccE
Confidence 43322111 47999998765 33322111 1111111 45554 5666532 25799999987532 1
Q ss_pred EEecCCccccccccccccccCeEEEccCC-eEEEEECCCC--EEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCC-
Q 039428 188 SIIRSPLFTAKEWYKNVFGLNGIVYHPDG-FLIVIHMCSG--NLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPT- 263 (335)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~p~Gia~~~dg-~Lyvad~~~~--~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g- 263 (335)
.++.. . ..-+.+++++ +|+++...++ +|++++++++ ..+.+..++. ....++..++++
T Consensus 322 ~l~~~----~---------~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~--~~~~l~~p~~---~~~~~~~~~~d~~ 383 (693)
T 3iuj_A 322 DLIPE----R---------QQVLTVHSGSGYLFAEYMVDATARVEQFDYEGK--RVREVALPGL---GSVSGFNGKHDDP 383 (693)
T ss_dssp EEECC----C---------SSCEEEEEETTEEEEEEEETTEEEEEEECTTSC--EEEEECCSSS---SEEEECCCCTTCS
T ss_pred EEecC----C---------CCEEEEEEECCEEEEEEEECCeeEEEEEECCCC--eeEEeecCCC---ceEEeeecCCCCC
Confidence 21110 0 1112677766 7776655554 7999999876 5555554321 112234444454
Q ss_pred cEEEEec---CCCeEEEEEcCC
Q 039428 264 KLVVAGN---PYPSARLVESSD 282 (335)
Q Consensus 264 ~l~va~~---~~~~~~v~~~~~ 282 (335)
.+++... ....+..++...
T Consensus 384 ~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 384 ALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp CEEEEEECSSSCCEEEEECTTT
T ss_pred EEEEEecCCCCCCEEEEEECCC
Confidence 4665522 113455555433
No 330
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.91 E-value=0.79 Score=40.08 Aligned_cols=199 Identities=9% Similarity=0.018 Sum_probs=106.7
Q ss_pred CCCEEEEEec----CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecC-CCCccceEEEE
Q 039428 59 VGRRFLVSFL----DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDV-LGNKYSALAAY 133 (335)
Q Consensus 59 ~g~~~~~~~~----~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~-~~~~~~~v~~~ 133 (335)
++.+|++... .+.++++|+.+.++ .+ ....|. ...-+.+++. ++.||+..+-. .....+.+.+|
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W-----~~--~~~~p~--~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 123 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSW-----YS--KLGPPT--PRDSLAACAA--EGKIYTSGGSEVGNSALYLFECY 123 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEE-----EE--EECCSS--CCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeE-----EE--CCCCCc--cccceeEEEE--CCEEEEECCCCCCCcEeeeEEEE
Confidence 5566666632 36899999654431 11 211121 1233455554 68899964321 11112469999
Q ss_pred ECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCC---------CCeEEEEccCCcEEEEecCCccccccccccc
Q 039428 134 DLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV---------SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNV 204 (335)
Q Consensus 134 d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~---------~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~ 204 (335)
|+.+++-......+.+ ... ..+++ -++++||.... ...++++|+....-..+.. +. ..
T Consensus 124 d~~~~~W~~~~~~p~~---r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~--~p------~~ 190 (306)
T 3ii7_A 124 DTRTESWHTKPSMLTQ---RCS-HGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCP--MI------EA 190 (306)
T ss_dssp ETTTTEEEEECCCSSC---CBS-CEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECC--CS------SC
T ss_pred eCCCCceEeCCCCcCC---cce-eEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCC--cc------ch
Confidence 9998865543333211 111 12222 36789997431 5679999998665443321 11 11
Q ss_pred cccCeEEEccCCeEEEEECC-----CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEec-----CCCe
Q 039428 205 FGLNGIVYHPDGFLIVIHMC-----SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGN-----PYPS 274 (335)
Q Consensus 205 ~~p~Gia~~~dg~Lyvad~~-----~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~-----~~~~ 274 (335)
..-.++++. ++.||+.-.. .+.++++|+... ..+.+...... ..-..+++. ++.+|+.+. ..+.
T Consensus 191 r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~--r~~~~~~~~-~~~i~v~GG~~~~~~~~~ 264 (306)
T 3ii7_A 191 RKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLN--EWKMVSPMPWK--GVTVKCAAV-GSIVYVLAGFQGVGRLGH 264 (306)
T ss_dssp CBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTT--EEEECCCCSCC--BSCCEEEEE-TTEEEEEECBCSSSBCCE
T ss_pred hhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCC--cEEECCCCCCC--ccceeEEEE-CCEEEEEeCcCCCeeeee
Confidence 223444444 6788887322 357999999887 45444311100 112234443 678999843 2356
Q ss_pred EEEEEcCCC-cEEE
Q 039428 275 ARLVESSDG-WETA 287 (335)
Q Consensus 275 ~~v~~~~~~-~~~~ 287 (335)
+.+++...+ |+..
T Consensus 265 ~~~yd~~~~~W~~~ 278 (306)
T 3ii7_A 265 ILEYNTETDKWVAN 278 (306)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEcCCCCeEEeC
Confidence 777887665 7654
No 331
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.86 E-value=0.92 Score=40.45 Aligned_cols=186 Identities=9% Similarity=0.010 Sum_probs=102.7
Q ss_pred ceeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCC-cCCCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 50 LCETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDD-VVGNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 50 ~pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~-~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
...++++.++++.|++. ..+.|++-.. .|+. .+ .+..+. .......+|.+++ +++|++. +. .
T Consensus 37 ~~~~v~~~~~~~~~~~G-~~g~i~~s~D-gG~t----W~---~~~~~~~~~~~~~~~i~~~~--~~~~~~g-~~-----g 99 (327)
T 2xbg_A 37 TILDMSFIDRHHGWLVG-VNATLMETRD-GGQT----WE---PRTLVLDHSDYRFNSVSFQG--NEGWIVG-EP-----P 99 (327)
T ss_dssp CEEEEEESSSSCEEEEE-TTTEEEEESS-TTSS----CE---ECCCCCSCCCCEEEEEEEET--TEEEEEE-ET-----T
T ss_pred cEEEEEECCCCcEEEEc-CCCeEEEeCC-CCCC----Ce---ECCCCCCCCCccEEEEEecC--CeEEEEE-CC-----C
Confidence 46788888777777755 4677888753 3431 11 111111 0112357888884 7888863 22 2
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccccccC
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLN 208 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~ 208 (335)
.|++ ..++|+.......... . ...+..+++.+++++|++.. .+.|++-+-.|+.-.....+ ......
T Consensus 100 ~i~~-S~DgG~tW~~~~~~~~-~-~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW~~~~~~---------~~~~~~ 166 (327)
T 2xbg_A 100 IMLH-TTDGGQSWSQIPLDPK-L-PGSPRLIKALGNGSAEMITN-VGAIYRTKDSGKNWQALVQE---------AIGVMR 166 (327)
T ss_dssp EEEE-ESSTTSSCEECCCCTT-C-SSCEEEEEEEETTEEEEEET-TCCEEEESSTTSSEEEEECS---------CCCCEE
T ss_pred eEEE-ECCCCCCceECccccC-C-CCCeEEEEEECCCCEEEEeC-CccEEEEcCCCCCCEEeecC---------CCcceE
Confidence 4655 4455543222221100 0 12356788777888888764 56788765555433222111 011356
Q ss_pred eEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEec
Q 039428 209 GIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGN 270 (335)
Q Consensus 209 Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~ 270 (335)
++++++++.+|+.. ..+.+++-+-.+++ ..+.+.... -.....+++++++++|++..
T Consensus 167 ~~~~~~~~~~~~~g-~~G~~~~S~d~gG~-tW~~~~~~~---~~~~~~~~~~~~g~~~~~~~ 223 (327)
T 2xbg_A 167 NLNRSPSGEYVAVS-SRGSFYSTWEPGQT-AWEPHNRTT---SRRLHNMGFTPDGRLWMIVN 223 (327)
T ss_dssp EEEECTTSCEEEEE-TTSSEEEEECTTCS-SCEEEECCS---SSCEEEEEECTTSCEEEEET
T ss_pred EEEEcCCCcEEEEE-CCCcEEEEeCCCCC-ceeECCCCC---CCccceeEECCCCCEEEEeC
Confidence 78999888777655 35667776543222 444443221 12356788888999998865
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.68 E-value=1 Score=39.62 Aligned_cols=211 Identities=14% Similarity=0.055 Sum_probs=108.2
Q ss_pred CCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEec-----CCCC-ccceEEEEECCCCeEEE
Q 039428 69 DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTD-----VLGN-KYSALAAYDLSTWKRLF 142 (335)
Q Consensus 69 ~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D-----~~~~-~~~~v~~~d~~~~~~~~ 142 (335)
...++.+|+.+.++ . ....+......-+++++. ++.||+...- .... ..+.+++||+.+++-..
T Consensus 12 G~~~~~yd~~~~~W-----~---~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 12 EEGAVAYDPAANEC-----Y---CASLSSQVPKNHVSLVTK--ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp TTEEEEEETTTTEE-----E---EEECCCCSCSSEEEEECT--TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE
T ss_pred CCceEEECCCCCeE-----e---cCCCCCCCCccceEEEEE--CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE
Confidence 36899999654431 1 112221111223444443 7889987541 1111 11348999999886543
Q ss_pred EeecCCCccCCCCCCceeECCCCcEEEEeC--------CCCeEEEEccCCcEEEEecCCccccccccccccccCeEEEcc
Q 039428 143 LTQLSGKSEEKSTADDIAVDAEGNAYVTDV--------VSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHP 214 (335)
Q Consensus 143 ~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~--------~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~ 214 (335)
..+.+.+ ... ..+++ -++.+||... ....++++|+....-+.+.. +. ....-...+. -
T Consensus 82 ~~~~p~~---r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~--~p------~~r~~~~~~~-~ 147 (315)
T 4asc_A 82 MPPLPSP---RCL-FGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP--LP------YVVYGHTVLS-H 147 (315)
T ss_dssp CCCBSSC---EES-CEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC--CS------SCCBSCEEEE-E
T ss_pred CCCCCcc---hhc-eeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC--CC------CcccceeEEE-E
Confidence 3222111 111 22333 2678999743 13679999998654332211 11 1122334444 3
Q ss_pred CCeEEEEECC------CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecC-----CCeEEEEEcCCC
Q 039428 215 DGFLIVIHMC------SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNP-----YPSARLVESSDG 283 (335)
Q Consensus 215 dg~Lyvad~~------~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~-----~~~~~v~~~~~~ 283 (335)
++.||+.-.. .+.++++|+... ..+.+...... .. -..+++. ++++|+.+.. .+.+.+++...+
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~-r~-~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKF--EWKELAPMQTA-RS-LFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTT--EEEECCCCSSC-CB-SCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCC--eEEECCCCCCc-hh-ceEEEEE-CCEEEEEeccCCCCccceEEEEECCCC
Confidence 7789887543 357999999887 44444311100 01 1233333 5789998431 124666766555
Q ss_pred -cEEEEEeeeecCCCCCcceEEEEeCCeEEE
Q 039428 284 -WETASVVAKFNGPTHRVATAATVKDGRVYL 313 (335)
Q Consensus 284 -~~~~~~~~~~~~p~~~~Pt~va~~~g~lyV 313 (335)
|... .....|. .-.+++.-+++|||
T Consensus 223 ~W~~~---~~~p~~r--~~~~~~~~~~~l~v 248 (315)
T 4asc_A 223 KWAPF---EAFPQER--SSLSLVSLVGTLYA 248 (315)
T ss_dssp EEEEE---CCCSSCC--BSCEEEEETTEEEE
T ss_pred eEEEC---CCCCCcc--cceeEEEECCEEEE
Confidence 6543 2222222 22345556889998
No 333
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.65 E-value=1 Score=39.31 Aligned_cols=197 Identities=14% Similarity=0.111 Sum_probs=106.1
Q ss_pred CCCEEEEEec-----CCeEEEEECCCCCCCcceeeeeEEeecCCcC-CCCcceEEEeCCCCeEEEEEecCCCCccceEEE
Q 039428 59 VGRRFLVSFL-----DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVV-GNATMGIAVDRPRNRLLVAFTDVLGNKYSALAA 132 (335)
Q Consensus 59 ~g~~~~~~~~-----~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~-~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~ 132 (335)
++.+|++... .+.++++|+.+.+ |...+.+. ....+++++. ++.||+...-......+.+.+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~----------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 128 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQ----------WTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEA 128 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTE----------EEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCc----------eeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEE
Confidence 5566666532 2569999964333 22222221 1233566665 688999743222222246899
Q ss_pred EECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCC-------CCeEEEEccCCcEEEEecCCcccccccccccc
Q 039428 133 YDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV-------SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVF 205 (335)
Q Consensus 133 ~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~-------~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~ 205 (335)
||+.+++-....+.+.+ ... ..+++ -++++|+.... ...++++|+....-..+.. +. ...
T Consensus 129 ~d~~~~~W~~~~~~p~~---r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~--~p------~~r 195 (302)
T 2xn4_A 129 YNIKSNEWFHVAPMNTR---RSS-VGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAE--MS------TRR 195 (302)
T ss_dssp EETTTTEEEEECCCSSC---CBS-CEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECC--CS------SCC
T ss_pred EeCCCCeEeecCCCCCc---ccC-ceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCC--Cc------ccc
Confidence 99998866544333211 111 22332 36789997432 4579999998654433221 11 111
Q ss_pred ccCeEEEccCCeEEEEECC-----CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecC-----CCeE
Q 039428 206 GLNGIVYHPDGFLIVIHMC-----SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNP-----YPSA 275 (335)
Q Consensus 206 ~p~Gia~~~dg~Lyvad~~-----~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~-----~~~~ 275 (335)
.-.+++.. ++.||+.-.. .+.++++|+... ....+...... ..-.++++. ++.+|+.+.. .+.+
T Consensus 196 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~--r~~~~~~~~-~~~i~v~GG~~~~~~~~~v 269 (302)
T 2xn4_A 196 SGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTN--AWRQVADMNMC--RRNAGVCAV-NGLLYVVGGDDGSCNLASV 269 (302)
T ss_dssp BSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTT--EEEEECCCSSC--CBSCEEEEE-TTEEEEECCBCSSSBCCCE
T ss_pred ccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCC--CEeeCCCCCCc--cccCeEEEE-CCEEEEECCcCCCcccccE
Confidence 22344444 6788887432 357999999887 55555321100 112234443 6789998431 2457
Q ss_pred EEEEcCCC-cEE
Q 039428 276 RLVESSDG-WET 286 (335)
Q Consensus 276 ~v~~~~~~-~~~ 286 (335)
.+++...+ |..
T Consensus 270 ~~yd~~~~~W~~ 281 (302)
T 2xn4_A 270 EYYNPTTDKWTV 281 (302)
T ss_dssp EEEETTTTEEEE
T ss_pred EEEcCCCCeEEE
Confidence 77776655 653
No 334
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.58 E-value=0.71 Score=42.22 Aligned_cols=162 Identities=11% Similarity=0.030 Sum_probs=82.5
Q ss_pred CCcceEEEeC-CCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCC--Ccc-------CCCCCCceeECC---CCcE
Q 039428 101 NATMGIAVDR-PRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSG--KSE-------EKSTADDIAVDA---EGNA 167 (335)
Q Consensus 101 ~~p~Gi~~d~-~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~-------~~~~p~~~~vd~---~G~l 167 (335)
.....|++|+ +.++||++... ++....|++.+- .++......... +.. .......+++|+ .+++
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~--g~~g~gl~~s~D-~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l 131 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAART--GHLGPTVFRSDD-GGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTW 131 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC----CCEEEEEESS-TTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCE
T ss_pred CceEEEEECCCCCCeEEEEecC--CCCCccEEEeCC-CCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEE
Confidence 4578999996 35789997432 111024777653 332211111100 000 001233578886 5789
Q ss_pred EEEeCCCCeEEEEccCCcEEEEecCCccccccc----------cccccccCeEEEccC--CeEEEEECCCCEEEEEeCCC
Q 039428 168 YVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEW----------YKNVFGLNGIVYHPD--GFLIVIHMCSGNLFKIDIRK 235 (335)
Q Consensus 168 yV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~----------~~~~~~p~Gia~~~d--g~Lyvad~~~~~v~~~d~~~ 235 (335)
|+... .+.|++.+..|+.-+.+.. ....|.. .........|+++|. +.||++... +.|++.+-.+
T Consensus 132 ~~g~~-~ggl~~S~DgG~tW~~~~~-~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-ggl~~s~DgG 208 (394)
T 3b7f_A 132 YAGTS-PQGLFRSTDHGASWEPVAG-FNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-GGVFESTDAG 208 (394)
T ss_dssp EEEEE-TTEEEEESSTTSBCEECHH-HHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-BEEEEESSTT
T ss_pred EEEec-CCcEEEEcCCCCCeEECcC-ccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-CCEEEECCCC
Confidence 98643 4689999877754332210 0000000 001122457899873 489988643 4588876554
Q ss_pred CceeEEEEeccCC-cCC--------CCCCeEEEcCC--CcEEEEec
Q 039428 236 EEEEVKLIELRGG-SSL--------SLGDGLALLSP--TKLVVAGN 270 (335)
Q Consensus 236 ~~~~~~~~~~~g~-~~~--------~~pdGia~d~~--g~l~va~~ 270 (335)
. ..+.+..... ..+ .....|+++++ +.+|++..
T Consensus 209 ~--tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~ 252 (394)
T 3b7f_A 209 T--DWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH 252 (394)
T ss_dssp S--SCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET
T ss_pred C--CceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC
Confidence 4 4444421100 001 11346788876 78999865
No 335
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.53 E-value=1.1 Score=39.18 Aligned_cols=197 Identities=9% Similarity=0.039 Sum_probs=105.4
Q ss_pred CCCEEEEEec---------CCeEEEEECCCCCCCcceeeeeEEeecCCcC-CCCcceEEEeCCCCeEEEEEecCCCCccc
Q 039428 59 VGRRFLVSFL---------DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVV-GNATMGIAVDRPRNRLLVAFTDVLGNKYS 128 (335)
Q Consensus 59 ~g~~~~~~~~---------~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~-~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~ 128 (335)
++.+|++... .+.++++|+.+.+ |...+.+. ...-.++++. ++.||+...-......+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~----------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 137 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ----------WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHN 137 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTE----------EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECC
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCe----------EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccc
Confidence 5667776522 2579999964333 32222221 1233455554 68899963211111124
Q ss_pred eEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCC-----CCeEEEEccCCcEEEEecCCcccccccccc
Q 039428 129 ALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV-----SSKIWKVGVEGQLLSIIRSPLFTAKEWYKN 203 (335)
Q Consensus 129 ~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~-----~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~ 203 (335)
.+.+||+.+++-....+.+.+ ... ..+++. ++.+|+.... ...++++|+....-..+.. +. .
T Consensus 138 ~~~~yd~~~~~W~~~~~~p~~---r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~--~p------~ 204 (308)
T 1zgk_A 138 SVERYEPERDEWHLVAPMLTR---RIG-VGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITA--MN------T 204 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSC---CBS-CEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCC--CS------S
T ss_pred cEEEECCCCCeEeECCCCCcc---ccc-eEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCC--CC------C
Confidence 599999998865533332211 112 223332 6789997432 4679999998665443221 11 1
Q ss_pred ccccCeEEEccCCeEEEEECC-----CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEec-----CCC
Q 039428 204 VFGLNGIVYHPDGFLIVIHMC-----SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGN-----PYP 273 (335)
Q Consensus 204 ~~~p~Gia~~~dg~Lyvad~~-----~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~-----~~~ 273 (335)
...-.++++. ++.||+.-.. .+.++++|+... ....+.... . ...-.++++. ++.+|+.+. ..+
T Consensus 205 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p-~-~r~~~~~~~~-~~~i~v~GG~~~~~~~~ 278 (308)
T 1zgk_A 205 IRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETE--TWTFVAPMK-H-RRSALGITVH-QGRIYVLGGYDGHTFLD 278 (308)
T ss_dssp CCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT--EEEECCCCS-S-CCBSCEEEEE-TTEEEEECCBCSSCBCC
T ss_pred ccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCC--cEEECCCCC-C-CccceEEEEE-CCEEEEEcCcCCCcccc
Confidence 1123344444 7788887533 367999999987 454443111 0 0112244443 578999843 124
Q ss_pred eEEEEEcCCC-cEE
Q 039428 274 SARLVESSDG-WET 286 (335)
Q Consensus 274 ~~~v~~~~~~-~~~ 286 (335)
.+.+++...+ |..
T Consensus 279 ~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 279 SVECYDPDTDTWSE 292 (308)
T ss_dssp EEEEEETTTTEEEE
T ss_pred eEEEEcCCCCEEee
Confidence 5777777655 764
No 336
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.14 E-value=0.029 Score=54.15 Aligned_cols=116 Identities=10% Similarity=0.062 Sum_probs=75.5
Q ss_pred CCCCCceeECCCCc-EEEEeCCCCeEEEEccCCcEEEEecCCcccc----ccccccccccCeEEEccCCeEEEEECCCCE
Q 039428 153 KSTADDIAVDAEGN-AYVTDVVSSKIWKVGVEGQLLSIIRSPLFTA----KEWYKNVFGLNGIVYHPDGFLIVIHMCSGN 227 (335)
Q Consensus 153 ~~~p~~~~vd~~G~-lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~----~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~ 227 (335)
...|.|+-++|||+ +++++....++.++|.+. ....+.+..+.. -...+.+.+|--.+||++|+.|.+-.-..+
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k-~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDK-LPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGG-HHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeeh-hhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecce
Confidence 57899999999996 888888899999888652 111111100000 001234568999999999999999999999
Q ss_pred EEEEeCCCC-------c--eeEEEEeccC--CcCCCCCCeEEEcCCCcEEEEec
Q 039428 228 LFKIDIRKE-------E--EEVKLIELRG--GSSLSLGDGLALLSPTKLVVAGN 270 (335)
Q Consensus 228 v~~~d~~~~-------~--~~~~~~~~~g--~~~~~~pdGia~d~~g~l~va~~ 270 (335)
|.+.+++.. + ..+..+++.= ++ +..+.|=+.+++|+++++-+
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH-~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGH-LHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEE-EEETTTTSTTCCSCEEEEEE
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccccCCcc-cccCCCccCCCCccEEEEec
Confidence 999887642 1 1444454311 01 12345556678898888843
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.99 E-value=2 Score=42.76 Aligned_cols=196 Identities=10% Similarity=-0.044 Sum_probs=100.4
Q ss_pred eeeEEcC-CCCEEEEEe-c-----CCeEEEEECCCCCCCcceeeeeEEeecCCcC-CCCcceEEEeCCCCeEEEEEecCC
Q 039428 52 ETAKWDD-VGRRFLVSF-L-----DGGVGQVLVPDEYSPGTVLEEVKLVKEDDVV-GNATMGIAVDRPRNRLLVAFTDVL 123 (335)
Q Consensus 52 egia~d~-~g~~~~~~~-~-----~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~-~~~p~Gi~~d~~~g~l~v~~~D~~ 123 (335)
.+.+... ++.+|+++. . .+.++++|+.+.+ |...+.+. ...-+..++-. ++.|||..+ ..
T Consensus 443 hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~----------W~~~~~~p~~R~~h~~~~~~-~~~iyv~GG-~~ 510 (695)
T 2zwa_A 443 HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTRE----------WSMIKSLSHTRFRHSACSLP-DGNVLILGG-VT 510 (695)
T ss_dssp CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTE----------EEECCCCSBCCBSCEEEECT-TSCEEEECC-BC
T ss_pred eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCc----------EEECCCCCCCcccceEEEEc-CCEEEEECC-CC
Confidence 3444444 677777763 2 2468999864333 32222221 12335555532 688999632 11
Q ss_pred CCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCC-CcEEEEeCC-------CCeEEEEccCCcE------EEE
Q 039428 124 GNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAE-GNAYVTDVV-------SSKIWKVGVEGQL------LSI 189 (335)
Q Consensus 124 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~-G~lyV~d~~-------~~~I~~~d~~g~~------~~~ 189 (335)
.. ..+.+||+.++.-...........+......++++.+ |.+||.... .+.++++|+.... -..
T Consensus 511 ~~--~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~ 588 (695)
T 2zwa_A 511 EG--PAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIK 588 (695)
T ss_dssp SS--CSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEE
T ss_pred CC--CCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEE
Confidence 11 1599999998865432211000111222233555665 889998643 3679999987654 121
Q ss_pred ecCCccccccccccccccCeEEEccCCeEEEEEC--------CCCEEEEEeCCCCceeEEEEeccCCc-----CCCCCCe
Q 039428 190 IRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHM--------CSGNLFKIDIRKEEEEVKLIELRGGS-----SLSLGDG 256 (335)
Q Consensus 190 ~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~--------~~~~v~~~d~~~~~~~~~~~~~~g~~-----~~~~pdG 256 (335)
+.. .| +....-.+++...++.||+.-. ..+.++++|+... ....+.++... +...-.+
T Consensus 589 ~~~----~p---~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~--~W~~~~~p~~~~~~~~p~~~gh~ 659 (695)
T 2zwa_A 589 KLQ----HP---LFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE--TLTSIPISRRIWEDHSLMLAGFS 659 (695)
T ss_dssp EEE----CG---GGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTT--EEEECCCCHHHHHHSCCCCSSCE
T ss_pred cCC----CC---CCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCC--eEEEeeccccccCCCCccceeee
Confidence 111 00 0112234555554588888643 2467999999987 55543322100 0111134
Q ss_pred EEEcCCCcEEEEec
Q 039428 257 LALLSPTKLVVAGN 270 (335)
Q Consensus 257 ia~d~~g~l~va~~ 270 (335)
++...+|.+||.+.
T Consensus 660 ~~~~~~g~i~v~GG 673 (695)
T 2zwa_A 660 LVSTSMGTIHIIGG 673 (695)
T ss_dssp EECC---CEEEECC
T ss_pred EEEeCCCEEEEEeC
Confidence 55555568888854
No 338
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=94.79 E-value=0.025 Score=51.89 Aligned_cols=140 Identities=16% Similarity=0.178 Sum_probs=63.1
Q ss_pred CCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccC-CcEEEEe
Q 039428 112 RNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVE-GQLLSII 190 (335)
Q Consensus 112 ~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~-g~~~~~~ 190 (335)
++.+|+...| +.|+.+|.++|+.++.... .+ .....+-.+|++|++.+..+.|+.+|.+ |+....+
T Consensus 9 ~~~v~~gs~d------g~v~a~d~~tG~~~W~~~~-~~------~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 9 ETLLFVSTLD------GSLHAVSKRTGSIKWTLKE-DP------VLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp TTEEEEEETT------SEEEEEETTTCCEEEEEEC-CC------SCCCC-----CCEEECTTTCCEEEC-----CCSEEC
T ss_pred CCEEEEEcCC------CEEEEEECCCCCEEEEecC-CC------ceecceEcCCCEEEEeCCCCEEEEEECCCCceeeee
Confidence 6899996443 3599999999998876654 11 1112233567788887888999999984 5543322
Q ss_pred cCCccccccccccccccCeEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEc-CCCcEEEEe
Q 039428 191 RSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALL-SPTKLVVAG 269 (335)
Q Consensus 191 ~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d-~~g~l~va~ 269 (335)
. +..+. .. ....+++.++.||++. .+++|+.+|+..++ ....+...+ ..... .++.+|++.
T Consensus 76 ~---~~~~~----~~-~~sp~~~~~~~v~~g~-~dg~v~a~D~~tG~-~~w~~~~~~--------~~~~~p~~~~v~~~~ 137 (369)
T 2hz6_A 76 P---FTIPE----LV-QASPCRSSDGILYMGK-KQDIWYVIDLLTGE-KQQTLSSAF--------ADSLSPSTSLLYLGR 137 (369)
T ss_dssp S---CCHHH----HH-TTCSCC-----CCCCE-EEEEEEEECCC-------------------------------EEEEE
T ss_pred e---ccCcc----cc-ccCceEecCCEEEEEe-CCCEEEEEECCCCc-EEEEecCCC--------cccccccCCEEEEEe
Confidence 1 11110 00 0111222355777654 45789999988763 332332211 11112 235677764
Q ss_pred cCCCeEEEEEcCCC
Q 039428 270 NPYPSARLVESSDG 283 (335)
Q Consensus 270 ~~~~~~~v~~~~~~ 283 (335)
.. +.+..++...+
T Consensus 138 ~d-g~v~a~d~~tG 150 (369)
T 2hz6_A 138 TE-YTITMYDTKTR 150 (369)
T ss_dssp EE-EEEECCCSSSS
T ss_pred cC-CEEEEEECCCC
Confidence 31 34555655444
No 339
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.42 E-value=2.9 Score=38.09 Aligned_cols=201 Identities=11% Similarity=0.043 Sum_probs=100.5
Q ss_pred cceeeeEEcC--CCCEEEEEecCC----eEEEEECCCCCCCcceeeeeEEee---cCCcC-------CCCcceEEEeCC-
Q 039428 49 FLCETAKWDD--VGRRFLVSFLDG----GVGQVLVPDEYSPGTVLEEVKLVK---EDDVV-------GNATMGIAVDRP- 111 (335)
Q Consensus 49 ~~pegia~d~--~g~~~~~~~~~~----~I~~~d~~~g~~~~~v~~~~~~~~---~~~~~-------~~~p~Gi~~d~~- 111 (335)
....++++|+ .+.+|+... .+ .|++.++ .++. .+. ... .+... ......|++++.
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~-~g~~g~gl~~s~D-~G~t----W~~--~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~ 126 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAAR-TGHLGPTVFRSDD-GGGN----WTE--ATRPPAFNKAPEGETGRVVDHVFWLTPGHAS 126 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEE-C--CCEEEEEESS-TTSC----CEE--CSBCCCCCCCC----CCCCCEEEEEEECCTT
T ss_pred CceEEEEECCCCCCeEEEEec-CCCCCccEEEeCC-CCCC----ceE--CCccccCCCcccccccccccceeEEEeCCCC
Confidence 3467899998 666665553 44 7888864 3431 111 110 11110 012446888853
Q ss_pred -CCeEEEEEecCCCCccceEEEEECCCCeEEEEeecC-CCc------------cCCCCCCceeECC--CCcEEEEeCCCC
Q 039428 112 -RNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLS-GKS------------EEKSTADDIAVDA--EGNAYVTDVVSS 175 (335)
Q Consensus 112 -~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~------------~~~~~p~~~~vd~--~G~lyV~d~~~~ 175 (335)
.++||+.... ..|++.+-.+..-....... .+. ........|++|+ .+++|++... +
T Consensus 127 ~~~~l~~g~~~------ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-g 199 (394)
T 3b7f_A 127 EPGTWYAGTSP------QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-G 199 (394)
T ss_dssp STTCEEEEEET------TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-B
T ss_pred CCCEEEEEecC------CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-C
Confidence 5889996432 35888764333222111110 000 0012235788997 3679998543 4
Q ss_pred eEEEEccCCcEEEEecCC---ccccccccccccccCeEEEccC--CeEEEEECCCCEEEEEeCCCCceeEEEEecc-CCc
Q 039428 176 KIWKVGVEGQLLSIIRSP---LFTAKEWYKNVFGLNGIVYHPD--GFLIVIHMCSGNLFKIDIRKEEEEVKLIELR-GGS 249 (335)
Q Consensus 176 ~I~~~d~~g~~~~~~~~~---~~~~~~~~~~~~~p~Gia~~~d--g~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~-g~~ 249 (335)
.|++.+-.|+.-+.+... .+..+...........|+++++ +.||++. .+.|++.+-.+. ..+.+... ...
T Consensus 200 gl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~--~~gl~~s~D~G~--tW~~~~~~l~~~ 275 (394)
T 3b7f_A 200 GVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN--HCGIYRMDRREG--VWKRIGDAMPRE 275 (394)
T ss_dssp EEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE--TTEEEEEETTTT--EEECGGGGSCTT
T ss_pred CEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc--CCeEEEeCCCCC--cceECCCCCCCC
Confidence 688887767543322110 0000000000123567899986 6899875 345888875554 44433210 000
Q ss_pred CCCCCCeEEEcC--CCcEEEE
Q 039428 250 SLSLGDGLALLS--PTKLVVA 268 (335)
Q Consensus 250 ~~~~pdGia~d~--~g~l~va 268 (335)
.......+++++ .+.+|++
T Consensus 276 ~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 276 VGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp TCSCEEEEEECSSCTTCEEEE
T ss_pred CccceEEEEECCCCCCEEEEE
Confidence 001112467774 4689987
No 340
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.39 E-value=1.4 Score=44.29 Aligned_cols=117 Identities=9% Similarity=0.015 Sum_probs=66.7
Q ss_pred eeeeEEc-CCCCEEEEE-ecCC----eEEEEECCCC-CCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCC
Q 039428 51 CETAKWD-DVGRRFLVS-FLDG----GVGQVLVPDE-YSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVL 123 (335)
Q Consensus 51 pegia~d-~~g~~~~~~-~~~~----~I~~~d~~~g-~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~ 123 (335)
-.+++|+ |+|+.+..+ ...| +|+++|..++ +. +.. .+ +. ...+++.++++..|+.+..|..
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~----l~~--~~--~~----~~~~~~WspDg~~l~y~~~d~~ 243 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT----IAD--KV--SG----TNGEIVWGPDHTSLFYVTKDET 243 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC----CCC--CE--EE----ECSCCEECSSTTEEEEEEECTT
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe----CCc--cc--cC----ceeeEEEecCCCEEEEEEECCC
Confidence 4568999 999866555 3332 4999997655 41 110 11 11 1246778875556776544432
Q ss_pred CCccceEEEEECCCCeE--EEEeecCCCccCCCCCCceeECCCCc-EEEEe--CCCCeEEEEccCC
Q 039428 124 GNKYSALAAYDLSTWKR--LFLTQLSGKSEEKSTADDIAVDAEGN-AYVTD--VVSSKIWKVGVEG 184 (335)
Q Consensus 124 ~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~p~~~~vd~~G~-lyV~d--~~~~~I~~~d~~g 184 (335)
. ....|+++++.+++. ....... . ..+-.++.+++||+ |+++. .....|+.+|.++
T Consensus 244 ~-~~~~v~~~~lgt~~~~~~lv~~~~--~--~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 244 L-RENKVWRHVMGKLQSEDVCLYEEH--N--PLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp C-CEEEEEEEETTSCGGGCEEEEECC--C--TTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred C-CCCEEEEEECCCCchhcEEEEecC--C--CceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 2 224699999877631 1111111 1 12334678899996 44443 2356899998875
No 341
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.35 E-value=2.3 Score=36.79 Aligned_cols=199 Identities=12% Similarity=0.072 Sum_probs=105.6
Q ss_pred CCCEEEEEec-----CCeEEEEECCCCC---CCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceE
Q 039428 59 VGRRFLVSFL-----DGGVGQVLVPDEY---SPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSAL 130 (335)
Q Consensus 59 ~g~~~~~~~~-----~~~I~~~d~~~g~---~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v 130 (335)
++.+|++... .+.++++|+.+.. + + .....|. ....+.+++. ++.||+...-......+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W-----~--~~~~~p~--~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~ 130 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVW-----Y--SVAPMNV--RRGLAGATTL--GDMIYVSGGFDGSRRHTSM 130 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCC-----E--EECCCSS--CCBSCEEEEE--TTEEEEECCBCSSCBCCEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCee-----E--ECCCCCC--CccceeEEEE--CCEEEEEcccCCCcccceE
Confidence 4566666632 2579999965443 2 1 1211121 1233455555 6889996322111112569
Q ss_pred EEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeC-----CCCeEEEEccCCcEEEEecCCcccccccccccc
Q 039428 131 AAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDV-----VSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVF 205 (335)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~-----~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~ 205 (335)
.+||+.+++-....+.+.+ .... .+++ -++++|+... ....++++|+....-..+.. +. ...
T Consensus 131 ~~~d~~~~~W~~~~~~p~~---r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~--~p------~~r 197 (301)
T 2vpj_A 131 ERYDPNIDQWSMLGDMQTA---REGA-GLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTP--MA------TKR 197 (301)
T ss_dssp EEEETTTTEEEEEEECSSC---CBSC-EEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECC--CS------SCC
T ss_pred EEEcCCCCeEEECCCCCCC---cccc-eEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCC--CC------ccc
Confidence 9999998876544333211 1222 2222 3678999743 24679999998655443321 11 111
Q ss_pred ccCeEEEccCCeEEEEECC-----CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecCC-----CeE
Q 039428 206 GLNGIVYHPDGFLIVIHMC-----SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNPY-----PSA 275 (335)
Q Consensus 206 ~p~Gia~~~dg~Lyvad~~-----~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~~-----~~~ 275 (335)
.-..++.. ++.||+.-.. .+.++++|+... ....+...... .. -..+++. ++.+|+.+... +.+
T Consensus 198 ~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~-r~-~~~~~~~-~~~i~v~GG~~~~~~~~~v 271 (301)
T 2vpj_A 198 SGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTD--SWTTVTSMTTP-RC-YVGATVL-RGRLYAIAGYDGNSLLSSI 271 (301)
T ss_dssp BSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT--EEEEECCCSSC-CB-SCEEEEE-TTEEEEECCBCSSSBEEEE
T ss_pred ccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCC--cEEECCCCCCc-cc-ceeEEEE-CCEEEEEcCcCCCcccccE
Confidence 12334443 6788886433 467999999887 55555321101 11 1234443 57899984311 345
Q ss_pred EEEEcCCC-cEEE
Q 039428 276 RLVESSDG-WETA 287 (335)
Q Consensus 276 ~v~~~~~~-~~~~ 287 (335)
.+++...+ |...
T Consensus 272 ~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 272 ECYDPIIDSWEVV 284 (301)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEcCCCCeEEEc
Confidence 66666555 7643
No 342
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=92.36 E-value=10 Score=38.11 Aligned_cols=217 Identities=13% Similarity=0.059 Sum_probs=109.2
Q ss_pred ceeeeEEcCCC-CEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCC-------c--CCCCcceEEEeCC-CCeEEEE
Q 039428 50 LCETAKWDDVG-RRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDD-------V--VGNATMGIAVDRP-RNRLLVA 118 (335)
Q Consensus 50 ~pegia~d~~g-~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~-------~--~~~~p~Gi~~d~~-~g~l~v~ 118 (335)
...+|+++|.+ +++|+....+.|++-+. .|+. .+ ++. .+. . .......|++|+. .+++|++
T Consensus 22 ~i~~i~~~p~~~~~~y~~~~~ggv~~S~D-gG~t----W~--~~~-~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~ 93 (763)
T 3a0f_A 22 FISGLVAHPTEKDLIYARTDIGGTYRWNA-AKWE----WE--PIT-DFIINNALAGNGANLLGTESIALDPHNPDRLYLA 93 (763)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEET-TTTE----EE--ESC-TTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEE
T ss_pred ceeEEEeCCCCCCEEEEEeccCcEEEECC-CCCC----ee--ECc-cCccccccCCCcccccceeEEEECCCCCCEEEEE
Confidence 56789999986 67777766788999874 4541 11 111 110 0 1123578888873 4789986
Q ss_pred EecCC--CCccceEEEEECCCCeEEEEeecCCCc----cCCCCCCceeECCC--CcEEEEeCCCCeEEEEccCCcEEEEe
Q 039428 119 FTDVL--GNKYSALAAYDLSTWKRLFLTQLSGKS----EEKSTADDIAVDAE--GNAYVTDVVSSKIWKVGVEGQLLSII 190 (335)
Q Consensus 119 ~~D~~--~~~~~~v~~~d~~~~~~~~~~~~~~~~----~~~~~p~~~~vd~~--G~lyV~d~~~~~I~~~d~~g~~~~~~ 190 (335)
..+.. +.. ..|++= .+.|+.-.....+... .+......++++|. +.+|+... .+.|++=+-.|+.-+.+
T Consensus 94 ~g~~~~~~~~-~~i~~S-~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~-~~~l~~S~DgG~TW~~~ 170 (763)
T 3a0f_A 94 QGDYVQWDPW-AAFLVS-DDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR-TQGLWRSTDRAQTWSRM 170 (763)
T ss_dssp ECSCTTTCSC-CEEEEE-SSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS-SSCEEEESSTTSSCEEC
T ss_pred ecccccCCCC-ceEEEE-CCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC-CCcEEEECCCCcCcccc
Confidence 43211 111 345543 3445322112221100 00011146899875 67998743 45777765555433221
Q ss_pred cCCccccccccccccccCeEEEccCC--eEEEEECCCCEEEEEeCCCCceeEEEEeccCCc------------------C
Q 039428 191 RSPLFTAKEWYKNVFGLNGIVYHPDG--FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGS------------------S 250 (335)
Q Consensus 191 ~~~~~~~~~~~~~~~~p~Gia~~~dg--~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~------------------~ 250 (335)
. .+. ...........|+++|.. .+|++....+.|++-+ ++++ ..+.+...... .
T Consensus 171 ~--~~~--~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~S~-DgG~-tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 244 (763)
T 3a0f_A 171 N--QLP--DSSTYGIGIISVIFDPKNVGTAYVASHAVGGLWVTW-DGGA-NWSQVGGQPTQWSDWTKSIVAASGTAIQSS 244 (763)
T ss_dssp T--TSC--CCSCTTTCEEEEEECSSSTTCEEEEESSTTCEEEES-SSSS-SCEECTTCCCSCCHHHHHHHHHHCCCCSSS
T ss_pred c--cCc--ccCCCccceEEEEECCCCCCEEEEEEeCCCeEEEEC-CCCC-CccccCCCccccccccccccccccccccCC
Confidence 1 011 000011235577888753 7998876554566543 3332 33333210000 0
Q ss_pred CCCCCeEEEcCCCcEEEEec------CCCeEEEEEcCCC
Q 039428 251 LSLGDGLALLSPTKLVVAGN------PYPSARLVESSDG 283 (335)
Q Consensus 251 ~~~pdGia~d~~g~l~va~~------~~~~~~v~~~~~~ 283 (335)
...+.-+++.+++.||++-. +.....++++.++
T Consensus 245 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~D~ 283 (763)
T 3a0f_A 245 GPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPT 283 (763)
T ss_dssp SCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEETT
T ss_pred CCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEeCC
Confidence 11245567778889999831 1122456666555
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.30 E-value=0.78 Score=41.56 Aligned_cols=68 Identities=10% Similarity=0.056 Sum_probs=41.8
Q ss_pred CCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEe-CCCCeEEEEccCCcE
Q 039428 112 RNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTD-VVSSKIWKVGVEGQL 186 (335)
Q Consensus 112 ~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d-~~~~~I~~~d~~g~~ 186 (335)
++.+||.+.| +.|+.+|.++|+..+......... .-...+-+...+|.+|+.+ +..|+|+.++++...
T Consensus 10 ~~~V~v~t~d------G~l~Ald~~tG~~~W~~~~~~~~p-~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~ 78 (339)
T 2be1_A 10 SDILIAADVE------GGLHAVDRRNGHIIWSIEPENFQP-LIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGL 78 (339)
T ss_dssp EEEEEEEETT------SCEEEEETTTTEEEEEECGGGSCC-SEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEE
T ss_pred CCEEEEEeCC------CeEEEEECCCCcEEEEecCCccCC-cEEecCCccccCCcEEEEEECCCCEEEEEECCCCc
Confidence 4788886544 349999999999998776531001 1000001111356788877 578999999976543
No 344
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=91.37 E-value=6.8 Score=34.16 Aligned_cols=179 Identities=14% Similarity=0.128 Sum_probs=93.8
Q ss_pred CCeEEEEEecCC---CC---ccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCC-------CCeEE
Q 039428 112 RNRLLVAFTDVL---GN---KYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV-------SSKIW 178 (335)
Q Consensus 112 ~g~l~v~~~D~~---~~---~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~-------~~~I~ 178 (335)
++.||+..+-.. +. ....+++||+.+++-....+.+. ...-..+++ -++.+||.... ...++
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~----~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPS----ARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSS----CBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEE
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCc----cccccceEE-ECCEEEEEcCccCCCCcccceEE
Confidence 788999743110 10 01238999999886553322211 111122333 36789997432 24689
Q ss_pred EEccCCcEEEEecCCccccccccccccccCeEEEccCCeEEEEECC------CCEEEEEeCCCCceeEEEEeccCCcCCC
Q 039428 179 KVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMC------SGNLFKIDIRKEEEEVKLIELRGGSSLS 252 (335)
Q Consensus 179 ~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~------~~~v~~~d~~~~~~~~~~~~~~g~~~~~ 252 (335)
++|+....-..+.. +. ....-.+.+. .++.||+.-.. .+.++++|+... ....+.... . ..
T Consensus 131 ~yd~~~~~W~~~~~--~p------~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p-~-~r 197 (318)
T 2woz_A 131 CYDPVAAKWSEVKN--LP------IKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKG--DWKDLAPMK-T-PR 197 (318)
T ss_dssp EEETTTTEEEEECC--CS------SCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTT--EEEEECCCS-S-CC
T ss_pred EEeCCCCCEeECCC--CC------CcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCC--EEEECCCCC-C-Cc
Confidence 99988654432221 11 1112334444 47789886431 356999999987 555553211 1 01
Q ss_pred CCCeEEEcCCCcEEEEecC-----CCeEEEEEcCCC-cEEEEEeeeecCCCCCcceEEEEeCCeEEEE
Q 039428 253 LGDGLALLSPTKLVVAGNP-----YPSARLVESSDG-WETASVVAKFNGPTHRVATAATVKDGRVYLS 314 (335)
Q Consensus 253 ~pdGia~d~~g~l~va~~~-----~~~~~v~~~~~~-~~~~~~~~~~~~p~~~~Pt~va~~~g~lyV~ 314 (335)
.-.++++. ++.+|+.+.. .+.+.+++...+ |... .....+. .-.+++.-+++|||.
T Consensus 198 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r--~~~~~~~~~~~i~v~ 259 (318)
T 2woz_A 198 SMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVM---TEFPQER--SSISLVSLAGSLYAI 259 (318)
T ss_dssp BSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEEC---CCCSSCC--BSCEEEEETTEEEEE
T ss_pred ccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEEC---CCCCCcc--cceEEEEECCEEEEE
Confidence 11244443 5789998431 134566666544 6542 2222222 223455568999984
No 345
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.09 E-value=7.8 Score=34.33 Aligned_cols=180 Identities=13% Similarity=0.097 Sum_probs=92.3
Q ss_pred CCeEEEEEecCCCCccceEEEEECCC--CeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCC----------CCeEEE
Q 039428 112 RNRLLVAFTDVLGNKYSALAAYDLST--WKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVV----------SSKIWK 179 (335)
Q Consensus 112 ~g~l~v~~~D~~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~----------~~~I~~ 179 (335)
++.|||..+.. + +.+++||+.+ .+-....+.+ ..+.... .+++ -++.+||.... ...+++
T Consensus 19 ~~~iyv~GG~~-~---~~~~~~d~~~~~~~W~~~~~~p--~~~R~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~ 90 (357)
T 2uvk_A 19 NDTVYIGLGSA-G---TAWYKLDTQAKDKKWTALAAFP--GGPRDQA-TSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHK 90 (357)
T ss_dssp TTEEEEECGGG-T---TCEEEEETTSSSCCEEECCCCT--TCCCBSC-EEEE-ETTEEEEECCEEECTTSCEEECCCEEE
T ss_pred CCEEEEEeCcC-C---CeEEEEccccCCCCeeECCCCC--CCcCccc-eEEE-ECCEEEEEcCCCCCCCccceeeccEEE
Confidence 68999963221 1 3599999974 3333222221 0111122 2232 25789996432 357999
Q ss_pred EccCCcEEEEecCCccccccccccccccCeEEEccCCeEEEEECC-----------------------------------
Q 039428 180 VGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMC----------------------------------- 224 (335)
Q Consensus 180 ~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~----------------------------------- 224 (335)
+|+....-+.+.. .. | ....-...+. -++.||+.-..
T Consensus 91 yd~~~~~W~~~~~--~~-p----~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (357)
T 2uvk_A 91 YNPKTNSWVKLMS--HA-P----MGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAE 162 (357)
T ss_dssp EETTTTEEEECSC--CC-S----SCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGG
T ss_pred EeCCCCcEEECCC--CC-C----cccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccccc
Confidence 9998655432211 11 1 1111223344 57899987643
Q ss_pred ----CCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEecC------CCeEEEEEc--CCC-cEEEEEee
Q 039428 225 ----SGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAGNP------YPSARLVES--SDG-WETASVVA 291 (335)
Q Consensus 225 ----~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~~~------~~~~~v~~~--~~~-~~~~~~~~ 291 (335)
.+.++++|+... ..+.+...... -..-..+++. ++.+||.+.. .+.+.+++. ..+ |... .
T Consensus 163 ~~~~~~~v~~yd~~~~--~W~~~~~~p~~-~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~---~ 235 (357)
T 2uvk_A 163 DYFFNKFLLSFDPSTQ--QWSYAGESPWY-GTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKL---A 235 (357)
T ss_dssp GGCCCCEEEEEETTTT--EEEEEEECSSC-CCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEEC---C
T ss_pred ccCCcccEEEEeCCCC--cEEECCCCCCC-CcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEec---C
Confidence 368999999987 55544321100 0111345544 5789988431 345666654 222 5432 2
Q ss_pred eecCCCCCcceEEEEeCCeEEEE
Q 039428 292 KFNGPTHRVATAATVKDGRVYLS 314 (335)
Q Consensus 292 ~~~~p~~~~Pt~va~~~g~lyV~ 314 (335)
....|....-.++++.+++|||.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~iyv~ 258 (357)
T 2uvk_A 236 PVSSPDGVAGGFAGISNDSLIFA 258 (357)
T ss_dssp CSSTTTCCBSCEEEEETTEEEEE
T ss_pred CCCCCcccccceEEEECCEEEEE
Confidence 22223323323455668999983
No 346
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=88.71 E-value=21 Score=35.62 Aligned_cols=123 Identities=15% Similarity=0.161 Sum_probs=64.5
Q ss_pred CcceEEEeCCC-CeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCcc-CCCCCCceeECCC--CcEEEEeCC----
Q 039428 102 ATMGIAVDRPR-NRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSE-EKSTADDIAVDAE--GNAYVTDVV---- 173 (335)
Q Consensus 102 ~p~Gi~~d~~~-g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~p~~~~vd~~--G~lyV~d~~---- 173 (335)
...+|+++|.+ +.+|+.. +. ..|++.+-.+..-....+...... .......|++||. +++|++-..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~-~~-----ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~ 97 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARA-AI-----GGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTND 97 (737)
T ss_dssp CCCEEEECSSSTTCEEEEC-SS-----SCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSS
T ss_pred eeeEEEECCCCCCEEEEEe-cC-----CcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccc
Confidence 67899999743 7888853 22 348888754433222111100000 0133567999984 579998532
Q ss_pred ----CCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccCC--eEEEEECCCCEEEEE
Q 039428 174 ----SSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG--FLIVIHMCSGNLFKI 231 (335)
Q Consensus 174 ----~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg--~Lyvad~~~~~v~~~ 231 (335)
...|++-+-.|+.-+.+..+ +...+..+.......|+++|.. .||+.......|+|=
T Consensus 98 ~~~~~~~l~~S~DgG~TW~~~~~~-~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S 160 (737)
T 2cn3_A 98 WLPNMGAILRSTDRGETWEKTILP-FKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRS 160 (737)
T ss_dssp SSCCCCEEEEESSSSSSCEEEECS-SCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEE
T ss_pred cccCCccEEEeCCCCCCcccCCCC-cccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEe
Confidence 35788776666543222111 1100000001113679999853 788775332457754
No 347
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=88.23 E-value=15 Score=36.64 Aligned_cols=157 Identities=13% Similarity=0.128 Sum_probs=77.4
Q ss_pred eeeEEcCCCCEEEEE-ecC----CeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCc
Q 039428 52 ETAKWDDVGRRFLVS-FLD----GGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNK 126 (335)
Q Consensus 52 egia~d~~g~~~~~~-~~~----~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~ 126 (335)
.+++|+++|+.++.. ... .+|++++..++.. +...+...+.. ....++.+++++..|++...+. .
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~-----~~~lv~~~~~~--~~~~~~~~SpDg~~l~~~~~~~-~-- 293 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQS-----EDVCLYEEHNP--LFSAFMYKAADTNTLCIGSQSP-E-- 293 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGG-----GCEEEEECCCT--TCEEEEEECTTSSEEEEEEECS-S--
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCch-----hcEEEEecCCC--ceEEEEEECCCCCEEEEEecCC-C--
Confidence 378999999755555 322 3699998643321 11112222211 1234677887444555543222 1
Q ss_pred cceEEEEECCCC--eE--EEEeecCCCccCCCCCCceeECCCCcEEE-EeC---CCCeEEEEccCC--cEEE-EecCCcc
Q 039428 127 YSALAAYDLSTW--KR--LFLTQLSGKSEEKSTADDIAVDAEGNAYV-TDV---VSSKIWKVGVEG--QLLS-IIRSPLF 195 (335)
Q Consensus 127 ~~~v~~~d~~~~--~~--~~~~~~~~~~~~~~~p~~~~vd~~G~lyV-~d~---~~~~I~~~d~~g--~~~~-~~~~~~~ 195 (335)
.+.|+.+|++++ +. ...... . ...-..+.+..++.+|+ ++. .+.+|++++.++ +... ++...
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~----~-~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~-- 366 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPR----E-KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHS-- 366 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCC----C-TTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCC--
T ss_pred CceEEEEECCCCCCCceeEEeecC----C-CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCC--
Confidence 257999998865 22 211110 0 01111122112344555 443 356999999873 2222 22110
Q ss_pred ccccccccccccCeEEEccCCeEEEEECCCC--EEEEEeC
Q 039428 196 TAKEWYKNVFGLNGIVYHPDGFLIVIHMCSG--NLFKIDI 233 (335)
Q Consensus 196 ~~~~~~~~~~~p~Gia~~~dg~Lyvad~~~~--~v~~~d~ 233 (335)
......++.++ ++.|+++...++ +|+++++
T Consensus 367 -------~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 367 -------EDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp -------SSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred -------CCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 01123456665 447776655544 7888886
No 348
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=83.42 E-value=24 Score=32.21 Aligned_cols=177 Identities=10% Similarity=0.019 Sum_probs=94.5
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCC-----CCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCC
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEY-----SPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGN 125 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~-----~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~ 125 (335)
..-+++++..++++++..+ .+.+++..+.+ .+.+ .+....+..+ . +..|++| +..|+|+ .+
T Consensus 40 ~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~-~~~~~~~~lp----~-V~~l~fd--~~~L~v~-~~---- 105 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTP-LTFKWEKEIP----D-VIFVCFH--GDQVLVS-TR---- 105 (388)
T ss_dssp CBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCC-CCCSEEEECT----T-EEEEEEE--TTEEEEE-ES----
T ss_pred ccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhcccccc-ccceEEeeCC----C-eeEEEEC--CCEEEEE-cC----
Confidence 4678999999998887544 55557532111 0000 0100111112 2 6788883 6888885 22
Q ss_pred ccceEEEEECCCCeEEEEe-ecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEEEEecCCccccccccccc
Q 039428 126 KYSALAAYDLSTWKRLFLT-QLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNV 204 (335)
Q Consensus 126 ~~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~ 204 (335)
+.|..||..+....... ... ...+++..-+. ++.+. ..+|.|+++|.+......+ .
T Consensus 106 --~~l~v~dv~sl~~~~~~~~~~------~~v~~i~~~~p-~~av~-~~dG~L~v~dl~~~~~~~~-------------~ 162 (388)
T 1xip_A 106 --NALYSLDLEELSEFRTVTSFE------KPVFQLKNVNN-TLVIL-NSVNDLSALDLRTKSTKQL-------------A 162 (388)
T ss_dssp --SEEEEEESSSTTCEEEEEECS------SCEEEEEECSS-EEEEE-ETTSEEEEEETTTCCEEEE-------------E
T ss_pred --CcEEEEEchhhhccCccceee------cceeeEEecCC-CEEEE-ECCCCEEEEEccCCccccc-------------c
Confidence 35999998654321111 111 11223333222 24443 4557777777653322211 1
Q ss_pred cccCeEEEccCCeEEEEECCCCEEEEEeCCCCcee--EEEEeccC---C---cCCCCCCeEEEcCCCcEEEE
Q 039428 205 FGLNGIVYHPDGFLIVIHMCSGNLFKIDIRKEEEE--VKLIELRG---G---SSLSLGDGLALLSPTKLVVA 268 (335)
Q Consensus 205 ~~p~Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~--~~~~~~~g---~---~~~~~pdGia~d~~g~l~va 268 (335)
.+...+|++|+| +++ -..++++..+++++.+ . ...+..+. + . -..+..+.+-+++.+.++
T Consensus 163 ~~Vs~v~WSpkG-~~v-g~~dg~i~~~~~~~~~-~~~k~~I~~Pp~~~~~~~~-~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 163 QNVTSFDVTNSQ-LAV-LLKDRSFQSFAWRNGE-MEKQFEFSLPSELEELPVE-EYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ESEEEEEECSSE-EEE-EETTSCEEEEEEETTE-EEEEEEECCCHHHHTSCTT-TSEEEEEEESSSSEEEEE
T ss_pred CCceEEEEcCCc-eEE-EEcCCcEEEEcCCCcc-ccccceecCCcccccccCC-CeeEEEEEEecCCeEEEE
Confidence 236789999999 433 3356777777887762 1 44453211 0 1 133677888888877777
No 349
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=83.31 E-value=38 Score=33.63 Aligned_cols=205 Identities=15% Similarity=0.116 Sum_probs=100.9
Q ss_pred ceeeeEEcCCC-CEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcC---CCCcceEEEeCC-CCeEEEEEecCC-
Q 039428 50 LCETAKWDDVG-RRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVV---GNATMGIAVDRP-RNRLLVAFTDVL- 123 (335)
Q Consensus 50 ~pegia~d~~g-~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~---~~~p~Gi~~d~~-~g~l~v~~~D~~- 123 (335)
...+|+++|.. +++|+....+.|++-+. .++. .+ ++...+... ......|++||. .+++|++.....
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~t----W~--~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~ 96 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDP-STET----WI--PLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTN 96 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEET-TTTE----EE--ECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSS
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCC----EE--ECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccc
Confidence 45689999873 56666655688999985 3541 11 111111100 123568999973 468999753211
Q ss_pred --CCccceEEEEECCCCeEEEEeecCCC-c---cCCCCCCceeECCC--CcEEEEeCCCCeEEEEccCCcEEEEecCCcc
Q 039428 124 --GNKYSALAAYDLSTWKRLFLTQLSGK-S---EEKSTADDIAVDAE--GNAYVTDVVSSKIWKVGVEGQLLSIIRSPLF 195 (335)
Q Consensus 124 --~~~~~~v~~~d~~~~~~~~~~~~~~~-~---~~~~~p~~~~vd~~--G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~ 195 (335)
......|++= .+.|+.......+.. + .+......+++||. +.+|+.......||+-+-.|+.-+.+.. +
T Consensus 97 ~~~~~~~~l~~S-~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S~DgG~tW~~~~~--~ 173 (737)
T 2cn3_A 97 DWLPNMGAILRS-TDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRSTDYGVTWSKVES--F 173 (737)
T ss_dssp SSSCCCCEEEEE-SSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEESSTTSSCEECTT--C
T ss_pred ccccCCccEEEe-CCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEeCCCCcceecccC--C
Confidence 0001245553 344433211222110 0 00112367999985 5688875333578876555543222211 1
Q ss_pred cc-------ccc--cccccccCeEEEccCC--------eEEEEECCC-CEEEEEeCCCCceeEEEEeccCCcCCCCCCeE
Q 039428 196 TA-------KEW--YKNVFGLNGIVYHPDG--------FLIVIHMCS-GNLFKIDIRKEEEEVKLIELRGGSSLSLGDGL 257 (335)
Q Consensus 196 ~~-------~~~--~~~~~~p~Gia~~~dg--------~Lyvad~~~-~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGi 257 (335)
.. |.. .....+...++++|.. .+|++.... ..|+|= .++++ ..+.+. +...-..+.-+
T Consensus 174 ~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S-~DgG~-tW~~~~--~~p~~~~~~~~ 249 (737)
T 2cn3_A 174 PNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRS-TDGGV-TWKAVP--GQPKGLLPHHG 249 (737)
T ss_dssp CCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEE-SSTTS-CCEECT--TCCCSSEEEEE
T ss_pred CCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEE-cCCCC-ceEECC--CCCCcccceEE
Confidence 10 000 0001123347787743 799987544 257764 44443 333332 20000123446
Q ss_pred EEcCCCcEEEE
Q 039428 258 ALLSPTKLVVA 268 (335)
Q Consensus 258 a~d~~g~l~va 268 (335)
++++++.+|++
T Consensus 250 ~~~~~~~l~~~ 260 (737)
T 2cn3_A 250 VLASNGMLYIT 260 (737)
T ss_dssp EECTTSEEEEE
T ss_pred EECCCCeEEEE
Confidence 67888899987
No 350
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=79.77 E-value=12 Score=34.16 Aligned_cols=128 Identities=13% Similarity=0.094 Sum_probs=75.2
Q ss_pred CCeEEEEEecCCCCccc--eEEEEECCCCeEEEEeecCCCcc-CCCCCC-ceeECCCCcEEEEeCCCCeEEEEccCCcEE
Q 039428 112 RNRLLVAFTDVLGNKYS--ALAAYDLSTWKRLFLTQLSGKSE-EKSTAD-DIAVDAEGNAYVTDVVSSKIWKVGVEGQLL 187 (335)
Q Consensus 112 ~g~l~v~~~D~~~~~~~--~v~~~d~~~~~~~~~~~~~~~~~-~~~~p~-~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~ 187 (335)
+|.-|...-+... + .|..+|++.+++...+++...++ +...+. ++-+-.+..+|+++....+|+.+|.+|+..
T Consensus 37 ~~k~yL~~~N~~~---~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~~G~~~ 113 (369)
T 3s9j_A 37 NGKEYLHFENTQK---SLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISRLSSINSQGEII 113 (369)
T ss_dssp TTEEEEEEEECST---TCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTEEEEECTTCCEE
T ss_pred CCcEEEEEeCCCC---CcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcceEEEECCCceEE
Confidence 5655554344332 4 69999999999887777754332 133453 355667788999998999999999999887
Q ss_pred EEec--CCccccccccccccccCeEEEccCCeEEEEECC------------CCEEEEEeCCCCceeEEEEec
Q 039428 188 SIIR--SPLFTAKEWYKNVFGLNGIVYHPDGFLIVIHMC------------SGNLFKIDIRKEEEEVKLIEL 245 (335)
Q Consensus 188 ~~~~--~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad~~------------~~~v~~~d~~~~~~~~~~~~~ 245 (335)
..+. ...+... .......-+.-++..++.||++... ...+..+|+... ....+++
T Consensus 114 ~k~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~k~~~~a~~dl~~~--~~~~l~l 182 (369)
T 3s9j_A 114 RNYNFQTPEGRFT-PLSFGSYYNAPAFIKDSCIFLRQEILKPDMKKEDWPRTHMFASQDLRTG--EVKWIPI 182 (369)
T ss_dssp EEEECCCTTSCCC-CCCCBTTTTBCCEEETTEEEEECCCSSSSCCGGGGGGSEEEEEEETTTC--CEEEEEE
T ss_pred EEEecCCCccccc-cccccccccCcceecCceEEEeccccccccchhhhccCceEEEEECCCC--cEEEeec
Confidence 6532 1111000 0000011233334445667776432 235777888877 5555443
No 351
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=74.73 E-value=51 Score=30.06 Aligned_cols=148 Identities=11% Similarity=0.068 Sum_probs=86.7
Q ss_pred eeeeEEcCCCCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCCcCCCCcceEEEeCCCCeEEEEEecCCCCccceE
Q 039428 51 CETAKWDDVGRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSAL 130 (335)
Q Consensus 51 pegia~d~~g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v 130 (335)
+..+++ +++.++++ .++.|..||...-.. .. ...... .....+..-+ .++.+++.| +.|
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~----~~--~~~~~~----~~v~~i~~~~--p~~av~~~d------G~L 148 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELSE----FR--TVTSFE----KPVFQLKNVN--NTLVILNSV------NDL 148 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTTC----EE--EEEECS----SCEEEEEECS--SEEEEEETT------SEE
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhhc----cC--ccceee----cceeeEEecC--CCEEEEECC------CCE
Confidence 788999 78888888 678999998542221 01 111111 1234555443 346665433 359
Q ss_pred EEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEeCCCCeEEEEccCCcEE---EEecCCcccccccc---ccc
Q 039428 131 AAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTDVVSSKIWKVGVEGQLL---SIIRSPLFTAKEWY---KNV 204 (335)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d~~~~~I~~~d~~g~~~---~~~~~~~~~~~~~~---~~~ 204 (335)
.++|.+.+..... ......++.+|+| +++ ...++.|..+++++... ..+..+ |... +..
T Consensus 149 ~v~dl~~~~~~~~---------~~~Vs~v~WSpkG-~~v-g~~dg~i~~~~~~~~~~~~k~~I~~P----p~~~~~~~~~ 213 (388)
T 1xip_A 149 SALDLRTKSTKQL---------AQNVTSFDVTNSQ-LAV-LLKDRSFQSFAWRNGEMEKQFEFSLP----SELEELPVEE 213 (388)
T ss_dssp EEEETTTCCEEEE---------EESEEEEEECSSE-EEE-EETTSCEEEEEEETTEEEEEEEECCC----HHHHTSCTTT
T ss_pred EEEEccCCccccc---------cCCceEEEEcCCc-eEE-EEcCCcEEEEcCCCccccccceecCC----cccccccCCC
Confidence 9999987765421 1234579999999 444 45678888889887663 223111 1100 123
Q ss_pred cccCeEEEccCCeEEEEECC-----------CCEEEEEeCC
Q 039428 205 FGLNGIVYHPDGFLIVIHMC-----------SGNLFKIDIR 234 (335)
Q Consensus 205 ~~p~Gia~~~dg~Lyvad~~-----------~~~v~~~d~~ 234 (335)
..+.+|++.+++..+++-.. ...++.+...
T Consensus 214 ~~V~sI~wl~~~~flv~y~~~~~~~~~~~~~~~~~~ii~~~ 254 (388)
T 1xip_A 214 YSPLSVTILSPQDFLAVFGNVISETDDEVSYDQKMYIIKHI 254 (388)
T ss_dssp SEEEEEEESSSSEEEEEEECCCCSSCSSCCCCEEEEEEEEE
T ss_pred eeEEEEEEecCCeEEEEEcCCCCCcCcccCCcceEEEEEcC
Confidence 55889999988844443111 2268888843
No 352
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=66.56 E-value=19 Score=34.77 Aligned_cols=54 Identities=20% Similarity=0.406 Sum_probs=37.1
Q ss_pred ceEEEEECCCCeEEEEeecCCCccCCCCCCce----eECCC--C---cEEEEeCCCCeEEEEccCCc
Q 039428 128 SALAAYDLSTWKRLFLTQLSGKSEEKSTADDI----AVDAE--G---NAYVTDVVSSKIWKVGVEGQ 185 (335)
Q Consensus 128 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~----~vd~~--G---~lyV~d~~~~~I~~~d~~g~ 185 (335)
..|+++|+++|++++.+..... ...++++ .+|.+ | .+|+.|. .|.|||||..+.
T Consensus 223 ~~Lyv~d~~tG~li~~i~~~~~---~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl-~GnlWRfDl~~~ 285 (570)
T 3hx6_A 223 AALLIIDMETGAITRKLEVTGR---TGVPNGLSSPRLADNNSDGVADYAYAGDL-QGNLWRFDLIAG 285 (570)
T ss_dssp EEEEEEETTTCCEEEEEEECCS---TTSCCCEEEEEEECTTSSSBCCEEEEEET-TSEEEEEECSCS
T ss_pred cEEEEEECCCCceEEEEecCCC---CccCCccccceEEecCCCCceeEEEEEeC-CCcEEEEEcCCC
Confidence 6899999999998866554321 2234443 35654 3 4999985 589999998653
No 353
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=60.85 E-value=41 Score=30.10 Aligned_cols=65 Identities=12% Similarity=0.145 Sum_probs=34.9
Q ss_pred CcEEEEeCCCCeEEEEccC-CcEEEEecCCccccccccccccccCeEEEccCCeEEEEE-CCCCEEEEEeCCCC
Q 039428 165 GNAYVTDVVSSKIWKVGVE-GQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDGFLIVIH-MCSGNLFKIDIRKE 236 (335)
Q Consensus 165 G~lyV~d~~~~~I~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg~Lyvad-~~~~~v~~~d~~~~ 236 (335)
|.+||+ +..|.|+.+|.+ |+....+.......+- ....+. ...++.+|+.+ +.+|+|+.++...+
T Consensus 11 ~~V~v~-t~dG~l~Ald~~tG~~~W~~~~~~~~p~~---~~~~~~---~~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 11 DILIAA-DVEGGLHAVDRRNGHIIWSIEPENFQPLI---EIQEPS---RLETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEE-ETTSCEEEEETTTTEEEEEECGGGSCCSE---ECCCSC---TTTSSEEEEECCSTTTEEEEEETTTE
T ss_pred CEEEEE-eCCCeEEEEECCCCcEEEEecCCccCCcE---EecCCc---cccCCcEEEEEECCCCEEEEEECCCC
Confidence 556665 456778888864 5554433221001000 000010 01255777777 58899999998765
No 354
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=59.54 E-value=1.3e+02 Score=29.02 Aligned_cols=118 Identities=15% Similarity=0.182 Sum_probs=72.2
Q ss_pred eEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEE--e-----------
Q 039428 105 GIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVT--D----------- 171 (335)
Q Consensus 105 Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~--d----------- 171 (335)
+..-.+ +|++... +. ..++.+|..+. +++...++. .....-+++...++|++++. .
T Consensus 211 ~~~g~~-nG~l~~g--~G-----~~i~elD~~Gk-vv~~~~lp~--g~~~~HHD~~~l~nGn~Lv~v~~~d~~~~dG~~~ 279 (571)
T 3elq_A 211 GIRETP-RGTFTAV--QG-----QHWYEFDMMGQ-VLEDHKLPR--GFADATHESIETPNGTVLLRVGKSNYRRDDGVHV 279 (571)
T ss_dssp EEEECT-TSCEEEE--EB-----TEEEEECTTCC-EEEEEECCT--TEECBCSCEEECTTSCEEEEEEETTEECTTSCEE
T ss_pred EEEecC-CCCEEEe--cC-----cEEEEECCCCc-EEEEEECCC--CccccccceEEcCCCcEEEEEecccccCCCCccc
Confidence 444343 6666653 22 34899998755 444444421 10234578999999997763 1
Q ss_pred -CCCCeEEEEccCCcEEEEecCC-cc---c--c--------------c---c------------------ccccccccCe
Q 039428 172 -VVSSKIWKVGVEGQLLSIIRSP-LF---T--A--------------K---E------------------WYKNVFGLNG 209 (335)
Q Consensus 172 -~~~~~I~~~d~~g~~~~~~~~~-~~---~--~--------------~---~------------------~~~~~~~p~G 209 (335)
...+.|+.+|..|+.+..|... .+ . . + + ....-...|.
T Consensus 280 ~~vdD~I~EVD~tGeVv~eW~~~dhld~~~~~~~~~~d~~~~~~~~~~~~~G~~~~~~~~~~~g~~~g~~~~~Dw~HiNs 359 (571)
T 3elq_A 280 TTIRDHILEVDKSGRVVDVWDLTKILDPKRDALLGALDAGAVCVNVDLAHAGQQAKLEPDTPFGDALGVGPGRNWAHVNS 359 (571)
T ss_dssp CCCSCEEEEECTTSCEEEEEEHHHHSCTTCCTTGGGSBTTC-------CCCSCBCCCCTTCCSSSSSCSSTTSCSCCEEE
T ss_pred ceeccEEEEECCCCCEEEEEEhHHccCcccccchhccccccccccccccccccccccccccccccccccCCCCCCcEecc
Confidence 2356899999888887765320 00 0 0 0 0 0112345899
Q ss_pred EEEcc-CCeEEEEECCCCEEEEEeCC
Q 039428 210 IVYHP-DGFLIVIHMCSGNLFKIDIR 234 (335)
Q Consensus 210 ia~~~-dg~Lyvad~~~~~v~~~d~~ 234 (335)
|.+++ +++++++.+.. .|++|+.+
T Consensus 360 v~~d~~dd~~liSsR~~-~I~~Id~t 384 (571)
T 3elq_A 360 IAYDAKDDSIILSSRHQ-GVVKIGRD 384 (571)
T ss_dssp EEEETTTTEEEEEETTT-EEEEEETT
T ss_pred eeEcCCCCEEEEECCcc-EEEEEcCC
Confidence 99998 45899999888 99999974
No 355
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=55.07 E-value=1.7e+02 Score=29.14 Aligned_cols=204 Identities=12% Similarity=0.109 Sum_probs=103.4
Q ss_pred ceeeeEEcCC-CCEEEEEecCCeEEEEECCCCCCCcceeeeeEEeecCC---cCCCCcceEEEeCC-CCeEEEEEecCCC
Q 039428 50 LCETAKWDDV-GRRFLVSFLDGGVGQVLVPDEYSPGTVLEEVKLVKEDD---VVGNATMGIAVDRP-RNRLLVAFTDVLG 124 (335)
Q Consensus 50 ~pegia~d~~-g~~~~~~~~~~~I~~~d~~~g~~~~~v~~~~~~~~~~~---~~~~~p~Gi~~d~~-~g~l~v~~~D~~~ 124 (335)
...+|+++|. .+++|+....+.|++-+. .|+. .+ ++..... ........|++|+. .+++|++..+...
T Consensus 16 ~i~~i~~~p~~~~~~~a~~~~ggv~rS~D-gG~t----W~--~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~ 88 (789)
T 1sqj_A 16 YITGIVAHPKTKDLLYARTDIGGAYRWDA-GTSK----WI--PLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVG 88 (789)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEET-TTTE----EE--ESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTT
T ss_pred cEEEEEECCCCCCEEEEEecCCCEEEecC-CCCC----ee--ECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCC
Confidence 5678999986 356666656678999974 4541 11 1111110 01124678999973 3678886432110
Q ss_pred CccceEEEEECCCCeEEEEeecCCCcc----CCCCCCceeECCC--CcEEEEeCCCCeEEEEccCCcEEEEecCCccccc
Q 039428 125 NKYSALAAYDLSTWKRLFLTQLSGKSE----EKSTADDIAVDAE--GNAYVTDVVSSKIWKVGVEGQLLSIIRSPLFTAK 198 (335)
Q Consensus 125 ~~~~~v~~~d~~~~~~~~~~~~~~~~~----~~~~p~~~~vd~~--G~lyV~d~~~~~I~~~d~~g~~~~~~~~~~~~~~ 198 (335)
.....|++- .+.|+.......+.... +......++++|. +++|+.. ..+.|++-+-.|+.-+.+.. + +
T Consensus 89 ~~~~~v~~S-~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~-~~~gl~~S~DgG~TW~~~~~--~--~ 162 (789)
T 1sqj_A 89 DEWAAFYVS-EDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT-RTEGIWKSSDRAKTWTNVTS--I--P 162 (789)
T ss_dssp SSCCEEEEE-SSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC-SSSCEEEESSTTSSCEEETT--S--C
T ss_pred CcccEEEEE-CCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe-ccCCEEEECCCCcccCCCcc--C--c
Confidence 000235543 45565442222211100 0012346999985 4688864 34678876655653332211 0 1
Q ss_pred cccccccccCeEEEccC-C-eEEEEECCCCEEEEEeCCCCceeEEEEeccCCcC--------------CCCCCeEEEcC-
Q 039428 199 EWYKNVFGLNGIVYHPD-G-FLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSS--------------LSLGDGLALLS- 261 (335)
Q Consensus 199 ~~~~~~~~p~Gia~~~d-g-~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~--------------~~~pdGia~d~- 261 (335)
.......+...|+++|. + .+|++....+.|++= .++++ ..+.+....... +..|..+++++
T Consensus 163 ~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~S-~DgG~-TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 240 (789)
T 1sqj_A 163 DAFTNGIGYTSVIFDPERNGTIYASATAPQGMYVT-HDGGV-SWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALT 240 (789)
T ss_dssp CCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEEE-SSTTS-SCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEEC
T ss_pred cccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEEE-cCCCc-CcccCCCCcCccccccccccCcccccccccceeEEcCC
Confidence 00000123467888874 3 889887654667764 34443 333332100000 11236788887
Q ss_pred CCcEEEE
Q 039428 262 PTKLVVA 268 (335)
Q Consensus 262 ~g~l~va 268 (335)
.+.||++
T Consensus 241 ~~~l~~~ 247 (789)
T 1sqj_A 241 PNFLYVT 247 (789)
T ss_dssp SSEEEEE
T ss_pred CCeEEEE
Confidence 6788888
No 356
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=50.82 E-value=2e+02 Score=28.56 Aligned_cols=170 Identities=12% Similarity=0.029 Sum_probs=82.9
Q ss_pred CCcceEEEeCCC-CeEEEEEecCCCCccceEEEEECCCCeEEEEeecCC-----Ccc--CCCCCCceeECCC--CcEEEE
Q 039428 101 NATMGIAVDRPR-NRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSG-----KSE--EKSTADDIAVDAE--GNAYVT 170 (335)
Q Consensus 101 ~~p~Gi~~d~~~-g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~-----~~~--~~~~p~~~~vd~~--G~lyV~ 170 (335)
....+|+++|.+ +.+|+.. +. ..|++-+- +|+.-....... +.+ .......+++||. +.+|++
T Consensus 21 g~i~~i~~~p~~~~~~y~~~-~~-----ggv~~S~D-gG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~ 93 (763)
T 3a0f_A 21 GFISGLVAHPTEKDLIYART-DI-----GGTYRWNA-AKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLA 93 (763)
T ss_dssp SCEEEEEECSSSTTCEEEEE-SS-----SCEEEEET-TTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEE
T ss_pred CceeEEEeCCCCCCEEEEEe-cc-----CcEEEECC-CCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEE
Confidence 467899999855 5688853 22 24777663 443332111100 000 1234567899983 679996
Q ss_pred eC------CCCeEEEEccCCcEEEEecCCccccccccccccccCeEEEccC--CeEEEEECCCCEEEEEeCCCCceeEEE
Q 039428 171 DV------VSSKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPD--GFLIVIHMCSGNLFKIDIRKEEEEVKL 242 (335)
Q Consensus 171 d~------~~~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~d--g~Lyvad~~~~~v~~~d~~~~~~~~~~ 242 (335)
.. ..+.|++-+-.|+.-+.+..+ +..+...........|+++|. +.+|+.. ..+.|+|= .++++ ..+.
T Consensus 94 ~g~~~~~~~~~~i~~S~DgG~TW~~~~~~-~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~-~~~~l~~S-~DgG~-TW~~ 169 (763)
T 3a0f_A 94 QGDYVQWDPWAAFLVSDDRGKTFKQYRSP-VPMGANDMGRNGGERLAVNPHWTDELWFGS-RTQGLWRS-TDRAQ-TWSR 169 (763)
T ss_dssp ECSCTTTCSCCEEEEESSTTSSCEEEECS-SCCCTTSTTTTSBCCEEECTTSTTCEEEEC-SSSCEEEE-SSTTS-SCEE
T ss_pred ecccccCCCCceEEEECCCCCCceeccCC-cccCccccCccccceEEECCCCCCEEEEEe-CCCcEEEE-CCCCc-Cccc
Confidence 53 246777766556532222111 100000000001146899885 4788764 34567764 34432 3433
Q ss_pred Eec-cCCc-CCCCCCeEEEcCC--CcEEEEecCCCeEEEEEcCCC
Q 039428 243 IEL-RGGS-SLSLGDGLALLSP--TKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 243 ~~~-~g~~-~~~~pdGia~d~~--g~l~va~~~~~~~~v~~~~~~ 283 (335)
+.. .... .......+++++. +.+|++....+ .++++.|+
T Consensus 170 ~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g--~v~~S~Dg 212 (763)
T 3a0f_A 170 MNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVG--GLWVTWDG 212 (763)
T ss_dssp CTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTT--CEEEESSS
T ss_pred cccCcccCCCccceEEEEECCCCCCEEEEEEeCCC--eEEEECCC
Confidence 321 1000 0011235677764 46888855212 34556554
No 357
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=48.11 E-value=2.2e+02 Score=28.34 Aligned_cols=169 Identities=11% Similarity=0.077 Sum_probs=85.4
Q ss_pred CCcceEEEeCC-CCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCcc---CCCCCCceeECCC--CcEEEEeCC-
Q 039428 101 NATMGIAVDRP-RNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSE---EKSTADDIAVDAE--GNAYVTDVV- 173 (335)
Q Consensus 101 ~~p~Gi~~d~~-~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~---~~~~p~~~~vd~~--G~lyV~d~~- 173 (335)
....+|+++|. .+.+|+.. +. ..|++-+- .|+.-..... .... .......|++|+. +.+|++-..
T Consensus 15 g~i~~i~~~p~~~~~~~a~~-~~-----ggv~rS~D-gG~tW~~~~~-~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~ 86 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYART-DI-----GGAYRWDA-GTSKWIPLND-FIEAQDMNIMGTESIALDPNNPDRLYLAQGRY 86 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEE-SS-----SCEEEEET-TTTEEEESCT-TCCGGGGGGCSEEEEEEETTEEEEEEEEECSC
T ss_pred CcEEEEEECCCCCCEEEEEe-cC-----CCEEEecC-CCCCeeECcc-CCCcccccCCceeEEEECCCCCCEEEEEeCcc
Confidence 46789999874 36788853 22 24877764 3433211111 1110 1234668999985 579997532
Q ss_pred C----CeEEEEccCCcEEEEecCCccccccccccccccCeEEEccCC--eEEEEECCCCEEEEEeCCCCceeEEEEeccC
Q 039428 174 S----SKIWKVGVEGQLLSIIRSPLFTAKEWYKNVFGLNGIVYHPDG--FLIVIHMCSGNLFKIDIRKEEEEVKLIELRG 247 (335)
Q Consensus 174 ~----~~I~~~d~~g~~~~~~~~~~~~~~~~~~~~~~p~Gia~~~dg--~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g 247 (335)
. +.|++-+-.|+.-+.+..+ +..++..+.......|+++|.. .+|+.. ..+.|+|-+ ++++ ..+.+....
T Consensus 87 ~~~~~~~v~~S~DgG~TW~~~~~~-~~~~~~~~~~~~~~~iav~p~~~~~v~~g~-~~~gl~~S~-DgG~-TW~~~~~~~ 162 (789)
T 1sqj_A 87 VGDEWAAFYVSEDRGQSFTIYESP-FPMGANDMGRNNGERLAVNPFNSNEVWMGT-RTEGIWKSS-DRAK-TWTNVTSIP 162 (789)
T ss_dssp TTSSCCEEEEESSTTSEEEEEECS-SCCCTTSTTTTSCCCEEEETTEEEEEEEEC-SSSCEEEES-STTS-SCEEETTSC
T ss_pred CCCcccEEEEECCCCCcceeccCC-cccCccCCCccceeEEEEcCCCCCEEEEEe-ccCCEEEEC-CCCc-ccCCCccCc
Confidence 3 6888877667654433211 1100000001123579999853 677754 345677644 3332 455443211
Q ss_pred Cc--CCCCCCeEEEcCC--CcEEEEecCCCeEEEEEcCCC
Q 039428 248 GS--SLSLGDGLALLSP--TKLVVAGNPYPSARLVESSDG 283 (335)
Q Consensus 248 ~~--~~~~pdGia~d~~--g~l~va~~~~~~~~v~~~~~~ 283 (335)
.. .......+++++. +.+|++..... .++++.|+
T Consensus 163 ~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~--~v~~S~Dg 200 (789)
T 1sqj_A 163 DAFTNGIGYTSVIFDPERNGTIYASATAPQ--GMYVTHDG 200 (789)
T ss_dssp CCCSTTTCEEEEEECTTSTTCEEEEESSTT--CEEEESST
T ss_pred cccCCCCCeEEEEECCCCCCEEEEEEcCCC--eEEEEcCC
Confidence 00 0011235677764 47888854212 34555554
No 358
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=43.20 E-value=1.9e+02 Score=26.06 Aligned_cols=72 Identities=19% Similarity=0.378 Sum_probs=48.7
Q ss_pred CCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEEe--CC
Q 039428 96 DDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVTD--VV 173 (335)
Q Consensus 96 ~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~d--~~ 173 (335)
|+....-|..|.++++.|-+|+.+. . +.|+.||.+++..++...+.. ..+|++- ..
T Consensus 255 pea~~DFPVamqvs~kygviyviTK-~-----G~ihlyDleTgt~i~~nrIS~----------------d~iF~ta~~~~ 312 (365)
T 2xzh_A 255 PEAQNDFPVAMQISEKHDVVFLITK-Y-----GYIHLYDLETGTCIYMNRISG----------------ETIFVTAPHEA 312 (365)
T ss_dssp TTCTTCCEEEEEEETTTTEEEEEET-T-----SEEEEEETTTCCEEEEEECCS----------------SCEEEEEEEGG
T ss_pred ccccCCceEEEEecccCCEEEEEeC-C-----cEEEEEEcccCcEEEEeccCC----------------CceEEecccCC
Confidence 3433456899999988999999753 2 469999999998876655522 1345442 34
Q ss_pred CCeEEEEccCCcEEEE
Q 039428 174 SSKIWKVGVEGQLLSI 189 (335)
Q Consensus 174 ~~~I~~~d~~g~~~~~ 189 (335)
++.|..++.+|+...+
T Consensus 313 ~~Gi~~Vnr~GqVl~v 328 (365)
T 2xzh_A 313 TAGIIGVNRKGQVLSV 328 (365)
T ss_dssp GTEEEEEETTCEEEEE
T ss_pred CCcEEEEcCCCEEEEE
Confidence 5677777777766543
No 359
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=38.24 E-value=2.6e+02 Score=26.26 Aligned_cols=71 Identities=20% Similarity=0.372 Sum_probs=48.4
Q ss_pred CCcCCCCcceEEEeCCCCeEEEEEecCCCCccceEEEEECCCCeEEEEeecCCCccCCCCCCceeECCCCcEEEE--eCC
Q 039428 96 DDVVGNATMGIAVDRPRNRLLVAFTDVLGNKYSALAAYDLSTWKRLFLTQLSGKSEEKSTADDIAVDAEGNAYVT--DVV 173 (335)
Q Consensus 96 ~~~~~~~p~Gi~~d~~~g~l~v~~~D~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~vd~~G~lyV~--d~~ 173 (335)
|+....-|..|.++++.|-+|+.+. . +.|+.||.+++..++...+.. ..+|++ +..
T Consensus 254 pe~~~DFPvamqvs~kygviyviTK-~-----G~i~lyDleTgt~i~~nrIs~----------------~~iF~t~~~~~ 311 (494)
T 1bpo_A 254 PEAQNDFPVAMQISEKHDVVFLITK-Y-----GYIHLYDLETGTCIYMNRISG----------------ETIFVTAPHEA 311 (494)
T ss_dssp TTSTTCCEEEEEEETTTTEEEEEET-T-----SEEEEEETTTCCEEEEEECCS----------------SCEEEEEEETT
T ss_pred cccccCceeEEEecccCCEEEEEec-C-----ceEEEEecccceeeeeecccC----------------CceEEecccCC
Confidence 3333456899999998999999743 2 469999999998876555421 235554 244
Q ss_pred CCeEEEEccCCcEEE
Q 039428 174 SSKIWKVGVEGQLLS 188 (335)
Q Consensus 174 ~~~I~~~d~~g~~~~ 188 (335)
++.|..++.+|+...
T Consensus 312 ~~Gi~~Vnr~GqVl~ 326 (494)
T 1bpo_A 312 TAGIIGVNRKGQVLS 326 (494)
T ss_dssp TTEEEEEETTCEEEE
T ss_pred CCcEEEEccCceEEE
Confidence 667777777776554
No 360
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=31.80 E-value=1.9e+02 Score=26.00 Aligned_cols=78 Identities=13% Similarity=0.091 Sum_probs=49.7
Q ss_pred CCCCc--EEEEeCCCC--eEEEEccCCcE-EEEecCCccccccccccccccC-eEEEccCCeEEEEECCCCEEEEEeCCC
Q 039428 162 DAEGN--AYVTDVVSS--KIWKVGVEGQL-LSIIRSPLFTAKEWYKNVFGLN-GIVYHPDGFLIVIHMCSGNLFKIDIRK 235 (335)
Q Consensus 162 d~~G~--lyV~d~~~~--~I~~~d~~g~~-~~~~~~~~~~~~~~~~~~~~p~-Gia~~~dg~Lyvad~~~~~v~~~d~~~ 235 (335)
+.+|. +|.-+...+ .|..+|.+... ...+ .|...++.+ ...+. |+-+..+..+|+++....+|+.++.++
T Consensus 35 ~~~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i---~~ekEGPNg-i~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~~G 110 (369)
T 3s9j_A 35 EENGKEYLHFENTQKSLYDIVIFDIENQQIAKRI---PLHKTGPNG-LPAVFGSRPSPDSQYILVAQNNISRLSSINSQG 110 (369)
T ss_dssp EETTEEEEEEEECSTTCCEEEEEETTTTEEEEEE---ECBSSSTTB-CTTCCCEEESSSTTSEEEEEGGGTEEEEECTTC
T ss_pred ecCCcEEEEEeCCCCCcCcEEEEECCCCceeeee---ccccCCCCC-cccceeeEEecCCCEEEEEeCCcceEEEECCCc
Confidence 34553 666777777 99999998554 3322 122221111 11242 354555669999999999999999999
Q ss_pred CceeEEEEec
Q 039428 236 EEEEVKLIEL 245 (335)
Q Consensus 236 ~~~~~~~~~~ 245 (335)
. ....+.+
T Consensus 111 ~--~~~k~~~ 118 (369)
T 3s9j_A 111 E--IIRNYNF 118 (369)
T ss_dssp C--EEEEEEC
T ss_pred e--EEEEEec
Confidence 7 5666654
No 361
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=31.29 E-value=3.6e+02 Score=25.88 Aligned_cols=38 Identities=21% Similarity=0.296 Sum_probs=29.7
Q ss_pred CCCceeECCC-CcEEEEeCCCCeEEEEccCCcEEEEecCC
Q 039428 155 TADDIAVDAE-GNAYVTDVVSSKIWKVGVEGQLLSIIRSP 193 (335)
Q Consensus 155 ~p~~~~vd~~-G~lyV~d~~~~~I~~~d~~g~~~~~~~~~ 193 (335)
..|.+..|+. +++.++.... .|++++.+|+....++..
T Consensus 356 HiNsv~~d~~dd~~liSsR~~-~I~~Id~tG~V~W~LGg~ 394 (571)
T 3elq_A 356 HVNSIAYDAKDDSIILSSRHQ-GVVKIGRDKQVKWILAPS 394 (571)
T ss_dssp CEEEEEEETTTTEEEEEETTT-EEEEEETTSCEEEEESCS
T ss_pred EecceeEcCCCCEEEEECCcc-EEEEEcCCCcEEEEECCC
Confidence 3577888874 5788887777 999999988887777653
No 362
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=25.51 E-value=1.8e+02 Score=20.64 Aligned_cols=46 Identities=17% Similarity=0.230 Sum_probs=25.4
Q ss_pred eEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEe
Q 039428 209 GIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAG 269 (335)
Q Consensus 209 Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~ 269 (335)
-+.+..||+|++-+..+..+|.-+.. + . ..+.-+.++.+|++.+-+
T Consensus 53 ~l~l~~dGNLvl~~~~~~~~W~S~t~------------~-~--~~~~~~~L~ddGNlvly~ 98 (109)
T 3dzw_A 53 HLSMQSDGNLVVYSPRNNPIWASNTG------------G-E--NGNYVCVLQKDRNVVIYG 98 (109)
T ss_dssp EEEECTTSCEEEECTTSCEEEECCCC------------C-S--SSCEEEEECTTSCEEEEE
T ss_pred EEEEeCCCCEEEECCCCCEEEECCCC------------C-C--CCCEEEEEeCCCEEEEEC
Confidence 46777788888776544444421111 1 0 113346677788776654
No 363
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=20.50 E-value=2.4e+02 Score=20.18 Aligned_cols=46 Identities=20% Similarity=0.057 Sum_probs=25.0
Q ss_pred eEEEccCCeEEEEECCCCEEEEEeCCCCceeEEEEeccCCcCCCCCCeEEEcCCCcEEEEe
Q 039428 209 GIVYHPDGFLIVIHMCSGNLFKIDIRKEEEEVKLIELRGGSSLSLGDGLALLSPTKLVVAG 269 (335)
Q Consensus 209 Gia~~~dg~Lyvad~~~~~v~~~d~~~~~~~~~~~~~~g~~~~~~pdGia~d~~g~l~va~ 269 (335)
-+.+..+|+|++-+..+..+|.-+.. + . ..+.-+.++.+|++.+-+
T Consensus 60 ~l~l~~dGNLVl~d~~~~~iW~S~t~------------~-~--~~~~~~~L~~dGnlvly~ 105 (113)
T 3mez_B 60 FMRLGHSGELDITDDRLNTVFVSNTV------------G-Q--EGDYVLILQINGQAVVYG 105 (113)
T ss_dssp EEEECTTSCEEEECTTSCEEEECSCC------------C-S--SSCCEEEECTTSCEEEEC
T ss_pred EEEEeCCCcEEEECCCCCEEEECCCc------------C-C--CCCEEEEEcCCceEEEec
Confidence 46777788887776544333321110 1 0 113456777788766653
Done!