Query 039432
Match_columns 598
No_of_seqs 137 out of 180
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 16:23:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039432.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039432hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s9f_A Tryparedoxin; thioredox 99.5 5.4E-14 1.9E-18 129.5 10.4 128 227-369 34-164 (165)
2 1i5g_A Tryparedoxin II; electr 99.5 3.7E-13 1.3E-17 119.1 11.4 126 229-368 15-143 (144)
3 1o73_A Tryparedoxin; electron 99.4 8.8E-13 3E-17 116.1 11.9 125 229-368 16-143 (144)
4 1o8x_A Tryparedoxin, TRYX, TXN 99.4 4.9E-13 1.7E-17 118.8 10.2 126 229-369 16-144 (146)
5 2lus_A Thioredoxion; CR-Trp16, 98.7 5E-12 1.7E-16 110.6 0.0 115 230-358 12-131 (143)
6 4fo5_A Thioredoxin-like protei 99.1 1.5E-10 5.2E-15 102.3 7.0 107 230-352 20-130 (143)
7 2lrt_A Uncharacterized protein 99.0 2.4E-10 8.3E-15 103.1 6.9 106 230-351 23-129 (152)
8 3eur_A Uncharacterized protein 99.0 1.2E-10 4.1E-15 102.9 4.7 107 229-352 18-130 (142)
9 2lrn_A Thiol:disulfide interch 99.0 1.7E-09 5.9E-14 96.4 10.4 109 230-352 17-126 (152)
10 3raz_A Thioredoxin-related pro 98.9 3.7E-09 1.3E-13 94.2 10.5 106 230-350 12-120 (151)
11 3ewl_A Uncharacterized conserv 98.9 5.3E-10 1.8E-14 98.0 4.7 104 230-350 15-124 (142)
12 3fw2_A Thiol-disulfide oxidore 98.9 3.1E-09 1E-13 94.6 8.9 109 229-352 18-133 (150)
13 2ggt_A SCO1 protein homolog, m 98.9 1.1E-08 3.7E-13 91.5 11.5 116 229-351 10-142 (164)
14 3fkf_A Thiol-disulfide oxidore 98.8 7.9E-09 2.7E-13 90.2 9.1 111 229-352 18-131 (148)
15 2rli_A SCO2 protein homolog, m 98.8 2.6E-08 9E-13 89.8 11.1 116 229-351 13-145 (171)
16 3hcz_A Possible thiol-disulfid 98.8 1.1E-09 3.7E-14 95.7 1.7 107 230-351 19-127 (148)
17 2lja_A Putative thiol-disulfid 98.8 5.8E-09 2E-13 92.1 6.4 107 229-351 17-124 (152)
18 3gl3_A Putative thiol:disulfid 98.8 5.7E-09 1.9E-13 92.2 5.7 104 231-351 17-121 (152)
19 2v1m_A Glutathione peroxidase; 98.7 5.1E-08 1.7E-12 87.5 10.9 118 229-351 18-148 (169)
20 3me7_A Putative uncharacterize 98.7 4.8E-08 1.6E-12 90.2 10.9 115 229-351 15-142 (170)
21 3eyt_A Uncharacterized protein 98.7 2.5E-08 8.5E-13 88.8 8.5 114 230-351 16-133 (158)
22 4evm_A Thioredoxin family prot 98.7 1.4E-08 4.6E-13 86.5 6.3 111 229-351 9-120 (138)
23 2vup_A Glutathione peroxidase- 98.7 3.8E-08 1.3E-12 92.0 9.9 117 230-351 36-166 (190)
24 2f9s_A Thiol-disulfide oxidore 98.7 9.1E-09 3.1E-13 91.2 5.2 105 230-351 14-119 (151)
25 2h30_A Thioredoxin, peptide me 98.7 2.2E-08 7.4E-13 89.5 7.6 109 230-351 26-137 (164)
26 3hdc_A Thioredoxin family prot 98.7 3.4E-08 1.2E-12 88.7 8.8 120 229-368 28-155 (158)
27 3lor_A Thiol-disulfide isomera 98.7 3.5E-08 1.2E-12 87.8 7.6 115 230-351 18-136 (160)
28 3or5_A Thiol:disulfide interch 98.7 3.6E-08 1.2E-12 88.0 7.3 108 230-351 22-132 (165)
29 3drn_A Peroxiredoxin, bacterio 98.6 7.1E-08 2.4E-12 87.5 8.8 105 229-351 15-126 (161)
30 3erw_A Sporulation thiol-disul 98.6 9.6E-08 3.3E-12 82.8 9.3 104 230-350 23-129 (145)
31 3dwv_A Glutathione peroxidase- 98.6 5.3E-08 1.8E-12 91.0 8.0 118 229-351 33-164 (187)
32 1lu4_A Soluble secreted antige 98.6 2.6E-08 9.1E-13 85.6 5.4 102 229-349 11-113 (136)
33 3ha9_A Uncharacterized thiored 98.6 2.9E-08 9.8E-13 89.5 5.7 107 229-350 24-145 (165)
34 1jfu_A Thiol:disulfide interch 98.6 1.4E-07 4.9E-12 86.7 10.4 110 229-351 47-159 (186)
35 3kcm_A Thioredoxin family prot 98.6 5.4E-08 1.8E-12 86.1 7.1 106 230-351 16-122 (154)
36 1xvw_A Hypothetical protein RV 98.6 4E-08 1.4E-12 88.1 6.1 106 230-351 23-137 (160)
37 3ztl_A Thioredoxin peroxidase; 98.6 5.8E-08 2E-12 93.9 7.5 104 231-351 58-175 (222)
38 2ls5_A Uncharacterized protein 98.0 5.2E-09 1.8E-13 93.8 0.0 106 230-351 21-130 (159)
39 2obi_A PHGPX, GPX-4, phospholi 98.6 1.7E-07 5.8E-12 86.7 10.2 117 229-351 34-165 (183)
40 2cvb_A Probable thiol-disulfid 98.6 6.1E-08 2.1E-12 89.5 7.1 108 230-351 21-132 (188)
41 2p5q_A Glutathione peroxidase 98.6 2.5E-07 8.6E-12 83.1 10.7 118 229-351 19-149 (170)
42 1we0_A Alkyl hydroperoxide red 98.6 1.2E-07 4E-12 88.1 8.6 101 234-351 23-134 (187)
43 2bmx_A Alkyl hydroperoxidase C 98.6 1.4E-07 4.9E-12 88.4 9.3 102 233-351 36-147 (195)
44 1xzo_A BSSCO, hypothetical pro 98.6 2.2E-07 7.4E-12 84.0 10.1 115 229-351 20-151 (174)
45 2gs3_A PHGPX, GPX-4, phospholi 98.6 2E-07 6.8E-12 86.7 10.0 117 229-351 36-167 (185)
46 1zzo_A RV1677; thioredoxin fol 98.6 3.8E-08 1.3E-12 84.2 4.6 101 230-349 13-115 (136)
47 3cmi_A Peroxiredoxin HYR1; thi 98.6 1.5E-07 5.1E-12 86.0 8.8 118 229-351 19-149 (171)
48 3u5r_E Uncharacterized protein 98.5 6.2E-08 2.1E-12 93.1 5.9 109 229-350 45-158 (218)
49 1zof_A Alkyl hydroperoxide-red 98.5 7.3E-08 2.5E-12 90.4 6.2 109 231-351 18-138 (198)
50 2b7k_A SCO1 protein; metalloch 98.5 1.7E-07 5.8E-12 88.7 8.7 115 229-351 28-160 (200)
51 2k6v_A Putative cytochrome C o 98.5 3.2E-07 1.1E-11 82.5 9.5 114 229-352 23-153 (172)
52 2h01_A 2-Cys peroxiredoxin; th 98.5 2.4E-07 8.2E-12 86.5 8.3 104 231-351 17-136 (192)
53 3gkn_A Bacterioferritin comigr 98.5 2.1E-07 7.2E-12 83.8 7.6 104 229-350 22-139 (163)
54 3kij_A Probable glutathione pe 98.5 7.6E-07 2.6E-11 82.3 11.0 116 229-351 25-151 (180)
55 3lwa_A Secreted thiol-disulfid 98.5 1.3E-07 4.4E-12 87.0 5.8 112 231-351 48-162 (183)
56 3kh7_A Thiol:disulfide interch 98.5 1.1E-07 3.7E-12 88.0 5.2 99 233-351 49-148 (176)
57 2b5x_A YKUV protein, TRXY; thi 98.5 1E-07 3.5E-12 82.9 4.6 108 230-351 17-126 (148)
58 3ia1_A THIO-disulfide isomeras 98.5 2.1E-07 7.2E-12 82.4 6.6 106 229-351 18-125 (154)
59 2l5o_A Putative thioredoxin; s 98.5 7.8E-07 2.7E-11 78.5 10.1 105 230-350 16-121 (153)
60 4hde_A SCO1/SENC family lipopr 98.4 6.9E-07 2.4E-11 82.9 10.1 115 228-350 18-148 (170)
61 2c0d_A Thioredoxin peroxidase 98.4 4.6E-07 1.6E-11 88.2 8.8 104 231-351 42-161 (221)
62 3ixr_A Bacterioferritin comigr 98.4 4.5E-07 1.5E-11 84.4 8.0 104 230-351 39-156 (179)
63 1psq_A Probable thiol peroxida 98.4 1.5E-06 5.3E-11 78.9 11.3 104 229-352 29-142 (163)
64 1qmv_A Human thioredoxin perox 98.4 2E-07 7E-12 87.5 5.5 104 231-351 21-140 (197)
65 1zye_A Thioredoxin-dependent p 98.4 5.6E-07 1.9E-11 87.0 8.4 104 231-351 45-162 (220)
66 1uul_A Tryparedoxin peroxidase 98.4 5.1E-07 1.7E-11 85.3 7.9 104 231-351 23-142 (202)
67 1kng_A Thiol:disulfide interch 98.4 5.8E-07 2E-11 79.4 7.8 99 233-350 33-132 (156)
68 2i81_A 2-Cys peroxiredoxin; st 98.4 4E-07 1.4E-11 87.7 7.1 104 231-351 38-157 (213)
69 2ywi_A Hypothetical conserved 98.4 1.7E-07 5.8E-12 86.7 3.8 109 230-351 33-146 (196)
70 2f8a_A Glutathione peroxidase 98.3 1.3E-06 4.6E-11 83.8 9.8 117 230-351 34-188 (208)
71 3p7x_A Probable thiol peroxida 98.3 2E-06 6.8E-11 78.5 10.1 103 229-351 33-144 (166)
72 2pn8_A Peroxiredoxin-4; thiore 98.3 6.3E-07 2.2E-11 86.2 6.9 103 232-351 38-154 (211)
73 2yzh_A Probable thiol peroxida 98.3 2.5E-06 8.5E-11 78.0 10.5 101 230-351 35-148 (171)
74 2i3y_A Epididymal secretory gl 98.3 2.2E-06 7.6E-11 83.5 10.5 117 230-351 43-192 (215)
75 1xvq_A Thiol peroxidase; thior 98.3 5.2E-07 1.8E-11 83.3 5.7 102 230-352 32-145 (175)
76 2r37_A Glutathione peroxidase 98.3 2.8E-06 9.5E-11 82.1 10.8 117 230-351 25-174 (207)
77 2b1k_A Thiol:disulfide interch 98.3 2E-06 6.8E-11 77.6 8.9 100 231-350 39-140 (168)
78 3qpm_A Peroxiredoxin; oxidored 98.3 1E-06 3.5E-11 86.8 7.5 103 232-351 67-183 (240)
79 2jsy_A Probable thiol peroxida 98.3 2.3E-07 7.7E-12 84.1 2.5 104 229-352 31-144 (167)
80 2p31_A CL683, glutathione pero 98.3 1.5E-06 5.2E-11 80.5 8.2 113 229-351 36-162 (181)
81 4g2e_A Peroxiredoxin; redox pr 98.3 1.5E-06 5.2E-11 79.3 7.6 104 229-350 17-133 (157)
82 3zrd_A Thiol peroxidase; oxido 98.3 3.5E-06 1.2E-10 80.4 10.3 104 229-351 65-180 (200)
83 1n8j_A AHPC, alkyl hydroperoxi 98.2 1.4E-06 4.9E-11 81.6 7.0 104 231-351 17-133 (186)
84 1q98_A Thiol peroxidase, TPX; 98.2 3.3E-06 1.1E-10 77.0 9.2 104 230-352 31-146 (165)
85 2hyx_A Protein DIPZ; thioredox 98.2 7.5E-07 2.6E-11 93.3 4.3 109 230-351 70-180 (352)
86 3tjj_A Peroxiredoxin-4; thiore 98.1 2.3E-06 7.7E-11 85.5 5.8 104 231-351 80-197 (254)
87 2a4v_A Peroxiredoxin DOT5; yea 98.1 5.6E-06 1.9E-10 74.6 7.4 102 230-351 21-132 (159)
88 3idv_A Protein disulfide-isome 98.1 3.2E-06 1.1E-10 80.3 6.0 153 240-442 30-193 (241)
89 3hxs_A Thioredoxin, TRXP; elec 98.0 1.4E-05 4.8E-10 70.1 7.8 82 229-350 38-120 (141)
90 1nm3_A Protein HI0572; hybrid, 98.0 4.8E-05 1.6E-09 73.6 12.3 171 231-446 19-211 (241)
91 4gqc_A Thiol peroxidase, perox 97.9 5.9E-06 2E-10 76.3 4.8 105 229-351 18-136 (164)
92 1z6n_A Hypothetical protein PA 97.9 1.2E-05 4.1E-10 75.5 5.6 78 235-350 47-125 (167)
93 1xcc_A 1-Cys peroxiredoxin; un 97.8 1.7E-05 5.8E-10 77.1 6.3 103 231-351 20-143 (220)
94 1tp9_A Peroxiredoxin, PRX D (t 97.8 2.3E-05 7.9E-10 71.5 6.6 103 230-351 20-142 (162)
95 1prx_A HORF6; peroxiredoxin, h 97.8 3.4E-05 1.2E-09 75.2 8.2 103 231-351 20-146 (224)
96 2v2g_A Peroxiredoxin 6; oxidor 97.8 2.2E-05 7.4E-10 77.5 6.6 103 231-351 18-142 (233)
97 2l57_A Uncharacterized protein 97.8 3.7E-05 1.3E-09 66.3 7.2 76 237-350 21-97 (126)
98 3a2v_A Probable peroxiredoxin; 97.8 9E-06 3.1E-10 81.4 3.3 101 234-351 22-139 (249)
99 3f9u_A Putative exported cytoc 97.8 7.2E-06 2.5E-10 74.8 2.3 100 235-351 40-146 (172)
100 2ju5_A Thioredoxin disulfide i 97.7 5.3E-06 1.8E-10 75.3 0.9 89 234-351 39-132 (154)
101 2wfc_A Peroxiredoxin 5, PRDX5; 97.7 3.6E-05 1.2E-09 71.5 6.5 103 230-351 18-138 (167)
102 2fwh_A Thiol:disulfide interch 97.7 4.2E-05 1.5E-09 67.3 5.2 79 234-349 23-105 (134)
103 3fk8_A Disulphide isomerase; A 97.6 3.9E-05 1.3E-09 66.7 4.3 75 240-351 27-107 (133)
104 3ul3_B Thioredoxin, thioredoxi 97.5 0.00011 3.6E-09 64.0 6.0 79 231-350 31-110 (128)
105 2l5l_A Thioredoxin; structural 97.4 0.00022 7.5E-09 62.7 6.5 69 241-349 37-106 (136)
106 2voc_A Thioredoxin; electron t 97.3 0.00025 8.7E-09 60.0 5.7 69 241-350 16-85 (112)
107 3cxg_A Putative thioredoxin; m 97.3 0.00017 5.8E-09 63.8 4.5 71 235-347 33-105 (133)
108 3mng_A Peroxiredoxin-5, mitoch 97.3 0.00051 1.8E-08 64.5 7.5 104 230-352 30-153 (173)
109 1nsw_A Thioredoxin, TRX; therm 97.2 0.00042 1.4E-08 57.1 6.0 69 241-350 16-85 (105)
110 3uma_A Hypothetical peroxiredo 97.2 0.00015 5.2E-09 68.7 3.5 103 231-352 43-164 (184)
111 3d6i_A Monothiol glutaredoxin- 97.2 0.00079 2.7E-08 56.4 7.2 70 241-350 20-90 (112)
112 2trx_A Thioredoxin; electron t 97.2 0.00054 1.8E-08 56.7 6.0 69 241-350 19-88 (108)
113 3qfa_C Thioredoxin; protein-pr 97.2 0.00064 2.2E-08 58.2 6.7 71 238-350 27-98 (116)
114 3die_A Thioredoxin, TRX; elect 97.2 0.00067 2.3E-08 55.7 6.3 69 241-350 18-87 (106)
115 1thx_A Thioredoxin, thioredoxi 97.1 0.0011 3.9E-08 55.1 7.5 69 241-350 24-93 (115)
116 3uvt_A Thioredoxin domain-cont 97.1 0.00099 3.4E-08 55.1 7.0 71 241-349 20-91 (111)
117 3tue_A Tryparedoxin peroxidase 97.1 0.00061 2.1E-08 67.3 6.5 108 231-350 45-161 (219)
118 3qou_A Protein YBBN; thioredox 97.1 0.00062 2.1E-08 66.8 6.5 69 241-350 25-94 (287)
119 1t00_A Thioredoxin, TRX; redox 97.1 0.00074 2.5E-08 56.4 6.0 69 241-350 22-91 (112)
120 3f3q_A Thioredoxin-1; His TAG, 97.1 0.00072 2.4E-08 57.2 5.9 68 241-350 23-91 (109)
121 2yzu_A Thioredoxin; redox prot 97.1 0.00091 3.1E-08 54.8 6.4 69 241-350 17-86 (109)
122 4euy_A Uncharacterized protein 97.1 0.00059 2E-08 56.9 5.2 68 241-350 17-85 (105)
123 1zma_A Bacterocin transport ac 97.1 0.00071 2.4E-08 57.6 5.8 73 241-350 28-101 (118)
124 1dby_A Chloroplast thioredoxin 97.1 0.001 3.6E-08 54.9 6.6 69 241-350 18-87 (107)
125 2lst_A Thioredoxin; structural 96.1 9.4E-05 3.2E-09 63.9 0.0 79 232-348 9-92 (130)
126 1w4v_A Thioredoxin, mitochondr 97.0 0.0009 3.1E-08 57.3 6.1 69 241-350 30-99 (119)
127 2i4a_A Thioredoxin; acidophIle 97.0 0.00085 2.9E-08 55.1 5.7 69 241-350 19-88 (107)
128 1xwb_A Thioredoxin; dimerizati 97.0 0.00099 3.4E-08 54.6 5.9 71 239-350 17-88 (106)
129 3keb_A Probable thiol peroxida 97.0 0.0033 1.1E-07 62.2 10.6 101 230-351 36-152 (224)
130 2e0q_A Thioredoxin; electron t 97.0 0.0012 4E-08 53.6 6.1 68 241-350 15-83 (104)
131 2o8v_B Thioredoxin 1; disulfid 97.0 0.00066 2.3E-08 59.5 4.8 69 241-350 39-108 (128)
132 3sbc_A Peroxiredoxin TSA1; alp 97.0 0.00089 3E-08 66.0 6.3 107 232-350 42-157 (216)
133 2l6c_A Thioredoxin; oxidoreduc 97.0 0.0026 8.9E-08 53.8 8.4 69 240-350 17-86 (110)
134 1gh2_A Thioredoxin-like protei 97.0 0.0011 3.7E-08 55.2 5.8 68 241-350 20-88 (107)
135 1xfl_A Thioredoxin H1; AT3G510 96.9 0.0013 4.5E-08 57.2 6.5 68 241-350 37-105 (124)
136 2oe3_A Thioredoxin-3; electron 96.9 0.0011 3.9E-08 56.8 6.0 68 241-350 29-97 (114)
137 2dml_A Protein disulfide-isome 96.9 0.002 6.8E-08 55.3 7.5 67 241-347 34-101 (130)
138 3d22_A TRXH4, thioredoxin H-ty 96.9 0.00081 2.8E-08 58.7 5.1 70 239-350 43-113 (139)
139 2pu9_C TRX-F, thioredoxin F-ty 96.9 0.00089 3E-08 56.1 5.1 72 238-350 20-92 (111)
140 3tco_A Thioredoxin (TRXA-1); d 96.9 0.0014 4.9E-08 53.8 6.3 69 241-350 20-89 (109)
141 1x5e_A Thioredoxin domain cont 96.9 0.0006 2.1E-08 58.6 4.1 69 240-349 21-90 (126)
142 2wz9_A Glutaredoxin-3; protein 96.9 0.0011 3.7E-08 59.6 5.9 68 241-350 31-99 (153)
143 1x5d_A Protein disulfide-isome 96.9 0.00067 2.3E-08 58.2 4.3 72 241-349 24-96 (133)
144 2pwj_A Mitochondrial peroxired 96.9 0.0011 3.7E-08 61.4 6.0 101 233-351 33-150 (171)
145 2f51_A Thioredoxin; electron t 96.9 0.00076 2.6E-08 58.1 4.5 67 242-349 23-93 (118)
146 3gix_A Thioredoxin-like protei 96.9 0.0014 4.7E-08 59.4 6.4 68 241-349 22-90 (149)
147 3gnj_A Thioredoxin domain prot 96.9 0.0013 4.5E-08 54.4 5.9 68 241-349 21-89 (111)
148 2kuc_A Putative disulphide-iso 96.9 0.00038 1.3E-08 59.9 2.5 79 234-350 19-101 (130)
149 2dj0_A Thioredoxin-related tra 96.8 0.0017 5.7E-08 57.0 6.2 71 240-350 24-101 (137)
150 1ep7_A Thioredoxin CH1, H-type 96.8 0.0015 5.2E-08 54.3 5.6 68 242-350 24-92 (112)
151 1syr_A Thioredoxin; SGPP, stru 96.8 0.0019 6.6E-08 54.4 6.3 68 241-350 25-93 (112)
152 1mek_A Protein disulfide isome 96.8 0.0014 4.7E-08 54.7 5.3 71 241-349 23-94 (120)
153 3m9j_A Thioredoxin; oxidoreduc 96.8 0.0013 4.3E-08 54.1 5.0 70 239-350 17-87 (105)
154 1fb6_A Thioredoxin M; electron 96.8 0.002 6.9E-08 52.7 6.0 69 241-350 17-86 (105)
155 1sen_A Thioredoxin-like protei 96.8 0.00012 4.1E-09 67.4 -1.6 99 235-376 39-140 (164)
156 2dj1_A Protein disulfide-isome 96.8 0.0011 3.9E-08 57.6 4.7 71 241-349 33-104 (140)
157 3h79_A Thioredoxin-like protei 96.8 0.0025 8.6E-08 55.0 6.8 73 241-348 32-105 (127)
158 2xc2_A Thioredoxinn; oxidoredu 96.7 0.002 6.9E-08 54.5 5.9 70 238-350 29-99 (117)
159 1qgv_A Spliceosomal protein U5 96.7 0.00098 3.3E-08 59.9 4.1 69 241-350 22-91 (142)
160 3zzx_A Thioredoxin; oxidoreduc 96.7 0.002 6.7E-08 55.4 5.7 69 240-350 18-87 (105)
161 2vlu_A Thioredoxin, thioredoxi 96.7 0.0021 7.1E-08 54.6 5.8 68 241-350 33-101 (122)
162 1oaz_A Thioredoxin 1; immune s 96.7 0.0014 4.6E-08 57.2 4.6 70 241-350 20-103 (123)
163 2j23_A Thioredoxin; immune pro 96.7 0.0021 7E-08 55.3 5.6 70 241-350 32-102 (121)
164 1r26_A Thioredoxin; redox-acti 96.7 0.002 7E-08 56.4 5.7 68 241-350 36-104 (125)
165 3aps_A DNAJ homolog subfamily 96.7 0.0013 4.4E-08 55.9 4.3 69 241-349 20-89 (122)
166 3emx_A Thioredoxin; structural 96.7 0.0023 7.8E-08 56.3 5.9 76 240-350 30-106 (135)
167 2dj3_A Protein disulfide-isome 96.6 0.0012 3.9E-08 57.0 3.8 70 241-348 24-94 (133)
168 2i1u_A Thioredoxin, TRX, MPT46 96.6 0.0029 1E-07 53.3 6.1 69 241-350 29-98 (121)
169 3p2a_A Thioredoxin 2, putative 96.6 0.0027 9.3E-08 56.2 6.0 70 240-350 53-123 (148)
170 1ti3_A Thioredoxin H, PTTRXH1; 96.6 0.0033 1.1E-07 52.2 6.1 68 241-350 25-93 (113)
171 2ppt_A Thioredoxin-2; thiredox 96.6 0.0021 7.4E-08 58.4 5.3 69 241-350 63-132 (155)
172 1wou_A Thioredoxin -related pr 96.6 0.0024 8.2E-08 55.3 5.4 78 241-351 23-108 (123)
173 3hz4_A Thioredoxin; NYSGXRC, P 96.5 0.0022 7.5E-08 56.7 4.9 68 242-350 24-92 (140)
174 1faa_A Thioredoxin F; electron 96.5 0.0031 1.1E-07 53.8 5.4 71 239-350 34-105 (124)
175 3q6o_A Sulfhydryl oxidase 1; p 96.5 0.0037 1.2E-07 60.3 6.4 71 242-347 30-101 (244)
176 2vm1_A Thioredoxin, thioredoxi 96.5 0.0038 1.3E-07 52.2 5.7 68 241-350 27-95 (118)
177 4eo3_A Bacterioferritin comigr 96.4 0.0092 3.2E-07 61.4 9.5 100 229-350 11-116 (322)
178 2vim_A Thioredoxin, TRX; thior 96.4 0.0054 1.8E-07 50.0 5.9 69 240-350 17-86 (104)
179 3apq_A DNAJ homolog subfamily 96.3 0.0049 1.7E-07 58.2 6.4 69 240-349 112-181 (210)
180 3ph9_A Anterior gradient prote 96.3 0.00076 2.6E-08 62.4 0.6 44 330-377 95-138 (151)
181 1v98_A Thioredoxin; oxidoreduc 96.3 0.0067 2.3E-07 53.2 6.6 69 241-350 49-118 (140)
182 2dbc_A PDCL2, unnamed protein 96.3 0.0033 1.1E-07 55.7 4.6 65 241-350 29-94 (135)
183 2djj_A PDI, protein disulfide- 96.2 0.0044 1.5E-07 52.3 4.8 70 241-348 24-94 (121)
184 3ira_A Conserved protein; meth 96.2 0.0063 2.2E-07 57.7 6.3 81 237-351 34-120 (173)
185 3dxb_A Thioredoxin N-terminall 96.1 0.005 1.7E-07 58.9 5.0 69 241-350 29-98 (222)
186 3idv_A Protein disulfide-isome 95.9 0.0096 3.3E-07 56.2 5.8 72 241-350 146-218 (241)
187 1fo5_A Thioredoxin; disulfide 95.8 0.0099 3.4E-07 46.8 4.8 63 243-348 3-66 (85)
188 3uem_A Protein disulfide-isome 95.8 0.032 1.1E-06 56.5 9.7 151 242-440 135-310 (361)
189 1a8l_A Protein disulfide oxido 95.8 0.014 4.7E-07 54.9 6.4 73 240-349 132-205 (226)
190 3apo_A DNAJ homolog subfamily 95.7 0.025 8.6E-07 63.6 9.4 145 238-440 451-604 (780)
191 1nho_A Probable thioredoxin; b 95.5 0.012 4.1E-07 46.3 4.3 61 245-348 4-65 (85)
192 1wmj_A Thioredoxin H-type; str 95.5 0.0031 1.1E-07 53.8 0.8 68 241-350 35-103 (130)
193 2yj7_A LPBCA thioredoxin; oxid 94.4 0.0025 8.4E-08 51.8 0.0 69 241-350 18-87 (106)
194 3t58_A Sulfhydryl oxidase 1; o 95.3 0.02 6.8E-07 62.8 6.6 71 242-347 30-104 (519)
195 2es7_A Q8ZP25_salty, putative 95.3 0.026 8.9E-07 51.1 6.2 67 242-350 34-105 (142)
196 1a8l_A Protein disulfide oxido 95.1 0.098 3.3E-06 49.0 9.8 152 239-440 19-179 (226)
197 2dlx_A UBX domain-containing p 95.1 0.061 2.1E-06 49.8 8.1 25 326-350 92-117 (153)
198 3ed3_A Protein disulfide-isome 94.6 0.033 1.1E-06 56.2 5.5 74 241-352 34-108 (298)
199 3f8u_A Protein disulfide-isome 94.6 0.024 8.2E-07 59.8 4.5 68 241-347 369-437 (481)
200 2qsi_A Putative hydrogenase ex 94.1 0.18 6.1E-06 46.4 8.7 71 241-351 31-104 (137)
201 1a0r_P Phosducin, MEKA, PP33; 93.8 0.041 1.4E-06 54.8 4.1 67 241-350 132-199 (245)
202 4f82_A Thioredoxin reductase; 93.7 0.047 1.6E-06 52.1 4.2 104 233-352 37-155 (176)
203 2trc_P Phosducin, MEKA, PP33; 93.7 0.1 3.5E-06 50.5 6.6 89 241-375 119-207 (217)
204 2ywm_A Glutaredoxin-like prote 93.3 0.12 4.1E-06 48.8 6.2 65 240-348 134-199 (229)
205 3dml_A Putative uncharacterize 93.0 0.009 3.1E-07 53.5 -2.0 74 241-350 17-90 (116)
206 3apo_A DNAJ homolog subfamily 92.9 0.059 2E-06 60.6 4.1 68 241-349 674-742 (780)
207 2hls_A Protein disulfide oxido 92.7 0.15 5E-06 49.8 6.0 72 239-349 135-207 (243)
208 2qgv_A Hydrogenase-1 operon pr 92.6 0.29 9.9E-06 45.1 7.5 70 241-350 33-105 (140)
209 2e7p_A Glutaredoxin; thioredox 92.3 0.15 5.2E-06 42.8 4.9 24 324-350 62-85 (116)
210 3qcp_A QSOX from trypanosoma b 92.2 0.16 5.6E-06 55.3 6.2 71 241-347 41-116 (470)
211 3f8u_A Protein disulfide-isome 91.7 0.099 3.4E-06 55.1 3.7 66 242-348 21-87 (481)
212 3uem_A Protein disulfide-isome 91.4 0.18 6.1E-06 51.0 5.2 65 241-345 266-331 (361)
213 1ilo_A Conserved hypothetical 91.3 0.35 1.2E-05 37.3 5.7 60 246-351 3-63 (77)
214 3iv4_A Putative oxidoreductase 91.1 0.39 1.3E-05 42.8 6.4 72 242-351 24-96 (112)
215 3kp8_A Vkorc1/thioredoxin doma 90.5 0.031 1.1E-06 48.0 -1.3 36 235-271 5-41 (106)
216 2ywm_A Glutaredoxin-like prote 90.3 3.8 0.00013 38.3 12.9 40 400-440 135-176 (229)
217 1v5n_A PDI-like hypothetical p 89.9 0.066 2.3E-06 45.8 0.3 19 361-379 1-19 (89)
218 2r2j_A Thioredoxin domain-cont 89.1 0.38 1.3E-05 49.6 5.3 73 241-349 21-95 (382)
219 1eej_A Thiol:disulfide interch 89.0 1.7 6E-05 41.2 9.6 97 239-349 83-193 (216)
220 2b5e_A Protein disulfide-isome 88.8 0.56 1.9E-05 49.9 6.5 67 241-347 30-97 (504)
221 1sji_A Calsequestrin 2, calseq 88.5 0.66 2.3E-05 47.0 6.6 74 241-349 27-102 (350)
222 1o73_A Tryparedoxin; electron 87.5 0.89 3E-05 39.0 5.9 52 400-451 27-82 (144)
223 1i5g_A Tryparedoxin II; electr 87.3 0.69 2.4E-05 39.9 5.1 52 400-451 27-82 (144)
224 1o8x_A Tryparedoxin, TRYX, TXN 87.2 0.72 2.5E-05 40.0 5.1 52 400-451 27-82 (146)
225 4fo5_A Thioredoxin-like protei 86.9 0.72 2.5E-05 39.8 5.0 52 400-451 31-85 (143)
226 1v58_A Thiol:disulfide interch 86.8 3.6 0.00012 39.9 10.4 101 240-348 95-212 (241)
227 3q6o_A Sulfhydryl oxidase 1; p 86.5 0.34 1.2E-05 46.4 2.9 45 304-352 178-222 (244)
228 3s9f_A Tryparedoxin; thioredox 85.7 0.89 3E-05 41.0 5.1 52 400-451 47-102 (165)
229 3gyk_A 27KDA outer membrane pr 84.2 1.8 6.3E-05 38.8 6.5 51 230-287 10-61 (175)
230 2k8s_A Thioredoxin; dimer, str 83.7 1.5 5.1E-05 34.7 5.0 18 329-349 49-66 (80)
231 2b5e_A Protein disulfide-isome 82.7 0.39 1.3E-05 51.1 1.5 68 241-348 375-443 (504)
232 2av4_A Thioredoxin-like protei 82.5 1 3.5E-05 42.6 4.1 68 242-349 41-108 (160)
233 3evi_A Phosducin-like protein 82.1 0.67 2.3E-05 40.7 2.6 87 242-376 23-109 (118)
234 3eur_A Uncharacterized protein 82.0 1.9 6.4E-05 37.1 5.4 53 400-452 30-88 (142)
235 3fkf_A Thiol-disulfide oxidore 81.3 2.5 8.7E-05 35.8 5.9 49 400-450 32-86 (148)
236 3lor_A Thiol-disulfide isomera 80.9 2.3 7.7E-05 37.0 5.6 53 400-452 29-91 (160)
237 3ga4_A Dolichyl-diphosphooligo 80.6 2.1 7.2E-05 40.7 5.6 22 327-348 95-116 (178)
238 3us3_A Calsequestrin-1; calciu 79.8 2 6.8E-05 44.2 5.6 73 241-349 29-104 (367)
239 2lrn_A Thiol:disulfide interch 79.8 2.3 8E-05 36.9 5.3 52 400-451 28-82 (152)
240 3hcz_A Possible thiol-disulfid 79.5 1.5 5.2E-05 37.2 3.9 52 400-453 30-86 (148)
241 1t3b_A Thiol:disulfide interch 78.8 4.1 0.00014 38.6 7.0 95 241-349 85-193 (211)
242 2xhf_A Peroxiredoxin 5; oxidor 77.8 4.9 0.00017 37.7 7.1 63 233-305 32-98 (171)
243 3tco_A Thioredoxin (TRXA-1); d 76.8 3.6 0.00012 33.1 5.2 47 398-444 18-66 (109)
244 2lrt_A Uncharacterized protein 76.8 2.7 9.3E-05 37.0 4.8 51 400-450 34-87 (152)
245 3gl3_A Putative thiol:disulfid 75.2 4.8 0.00016 34.5 5.9 52 400-451 27-81 (152)
246 1zzo_A RV1677; thioredoxin fol 75.1 4.4 0.00015 33.6 5.5 51 400-451 24-76 (136)
247 3fw2_A Thiol-disulfide oxidore 75.1 4.8 0.00016 34.8 5.9 52 400-451 32-89 (150)
248 3ha9_A Uncharacterized thiored 74.6 4 0.00014 35.9 5.3 40 400-440 36-77 (165)
249 1ttz_A Conserved hypothetical 74.2 6.8 0.00023 32.5 6.3 19 328-349 41-59 (87)
250 1nsw_A Thioredoxin, TRX; therm 74.0 5 0.00017 32.2 5.4 46 398-443 14-61 (105)
251 3die_A Thioredoxin, TRX; elect 73.4 6.4 0.00022 31.4 5.9 45 400-444 18-64 (106)
252 3ewl_A Uncharacterized conserv 73.3 4.9 0.00017 34.1 5.4 52 400-451 26-83 (142)
253 2i4a_A Thioredoxin; acidophIle 73.3 7 0.00024 31.2 6.1 44 399-442 18-63 (107)
254 4evm_A Thioredoxin family prot 73.2 8.4 0.00029 31.6 6.7 51 400-450 21-78 (138)
255 3kij_A Probable glutathione pe 73.0 6.1 0.00021 35.7 6.3 52 400-451 37-98 (180)
256 3raz_A Thioredoxin-related pro 73.0 3.2 0.00011 36.0 4.2 43 400-442 23-68 (151)
257 2trx_A Thioredoxin; electron t 72.6 7.8 0.00027 31.2 6.3 45 399-443 18-64 (108)
258 3ul3_B Thioredoxin, thioredoxi 72.3 5.6 0.00019 33.8 5.5 45 398-442 39-85 (128)
259 3or5_A Thiol:disulfide interch 72.2 7.7 0.00026 33.6 6.5 52 400-451 33-87 (165)
260 2f9s_A Thiol-disulfide oxidore 72.2 6.7 0.00023 33.7 6.1 52 400-451 25-79 (151)
261 3cmi_A Peroxiredoxin HYR1; thi 71.7 3.7 0.00013 36.7 4.4 40 400-440 31-73 (171)
262 1xiy_A Peroxiredoxin, pfaop; a 71.3 4.7 0.00016 38.0 5.3 100 233-352 33-151 (182)
263 2lja_A Putative thiol-disulfid 71.2 3.5 0.00012 35.4 4.1 51 400-450 29-82 (152)
264 2hze_A Glutaredoxin-1; thiored 71.1 4.8 0.00016 34.2 4.8 26 322-350 62-87 (114)
265 1dby_A Chloroplast thioredoxin 71.1 6.7 0.00023 31.6 5.5 46 399-444 17-64 (107)
266 1t00_A Thioredoxin, TRX; redox 71.0 6.7 0.00023 31.9 5.5 46 399-444 21-68 (112)
267 2yzu_A Thioredoxin; redox prot 71.0 5.6 0.00019 31.7 5.0 45 398-442 15-61 (109)
268 1ego_A Glutaredoxin; electron 70.6 5.1 0.00017 31.3 4.5 66 246-350 3-70 (85)
269 3erw_A Sporulation thiol-disul 70.3 7.6 0.00026 32.6 5.9 42 400-441 33-77 (145)
270 1xwb_A Thioredoxin; dimerizati 70.2 9.5 0.00032 30.4 6.2 44 400-443 19-64 (106)
271 3kh7_A Thiol:disulfide interch 70.1 3.8 0.00013 37.1 4.2 50 400-452 57-108 (176)
272 1thx_A Thioredoxin, thioredoxi 70.0 6.5 0.00022 31.9 5.2 46 399-444 23-70 (115)
273 1w4v_A Thioredoxin, mitochondr 69.7 7.1 0.00024 32.7 5.6 45 399-443 29-75 (119)
274 3f3q_A Thioredoxin-1; His TAG, 69.6 7.4 0.00025 32.1 5.6 44 398-442 21-66 (109)
275 2p31_A CL683, glutathione pero 69.0 7 0.00024 35.4 5.7 42 400-441 48-92 (181)
276 1lu4_A Soluble secreted antige 68.5 7.6 0.00026 32.3 5.5 51 400-451 23-75 (136)
277 1syr_A Thioredoxin; SGPP, stru 68.2 6.9 0.00024 32.2 5.1 44 398-442 23-68 (112)
278 2lus_A Thioredoxion; CR-Trp16, 71.2 1.1 3.7E-05 38.2 0.0 50 399-450 23-80 (143)
279 1fb6_A Thioredoxin M; electron 67.8 8.7 0.0003 30.5 5.5 44 400-443 17-62 (105)
280 2b1k_A Thiol:disulfide interch 67.2 6.9 0.00023 34.4 5.1 50 399-451 49-100 (168)
281 2vup_A Glutathione peroxidase- 67.1 8.1 0.00028 35.3 5.8 42 400-441 47-91 (190)
282 4euy_A Uncharacterized protein 67.1 4.4 0.00015 33.0 3.6 45 398-443 15-61 (105)
283 3kcm_A Thioredoxin family prot 66.5 12 0.00042 32.0 6.6 51 400-450 27-81 (154)
284 2e0q_A Thioredoxin; electron t 66.5 9.1 0.00031 30.1 5.3 46 398-444 13-60 (104)
285 2p5q_A Glutathione peroxidase 65.8 6.7 0.00023 34.3 4.8 41 400-440 31-74 (170)
286 3hxs_A Thioredoxin, TRXP; elec 65.7 8.1 0.00028 33.0 5.2 45 400-444 50-96 (141)
287 2i1u_A Thioredoxin, TRX, MPT46 65.3 9.6 0.00033 31.3 5.4 45 399-443 28-74 (121)
288 2l5l_A Thioredoxin; structural 65.3 9.7 0.00033 32.7 5.6 44 399-442 36-81 (136)
289 3p2a_A Thioredoxin 2, putative 65.2 9.1 0.00031 33.2 5.5 47 398-444 52-100 (148)
290 3gnj_A Thioredoxin domain prot 64.6 10 0.00035 30.6 5.4 45 399-443 20-66 (111)
291 3fk8_A Disulphide isomerase; A 64.0 4.1 0.00014 34.6 2.9 41 399-439 27-71 (133)
292 3hz4_A Thioredoxin; NYSGXRC, P 64.0 9.4 0.00032 33.0 5.3 47 398-444 21-69 (140)
293 2obi_A PHGPX, GPX-4, phospholi 63.5 11 0.00037 34.0 5.8 41 400-440 46-89 (183)
294 2l57_A Uncharacterized protein 63.3 8.1 0.00028 32.4 4.6 41 398-438 23-65 (126)
295 2o8v_B Thioredoxin 1; disulfid 63.1 8.9 0.0003 32.9 5.0 44 399-442 38-83 (128)
296 3t58_A Sulfhydryl oxidase 1; o 62.9 6 0.0002 43.2 4.6 83 276-368 155-241 (519)
297 3lwa_A Secreted thiol-disulfid 62.5 6.4 0.00022 35.3 4.1 53 400-452 58-120 (183)
298 2vim_A Thioredoxin, TRX; thior 62.1 12 0.00041 29.6 5.3 43 400-443 18-62 (104)
299 1kng_A Thiol:disulfide interch 61.9 9.3 0.00032 32.7 4.9 50 400-451 41-92 (156)
300 1ti3_A Thioredoxin H, PTTRXH1; 61.1 18 0.0006 29.2 6.2 44 400-444 25-70 (113)
301 2voc_A Thioredoxin; electron t 60.9 8.3 0.00028 31.8 4.2 43 400-442 16-60 (112)
302 3aps_A DNAJ homolog subfamily 60.8 13 0.00044 30.8 5.4 46 399-444 19-66 (122)
303 1ep7_A Thioredoxin CH1, H-type 60.4 11 0.00036 30.6 4.7 44 401-444 24-69 (112)
304 3eyt_A Uncharacterized protein 60.1 14 0.00049 31.8 5.8 52 400-451 27-88 (158)
305 1xfl_A Thioredoxin H1; AT3G510 59.6 18 0.00061 30.7 6.2 44 400-444 37-82 (124)
306 2oe3_A Thioredoxin-3; electron 59.4 11 0.00038 31.5 4.8 46 398-444 27-74 (114)
307 1zma_A Bacterocin transport ac 59.3 11 0.00039 31.2 4.8 41 398-440 26-68 (118)
308 2v1m_A Glutathione peroxidase; 59.3 13 0.00046 32.3 5.5 41 400-440 30-73 (169)
309 2vlu_A Thioredoxin, thioredoxi 58.6 14 0.00047 30.6 5.2 43 400-443 33-77 (122)
310 1kte_A Thioltransferase; redox 58.5 12 0.00042 30.5 4.8 26 322-350 55-80 (105)
311 1z6n_A Hypothetical protein PA 57.9 5.7 0.00019 36.8 2.9 48 400-448 53-102 (167)
312 3m9j_A Thioredoxin; oxidoreduc 57.7 17 0.00057 28.9 5.4 44 400-444 19-64 (105)
313 2b5x_A YKUV protein, TRXY; thi 57.4 16 0.00053 30.7 5.4 43 399-441 27-71 (148)
314 3dwv_A Glutathione peroxidase- 56.9 6.6 0.00023 35.8 3.2 39 400-440 45-88 (187)
315 1x5d_A Protein disulfide-isome 56.8 14 0.00047 30.9 4.9 44 399-442 23-72 (133)
316 3c1r_A Glutaredoxin-1; oxidize 56.7 9.4 0.00032 32.9 4.0 67 246-349 27-93 (118)
317 2djk_A PDI, protein disulfide- 55.9 21 0.00073 30.7 6.2 68 242-349 23-93 (133)
318 3gix_A Thioredoxin-like protei 55.8 12 0.00041 33.2 4.6 46 399-444 21-68 (149)
319 2l5o_A Putative thioredoxin; s 55.6 15 0.00052 31.3 5.1 51 400-450 27-81 (153)
320 1jfu_A Thiol:disulfide interch 55.4 25 0.00085 31.4 6.7 52 400-451 59-114 (186)
321 2ls5_A Uncharacterized protein 60.3 2.5 8.5E-05 37.0 0.0 51 400-450 32-87 (159)
322 2dj1_A Protein disulfide-isome 54.7 13 0.00043 31.6 4.4 44 398-441 31-79 (140)
323 1hyu_A AHPF, alkyl hydroperoxi 54.2 19 0.00064 38.7 6.6 71 238-351 113-183 (521)
324 3qfa_C Thioredoxin; protein-pr 53.7 17 0.00059 30.2 5.1 44 400-444 30-75 (116)
325 2vm1_A Thioredoxin, thioredoxi 52.9 17 0.0006 29.5 4.9 41 400-441 27-69 (118)
326 2j23_A Thioredoxin; immune pro 52.8 9.2 0.00032 32.1 3.2 47 398-444 30-79 (121)
327 2f51_A Thioredoxin; electron t 52.5 20 0.00067 30.1 5.2 42 399-441 21-64 (118)
328 1qgv_A Spliceosomal protein U5 52.1 12 0.00039 33.1 3.9 42 400-441 22-65 (142)
329 3d6i_A Monothiol glutaredoxin- 51.7 14 0.00048 30.0 4.1 44 400-443 20-66 (112)
330 1gh2_A Thioredoxin-like protei 50.6 23 0.00079 28.5 5.2 43 399-442 19-63 (107)
331 2gs3_A PHGPX, GPX-4, phospholi 50.5 24 0.00081 31.9 5.8 41 400-440 48-91 (185)
332 3na7_A HP0958; flagellar bioge 50.2 4.6 0.00016 40.0 1.0 28 563-591 201-232 (256)
333 3drn_A Peroxiredoxin, bacterio 49.7 15 0.00051 32.3 4.2 50 400-450 27-81 (161)
334 4hde_A SCO1/SENC family lipopr 49.3 22 0.00075 32.1 5.4 52 400-451 31-91 (170)
335 2dml_A Protein disulfide-isome 49.3 10 0.00035 31.7 3.0 46 399-444 33-80 (130)
336 2ju5_A Thioredoxin disulfide i 48.6 15 0.00051 32.5 4.0 43 399-441 45-93 (154)
337 3d22_A TRXH4, thioredoxin H-ty 47.5 22 0.00076 30.1 4.9 43 400-443 45-89 (139)
338 2xc2_A Thioredoxinn; oxidoredu 47.3 24 0.0008 29.0 4.8 42 400-443 32-75 (117)
339 2bmx_A Alkyl hydroperoxidase C 47.1 22 0.00074 32.5 5.0 48 400-450 44-97 (195)
340 2ppt_A Thioredoxin-2; thiredox 47.1 17 0.00057 32.4 4.1 45 398-442 61-107 (155)
341 2ht9_A Glutaredoxin-2; thiored 45.9 16 0.00056 32.9 3.9 26 322-350 89-114 (146)
342 3hdc_A Thioredoxin family prot 45.7 19 0.00065 31.3 4.2 42 400-441 40-84 (158)
343 2hls_A Protein disulfide oxido 44.3 1.1E+02 0.0038 29.2 9.8 26 400-425 137-163 (243)
344 2ggt_A SCO1 protein homolog, m 44.2 24 0.00081 30.5 4.6 43 400-442 22-72 (164)
345 2l6c_A Thioredoxin; oxidoreduc 43.9 23 0.00078 29.1 4.2 42 398-440 16-59 (110)
346 2cvb_A Probable thiol-disulfid 43.5 18 0.0006 32.5 3.7 41 400-441 32-75 (188)
347 1xzo_A BSSCO, hypothetical pro 43.4 13 0.00046 32.5 2.8 49 400-450 32-91 (174)
348 1qmv_A Human thioredoxin perox 43.2 27 0.00094 31.9 5.0 52 400-452 33-88 (197)
349 2cq9_A GLRX2 protein, glutared 43.0 69 0.0024 27.7 7.4 26 322-350 67-92 (130)
350 1xvw_A Hypothetical protein RV 42.8 31 0.001 29.9 5.1 50 400-450 34-88 (160)
351 1r26_A Thioredoxin; redox-acti 42.7 25 0.00086 30.0 4.4 45 398-443 34-80 (125)
352 1r7h_A NRDH-redoxin; thioredox 42.6 53 0.0018 24.5 5.9 16 330-348 45-60 (75)
353 3dxb_A Thioredoxin N-terminall 42.5 28 0.00097 32.6 5.1 48 398-445 27-76 (222)
354 3zzx_A Thioredoxin; oxidoreduc 42.4 30 0.001 28.9 4.8 44 400-444 19-64 (105)
355 1wou_A Thioredoxin -related pr 42.0 44 0.0015 28.1 5.8 41 400-440 23-72 (123)
356 3gv1_A Disulfide interchange p 41.9 80 0.0027 28.4 7.9 94 240-348 12-120 (147)
357 2h30_A Thioredoxin, peptide me 41.8 31 0.0011 29.7 5.0 42 399-440 36-80 (164)
358 2k6v_A Putative cytochrome C o 41.8 20 0.00067 31.3 3.6 42 400-441 34-82 (172)
359 1z6m_A Conserved hypothetical 41.3 23 0.0008 31.5 4.2 56 228-287 13-69 (175)
360 2rli_A SCO2 protein homolog, m 40.9 35 0.0012 29.7 5.2 51 400-450 25-86 (171)
361 3hd5_A Thiol:disulfide interch 40.4 31 0.0011 31.3 5.0 42 240-287 23-65 (195)
362 3uvt_A Thioredoxin domain-cont 39.6 54 0.0018 26.0 5.8 44 401-444 21-69 (111)
363 2pn8_A Peroxiredoxin-4; thiore 39.6 36 0.0012 31.9 5.4 53 400-453 47-103 (211)
364 3ztl_A Thioredoxin peroxidase; 39.6 51 0.0018 31.0 6.5 53 400-453 68-124 (222)
365 2pu9_C TRX-F, thioredoxin F-ty 39.3 49 0.0017 26.7 5.5 40 400-440 23-64 (111)
366 3pwf_A Rubrerythrin; non heme 38.8 13 0.00045 35.0 2.1 27 564-597 143-169 (170)
367 1h75_A Glutaredoxin-like prote 38.5 52 0.0018 25.2 5.3 15 331-348 46-60 (81)
368 2fwh_A Thiol:disulfide interch 38.5 46 0.0016 28.3 5.5 42 400-442 30-76 (134)
369 1uul_A Tryparedoxin peroxidase 38.5 36 0.0012 31.2 5.1 51 400-451 35-89 (202)
370 2yj7_A LPBCA thioredoxin; oxid 44.2 6.8 0.00023 31.0 0.0 43 399-441 17-61 (106)
371 1v98_A Thioredoxin; oxidoreduc 37.9 59 0.002 27.6 6.1 43 400-443 50-94 (140)
372 2dj3_A Protein disulfide-isome 37.6 48 0.0016 27.6 5.3 41 400-440 24-68 (133)
373 1we0_A Alkyl hydroperoxide red 36.5 31 0.0011 31.0 4.3 40 400-441 30-75 (187)
374 2rem_A Disulfide oxidoreductas 35.9 40 0.0014 30.3 4.9 43 239-287 22-65 (193)
375 1faa_A Thioredoxin F; electron 35.6 54 0.0019 27.0 5.3 40 400-440 36-77 (124)
376 2djj_A PDI, protein disulfide- 35.6 35 0.0012 27.9 4.1 42 399-440 23-71 (121)
377 1zof_A Alkyl hydroperoxide-red 35.1 17 0.00059 33.2 2.3 53 400-453 32-88 (198)
378 3ia1_A THIO-disulfide isomeras 35.1 42 0.0014 28.6 4.6 47 402-450 31-81 (154)
379 2jsy_A Probable thiol peroxida 34.8 26 0.00087 30.8 3.3 42 400-442 43-87 (167)
380 3u5r_E Uncharacterized protein 34.4 45 0.0015 31.2 5.1 42 400-441 57-102 (218)
381 3mhs_C SAGA-associated factor 34.2 37 0.0013 29.8 4.0 16 577-592 66-81 (99)
382 2ywi_A Hypothetical conserved 34.2 30 0.001 31.0 3.7 41 400-440 44-88 (196)
383 3me7_A Putative uncharacterize 34.1 29 0.00099 31.1 3.6 42 400-441 27-74 (170)
384 2lst_A Thioredoxin; structural 39.4 9 0.00031 32.2 0.0 43 398-440 16-63 (130)
385 3f9u_A Putative exported cytoc 33.1 21 0.00071 31.7 2.4 44 399-442 45-93 (172)
386 2f8a_A Glutathione peroxidase 32.7 45 0.0015 31.3 4.8 39 400-440 46-89 (208)
387 2dj0_A Thioredoxin-related tra 32.2 26 0.00089 29.9 2.8 42 400-441 25-69 (137)
388 2znm_A Thiol:disulfide interch 31.9 52 0.0018 29.7 4.9 41 241-287 21-62 (195)
389 2hyx_A Protein DIPZ; thioredox 31.9 41 0.0014 34.8 4.7 41 400-440 81-124 (352)
390 3h79_A Thioredoxin-like protei 31.6 61 0.0021 27.0 5.0 45 400-444 32-83 (127)
391 3cxg_A Putative thioredoxin; m 31.5 47 0.0016 28.4 4.4 40 400-441 39-80 (133)
392 2wz9_A Glutaredoxin-3; protein 31.4 61 0.0021 28.3 5.2 43 401-444 32-76 (153)
393 2c0d_A Thioredoxin peroxidase 31.1 33 0.0011 32.7 3.6 51 400-453 55-111 (221)
394 3ixr_A Bacterioferritin comigr 31.0 76 0.0026 28.6 5.9 43 400-442 50-96 (179)
395 2qc7_A ERP31, ERP28, endoplasm 30.9 58 0.002 31.9 5.4 21 326-347 72-94 (240)
396 2i81_A 2-Cys peroxiredoxin; st 30.4 35 0.0012 32.1 3.6 51 400-451 51-105 (213)
397 1wmj_A Thioredoxin H-type; str 29.8 13 0.00046 30.8 0.5 44 400-444 35-80 (130)
398 1mek_A Protein disulfide isome 29.7 15 0.0005 29.8 0.7 43 398-440 21-68 (120)
399 3apq_A DNAJ homolog subfamily 29.4 64 0.0022 29.7 5.2 47 398-444 111-159 (210)
400 3q87_A Putative uncharacterize 29.4 15 0.00052 33.4 0.8 14 578-591 96-109 (125)
401 2h01_A 2-Cys peroxiredoxin; th 29.1 27 0.00091 31.7 2.5 52 400-452 30-85 (192)
402 2k8s_A Thioredoxin; dimer, str 28.9 87 0.003 24.2 5.2 38 403-440 3-41 (80)
403 3gkn_A Bacterioferritin comigr 27.7 74 0.0025 27.5 5.0 50 400-450 34-87 (163)
404 3qou_A Protein YBBN; thioredox 27.6 27 0.00092 33.6 2.3 45 400-444 25-71 (287)
405 3ira_A Conserved protein; meth 27.1 31 0.0011 32.3 2.5 43 398-440 36-83 (173)
406 2jrp_A Putative cytoplasmic pr 27.0 20 0.00068 30.4 1.1 18 577-594 27-44 (81)
407 1sen_A Thioredoxin-like protei 26.4 12 0.0004 33.8 -0.5 43 398-440 43-87 (164)
408 1zye_A Thioredoxin-dependent p 26.1 53 0.0018 30.9 4.0 50 400-450 55-108 (220)
409 3msz_A Glutaredoxin 1; alpha-b 25.6 72 0.0025 24.6 4.2 33 246-287 6-38 (89)
410 1lko_A Rubrerythrin all-iron(I 25.1 21 0.0007 34.0 0.9 25 564-595 160-185 (191)
411 2b7k_A SCO1 protein; metalloch 24.6 70 0.0024 29.3 4.5 51 400-450 40-100 (200)
412 4ayb_P DNA-directed RNA polyme 24.3 36 0.0012 26.2 1.9 24 564-589 8-31 (48)
413 1xvq_A Thiol peroxidase; thior 24.2 38 0.0013 30.3 2.5 42 400-443 43-87 (175)
414 1oaz_A Thioredoxin 1; immune s 24.1 18 0.00061 30.8 0.3 43 399-441 19-77 (123)
415 1wjk_A C330018D20RIK protein; 24.0 46 0.0016 27.6 2.8 38 241-287 14-51 (100)
416 2yzh_A Probable thiol peroxida 23.6 1.2E+02 0.004 26.7 5.6 49 400-450 46-97 (171)
417 1lv3_A Hypothetical protein YA 23.6 29 0.00098 28.5 1.4 14 579-592 7-20 (68)
418 2kuc_A Putative disulphide-iso 23.3 54 0.0019 27.2 3.2 42 399-440 25-71 (130)
419 1dl6_A Transcription factor II 23.2 29 0.001 27.1 1.3 13 577-589 7-19 (58)
420 2lcq_A Putative toxin VAPC6; P 23.2 31 0.0011 31.6 1.7 24 564-593 137-160 (165)
421 3hd5_A Thiol:disulfide interch 23.0 3.6E+02 0.012 24.1 9.0 41 400-440 24-66 (195)
422 3h93_A Thiol:disulfide interch 22.9 95 0.0032 28.0 5.0 42 241-287 24-65 (192)
423 3qpm_A Peroxiredoxin; oxidored 22.8 2.1E+02 0.0071 27.4 7.6 52 400-452 76-131 (240)
424 2dbc_A PDCL2, unnamed protein 22.6 87 0.003 26.8 4.4 40 400-440 29-70 (135)
425 1psq_A Probable thiol peroxida 22.3 1.3E+02 0.0044 26.3 5.6 42 400-442 41-85 (163)
426 3p7x_A Probable thiol peroxida 22.0 1E+02 0.0035 27.1 4.9 41 400-442 45-88 (166)
427 3hvm_A Agmatine deiminase; hyd 21.6 72 0.0025 33.2 4.3 108 240-362 209-321 (330)
428 1nho_A Probable thioredoxin; b 21.6 68 0.0023 24.2 3.2 38 406-443 6-45 (85)
429 2dlx_A UBX domain-containing p 21.1 55 0.0019 29.8 2.9 42 399-440 40-86 (153)
430 2jsp_A Transcriptional regulat 20.9 30 0.001 29.7 1.0 18 575-592 15-32 (87)
431 1dx8_A Rubredoxin; electron tr 20.8 43 0.0015 27.4 1.9 21 576-596 35-55 (70)
432 3r8s_0 50S ribosomal protein L 20.4 36 0.0012 26.7 1.3 14 578-591 24-37 (56)
No 1
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.50 E-value=5.4e-14 Score=129.47 Aligned_cols=128 Identities=16% Similarity=0.283 Sum_probs=106.4
Q ss_pred ccccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhh
Q 039432 227 LIAMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFS 305 (598)
Q Consensus 227 L~~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~ 305 (598)
|...+| .+.++.++||.|+|+|.+.|| +|..+.+. |.++|+++. ...+++||.|++ |.+++.+..+.
T Consensus 34 l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~-l~~l~~~~~---~~~~v~vv~v~~-------d~~~~~~~~~~ 101 (165)
T 3s9f_A 34 LRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQ-LVEFYEKHH---DSKNFEIILASW-------DEEEDDFNAYY 101 (165)
T ss_dssp EEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHH-HHHHHHHHT---TTTTEEEEEEEC-------CCSHHHHHHHH
T ss_pred eecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHH-HHHHHHHhc---cCCCeEEEEEec-------CCCHHHHHHHH
Confidence 334566 999999999999999999998 56677777 999999983 234899999998 55677889999
Q ss_pred cCCCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCC-CceechhHHHHH-HHhCcCccCCCc
Q 039432 306 CSLPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQ-GMVTNSNALDMV-LIWGARGYPFSV 369 (598)
Q Consensus 306 ~~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pq-Gkv~~~nA~~mI-~~wG~~AfPFT~ 369 (598)
.+++|..+|+.. ......+.+.|++.++|+++++|++ |+++..++.+.+ .......|||..
T Consensus 102 ~~~~~~~~~~~~---~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~~~~~~~d~~~~~fpw~~ 164 (165)
T 3s9f_A 102 AKMPWLSIPFAN---RNIVEALTKKYSVESIPTLIGLNADTGDTVTTRARHALTQDPMGEQFPWRD 164 (165)
T ss_dssp TTCSSEECCTTC---HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred HhCCCcccccCc---hhHHHHHHHHcCCCCCCEEEEEeCCCCEEEecccHHHHhhCcccccCCCCC
Confidence 999999999965 3445788899999999999999998 999999998655 455567799864
No 2
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.45 E-value=3.7e-13 Score=119.06 Aligned_cols=126 Identities=13% Similarity=0.287 Sum_probs=105.5
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
..+|..+.++.++||.|+|+|.+.|| +|..+.+. |.++|+++. .+.+++||.|++ |.+.+....+...
T Consensus 15 ~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~-l~~l~~~~~---~~~~~~vv~v~~-------d~~~~~~~~~~~~ 83 (144)
T 1i5g_A 15 KGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQ-LIDFYKAHA---EKKNFEVMLISW-------DESAEDFKDYYAK 83 (144)
T ss_dssp ETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHH-HHHHHHHHT---TTTTEEEEEEEC-------CSSHHHHHHHHTT
T ss_pred cCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHH-HHHHHHHhc---cCCCEEEEEEeC-------CCCHHHHHHHHHh
Confidence 35677899999999999999999998 56677777 999999873 235899999998 5567788899999
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeC-CCCceechhHHHHHHHhCc-CccCCC
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLD-SQGMVTNSNALDMVLIWGA-RGYPFS 368 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~-pqGkv~~~nA~~mI~~wG~-~AfPFT 368 (598)
++|..+|+.. ......+.+.|+++++|+++++| ++|+++..++...+..-+. ..||++
T Consensus 84 ~~~~~~~~~~---~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~ 143 (144)
T 1i5g_A 84 MPWLALPFED---RKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQARTMVVKDPEAKDFPWP 143 (144)
T ss_dssp CSSEECCTTC---HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred CCccccccCc---hHHHHHHHHHcCCCCCCEEEEEECCCCcEEeccchhhhhhCcccccCCCC
Confidence 9999999863 24456788899999999999999 9999999999998888774 557775
No 3
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.42 E-value=8.8e-13 Score=116.06 Aligned_cols=125 Identities=16% Similarity=0.336 Sum_probs=103.7
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
..+| .+.+++++||.|+|+|.+.|| +|..+.+. |.++|+++. .+.+++|+.|++ |.+.+.+..+...
T Consensus 16 ~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~-l~~l~~~~~---~~~~~~vv~i~~-------d~~~~~~~~~~~~ 83 (144)
T 1o73_A 16 SKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPV-LAEFYEKHH---VAKNFEVVLISW-------DENESDFHDYYGK 83 (144)
T ss_dssp CTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHH-HHHHHHHHT---TTTTEEEEEEEC-------CSSHHHHHHHHTT
T ss_pred cCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHH-HHHHHHHhc---cCCCEEEEEEeC-------CCCHHHHHHHHHh
Confidence 4567 999999999999999999998 46677777 999999873 235899999998 5566788999999
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeC-CCCceechhHHHHHHHhCc-CccCCC
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLD-SQGMVTNSNALDMVLIWGA-RGYPFS 368 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~-pqGkv~~~nA~~mI~~wG~-~AfPFT 368 (598)
++|+.+|+.. ......+.+.|+++++|+++++| ++|+++...+...+..-+. ..||+.
T Consensus 84 ~~~~~~~~~~---~~~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~W~ 143 (144)
T 1o73_A 84 MPWLALPFDQ---RSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRVIEDPDGANFPWP 143 (144)
T ss_dssp CSSEECCTTC---HHHHHHHHHHHTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred CCceEeeccc---hhHHHHHHHHcCCCCCCEEEEEECCCCeEEecchhhHHhhCCCccCCCCC
Confidence 9999999863 34456778889999999999999 8999999999988776664 557764
No 4
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.42 E-value=4.9e-13 Score=118.76 Aligned_cols=126 Identities=21% Similarity=0.323 Sum_probs=104.2
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
..+| .+.+++++||.|+|+|.+.|| +|..+.+. |.++|+++. .+.+++|++|++ |.+++.+.++...
T Consensus 16 ~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~-l~~l~~~~~---~~~~~~vv~v~~-------d~~~~~~~~~~~~ 83 (146)
T 1o8x_A 16 RGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQ-LIEFYDKFH---ESKNFEVVFCTW-------DEEEDGFAGYFAK 83 (146)
T ss_dssp ETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHH-HHHHHHHHT---TTTTEEEEEEEC-------CCSHHHHHHHHTT
T ss_pred cCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHH-HHHHHHHhh---hcCCeEEEEEeC-------CCCHHHHHHHHHH
Confidence 3567 999999999999999999998 56677777 999999873 235899999998 5567789999999
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeC-CCCceechhHHHHHHHhC-cCccCCCc
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLD-SQGMVTNSNALDMVLIWG-ARGYPFSV 369 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~-pqGkv~~~nA~~mI~~wG-~~AfPFT~ 369 (598)
++|+.+|+.. ......+.+.|+++++|+++++| ++|+++..++...+..-+ ..+||+.+
T Consensus 84 ~~~~~~~~~~---~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~~ 144 (146)
T 1o8x_A 84 MPWLAVPFAQ---SEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRARATLVKDPEGEQFPWKD 144 (146)
T ss_dssp CSSEECCGGG---HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHTTCTTCTTTTCCC
T ss_pred CCceeeccch---hhHHHHHHHHhCCCCCCEEEEEECCCCeEEEecchhHHhhCCccccCCCCC
Confidence 9999999852 24456788899999999999999 899999999998776555 45688754
No 5
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.74 E-value=5e-12 Score=110.55 Aligned_cols=115 Identities=15% Similarity=0.224 Sum_probs=90.7
Q ss_pred cCCceeecce-ecCc-EEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 230 MKSEQLGVSE-LKDK-VVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 230 ~~~~kV~Is~-L~gK-~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
.+|..+.+++ ++|| .|+|+|.+.|| +|..+.+. |.++|++++ ..+.+++|+.|++ |.+.+....+..
T Consensus 12 ~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~-l~~~~~~~~--~~~~~~~v~~v~~-------d~~~~~~~~~~~ 81 (143)
T 2lus_A 12 KNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPI-LADMYSELV--DDSAPFEIIFVSS-------DRSEDDMFQYMM 81 (143)
Confidence 4677899999 9999 99999999998 56677777 899999873 2346899999998 334444454444
Q ss_pred C--CCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceechhHHHHHH
Q 039432 307 S--LPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNSNALDMVL 358 (598)
Q Consensus 307 ~--MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~ 358 (598)
. .+|..+|+.. ...+.+.+.|++.+.|+++++|++|+++..++...+.
T Consensus 82 ~~~~~~~~~~~~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~ 131 (143)
T 2lus_A 82 ESHGDWLAIPYRS----GPASNVTAKYGITGIPALVIVKKDGTLISMNGRGEVQ 131 (143)
Confidence 4 4899888854 3445677889999999999999999999998886554
No 6
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.07 E-value=1.5e-10 Score=102.30 Aligned_cols=107 Identities=6% Similarity=0.042 Sum_probs=77.8
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHh--hc
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELF--SC 306 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~--~~ 306 (598)
.+|..+.+++++||.|+|+|.+.|| +|..+++. |.++|++.. +.+++||.|++| .+.+....+ ..
T Consensus 20 ~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~-l~~l~~~~~----~~~~~vv~vs~d-------~~~~~~~~~~~~~ 87 (143)
T 4fo5_A 20 GNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQ-LANEVNKFG----PDKIAMCSISMD-------EKESIFTETVKID 87 (143)
T ss_dssp ----CCCSCCSSCCEEEEEEECTTCHHHHHHHHH-HHHHHTTSC----TTTEEEEEEECC-------SCHHHHHHHHHHH
T ss_pred CCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHH-HHHHHHHhC----cCCEEEEEEEcc-------CCHHHHHHHHHHh
Confidence 4677899999999999999999998 56677888 999999973 247999999983 223333332 24
Q ss_pred CCCe-eeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceechh
Q 039432 307 SLPW-YSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNSN 352 (598)
Q Consensus 307 ~MPW-yAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 352 (598)
.++| ..+..+. .....+.+.|+++++|+.+++|++|+++..+
T Consensus 88 ~~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (143)
T 4fo5_A 88 KLDLSTQFHEGL----GKESELYKKYDLRKGFKNFLINDEGVIIAAN 130 (143)
T ss_dssp TCCGGGEEECTT----GGGSHHHHHTTGGGCCCEEEECTTSBEEEES
T ss_pred CCCCceeeeccc----ccchHHHHHcCCCCCCcEEEECCCCEEEEcc
Confidence 6788 4444332 1124566778999999999999999998754
No 7
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.04 E-value=2.4e-10 Score=103.10 Aligned_cols=106 Identities=16% Similarity=0.328 Sum_probs=83.4
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCC
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSL 308 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~M 308 (598)
.+|..+.+++++||.|+|+|.+.|| +|..+++. |.++|++.. +.+++||.|++ |..++....+...+
T Consensus 23 ~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~-l~~l~~~~~----~~~~~vv~i~~-------d~~~~~~~~~~~~~ 90 (152)
T 2lrt_A 23 LKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLA-LRELYNKYA----SQGFEIYQISL-------DGDEHFWKTSADNL 90 (152)
T ss_dssp TTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHH-HHHHHHHHG----GGTEEEEEEEC-------SCCHHHHHHHHTTC
T ss_pred CCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHH-HHHHHHHhc----cCCeEEEEEEc-------cCCHHHHHHHHhCC
Confidence 4677999999999999999999998 55667787 999999984 23699999998 33345556666779
Q ss_pred CeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 309 PWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 309 PWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
||..+.-++ .....+.+.|++.+.|+.+++|++|+++..
T Consensus 91 ~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 129 (152)
T 2lrt_A 91 PWVCVRDAN----GAYSSYISLYNVTNLPSVFLVNRNNELSAR 129 (152)
T ss_dssp SSEEEECSS----GGGCHHHHHHTCCSCSEEEEEETTTEEEEE
T ss_pred CceEEECCC----CcchHHHHHcCcccCceEEEECCCCeEEEe
Confidence 988776543 212245677899999999999999999875
No 8
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.03 E-value=1.2e-10 Score=102.85 Aligned_cols=107 Identities=12% Similarity=0.154 Sum_probs=83.2
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHH---HhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHh
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQ---TYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELF 304 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~---iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~ 304 (598)
..+|..+.++.++||.|+|+|-+.|| +|..+++. |.+ +|++.+ +.+++||.|+. |.+++.+..+
T Consensus 18 ~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~-l~~~~~l~~~~~----~~~~~vi~i~~-------d~~~~~~~~~ 85 (142)
T 3eur_A 18 LDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEG-LKASPVINGFTA----AKKLKVLSIYP-------DEELDEWKKH 85 (142)
T ss_dssp ETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHH-HHHCHHHHHHHH----TTSEEEEEEEC-------SSCHHHHHHH
T ss_pred cCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHH-HhhhHHHHHHhc----cCCeEEEEEEc-------CCCHHHHHHH
Confidence 35778999999999999999999998 56788888 899 999974 25799999998 4445555555
Q ss_pred hcCC--CeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceechh
Q 039432 305 SCSL--PWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNSN 352 (598)
Q Consensus 305 ~~~M--PWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 352 (598)
...+ +|..+.- ......+.+.|++.++|+.+++|++|+++..+
T Consensus 86 ~~~~~~~~~~~~d-----~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (142)
T 3eur_A 86 RNDFAKEWTNGYD-----KELVIKNKNLYDLRAIPTLYLLDKNKTVLLKD 130 (142)
T ss_dssp GGGSCTTSEEEEC-----TTCHHHHTTCSCCTTCSEEEEECTTCBEEEEE
T ss_pred HHhcccccccccC-----ccchhhhhhhcCCCcCCeEEEECCCCcEEecC
Confidence 5444 5655433 33334567899999999999999999999764
No 9
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.99 E-value=1.7e-09 Score=96.42 Aligned_cols=109 Identities=13% Similarity=0.161 Sum_probs=81.5
Q ss_pred cCCceeecceecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCC
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSL 308 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~M 308 (598)
.+|..+.+++++||.|+|+|.+.||+ |..+.+. |.++|++.. +.+++|+.|++|. +.+.-++|-.- ..+
T Consensus 17 ~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~-l~~l~~~~~----~~~~~vv~v~~d~----~~~~~~~~~~~-~~~ 86 (152)
T 2lrn_A 17 LKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPY-LLKTYNAFK----DKGFTIYGVSTDR----REEDWKKAIEE-DKS 86 (152)
T ss_dssp SSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHH-HHHHHHHHT----TTTEEEEEEECCS----CHHHHHHHHHH-HTC
T ss_pred CCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHH-HHHHHHHhc----cCCeEEEEEEccC----CHHHHHHHHHH-hCC
Confidence 46779999999999999999999984 5566777 899999873 2469999999831 12222333332 367
Q ss_pred CeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceechh
Q 039432 309 PWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNSN 352 (598)
Q Consensus 309 PWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 352 (598)
||..+.-+ ......+.+.|++++.|+++++|++|+++...
T Consensus 87 ~~~~~~d~----~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 126 (152)
T 2lrn_A 87 YWNQVLLQ----KDDVKDVLESYCIVGFPHIILVDPEGKIVAKE 126 (152)
T ss_dssp CSEEEEEC----HHHHHHHHHHTTCCSSCEEEEECTTSEEEEEC
T ss_pred CCeEEecc----cchhHHHHHHhCCCcCCeEEEECCCCeEEEee
Confidence 77766543 23356678889999999999999999998764
No 10
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.94 E-value=3.7e-09 Score=94.21 Aligned_cols=106 Identities=13% Similarity=0.060 Sum_probs=80.3
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCC
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSL 308 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~M 308 (598)
.+|..+.+++++||.|+|+|.+.|| +|..+++. |.++|++++ +.+++||.|++|. .++-+.|-.- ..+
T Consensus 12 ~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~-l~~l~~~~~----~~~v~vv~v~~d~-----~~~~~~~~~~-~~~ 80 (151)
T 3raz_A 12 KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPA-MSKWYKAQK----KGSVDMVGIALDT-----SDNIGNFLKQ-TPV 80 (151)
T ss_dssp TTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHH-HHHHHHTSC----TTTEEEEEEESSC-----HHHHHHHHHH-SCC
T ss_pred cCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHH-HHHHHHHhc----cCCeEEEEEECCC-----hHHHHHHHHH-cCC
Confidence 5788999999999999999999998 56677788 999999973 4579999999842 3444455433 345
Q ss_pred CeeeeecCCcccHHHHHHHHHhhc--cCCccEEEEeCCCCceec
Q 039432 309 PWYSVRQPQLLNSAVVNLIKQEWN--FKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 309 PWyAVp~~~~i~~~~~r~ike~~~--~~~iP~LVvL~pqGkv~~ 350 (598)
+|..+.... ...+.+.+.|+ +.++|+.+++|++|+++.
T Consensus 81 ~~~~~~~~~----~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~ 120 (151)
T 3raz_A 81 SYPIWRYTG----ANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQ 120 (151)
T ss_dssp SSCEEEECC----SCHHHHHHTTTCCSCCSSEEEEEETTTTEEE
T ss_pred CCceEecCc----cchHHHHHHhCCccCCCCEEEEECCCCcEEE
Confidence 555554432 23455677888 999999999999999864
No 11
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.93 E-value=5.3e-10 Score=97.98 Aligned_cols=104 Identities=13% Similarity=0.155 Sum_probs=76.2
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHH---HhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhh
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQ---TYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFS 305 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~---iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~ 305 (598)
.+|..+.++.++||.|+|+|.+.|| +|..+++. |.+ +|++.. +.+++||.|++ |.+.+....+.
T Consensus 15 ~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~-l~~~~~l~~~~~----~~~~~~v~v~~-------d~~~~~~~~~~ 82 (142)
T 3ewl_A 15 VHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKL-FAEIPAFVEMVE----NGTLRVLAIYP-------DENREEWATKA 82 (142)
T ss_dssp TTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHH-HHTCHHHHHHHH----HTSEEEEEEEC-------SSCHHHHHHHH
T ss_pred CCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHH-HHHhHHHHHHhc----cCCeEEEEEEe-------cCCHHHHHHHH
Confidence 5677999999999999999999998 56677666 777 787763 24599999998 33444455554
Q ss_pred cC--CCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 306 CS--LPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 306 ~~--MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.. ++|..+.-+ ...-...+.|++.+.|+++++|++|+++.
T Consensus 83 ~~~~~~~~~~~d~-----~~~~~~~~~~~v~~~P~~~lid~~G~i~~ 124 (142)
T 3ewl_A 83 VYMPQGWIVGWNK-----AGDIRTRQLYDIRATPTIYLLDGRKRVIL 124 (142)
T ss_dssp TTSCTTCEEEECT-----TCHHHHTTCSCCCSSSEEEEECTTCBEEE
T ss_pred HHcCCCcceeeCC-----ccchhhHHHcCCCCCCeEEEECCCCCEEe
Confidence 44 455444332 22222245899999999999999999986
No 12
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.91 E-value=3.1e-09 Score=94.61 Aligned_cols=109 Identities=14% Similarity=0.200 Sum_probs=81.7
Q ss_pred ccCCceeecc--eecCcEEEEEEecCCC-C--ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHH
Q 039432 229 AMKSEQLGVS--ELKDKVVILLVSKPEL-L--PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFEL 303 (598)
Q Consensus 229 ~~~~~kV~Is--~L~gK~VlLyfSal~~-~--~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~ 303 (598)
..+|..+.++ .++||.|+|+|-+.|| + |..+++. |.++|++.. .+.+++||.|++| .+.+....
T Consensus 18 ~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~-l~~l~~~~~---~~~~~~~v~v~~d-------~~~~~~~~ 86 (150)
T 3fw2_A 18 NAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSE-LREIYKKYK---KNKYIGMLGISLD-------VDKQQWKD 86 (150)
T ss_dssp BTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHH-HHHHHHHHT---TCSSEEEEEEECC-------SCHHHHHH
T ss_pred CCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHH-HHHHHHHhc---cCCCeEEEEEEcC-------CCHHHHHH
Confidence 3567799999 9999999999999998 5 5677777 999999871 2346999999983 23333333
Q ss_pred hh--cCCCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceechh
Q 039432 304 FS--CSLPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNSN 352 (598)
Q Consensus 304 ~~--~~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 352 (598)
+. ..+||..+.-+. .....+.+.|++.+.|+++++|++|+++...
T Consensus 87 ~~~~~~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 133 (150)
T 3fw2_A 87 AIKRDTLDWEQVCDFG----GLNSEVAKQYSIYKIPANILLSSDGKILAKN 133 (150)
T ss_dssp HHHHTTCCSEEECCSC----GGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred HHHHhCCCceEEEcCc----ccchHHHHHcCCCccCeEEEECCCCEEEEcc
Confidence 33 356777665432 1234567788999999999999999998765
No 13
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.88 E-value=1.1e-08 Score=91.54 Aligned_cols=116 Identities=12% Similarity=0.084 Sum_probs=85.9
Q ss_pred ccCCceeecceecCcEEEEEEecCCCC--ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPELL--PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~~--~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
..+|..+.+++++||.|+|+|.+.||+ |..+++. |.++|+++.......+++||+|++|... -+.+.-++|-+-+
T Consensus 10 ~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~-l~~l~~~~~~~~~~~~~~vv~vs~d~~~-d~~~~~~~~~~~~- 86 (164)
T 2ggt_A 10 THTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEK-MIQVVDEIDSITTLPDLTPLFISIDPER-DTKEAIANYVKEF- 86 (164)
T ss_dssp ETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHH-HHHHHHHHHHSSSSCCEEEEEEESCTTT-CCHHHHHHHHHTT-
T ss_pred eCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHH-HHHHHHHHhhccCCCcEEEEEEEeCCCC-CCHHHHHHHHHHc-
Confidence 357789999999999999999999985 6677777 9999998842112258999999984311 0123345555533
Q ss_pred CCCeeeeecCCcccHHHHHHHHHhhccCCcc---------------EEEEeCCCCceech
Q 039432 307 SLPWYSVRQPQLLNSAVVNLIKQEWNFKEEP---------------IMVVLDSQGMVTNS 351 (598)
Q Consensus 307 ~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP---------------~LVvL~pqGkv~~~ 351 (598)
.++|..+.- +....+.+.+.|++...| +.+++|++|+++..
T Consensus 87 ~~~~~~l~~----~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 142 (164)
T 2ggt_A 87 SPKLVGLTG----TREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDY 142 (164)
T ss_dssp CSSCEEEEC----CHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEE
T ss_pred CCCeEEEeC----CHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEE
Confidence 468877754 235566788889999999 89999999999864
No 14
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.85 E-value=7.9e-09 Score=90.18 Aligned_cols=111 Identities=11% Similarity=0.128 Sum_probs=80.8
Q ss_pred ccCCceeecc--eecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhh
Q 039432 229 AMKSEQLGVS--ELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFS 305 (598)
Q Consensus 229 ~~~~~kV~Is--~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~ 305 (598)
..+|..+.++ .++||.|+|+|.+.|| +|..+.+. |.+++++.. .+.+++||.|++|. +.+.-++|-. .
T Consensus 18 ~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~-l~~l~~~~~---~~~~~~~v~v~~d~----~~~~~~~~~~-~ 88 (148)
T 3fkf_A 18 NEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAE-LKRLNKEYK---KNKNFAMLGISLDI----DREAWETAIK-K 88 (148)
T ss_dssp BTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHH-HHHHHHHTT---TCTTEEEEEEECCS----CHHHHHHHHH-H
T ss_pred CCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHH-HHHHHHHhc---CCCCeEEEEEECCC----CHHHHHHHHH-H
Confidence 3567789999 9999999999999997 57777787 899999862 23469999999832 1222233332 2
Q ss_pred cCCCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceechh
Q 039432 306 CSLPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNSN 352 (598)
Q Consensus 306 ~~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 352 (598)
..++|..+.-+. .....+.+.|++++.|+++++|++|+++...
T Consensus 89 ~~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 131 (148)
T 3fkf_A 89 DTLSWDQVCDFT----GLSSETAKQYAILTLPTNILLSPTGKILARD 131 (148)
T ss_dssp TTCCSEEECCSC----GGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred cCCCceEEEccC----CcchHHHHhcCCCCcCEEEEECCCCeEEEec
Confidence 456777665432 1134566788999999999999999998654
No 15
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.80 E-value=2.6e-08 Score=89.80 Aligned_cols=116 Identities=7% Similarity=0.053 Sum_probs=84.3
Q ss_pred ccCCceeecceecCcEEEEEEecCCCC--ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPELL--PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~~--~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
..+|..+.+++++||.|+|+|.+.||+ |..+++. |.++|+++.......+++||+|++|.... +.+.-+.|-+-+
T Consensus 13 ~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~-l~~l~~~~~~~~~~~~v~vv~is~d~~~d-~~~~~~~~~~~~- 89 (171)
T 2rli_A 13 DHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEK-LVQVVRQLEAEPGLPPVQPVFITVDPERD-DVEAMARYVQDF- 89 (171)
T ss_dssp ETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHH-HHHHHHHHHHSTTSCCEEEEEEESCSTTC-CHHHHHHHHHTT-
T ss_pred eCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHH-HHHHHHHHhhccCCCceEEEEEEECCCCC-CHHHHHHHHHHc-
Confidence 356778999999999999999999984 6677888 99999988311123589999999842110 123344554433
Q ss_pred CCCeeeeecCCcccHHHHHHHHHhhccCCcc---------------EEEEeCCCCceech
Q 039432 307 SLPWYSVRQPQLLNSAVVNLIKQEWNFKEEP---------------IMVVLDSQGMVTNS 351 (598)
Q Consensus 307 ~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP---------------~LVvL~pqGkv~~~ 351 (598)
..+|..+.-+ ....+.+.+.|++...| +.+++|++|+++..
T Consensus 90 ~~~~~~l~~~----~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 145 (171)
T 2rli_A 90 HPRLLGLTGS----TKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDY 145 (171)
T ss_dssp CTTCCEEECC----HHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEE
T ss_pred CCCeEEEeCC----HHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEE
Confidence 4677666542 34556677889999888 99999999999864
No 16
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.79 E-value=1.1e-09 Score=95.74 Aligned_cols=107 Identities=14% Similarity=0.162 Sum_probs=76.9
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCC
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSL 308 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~M 308 (598)
.+|..+.++.++||.|+|+|.+.|| +|..+.+. |.++|++.. +.+++||.|++|. +.+.-++|-.-+ .+
T Consensus 19 ~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~-l~~l~~~~~----~~~~~~v~v~~d~----~~~~~~~~~~~~-~~ 88 (148)
T 3hcz_A 19 TTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPK-LYDWWLKNR----AKGIQVYAANIER----KDEEWLKFIRSK-KI 88 (148)
T ss_dssp TTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHH-HHHHHHHHG----GGTEEEEEEECCS----SSHHHHHHHHHH-TC
T ss_pred CCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHH-HHHHHHHhc----cCCEEEEEEEecC----CHHHHHHHHHHc-CC
Confidence 4677899999999999999999997 56677777 999999984 2369999999831 112233333322 34
Q ss_pred C-eeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 309 P-WYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 309 P-WyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
+ |..+.-+ .....+.+.|++.+.|+++++|++|+++..
T Consensus 89 ~~~~~~~d~-----~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 127 (148)
T 3hcz_A 89 GGWLNVRDS-----KNHTDFKITYDIYATPVLYVLDKNKVIIAK 127 (148)
T ss_dssp TTSEEEECT-----TCCCCHHHHHCCCSSCEEEEECTTCBEEEE
T ss_pred CCceEEecc-----ccchhHHHhcCcCCCCEEEEECCCCcEEEe
Confidence 4 4444332 222336678899999999999999999864
No 17
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.79 E-value=5.8e-09 Score=92.15 Aligned_cols=107 Identities=11% Similarity=0.096 Sum_probs=79.0
Q ss_pred ccCCceeecceecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
..+|..+.+++++||.|+|+|.+.||+ |..+.+. |.++|++.. +.++.+|.|+.|. +++.-++|-. ...
T Consensus 17 ~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~-l~~l~~~~~----~~~~~~v~v~~d~----~~~~~~~~~~-~~~ 86 (152)
T 2lja_A 17 DINGKTVSLADLKGKYIYIDVWATWCGPCRGELPA-LKELEEKYA----GKDIHFVSLSCDK----NKKAWENMVT-KDQ 86 (152)
T ss_dssp ETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHH-HHHHHHHST----TSSEEEEEEECCS----CHHHHHHHHH-HHT
T ss_pred cCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHH-HHHHHHHhc----cCCeEEEEEEccC----cHHHHHHHHH-hcC
Confidence 356789999999999999999999984 5566777 899998863 3569999999832 1222233332 236
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
++|+.+.... ...+.+.|++.+.|+++++|++|+++..
T Consensus 87 ~~~~~~~~d~------~~~~~~~~~v~~~P~~~lid~~G~i~~~ 124 (152)
T 2lja_A 87 LKGIQLHMGT------DRTFMDAYLINGIPRFILLDRDGKIISA 124 (152)
T ss_dssp CCSEEEECSS------CTHHHHHTTCCSSCCEEEECTTSCEEES
T ss_pred CCCceeecCc------chhHHHHcCcCCCCEEEEECCCCeEEEc
Confidence 7787666532 2345667899999999999999999874
No 18
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.77 E-value=5.7e-09 Score=92.19 Aligned_cols=104 Identities=14% Similarity=0.131 Sum_probs=74.6
Q ss_pred CCceeecceecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCC
Q 039432 231 KSEQLGVSELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLP 309 (598)
Q Consensus 231 ~~~kV~Is~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MP 309 (598)
+|+.+.++.++||.|+|+|.+.||+ |..+.+. |.++++++. +.+++||.|++|. +.++-++|-.- ...+
T Consensus 17 ~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~-l~~l~~~~~----~~~~~~v~v~~d~----~~~~~~~~~~~-~~~~ 86 (152)
T 3gl3_A 17 KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPW-MNQMQAKYK----AKGFQVVAVNLDA----KTGDAMKFLAQ-VPAE 86 (152)
T ss_dssp SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHH-HHHHHHHHG----GGTEEEEEEECCS----SHHHHHHHHHH-SCCC
T ss_pred CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHH-HHHHHHHhh----cCCeEEEEEECCC----CHHHHHHHHHH-cCCC
Confidence 7779999999999999999999985 5566666 899999873 2359999999832 12222233222 2234
Q ss_pred eeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 310 WYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 310 WyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
|..+.-++ ..+.+.|++.+.|+++++|++|+++..
T Consensus 87 ~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (152)
T 3gl3_A 87 FTVAFDPK-------GQTPRLYGVKGMPTSFLIDRNGKVLLQ 121 (152)
T ss_dssp SEEEECTT-------CHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred CceeECCc-------chhHHHcCCCCCCeEEEECCCCCEEEE
Confidence 44333322 246788899999999999999999854
No 19
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.74 E-value=5.1e-08 Score=87.53 Aligned_cols=118 Identities=12% Similarity=0.232 Sum_probs=79.2
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCC---CCCCChHhHHHH--H
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISS---SETWTDVEERNF--E 302 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~---~~~W~D~de~~F--e 302 (598)
..+|..+.+++++||.|+|+|.+.|| +|..+++. |.++|+++. +.+++||.|++|. -+.++.+.-++| +
T Consensus 18 ~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~-l~~l~~~~~----~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~ 92 (169)
T 2v1m_A 18 DINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQ-LQEMHTRLV----GKGLRILAFPCNQFGGQEPWAEAEIKKFVTE 92 (169)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHH-HHHHHHHHG----GGTEEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred cCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHH-HHHHHHHhh----cCCeEEEEEECCccCCCCCCCHHHHHHHHHH
Confidence 35677999999999999999999998 45577888 999999984 2369999999842 122444556677 4
Q ss_pred HhhcCCCeee-eecCCcccHHHHHHHHHh-hc-----cCCccEEEEeCCCCceech
Q 039432 303 LFSCSLPWYS-VRQPQLLNSAVVNLIKQE-WN-----FKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 303 ~~~~~MPWyA-Vp~~~~i~~~~~r~ike~-~~-----~~~iP~LVvL~pqGkv~~~ 351 (598)
.+.-..|.++ +........+..+++++. ++ ++.+|+.+++|++|+++..
T Consensus 93 ~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 148 (169)
T 2v1m_A 93 KYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKR 148 (169)
T ss_dssp HHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEE
T ss_pred hcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEE
Confidence 4444444332 111111112234555433 24 5567999999999999864
No 20
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.73 E-value=4.8e-08 Score=90.24 Aligned_cols=115 Identities=12% Similarity=0.083 Sum_probs=82.6
Q ss_pred ccCCceeecceecCcEEEEEEecCCCC--ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPELL--PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~~--~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
..+|..|++++++||.|+|+|-+.||+ |..+++. |.++|+++. +.+.+++||+|++|..+ +.+.-++|-+-+.
T Consensus 15 d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~-l~~~~~~~~--~~~~~~~vv~is~d~~d--~~~~~~~~~~~~~ 89 (170)
T 3me7_A 15 DSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKS-LLKVIPKLG--TPGKDFWVITFTFDPKD--TLEDIKRFQKEYG 89 (170)
T ss_dssp ETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHH-HHTTHHHHC--CBTTTBEEEEEECCTTC--CHHHHHHHHHHTT
T ss_pred cCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHH-HHHHHHHhh--hcCCceEEEEEECCCCC--CHHHHHHHHHHcC
Confidence 457789999999999999999999984 6678888 999999984 24578999999985311 2344556655443
Q ss_pred -CC-CeeeeecCCcccHHHHHHHHHhhc---------cCCccEEEEeCCCCceech
Q 039432 307 -SL-PWYSVRQPQLLNSAVVNLIKQEWN---------FKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 307 -~M-PWyAVp~~~~i~~~~~r~ike~~~---------~~~iP~LVvL~pqGkv~~~ 351 (598)
.. .|.-+--. +....+.+.+.|+ +...|.++++||+|+++..
T Consensus 90 ~~~~~w~~l~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~ 142 (170)
T 3me7_A 90 IDGKGWKVVKAK---TSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDY 142 (170)
T ss_dssp CCSSSEEEEEES---SHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEE
T ss_pred CCCCCeEEEeCC---CHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEE
Confidence 33 37443222 2355666667665 4567899999999999853
No 21
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.73 E-value=2.5e-08 Score=88.82 Aligned_cols=114 Identities=10% Similarity=0.127 Sum_probs=76.0
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhh-hhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCC--CCChHhHHHHHHhh
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEK-LFLLVHQTYDHPHNKNLEESYKIVWVPISSSE--TWTDVEERNFELFS 305 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~-~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~--~W~D~de~~Fe~~~ 305 (598)
++|..+.++.++||.|+|+|.+.|| +|..+ ++. |.++|++.. +.+++||.|++|... .=+.+.-++|-.-
T Consensus 16 ~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~-l~~l~~~~~----~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~- 89 (158)
T 3eyt_A 16 NSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPL-AQKVRAAFP----EDKVAVLGLHTVFEHHEAMTPISLKAFLHE- 89 (158)
T ss_dssp SCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHH-HHHHHHHSC----TTTEEEEEEECCCSCGGGSCHHHHHHHHHH-
T ss_pred cCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHH-HHHHHHHhC----cCCEEEEEEEecccccccCCHHHHHHHHHH-
Confidence 4678999999999999999999998 45565 788 999999973 346999999973110 0012223333321
Q ss_pred cCCCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 306 CSLPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 306 ~~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
..++|-.+--++ .......+.+.|++.++|+.+++|++|+++..
T Consensus 90 ~~~~~~~~~d~~--~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 133 (158)
T 3eyt_A 90 YRIKFPVGVDQP--GDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAH 133 (158)
T ss_dssp TTCCSCEEEECC--CSSSSCHHHHHTTCCSSSEEEEECTTSEEEEE
T ss_pred cCCCceEEEcCc--cchhhHHHHHHcCCCCCCEEEEECCCCCEEEE
Confidence 233433222222 10111246678899999999999999999864
No 22
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.72 E-value=1.4e-08 Score=86.48 Aligned_cols=111 Identities=14% Similarity=0.229 Sum_probs=78.0
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
..+|..+.++.++||.|+|+|.+.|| +|....+. |.+++++. +.++.+|.|..+... .+.+.+....+...
T Consensus 9 ~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~-l~~~~~~~-----~~~~~~v~i~~~~~~--~~~~~~~~~~~~~~ 80 (138)
T 4evm_A 9 GVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPD-TDEIAKEA-----GDDYVVLTVVSPGHK--GEQSEADFKNWYKG 80 (138)
T ss_dssp BTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHH-HHHHHHTC-----TTTEEEEEEECTTST--TCCCHHHHHHHHTT
T ss_pred CCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHH-HHHHHHHh-----CCCcEEEEEEcCCCC--chhhHHHHHHHHhh
Confidence 35677999999999999999999998 46667777 89999884 356888888542111 13345566666665
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
.++...|. ..+. ...+.+.|++.+.|+++++|++|+++..
T Consensus 81 ~~~~~~~~--~~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 120 (138)
T 4evm_A 81 LDYKNLPV--LVDP--SGKLLETYGVRSYPTQAFIDKEGKLVKT 120 (138)
T ss_dssp CCCTTCCE--EECT--TCHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred cCCCCeeE--EECc--chHHHHHcCcccCCeEEEECCCCcEEEe
Confidence 55422222 1111 1246678899999999999999999753
No 23
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.72 E-value=3.8e-08 Score=91.97 Aligned_cols=117 Identities=9% Similarity=0.137 Sum_probs=81.1
Q ss_pred cCCceeecceecCcEEEEEEecCCCCCh-hhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCC---CCCCChHhHHHHH--H
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPELLPL-EKLFLLVHQTYDHPHNKNLEESYKIVWVPISS---SETWTDVEERNFE--L 303 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~~~~-~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~---~~~W~D~de~~Fe--~ 303 (598)
.+|..+.+++++||.|+|+|.+.||++| .+++. |.++|+++. +.+++||.|++|. -+..+.++-++|- .
T Consensus 36 ~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~-l~~l~~~~~----~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~ 110 (190)
T 2vup_A 36 ADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYET-ATTLYNKYK----SQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTK 110 (190)
T ss_dssp TTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHH-HHHHHHHHG----GGTCEEEEEECCCSTTCCCSCHHHHHHHHHHH
T ss_pred CCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHH-HHHHHHHHh----cCCeEEEEEEcCccCCCCCCCHHHHHHHHHHh
Confidence 4677899999999999999999998544 77888 999999984 2359999999842 1223444555564 4
Q ss_pred hhcCCCeeee-ecCCcccHHHHHHHH-HhhccCCcc------EEEEeCCCCceech
Q 039432 304 FSCSLPWYSV-RQPQLLNSAVVNLIK-QEWNFKEEP------IMVVLDSQGMVTNS 351 (598)
Q Consensus 304 ~~~~MPWyAV-p~~~~i~~~~~r~ik-e~~~~~~iP------~LVvL~pqGkv~~~ 351 (598)
+.-..|+++- ........+..+++. +.+++.++| +.+++|++|+++..
T Consensus 111 ~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 166 (190)
T 2vup_A 111 FKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVER 166 (190)
T ss_dssp HCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEE
T ss_pred cCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEE
Confidence 4445555541 111111122444443 457888999 99999999999864
No 24
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.71 E-value=9.1e-09 Score=91.22 Aligned_cols=105 Identities=16% Similarity=0.224 Sum_probs=75.2
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCC
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSL 308 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~M 308 (598)
.+|..+.++.++||.|+|+|.+.|| +|..+.+. |.++++++. +.+++|+.|++|. +.+.-+.|-.-+ .+
T Consensus 14 ~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~-l~~~~~~~~----~~~v~vv~v~~d~----~~~~~~~~~~~~-~~ 83 (151)
T 2f9s_A 14 TNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPY-MANQYKHFK----SQGVEIVAVNVGE----SKIAVHNFMKSY-GV 83 (151)
T ss_dssp TTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHH-HHHHHHHHG----GGTEEEEEEEESC----CHHHHHHHHHHH-TC
T ss_pred CCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHH-HHHHHHHhc----cCCeEEEEEECCC----CHHHHHHHHHHc-CC
Confidence 4677899999999999999999998 45667777 899998873 2469999999832 122333343322 34
Q ss_pred CeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 309 PWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 309 PWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
+|..+.-++ ..+.+.|++.+.|+++++|++|+++..
T Consensus 84 ~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 119 (151)
T 2f9s_A 84 NFPVVLDTD-------RQVLDAYDVSPLPTTFLINPEGKVVKV 119 (151)
T ss_dssp CSCEEEETT-------SHHHHHTTCCSSCEEEEECTTSEEEEE
T ss_pred CceEEECCc-------hHHHHhcCCCCCCeEEEECCCCcEEEE
Confidence 443332221 245677899999999999999999863
No 25
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.71 E-value=2.2e-08 Score=89.53 Aligned_cols=109 Identities=17% Similarity=0.126 Sum_probs=80.1
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCC
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSL 308 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~M 308 (598)
.+|..+.++.++||.|+|+|.+.|| +|..+.+. |.++|+++. ..+++||.|++|.... +...+.+..+...+
T Consensus 26 ~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~-l~~l~~~~~----~~~~~vv~v~~~~~~~--~~~~~~~~~~~~~~ 98 (164)
T 2h30_A 26 ADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQ-AEKWAQDAK----FSSANLITVASPGFLH--EKKDGEFQKWYAGL 98 (164)
T ss_dssp TTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHH-HHHHHTCGG----GTTSEEEEEECTTSTT--CCCTTHHHHHHTTS
T ss_pred CCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHH-HHHHHHHcc----cCCcEEEEEEcCCCcc--ccCHHHHHHHHHhC
Confidence 4677899999999999999999998 56677777 999999974 2359999999832111 22345677666654
Q ss_pred Ce--eeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 309 PW--YSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 309 PW--yAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
.| +.+-... ...+.+.|++++.|+++++|++|+++..
T Consensus 99 ~~~~~~~~~d~------~~~~~~~~~v~~~P~~~lid~~G~i~~~ 137 (164)
T 2h30_A 99 NYPKLPVVTDN------GGTIAQNLNISVYPSWALIGKDGDVQRI 137 (164)
T ss_dssp CCTTSCEEECT------TCHHHHHTTCCSSSEEEEECTTSCEEEE
T ss_pred CCCcceEEEcC------chHHHHHcCCCccceEEEECCCCcEEEE
Confidence 44 3343322 2346677899999999999999998753
No 26
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.71 E-value=3.4e-08 Score=88.75 Aligned_cols=120 Identities=8% Similarity=0.098 Sum_probs=84.4
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
..+|..+.++.++||.|+|+|.+.|| +|..+++. |.++|+++. +.++++|.|+.|. +.++|-. ...
T Consensus 28 ~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~-l~~~~~~~~----~~~~~~v~v~~d~-------~~~~~~~-~~~ 94 (158)
T 3hdc_A 28 TLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPS-MDRLVKSFP----KGDLVVLAVNVEK-------RFPEKYR-RAP 94 (158)
T ss_dssp CTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHH-HHHHHHHSS----TTSEEEEEEECSS-------SCCGGGG-GCC
T ss_pred cCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHH-HHHHHHHcc----cCCeEEEEEeCCH-------HHHHHHH-HcC
Confidence 35677899999999999999999998 45677777 999999973 3568999988721 2222222 234
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceec-------hhHHHHHHHhCcCccCCC
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN-------SNALDMVLIWGARGYPFS 368 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~-------~nA~~mI~~wG~~AfPFT 368 (598)
++|..+.-++ ..+.+.|++.+.|+++++|++|+++. .+.-+++..+...-|||.
T Consensus 95 ~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~~~ 155 (158)
T 3hdc_A 95 VSFNFLSDAT-------GQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGHHH 155 (158)
T ss_dssp CSCEEEECTT-------SHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC----
T ss_pred CCceEEECch-------HHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccccc
Confidence 5654443221 34667889999999999999999874 455677777777777763
No 27
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.67 E-value=3.5e-08 Score=87.80 Aligned_cols=115 Identities=11% Similarity=0.105 Sum_probs=76.1
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhh-hhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCC--CCChHhHHHHHHhh
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEK-LFLLVHQTYDHPHNKNLEESYKIVWVPISSSE--TWTDVEERNFELFS 305 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~-~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~--~W~D~de~~Fe~~~ 305 (598)
.+|..+.+++++||.|+|+|.+.|| +|+.+ ++. |.++|++.. +.+++||.|++|.-. .=+.+.-++|-..
T Consensus 18 ~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~-l~~l~~~~~----~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~- 91 (160)
T 3lor_A 18 VNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQ-AQKIHRMID----ESQVQVIGLHSVFEHHDVMTPEALKVFIDE- 91 (160)
T ss_dssp SSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHH-HHHHHHHSC----TTTEEEEEEECCCSCGGGSCHHHHHHHHHH-
T ss_pred cCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHH-HHHHHHHhC----cCCcEEEEEeccccccccCCHHHHHHHHHH-
Confidence 3678899999999999999999998 45565 777 999999973 236999999973100 0012233333322
Q ss_pred cCCCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 306 CSLPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 306 ~~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
..++|-.+--+.. .....+.+.+.|++.++|+.+++|++|+++..
T Consensus 92 ~~~~~~~~~d~~~-~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 136 (160)
T 3lor_A 92 FGIKFPVAVDMPR-EGQRIPSTMKKYRLEGTPSIILADRKGRIRQV 136 (160)
T ss_dssp TTCCSCEEEECCC-TTCSSCHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred cCCCCcEEECCcc-ccchhhhHHHhcccCccceEEEECCCCcEEEE
Confidence 2333332222210 11112336678899999999999999999864
No 28
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.66 E-value=3.6e-08 Score=87.97 Aligned_cols=108 Identities=11% Similarity=0.093 Sum_probs=73.9
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCC
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSL 308 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~M 308 (598)
.+|..+.++.++||.|+|+|.+.|| +|..+.+. |.++|++.. +.++++|.|++|. +.+.-++|-.- ..+
T Consensus 22 ~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~-l~~l~~~~~----~~~v~~v~v~~d~----~~~~~~~~~~~-~~~ 91 (165)
T 3or5_A 22 VDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPD-MVQVQKTWA----SRGFTFVGIAVNE----QLPNVKNYMKT-QGI 91 (165)
T ss_dssp TTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHH-HHHHHHHHT----TTTEEEEEEECSC----CHHHHHHHHHH-HTC
T ss_pred CCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHH-HHHHHHHhc----cCCeEEEEEECCC----CHHHHHHHHHH-cCC
Confidence 5677899999999999999999998 56666777 999999873 3359999999831 12233344322 345
Q ss_pred CeeeeecCCcccHHHHHHHHHhh--ccCCccEEEEeCCCCceech
Q 039432 309 PWYSVRQPQLLNSAVVNLIKQEW--NFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 309 PWyAVp~~~~i~~~~~r~ike~~--~~~~iP~LVvL~pqGkv~~~ 351 (598)
+|-.+.-+ .+..+.+...+ ++.+.|+++++|++|+++..
T Consensus 92 ~~~~~~~~----~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 132 (165)
T 3or5_A 92 IYPVMMAT----PELIRAFNGYIDGGITGIPTSFVIDASGNVSGV 132 (165)
T ss_dssp CSCEEECC----HHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEE
T ss_pred CCceEecC----HHHHHHHhhhhccCCCCCCeEEEECCCCcEEEE
Confidence 55444331 23333322211 78999999999999999743
No 29
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.64 E-value=7.1e-08 Score=87.47 Aligned_cols=105 Identities=18% Similarity=0.277 Sum_probs=78.1
Q ss_pred ccCCceeecceecCcE-EEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhh
Q 039432 229 AMKSEQLGVSELKDKV-VILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFS 305 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~-VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~ 305 (598)
..+|..+.+++++||. |+|+|- +.|| +|..+++. |.++|+++. +.+++||.|+.|. .+.-++|-+-+
T Consensus 15 ~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~-l~~~~~~~~----~~~v~vv~vs~d~-----~~~~~~~~~~~ 84 (161)
T 3drn_A 15 ADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASA-FRDNWDLLK----DYDVVVIGVSSDD-----INSHKRFKEKY 84 (161)
T ss_dssp ETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHH-HHHTHHHHH----TTCEEEEEEESCC-----HHHHHHHHHHT
T ss_pred cCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHH-HHHHHHHHH----HcCCEEEEEeCCC-----HHHHHHHHHHh
Confidence 3567789999999998 999998 9998 56677888 999999984 2359999999831 34444554432
Q ss_pred cCCCeeeeecCCcccHHHHHHHHHhhccCC----ccEEEEeCCCCceech
Q 039432 306 CSLPWYSVRQPQLLNSAVVNLIKQEWNFKE----EPIMVVLDSQGMVTNS 351 (598)
Q Consensus 306 ~~MPWyAVp~~~~i~~~~~r~ike~~~~~~----iP~LVvL~pqGkv~~~ 351 (598)
.+||..+.-++ ..+.+.|++.+ +|..+++|++|+++..
T Consensus 85 -~~~~~~~~d~~-------~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~ 126 (161)
T 3drn_A 85 -KLPFILVSDPD-------KKIRELYGAKGFILPARITFVIDKKGIIRHI 126 (161)
T ss_dssp -TCCSEEEECTT-------SHHHHHTTCCCSSSCCCEEEEECTTSBEEEE
T ss_pred -CCCceEEECCc-------HHHHHHcCCCCcCcccceEEEECCCCEEEEE
Confidence 45554443322 34567789999 9999999999999743
No 30
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.64 E-value=9.6e-08 Score=82.76 Aligned_cols=104 Identities=20% Similarity=0.259 Sum_probs=73.5
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc--
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC-- 306 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~-- 306 (598)
.+|..+.++. +||.|+|+|.+.|| +|..+.+. |.++|++.. +.++++|.|++|..+. +.+....+..
T Consensus 23 ~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~-l~~~~~~~~----~~~~~~v~v~~d~~~~----~~~~~~~~~~~~ 92 (145)
T 3erw_A 23 IEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQ-FQSFYDAHP----SDSVKLVTVNLVNSEQ----NQQVVEDFIKAN 92 (145)
T ss_dssp TTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHH-HHHHHHHCC----CSSEEEEEEECGGGSS----CHHHHHHHHHHT
T ss_pred CCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHH-HHHHHHHcC----CCCEEEEEEEccCCcC----CHHHHHHHHHHc
Confidence 4677899999 99999999999998 46666777 999998873 3469999999832111 2333333332
Q ss_pred CCCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 307 SLPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 307 ~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+|..+.-++ ..+.+.|++.+.|+++++|++|+++.
T Consensus 93 ~~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~ 129 (145)
T 3erw_A 93 KLTFPIVLDSK-------GELMKEYHIITIPTSFLLNEKGEIEK 129 (145)
T ss_dssp TCCSCEEECSS-------SHHHHHTTCCEESEEEEECTTCCEEE
T ss_pred CCceeEEEcCc-------hhHHHhcCcCccCeEEEEcCCCcEEE
Confidence 33433322211 24667889999999999999999875
No 31
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.63 E-value=5.3e-08 Score=90.96 Aligned_cols=118 Identities=8% Similarity=0.116 Sum_probs=78.2
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc-
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC- 306 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~- 306 (598)
..+|..+.+++++||.|+|+|.+.|| +|..+++. |.++|++.. +.+++||.|++|....-...+.+...++..
T Consensus 33 d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~-l~~l~~~~~----~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~ 107 (187)
T 3dwv_A 33 DADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYET-ATTLYNKYK----SQGFTVLAFPSNQFGGQEPGNEEEIKEFVCT 107 (187)
T ss_dssp BTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHH-HHHHHHHHG----GGTCEEEEEEBCCCSSCSSSBTTHHHHSCCB
T ss_pred cCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHH-HHHHHHHhh----hCCeEEEEEECcccCCCCCCCHHHHHHHHHh
Confidence 35777999999999999999999998 67788888 999999984 236999999984210000112334444333
Q ss_pred --CCCeeeee--c-CCcccHHHHHHHHH----hhccCCcc---EEEEeCCCCceech
Q 039432 307 --SLPWYSVR--Q-PQLLNSAVVNLIKQ----EWNFKEEP---IMVVLDSQGMVTNS 351 (598)
Q Consensus 307 --~MPWyAVp--~-~~~i~~~~~r~ike----~~~~~~iP---~LVvL~pqGkv~~~ 351 (598)
.++|-.+. . ......+..+++++ .+++..+| +.+++|++|+++..
T Consensus 108 ~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~ 164 (187)
T 3dwv_A 108 KFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVER 164 (187)
T ss_dssp CCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEE
T ss_pred ccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEE
Confidence 44444332 1 11111234455553 34667788 99999999999865
No 32
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.63 E-value=2.6e-08 Score=85.62 Aligned_cols=102 Identities=14% Similarity=0.140 Sum_probs=74.3
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
..+|..+.++.++||.|+|+|.+.|| +|..+.+. |.+++++.. +++++.|+.|. +.++-++|-.- ..
T Consensus 11 ~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~-l~~~~~~~~------~~~~~~v~~~~----~~~~~~~~~~~-~~ 78 (136)
T 1lu4_A 11 TLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPS-LSQVAAANP------AVTFVGIATRA----DVGAMQSFVSK-YN 78 (136)
T ss_dssp BTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHH-HHHHHHHCT------TSEEEEEECSS----CHHHHHHHHHH-HT
T ss_pred cCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHH-HHHHHHHCC------CcEEEEEEcCC----CHHHHHHHHHH-cC
Confidence 35678999999999999999999998 45566777 899998862 68999999821 13333444332 23
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
++|..+.-++ ..+.+.|++.+.|+++++|++|+++
T Consensus 79 ~~~~~~~d~~-------~~~~~~~~i~~~P~~~lid~~G~i~ 113 (136)
T 1lu4_A 79 LNFTNLNDAD-------GVIWARYNVPWQPAFVFYRADGTST 113 (136)
T ss_dssp CCSEEEECTT-------SHHHHHTTCCSSSEEEEECTTSCEE
T ss_pred CCceEEECCc-------hhHHHhcCCCCCCEEEEECCCCcEE
Confidence 4554443221 2356678999999999999999997
No 33
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.62 E-value=2.9e-08 Score=89.45 Aligned_cols=107 Identities=14% Similarity=0.203 Sum_probs=74.5
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCC----------CCC-hH
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSE----------TWT-DV 296 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~----------~W~-D~ 296 (598)
..+|..+.++.++||.|+|+|.+.|| +|..+.+. |.++|++.. +++||.|++|..+ ... ..
T Consensus 24 ~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~-l~~l~~~~~------~v~vv~i~~d~~~~~~~~~~~~~~~~~~~ 96 (165)
T 3ha9_A 24 TIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADL-LDRLTEKYR------EISVIAIDFWTAEALKALGLNKPGYPPPD 96 (165)
T ss_dssp BTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHH-HHHHHHHCT------TEEEEEEECCSHHHHHHHTCCSTTSCCCC
T ss_pred cCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHH-HHHHHHHcC------CcEEEEEEecccccccccccccccCCCCC
Confidence 35778999999999999999999998 45566677 999999862 7999999983100 000 02
Q ss_pred hHHHHHHhhcC--C-CeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 297 EERNFELFSCS--L-PWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 297 de~~Fe~~~~~--M-PWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+.+....+... + +|-.+- | ...+.+.|++.+.|+++++|++|+++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~-----d---~~~~~~~~~v~~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 97 TPEMFRKFIANYGDPSWIMVM-----D---DGSLVEKFNVRSIDYIVIMDKSSNVLY 145 (165)
T ss_dssp CHHHHHHHHHHHSCTTSEEEE-----C---CSHHHHHTTCCSSSEEEEEETTCCEEE
T ss_pred CHHHHHHHHHHcCCCCeeEEe-----C---hHHHHHHhCCCCceEEEEEcCCCcEEE
Confidence 33333333332 2 333222 2 234667789999999999999999987
No 34
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.62 E-value=1.4e-07 Score=86.66 Aligned_cols=110 Identities=12% Similarity=0.134 Sum_probs=77.1
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc-
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC- 306 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~- 306 (598)
..+|..+.+++++||.|+|+|-+.|| +|..+++. |.++|+++. +.+++||.|++|. -+.+..+.|-.-+.
T Consensus 47 ~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~-l~~l~~~~~----~~~~~vv~v~~d~---~~~~~~~~~~~~~~~ 118 (186)
T 1jfu_A 47 DADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPA-LDELQGKLS----GPNFEVVAINIDT---RDPEKPKTFLKEANL 118 (186)
T ss_dssp CTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHH-HHHHHHHHC----BTTEEEEEEECCC---SCTTHHHHHHHHTTC
T ss_pred cCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHH-HHHHHHHhc----cCCcEEEEEECCC---CCHHHHHHHHHHcCC
Confidence 35677999999999999999999998 56677788 999999873 3579999999842 11123345544332
Q ss_pred -CCCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 307 -SLPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 307 -~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
..|++.-+ +....+.+.-..+..+.|+.+++|++|+++..
T Consensus 119 ~~~~~~~d~-----~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 159 (186)
T 1jfu_A 119 TRLGYFNDQ-----KAKVFQDLKAIGRALGMPTSVLVDPQGCEIAT 159 (186)
T ss_dssp CTTCCEECT-----TCHHHHHHHTTTCCSSSSEEEEECTTSBEEEE
T ss_pred CCCceEECC-----cchHHHHhccccccCCCCEEEEECCCCCEEEE
Confidence 35665422 22444444333333599999999999999854
No 35
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.61 E-value=5.4e-08 Score=86.06 Aligned_cols=106 Identities=15% Similarity=0.174 Sum_probs=76.3
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCC
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSL 308 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~M 308 (598)
.+|..+.++.++||.|+|+|.+.|| +|....+. |.+++++.. +.+++||.|++|. -+.+.-++|-..+ ..
T Consensus 16 ~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~-l~~~~~~~~----~~~~~~v~v~~d~---~~~~~~~~~~~~~-~~ 86 (154)
T 3kcm_A 16 LNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPS-MMRLNAAMA----GKPFRMLCVSIDE---GGKVAVEEFFRKT-GF 86 (154)
T ss_dssp TTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHH-HHHHHHHTT----TSSEEEEEEECCT---THHHHHHHHHHHH-CC
T ss_pred CCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHH-HHHHHHHhc----cCCeEEEEEEcCC---cchHHHHHHHHHc-CC
Confidence 5677899999999999999999998 45677777 899999873 3479999999832 1122333443332 34
Q ss_pred CeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 309 PWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 309 PWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
+|..+.-++ ..+.+.|++.+.|+.+++|++|+++..
T Consensus 87 ~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 122 (154)
T 3kcm_A 87 TLPVLLDAD-------KRVGKLYGTTGVPETFVIDRHGVILKK 122 (154)
T ss_dssp CCCEEECTT-------CHHHHHHTCCSBCEEEEECTTSBEEEE
T ss_pred CeeEEecCc-------hHHHHHhCCCCCCeEEEECCCCcEEEE
Confidence 544333221 245677899999999999999999753
No 36
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.60 E-value=4e-08 Score=88.05 Aligned_cols=106 Identities=8% Similarity=0.057 Sum_probs=75.4
Q ss_pred cCCceeecceecCc-EEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 230 MKSEQLGVSELKDK-VVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 230 ~~~~kV~Is~L~gK-~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
.+|..+.+++++|| .|+|+|- +.|| +|..+++. |.++|+++. +.+++||.|++|. .+..++|-.-+
T Consensus 23 ~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~-l~~~~~~~~----~~~~~vv~is~d~-----~~~~~~~~~~~- 91 (160)
T 1xvw_A 23 QNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQ-LRDHLPEFE----NDDSAALAISVGP-----PPTHKIWATQS- 91 (160)
T ss_dssp TTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHH-HHHTGGGTS----SSSEEEEEEESCC-----HHHHHHHHHHH-
T ss_pred CCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHH-HHHHHHHHH----HCCcEEEEEeCCC-----HHHHHHHHHhc-
Confidence 46779999999998 8999996 9998 45567777 999999984 2479999999831 33444554432
Q ss_pred CCCeeeeecCCcccHHHHHHHHHhhccC----Ccc--EEEEeCCCCceech
Q 039432 307 SLPWYSVRQPQLLNSAVVNLIKQEWNFK----EEP--IMVVLDSQGMVTNS 351 (598)
Q Consensus 307 ~MPWyAVp~~~~i~~~~~r~ike~~~~~----~iP--~LVvL~pqGkv~~~ 351 (598)
..+|..+.- ......+.+.|++. ++| +.+++|++|+++..
T Consensus 92 ~~~~~~~~d-----~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~ 137 (160)
T 1xvw_A 92 GFTFPLLSD-----FWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFA 137 (160)
T ss_dssp TCCSCEEEC-----TTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEE
T ss_pred CCCceEEec-----CCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEE
Confidence 234433222 10012356678988 999 99999999999864
No 37
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.60 E-value=5.8e-08 Score=93.88 Aligned_cols=104 Identities=7% Similarity=0.139 Sum_probs=79.1
Q ss_pred CCceeecceecCcEEEEEEec-CCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhh---
Q 039432 231 KSEQLGVSELKDKVVILLVSK-PEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFS--- 305 (598)
Q Consensus 231 ~~~kV~Is~L~gK~VlLyfSa-l~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~--- 305 (598)
+|..|.+++++||.|+|+|-+ .|| +|..+++. |.++|++++ +.+++||.|++|. .++.+.|.+..
T Consensus 58 ~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~-l~~l~~~~~----~~~v~vv~Is~D~-----~~~~~~~~~~~~~~ 127 (222)
T 3ztl_A 58 EFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIA-FSDQVEEFN----SRNCQVIACSTDS-----QYSHLAWDNLDRKS 127 (222)
T ss_dssp EEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHH-HHHTHHHHH----TTTEEEEEEESSC-----HHHHHHHHHSCGGG
T ss_pred CCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHH-HHHHHHHHH----HCCCEEEEEECCC-----HHHHHHHHHHhhhh
Confidence 346899999999999999996 997 56688888 999999984 3469999999842 44555666543
Q ss_pred ---cCCCeeeeecCCcccHHHHHHHHHhhccC------CccEEEEeCCCCceech
Q 039432 306 ---CSLPWYSVRQPQLLNSAVVNLIKQEWNFK------EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 306 ---~~MPWyAVp~~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 351 (598)
..++|..+.-++ ..+.+.|++. ..|..+++|++|+++..
T Consensus 128 ~~~~~~~~~~l~D~~-------~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~ 175 (222)
T 3ztl_A 128 GGLGHMKIPLLADRK-------QEISKAYGVFDEEDGNAFRGLFIIDPNGILRQI 175 (222)
T ss_dssp TSCCSCSSCEEECSS-------SHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEE
T ss_pred ccccccceeEEeCCc-------hHHHHHcCCeecCCCCccceEEEECCCCeEEEE
Confidence 156666554432 3455667887 89999999999999865
No 38
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.02 E-value=5.2e-09 Score=93.78 Aligned_cols=106 Identities=15% Similarity=0.148 Sum_probs=74.1
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHH-HhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQ-TYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~-iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
.+|..+.+++++||.|+|+|.+.|| +|..+.+. |.+ +|++.. .+.+++||.|++ |.+.+....+...
T Consensus 21 ~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~-l~~~l~~~~~---~~~~~~vv~v~~-------d~~~~~~~~~~~~ 89 (159)
T 2ls5_A 21 TDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPF-IEKDIWLKHK---DNADFALIGIDR-------DEPLEKVLAFAKS 89 (159)
Confidence 4667899999999999999999998 56677777 887 888762 246799999997 3333333333333
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhc--cCCccEEEEeCCCCceech
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWN--FKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~--~~~iP~LVvL~pqGkv~~~ 351 (598)
+.+ +|+-..|. ...+.+.|+ +.+.|+++++|++|+++..
T Consensus 90 ~~~---~~~~~~d~--~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 130 (159)
T 2ls5_A 90 TGV---TYPLGLDP--GADIFAKYALRDAGITRNVLIDREGKIVKL 130 (159)
Confidence 322 33322232 234667778 5679999999999998854
No 39
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.59 E-value=1.7e-07 Score=86.69 Aligned_cols=117 Identities=11% Similarity=0.059 Sum_probs=77.5
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCC---CCCCChHhHHHHHHh
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISS---SETWTDVEERNFELF 304 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~---~~~W~D~de~~Fe~~ 304 (598)
..+|..+.+++++||.|+|+|.+.|| +|..+++. |.++|+++. +.+++||.|++|. -+..+.++-++|-.-
T Consensus 34 ~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~-l~~l~~~~~----~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~ 108 (183)
T 2obi_A 34 DIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQ-LVDLHARYA----ECGLRILAFPCNQFGKQEPGSNEEIKEFAAG 108 (183)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHH-HHHHHHHHG----GGTEEEEEEECCCSTTCCCSCHHHHHHHHHT
T ss_pred cCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHH-HHHHHHHHh----cCCeEEEEEECCCCCCCCCCCHHHHHHHHHH
Confidence 35677999999999999999999998 45577787 999999984 2369999999842 112334445555432
Q ss_pred hcCCCeeeee---cCCcccHHHHHHHHHhh---c-----cCCccEEEEeCCCCceech
Q 039432 305 SCSLPWYSVR---QPQLLNSAVVNLIKQEW---N-----FKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 305 ~~~MPWyAVp---~~~~i~~~~~r~ike~~---~-----~~~iP~LVvL~pqGkv~~~ 351 (598)
+ ..+|..+. .......+..+++++.. + ++.+|+.+++|++|+++..
T Consensus 109 ~-~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 165 (183)
T 2obi_A 109 Y-NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 165 (183)
T ss_dssp T-TCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEE
T ss_pred c-CCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEE
Confidence 2 33443332 11111123455555443 2 4557999999999999864
No 40
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.59 E-value=6.1e-08 Score=89.52 Aligned_cols=108 Identities=6% Similarity=0.075 Sum_probs=74.6
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCC---ChHhHHHHHHhh
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETW---TDVEERNFELFS 305 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W---~D~de~~Fe~~~ 305 (598)
.+|..+.+++++||.|+|+|.+.|| +|..+++. |.++|++.. +. ++||.|++|..... +.+.-+.|-.-+
T Consensus 21 ~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~-l~~l~~~~~----~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~ 94 (188)
T 2cvb_A 21 PRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGE-LVALAERYR----GK-VAFVGINANDYEKYPEDAPEKMAAFAEEH 94 (188)
T ss_dssp TTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHH-HHHHHHHTT----TT-EEEEEEECCCTTTCGGGSHHHHHHHHHHH
T ss_pred CCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHH-HHHHHHHhh----cC-eEEEEEEcCccccccccCHHHHHHHHHHh
Confidence 4677999999999999999999998 46677777 999999873 23 99999998321111 112223333322
Q ss_pred cCCCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 306 CSLPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 306 ~~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
.++|-.+- |. -..+.+.|++.+.|+++++|++|+++..
T Consensus 95 -~~~~~~~~-----d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 95 -GIFFPYLL-----DE--TQEVAKAYRALRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp -TCCSCEEE-----CS--SSHHHHHTTCCEESEEEEECTTCBEEEE
T ss_pred -CCCceEEE-----CC--cchHHHHcCCCCCCeEEEECCCCcEEEE
Confidence 23332222 21 1235567899999999999999999866
No 41
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.58 E-value=2.5e-07 Score=83.07 Aligned_cols=118 Identities=16% Similarity=0.313 Sum_probs=78.5
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCC---CCCChHhHHHHHH-
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSS---ETWTDVEERNFEL- 303 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~---~~W~D~de~~Fe~- 303 (598)
..+|..+.+++++||.|+|+|.+.|| +|..+++. |.++|+++. +.+++||.|++|.. +.-+.+.-++|-.
T Consensus 19 ~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~-l~~l~~~~~----~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~ 93 (170)
T 2p5q_A 19 DAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAE-MNQLYEKYK----DQGLEILAFPCNQFGEEEPGTNDQITDFVCT 93 (170)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHH-HHHHHHHHG----GGTEEEEEEECCTTTTCCCSCHHHHHHHHHH
T ss_pred cCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHH-HHHHHHHhc----cCCEEEEEEECCCCCCCCCCCHHHHHHHHHH
Confidence 35677999999999999999999998 45577788 999999984 23699999998321 1122334445544
Q ss_pred -hhcCCCeee-eecCCcccHHHHHHHH-Hhhcc--CCcc---EEEEeCCCCceech
Q 039432 304 -FSCSLPWYS-VRQPQLLNSAVVNLIK-QEWNF--KEEP---IMVVLDSQGMVTNS 351 (598)
Q Consensus 304 -~~~~MPWyA-Vp~~~~i~~~~~r~ik-e~~~~--~~iP---~LVvL~pqGkv~~~ 351 (598)
+.-..|.+. +.-......+..++++ +.+++ .++| +.+++|++|+++..
T Consensus 94 ~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~ 149 (170)
T 2p5q_A 94 RFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDR 149 (170)
T ss_dssp HTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEE
T ss_pred hcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEe
Confidence 233445443 1111111123444444 34566 7889 99999999999875
No 42
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.58 E-value=1.2e-07 Score=88.12 Aligned_cols=101 Identities=14% Similarity=0.209 Sum_probs=77.3
Q ss_pred eeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc---CC
Q 039432 234 QLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC---SL 308 (598)
Q Consensus 234 kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~---~M 308 (598)
.+.+++++||.|+|+|- +.|| +|..+++. |.++|+++. +.+++||.|++|. .+..+.|-..+. .+
T Consensus 23 ~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~-l~~~~~~~~----~~~v~vv~vs~d~-----~~~~~~~~~~~~~~~~~ 92 (187)
T 1we0_A 23 EVTEADLKGKWSIVVFYPADFSFVCPTELED-VQKEYAELK----KLGVEVYSVSTDT-----HFVHKAWHENSPAVGSI 92 (187)
T ss_dssp EEETTTTSSSEEEEEECSCTTCSSCTHHHHH-HHHHHHHHH----HTTEEEEEEESSC-----HHHHHHHHHSCHHHHTC
T ss_pred EecHHHHCCCCEEEEEECCCCCcchHHHHHH-HHHHHHHHH----HcCCEEEEEECCC-----HHHHHHHHHHhccccCC
Confidence 89999999999999999 9997 57788888 999999984 2369999999842 334555655442 56
Q ss_pred CeeeeecCCcccHHHHHHHHHhhccC------CccEEEEeCCCCceech
Q 039432 309 PWYSVRQPQLLNSAVVNLIKQEWNFK------EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 309 PWyAVp~~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 351 (598)
+|..+.-++ ..+.+.|++. +.|+.+++|++|+++..
T Consensus 93 ~~~~~~d~~-------~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~ 134 (187)
T 1we0_A 93 EYIMIGDPS-------QTISRQFDVLNEETGLADRGTFIIDPDGVIQAI 134 (187)
T ss_dssp CSEEEECTT-------CHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CceEEECCc-------hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEE
Confidence 765554322 3445667888 89999999999999865
No 43
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.58 E-value=1.4e-07 Score=88.42 Aligned_cols=102 Identities=12% Similarity=0.120 Sum_probs=76.3
Q ss_pred ceeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhh---cC
Q 039432 233 EQLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFS---CS 307 (598)
Q Consensus 233 ~kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~---~~ 307 (598)
..|.+++++||.|+|+|- +.|| +|..+++. |.++|+++. +.+++||.|++|. .+..+.|-..+ ..
T Consensus 36 ~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~-l~~l~~~~~----~~~v~vv~Vs~d~-----~~~~~~~~~~~~~~~~ 105 (195)
T 2bmx_A 36 TTITSDEHPGKWRVVFFWPKDFTFVCPTEIAA-FSKLNDEFE----DRDAQILGVSIDS-----EFAHFQWRAQHNDLKT 105 (195)
T ss_dssp EEEETTSSTTCEEEEEECSCTTSCCCHHHHHH-HHHTHHHHH----TTTEEEEEEESSC-----HHHHHHHHHHCTTGGG
T ss_pred cEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHH-HHHHHHHHH----HCCCEEEEEECCC-----HHHHHHHHHHhccccC
Confidence 689999999999999999 9997 67778888 999999984 2379999999832 33445555443 13
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhccC-----CccEEEEeCCCCceech
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNFK-----EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~~-----~iP~LVvL~pqGkv~~~ 351 (598)
++|..+.-++ ..+.+.|++. ++|+++++|++|+++..
T Consensus 106 ~~~~~~~d~~-------~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~ 147 (195)
T 2bmx_A 106 LPFPMLSDIK-------RELSQAAGVLNADGVADRVTFIVDPNNEIQFV 147 (195)
T ss_dssp CCSCEEECTT-------SHHHHHHTCBCTTSSBCEEEEEECTTSBEEEE
T ss_pred CceeEEeCCc-------hHHHHHhCCcccCCCccceEEEEcCCCeEEEE
Confidence 4554333221 3455678998 99999999999999864
No 44
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.57 E-value=2.2e-07 Score=83.99 Aligned_cols=115 Identities=7% Similarity=0.052 Sum_probs=76.4
Q ss_pred ccCCceeecceecCcEEEEEEecCCC--CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL--LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~--~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
..+|..+.+++++||.|+|+|-+.|| +|..+++. |.++|+++.. .+.+++||.|++|.... +.+.-++|-.- .
T Consensus 20 ~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~-l~~l~~~~~~--~~~~~~vv~is~d~~~d-~~~~~~~~~~~-~ 94 (174)
T 1xzo_A 20 NQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAH-MTDLQKKLKA--ENIDVRIISFSVDPEND-KPKQLKKFAAN-Y 94 (174)
T ss_dssp CTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHH-HHHHHHHHHH--TTCCCEEEEEESCTTTC-CHHHHHHHHTT-S
T ss_pred cCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHH-HHHHHHHhhh--cCCcEEEEEEEeCCCCC-CHHHHHHHHHH-c
Confidence 35677999999999999999999998 46788888 8999998842 23479999999842100 11223344332 2
Q ss_pred CCCe---eeeecCCcccHHHHHHHH-Hh-----------hccCCccEEEEeCCCCceech
Q 039432 307 SLPW---YSVRQPQLLNSAVVNLIK-QE-----------WNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 307 ~MPW---yAVp~~~~i~~~~~r~ik-e~-----------~~~~~iP~LVvL~pqGkv~~~ 351 (598)
.+++ ..+.-+ +.+..+.+. .. +++...|+.+++|++|+++..
T Consensus 95 ~~~~~~~~~l~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~ 151 (174)
T 1xzo_A 95 PLSFDNWDFLTGY---SQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKD 151 (174)
T ss_dssp CCCGGGEEEEBCS---CHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEE
T ss_pred CCCCcceEEEeCC---CHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEE
Confidence 2343 333222 234444332 22 356789999999999999853
No 45
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.57 E-value=2e-07 Score=86.72 Aligned_cols=117 Identities=11% Similarity=0.048 Sum_probs=77.2
Q ss_pred ccCCceeecceecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCC---CCCCChHhHHHHHHh
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISS---SETWTDVEERNFELF 304 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~---~~~W~D~de~~Fe~~ 304 (598)
..+|..+.+++++||.|+|+|.+.||+ |..+++. |.++|+++. +.+++||.|++|. -+.++.++-++|-.-
T Consensus 36 ~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~-l~~l~~~~~----~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~ 110 (185)
T 2gs3_A 36 DIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQ-LVDLHARYA----ECGLRILAFPCNQFGKQEPGSNEEIKEFAAG 110 (185)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHH-HHHHHHHHG----GGTEEEEEEECCTTTTCCCSCHHHHHHHHHH
T ss_pred cCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHH-HHHHHHHhh----cCCeEEEEEECcccCCCCCCCHHHHHHHHHH
Confidence 356779999999999999999999984 5578888 999999984 2369999999842 122444444555422
Q ss_pred hcCCCeeeee---cCCcccHHHHHHHHHhh---c-----cCCccEEEEeCCCCceech
Q 039432 305 SCSLPWYSVR---QPQLLNSAVVNLIKQEW---N-----FKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 305 ~~~MPWyAVp---~~~~i~~~~~r~ike~~---~-----~~~iP~LVvL~pqGkv~~~ 351 (598)
...+|-.+. .......+..+++++.. + ++..|+.+++|++|+++..
T Consensus 111 -~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 167 (185)
T 2gs3_A 111 -YNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 167 (185)
T ss_dssp -TTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEE
T ss_pred -cCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEe
Confidence 233433321 11111123445555433 3 3346999999999999864
No 46
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.57 E-value=3.8e-08 Score=84.20 Aligned_cols=101 Identities=13% Similarity=0.094 Sum_probs=72.4
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCC
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSL 308 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~M 308 (598)
.+|..+.++.++||.|+|+|.+.|| +|..+.+. |.+++++.. +++++.|++|. +.+.-++|-.-+ .+
T Consensus 13 ~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~-l~~~~~~~~------~~~~~~v~~~~----~~~~~~~~~~~~-~~ 80 (136)
T 1zzo_A 13 LDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPV-VGQVAASHP------EVTFVGVAGLD----QVPAMQEFVNKY-PV 80 (136)
T ss_dssp TTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHH-HHHHHHHCT------TSEEEEEECSS----CHHHHHHHHHHT-TC
T ss_pred CCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHH-HHHHHHHcC------CeEEEEEeCCC----CHHHHHHHHHHc-CC
Confidence 4677899999999999999999998 45666777 899998862 69999999821 122233333222 23
Q ss_pred -CeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 309 -PWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 309 -PWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
+|-.+.-.+ ..+.+.|++.+.|+++++|++|+++
T Consensus 81 ~~~~~~~d~~-------~~~~~~~~i~~~P~~~~id~~g~i~ 115 (136)
T 1zzo_A 81 KTFTQLADTD-------GSVWANFGVTQQPAYAFVDPHGNVD 115 (136)
T ss_dssp TTSEEEECTT-------CHHHHHTTCCSSSEEEEECTTCCEE
T ss_pred CceEEEEcCC-------cHHHHHcCCCCCceEEEECCCCCEE
Confidence 444333221 2456678999999999999999996
No 47
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.56 E-value=1.5e-07 Score=85.97 Aligned_cols=118 Identities=16% Similarity=0.175 Sum_probs=73.3
Q ss_pred ccCCceeecceecCcEEEEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCC-CCCCh--HhHHHHH--H
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSS-ETWTD--VEERNFE--L 303 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~-~~W~D--~de~~Fe--~ 303 (598)
..+|..+++++++||.|+|+|.+.||++|.+++. |.++|+++. +.+++||.|++|.. ++..| +.-++|- .
T Consensus 19 d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~~~~~-l~~l~~~~~----~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~ 93 (171)
T 3cmi_A 19 DKKGQPFPFDQLKGKVVLIVNVASKCGFTPQYKE-LEALYKRYK----DEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLN 93 (171)
T ss_dssp BTTSCBCCGGGGTTCEEEEEEEESSSCCHHHHHH-HHHHHHHHG----GGTEEEEEEEECSCC-----------------
T ss_pred cCCCCEecHHHcCCCEEEEEEEecCCCcchhHHH-HHHHHHHhc----cCCeEEEEEECcccCCCCCCCHHHHHHHHHhc
Confidence 3577799999999999999999999855558887 999999984 23699999997311 01111 1223342 2
Q ss_pred hhcCCCeeeeecCC-cccHHHHHHHH-HhhccCCcc------EEEEeCCCCceech
Q 039432 304 FSCSLPWYSVRQPQ-LLNSAVVNLIK-QEWNFKEEP------IMVVLDSQGMVTNS 351 (598)
Q Consensus 304 ~~~~MPWyAVp~~~-~i~~~~~r~ik-e~~~~~~iP------~LVvL~pqGkv~~~ 351 (598)
+.-..|.++-+-+. ..-.+..+++. +.+++.+.| +.+++|++|+++..
T Consensus 94 ~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 149 (171)
T 3cmi_A 94 YGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYER 149 (171)
T ss_dssp -CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEE
T ss_pred cCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEE
Confidence 22233333211111 00112344443 468999999 99999999999864
No 48
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.54 E-value=6.2e-08 Score=93.12 Aligned_cols=109 Identities=6% Similarity=0.010 Sum_probs=76.1
Q ss_pred ccCCceeecceecCcE-EEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCC---CChHhHHHHHH
Q 039432 229 AMKSEQLGVSELKDKV-VILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSET---WTDVEERNFEL 303 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~-VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~---W~D~de~~Fe~ 303 (598)
..+|..|.+++++||. |+|+|.+.|| +|..+++. |.++|++.. +.+++||.|++|.... -+.+.-++|-.
T Consensus 45 ~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~-l~~l~~~~~----~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~ 119 (218)
T 3u5r_E 45 DAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREA-LAKFAGDYA----GQGLAVVAINSNDAQAFPEETLERVGAEVK 119 (218)
T ss_dssp CTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHH-HHHHHHHHT----TTTEEEEEEECSCTTTCGGGSHHHHHHHHH
T ss_pred CCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHH-HHHHHHHHH----hCCcEEEEEECCcccccccCCHHHHHHHHH
Confidence 3567789999999995 9999999998 56677777 999999983 2459999999832111 12333334433
Q ss_pred hhcCCCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 304 FSCSLPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 304 ~~~~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
-+ .++|..+. |. -..+.+.|++.++|+++++|++|+++.
T Consensus 120 ~~-~~~~~~l~-----D~--~~~~~~~~~v~~~P~~~liD~~G~i~~ 158 (218)
T 3u5r_E 120 AY-GYGFPYLK-----DA--SQSVAKAYGAACTPDFFLYDRERRLVY 158 (218)
T ss_dssp HH-TCCSCEEE-----CT--TCHHHHHHTCCEESEEEEECTTCBEEE
T ss_pred Hh-CCCccEEE-----CC--ccHHHHHcCCCCCCeEEEECCCCcEEE
Confidence 22 23433332 21 124567789999999999999999984
No 49
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.54 E-value=7.3e-08 Score=90.44 Aligned_cols=109 Identities=15% Similarity=0.136 Sum_probs=77.9
Q ss_pred CCc---eeeccee-cCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHh
Q 039432 231 KSE---QLGVSEL-KDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELF 304 (598)
Q Consensus 231 ~~~---kV~Is~L-~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~ 304 (598)
+|. .|+++++ +||.|+|+|. +.|| +|..+++. |.++|+++. +.+++||.|++|. .+..+.|-.-
T Consensus 18 ~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~-l~~l~~~~~----~~~v~vv~Is~d~-----~~~~~~~~~~ 87 (198)
T 1zof_A 18 NNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIA-FDKRVKDFH----EKGFNVIGVSIDS-----EQVHFAWKNT 87 (198)
T ss_dssp TSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHH-HHHTHHHHH----HTTEEEEEEESSC-----HHHHHHHHTS
T ss_pred CCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHH-HHHHHHHHH----HcCCEEEEEECCC-----HHHHHHHHHh
Confidence 566 8999999 9999999999 9997 67788888 999999983 2369999999832 2334444432
Q ss_pred -hcCCCeeeeecCCcccHHHHHHHHHhhccC-----CccEEEEeCCCCceech
Q 039432 305 -SCSLPWYSVRQPQLLNSAVVNLIKQEWNFK-----EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 305 -~~~MPWyAVp~~~~i~~~~~r~ike~~~~~-----~iP~LVvL~pqGkv~~~ 351 (598)
.....|+.++|+-..|. .+.+.+.|++. ++|+.+++|++|+++..
T Consensus 88 ~~~~~~~~~~~~~~~~d~--~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~ 138 (198)
T 1zof_A 88 PVEKGGIGQVSFPMVADI--TKSISRDYDVLFEEAIALRGAFLIDKNMKVRHA 138 (198)
T ss_dssp CGGGTCCCCCSSCEEECT--TSHHHHHTTCEETTTEECEEEEEEETTTEEEEE
T ss_pred hhhcccccCceeEEEECC--chHHHHHhCCcccCCcccceEEEECCCCEEEEE
Confidence 11223333444322222 23455678998 99999999999999864
No 50
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.54 E-value=1.7e-07 Score=88.75 Aligned_cols=115 Identities=8% Similarity=0.081 Sum_probs=78.5
Q ss_pred ccCCceeecceecCcEEEEEEecCCCC--ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPELL--PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~~--~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
..+|..|.+++++||.|+|+|.+.||+ |..+++. |.++|+++.. +.+.+++||+|++|.-.. +.+.-+.|-.-+
T Consensus 28 d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~-l~~l~~~~~~-~~~~~v~vv~Is~D~~~d-~~~~~~~~~~~~- 103 (200)
T 2b7k_A 28 DMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDK-LGLWLNTLSS-KYGITLQPLFITCDPARD-SPAVLKEYLSDF- 103 (200)
T ss_dssp ETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHH-HHHHHHHHHH-HHCCCCEEEEEESCTTTC-CHHHHHHHHTTS-
T ss_pred cCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHH-HHHHHHHHHH-hhCCceEEEEEECCCCCC-CHHHHHHHHHHc-
Confidence 357789999999999999999999985 5677888 9999999841 124589999999842000 112233443322
Q ss_pred CCCeeeeecCCcccHHHHHHHHHhhccC-Ccc---------------EEEEeCCCCceech
Q 039432 307 SLPWYSVRQPQLLNSAVVNLIKQEWNFK-EEP---------------IMVVLDSQGMVTNS 351 (598)
Q Consensus 307 ~MPWyAVp~~~~i~~~~~r~ike~~~~~-~iP---------------~LVvL~pqGkv~~~ 351 (598)
..+|..++-. ....+.+.+.|++. ++| +.+++|++|+++..
T Consensus 104 ~~~~~~l~~~----~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~ 160 (200)
T 2b7k_A 104 HPSILGLTGT----FDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDA 160 (200)
T ss_dssp CTTCEEEECC----HHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEE
T ss_pred CCCceEEeCC----HHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEE
Confidence 2568766642 34455666778886 454 78999999999853
No 51
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.52 E-value=3.2e-07 Score=82.53 Aligned_cols=114 Identities=13% Similarity=0.204 Sum_probs=79.1
Q ss_pred ccCCceeecceecCcEEEEEEecCCCC--ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPELL--PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~~--~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
..+| .+.+++++||.|+|+|.+.||+ |..+++. |.++|+++... ...+++||+|++|... =+.+.-+.|-.-+
T Consensus 23 ~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~-l~~~~~~~~~~-~~~~v~vv~is~d~~~-d~~~~~~~~~~~~- 97 (172)
T 2k6v_A 23 GPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLA-LKRAYEKLPPK-AQERVQVIFVSVDPER-DPPEVADRYAKAF- 97 (172)
T ss_dssp CSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHH-HHHHHTTSCHH-HHTTEEEEEEESCTTT-CCHHHHHHHHHHH-
T ss_pred cCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHH-HHHHHHHhhhh-ccCCEEEEEEEECCCC-CCHHHHHHHHHHh-
Confidence 3567 9999999999999999999985 5677787 99999998310 0147999999984210 0123344555443
Q ss_pred CCCeeeeecCCcccHHHHHHHHHhhc---------------cCCccEEEEeCCCCceechh
Q 039432 307 SLPWYSVRQPQLLNSAVVNLIKQEWN---------------FKEEPIMVVLDSQGMVTNSN 352 (598)
Q Consensus 307 ~MPWyAVp~~~~i~~~~~r~ike~~~---------------~~~iP~LVvL~pqGkv~~~n 352 (598)
..+|..+.-+ ...++.+.+.|+ +.+.|+++++| +|+++...
T Consensus 98 ~~~~~~l~d~----~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~ 153 (172)
T 2k6v_A 98 HPSFLGLSGS----PEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLY 153 (172)
T ss_dssp CTTEEEECCC----HHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEE
T ss_pred CCCcEEEeCC----HHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEE
Confidence 3677666543 234445555554 57899999999 99998643
No 52
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.49 E-value=2.4e-07 Score=86.52 Aligned_cols=104 Identities=13% Similarity=0.197 Sum_probs=77.5
Q ss_pred CC--ceeeccee-cCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhh
Q 039432 231 KS--EQLGVSEL-KDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFS 305 (598)
Q Consensus 231 ~~--~kV~Is~L-~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~ 305 (598)
+| ..+.++++ +||.|+|+|- +.|| +|..+++. |.++|++++ +.+++||.|++|. .+..+.|-..+
T Consensus 17 ~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~-l~~~~~~~~----~~~v~vv~Is~d~-----~~~~~~~~~~~ 86 (192)
T 2h01_A 17 DNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIA-LDKALDSFK----ERNVELLGCSVDS-----KFTHLAWKKTP 86 (192)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHH-HHHTHHHHH----HTTEEEEEEESSC-----HHHHHHHHTSC
T ss_pred CCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHH-HHHHHHHHH----HCCCEEEEEEeCC-----HHHHHHHHHhH
Confidence 56 78999999 9999999999 9997 67788888 999999983 2469999999831 33444554433
Q ss_pred c------CCCeeeeecCCcccHHHHHHHHHhhccC-----CccEEEEeCCCCceech
Q 039432 306 C------SLPWYSVRQPQLLNSAVVNLIKQEWNFK-----EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 306 ~------~MPWyAVp~~~~i~~~~~r~ike~~~~~-----~iP~LVvL~pqGkv~~~ 351 (598)
. .++|..+.-+ .+.+.+.|++. ..|+.+++|++|+++..
T Consensus 87 ~~~~~~~~~~~~~l~D~-------~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~ 136 (192)
T 2h01_A 87 LSQGGIGNIKHTLISDI-------SKSIARSYDVLFNESVALRAFVLIDKQGVVQHL 136 (192)
T ss_dssp GGGTCCCSCSSEEEECT-------TSHHHHHTTCEETTTEECCEEEEECTTSBEEEE
T ss_pred HhhCCccCCCcCeEECC-------cHHHHHHhCCcCcCCceeeEEEEEcCCCEEEEE
Confidence 2 4555443322 13456778998 89999999999999865
No 53
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.49 E-value=2.1e-07 Score=83.80 Aligned_cols=104 Identities=11% Similarity=0.062 Sum_probs=76.9
Q ss_pred ccCCceeecceecCcEEEEEEec-CCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 229 AMKSEQLGVSELKDKVVILLVSK-PEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSa-l~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
..+|..|.+++++||.|+|+|-+ .|| +|..+++. |.+.|++++ +.+++||.|+.| +.+..++|-.-+
T Consensus 22 ~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~-l~~~~~~~~----~~~~~vv~vs~d-----~~~~~~~~~~~~- 90 (163)
T 3gkn_A 22 LSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLD-FNALLPEFD----KAGAKILGVSRD-----SVKSHDNFCAKQ- 90 (163)
T ss_dssp CSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHH-HHHHHHHHH----HTTCEEEEEESS-----CHHHHHHHHHHH-
T ss_pred CCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHH-HHHHHHHHH----HCCCEEEEEeCC-----CHHHHHHHHHHh-
Confidence 35778999999999999998887 887 56778888 999999984 246999999983 244555665533
Q ss_pred CCCeeeeecCCcccHHHHHHHHHhhccCC------------ccEEEEeCCCCceec
Q 039432 307 SLPWYSVRQPQLLNSAVVNLIKQEWNFKE------------EPIMVVLDSQGMVTN 350 (598)
Q Consensus 307 ~MPWyAVp~~~~i~~~~~r~ike~~~~~~------------iP~LVvL~pqGkv~~ 350 (598)
.++|-.+.-++ . .+.+.|++.. .|..+++|++|+++.
T Consensus 91 ~~~~~~~~d~~---~----~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~ 139 (163)
T 3gkn_A 91 GFAFPLVSDGD---E----ALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQ 139 (163)
T ss_dssp CCSSCEEECTT---C----HHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEE
T ss_pred CCCceEEECCc---H----HHHHHhCCccccccccccccCcceEEEEECCCCeEEE
Confidence 45555443222 2 3455677766 899999999999985
No 54
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.47 E-value=7.6e-07 Score=82.29 Aligned_cols=116 Identities=13% Similarity=0.213 Sum_probs=78.6
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCC---CCCChHhHHHHHH-
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSS---ETWTDVEERNFEL- 303 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~---~~W~D~de~~Fe~- 303 (598)
-.+|..|.+++++||.|+|+|-+.|| +|..+++. |.++|++.. +.+++||-|++|.. +.=+.++-++|-.
T Consensus 25 d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~-l~~l~~~~~----~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~ 99 (180)
T 3kij_A 25 DAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLG-LKELHKEFG----PSHFSVLAFPCNQFGESEPRPSKEVESFARK 99 (180)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHH-HHHHHHHHT----TTSEEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred cCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHH-HHHHHHHhc----cCCeEEEEEECCccccCCCCCHHHHHHHHHH
Confidence 35677999999999999999999998 56677888 999999983 34699999997321 1113344455544
Q ss_pred -hhcCCCeeeeec-CCcccHHHHHHHHHhhccCCccE----EEEeCCCCceech
Q 039432 304 -FSCSLPWYSVRQ-PQLLNSAVVNLIKQEWNFKEEPI----MVVLDSQGMVTNS 351 (598)
Q Consensus 304 -~~~~MPWyAVp~-~~~i~~~~~r~ike~~~~~~iP~----LVvL~pqGkv~~~ 351 (598)
+.-..|.++-.. .........+++.... .+.|. .+++|++|+++..
T Consensus 100 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--~~~p~~~~~~~lid~~G~i~~~ 151 (180)
T 3kij_A 100 NYGVTFPIFHKIKILGSEGEPAFRFLVDSS--KKEPRWNFWKYLVNPEGQVVKF 151 (180)
T ss_dssp HHCCCSCBBCCCCCSSTTCCHHHHHHHHHH--TCCCSSTTCEEEECTTSCEEEE
T ss_pred hcCCCCceeeeeeccCccccHHHHHHHhcC--CCCccccceEEEECCCCCEEEE
Confidence 334455554111 1111224566666543 47898 9999999999854
No 55
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.47 E-value=1.3e-07 Score=86.97 Aligned_cols=112 Identities=13% Similarity=0.077 Sum_probs=75.4
Q ss_pred CCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCC--CCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 231 KSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNK--NLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 231 ~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~--~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
+|..+.++.++||.|+|+|-+.|| +|..+++. |.++|+++... +...+++||.|++|. -+.+.-++|-.. ..
T Consensus 48 ~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~-l~~l~~~~~~~~~~~~~~v~~v~v~~d~---~~~~~~~~~~~~-~~ 122 (183)
T 3lwa_A 48 EGTQINLSDFENQVVILNAWGQWCAPCRSESDD-LQIIHEELQAAGNGDTPGGTVLGINVRD---YSRDIAQDFVTD-NG 122 (183)
T ss_dssp TTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHH-HHHHHHHHHHCC---CCSEEEEEEECSC---CCHHHHHHHHHH-TT
T ss_pred CCcEecHHHhCCCEEEEEEECCcCHhHHHHHHH-HHHHHHHHHhcCCCccCCcEEEEEECCC---CCHHHHHHHHHH-cC
Confidence 778999999999999999999998 56667777 99999998421 123455999999821 012233344332 24
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
+||..+.-++ ....+.+. .|++.++|+.+++|++|+++..
T Consensus 123 ~~~~~~~d~~---~~~~~~~~-~~~v~~~P~~~lid~~G~i~~~ 162 (183)
T 3lwa_A 123 LDYPSIYDPP---FMTAASLG-GVPASVIPTTIVLDKQHRPAAV 162 (183)
T ss_dssp CCSCEEECTT---CGGGGGTT-TCCTTCCSEEEEECTTSCEEEE
T ss_pred CCccEEECCc---chHHHHhc-cCCCCCCCeEEEECCCCcEEEE
Confidence 5666554432 22222222 2568999999999999999753
No 56
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.47 E-value=1.1e-07 Score=88.02 Aligned_cols=99 Identities=11% Similarity=0.055 Sum_probs=69.9
Q ss_pred ceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCee
Q 039432 233 EQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWY 311 (598)
Q Consensus 233 ~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWy 311 (598)
..+.++.++||.|+|+|-+.|| +|..+++. |.++|++ +++||.|++|. +.+.-++|-+- ...||.
T Consensus 49 ~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~-l~~l~~~--------~v~vv~vs~~d----~~~~~~~~~~~-~~~~~~ 114 (176)
T 3kh7_A 49 RRLTEADLKGKPALVNVWGTWCPSCRVEHPE-LTRLAEQ--------GVVIYGINYKD----DNAAAIKWLNE-LHNPYL 114 (176)
T ss_dssp SEEEGGGGCSSCEEEEEECTTCHHHHHHHHH-HHHHHHT--------TCEEEEEEESC----CHHHHHHHHHH-TTCCCS
T ss_pred ceecHHHhCCCEEEEEEECCcCHHHHHHHHH-HHHHHHC--------CCEEEEEeCCC----CHHHHHHHHHH-cCCCCc
Confidence 6899999999999999999998 56677777 8998876 49999999721 12223333322 234444
Q ss_pred eeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 312 SVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 312 AVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
.+-... ...+.+.|++.+.|+.+++|++|+++..
T Consensus 115 ~~~~d~------~~~~~~~~~v~~~P~~~lid~~G~i~~~ 148 (176)
T 3kh7_A 115 LSISDA------DGTLGLDLGVYGAPETYLIDKQGIIRHK 148 (176)
T ss_dssp EEEEET------TCHHHHHHTCCSSCEEEEECTTCBEEEE
T ss_pred eEEECC------cchHHHHcCCCCCCeEEEECCCCeEEEE
Confidence 322211 1245677899999999999999999853
No 57
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.46 E-value=1e-07 Score=82.89 Aligned_cols=108 Identities=13% Similarity=0.091 Sum_probs=73.9
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCC-ChHhHHHHHHhhcC
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETW-TDVEERNFELFSCS 307 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W-~D~de~~Fe~~~~~ 307 (598)
.+|..+..+.++||.|+|+|.+.|| +|..+.+. |.++|++.. + +++++.|++|....- +.+.-+.|-.-. .
T Consensus 17 ~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~-l~~l~~~~~----~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~ 89 (148)
T 2b5x_A 17 LNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQ-VNEFRDKYQ----D-QLNVVAVHMPRSEDDLDPGKIKETAAEH-D 89 (148)
T ss_dssp ESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHH-HHHHHHHHT----T-TSEEEEEECCCSTTTSSHHHHHHHHHHT-T
T ss_pred ccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHH-HHHHHHHhc----C-CcEEEEEEcCCCccccCHHHHHHHHHHc-C
Confidence 3677899999999999999999998 45566777 899998873 1 299999997321111 122333333322 3
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
++|..+.-.+ ..+.+.|++++.|+++++|++|+++..
T Consensus 90 ~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 126 (148)
T 2b5x_A 90 ITQPIFVDSD-------HALTDAFENEYVPAYYVFDKTGQLRHF 126 (148)
T ss_dssp CCSCEEECSS-------CHHHHHTCCCCSSEEEEECTTCBEEEE
T ss_pred CCcceEECCc-------hhHHHHhCCCCCCEEEEECCCCcEEEE
Confidence 4444332211 235667899999999999999998863
No 58
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.46 E-value=2.1e-07 Score=82.42 Aligned_cols=106 Identities=10% Similarity=0.096 Sum_probs=77.8
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
..+|..+.+++++ |.|+|+|.+.|| +|..+.+. |.++|++. +++||.|++| .+.+.+....+...
T Consensus 18 ~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~-l~~l~~~~-------~v~~v~v~~d-----~~~~~~~~~~~~~~ 83 (154)
T 3ia1_A 18 DPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPG-LHRVAEET-------GVPFYVISRE-----PRDTREVVLEYMKT 83 (154)
T ss_dssp CTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHH-HHHHHHHH-------CCCEEEEECC-----TTCCHHHHHHHHTT
T ss_pred CCCCCEechHHcC-CeEEEEEEcccChhHHHHHHH-HHHHHHHc-------CCeEEEEeCC-----CcccHHHHHHHHHH
Confidence 3467799999999 999999999998 56677777 89999885 5889999973 13345555555555
Q ss_pred CCeeeeecCCccc-HHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 308 LPWYSVRQPQLLN-SAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 308 MPWyAVp~~~~i~-~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
..+ +|+-..+ ......+.+.|++.+.|+++++|++|+++..
T Consensus 84 ~~~---~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 125 (154)
T 3ia1_A 84 YPR---FIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVAL 125 (154)
T ss_dssp CTT---EEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEE
T ss_pred cCC---CcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEE
Confidence 543 2222112 1234567888999999999999999998854
No 59
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.45 E-value=7.8e-07 Score=78.46 Aligned_cols=105 Identities=12% Similarity=0.196 Sum_probs=75.2
Q ss_pred cCCceeecceecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCC
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSL 308 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~M 308 (598)
.+|..+.+++++||.|+|+|.+.||+ |....+. |.+++++.. +.++.||.|++|. -+.+.-++|-.- ..+
T Consensus 16 ~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~-l~~l~~~~~----~~~~~vv~v~~~~---~~~~~~~~~~~~-~~~ 86 (153)
T 2l5o_A 16 LHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPK-IIKTANDYK----NKNFQVLAVAQPI---DPIESVRQYVKD-YGL 86 (153)
T ss_dssp TTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHH-HHHHHHHGG----GTTEEEEEEECTT---SCHHHHHHHHHH-TTC
T ss_pred CCCCCccHHHhCCCEEEEEEECCCCccHHHHHHH-HHHHHHHhc----cCCeEEEEEecCC---CCHHHHHHHHHH-cCC
Confidence 46778999999999999999999984 5566666 899998873 2469999999721 123334444332 345
Q ss_pred CeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 309 PWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 309 PWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
||-.+.-++ ..+.+.|++++.|+++++|++|+++.
T Consensus 87 ~~~~~~d~~-------~~~~~~~~i~~~P~~~lid~~G~i~~ 121 (153)
T 2l5o_A 87 PFTVMYDAD-------KAVGQAFGTQVYPTSVLIGKKGEILK 121 (153)
T ss_dssp CSEEEECSS-------CHHHHHHTCCSSSEEEEECSSSCCCE
T ss_pred CceEEcCch-------HHHHHHcCCCccCeEEEECCCCcEEE
Confidence 654333221 23567789999999999999999864
No 60
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.45 E-value=6.9e-07 Score=82.89 Aligned_cols=115 Identities=11% Similarity=0.085 Sum_probs=80.6
Q ss_pred cccCCceeecceecCcEEEEEEecCCC--CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCCh--HhHHHHHH
Q 039432 228 IAMKSEQLGVSELKDKVVILLVSKPEL--LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTD--VEERNFEL 303 (598)
Q Consensus 228 ~~~~~~kV~Is~L~gK~VlLyfSal~~--~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D--~de~~Fe~ 303 (598)
+-.+|..|.+++|+||.|+|+|-..|| +|+.++.. |.++|+.+. +.+.++.+|+||+|+ ..| +.-++|-+
T Consensus 18 ~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~-l~~l~~~~~--~~~~~v~~v~isvDp---~~Dtp~~l~~y~~ 91 (170)
T 4hde_A 18 TNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTAN-MAKLQKMAK--EEKLDVQFVSFSVDP---DLDKPENLKAFIQ 91 (170)
T ss_dssp ECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHH-HHHHHHHHH--HTTCCCEEEEEESCT---TTCCHHHHHHHHT
T ss_pred ECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHH-HHHHHHhhh--cccccceeEeeecCc---ccccHHHHHHHHH
Confidence 346788999999999999999999997 36677777 899999884 246689999999843 222 23355655
Q ss_pred hhc--CCCeeeeecCCcccHHHHHHHHHhhcc----------CCccEEEEeCCCCceec
Q 039432 304 FSC--SLPWYSVRQPQLLNSAVVNLIKQEWNF----------KEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 304 ~~~--~MPWyAVp~~~~i~~~~~r~ike~~~~----------~~iP~LVvL~pqGkv~~ 350 (598)
.+. ...|..+--++ .....+..+..|.. ..-|.++++||+|+++.
T Consensus 92 ~~~~~~~~~~~ltg~~--~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~ 148 (170)
T 4hde_A 92 KFTEDTSNWNLLTGYS--LEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMK 148 (170)
T ss_dssp TTCSCCTTEEEEBCSC--HHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEE
T ss_pred HcCCCCCCceecCccc--HHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEE
Confidence 442 24687766543 23444555544433 33478999999999974
No 61
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.43 E-value=4.6e-07 Score=88.23 Aligned_cols=104 Identities=11% Similarity=0.133 Sum_probs=77.0
Q ss_pred CC--ceeeccee-cCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhh
Q 039432 231 KS--EQLGVSEL-KDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFS 305 (598)
Q Consensus 231 ~~--~kV~Is~L-~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~ 305 (598)
+| ..|.++++ +||.|+|+|- +.|| +|..+++. |.++|++++ +.+++||.|+.|. .+..+.|-+-+
T Consensus 42 ~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~-l~~l~~~~~----~~~v~vv~Is~D~-----~~~~~~~~~~~ 111 (221)
T 2c0d_A 42 NNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIE-FNKHIKDFE----NKNVELLGISVDS-----VYSHLAWKNMP 111 (221)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHH-HHHTHHHHH----HTTEEEEEEESSC-----HHHHHHHHHSC
T ss_pred CCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHH-HHHHHHHHH----HCCCEEEEEeCCC-----HHHHHHHHHHh
Confidence 56 78999999 9999999999 9997 67788888 999999984 2469999999832 33455565544
Q ss_pred c------CCCeeeeecCCcccHHHHHHHHHhhcc-----CCccEEEEeCCCCceech
Q 039432 306 C------SLPWYSVRQPQLLNSAVVNLIKQEWNF-----KEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 306 ~------~MPWyAVp~~~~i~~~~~r~ike~~~~-----~~iP~LVvL~pqGkv~~~ 351 (598)
. .++|-.+--+ ...+.+.|++ ...|..+++|++|+++..
T Consensus 112 ~~~~g~~~~~fp~l~D~-------~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~ 161 (221)
T 2c0d_A 112 IEKGGIGNVEFTLVSDI-------NKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQ 161 (221)
T ss_dssp GGGTCCCSCSSEEEECT-------TSHHHHHTTCEETTTEECEEEEEECTTSBEEEE
T ss_pred hhhcCccCCceEEEECC-------chHHHHHcCCcccCCCccceEEEECCCCeEEEE
Confidence 2 4455433222 1234566777 368999999999999865
No 62
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.42 E-value=4.5e-07 Score=84.37 Aligned_cols=104 Identities=9% Similarity=0.065 Sum_probs=74.3
Q ss_pred cCCceeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 230 MKSEQLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
.+|..|.+++++||.|+|+|- +.|| +|..+++. |.++|++++ +.+++||.|+.|. .++.++|-.-+ .
T Consensus 39 ~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~-l~~l~~~~~----~~~~~vv~Vs~D~-----~~~~~~~~~~~-~ 107 (179)
T 3ixr_A 39 SGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLE-FNLLLPQFE----QINATVLGVSRDS-----VKSHDSFCAKQ-G 107 (179)
T ss_dssp GGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHH-HHHHHHHHH----TTTEEEEEEESCC-----HHHHHHHHHHH-T
T ss_pred CCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHH-HHHHHHHHH----HCCCEEEEEcCCC-----HHHHHHHHHHc-C
Confidence 466789999999998888886 8997 57788888 999999984 3469999999842 44556665533 3
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhccCC------------ccEEEEeCCCCceech
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNFKE------------EPIMVVLDSQGMVTNS 351 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~~~------------iP~LVvL~pqGkv~~~ 351 (598)
++|-.+.-++ . .+.+.|++.. .|+.+++||+|+++..
T Consensus 108 ~~f~~l~D~~---~----~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~ 156 (179)
T 3ixr_A 108 FTFPLVSDSD---A----ILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEA 156 (179)
T ss_dssp CCSCEEECTT---C----HHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEE
T ss_pred CceEEEECCc---h----HHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEE
Confidence 4544333222 2 3445566643 6899999999999853
No 63
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.41 E-value=1.5e-06 Score=78.94 Aligned_cols=104 Identities=8% Similarity=0.085 Sum_probs=74.9
Q ss_pred ccCCceeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 229 AMKSEQLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
..+|..|++++++||.|+|+|= +.|| +|..+++. |.++|+++ .+++||.|+.|. .+..+.|-+-+
T Consensus 29 ~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~-l~~~~~~~------~~v~vv~is~d~-----~~~~~~~~~~~- 95 (163)
T 1psq_A 29 TTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRR-FNEELAGL------DNTVVLTVSMDL-----PFAQKRWCGAE- 95 (163)
T ss_dssp CTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHH-HHHHTTTC------TTEEEEEEESSC-----HHHHHHHHHHH-
T ss_pred cCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHH-HHHHHHHc------CCcEEEEEECCC-----HHHHHHHHHhc-
Confidence 3567799999999999999996 5887 57788888 99999986 469999999842 34455665543
Q ss_pred CC-Ceeeeec-CCcccHHHHHHHHHhhccC----Cc--cEEEEeCCCCceechh
Q 039432 307 SL-PWYSVRQ-PQLLNSAVVNLIKQEWNFK----EE--PIMVVLDSQGMVTNSN 352 (598)
Q Consensus 307 ~M-PWyAVp~-~~~i~~~~~r~ike~~~~~----~i--P~LVvL~pqGkv~~~n 352 (598)
.. +|..+.- ++ ..+.+.|++. +. |..+++|++|+++...
T Consensus 96 ~~~~~~~l~D~~~-------~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~ 142 (163)
T 1psq_A 96 GLDNAIMLSDYFD-------HSFGRDYALLINEWHLLARAVFVLDTDNTIRYVE 142 (163)
T ss_dssp TCTTSEEEECTTT-------CHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEE
T ss_pred CCCCcEEecCCch-------hHHHHHhCCccccCCceEEEEEEEcCCCeEEEEE
Confidence 34 5533322 11 2345566776 44 9999999999998653
No 64
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.40 E-value=2e-07 Score=87.50 Aligned_cols=104 Identities=10% Similarity=0.144 Sum_probs=76.2
Q ss_pred CC--ceeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 231 KS--EQLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 231 ~~--~kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
+| ..+.+++++||.|+|+|- +.|| +|..+++. |.++|++++ +.+++||.|++|. .++.+.|-.-+.
T Consensus 21 ~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~-l~~l~~~~~----~~~v~vv~Is~d~-----~~~~~~~~~~~~ 90 (197)
T 1qmv_A 21 DGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIA-FSNRAEDFR----KLGCEVLGVSVDS-----QFTHLAWINTPR 90 (197)
T ss_dssp TTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHH-HHHTHHHHH----TTTEEEEEEESSC-----HHHHHHHHTSCG
T ss_pred CCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHH-HHHHHHHHH----HCCCEEEEEECCC-----HHHHHHHHHHHH
Confidence 55 789999999999999999 9997 46677777 999999984 2469999999832 333444544331
Q ss_pred ------CCCeeeeecCCcccHHHHHHHHHhhccC------CccEEEEeCCCCceech
Q 039432 307 ------SLPWYSVRQPQLLNSAVVNLIKQEWNFK------EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 307 ------~MPWyAVp~~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 351 (598)
.++|..+.-+ .+.+.+.|++. ..|..+++|++|+++..
T Consensus 91 ~~~~~~~~~~p~l~D~-------~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~ 140 (197)
T 1qmv_A 91 KEGGLGPLNIPLLADV-------TRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQI 140 (197)
T ss_dssp GGTCCCSCSSCEEECT-------TCHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred hhCCCCCCceEEEECC-------cHHHHHHcCCccCCCCceeeEEEEECCCCcEEEE
Confidence 4555433322 12455678888 79999999999999864
No 65
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.39 E-value=5.6e-07 Score=86.97 Aligned_cols=104 Identities=10% Similarity=0.160 Sum_probs=76.9
Q ss_pred CCceeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhh-c-
Q 039432 231 KSEQLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFS-C- 306 (598)
Q Consensus 231 ~~~kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~-~- 306 (598)
+|..|.+++++||.|+|+|- +.|| +|..+++. |.++|++++ +.+++||.|++|. .++.+.|-+-+ .
T Consensus 45 ~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~-l~~l~~~~~----~~~v~vv~Is~D~-----~~~~~~~~~~~~~~ 114 (220)
T 1zye_A 45 EFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIA-FSDKASEFH----DVNCEVVAVSVDS-----HFSHLAWINTPRKN 114 (220)
T ss_dssp SEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHH-HHHHHHHHH----HTTEEEEEEESSC-----HHHHHHHHTSCGGG
T ss_pred CCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHH-HHHHHHHHH----HCCCEEEEEECCC-----HHHHHHHHHHHHHh
Confidence 45689999999999999999 9997 67788888 999999983 2469999999832 33344454322 1
Q ss_pred ----CCCeeeeecCCcccHHHHHHHHHhhccC------CccEEEEeCCCCceech
Q 039432 307 ----SLPWYSVRQPQLLNSAVVNLIKQEWNFK------EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 307 ----~MPWyAVp~~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 351 (598)
.++|..+.-+ .+.+.+.|++. .+|.++++|++|+++..
T Consensus 115 ~g~~~~~fp~l~D~-------~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~ 162 (220)
T 1zye_A 115 GGLGHMNIALLSDL-------TKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHL 162 (220)
T ss_dssp TCCCSCSSEEEECT-------TSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CCCcCCceEEEECC-------cHHHHHHhCCeecCCCcccceEEEECCCCEEEEE
Confidence 4455433322 23456778998 99999999999999864
No 66
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.39 E-value=5.1e-07 Score=85.29 Aligned_cols=104 Identities=6% Similarity=0.084 Sum_probs=76.5
Q ss_pred CC--ceeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 231 KS--EQLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 231 ~~--~kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
+| ..+.+++++||.|+|+|- +.|| +|..+++. |.++|++++ +.+++||.|++|. .+..++|-.-+.
T Consensus 23 ~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~-l~~l~~~~~----~~~v~vi~Is~D~-----~~~~~~~~~~~~ 92 (202)
T 1uul_A 23 NGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQ-FSDRVKEFS----DIGCEVLACSMDS-----EYSHLAWTSIER 92 (202)
T ss_dssp TSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHH-HHHTHHHHH----TTTEEEEEEESSC-----HHHHHHHHHSCG
T ss_pred CCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHH-HHHHHHHHH----HCCCEEEEEeCCC-----HHHHHHHHHHHH
Confidence 45 689999999999999999 9997 46677887 999999983 2469999999842 334445544331
Q ss_pred ------CCCeeeeecCCcccHHHHHHHHHhhccC------CccEEEEeCCCCceech
Q 039432 307 ------SLPWYSVRQPQLLNSAVVNLIKQEWNFK------EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 307 ------~MPWyAVp~~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 351 (598)
.++|..+.-+ .+.+.+.|++. .+|+.+++|++|+++..
T Consensus 93 ~~~~~~~~~~p~l~D~-------~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~ 142 (202)
T 1uul_A 93 KRGGLGQMNIPILADK-------TKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQI 142 (202)
T ss_dssp GGTCCCSCSSCEEECT-------TCHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred hhCCCCCCceeEEECC-------chHHHHHcCCccCCCCceeeEEEEECCCCEEEEE
Confidence 4555443322 13455667888 99999999999999865
No 67
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.39 E-value=5.8e-07 Score=79.36 Aligned_cols=99 Identities=16% Similarity=0.147 Sum_probs=71.2
Q ss_pred ceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCee
Q 039432 233 EQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWY 311 (598)
Q Consensus 233 ~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWy 311 (598)
..+.+++++||.++|+|.+.|| +|..+.+. |.++|++ +++++|.|++|. +.+.-++|-.-+ .++|.
T Consensus 33 ~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~-l~~l~~~-------~~v~~v~v~~~~----~~~~~~~~~~~~-~~~~~ 99 (156)
T 1kng_A 33 PGLDPAAFKGKVSLVNVWASWCVPCHDEAPL-LTELGKD-------KRFQLVGINYKD----AADNARRFLGRY-GNPFG 99 (156)
T ss_dssp CCBCGGGGTTSCEEEEEECTTCHHHHHHHHH-HHHHTTC-------TTSEEEEEEESC----CHHHHHHHHHHH-CCCCS
T ss_pred ceechHHhCCCEEEEEEEcccCHhHHHHHHH-HHHHHhc-------CCeEEEEEECCC----CHHHHHHHHHHc-CCCCc
Confidence 7899999999999999999998 45566666 8888765 469999999821 123334443322 35655
Q ss_pred eeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 312 SVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 312 AVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+-... ...+.+.|++.+.|+.+++|++|+++.
T Consensus 100 ~~~~d~------~~~~~~~~~v~~~P~~~~id~~G~i~~ 132 (156)
T 1kng_A 100 RVGVDA------NGRASIEWGVYGVPETFVVGREGTIVY 132 (156)
T ss_dssp EEEEET------TSHHHHHTTCCSSCEEEEECTTSBEEE
T ss_pred eeeeCc------hhHHHHhcCcCccCeEEEEcCCCCEEE
Confidence 333311 124567789999999999999999875
No 68
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.38 E-value=4e-07 Score=87.69 Aligned_cols=104 Identities=13% Similarity=0.209 Sum_probs=78.0
Q ss_pred CC--ceeeccee-cCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhh
Q 039432 231 KS--EQLGVSEL-KDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFS 305 (598)
Q Consensus 231 ~~--~kV~Is~L-~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~ 305 (598)
+| ..|.++++ +||.|+|+|- +.|| +|..+++. |.++|++++ +.+++||.|++|. .+..++|-.-+
T Consensus 38 ~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~-l~~l~~~~~----~~~v~vv~Is~D~-----~~~~~~~~~~~ 107 (213)
T 2i81_A 38 DNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIA-LDKALDAFH----ERNVELLGCSVDS-----KYTHLAWKKTP 107 (213)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHH-HHHTHHHHH----HTTEEEEEEESSC-----HHHHHHHHSSC
T ss_pred CCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHH-HHHHHHHHH----HCCCEEEEEeCCC-----HHHHHHHHHHH
Confidence 56 68999999 9999999999 9997 46677888 999999983 2469999999831 33445554433
Q ss_pred c------CCCeeeeecCCcccHHHHHHHHHhhccC-----CccEEEEeCCCCceech
Q 039432 306 C------SLPWYSVRQPQLLNSAVVNLIKQEWNFK-----EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 306 ~------~MPWyAVp~~~~i~~~~~r~ike~~~~~-----~iP~LVvL~pqGkv~~~ 351 (598)
. .++|..+--+ .+.+.+.|++. ..|..+++|++|+++..
T Consensus 108 ~~~~g~~~~~fp~l~D~-------~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~ 157 (213)
T 2i81_A 108 LAKGGIGNIKHTLLSDI-------TKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHL 157 (213)
T ss_dssp GGGTCCCSCSSEEEECT-------TSHHHHHTTCEETTTEECEEEEEECTTSBEEEE
T ss_pred HhhCCccCCCceEEECC-------chHHHHHhCCccccCCcccEEEEECCCCEEEEE
Confidence 2 5676544332 23456678888 89999999999999865
No 69
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.37 E-value=1.7e-07 Score=86.72 Aligned_cols=109 Identities=6% Similarity=0.053 Sum_probs=74.9
Q ss_pred cCCceeecceecCcE-EEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCC---CChHhHHHHHHh
Q 039432 230 MKSEQLGVSELKDKV-VILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSET---WTDVEERNFELF 304 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~-VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~---W~D~de~~Fe~~ 304 (598)
.+|..+.+++++||. |+|+|.+.|| +|..+++. |.++|++.. +.+++||.|++|.... -+.+.-+.|-.-
T Consensus 33 ~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~-l~~l~~~~~----~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~ 107 (196)
T 2ywi_A 33 IDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHE-LVRLANDYM----PKGVSFVAINSNDAEQYPEDSPENMKKVAEE 107 (196)
T ss_dssp TTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHH-HHHHHHHHG----GGTCEEEEEECSCTTTCGGGSHHHHHHHHHH
T ss_pred CCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHH-HHHHHHHHH----hCCcEEEEEECCccccccccCHHHHHHHHHH
Confidence 467799999999995 9999999998 56677777 999999873 2369999999832110 122333344332
Q ss_pred hcCCCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 305 SCSLPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 305 ~~~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
+ ..+|-.+.-+ +. .+.+.|++.+.|+++++|++|+++..
T Consensus 108 ~-~~~~~~~~d~---~~----~~~~~~~v~~~P~~~lid~~G~i~~~ 146 (196)
T 2ywi_A 108 L-GYPFPYLYDE---TQ----EVAKAYDAACTPDFYIFDRDLKCVYR 146 (196)
T ss_dssp H-TCCSCEEECS---SC----HHHHHHTCCEESEEEEEETTCBEEEE
T ss_pred c-CCCceEEECC---ch----HHHHHhCCCCCCeEEEEcCCCeEEEc
Confidence 2 2333322221 12 34567799999999999999999865
No 70
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.35 E-value=1.3e-06 Score=83.85 Aligned_cols=117 Identities=8% Similarity=0.038 Sum_probs=77.2
Q ss_pred cC-CceeecceecCcEEEEEEecCCCCCh-hhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCC---CCCChHhHHHHHHh
Q 039432 230 MK-SEQLGVSELKDKVVILLVSKPELLPL-EKLFLLVHQTYDHPHNKNLEESYKIVWVPISSS---ETWTDVEERNFELF 304 (598)
Q Consensus 230 ~~-~~kV~Is~L~gK~VlLyfSal~~~~~-~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~---~~W~D~de~~Fe~~ 304 (598)
.+ |..|.+++++||.|+|+|-+.||++| .+++. |.++|++.. +.+++||-||+|.. +.-+.+.-++|-.+
T Consensus 34 ~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~-l~~l~~~~~----~~g~~vv~v~~d~~~~~e~d~~~~i~~f~~~ 108 (208)
T 2f8a_A 34 LAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQ-MNELQRRLG----PRGLVVLGFPCNQFGHQENAKNEEILNSLKY 108 (208)
T ss_dssp TTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHH-HHHHHHHHG----GGTEEEEEEECCCSTTTTCSCHHHHHHHHHH
T ss_pred CCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHH-HHHHHHHcc----CCCeEEEEEECCcccccCCCCHHHHHHHHHh
Confidence 35 78999999999999999999998544 56888 999999973 23699999998411 11223445566542
Q ss_pred -----hcCCCeeeee--cC-CcccHHHHHHHHHhhc-------------------------cCCccEEEEeCCCCceech
Q 039432 305 -----SCSLPWYSVR--QP-QLLNSAVVNLIKQEWN-------------------------FKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 305 -----~~~MPWyAVp--~~-~~i~~~~~r~ike~~~-------------------------~~~iP~LVvL~pqGkv~~~ 351 (598)
....++-.+. -. .....+..+++++.+. ++..|+.+++|++|+++..
T Consensus 109 ~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~ 188 (208)
T 2f8a_A 109 VRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRR 188 (208)
T ss_dssp TSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred cccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEE
Confidence 2233322221 10 0001245667765542 4566999999999999864
No 71
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.33 E-value=2e-06 Score=78.46 Aligned_cols=103 Identities=9% Similarity=0.083 Sum_probs=74.7
Q ss_pred ccCCceeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 229 AMKSEQLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
..+|..+.+++++||.|+|+|= +.|| +|..+++. |.++|++ .+++||.||.|. .+..++|-.-+
T Consensus 33 ~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~-l~~~~~~-------~~~~vv~is~d~-----~~~~~~~~~~~- 98 (166)
T 3p7x_A 33 DNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRK-FNSDASK-------EEGIVLTISADL-----PFAQKRWCASA- 98 (166)
T ss_dssp CTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHH-HHHHSCT-------TTSEEEEEESSC-----HHHHHHHHHHH-
T ss_pred cCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHH-HHHHhhc-------CCCEEEEEECCC-----HHHHHHHHHHc-
Confidence 3567799999999998888886 7787 56788888 9999987 469999999742 45556676544
Q ss_pred CC-CeeeeecCCcccHHHHHHHHHhhccCC------ccEEEEeCCCCceech
Q 039432 307 SL-PWYSVRQPQLLNSAVVNLIKQEWNFKE------EPIMVVLDSQGMVTNS 351 (598)
Q Consensus 307 ~M-PWyAVp~~~~i~~~~~r~ike~~~~~~------iP~LVvL~pqGkv~~~ 351 (598)
.+ +|-.+--+. +. .+.+.|++.. .|..+++|++|+++..
T Consensus 99 ~~~~~~~l~D~~--~~----~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~ 144 (166)
T 3p7x_A 99 GLDNVITLSDHR--DL----SFGENYGVVMEELRLLARAVFVLDADNKVVYK 144 (166)
T ss_dssp TCSSCEEEECTT--TC----HHHHHHTCEETTTTEECCEEEEECTTCBEEEE
T ss_pred CCCceEEccCCc--hh----HHHHHhCCccccCCceeeEEEEECCCCeEEEE
Confidence 34 444433220 12 3455667765 8999999999999864
No 72
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.32 E-value=6.3e-07 Score=86.19 Aligned_cols=103 Identities=7% Similarity=0.119 Sum_probs=74.7
Q ss_pred CceeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc---
Q 039432 232 SEQLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC--- 306 (598)
Q Consensus 232 ~~kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~--- 306 (598)
|..|.+++++||.|+|+|- +.|| +|..+++. |.++|++++ +.+++||.|++|. .+..+.|-.-+.
T Consensus 38 g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~-l~~l~~~~~----~~~v~vv~Is~D~-----~~~~~~~~~~~~~~~ 107 (211)
T 2pn8_A 38 FKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIA-FGDRLEEFR----SINTEVVACSVDS-----QFTHLAWINTPRRQG 107 (211)
T ss_dssp EEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHH-HHHTHHHHH----TTTEEEEEEESSC-----HHHHHHHHTSCGGGT
T ss_pred CcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHH-HHHHHHHHH----HCCCEEEEEECCC-----HHHHHHHHHHhhhcc
Confidence 4689999999999999998 9997 46788888 999999984 2469999999832 333455554331
Q ss_pred ---CCCeeeeecCCcccHHHHHHHHHhhccC------CccEEEEeCCCCceech
Q 039432 307 ---SLPWYSVRQPQLLNSAVVNLIKQEWNFK------EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 307 ---~MPWyAVp~~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 351 (598)
.++|-.+- |. .+.+.+.|++. ..|..+++|++|+++..
T Consensus 108 g~~~~~fp~l~-----D~--~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~ 154 (211)
T 2pn8_A 108 GLGPIRIPLLS-----DL--THQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI 154 (211)
T ss_dssp CCCSCSSCEEE-----CT--TSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CccCCceEEEE-----CC--chHHHHHcCCcccCCCcccceEEEECCCCEEEEE
Confidence 34443332 21 13455667774 59999999999999864
No 73
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.32 E-value=2.5e-06 Score=78.01 Aligned_cols=101 Identities=10% Similarity=0.086 Sum_probs=72.3
Q ss_pred cCCceeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 230 MKSEQLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
.+|..+++++++||.|+|+|= +.|| +|..+++. |.++|+++ .+++||.|+.|. .+..++|-+-+ .
T Consensus 35 ~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~-l~~~~~~~------~~v~vv~Is~d~-----~~~~~~~~~~~-~ 101 (171)
T 2yzh_A 35 KDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKK-FNEIMAGM------EGVDVTVVSMDL-----PFAQKRFCESF-N 101 (171)
T ss_dssp TTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHH-HHHHTTTC------TTEEEEEEESSC-----HHHHHHHHHHT-T
T ss_pred CCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHH-HHHHHHHc------CCceEEEEeCCC-----HHHHHHHHHHc-C
Confidence 467799999999999999985 8897 56788888 99999986 469999999842 33445565433 2
Q ss_pred C-Ceeeeec-CCcccHHHHHHHHHhhccC-------C--ccEEEEeCCCCceech
Q 039432 308 L-PWYSVRQ-PQLLNSAVVNLIKQEWNFK-------E--EPIMVVLDSQGMVTNS 351 (598)
Q Consensus 308 M-PWyAVp~-~~~i~~~~~r~ike~~~~~-------~--iP~LVvL~pqGkv~~~ 351 (598)
. +|..+.- ++ +.+ +.|++. + .|..+++|++|+++..
T Consensus 102 ~~~~~~l~D~~~-------~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~ 148 (171)
T 2yzh_A 102 IQNVTVASDFRY-------RDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYV 148 (171)
T ss_dssp CCSSEEEECTTT-------CGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEE
T ss_pred CCCeEEeecCcc-------CcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEE
Confidence 3 4433322 11 224 666764 2 6999999999999754
No 74
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.31 E-value=2.2e-06 Score=83.53 Aligned_cols=117 Identities=8% Similarity=0.039 Sum_probs=78.0
Q ss_pred cC-CceeecceecCcEEEEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCC---CCCCChHhHHHHHHh-
Q 039432 230 MK-SEQLGVSELKDKVVILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISS---SETWTDVEERNFELF- 304 (598)
Q Consensus 230 ~~-~~kV~Is~L~gK~VlLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~---~~~W~D~de~~Fe~~- 304 (598)
.+ |..|.+++++||.|+|+|-|.||+||.+++. |+++|++.. +.+++||-||.|. .++-+.++-++|-.+
T Consensus 43 ~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~e~p~-L~~l~~~~~----~~g~~Vlgvs~d~f~~~e~~~~~~i~~f~~~~ 117 (215)
T 2i3y_A 43 LNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPE-LNALQEELK----PYGLVVLGFPCNQFGKQEPGDNKEILPGLKYV 117 (215)
T ss_dssp SSSSCEEEGGGGTTSEEEEEEECSSSGGGGGHHH-HHHHHHHHG----GGTEEEEEEECCCSTTCCCSCHHHHHHHHHHT
T ss_pred CCCCCEEcHHHhCCCEEEEEEeCCCCCChHhHHH-HHHHHHHhc----cCCeEEEEEEccccCcCCCCCHHHHHHHHHhc
Confidence 45 7899999999999999999999866668988 999999984 2369999999732 123334455667652
Q ss_pred ----hc--CCCeeeeecCC-cccHHHHHHHHHhhc---------------------cCCccEEEEeCCCCceech
Q 039432 305 ----SC--SLPWYSVRQPQ-LLNSAVVNLIKQEWN---------------------FKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 305 ----~~--~MPWyAVp~~~-~i~~~~~r~ike~~~---------------------~~~iP~LVvL~pqGkv~~~ 351 (598)
.. ..|.++-.-.. ....+..+++++... ++..|+-.++|++|+++..
T Consensus 118 ~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~ 192 (215)
T 2i3y_A 118 RPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMR 192 (215)
T ss_dssp SSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred cchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEE
Confidence 22 34444311100 001245667765421 1223799999999999865
No 75
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.31 E-value=5.2e-07 Score=83.34 Aligned_cols=102 Identities=9% Similarity=0.084 Sum_probs=71.1
Q ss_pred cCCceeecceecCcEEEEEEecCC-C-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPE-L-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~-~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
.+|..+.+++++||.|+|+|-+.| | +|..+++. |.++|++ .+++||.|++|. .+..++|-.-+ .
T Consensus 32 ~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~-l~~l~~~-------~~v~vv~Is~D~-----~~~~~~~~~~~-~ 97 (175)
T 1xvq_A 32 GDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRT-FDERAAA-------SGATVLCVSKDL-----PFAQKRFCGAE-G 97 (175)
T ss_dssp TTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHH-HHHHHHH-------TTCEEEEEESSC-----HHHHTTCC-----
T ss_pred CCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHH-HHHHHhh-------cCCEEEEEECCC-----HHHHHHHHHHc-C
Confidence 467799999999999999999998 7 57788888 9999987 359999999831 22222222211 2
Q ss_pred C-CeeeeecCCcccHHHHHHHHHhhccCCc---------cEEEEeCCCCceechh
Q 039432 308 L-PWYSVRQPQLLNSAVVNLIKQEWNFKEE---------PIMVVLDSQGMVTNSN 352 (598)
Q Consensus 308 M-PWyAVp~~~~i~~~~~r~ike~~~~~~i---------P~LVvL~pqGkv~~~n 352 (598)
+ +|..+.-+ . +.+.+.|++... |..+++|++|+++...
T Consensus 98 ~~~~~~l~D~-----~--~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~ 145 (175)
T 1xvq_A 98 TENVMPASAF-----R--DSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTE 145 (175)
T ss_dssp --CEEEEECT-----T--SSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEE
T ss_pred CCCceEeeCC-----H--HHHHHHhCCcccccccCCcccceEEEECCCCeEEEEE
Confidence 2 33322221 1 345667788777 9999999999998654
No 76
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.30 E-value=2.8e-06 Score=82.08 Aligned_cols=117 Identities=8% Similarity=0.023 Sum_probs=77.3
Q ss_pred cC-CceeecceecCcEEEEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCC---CCCCChHhHHHHHHh-
Q 039432 230 MK-SEQLGVSELKDKVVILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISS---SETWTDVEERNFELF- 304 (598)
Q Consensus 230 ~~-~~kV~Is~L~gK~VlLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~---~~~W~D~de~~Fe~~- 304 (598)
.+ |..|++++++||.|+|+|-+.||+||.+++. |.++|++.. +.+++||-||.|. .++-+.+.-+.|-.+
T Consensus 25 ~~~G~~v~Ls~~kGKvvll~F~At~C~~c~e~p~-L~~l~~~~~----~~g~~vlgvs~d~f~~~e~~~~~~i~~f~~~~ 99 (207)
T 2r37_A 25 IDGEEYIPFKQYAGKYVLFVNVASYGGLTGQYIE-LNALQEELA----PFGLVILGFPCNQFGKQEPGENSEILPTLKYV 99 (207)
T ss_dssp TTSSCEEEGGGGTTSEEEEEEECSSSTTTTHHHH-HHHHHHHHG----GGTEEEEEEECCCBTTCCCSCHHHHHHHHHHT
T ss_pred CCCCCEEcHHHhCCCEEEEEEeCCCCCChHHHHH-HHHHHHHhc----cCCEEEEEEECcccCcCCCCCHHHHHHHHHhc
Confidence 45 7799999999999999999999866688988 999999984 2359999999731 122333445566652
Q ss_pred ----hcC--CCeeeeecCC-cccHHHHHHHHHhhc---------------------cCCccEEEEeCCCCceech
Q 039432 305 ----SCS--LPWYSVRQPQ-LLNSAVVNLIKQEWN---------------------FKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 305 ----~~~--MPWyAVp~~~-~i~~~~~r~ike~~~---------------------~~~iP~LVvL~pqGkv~~~ 351 (598)
... .|.++-.-.. ....+..+++++... ++..|+-+++|++|+++..
T Consensus 100 ~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~ 174 (207)
T 2r37_A 100 RPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMR 174 (207)
T ss_dssp SSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred chhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEE
Confidence 223 3433211100 001235566765432 1223799999999999764
No 77
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.29 E-value=2e-06 Score=77.58 Aligned_cols=100 Identities=11% Similarity=0.074 Sum_probs=70.3
Q ss_pred CCceeeccee-cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCC
Q 039432 231 KSEQLGVSEL-KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSL 308 (598)
Q Consensus 231 ~~~kV~Is~L-~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~M 308 (598)
+|..+..+.+ +||.|+|+|.+.|| +|..+.+. |.+++++ +++|+.|++|. +.+...+|-.-+ ..
T Consensus 39 ~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~-l~~l~~~--------~v~vv~v~~~~----~~~~~~~~~~~~-~~ 104 (168)
T 2b1k_A 39 PGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQY-LNQLSAQ--------GIRVVGMNYKD----DRQKAISWLKEL-GN 104 (168)
T ss_dssp TTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHH-HHHHHHT--------TCCEEEEEESC----CHHHHHHHHHHH-CC
T ss_pred CCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHH-HHHHHHC--------CCEEEEEECCC----ChHHHHHHHHHc-CC
Confidence 5668888885 99999999999998 45566676 8888765 58999999821 123344444322 45
Q ss_pred CeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 309 PWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 309 PWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
||..+-. |. ...+.+.|++.+.|+.+++|++|+++.
T Consensus 105 ~~~~~~~----d~--~~~~~~~~~v~~~P~~~lid~~G~i~~ 140 (168)
T 2b1k_A 105 PYALSLF----DG--DGMLGLDLGVYGAPETFLIDGNGIIRY 140 (168)
T ss_dssp CCSEEEE----ET--TCHHHHHHTCCSSSEEEEECTTSBEEE
T ss_pred CCceeeE----Cc--chHHHHHcCccccCEEEEECCCCeEEE
Confidence 5543222 11 123567789999999999999999984
No 78
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.28 E-value=1e-06 Score=86.84 Aligned_cols=103 Identities=8% Similarity=0.130 Sum_probs=75.9
Q ss_pred CceeecceecCcEEEEEEec-CCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhh----
Q 039432 232 SEQLGVSELKDKVVILLVSK-PEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFS---- 305 (598)
Q Consensus 232 ~~kV~Is~L~gK~VlLyfSa-l~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~---- 305 (598)
|..|.+++++||.|+|+|-+ .|| +|..+++. |.++|++++ +.+++||.||.|. .+..+.|-...
T Consensus 67 G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~-l~~l~~~~~----~~gv~vv~Is~D~-----~~~~~~~~~~~~~~~ 136 (240)
T 3qpm_A 67 FKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIA-FSDRVHEFR----AINTEVVACSVDS-----QFTHLAWIITPRKQG 136 (240)
T ss_dssp EEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHH-HHHHHHHHH----TTTEEEEEEESSC-----HHHHHHHHHSCGGGT
T ss_pred CcEEEHHHhCCCEEEEEEECCCCCCchHHHHHH-HHHHHHHHH----HCCCEEEEEECCC-----HHHHHHHHHHHHhhc
Confidence 44899999999999999988 887 46688888 999999984 2469999999842 34445565432
Q ss_pred --cCCCeeeeecCCcccHHHHHHHHHhhccC------CccEEEEeCCCCceech
Q 039432 306 --CSLPWYSVRQPQLLNSAVVNLIKQEWNFK------EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 306 --~~MPWyAVp~~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 351 (598)
..+||..+.-++ +.+.+.|++. ..|..+++||+|+++..
T Consensus 137 ~~~~~~fp~l~D~~-------~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~ 183 (240)
T 3qpm_A 137 GLGPMKIPLLSDLT-------HQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQI 183 (240)
T ss_dssp CCCSCSSCEEECTT-------SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CCCCCceeEEeCch-------HHHHHHhCCccccCCCccceEEEEcCCCeEEEE
Confidence 145655443322 3456677876 57999999999999865
No 79
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.28 E-value=2.3e-07 Score=84.11 Aligned_cols=104 Identities=11% Similarity=0.062 Sum_probs=72.2
Q ss_pred ccCCceeecceecCcEEEEEEecCC-C-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPE-L-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~-~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
..+|..+.+++++||.|+|+|-+.| | +|..+++. |.++|+++ .+++||.|+.|. .+..++|-+-+
T Consensus 31 ~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~-l~~l~~~~------~~~~vv~is~d~-----~~~~~~~~~~~- 97 (167)
T 2jsy_A 31 TNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRR-FNEEAAKL------GDVNVYTISADL-----PFAQARWCGAN- 97 (167)
T ss_dssp BTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHH-HHHHHHHH------SSCEEEEEECSS-----GGGTSCCGGGS-
T ss_pred CCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHH-HHHHHHHc------CCCEEEEEECCC-----HHHHHHHHHhc-
Confidence 3567799999999999999999999 7 45677777 99999986 459999999831 12222333222
Q ss_pred CC-Ceeeeec-CCcccHHHHHHHHHhhccCC------ccEEEEeCCCCceechh
Q 039432 307 SL-PWYSVRQ-PQLLNSAVVNLIKQEWNFKE------EPIMVVLDSQGMVTNSN 352 (598)
Q Consensus 307 ~M-PWyAVp~-~~~i~~~~~r~ike~~~~~~------iP~LVvL~pqGkv~~~n 352 (598)
.+ +|..+.- + ...+.+.|++.. .|..+++|++|+++...
T Consensus 98 ~~~~~~~~~d~~-------~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~ 144 (167)
T 2jsy_A 98 GIDKVETLSDHR-------DMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAE 144 (167)
T ss_dssp SCTTEEEEEGGG-------TCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEE
T ss_pred CCCCceEeeCCc-------hhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEE
Confidence 22 4433322 1 123456678876 39999999999998653
No 80
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.28 E-value=1.5e-06 Score=80.48 Aligned_cols=113 Identities=11% Similarity=0.176 Sum_probs=71.8
Q ss_pred ccCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCC--CCC-ChHhHHHHHH-
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSS--ETW-TDVEERNFEL- 303 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~--~~W-~D~de~~Fe~- 303 (598)
..+|..+.+++++||.|+|+|.+.|| +|..+++. |.++|+++. +.+++||.|++|.. .+- +.+.-++|-.
T Consensus 36 ~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~-l~~l~~~~~----~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~ 110 (181)
T 2p31_A 36 NIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRA-LQQLQRDLG----PHHFNVLAFPCNQFGQQEPDSNKEIESFARR 110 (181)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHH-HHHHHHHHG----GGTEEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred cCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHH-HHHHHHHhh----cCCEEEEEEECcCCCCCCCCCHHHHHHHHHh
Confidence 35677999999999999999999998 45567888 999999984 23699999997321 000 2233344543
Q ss_pred -hhcCCCeee-eecCCcccHHHHHHHHHhhccCCcc-------EEEEeCCCCceech
Q 039432 304 -FSCSLPWYS-VRQPQLLNSAVVNLIKQEWNFKEEP-------IMVVLDSQGMVTNS 351 (598)
Q Consensus 304 -~~~~MPWyA-Vp~~~~i~~~~~r~ike~~~~~~iP-------~LVvL~pqGkv~~~ 351 (598)
+.-..|.++ +........+..++ .+++.| +.+++|++|+++..
T Consensus 111 ~~~~~~p~~~~~d~~g~~~~~~~~~-----~~~~~P~~~~~~~~~~lid~~G~i~~~ 162 (181)
T 2p31_A 111 TYSVSFPMFSKIAVTGTGAHPAFKY-----LAQTSGKEPTWNFWKYLVAPDGKVVGA 162 (181)
T ss_dssp HHCCCSCBBCCCCCSSTTSCHHHHH-----HHHHHSCCCCSTTCEEEECTTSCEEEE
T ss_pred hcCCCceeEeecccCCccchhhhhh-----hhhcCCCccccceeEEEEcCCCCEEEE
Confidence 333344332 11111001112222 244567 99999999999864
No 81
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.26 E-value=1.5e-06 Score=79.26 Aligned_cols=104 Identities=13% Similarity=0.226 Sum_probs=69.3
Q ss_pred ccCCceeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 229 AMKSEQLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
..+|..|++++++||.|+|+|= +.|| +|..+++. |.+.|++.+ +.++++|-|+.|. .+..++|-+- .
T Consensus 17 ~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~-l~~~~~~~~----~~~~~~v~vs~d~-----~~~~~~~~~~-~ 85 (157)
T 4g2e_A 17 DTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCT-FRDSMAKFN----QVNAVVLGISVDP-----PFSNKAFKEH-N 85 (157)
T ss_dssp BTTSCEEEGGGGTTSCEEEEECSCTTCCC------C-CSCGGGGGG----GCSSEEEEEESSC-----HHHHHHHHHH-T
T ss_pred CCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhh-ccccccccc----ccCceEeeecccc-----hhHHHHHHHH-c
Confidence 4567799999999999999986 8997 57788888 888888873 4568999999842 4455666543 3
Q ss_pred CCCeeeeecCCcccHHHHHHHHHhhccC-----------CccEEEEeCCCCceec
Q 039432 307 SLPWYSVRQPQLLNSAVVNLIKQEWNFK-----------EEPIMVVLDSQGMVTN 350 (598)
Q Consensus 307 ~MPWyAVp~~~~i~~~~~r~ike~~~~~-----------~iP~LVvL~pqGkv~~ 350 (598)
.+||-.+--++ .+ +.+.|++. ..|+..|+|++|++..
T Consensus 86 ~~~~p~l~D~~---~~----v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~ 133 (157)
T 4g2e_A 86 KLNFTILSDYN---RE----VVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRY 133 (157)
T ss_dssp TCCSEEEECTT---SH----HHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEE
T ss_pred CCcEEEEEcCC---cH----HHHHcCCccccccCCCcceeeeeEEEECCCCEEEE
Confidence 55665443222 23 34455552 3578899999999974
No 82
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.26 E-value=3.5e-06 Score=80.39 Aligned_cols=104 Identities=16% Similarity=0.108 Sum_probs=73.6
Q ss_pred ccCCceeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 229 AMKSEQLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
..+|..|.+++++||.|+|+|- +.|| +|..+++. |.++|+++ .+++||.||.|. .+..++|-+-+
T Consensus 65 d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~-l~~l~~~~------~~v~vv~Is~D~-----~~~~~~~~~~~- 131 (200)
T 3zrd_A 65 AKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRK-FNQLAGEL------ENTVVLCISSDL-----PFAQSRFCGAE- 131 (200)
T ss_dssp CTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHH-HHHHHHTS------TTEEEEEEESSC-----HHHHTTCTTTT-
T ss_pred CCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHH-HHHHHHHh------CCCEEEEEECCC-----HHHHHHHHHHc-
Confidence 3567799999999999999887 6787 67788888 99999987 359999999831 33334443332
Q ss_pred CC-CeeeeecCCcccHHHHHHHHHhhccC-------C--ccEEEEeCCCCceech
Q 039432 307 SL-PWYSVRQPQLLNSAVVNLIKQEWNFK-------E--EPIMVVLDSQGMVTNS 351 (598)
Q Consensus 307 ~M-PWyAVp~~~~i~~~~~r~ike~~~~~-------~--iP~LVvL~pqGkv~~~ 351 (598)
.+ +|-.+.-+. -..+.+.|++. + .|..+++|++|+++..
T Consensus 132 ~~~~f~~l~D~~------~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~ 180 (200)
T 3zrd_A 132 GLSNVITLSTLR------GADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYS 180 (200)
T ss_dssp TCTTEEEEETTS------CTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEE
T ss_pred CCCCceEEecCc------hHHHHHHhCceeecccCCCccccEEEEECCCCeEEEE
Confidence 34 555443321 12344556664 3 5999999999999854
No 83
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.24 E-value=1.4e-06 Score=81.58 Aligned_cols=104 Identities=10% Similarity=0.179 Sum_probs=75.0
Q ss_pred CC--ceeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 231 KS--EQLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 231 ~~--~kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
+| ..|.+++++||.|+|+|= +.|| +|..+++. |.++|++++ +.+++||.|+.|. .+..+.|-+-+.
T Consensus 17 ~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~-l~~~~~~~~----~~~v~vv~Is~d~-----~~~~~~~~~~~~ 86 (186)
T 1n8j_A 17 NGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGD-VADHYEELQ----KLGVDVYSVSTDT-----HFTHKAWHSSSE 86 (186)
T ss_dssp TTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHH-HHHHHHHHH----HTTEEEEEEESSC-----HHHHHHHHHHCT
T ss_pred CCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHH-HHHHHHHHH----HCCCEEEEEECCC-----HHHHHHHHHHcC
Confidence 46 689999999999999986 5897 46788888 999999984 2469999999842 334556665442
Q ss_pred ---CCCeeeeecCCcccHHHHHHHHHhhccC------CccEEEEeCCCCceech
Q 039432 307 ---SLPWYSVRQPQLLNSAVVNLIKQEWNFK------EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 307 ---~MPWyAVp~~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 351 (598)
.++|..+.-++ . .+.+.|++. ..|..+++|++|+++..
T Consensus 87 ~~~~~~fp~l~D~~---~----~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~ 133 (186)
T 1n8j_A 87 TIAKIKYAMIGDPT---G----ALTRNFDNMREDEGLADRATFVVDPQGIIQAI 133 (186)
T ss_dssp TGGGCCSEEEECTT---S----HHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred cccCCceeEEECCc---h----HHHHHhCCccCCCCceeeEEEEECCCCeEEEE
Confidence 45654443221 2 244567776 26999999999999864
No 84
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.23 E-value=3.3e-06 Score=77.04 Aligned_cols=104 Identities=12% Similarity=0.095 Sum_probs=71.8
Q ss_pred cCCceeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 230 MKSEQLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
.+|..|.+++++||.|+|+|= +.|| +|..+++. |.+.|+++ .+++||.|+.|. .+..++|-.- ..
T Consensus 31 ~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~-l~~~~~~~------~~v~vv~Is~d~-----~~~~~~~~~~-~~ 97 (165)
T 1q98_A 31 NDLADVALNDFASKRKVLNIFPSIDTGVCATSVRK-FNQQAAKL------SNTIVLCISADL-----PFAQARFCGA-EG 97 (165)
T ss_dssp TTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHH-HHHHHHHS------TTEEEEEEESSC-----HHHHTTCTTT-TT
T ss_pred CCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHH-HHHHHHHc------CCCEEEEEeCCC-----HHHHHHHHHH-cC
Confidence 467799999999999999986 8897 67788888 99999986 469999999831 2223334322 23
Q ss_pred C-CeeeeecCCcccHHHHHHHHHhhccCC---------ccEEEEeCCCCceechh
Q 039432 308 L-PWYSVRQPQLLNSAVVNLIKQEWNFKE---------EPIMVVLDSQGMVTNSN 352 (598)
Q Consensus 308 M-PWyAVp~~~~i~~~~~r~ike~~~~~~---------iP~LVvL~pqGkv~~~n 352 (598)
+ +|..+--+. + ..+.+.|++.. .|..+++|++|+++...
T Consensus 98 ~~~~~~l~D~~--~----~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~ 146 (165)
T 1q98_A 98 IENAKTVSTFR--N----HALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQ 146 (165)
T ss_dssp CTTEEEEECTT--C----THHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred CCceEEeeccc--c----chHHHHhCceecccccCCccceeEEEEcCCCEEEEEE
Confidence 4 454332210 1 23445566642 59999999999998653
No 85
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.19 E-value=7.5e-07 Score=93.25 Aligned_cols=109 Identities=10% Similarity=0.018 Sum_probs=74.7
Q ss_pred cCCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCC-CChHhHHHHHHhhcC
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSET-WTDVEERNFELFSCS 307 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~-W~D~de~~Fe~~~~~ 307 (598)
.+|..+.+++++||.|+|+|.+.|| +|..+++. |.++|++.. +.+++||.|++|.... =+.+.-++|-.- ..
T Consensus 70 ~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~-L~~l~~~~~----~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~-~~ 143 (352)
T 2hyx_A 70 PGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPH-VVGWYQAYK----DSGLAVIGVHTPEYAFEKVPGNVAKGAAN-LG 143 (352)
T ss_dssp GGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHH-HHHHHHHHG----GGTEEEEEEECCSSGGGGCHHHHHHHHHH-HT
T ss_pred CCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHH-HHHHHHHhh----cCCeEEEEEECCcccccCCHHHHHHHHHH-cC
Confidence 4667899999999999999999998 56677777 999999874 2369999998731100 011222333322 23
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
++|-.+- |. ...+.+.|++.++|+++++|++|+++..
T Consensus 144 l~fpv~~-----D~--~~~l~~~ygV~~~Pt~~lID~~G~Iv~~ 180 (352)
T 2hyx_A 144 ISYPIAL-----DN--NYATWTNYRNRYWPAEYLIDATGTVRHI 180 (352)
T ss_dssp CCSCEEE-----CT--TSHHHHHTTCCEESEEEEECTTSBEEEE
T ss_pred CCccEEe-----CC--cHHHHHHcCCCccCEEEEEeCCCeEEEE
Confidence 3443222 21 1335667899999999999999999864
No 86
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.11 E-value=2.3e-06 Score=85.47 Aligned_cols=104 Identities=7% Similarity=0.118 Sum_probs=75.3
Q ss_pred CCceeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhh---
Q 039432 231 KSEQLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFS--- 305 (598)
Q Consensus 231 ~~~kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~--- 305 (598)
+|..|.+++++||.|+|+|= +.|| +|..+++. |.++|++++ +.+++||.||.|. ..+...|-.-.
T Consensus 80 ~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~-l~~l~~~~~----~~gv~vv~IS~D~-----~~~~~~~~~~~~~~ 149 (254)
T 3tjj_A 80 EFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIA-FGDRLEEFR----SINTEVVACSVDS-----QFTHLAWINTPRRQ 149 (254)
T ss_dssp EEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHH-HHHTHHHHH----TTTEEEEEEESSC-----HHHHHHHHTSCGGG
T ss_pred CCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHH-HHHHHHHHH----HcCCEEEEEcCCC-----HHHHHHHHHHHHHh
Confidence 35589999999999999886 8887 57788888 999999984 2469999999842 34445664432
Q ss_pred ---cCCCeeeeecCCcccHHHHHHHHHhhccC------CccEEEEeCCCCceech
Q 039432 306 ---CSLPWYSVRQPQLLNSAVVNLIKQEWNFK------EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 306 ---~~MPWyAVp~~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 351 (598)
..++|-.+.-++ +.+.+.|++. ..|..+|+|++|+++..
T Consensus 150 ~g~~~~~fp~l~D~~-------~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~ 197 (254)
T 3tjj_A 150 GGLGPIRIPLLSDLT-------HQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI 197 (254)
T ss_dssp TSCCSCSSCEEECTT-------SHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred cCCcccccceeeCcH-------HHHHHHcCCccccCCCccceEEEECCCCeEEEE
Confidence 145554443322 3455566774 47999999999999865
No 87
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.09 E-value=5.6e-06 Score=74.60 Aligned_cols=102 Identities=11% Similarity=0.236 Sum_probs=72.9
Q ss_pred cCCceeecceecCc--EEEEEE-ecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhh
Q 039432 230 MKSEQLGVSELKDK--VVILLV-SKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFS 305 (598)
Q Consensus 230 ~~~~kV~Is~L~gK--~VlLyf-Sal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~ 305 (598)
.+|..|.+++++|| .|+|+| .+.|| +|..+++. |.++|+++.. .. +||.|+.| +.+..+.|-.-+
T Consensus 21 ~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~-l~~~~~~~~~----~~-~vv~is~d-----~~~~~~~~~~~~ 89 (159)
T 2a4v_A 21 EDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASG-FRDNYQELKE----YA-AVFGLSAD-----SVTSQKKFQSKQ 89 (159)
T ss_dssp TTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHH-HHHHHHHHTT----TC-EEEEEESC-----CHHHHHHHHHHH
T ss_pred CCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHH-HHHHHHHHHh----CC-cEEEEeCC-----CHHHHHHHHHHh
Confidence 46779999999998 788887 68997 56788888 9999999841 23 99999984 233445565533
Q ss_pred cCCCeeeeecCCcccHHHHHHHHHhhccCCcc------EEEEeCCCCceech
Q 039432 306 CSLPWYSVRQPQLLNSAVVNLIKQEWNFKEEP------IMVVLDSQGMVTNS 351 (598)
Q Consensus 306 ~~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP------~LVvL~pqGkv~~~ 351 (598)
.++|..+--++ ..+.+.|++...| ..+++ ++|+++..
T Consensus 90 -~~~~~~l~D~~-------~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~ 132 (159)
T 2a4v_A 90 -NLPYHLLSDPK-------REFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFK 132 (159)
T ss_dssp -TCSSEEEECTT-------CHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEE
T ss_pred -CCCceEEECCc-------cHHHHHhCCcccccCCccceEEEE-cCCEEEEE
Confidence 35654443221 2355678999988 77778 99999864
No 88
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.09 E-value=3.2e-06 Score=80.27 Aligned_cols=153 Identities=9% Similarity=0.082 Sum_probs=89.7
Q ss_pred ecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCc
Q 039432 240 LKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQL 318 (598)
Q Consensus 240 L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~ 318 (598)
.+||.|+++|.+.|| +|..+.+. |.++++++.. .+.++.++-|-. |++
T Consensus 30 ~~~~~v~v~F~a~wC~~C~~~~p~-~~~~~~~~~~--~~~~~~~~~vd~-------~~~--------------------- 78 (241)
T 3idv_A 30 ADKDTVLLEFYAPWCGHCKQFAPE-YEKIANILKD--KDPPIPVAKIDA-------TSA--------------------- 78 (241)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHH-HHHHHHHHHT--SSSCCCEEEEET-------TTC---------------------
T ss_pred hcCCeEEEEEECCCCHHHHHhhHH-HHHHHHHHhh--cCCceEEEEEec-------cCC---------------------
Confidence 368999999999998 55566677 8999988731 223344444443 211
Q ss_pred ccHHHHHHHHHhhccCCccEEEEeCCCCceechhHHHHHHHhCcCccCCCchhHHhhhccc---ccc--cccccccCCcc
Q 039432 319 LNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNSNALDMVLIWGARGYPFSVTREIELWQEE---DWT--LPLMIDEIHPL 393 (598)
Q Consensus 319 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AfPFT~~r~e~L~~~e---~w~--lelLvd~id~~ 393 (598)
+.+.+.|++++.|++++++ +|+.+... | +.+.+...+.-++. .|. .+.+..-.+..
T Consensus 79 ------~~l~~~~~v~~~Pt~~~~~-~g~~~~~~--------g----~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~ 139 (241)
T 3idv_A 79 ------SVLASRFDVSGYPTIKILK-KGQAVDYE--------G----SRTQEEIVAKVREVSQPDWTPPPEVTLVLTKEN 139 (241)
T ss_dssp ------HHHHHHTTCCSSSEEEEEE-TTEEEECC--------S----CSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTT
T ss_pred ------HHHHHhcCCCcCCEEEEEc-CCCccccc--------C----cccHHHHHHHHhhccCcccccccccceeccHHH
Confidence 1366788999999999996 57665322 1 11223222221111 111 01111101112
Q ss_pred cccccccCcEEEEEcCCCh-hHHHHHHHHHHHH-Hh---cCceeeEEEeccCCc
Q 039432 394 LNKWVQEGRNICLYGSENK-DWIIEFNAKMMEI-RR---LGLQVDMVFVGVKNP 442 (598)
Q Consensus 394 I~~~i~egK~I~LYgg~d~-~Wir~FT~~l~~i-~~---~~~~~E~v~Vgkd~~ 442 (598)
+...+..++.++++|.+.+ ..|+.+.+.+.++ +. .+-.+.++.|..+..
T Consensus 140 ~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~ 193 (241)
T 3idv_A 140 FDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAE 193 (241)
T ss_dssp HHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTC
T ss_pred HHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCC
Confidence 2233568899999999942 4459999998888 54 233477777766643
No 89
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.99 E-value=1.4e-05 Score=70.09 Aligned_cols=82 Identities=12% Similarity=0.014 Sum_probs=62.1
Q ss_pred ccCCceeecceecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
..+|.++.++.++||.|+|+|.+.||+ |..+.+. |.+++++.. +++.++-|.+ |++.
T Consensus 38 ~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~-~~~~~~~~~-----~~~~~~~v~~-------~~~~--------- 95 (141)
T 3hxs_A 38 DYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPI-LEELSKEYA-----GKIYIYKVNV-------DKEP--------- 95 (141)
T ss_dssp CCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHH-HHHHHHHTT-----TTCEEEEEET-------TTCH---------
T ss_pred ccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHH-HHHHHHHhc-----CceEEEEEEC-------CCCH---------
Confidence 345668889999999999999999985 4455566 888888763 3466666665 2211
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|++++++++|+++.
T Consensus 96 ------------------~~~~~~~v~~~Pt~~~~~~~g~~~~ 120 (141)
T 3hxs_A 96 ------------------ELARDFGIQSIPTIWFVPMKGEPQV 120 (141)
T ss_dssp ------------------HHHHHTTCCSSSEEEEECSSSCCEE
T ss_pred ------------------HHHHHcCCCCcCEEEEEeCCCCEEE
Confidence 2567789999999999999999763
No 90
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.99 E-value=4.8e-05 Score=73.64 Aligned_cols=171 Identities=13% Similarity=0.121 Sum_probs=106.3
Q ss_pred CCc--eeecce-ecCcEEEEEEe-cCCC-CCh-hhhhHHHHHHhcCcCCCCCCCCe-EEEEEEcCCCCCCChHhHHHHHH
Q 039432 231 KSE--QLGVSE-LKDKVVILLVS-KPEL-LPL-EKLFLLVHQTYDHPHNKNLEESY-KIVWVPISSSETWTDVEERNFEL 303 (598)
Q Consensus 231 ~~~--kV~Is~-L~gK~VlLyfS-al~~-~~~-~~~~~~L~~iY~~l~~~~~~~~f-EIVwIpid~~~~W~D~de~~Fe~ 303 (598)
+|. .|.+++ ++||.|+|+|= +.|| +|. .+++. |.+.|++++ +.++ +||-|+.|. ....+.|-+
T Consensus 19 ~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~-l~~~~~~~~----~~~~~~vv~is~d~-----~~~~~~~~~ 88 (241)
T 1nm3_A 19 GDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPR-YNELAPVFK----KYGVDDILVVSVND-----TFVMNAWKE 88 (241)
T ss_dssp TTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHH-HHHHHHHHH----HTTCCEEEEEESSC-----HHHHHHHHH
T ss_pred CCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHH-HHHHHHHHH----HCCCCEEEEEEcCC-----HHHHHHHHH
Confidence 455 899999 99999999986 9997 566 68999 999999983 2468 999999832 334556655
Q ss_pred hhcCCC-eeeeecCCcccHHHHHHHHHhhccC-----------CccEEEEeCCCCceechhHHHHHHHhCcCcc--CCCc
Q 039432 304 FSCSLP-WYSVRQPQLLNSAVVNLIKQEWNFK-----------EEPIMVVLDSQGMVTNSNALDMVLIWGARGY--PFSV 369 (598)
Q Consensus 304 ~~~~MP-WyAVp~~~~i~~~~~r~ike~~~~~-----------~iP~LVvL~pqGkv~~~nA~~mI~~wG~~Af--PFT~ 369 (598)
-.. .+ |-.+.-+ +.+ +.+.|++. ..|..+++ ++|++..... |.... |++.
T Consensus 89 ~~~-~~~~~~l~D~---~~~----~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~-------~~~~~~~~~~~ 152 (241)
T 1nm3_A 89 DEK-SENISFIPDG---NGE----FTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFI-------EPNEPGDPFKV 152 (241)
T ss_dssp HTT-CTTSEEEECT---TSH----HHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEE-------CCSCSSCCCSS
T ss_pred hcC-CCceEEEECC---CcH----HHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEE-------eccCCCcccee
Confidence 332 22 3222222 122 44555664 35899999 9999985431 32221 4433
Q ss_pred hhHHhhhcccccccccccccCCcccccccccCcEEEEEcCCChhHHHHHHHHHHHH-HhcCceeeEEEeccCCchhhH
Q 039432 370 TREIELWQEEDWTLPLMIDEIHPLLNKWVQEGRNICLYGSENKDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSEQV 446 (598)
Q Consensus 370 ~r~e~L~~~e~w~lelLvd~id~~I~~~i~egK~I~LYgg~d~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e~v 446 (598)
...+++-+. ++... + ....|-+|... || -|..+++++ ++.++++|.+-|..+..++.+
T Consensus 153 ~~~~~il~~-----------l~~~~---i-~~~~i~ly~~~---~C-p~C~~a~~~L~~~~i~~~~~~i~~~~~~~~l 211 (241)
T 1nm3_A 153 SDADTMLKY-----------LAPQH---Q-VQESISIFTKP---GC-PFCAKAKQLLHDKGLSFEEIILGHDATIVSV 211 (241)
T ss_dssp SSHHHHHHH-----------HCTTS---C-CCCCEEEEECS---SC-HHHHHHHHHHHHHTCCCEEEETTTTCCHHHH
T ss_pred cCHHHHHHH-----------hhhhc---c-ccceEEEEECC---CC-hHHHHHHHHHHHcCCceEEEECCCchHHHHH
Confidence 444433211 11111 1 23457888765 44 344567777 778999999999887443433
No 91
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.95 E-value=5.9e-06 Score=76.26 Aligned_cols=105 Identities=10% Similarity=0.137 Sum_probs=73.6
Q ss_pred ccCCceeeccee--cCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHh
Q 039432 229 AMKSEQLGVSEL--KDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELF 304 (598)
Q Consensus 229 ~~~~~kV~Is~L--~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~ 304 (598)
..+|..|+++++ +||.|.|+|= +.|| +|..+++. |.+.|++++ +.++++|-|+.|. .+..++|-+-
T Consensus 18 ~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~-l~~~~~~~~----~~~v~vv~is~d~-----~~~~~~~~~~ 87 (164)
T 4gqc_A 18 NQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCT-FRDKMAQLE----KANAEVLAISVDS-----PWCLKKFKDE 87 (164)
T ss_dssp BTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEE-SCCCGGGGG----GSSSEEEEEESSC-----HHHHHHHHHH
T ss_pred CCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhh-hhhhHHHhh----ccCceEEEecCCC-----HHHHHHHHHh
Confidence 356779999998 8998888886 8897 57788888 889999873 3468999999842 3445667553
Q ss_pred hcCCCeeeeecCCcccHHHHHHHHHhhccC----------CccEEEEeCCCCceech
Q 039432 305 SCSLPWYSVRQPQLLNSAVVNLIKQEWNFK----------EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 305 ~~~MPWyAVp~~~~i~~~~~r~ike~~~~~----------~iP~LVvL~pqGkv~~~ 351 (598)
..+|+-.+--++ . .+.+.|++. ..|+..|+|++|++...
T Consensus 88 -~~~~fp~l~D~~---~----~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~ 136 (164)
T 4gqc_A 88 -NRLAFNLLSDYN---R----EVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYK 136 (164)
T ss_dssp -TTCCSEEEECTT---S----HHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEE
T ss_pred -cCcccceeecCc---h----HHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEE
Confidence 345544333222 2 344556653 36889999999999753
No 92
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=97.88 E-value=1.2e-05 Score=75.50 Aligned_cols=78 Identities=9% Similarity=0.030 Sum_probs=56.7
Q ss_pred eecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeee
Q 039432 235 LGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSV 313 (598)
Q Consensus 235 V~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAV 313 (598)
..++.++||.|+|.|++.|| ||+.+.|. |.+++++. .+++++.|.+ |+.++..+.+..
T Consensus 47 ~~l~~~~~k~vvv~F~A~WC~pC~~~~P~-l~~l~~~~------~~v~~~~v~~-------d~~~~~~~~~~~------- 105 (167)
T 1z6n_A 47 ERLQRIERRYRLLVAGEMWCPDCQINLAA-LDFAQRLQ------PNIELAIISK-------GRAEDDLRQRLA------- 105 (167)
T ss_dssp HHHHTCCSCEEEEEECCTTCHHHHHHHHH-HHHHHHHC------TTEEEEEECH-------HHHHHHTTTTTT-------
T ss_pred HHHHHhCCCEEEEEEECCCChhHHHHHHH-HHHHHHHC------CCcEEEEEEC-------CCCHHHHHHHHH-------
Confidence 34567899999999999998 56677777 99998763 2588888876 544332222111
Q ss_pred ecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 314 RQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 314 p~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
-+++++|++++++++|+++.
T Consensus 106 -----------------~~v~~iPt~i~~~~~G~~~~ 125 (167)
T 1z6n_A 106 -----------------LERIAIPLVLVLDEEFNLLG 125 (167)
T ss_dssp -----------------CSSCCSSEEEEECTTCCEEE
T ss_pred -----------------cCCCCcCeEEEECCCCCEEE
Confidence 14789999999999999864
No 93
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.84 E-value=1.7e-05 Score=77.13 Aligned_cols=103 Identities=4% Similarity=0.018 Sum_probs=70.6
Q ss_pred CCceeecceecCc--EEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHH----
Q 039432 231 KSEQLGVSELKDK--VVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFEL---- 303 (598)
Q Consensus 231 ~~~kV~Is~L~gK--~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~---- 303 (598)
+| ++++++++|| .|+++|-+.|| +|..+++. |.+.|++++ +.+++||.||+|. ....+.|-+
T Consensus 20 ~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~-l~~l~~~f~----~~~v~vi~vS~D~-----~~~~~~~~~~i~~ 88 (220)
T 1xcc_A 20 DG-DFELYKYIENSWAILFSHPNDFTPVCTTELAE-LGKMHEDFL----KLNCKLIGFSCNS-----KESHDKWIEDIKY 88 (220)
T ss_dssp SS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHH-HHHTHHHHH----TTTEEEEEEESSC-----HHHHHHHHHHHHH
T ss_pred CC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHH-HHHHHHHHH----HcCCEEEEEeCCC-----HHHHHHHHHHHHH
Confidence 45 8999999998 44444578887 57788888 999999984 2469999999842 333444543
Q ss_pred h--hcCCCeeeeecCCcccHHHHHHHHHhhccC------------CccEEEEeCCCCceech
Q 039432 304 F--SCSLPWYSVRQPQLLNSAVVNLIKQEWNFK------------EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 304 ~--~~~MPWyAVp~~~~i~~~~~r~ike~~~~~------------~iP~LVvL~pqGkv~~~ 351 (598)
+ ...++|..+--++ +.+.+.|++. ..|..+|+||+|++...
T Consensus 89 ~~~~~~~~fpil~D~~-------~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~ 143 (220)
T 1xcc_A 89 YGKLNKWEIPIVCDES-------RELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKAT 143 (220)
T ss_dssp HHTCSCCCCCEEECTT-------SHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEE
T ss_pred HhcCCCCcceeEECch-------hHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEE
Confidence 1 2455554333221 2344556762 37999999999998754
No 94
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.83 E-value=2.3e-05 Score=71.50 Aligned_cols=103 Identities=8% Similarity=0.044 Sum_probs=72.3
Q ss_pred cCC--ceeecce-ecCcEEEEEEe-cCCC-CCh-hhhhHHHHHHhcCcCCCCCCCCeE-EEEEEcCCCCCCChHhHHHHH
Q 039432 230 MKS--EQLGVSE-LKDKVVILLVS-KPEL-LPL-EKLFLLVHQTYDHPHNKNLEESYK-IVWVPISSSETWTDVEERNFE 302 (598)
Q Consensus 230 ~~~--~kV~Is~-L~gK~VlLyfS-al~~-~~~-~~~~~~L~~iY~~l~~~~~~~~fE-IVwIpid~~~~W~D~de~~Fe 302 (598)
.+| ..+++++ ++||.|+|+|= +.|| +|. .+++. |.+.|++++ +.+++ ||-|+.|. .+..+.|-
T Consensus 20 ~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~-l~~~~~~~~----~~~v~~vv~Is~d~-----~~~~~~~~ 89 (162)
T 1tp9_A 20 EQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPG-FIEKAGELK----SKGVTEILCISVND-----PFVMKAWA 89 (162)
T ss_dssp TTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHH-HHHHHHHHH----HTTCCCEEEEESSC-----HHHHHHHH
T ss_pred CCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHH-HHHHHHHHH----HCCCCEEEEEECCC-----HHHHHHHH
Confidence 466 7899999 99999999998 8897 566 68888 999999984 24688 99999831 33445555
Q ss_pred HhhcCC--CeeeeecCCcccHHHHHHHHHhhccC------C-----ccEEEEeCCCCceech
Q 039432 303 LFSCSL--PWYSVRQPQLLNSAVVNLIKQEWNFK------E-----EPIMVVLDSQGMVTNS 351 (598)
Q Consensus 303 ~~~~~M--PWyAVp~~~~i~~~~~r~ike~~~~~------~-----iP~LVvL~pqGkv~~~ 351 (598)
+-+ .. ||-.+- |.. +.+.+.|++. | .|...|+| +|++...
T Consensus 90 ~~~-~~~~~~~~l~-----D~~--~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~ 142 (162)
T 1tp9_A 90 KSY-PENKHVKFLA-----DGS--ATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAA 142 (162)
T ss_dssp HTC-TTCSSEEEEE-----CTT--SHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEE
T ss_pred Hhc-CCCCCeEEEE-----CCC--chHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEE
Confidence 432 23 443322 211 3345556765 3 89999999 9999865
No 95
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.83 E-value=3.4e-05 Score=75.19 Aligned_cols=103 Identities=8% Similarity=0.048 Sum_probs=70.9
Q ss_pred CCceeecceecCc--EEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHh---
Q 039432 231 KSEQLGVSELKDK--VVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELF--- 304 (598)
Q Consensus 231 ~~~kV~Is~L~gK--~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~--- 304 (598)
+| .+++++++|| .|+++|-+.|| +|..+++. |.+.|++++ +.+++||.||+|. ....+.|-+-
T Consensus 20 ~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~-l~~l~~~f~----~~~v~vi~IS~D~-----~~~~~~~~~~i~~ 88 (224)
T 1prx_A 20 VG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGR-AAKLAPEFA----KRNVKLIALSIDS-----VEDHLAWSKDINA 88 (224)
T ss_dssp TE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHH-HHHHHHHHH----TTTEEEEEEESSC-----HHHHHHHHHHHHH
T ss_pred CC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHH-HHHHHHHHH----HCCCEEEEEcCCC-----HHHHHHHHHHHHH
Confidence 45 8999999998 56666689997 57788888 999999984 3469999999842 2233344332
Q ss_pred -h-----cCCCeeeeecCCcccHHHHHHHHHhhccC------------CccEEEEeCCCCceech
Q 039432 305 -S-----CSLPWYSVRQPQLLNSAVVNLIKQEWNFK------------EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 305 -~-----~~MPWyAVp~~~~i~~~~~r~ike~~~~~------------~iP~LVvL~pqGkv~~~ 351 (598)
. ..++|..+--++ . .+.+.|++. ..|..+++||+|++...
T Consensus 89 ~~~~~~~~~~~fpil~D~~---~----~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~ 146 (224)
T 1prx_A 89 YNSEEPTEKLPFPIIDDRN---R----ELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLS 146 (224)
T ss_dssp HTTSCCCSCCSSCEEECTT---C----HHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEE
T ss_pred hhCcccccCcCcceeecCc---h----HHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEE
Confidence 1 355654443221 2 344556663 37999999999998754
No 96
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.82 E-value=2.2e-05 Score=77.51 Aligned_cols=103 Identities=8% Similarity=0.078 Sum_probs=71.6
Q ss_pred CCceeecceecCc-EEEEEE-ecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHh---
Q 039432 231 KSEQLGVSELKDK-VVILLV-SKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELF--- 304 (598)
Q Consensus 231 ~~~kV~Is~L~gK-~VlLyf-Sal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~--- 304 (598)
+| +|.+++++|| .|+|+| .+.|| +|..+++. |.+.|++++ +.+++||.||+|. ....+.|-+-
T Consensus 18 ~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~-l~~l~~ef~----~~~v~vigIS~D~-----~~~~~~~~~~i~~ 86 (233)
T 2v2g_A 18 IG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGR-VIQLEGDFK----KRGVKLIALSCDN-----VADHKEWSEDVKC 86 (233)
T ss_dssp TC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHH-HHHTHHHHH----HTTEEEEEEESSC-----HHHHHHHHHHHHH
T ss_pred CC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHH-HHHHHHHHH----HcCCEEEEEcCCC-----HHHHHHHHHHHHH
Confidence 45 8999999998 777777 48887 57788888 999999984 2469999999842 2333445442
Q ss_pred --hc--CCCeeeeecCCcccHHHHHHHHHhhccC------------CccEEEEeCCCCceech
Q 039432 305 --SC--SLPWYSVRQPQLLNSAVVNLIKQEWNFK------------EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 305 --~~--~MPWyAVp~~~~i~~~~~r~ike~~~~~------------~iP~LVvL~pqGkv~~~ 351 (598)
.. .++|..+--++ +.+.+.|++. ..|..+|+||+|++...
T Consensus 87 ~~~~~~~~~fpil~D~~-------~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~ 142 (233)
T 2v2g_A 87 LSGVKGDMPYPIIADET-------RELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLS 142 (233)
T ss_dssp HHTCCSSCSSCEEECTT-------CHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEE
T ss_pred hhCcccCCceEEEECCh-------HHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEE
Confidence 12 55554433221 2344556663 47999999999999754
No 97
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.81 E-value=3.7e-05 Score=66.27 Aligned_cols=76 Identities=11% Similarity=0.098 Sum_probs=57.0
Q ss_pred cceecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeec
Q 039432 237 VSELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQ 315 (598)
Q Consensus 237 Is~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~ 315 (598)
....+||.|+++|.+.||+ |....+. |.+++++.. .+++++.|.+|. |++
T Consensus 21 ~~~~~~k~~lv~f~a~wC~~C~~~~~~-l~~~~~~~~-----~~v~~~~v~~~~-----d~~------------------ 71 (126)
T 2l57_A 21 EEAKEGIPTIIMFKTDTCPYCVEMQKE-LSYVSKERE-----GKFNIYYARLEE-----EKN------------------ 71 (126)
T ss_dssp TTCCSSSCEEEEEECSSCHHHHHHHHH-HHHHHHHSS-----SSCEEEEEETTS-----SHH------------------
T ss_pred HHHhCCCcEEEEEECCCCccHHHHHHH-HHHHHHHhc-----CCeEEEEEeCCC-----Cch------------------
Confidence 3446799999999999984 5556666 888888762 468888888410 211
Q ss_pred CCcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 316 PQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 316 ~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|++++++++|+++.
T Consensus 72 ---------~~~~~~~~v~~~Pt~~~~~~~G~~~~ 97 (126)
T 2l57_A 72 ---------IDLAYKYDANIVPTTVFLDKEGNKFY 97 (126)
T ss_dssp ---------HHHHHHTTCCSSSEEEEECTTCCEEE
T ss_pred ---------HHHHHHcCCcceeEEEEECCCCCEEE
Confidence 23567789999999999999999864
No 98
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.79 E-value=9e-06 Score=81.38 Aligned_cols=101 Identities=7% Similarity=0.177 Sum_probs=71.4
Q ss_pred eeec-cee--cCcEE-EEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhh---
Q 039432 234 QLGV-SEL--KDKVV-ILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFS--- 305 (598)
Q Consensus 234 kV~I-s~L--~gK~V-lLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~--- 305 (598)
++++ +++ +||.| +++|-+.|| +|..+++. |.+.|++.+ +.+++||.||+|. ......|....
T Consensus 22 ~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~-l~~l~~ef~----~~gv~VI~VS~Ds-----~~~~~~w~~~~~~~ 91 (249)
T 3a2v_A 22 VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVS-FARRYEDFQ----RLGVDLIGLSVDS-----VFSHIKWKEWIERH 91 (249)
T ss_dssp EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHH-HHHTHHHHH----HTTEEEEEEESSC-----HHHHHHHHHHHHHH
T ss_pred CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHH-HHHHHHHHH----hCCcEEEEEECCC-----HHHHHHHHHHHHHh
Confidence 7898 998 99964 557899997 57788888 999999984 2469999999842 33334443321
Q ss_pred --cCCCeeeeecCCcccHHHHHHHHHhhccC-------CccEEEEeCCCCceech
Q 039432 306 --CSLPWYSVRQPQLLNSAVVNLIKQEWNFK-------EEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 306 --~~MPWyAVp~~~~i~~~~~r~ike~~~~~-------~iP~LVvL~pqGkv~~~ 351 (598)
..++|..+--+ .+.+.+.|++. ..|.++++||+|++...
T Consensus 92 ~~~~i~fPil~D~-------~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~ 139 (249)
T 3a2v_A 92 IGVRIPFPIIADP-------QGTVARRLGLLHAESATHTVRGVFIVDARGVIRTM 139 (249)
T ss_dssp TCCCCCSCEEECT-------TSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEE
T ss_pred cCCCCceeEEECC-------chHHHHHhCCccccCCCcccceEEEECCCCeEEEE
Confidence 24554433222 23455667886 89999999999998754
No 99
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=97.78 E-value=7.2e-06 Score=74.82 Aligned_cols=100 Identities=13% Similarity=0.129 Sum_probs=60.2
Q ss_pred eecceecCcEEEEEEecCCCCChhhh-------hHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 235 LGVSELKDKVVILLVSKPELLPLEKL-------FLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 235 V~Is~L~gK~VlLyfSal~~~~~~~~-------~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
+.....+||.|+|.|.+.||++|..+ +. +.+.|++ +|.+|-|.+|... +......+...
T Consensus 40 ~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~-~~~~~~~--------~~~~v~v~~d~~~-----~~~~~~~~~~~ 105 (172)
T 3f9u_A 40 MEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPK-VSSIINN--------DYVLITLYVDNKT-----PLTEPVKIMEN 105 (172)
T ss_dssp HHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHH-HHHHHHH--------HCEEEEEETTCCC-----EEEEEEEEEET
T ss_pred HHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHH-HHHHhcC--------CEEEEEEecCccc-----ccchhhhhhhc
Confidence 34444679999999999998555543 33 4554433 4777777772111 00011111233
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
..+..++... ........+.|+++++|+++++|++|+++..
T Consensus 106 ~~~~~~~~~~---~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~ 146 (172)
T 3f9u_A 106 GTERTLRTVG---DKWSYLQRVKFGANAQPFYVLIDNEGNPLNK 146 (172)
T ss_dssp TEEEEEEEHH---HHHHHHHHHHHSCCCSSEEEEECTTSCBSSC
T ss_pred chhhhhhhhh---hhhhHHHHHHcCCCCcceEEEECCCCCEEee
Confidence 3444443311 1223334688999999999999999999864
No 100
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=97.74 E-value=5.3e-06 Score=75.27 Aligned_cols=89 Identities=13% Similarity=0.104 Sum_probs=58.7
Q ss_pred eeecceecCcEEEEEEe-cCCC-CChhhhhHHH---HHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCC
Q 039432 234 QLGVSELKDKVVILLVS-KPEL-LPLEKLFLLV---HQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSL 308 (598)
Q Consensus 234 kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L---~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~M 308 (598)
.+..+..+||.|+|+|. +.|| +|..+.+. | .++.+.. +.+|.+|-|..| ++. .
T Consensus 39 ~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~-l~~~~~~~~~~-----~~~~~~v~vd~~-------~~~--------~- 96 (154)
T 2ju5_A 39 ALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQ-ILQSSEFKHFA-----GVHLHMVEVDFP-------QKN--------H- 96 (154)
T ss_dssp HHHHHHHHCCCEEEEEECTTTCHHHHHHHHH-TTTSHHHHHHH-----HHHCEEEEEECC-------SSC--------C-
T ss_pred HHHHHHhCCCeEEEEEeCCCCCHhHHHHHHH-HhcCHHHHHHh-----cCcEEEEEecCc-------ccc--------C-
Confidence 45666788999999999 9998 45555555 5 3443322 234655555541 111 1
Q ss_pred CeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 309 PWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 309 PWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
++++. ....+.+.+.|++++.|+++++|++|+++..
T Consensus 97 ----~~~~~---~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~ 132 (154)
T 2ju5_A 97 ----QPEEQ---RQKNQELKAQYKVTGFPELVFIDAEGKQLAR 132 (154)
T ss_dssp ----CCHHH---HHHHHHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred ----CChhh---HhhHHHHHHHcCCCCCCEEEEEcCCCCEEEE
Confidence 22321 2334567889999999999999999999863
No 101
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.74 E-value=3.6e-05 Score=71.45 Aligned_cols=103 Identities=12% Similarity=0.111 Sum_probs=71.2
Q ss_pred cCCceeeccee-cCcEEEEEE-ecCCC-CChh-hhhHHHHHHhcCcCCCCCCCCe-EEEEEEcCCCCCCChHhHHHHHHh
Q 039432 230 MKSEQLGVSEL-KDKVVILLV-SKPEL-LPLE-KLFLLVHQTYDHPHNKNLEESY-KIVWVPISSSETWTDVEERNFELF 304 (598)
Q Consensus 230 ~~~~kV~Is~L-~gK~VlLyf-Sal~~-~~~~-~~~~~L~~iY~~l~~~~~~~~f-EIVwIpid~~~~W~D~de~~Fe~~ 304 (598)
.+|..|.++++ +||.|.|+| -+.|| +|.. +++. |.+.|++++ +.++ +||-|+.|. ....+.|-+-
T Consensus 18 ~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~-l~~~~~~~~----~~gv~~vv~Is~d~-----~~~~~~~~~~ 87 (167)
T 2wfc_A 18 TPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPG-YVEQAAAIH----GKGVDIIACMAVND-----SFVMDAWGKA 87 (167)
T ss_dssp STTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHH-HHHTHHHHH----HTTCCEEEEEESSC-----HHHHHHHHHH
T ss_pred CCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHH-HHHHHHHHH----HCCCCEEEEEeCCC-----HHHHHHHHHh
Confidence 45679999998 999888887 59997 4667 8998 999999984 2468 999999831 3344556543
Q ss_pred hcCCC--eeeeecCCcccHHHHHHHHHhhccCC-----------ccEEEEeCCCCceech
Q 039432 305 SCSLP--WYSVRQPQLLNSAVVNLIKQEWNFKE-----------EPIMVVLDSQGMVTNS 351 (598)
Q Consensus 305 ~~~MP--WyAVp~~~~i~~~~~r~ike~~~~~~-----------iP~LVvL~pqGkv~~~ 351 (598)
. .+| |..+.-++ . .+.+.|++.. .|..+|+ ++|+++..
T Consensus 88 ~-~~~~~fp~l~D~~---~----~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~ 138 (167)
T 2wfc_A 88 H-GADDKVQMLADPG---G----AFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKV 138 (167)
T ss_dssp T-TCTTTSEEEECTT---S----HHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEE
T ss_pred c-CCCcceEEEECCC---C----cHHHHcCCccccccccCcccceEEEEEE-eCCEEEEE
Confidence 2 344 43332221 2 3445566653 4999999 99999865
No 102
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=97.65 E-value=4.2e-05 Score=67.31 Aligned_cols=79 Identities=15% Similarity=0.102 Sum_probs=56.2
Q ss_pred eeecceecCcEEEEEEecCCCCChhh-hhHHH---HHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCC
Q 039432 234 QLGVSELKDKVVILLVSKPELLPLEK-LFLLV---HQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLP 309 (598)
Q Consensus 234 kV~Is~L~gK~VlLyfSal~~~~~~~-~~~~L---~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MP 309 (598)
+..++..+||.|+|+|.+.||++|.. .+. + .+++++.. ++.++.|.+| ..
T Consensus 23 ~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~-~~~~~~l~~~~~------~~~~~~vd~~-------~~------------ 76 (134)
T 2fwh_A 23 NQALVEAKGKPVMLDLYADWCVACKEFEKY-TFSDPQVQKALA------DTVLLQANVT-------AN------------ 76 (134)
T ss_dssp HHHHHHHTTSCEEEEEECTTCHHHHHHHHH-TTTSHHHHHHTT------TSEEEEEECT-------TC------------
T ss_pred HHHHHHhcCCcEEEEEECCCCHHHHHHHHH-hcCCHHHHHHhc------CcEEEEEeCC-------CC------------
Confidence 55667778999999999999855544 333 4 55665541 3777777761 11
Q ss_pred eeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 310 WYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 310 WyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
. .....+.+.|++++.|+++++|++|+++
T Consensus 77 -------~----~~~~~l~~~~~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 77 -------D----AQDVALLKHLNVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp -------C----HHHHHHHHHTTCCSSSEEEEECTTSCBC
T ss_pred -------c----chHHHHHHHcCCCCCCEEEEECCCCCEe
Confidence 0 1234567788999999999999999997
No 103
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.60 E-value=3.9e-05 Score=66.69 Aligned_cols=75 Identities=13% Similarity=0.069 Sum_probs=54.6
Q ss_pred ecCcEEEEEEecCCC-CChhhhhHHHH--HHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecC
Q 039432 240 LKDKVVILLVSKPEL-LPLEKLFLLVH--QTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQP 316 (598)
Q Consensus 240 L~gK~VlLyfSal~~-~~~~~~~~~L~--~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~ 316 (598)
.+||.|+|+|.+.|| +|....+. |. ++.+++. +++.++.|.+ +. ..
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~-l~~~~~~~~~~-----~~~~~~~vd~-------~~------------------~~ 75 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKS-LRNQKNTALIA-----KHFEVVKIDV-------GN------------------FD 75 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHH-HTSHHHHHHHH-----HHCEEEEEEC-------TT------------------TT
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHH-hCCHHHHHHhc-----CCEEEEEEeC-------Cc------------------cc
Confidence 469999999999998 45555565 77 7766652 3588888876 11 11
Q ss_pred CcccHHHHHHHHHhhcc---CCccEEEEeCCCCceech
Q 039432 317 QLLNSAVVNLIKQEWNF---KEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 317 ~~i~~~~~r~ike~~~~---~~iP~LVvL~pqGkv~~~ 351 (598)
. ...+.+.|++ ++.|+++++|++|+++..
T Consensus 76 ~------~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~ 107 (133)
T 3fk8_A 76 R------NLELSQAYGDPIQDGIPAVVVVNSDGKVRYT 107 (133)
T ss_dssp S------SHHHHHHTTCGGGGCSSEEEEECTTSCEEEE
T ss_pred c------hHHHHHHhCCccCCccceEEEECCCCCEEEE
Confidence 1 1236678899 999999999999998854
No 104
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.53 E-value=0.00011 Score=63.96 Aligned_cols=79 Identities=13% Similarity=0.135 Sum_probs=58.5
Q ss_pred CCceeecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCC
Q 039432 231 KSEQLGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLP 309 (598)
Q Consensus 231 ~~~kV~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MP 309 (598)
+++.+.....+||.|+++|.+.|| +|..+.+. |.+++++.. +++.++.|.+ |+..
T Consensus 31 ~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~-l~~~~~~~~-----~~v~~~~vd~-------d~~~----------- 86 (128)
T 3ul3_B 31 GSNIINGVNMKNTVIVLYFFAKWCQACTMQSTE-MDKLQKYYG-----KRIYLLKVDL-------DKNE----------- 86 (128)
T ss_dssp CCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHH-HHHHHHHHG-----GGEEEEEEEG-------GGCH-----------
T ss_pred CccHHHHHHccCCEEEEEEECCCCHHHHHHhHH-HHHHHHHhc-----CCeEEEEEEC-------CCCH-----------
Confidence 344456666889999999999998 45566666 888888762 3566666665 3221
Q ss_pred eeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 310 WYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 310 WyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|+++++ .+|+++.
T Consensus 87 ----------------~l~~~~~v~~~Pt~~~~-~~G~~~~ 110 (128)
T 3ul3_B 87 ----------------SLARKFSVKSLPTIILL-KNKTMLA 110 (128)
T ss_dssp ----------------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ----------------HHHHHcCCCCcCEEEEE-ECCEEEE
Confidence 45677899999999999 7898764
No 105
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.41 E-value=0.00022 Score=62.72 Aligned_cols=69 Identities=12% Similarity=0.026 Sum_probs=51.4
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.|+++|.+.||+ |....+. |.+++++.. +++.++-|.+ |++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~-l~~l~~~~~-----~~v~~~~vd~-------~~~---------------------- 81 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPI-LDELAKEYD-----GQIVIYKVDT-------EKE---------------------- 81 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHH-HHHHHHHTT-----TTCEEEEEET-------TTC----------------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHH-HHHHHHHhc-----CCEEEEEEeC-------CCC----------------------
Confidence 479999999999984 5555666 888887762 2466666655 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
..+.+.|++++.|+++++|++|+++
T Consensus 82 -----~~l~~~~~v~~~Pt~~~~~~~G~~~ 106 (136)
T 2l5l_A 82 -----QELAGAFGIRSIPSILFIPMEGKPE 106 (136)
T ss_dssp -----HHHHHHTTCCSSCEEEEECSSSCCE
T ss_pred -----HHHHHHcCCCCCCEEEEECCCCcEE
Confidence 1355678999999999999999986
No 106
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.33 E-value=0.00025 Score=59.99 Aligned_cols=69 Identities=17% Similarity=0.172 Sum_probs=52.6
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.|+++|.+.|| +|....+. |.+++++.. +++.++.|.+ |++ +
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~-l~~~~~~~~-----~~v~~~~vd~-------~~~------------------~--- 61 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPV-LEELDQEMG-----DKLKIVKIDV-------DEN------------------Q--- 61 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHH-HHHHHHHHT-----TTCEEEEEET-------TTC------------------C---
T ss_pred CCCEEEEEEECCCCHHHHHHHHH-HHHHHHHhC-----CCcEEEEEEC-------CCC------------------H---
Confidence 78999999999998 45566666 888888763 2577777776 221 1
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|+++++ ++|+++.
T Consensus 62 ------~l~~~~~v~~~Pt~~~~-~~G~~~~ 85 (112)
T 2voc_A 62 ------ETAGKYGVMSIPTLLVL-KDGEVVE 85 (112)
T ss_dssp ------SHHHHTTCCSBSEEEEE-ETTEEEE
T ss_pred ------HHHHHcCCCcccEEEEE-eCCEEEE
Confidence 14567899999999999 9999864
No 107
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.31 E-value=0.00017 Score=63.76 Aligned_cols=71 Identities=13% Similarity=0.130 Sum_probs=47.5
Q ss_pred eecceecCcEEEEEEecCCCCCh-hhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeee
Q 039432 235 LGVSELKDKVVILLVSKPELLPL-EKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSV 313 (598)
Q Consensus 235 V~Is~L~gK~VlLyfSal~~~~~-~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAV 313 (598)
.-++..+||.|+++|.+.||++| ...+. |.++.++ |.|+++.+| .++
T Consensus 33 ~~l~~~~~k~vvv~F~a~wC~~C~~~~p~-l~~l~~~---------~~v~~~~vd-------~~~--------------- 80 (133)
T 3cxg_A 33 QVFSSTQNSSIVIKFGAVWCKPCNKIKEY-FKNQLNY---------YYVTLVDID-------VDI--------------- 80 (133)
T ss_dssp HHHTC-CCSEEEEEEECTTCHHHHHTHHH-HHGGGGT---------EECEEEEEE-------TTT---------------
T ss_pred HHHHhcCCCEEEEEEECCCCHHHHHHHHH-HHHHHHh---------cCEEEEEEe-------ccc---------------
Confidence 34556779999999999998544 43344 5544333 567888872 121
Q ss_pred ecCCcccHHHHHHHHHhhccCCccEEEEe-CCCCc
Q 039432 314 RQPQLLNSAVVNLIKQEWNFKEEPIMVVL-DSQGM 347 (598)
Q Consensus 314 p~~~~i~~~~~r~ike~~~~~~iP~LVvL-~pqGk 347 (598)
...+.+.|++++.|+++++ +++|+
T Consensus 81 ----------~~~l~~~~~v~~~Pt~~~~~~~~g~ 105 (133)
T 3cxg_A 81 ----------HPKLNDQHNIKALPTFEFYFNLNNE 105 (133)
T ss_dssp ----------CHHHHHHTTCCSSSEEEEEEEETTE
T ss_pred ----------hHHHHHhcCCCCCCEEEEEEecCCC
Confidence 1235677899999999999 56666
No 108
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=97.26 E-value=0.00051 Score=64.46 Aligned_cols=104 Identities=12% Similarity=0.091 Sum_probs=68.0
Q ss_pred cCCceeecce-ecCcEEEEEE-ecCCCC-Ch-hhhhHHHHHHhcCcCCCCCCCCeEEEE-EEcCCCCCCChHhHHHHHHh
Q 039432 230 MKSEQLGVSE-LKDKVVILLV-SKPELL-PL-EKLFLLVHQTYDHPHNKNLEESYKIVW-VPISSSETWTDVEERNFELF 304 (598)
Q Consensus 230 ~~~~kV~Is~-L~gK~VlLyf-Sal~~~-~~-~~~~~~L~~iY~~l~~~~~~~~fEIVw-Ipid~~~~W~D~de~~Fe~~ 304 (598)
.+|..|.+++ ++||.|.|+| =+.||+ |. .+++. |.+.|++++ +.+++||. ||.|. ....+.|-+-
T Consensus 30 ~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~-l~~~~~~~~----~~gv~vv~~iS~D~-----~~~~~~f~~~ 99 (173)
T 3mng_A 30 EPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPG-FVEQAEALK----AKGVQVVACLSVND-----AFVTGEWGRA 99 (173)
T ss_dssp STTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHH-HHHTHHHHH----TTTCCEEEEEESSC-----HHHHHHHHHH
T ss_pred CCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHH-HHHHHHHHH----hCCCEEEEEEcCCC-----HHHHHHHHHH
Confidence 4677899999 5999766655 589984 55 37898 999999984 34699998 99831 3345566543
Q ss_pred hcCCC--eeeeecCCcccHHHHHHHHHhhccC-------------CccEEEEeCCCCceechh
Q 039432 305 SCSLP--WYSVRQPQLLNSAVVNLIKQEWNFK-------------EEPIMVVLDSQGMVTNSN 352 (598)
Q Consensus 305 ~~~MP--WyAVp~~~~i~~~~~r~ike~~~~~-------------~iP~LVvL~pqGkv~~~n 352 (598)
.. .| +-.+--++ . .+.+.|++. ..|...|+| +|++....
T Consensus 100 ~~-~~~~fp~l~D~~---~----~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~ 153 (173)
T 3mng_A 100 HK-AEGKVRLLADPT---G----AFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALN 153 (173)
T ss_dssp TT-CTTTCEEEECTT---C----HHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred hC-CCCceEEEECCC---h----HHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEE
Confidence 32 22 32222221 2 334445553 459999999 99997543
No 109
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.24 E-value=0.00042 Score=57.08 Aligned_cols=69 Identities=7% Similarity=0.034 Sum_probs=50.7
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.||.|+++|.+.||+ |....+. |.++.++.. +++.++.|.+ |++
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~-l~~~~~~~~-----~~v~~~~v~~-------~~~---------------------- 60 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPV-LEEFAEAHA-----DKVTVAKLNV-------DEN---------------------- 60 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHH-HHHHHHHST-----TTCEEEEEET-------TTC----------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHH-HHHHHHHhc-----CCcEEEEEEC-------cCC----------------------
Confidence 578999999999984 4555566 788777752 3477777776 221
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 61 -----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 85 (105)
T 1nsw_A 61 -----PETTSQFGIMSIPTLILF-KGGRPVK 85 (105)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHHcCCccccEEEEE-eCCeEEE
Confidence 125567899999999999 8999764
No 110
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.23 E-value=0.00015 Score=68.74 Aligned_cols=103 Identities=13% Similarity=0.026 Sum_probs=67.0
Q ss_pred CC-ceeecce-ecCcEEEE-EEecCCC-CChh-hhhHHHHHHhcCcCCCCCCCCeE-EEEEEcCCCCCCChHhHHHHHHh
Q 039432 231 KS-EQLGVSE-LKDKVVIL-LVSKPEL-LPLE-KLFLLVHQTYDHPHNKNLEESYK-IVWVPISSSETWTDVEERNFELF 304 (598)
Q Consensus 231 ~~-~kV~Is~-L~gK~VlL-yfSal~~-~~~~-~~~~~L~~iY~~l~~~~~~~~fE-IVwIpid~~~~W~D~de~~Fe~~ 304 (598)
+| ..|++++ ++||.|.| +|=+.|| +|.. +++. |.+.|++++ +.+++ ||-|+.|. ....+.|-+-
T Consensus 43 ~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~-l~~~~~~~~----~~gv~~vv~Is~d~-----~~~~~~f~~~ 112 (184)
T 3uma_A 43 DGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPG-YLENRDAIL----ARGVDDIAVVAVND-----LHVMGAWATH 112 (184)
T ss_dssp TEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHH-HHHTHHHHH----TTTCCEEEEEESSC-----HHHHHHHHHH
T ss_pred CCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHH-HHHHHHHHH----HcCCCEEEEEECCC-----HHHHHHHHHH
Confidence 56 7899999 89996555 5569998 4556 6898 999999984 23588 99999831 3345566543
Q ss_pred hcCCC--eeeeecCCcccHHHHHHHHHhhccC-----------CccEEEEeCCCCceechh
Q 039432 305 SCSLP--WYSVRQPQLLNSAVVNLIKQEWNFK-----------EEPIMVVLDSQGMVTNSN 352 (598)
Q Consensus 305 ~~~MP--WyAVp~~~~i~~~~~r~ike~~~~~-----------~iP~LVvL~pqGkv~~~n 352 (598)
. ..| +--+.-++ ..+.+.|++. ..|..+|++ +|+|....
T Consensus 113 ~-~~~~~fp~l~D~~-------~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~ 164 (184)
T 3uma_A 113 S-GGMGKIHFLSDWN-------AAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALN 164 (184)
T ss_dssp H-TCTTTSEEEECTT-------CHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEE
T ss_pred h-CCCCceEEEEcCc-------hHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEE
Confidence 3 233 33332222 2344555664 357788886 99997543
No 111
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.19 E-value=0.00079 Score=56.37 Aligned_cols=70 Identities=11% Similarity=0.223 Sum_probs=49.3
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.|+++|.+.||+ |....+. |.+++++++ ..++.++.|.+ |++
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~-~~~~~~~~~----~~~~~~~~vd~-------~~~---------------------- 65 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQV-FEAISNEPS----NSNVSFLSIDA-------DEN---------------------- 65 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHH-HHHHHHCGG----GTTSEEEEEET-------TTC----------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHH-HHHHHHhcC----CCCEEEEEEec-------ccC----------------------
Confidence 379999999999985 4455566 888888762 12466666665 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ .+|+++.
T Consensus 66 -----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 90 (112)
T 3d6i_A 66 -----SEISELFEISAVPYFIII-HKGTILK 90 (112)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHHcCCCcccEEEEE-ECCEEEE
Confidence 135677899999999998 6998865
No 112
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.18 E-value=0.00054 Score=56.74 Aligned_cols=69 Identities=12% Similarity=0.128 Sum_probs=50.1
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.||.|+++|.+.||+ |....+. |.++.++.. +++.++-|.+ |++ +
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~-l~~~~~~~~-----~~~~~~~v~~-------~~~------------------~--- 64 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPI-LDEIADEYQ-----GKLTVAKLNI-------DQN------------------P--- 64 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHH-HHHHHHHTT-----TTEEEEEEET-------TTC------------------T---
T ss_pred cCCeEEEEEECCCCHhHHHHHHH-HHHHHHHhC-----CCcEEEEEEC-------CCC------------------H---
Confidence 479999999999984 5555566 888877752 2466666665 211 1
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|+++++ ++|+++.
T Consensus 65 ------~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (108)
T 2trx_A 65 ------GTAPKYGIRGIPTLLLF-KNGEVAA 88 (108)
T ss_dssp ------THHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ------HHHHHcCCcccCEEEEE-eCCEEEE
Confidence 14567899999999999 8999864
No 113
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.18 E-value=0.00064 Score=58.23 Aligned_cols=71 Identities=15% Similarity=0.096 Sum_probs=51.4
Q ss_pred ceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecC
Q 039432 238 SELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQP 316 (598)
Q Consensus 238 s~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~ 316 (598)
...+||.|+++|.+.|| +|....+. |.+++++.. ++.++-|.+ |+.
T Consensus 27 ~~~~~k~vlv~F~a~wC~~C~~~~p~-l~~l~~~~~------~v~~~~vd~-------d~~------------------- 73 (116)
T 3qfa_C 27 DAAGDKLVVVDFSATWCGPSKMIKPF-FHSLSEKYS------NVIFLEVDV-------DDC------------------- 73 (116)
T ss_dssp HHHTTSCEEEEEECTTCHHHHHHHHH-HHHHHTTCT------TSEEEEEET-------TTT-------------------
T ss_pred HhcCCCEEEEEEECCCCHHHHHHHHH-HHHHHHHCC------CCEEEEEEC-------CCC-------------------
Confidence 34479999999999998 45566666 888888762 255555554 211
Q ss_pred CcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 317 QLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 317 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ .+|+.+.
T Consensus 74 --------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 98 (116)
T 3qfa_C 74 --------QDVASECEVKSMPTFQFF-KKGQKVG 98 (116)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-SSSSEEE
T ss_pred --------HHHHHHcCCccccEEEEE-eCCeEEE
Confidence 235677899999999999 7898764
No 114
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.15 E-value=0.00067 Score=55.66 Aligned_cols=69 Identities=9% Similarity=0.056 Sum_probs=51.3
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
++|.++++|.+.||+ |..+.+. |.+++++.. +++.++.|.+ |++.
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~-~~~~~~~~~-----~~~~~~~v~~-------~~~~--------------------- 63 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPV-LEELAADYE-----GKADILKLDV-------DENP--------------------- 63 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHH-HHHHHHHTT-----TTCEEEEEET-------TTCH---------------------
T ss_pred cCCcEEEEEECCCCHHHHHHhHH-HHHHHHHhc-----CCcEEEEEEC-------CcCH---------------------
Confidence 899999999999984 5555566 888888863 3377777775 2211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|++++++ +|+.+.
T Consensus 64 ------~~~~~~~v~~~Pt~~~~~-~G~~~~ 87 (106)
T 3die_A 64 ------STAAKYEVMSIPTLIVFK-DGQPVD 87 (106)
T ss_dssp ------HHHHHTTCCSBSEEEEEE-TTEEEE
T ss_pred ------HHHHhCCCcccCEEEEEe-CCeEEE
Confidence 245678999999999996 898764
No 115
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.12 E-value=0.0011 Score=55.08 Aligned_cols=69 Identities=12% Similarity=0.141 Sum_probs=51.5
Q ss_pred cCcEEEEEEecCCCCCh-hhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELLPL-EKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~~~-~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.++++|.+.||+.| ...+. |.++.++.. +++.++.|.+ |.+.
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~-l~~~~~~~~-----~~v~~~~v~~-------~~~~--------------------- 69 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPL-INLAANTYS-----DRLKVVKLEI-------DPNP--------------------- 69 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHH-HHHHHHHTT-----TTCEEEEEES-------TTCH---------------------
T ss_pred CCceEEEEEECCCCHHHHHhHHH-HHHHHHHhC-----CcEEEEEEEc-------CCCH---------------------
Confidence 58999999999998544 55555 788877752 3478888776 2211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|+++++ ++|+++.
T Consensus 70 ------~~~~~~~v~~~Pt~~~~-~~G~~~~ 93 (115)
T 1thx_A 70 ------TTVKKYKVEGVPALRLV-KGEQILD 93 (115)
T ss_dssp ------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ------HHHHHcCCCceeEEEEE-cCCEEEE
Confidence 25577899999999999 8999864
No 116
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.12 E-value=0.00099 Score=55.09 Aligned_cols=71 Identities=11% Similarity=0.030 Sum_probs=49.0
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
++|.++++|.+.||+ |....+. |.++.++.. ....++.++-|.. |+..
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~-~~~~~~~~~--~~~~~~~~~~vd~-------~~~~--------------------- 68 (111)
T 3uvt_A 20 AEGITFIKFYAPWCGHCKTLAPT-WEELSKKEF--PGLAGVKIAEVDC-------TAER--------------------- 68 (111)
T ss_dssp HSSEEEEEEECSSCHHHHHHHHH-HHHHHTCCC--CC-CCEEEEEEET-------TTCH---------------------
T ss_pred cCCcEEEEEECCCChhHHHhhHH-HHHHHHHhh--ccCCceEEEEEec-------cccH---------------------
Confidence 389999999999984 5555566 888887763 1223555555554 2111
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
.+.+.|++++.|+++++ ++|+.+
T Consensus 69 ------~l~~~~~v~~~Pt~~~~-~~g~~~ 91 (111)
T 3uvt_A 69 ------NICSKYSVRGYPTLLLF-RGGKKV 91 (111)
T ss_dssp ------HHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred ------hHHHhcCCCcccEEEEE-eCCcEE
Confidence 15677899999999998 778765
No 117
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.10 E-value=0.00061 Score=67.29 Aligned_cols=108 Identities=14% Similarity=0.174 Sum_probs=75.0
Q ss_pred CCceeecceecCcEEEEEEec-CCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHH-hhcC
Q 039432 231 KSEQLGVSELKDKVVILLVSK-PEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFEL-FSCS 307 (598)
Q Consensus 231 ~~~kV~Is~L~gK~VlLyfSa-l~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~-~~~~ 307 (598)
++.+|++++++||.|.|||=- .++ .|..|+.. +.+.|++.+ +.+.+|+-||.|. -...+.|-+ ...+
T Consensus 45 ~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~-f~~~~~eF~----~~g~~vigiS~Ds-----~~sh~~w~~~~~~~ 114 (219)
T 3tue_A 45 SFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIA-FSDSVSRFN----ELNCEVLACSIDS-----EYAHLQWTLQDRKK 114 (219)
T ss_dssp CEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHH-HHTTHHHHH----TTTEEEEEEESSC-----HHHHHHHHHSCGGG
T ss_pred CCcEEehHHhCCCEEEEEEecccCCCCCchhHhh-HHHHHhhhc----cCCcEEEEeeCCc-----hhhHHHHhhhhHHh
Confidence 445899999999999999984 443 68888888 899999984 4579999999853 445667753 3444
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhcc----CCc--cEEEEeCCCCceec
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNF----KEE--PIMVVLDSQGMVTN 350 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~----~~i--P~LVvL~pqGkv~~ 350 (598)
..-+.+|||-+-|. -+.+.+.|++ .+. -...|+||+|++..
T Consensus 115 ~~~~~l~fpllsD~--~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~ 161 (219)
T 3tue_A 115 GGLGTMAIPILADK--TKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQ 161 (219)
T ss_dssp TCCCSCSSCEEECT--TSHHHHHTTCEETTTTEECEEEEEECTTSBEEE
T ss_pred cCccccccccccCc--ccHHHHHcCCcccCCCeeEEEEEEECCCCeEEE
Confidence 45555666533222 2345555565 233 37899999998853
No 118
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.09 E-value=0.00062 Score=66.84 Aligned_cols=69 Identities=10% Similarity=0.185 Sum_probs=52.8
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.|+++|.+.|| +|..+.+. |.+++++.. +++.++-|.+ |+..
T Consensus 25 ~~~~v~v~f~a~wC~~C~~~~p~-~~~~~~~~~-----~~~~~~~vd~-------~~~~--------------------- 70 (287)
T 3qou_A 25 MTTPVLFYFWSERSQHCLQLTPI-LESLAAQYN-----GQFILAKLDC-------DAEQ--------------------- 70 (287)
T ss_dssp TTSCEEEEEECTTCTTTTTTHHH-HHHHHHHHT-----SSSEEEEEET-------TTCH---------------------
T ss_pred CCCeEEEEEECCCChHHHHHHHH-HHHHHHHcC-----CCeEEEEEeC-------ccCH---------------------
Confidence 48999999999998 55566676 888888863 3477777776 2211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|+++++|+++++ .+|+++.
T Consensus 71 ------~~~~~~~v~~~Pt~~~~-~~G~~~~ 94 (287)
T 3qou_A 71 ------MIAAQFGLRAIPTVYLF-QNGQPVD 94 (287)
T ss_dssp ------HHHHTTTCCSSSEEEEE-ETTEEEE
T ss_pred ------HHHHHcCCCCCCeEEEE-ECCEEEE
Confidence 46678899999999999 6898764
No 119
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.09 E-value=0.00074 Score=56.39 Aligned_cols=69 Identities=16% Similarity=0.052 Sum_probs=50.6
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.||.|+++|.+.||+ |....+. |.+++++.. +++.++.|.+ |.+
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~-l~~~~~~~~-----~~~~~~~v~~-------~~~---------------------- 66 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPS-LEAIAAEYG-----DKIEIVKLNI-------DEN---------------------- 66 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHH-HHHHHHHTT-----TTCEEEEEET-------TTC----------------------
T ss_pred CCCeEEEEEECCCCHhHHhcCHH-HHHHHHHhc-----CCeEEEEEEc-------CCC----------------------
Confidence 479999999999984 5555566 888887752 3477777776 221
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 67 -----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 91 (112)
T 1t00_A 67 -----PGTAAKYGVMSIPTLNVY-QGGEVAK 91 (112)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHhCCCCcccEEEEE-eCCEEEE
Confidence 125567899999999888 7998863
No 120
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.08 E-value=0.00072 Score=57.17 Aligned_cols=68 Identities=10% Similarity=0.059 Sum_probs=49.3
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.|+|+|.+.|| +|..+.+. |.+++++.. ++.++-|.+ |+.
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~-l~~l~~~~~------~~~~~~vd~-------~~~---------------------- 66 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPM-IEKFSEQYP------QADFYKLDV-------DEL---------------------- 66 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHH-HHHHHHHCT------TSEEEEEET-------TTC----------------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHH-HHHHHHHCC------CCEEEEEEC-------CCC----------------------
Confidence 48999999999998 45566666 888888752 255555554 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|++++++ +|+.+.
T Consensus 67 -----~~l~~~~~v~~~Pt~~~~~-~G~~~~ 91 (109)
T 3f3q_A 67 -----GDVAQKNEVSAMPTLLLFK-NGKEVA 91 (109)
T ss_dssp -----HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred -----HHHHHHcCCCccCEEEEEE-CCEEEE
Confidence 2256778999999999998 898764
No 121
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.08 E-value=0.00091 Score=54.82 Aligned_cols=69 Identities=6% Similarity=0.030 Sum_probs=50.4
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.++++|.+.||+ |....+. |.++.+++. +++.++-|.+ |.+
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~-l~~~~~~~~-----~~~~~~~v~~-------~~~---------------------- 61 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPI-LEEIAKEYE-----GKLLVAKLDV-------DEN---------------------- 61 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHH-HHHHHHHTB-----TTBEEEEEET-------TTC----------------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHH-HHHHHHHhh-----CceEEEEEEC-------CCC----------------------
Confidence 479999999999984 4455555 888877752 2466666665 221
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 62 -----~~~~~~~~v~~~Pt~~~~-~~g~~~~ 86 (109)
T 2yzu_A 62 -----PKTAMRYRVMSIPTVILF-KDGQPVE 86 (109)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HhHHHhCCCCcCCEEEEE-eCCcEee
Confidence 125667899999999999 8999864
No 122
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.07 E-value=0.00059 Score=56.92 Aligned_cols=68 Identities=10% Similarity=0.082 Sum_probs=43.7
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
++|.|+++|.+.||+ |....+. |.++.++. +++.++-|.+ |+..
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~-~~~~~~~~------~~~~~~~vd~-------~~~~--------------------- 61 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRK-VNYVLENY------NYVEKIEILL-------QDMQ--------------------- 61 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHH-HHHHHHTC------TTEEEEEEEE-------CCC----------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHH-HHHHHHHc------CCceEEEEEC-------CCCH---------------------
Confidence 589999999999984 5555566 88888775 2466666655 2111
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|+++++. +|+++.
T Consensus 62 ------~l~~~~~v~~~Pt~~~~~-~G~~~~ 85 (105)
T 4euy_A 62 ------EIAGRYAVFTGPTVLLFY-NGKEIL 85 (105)
T ss_dssp --------------CCCCEEEEEE-TTEEEE
T ss_pred ------HHHHhcCCCCCCEEEEEe-CCeEEE
Confidence 245667999999999995 898873
No 123
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.06 E-value=0.00071 Score=57.61 Aligned_cols=73 Identities=7% Similarity=0.090 Sum_probs=52.2
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.||.|+++|.+.||+ |..+.+. |.+++++.. .+|+++.+| ...
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~-l~~~~~~~~-------~~v~~~~~~-------~~~--------------------- 71 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGT-LSGVVAETK-------AHIYFINSE-------EPS--------------------- 71 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHH-HHHHHHHHC-------CCCEEEETT-------CGG---------------------
T ss_pred CCCeEEEEEECCCCccHHHHHHH-HHHHHHhcC-------CeEEEEECC-------CcC---------------------
Confidence 478999999999984 5566666 888887642 457888772 111
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+....+.+.+.|++++.|+++++. +|+++.
T Consensus 72 ~~~~~~~~~~~~~i~~~Pt~~~~~-~G~~~~ 101 (118)
T 1zma_A 72 QLNDLQAFRSRYGIPTVPGFVHIT-DGQINV 101 (118)
T ss_dssp GHHHHHHHHHHHTCCSSCEEEEEE-TTEEEE
T ss_pred cHHHHHHHHHHcCCCCCCeEEEEE-CCEEEE
Confidence 112344577889999999999995 888763
No 124
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.06 E-value=0.001 Score=54.86 Aligned_cols=69 Identities=14% Similarity=0.090 Sum_probs=49.8
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.||.++++|.+.||+ |....+. |.+++++.. +++.++.|.. |++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~-l~~~~~~~~-----~~~~~~~v~~-------~~~---------------------- 62 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPV-VDEIAGEYK-----DKLKCVKLNT-------DES---------------------- 62 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHH-HHHHHHHTT-----TTCEEEEEET-------TTC----------------------
T ss_pred CCCcEEEEEECCCCHhHHHHHHH-HHHHHHHhC-----CceEEEEEEC-------CCC----------------------
Confidence 479999999999984 4555566 888887752 2477777665 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 63 -----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 87 (107)
T 1dby_A 63 -----PNVASEYGIRSIPTIMVF-KGGKKCE 87 (107)
T ss_dssp -----HHHHHHHTCCSSCEEEEE-SSSSEEE
T ss_pred -----HHHHHHCCCCcCCEEEEE-eCCEEEE
Confidence 135567899999999888 7998864
No 125
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=96.10 E-value=9.4e-05 Score=63.88 Aligned_cols=79 Identities=15% Similarity=0.211 Sum_probs=51.6
Q ss_pred CceeecceecCcEEEEEEecCCCCCh-hhhhHHH---HHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 232 SEQLGVSELKDKVVILLVSKPELLPL-EKLFLLV---HQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 232 ~~kV~Is~L~gK~VlLyfSal~~~~~-~~~~~~L---~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
+..+.....+||.|+|+|.+.||++| ...+. | .++.+.+ ++++.++-|.+ |.++
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~-~~~~~~~~~~~-----~~~~~~~~vd~-------~~~~--------- 66 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTF-VLSDPGVSRLL-----EARFVVASVSV-------DTPE--------- 66 (130)
Confidence 34566667889999999999998544 44444 5 4544443 23455555444 2111
Q ss_pred CCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCC-Cce
Q 039432 308 LPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQ-GMV 348 (598)
Q Consensus 308 MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pq-Gkv 348 (598)
...+.+.|++++.|+++++||+ |++
T Consensus 67 ----------------~~~~~~~~~v~~~Pt~~~~d~~~G~~ 92 (130)
T 2lst_A 67 ----------------GQELARRYRVPGTPTFVFLVPKAGAW 92 (130)
Confidence 1235567799999999999985 776
No 126
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.03 E-value=0.0009 Score=57.30 Aligned_cols=69 Identities=13% Similarity=0.070 Sum_probs=51.1
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.||.|+|+|.+.||+ |....+. |.+++++.. +++.++.|.+ |++
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~-l~~~~~~~~-----~~v~~~~vd~-------d~~---------------------- 74 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPR-LEKMVAKQH-----GKVVMAKVDI-------DDH---------------------- 74 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHH-HHHHHHHTT-----TSSEEEEEET-------TTT----------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHH-HHHHHHHhc-----CCeEEEEEeC-------CCC----------------------
Confidence 479999999999984 5555566 888887752 3477777665 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 75 -----~~l~~~~~v~~~Pt~~~~-~~G~~~~ 99 (119)
T 1w4v_A 75 -----TDLAIEYEVSAVPTVLAM-KNGDVVD 99 (119)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHHcCCCcccEEEEE-eCCcEEE
Confidence 135677899999999999 8999864
No 127
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.02 E-value=0.00085 Score=55.11 Aligned_cols=69 Identities=10% Similarity=0.003 Sum_probs=50.6
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.|+++|.+.||+ |....+. |.++.++.. +++.++.|.+ |.+.
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~-~~~~~~~~~-----~~~~~~~v~~-------~~~~--------------------- 64 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPA-LGEIGKEFA-----GKVTVAKVNI-------DDNP--------------------- 64 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHH-HHHHHHHHT-----TSEEEEEEET-------TTCC---------------------
T ss_pred CCCEEEEEEECCCChhHHHHhHH-HHHHHHHhC-----CcEEEEEEEC-------CCCH---------------------
Confidence 579999999999984 5555555 788877752 2577777665 2110
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|+++++ ++|+++.
T Consensus 65 ------~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (107)
T 2i4a_A 65 ------ETPNAYQVRSIPTLMLV-RDGKVID 88 (107)
T ss_dssp ------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ------HHHHhcCCCccCEEEEE-eCCEEEE
Confidence 25567899999999999 8999864
No 128
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.00 E-value=0.00099 Score=54.63 Aligned_cols=71 Identities=17% Similarity=0.089 Sum_probs=50.3
Q ss_pred eecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCC
Q 039432 239 ELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQ 317 (598)
Q Consensus 239 ~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~ 317 (598)
..+||.++++|.+.||+ |....+. |.++.++.. +++.++.|.. |+.
T Consensus 17 ~~~~~~~vv~f~~~~C~~C~~~~~~-l~~~~~~~~-----~~~~~~~v~~-------~~~-------------------- 63 (106)
T 1xwb_A 17 KASGKLVVLDFFATWCGPCKMISPK-LVELSTQFA-----DNVVVLKVDV-------DEC-------------------- 63 (106)
T ss_dssp HHTTSEEEEEEECTTCHHHHHHHHH-HHHHHHHTT-----TTEEEEEEET-------TTC--------------------
T ss_pred hcCCCEEEEEEECCcCHHHHHhhHH-HHHHHHHhC-----CCeEEEEEec-------cch--------------------
Confidence 34789999999999984 4455555 788777652 4577777665 211
Q ss_pred cccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 318 LLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 318 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 64 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (106)
T 1xwb_A 64 -------EDIAMEYNISSMPTFVFL-KNGVKVE 88 (106)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-cCCcEEE
Confidence 125567899999998777 6898764
No 129
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=96.99 E-value=0.0033 Score=62.19 Aligned_cols=101 Identities=6% Similarity=0.009 Sum_probs=64.9
Q ss_pred cCCceeecceecCcEEEEEEecCC-CC-Ch-----hhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHH
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPE-LL-PL-----EKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFE 302 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~-~~-~~-----~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe 302 (598)
.+|..|++++++||.|.|+|=..| || |. .+++. |.+.| .+++||-||.|. ....+.|-
T Consensus 36 ~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~-~~~~~---------~gv~VvgIS~Ds-----~~~~~~f~ 100 (224)
T 3keb_A 36 DQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRR-FLDSW---------PHLKLIVITVDS-----PSSLARAR 100 (224)
T ss_dssp TTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHH-HHTTC---------TTSEEEEEESSC-----HHHHHHHH
T ss_pred CCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHH-HHHHc---------CCCEEEEEECCC-----HHHHHHHH
Confidence 467799999999999999998887 64 55 45554 44442 358999999832 33456665
Q ss_pred HhhcCCCeeeeecCCcccHHHHHHHHHhhccCC---------ccEEEEeCCCCceech
Q 039432 303 LFSCSLPWYSVRQPQLLNSAVVNLIKQEWNFKE---------EPIMVVLDSQGMVTNS 351 (598)
Q Consensus 303 ~~~~~MPWyAVp~~~~i~~~~~r~ike~~~~~~---------iP~LVvL~pqGkv~~~ 351 (598)
+-..--++.-+- |.. -..+.+.|++.. .|...|+|++|++...
T Consensus 101 ~~~gl~~fplLs-----D~~-~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~ 152 (224)
T 3keb_A 101 HEHGLPNIALLS-----TLR-GRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYS 152 (224)
T ss_dssp HHHCCTTCEEEE-----STT-CTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEE
T ss_pred HHcCCCCceEEE-----cCC-chHHHHHhCCccccccccCCccCEEEEEcCCCEEEEE
Confidence 544321221111 211 123445566653 7999999999999853
No 130
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=96.98 E-value=0.0012 Score=53.56 Aligned_cols=68 Identities=7% Similarity=0.027 Sum_probs=49.9
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
++|.|+++|.+.||+ |....+. |.++.++.. + +.++.|.+ |.+
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~-~~~~~~~~~-----~-~~~~~v~~-------~~~---------------------- 58 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPI-IEELAEDYP-----Q-VGFGKLNS-------DEN---------------------- 58 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHH-HHHHHHHCT-----T-SEEEEEET-------TTC----------------------
T ss_pred cCCcEEEEEECCCChhHHHHhHH-HHHHHHHcC-----C-ceEEEEEC-------CCC----------------------
Confidence 589999999999984 4455555 788777652 2 67777665 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 59 -----~~~~~~~~v~~~Pt~~~~-~~g~~~~ 83 (104)
T 2e0q_A 59 -----PDIAARYGVMSLPTVIFF-KDGEPVD 83 (104)
T ss_dssp -----HHHHHHTTCCSSCEEEEE-ETTEEEE
T ss_pred -----HHHHHhCCccccCEEEEE-ECCeEhh
Confidence 125667899999999999 8999864
No 131
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=96.97 E-value=0.00066 Score=59.52 Aligned_cols=69 Identities=10% Similarity=0.105 Sum_probs=51.0
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
++|.|+++|.+.||+ |....+. |.++.++.. +++.++.|.+ |++.
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~-l~~l~~~~~-----~~v~~~~vd~-------~~~~--------------------- 84 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPI-LDEIADEYQ-----GKLTVAKLNI-------DQNP--------------------- 84 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHH-HHHHHHHTT-----TTEEEEEEET-------TTCC---------------------
T ss_pred cCCEEEEEEECCCCHHHHHHhHH-HHHHHHHhc-----CCeEEEEEEC-------CCCH---------------------
Confidence 479999999999984 5555566 888887752 3477777776 2111
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|+++++ ++|+++.
T Consensus 85 ------~l~~~~~v~~~Pt~~~~-~~G~~~~ 108 (128)
T 2o8v_B 85 ------GTAPKYGIRGIPTLLLF-KNGEVAA 108 (128)
T ss_dssp ------TTSGGGTCCSSSEEEEE-ETTEEEE
T ss_pred ------HHHHHcCCCccCEEEEE-eCCEEEE
Confidence 14567899999999999 8999864
No 132
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=96.97 E-value=0.00089 Score=66.00 Aligned_cols=107 Identities=9% Similarity=0.177 Sum_probs=71.2
Q ss_pred CceeecceecCcEEEEEEe-cCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhh-cCC
Q 039432 232 SEQLGVSELKDKVVILLVS-KPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFS-CSL 308 (598)
Q Consensus 232 ~~kV~Is~L~gK~VlLyfS-al~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~-~~M 308 (598)
+.+|++++++||.|.|||= +.|+ .|..++.. +.+.|++.+ +.+.||+-||.|. ......|.+-. ...
T Consensus 42 ~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~-f~~~~~~f~----~~g~~vigiS~Ds-----~~sh~aw~~~~~~~~ 111 (216)
T 3sbc_A 42 FDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIA-FSEAAKKFE----EQGAQVLFASTDS-----EYSLLAWTNIPRKEG 111 (216)
T ss_dssp EEEECGGGGTTSEEEEEECSCTTSSHHHHHHHH-HHHHHHHHH----HTTEEEEEEESSC-----HHHHHHHHTSCGGGT
T ss_pred CcEEehHHhCCCeEEEEEEcCCCCCcCchhhhH-HHHhHHhhc----cCCceEEEeecCc-----hhhHHHHHHHHHHhC
Confidence 3489999999999999997 5554 57788888 899999983 3579999999843 44556665422 221
Q ss_pred CeeeeecCCcccHHHHHHHHHhhccC------CccEEEEeCCCCceec
Q 039432 309 PWYSVRQPQLLNSAVVNLIKQEWNFK------EEPIMVVLDSQGMVTN 350 (598)
Q Consensus 309 PWyAVp~~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~ 350 (598)
.-..++||-+.|. -+.+.+.|++- ..+...|+||+|++..
T Consensus 112 ~~~~l~fpllsD~--~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~ 157 (216)
T 3sbc_A 112 GLGPINIPLLADT--NHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRH 157 (216)
T ss_dssp CCCSCSSCEEECT--TSHHHHHHTCEETTTTEECEEEEEECTTSBEEE
T ss_pred CccCcccceEeCC--CCHHHHHcCCeeccCCceeeEEEEECCCCeEEE
Confidence 1223444322221 23344555552 2478999999999853
No 133
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.97 E-value=0.0026 Score=53.76 Aligned_cols=69 Identities=14% Similarity=0.118 Sum_probs=48.9
Q ss_pred ecCcEEEEEEecCCCCChhh-hhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCc
Q 039432 240 LKDKVVILLVSKPELLPLEK-LFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQL 318 (598)
Q Consensus 240 L~gK~VlLyfSal~~~~~~~-~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~ 318 (598)
.++|.++++|.+.||++|.. .+. |.++.++. .++.++.|.+ |+.
T Consensus 17 ~~~~~~vv~f~a~wC~~C~~~~~~-l~~~~~~~------~~v~~~~vd~-------~~~--------------------- 61 (110)
T 2l6c_A 17 EGLSDAIVFFHKNLCPHCKNMEKV-LDKFGARA------PQVAISSVDS-------EAR--------------------- 61 (110)
T ss_dssp TTCSEEEEEEECSSCSTHHHHHHH-HHHHHTTC------TTSCEEEEEG-------GGC---------------------
T ss_pred HcCCCEEEEEECCCCHhHHHHHHH-HHHHHHHC------CCcEEEEEcC-------cCC---------------------
Confidence 35799999999999855544 454 77776653 1466666665 221
Q ss_pred ccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 319 LNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 319 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ .+|+++.
T Consensus 62 ------~~l~~~~~v~~~Pt~~~~-~~G~~v~ 86 (110)
T 2l6c_A 62 ------PELMKELGFERVPTLVFI-RDGKVAK 86 (110)
T ss_dssp ------HHHHHHTTCCSSCEEEEE-ESSSEEE
T ss_pred ------HHHHHHcCCcccCEEEEE-ECCEEEE
Confidence 125677899999999999 8998864
No 134
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=96.95 E-value=0.0011 Score=55.21 Aligned_cols=68 Identities=6% Similarity=-0.038 Sum_probs=48.8
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
++|.|+++|.+.||+ |....+. |.++.++. .++.++.|.+ |+.
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~-~~~~~~~~------~~~~~~~vd~-------~~~---------------------- 63 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPA-FSSMSNKY------PQAVFLEVDV-------HQC---------------------- 63 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHH-HHHHHHHC------TTSEEEEEET-------TTS----------------------
T ss_pred CCCEEEEEEECCCChhhHHHHHH-HHHHHHHC------CCcEEEEEEC-------ccC----------------------
Confidence 589999999999984 4455555 77777664 2466666665 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+.+.+.|++++.|+++++ .+|+.+.
T Consensus 64 -----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (107)
T 1gh2_A 64 -----QGTAATNNISATPTFQFF-RNKVRID 88 (107)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHhcCCCcccEEEEE-ECCeEEE
Confidence 225577899999999999 7888764
No 135
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.95 E-value=0.0013 Score=57.16 Aligned_cols=68 Identities=10% Similarity=0.107 Sum_probs=49.1
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.|+++|.+.||+ |..+.+. |.+++++.. ++.++.|.+ |++
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~-l~~l~~~~~------~v~~~~vd~-------d~~---------------------- 80 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPF-FADLAKKLP------NVLFLKVDT-------DEL---------------------- 80 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHH-HHHHHHHCS------SEEEEEEET-------TTS----------------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHH-HHHHHHHCC------CcEEEEEEC-------ccC----------------------
Confidence 689999999999984 5555566 888877751 355555554 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 81 -----~~l~~~~~v~~~Pt~~~~-~~G~~~~ 105 (124)
T 1xfl_A 81 -----KSVASDWAIQAMPTFMFL-KEGKILD 105 (124)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHHcCCCccCEEEEE-ECCEEEE
Confidence 135567899999999887 8999864
No 136
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=96.94 E-value=0.0011 Score=56.75 Aligned_cols=68 Identities=10% Similarity=0.016 Sum_probs=49.1
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.|+++|.+.||+ |....+. |.+++++.. ++.++.|.+ |++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~-l~~~~~~~~------~v~~~~vd~-------~~~---------------------- 72 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPH-LTKLIQAYP------DVRFVKCDV-------DES---------------------- 72 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHH-HHHHHHHCT------TSEEEEEET-------TTC----------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHH-HHHHHHHCC------CCEEEEEEC-------CCC----------------------
Confidence 589999999999984 5555566 888877752 166666665 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 73 -----~~l~~~~~v~~~Pt~~~~-~~G~~~~ 97 (114)
T 2oe3_A 73 -----PDIAKECEVTAMPTFVLG-KDGQLIG 97 (114)
T ss_dssp -----HHHHHHTTCCSBSEEEEE-ETTEEEE
T ss_pred -----HHHHHHCCCCcccEEEEE-eCCeEEE
Confidence 125677899999999887 8999863
No 137
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.94 E-value=0.002 Score=55.32 Aligned_cols=67 Identities=9% Similarity=0.015 Sum_probs=49.5
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.|+++|.+.|| +|....+. |.++++++. +.+.++.|.+ |+.
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~-~~~~~~~~~-----~~~~~~~vd~-------~~~---------------------- 78 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPE-WKKAATALK-----DVVKVGAVNA-------DKH---------------------- 78 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHH-HHHHHHHTT-----TTSEEEEEET-------TTC----------------------
T ss_pred CCCeEEEEEECCCCHHHHhhCHH-HHHHHHHhc-----CceEEEEEeC-------CCC----------------------
Confidence 37899999999998 55566666 888888763 2366666554 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCc
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGM 347 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGk 347 (598)
+.+.+.|++++.|++++++++|+
T Consensus 79 -----~~l~~~~~v~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 79 -----QSLGGQYGVQGFPTIKIFGANKN 101 (130)
T ss_dssp -----HHHHHHHTCCSSSEEEEESSCTT
T ss_pred -----HHHHHHcCCCccCEEEEEeCCCC
Confidence 13556789999999999999987
No 138
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=96.94 E-value=0.00081 Score=58.75 Aligned_cols=70 Identities=14% Similarity=0.153 Sum_probs=51.4
Q ss_pred eecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCC
Q 039432 239 ELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQ 317 (598)
Q Consensus 239 ~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~ 317 (598)
..+||.|+++|.+.|| +|....+. |.+++++. .++.++.|.+ |+.
T Consensus 43 ~~~~k~vvv~f~a~wC~~C~~~~~~-l~~l~~~~------~~v~~~~v~~-------~~~-------------------- 88 (139)
T 3d22_A 43 SRDGKIVLANFSARWCGPSRQIAPY-YIELSENY------PSLMFLVIDV-------DEL-------------------- 88 (139)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHH-HHHHHHHC------TTSEEEEEET-------TTS--------------------
T ss_pred hhcCCEEEEEEECCCCHHHHHHHHH-HHHHHHHC------CCCEEEEEeC-------ccc--------------------
Confidence 3579999999999998 45566666 88887764 1366666665 211
Q ss_pred cccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 318 LLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 318 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 89 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 113 (139)
T 3d22_A 89 -------SDFSASWEIKATPTFFFL-RDGQQVD 113 (139)
T ss_dssp -------HHHHHHTTCCEESEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-cCCeEEE
Confidence 235677899999999988 8999874
No 139
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=96.93 E-value=0.00089 Score=56.09 Aligned_cols=72 Identities=11% Similarity=0.001 Sum_probs=49.0
Q ss_pred ceecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecC
Q 039432 238 SELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQP 316 (598)
Q Consensus 238 s~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~ 316 (598)
...+||.|+++|.+.||+ |....+. |.+++++.. ++.++-|.+ |.+
T Consensus 20 ~~~~~~~vlv~f~a~wC~~C~~~~~~-l~~~~~~~~------~v~~~~vd~-------~~~------------------- 66 (111)
T 2pu9_C 20 KAAGDKPVVLDMFTQWCGPSKAMAPK-YEKLAEEYL------DVIFLKLDC-------NQE------------------- 66 (111)
T ss_dssp TTCTTSCEEEEEECTTCHHHHHHHHH-HHHHHHHCT------TSEEEEEEC-------SST-------------------
T ss_pred HhcCCCEEEEEEECCcCHhHHHHCHH-HHHHHHHCC------CeEEEEEec-------Ccc-------------------
Confidence 334689999999999984 5566666 888887752 255555444 100
Q ss_pred CcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 317 QLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 317 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
...+.+.|++++.|++ +++++|+++.
T Consensus 67 -------~~~~~~~~~v~~~Pt~-~~~~~G~~~~ 92 (111)
T 2pu9_C 67 -------NKTLAKELGIRVVPTF-KILKENSVVG 92 (111)
T ss_dssp -------THHHHHHHCCSBSSEE-EEESSSSEEE
T ss_pred -------hHHHHHHcCCCeeeEE-EEEeCCcEEE
Confidence 1235577899999995 5568999764
No 140
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=96.93 E-value=0.0014 Score=53.79 Aligned_cols=69 Identities=9% Similarity=0.075 Sum_probs=49.7
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.|+++|.+.||+ |..+.+. |.++.++.. +++.++-|.+ |+..
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~-~~~~~~~~~-----~~~~~~~v~~-------~~~~--------------------- 65 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPI-YKKVAEKYK-----GKAVFGRLNV-------DENQ--------------------- 65 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHH-HHHHHHHTT-----TTSEEEEEET-------TTCH---------------------
T ss_pred cCCeEEEEEECCCCHHHHhhhHH-HHHHHHHhC-----CCceEEEEcc-------ccCH---------------------
Confidence 589999999999984 5555566 888887762 2455555554 2111
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|+++++ ++|+.+.
T Consensus 66 ------~~~~~~~i~~~Pt~~~~-~~g~~~~ 89 (109)
T 3tco_A 66 ------KIADKYSVLNIPTTLIF-VNGQLVD 89 (109)
T ss_dssp ------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ------HHHHhcCcccCCEEEEE-cCCcEEE
Confidence 24567899999999999 9998764
No 141
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.92 E-value=0.0006 Score=58.58 Aligned_cols=69 Identities=9% Similarity=-0.026 Sum_probs=49.1
Q ss_pred ecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCc
Q 039432 240 LKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQL 318 (598)
Q Consensus 240 L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~ 318 (598)
+++ .|+++|.+.|| +|..+.+. |.+++++.. +.++.++-|.+ |++
T Consensus 21 ~~~-~vlv~f~a~wC~~C~~~~p~-~~~~~~~~~----~~~v~~~~vd~-------~~~--------------------- 66 (126)
T 1x5e_A 21 LEG-DWMIEFYAPWCPACQNLQPE-WESFAEWGE----DLEVNIAKVDV-------TEQ--------------------- 66 (126)
T ss_dssp TSS-EEEEEEECSSCHHHHHHHHH-HHHHHHHHG----GGTCEEEEEET-------TTC---------------------
T ss_pred hCC-CEEEEEECCCCHHHHHHhHH-HHHHHHHhc----cCCeEEEEEEC-------cCC---------------------
Confidence 445 49999999998 45566666 888887753 12466666665 211
Q ss_pred ccHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 319 LNSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 319 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
+.+.+.|++++.|+++++ ++|++.
T Consensus 67 ------~~~~~~~~v~~~Pt~~~~-~~G~~~ 90 (126)
T 1x5e_A 67 ------PGLSGRFIINALPTIYHC-KDGEFR 90 (126)
T ss_dssp ------HHHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred ------HHHHHHcCCcccCEEEEE-eCCeEE
Confidence 126677899999999999 899864
No 142
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.92 E-value=0.0011 Score=59.65 Aligned_cols=68 Identities=4% Similarity=0.046 Sum_probs=50.0
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.|+++|.+.||+ |....+. |.+++++. .++.++-|.+ |+.
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~-l~~l~~~~------~~v~~~~vd~-------~~~---------------------- 74 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEV-MAELAKEL------PQVSFVKLEA-------EGV---------------------- 74 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHH-HHHHHHHC------TTSEEEEEET-------TTS----------------------
T ss_pred CCCeEEEEEECCCCHhHHHHHHH-HHHHHHHc------CCeEEEEEEC-------CCC----------------------
Confidence 489999999999984 5555555 77777764 2466666665 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+.+.+.|++++.|++++++ +|+++.
T Consensus 75 -----~~l~~~~~v~~~Pt~~~~~-~G~~~~ 99 (153)
T 2wz9_A 75 -----PEVSEKYEISSVPTFLFFK-NSQKID 99 (153)
T ss_dssp -----HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred -----HHHHHHcCCCCCCEEEEEE-CCEEEE
Confidence 1356778999999999999 999864
No 143
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.91 E-value=0.00067 Score=58.24 Aligned_cols=72 Identities=10% Similarity=0.081 Sum_probs=49.6
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.|+++|.+.|| +|..+.+. |.++++++.. ..+.++.++-|.+ |++
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~-~~~~~~~~~~-~~~~~~~~~~vd~-------~~~---------------------- 72 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPE-WAAAASEVKE-QTKGKVKLAAVDA-------TVN---------------------- 72 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHH-HHHHHHHHHH-HTTTSEEEEEEET-------TTC----------------------
T ss_pred CCCeEEEEEECCCCHHHHhhcHH-HHHHHHHHHh-hcCCcEEEEEEEC-------CCC----------------------
Confidence 37999999999998 45555666 7888777621 1124466666554 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
+.+.+.|++++.|+++++++ |+.+
T Consensus 73 -----~~l~~~~~v~~~Pt~~~~~~-g~~~ 96 (133)
T 1x5d_A 73 -----QVLASRYGIRGFPTIKIFQK-GESP 96 (133)
T ss_dssp -----CHHHHHHTCCSSSEEEEEET-TEEE
T ss_pred -----HHHHHhCCCCeeCeEEEEeC-CCce
Confidence 13566789999999999998 7754
No 144
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=96.90 E-value=0.0011 Score=61.40 Aligned_cols=101 Identities=14% Similarity=0.074 Sum_probs=64.6
Q ss_pred ceeeccee-cCc-EEEEEEecCCC-CChhh-hhHHHHHHhcCcCCCCCCCCeE-EEEEEcCCCCCCChHhHHHHHHhhcC
Q 039432 233 EQLGVSEL-KDK-VVILLVSKPEL-LPLEK-LFLLVHQTYDHPHNKNLEESYK-IVWVPISSSETWTDVEERNFELFSCS 307 (598)
Q Consensus 233 ~kV~Is~L-~gK-~VlLyfSal~~-~~~~~-~~~~L~~iY~~l~~~~~~~~fE-IVwIpid~~~~W~D~de~~Fe~~~~~ 307 (598)
.+|.++++ +|| .|+++|=+.|| +|..+ ++. |.+.|++++ +.+++ ||-|+.|. ....+.|-+-..-
T Consensus 33 ~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~-l~~~~~~~~----~~g~~~vv~Is~d~-----~~~~~~~~~~~~~ 102 (171)
T 2pwj_A 33 STTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPP-YKHNIDKFK----AKGVDSVICVAIND-----PYTVNAWAEKIQA 102 (171)
T ss_dssp CCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHH-HHHTHHHHH----HTTCSEEEEEESSC-----HHHHHHHHHHTTC
T ss_pred ceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHH-HHHHHHHHH----HCCCCEEEEEeCCC-----HHHHHHHHHHhCC
Confidence 68999996 996 66677899997 56677 898 999999983 23588 99999831 3345566554431
Q ss_pred -CCeeeeecCCcccHHHHHHHHHhhccC--------C---ccEEEEeCCCCceech
Q 039432 308 -LPWYSVRQPQLLNSAVVNLIKQEWNFK--------E---EPIMVVLDSQGMVTNS 351 (598)
Q Consensus 308 -MPWyAVp~~~~i~~~~~r~ike~~~~~--------~---iP~LVvL~pqGkv~~~ 351 (598)
.|+..+--+ +.+.. +.|++. | .|.-+++| +|++...
T Consensus 103 ~~~fp~l~D~---~~~~~----~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~ 150 (171)
T 2pwj_A 103 KDAIEFYGDF---DGSFH----KSLELTTDLSAGLLGIRSERWSAYVV-DGKVKAL 150 (171)
T ss_dssp TTTSEEEECT---TCHHH----HHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEE
T ss_pred CCceEEEECC---ccHHH----HHhCCccccccccCCcccceeEEEEE-CCEEEEE
Confidence 223222222 22333 344553 1 45666667 9999864
No 145
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=96.90 E-value=0.00076 Score=58.08 Aligned_cols=67 Identities=6% Similarity=-0.016 Sum_probs=49.2
Q ss_pred CcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCccc
Q 039432 242 DKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLN 320 (598)
Q Consensus 242 gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~ 320 (598)
||.|+++|.+.||+ |....+. |.+++++. .++.++.|.+ |+.
T Consensus 23 ~~~vlv~f~a~wC~~C~~~~~~-l~~l~~~~------~~v~~~~vd~-------~~~----------------------- 65 (118)
T 2f51_A 23 PGLVLVDFFATWCGPCQRLGQI-LPSIAEAN------KDVTFIKVDV-------DKN----------------------- 65 (118)
T ss_dssp SSCEEEEEECTTCHHHHHHHHH-HHHHHHHC------TTSEEEEEET-------TTC-----------------------
T ss_pred CCEEEEEEECCCCHHHHHHHHH-HHHHHHHC------CCeEEEEEEC-------CCC-----------------------
Confidence 89999999999984 5555555 78877764 3466777665 221
Q ss_pred HHHHHHHHHhhccCCccEEEEeCC---CCcee
Q 039432 321 SAVVNLIKQEWNFKEEPIMVVLDS---QGMVT 349 (598)
Q Consensus 321 ~~~~r~ike~~~~~~iP~LVvL~p---qGkv~ 349 (598)
..+.+.|++++.|++++++. +|+++
T Consensus 66 ----~~~~~~~~i~~~Pt~~~~~~~~~~G~~~ 93 (118)
T 2f51_A 66 ----GNAADAYGVSSIPALFFVKKEGNEIKTL 93 (118)
T ss_dssp ----HHHHHHTTCCSSSEEEEEEEETTEEEEE
T ss_pred ----HHHHHhcCCCCCCEEEEEeCCCCcceEE
Confidence 12567889999999999987 47765
No 146
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=96.90 E-value=0.0014 Score=59.41 Aligned_cols=68 Identities=19% Similarity=0.169 Sum_probs=50.2
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
++|.|++.|.+.|| +|..+.+. |.+++++.. +.+.++-|-+ |+.
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~-l~~l~~~~~-----~~~~~~~vd~-------d~~---------------------- 66 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDI-LSKTSSDLS-----KMAAIYLVDV-------DQT---------------------- 66 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHH-HHHHHTTTT-----TTEEEEEEET-------TTC----------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHH-HHHHHHHcc-----CceEEEEEEC-------CcC----------------------
Confidence 38999999999998 45566666 899988862 2366665554 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
..+.+.|++++.|+++ +..+|+.+
T Consensus 67 -----~~l~~~~~v~~~Pt~~-~~~~G~~v 90 (149)
T 3gix_A 67 -----AVYTQYFDISYIPSTV-FFFNGQHM 90 (149)
T ss_dssp -----CHHHHHTTCCSSSEEE-EEETTEEE
T ss_pred -----HHHHHHcCCCccCeEE-EEECCeEE
Confidence 1255778999999999 77899988
No 147
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=96.89 E-value=0.0013 Score=54.45 Aligned_cols=68 Identities=15% Similarity=0.245 Sum_probs=49.9
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
++|.|+++|.+.||+ |....+. |.++.++.. +++.++.|.+ |+..
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~-~~~~~~~~~-----~~v~~~~vd~-------~~~~--------------------- 66 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPV-LEELRLNYE-----ESFGFYYVDV-------EEEK--------------------- 66 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHH-HHHHHHHTT-----TTSEEEEEET-------TTCH---------------------
T ss_pred cCCEEEEEEeCCCChhHHHHHHH-HHHHHHHcC-----CceEEEEEEC-------CcCh---------------------
Confidence 479999999999984 4455555 788877752 3577777776 2111
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
.+.+.|++++.|+++++ .+|+.+
T Consensus 67 ------~l~~~~~v~~~Pt~~~~-~~g~~~ 89 (111)
T 3gnj_A 67 ------TLFQRFSLKGVPQILYF-KDGEYK 89 (111)
T ss_dssp ------HHHHHTTCCSSCEEEEE-ETTEEE
T ss_pred ------hHHHhcCCCcCCEEEEE-ECCEEE
Confidence 35677899999999999 688876
No 148
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=96.89 E-value=0.00038 Score=59.88 Aligned_cols=79 Identities=15% Similarity=0.206 Sum_probs=49.7
Q ss_pred eeecceecCcEEEEEEecCCCCChhh-hhHHH---HHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCC
Q 039432 234 QLGVSELKDKVVILLVSKPELLPLEK-LFLLV---HQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLP 309 (598)
Q Consensus 234 kV~Is~L~gK~VlLyfSal~~~~~~~-~~~~L---~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MP 309 (598)
.+..+..+||.|+|+|.+.||++|.. .+. + ..+-+.. +.++ +++.+|. |.
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~-~~~~~~~~~~~-----~~~~--~~~~vd~-----~~------------- 72 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKV-VFKDSLVADYF-----NRHF--VNLKMDM-----EK------------- 72 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHH-GGGCHHHHHHH-----HHHS--EEEEECS-----SS-------------
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHH-hcCcHHHHHHH-----hcCe--EEEEEec-----CC-------------
Confidence 34555578999999999999855543 333 3 2222221 1223 4445421 11
Q ss_pred eeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 310 WYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 310 WyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.. ...+.+.|++++.|+++++|++|+++.
T Consensus 73 ------~~------~~~~~~~~~v~~~Pt~~~~d~~G~~~~ 101 (130)
T 2kuc_A 73 ------GE------GVELRKKYGVHAYPTLLFINSSGEVVY 101 (130)
T ss_dssp ------TT------HHHHHHHTTCCSSCEEEEECTTSCEEE
T ss_pred ------cc------hHHHHHHcCCCCCCEEEEECCCCcEEE
Confidence 01 234567789999999999999999874
No 149
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.82 E-value=0.0017 Score=56.96 Aligned_cols=71 Identities=7% Similarity=-0.099 Sum_probs=48.2
Q ss_pred ecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCc
Q 039432 240 LKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQL 318 (598)
Q Consensus 240 L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~ 318 (598)
=++|.|+++|.+.|| +|..+.+. |.+++++.. +.++.++.|-+ |+..
T Consensus 24 ~~~~~vlv~f~a~wC~~C~~~~p~-~~~l~~~~~----~~~v~~~~vd~-------~~~~-------------------- 71 (137)
T 2dj0_A 24 DKRVTWIVEFFANWSNDCQSFAPI-YADLSLKYN----CTGLNFGKVDV-------GRYT-------------------- 71 (137)
T ss_dssp STTSCEEEEECCTTCSTTTTTHHH-HHHHHHHHC----SSSCEEEECCT-------TTCH--------------------
T ss_pred CCCCEEEEEEECCCCHHHHHHHHH-HHHHHHHhC----CCCeEEEEEeC-------ccCH--------------------
Confidence 345689999999998 56666666 888887763 12455554443 2211
Q ss_pred ccHHHHHHHHHhhccC------CccEEEEeCCCCceec
Q 039432 319 LNSAVVNLIKQEWNFK------EEPIMVVLDSQGMVTN 350 (598)
Q Consensus 319 i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|+++ +.|+++++ .+|+++.
T Consensus 72 -------~~~~~~~v~~~~~~~~~Pt~~~~-~~G~~~~ 101 (137)
T 2dj0_A 72 -------DVSTRYKVSTSPLTKQLPTLILF-QGGKEAM 101 (137)
T ss_dssp -------HHHHHTTCCCCSSSSCSSEEEEE-SSSSEEE
T ss_pred -------HHHHHccCcccCCcCCCCEEEEE-ECCEEEE
Confidence 134556776 99999999 6899875
No 150
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=96.81 E-value=0.0015 Score=54.34 Aligned_cols=68 Identities=10% Similarity=0.031 Sum_probs=49.0
Q ss_pred CcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCccc
Q 039432 242 DKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLN 320 (598)
Q Consensus 242 gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~ 320 (598)
||.|+++|.+.||+ |....+. |.++.++.. +++.++.|.. |.+
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~-l~~~~~~~~-----~~~~~~~vd~-------~~~----------------------- 67 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPL-FETLSNDYA-----GKVIFLKVDV-------DAV----------------------- 67 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHH-HHHHHHHTT-----TTSEEEEEET-------TTT-----------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHH-HHHHHHHcC-----CCeEEEEEEC-------Cch-----------------------
Confidence 89999999999984 4555566 888877752 2566666665 211
Q ss_pred HHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 321 SAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 321 ~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 68 ----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 92 (112)
T 1ep7_A 68 ----AAVAEAAGITAMPTFHVY-KDGVKAD 92 (112)
T ss_dssp ----HHHHHHHTCCBSSEEEEE-ETTEEEE
T ss_pred ----HHHHHHcCCCcccEEEEE-ECCeEEE
Confidence 235567899999998877 7999864
No 151
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.81 E-value=0.0019 Score=54.37 Aligned_cols=68 Identities=12% Similarity=0.046 Sum_probs=49.0
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.|+++|.+.||+ |..+.+. |.+++++.. ++.++.|.+ |+..
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~-l~~l~~~~~------~v~~~~vd~-------~~~~--------------------- 69 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPF-YEECSKTYT------KMVFIKVDV-------DEVS--------------------- 69 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHH-HHHHHHHCT------TSEEEEEET-------TTTH---------------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHH-HHHHHHHcC------CCEEEEEEC-------CCCH---------------------
Confidence 689999999999984 5555566 888887741 366666665 2111
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|+++++ .+|+++.
T Consensus 70 ------~~~~~~~v~~~Pt~~~~-~~G~~~~ 93 (112)
T 1syr_A 70 ------EVTEKENITSMPTFKVY-KNGSSVD 93 (112)
T ss_dssp ------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ------HHHHHcCCCcccEEEEE-ECCcEEE
Confidence 35567899999998877 5898864
No 152
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=96.81 E-value=0.0014 Score=54.66 Aligned_cols=71 Identities=8% Similarity=0.047 Sum_probs=48.8
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
++|.|+++|.+.|| +|..+.+. +.++++++.. .+.++ +++.+|. + + .+
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~-~~~~~~~~~~--~~~~v--~~~~vd~-----~--~----------------~~--- 71 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPE-YAKAAGKLKA--EGSEI--RLAKVDA-----T--E----------------ES--- 71 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHH-HHHHHHTTTT--TCCCC--BCEEEET-----T--T----------------CC---
T ss_pred cCCeEEEEEECCCCHHHHHhhHH-HHHHHHHHhc--cCCcE--EEEEEcC-----C--C----------------CH---
Confidence 68999999999998 45566666 8899888731 22344 4555511 1 1 01
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
.+.+.+++++.|+++++ ++|+.+
T Consensus 72 ------~~~~~~~v~~~Pt~~~~-~~g~~~ 94 (120)
T 1mek_A 72 ------DLAQQYGVRGYPTIKFF-RNGDTA 94 (120)
T ss_dssp ------SSHHHHTCCSSSEEEEE-ESSCSS
T ss_pred ------HHHHHCCCCcccEEEEE-eCCCcC
Confidence 23466799999999999 688765
No 153
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=96.81 E-value=0.0013 Score=54.05 Aligned_cols=70 Identities=16% Similarity=0.058 Sum_probs=49.0
Q ss_pred eecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCC
Q 039432 239 ELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQ 317 (598)
Q Consensus 239 ~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~ 317 (598)
..+||.|+++|.+.||+ |....+. |.++.++.. ++.++.|.. |+.
T Consensus 17 ~~~~~~~~v~f~~~~C~~C~~~~~~-~~~~~~~~~------~~~~~~vd~-------~~~-------------------- 62 (105)
T 3m9j_A 17 AAGDKLVVVDFSATWCGPCKMIKPF-FHSLSEKYS------NVIFLEVDV-------DDC-------------------- 62 (105)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHH-HHHHHHHST------TSEEEEEET-------TTC--------------------
T ss_pred hcCCCeEEEEEECCCChhhHHHHHH-HHHHHHHcc------CeEEEEEEh-------hhh--------------------
Confidence 34689999999999984 5555555 788777652 255555554 211
Q ss_pred cccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 318 LLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 318 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+.+.+.|++++.|+++++ .+|+.+.
T Consensus 63 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 87 (105)
T 3m9j_A 63 -------QDVASESEVKSMPTFQFF-KKGQKVG 87 (105)
T ss_dssp -------HHHHHHTTCCBSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcCcEEEEE-ECCeEEE
Confidence 125667899999999999 7788763
No 154
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=96.78 E-value=0.002 Score=52.65 Aligned_cols=69 Identities=10% Similarity=0.044 Sum_probs=49.4
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.++++|.+.||+ |....+. |.++.++.. +++.++.|.+ |++
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~-~~~~~~~~~-----~~~~~~~v~~-------~~~---------------------- 61 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPV-IDELAKEYS-----GKIAVYKLNT-------DEA---------------------- 61 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHH-HHHHHHHTT-----TTCEEEEEET-------TTC----------------------
T ss_pred CCCcEEEEEECCCChHHHHHHHH-HHHHHHHhc-----CceEEEEEcC-------cch----------------------
Confidence 478999999999984 5555566 888887752 2466666665 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 62 -----~~~~~~~~v~~~Pt~~~~-~~g~~~~ 86 (105)
T 1fb6_A 62 -----PGIATQYNIRSIPTVLFF-KNGERKE 86 (105)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHhCCCCcccEEEEE-eCCeEEE
Confidence 135577899999998888 6898764
No 155
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=96.78 E-value=0.00012 Score=67.38 Aligned_cols=99 Identities=14% Similarity=0.118 Sum_probs=58.4
Q ss_pred eecceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeee
Q 039432 235 LGVSELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSV 313 (598)
Q Consensus 235 V~Is~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAV 313 (598)
+.....+||.|+|+|.+.|| +|..+.+. |.++.+.. +.+.+++.|.+ |.+++.
T Consensus 39 ~~~~~~~~k~vlv~F~a~WC~~C~~~~p~-l~~~~~~~-----~~~~~~~~v~~-------d~~~~~------------- 92 (164)
T 1sen_A 39 KKEAAASGLPLMVIIHKSWCGACKALKPK-FAESTEIS-----ELSHNFVMVNL-------EDEEEP------------- 92 (164)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHH-HHTCHHHH-----HHHTTSEEEEE-------EGGGSC-------------
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHHHHHH-HHHHHHHh-----hcCCeEEEEEe-------cCCchH-------------
Confidence 33445689999999999998 45555555 66643322 12355677776 322220
Q ss_pred ecCCcccHHHHHHHHHhhcc--CCccEEEEeCCCCceechhHHHHHHHhCcCccCCCchhHHhhh
Q 039432 314 RQPQLLNSAVVNLIKQEWNF--KEEPIMVVLDSQGMVTNSNALDMVLIWGARGYPFSVTREIELW 376 (598)
Q Consensus 314 p~~~~i~~~~~r~ike~~~~--~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AfPFT~~r~e~L~ 376 (598)
+.+.|++ ++.|+++++|++|+++.. ++-..|...|.|.....++|.
T Consensus 93 -------------~~~~~~~~~~~~Pt~~~~d~~G~~~~~----~~G~~~~~~~~~~~~~~~~l~ 140 (164)
T 1sen_A 93 -------------KDEDFSPDGGYIPRILFLDPSGKVHPE----IINENGNPSYKYFYVSAEQVV 140 (164)
T ss_dssp -------------SCGGGCTTCSCSSEEEEECTTSCBCTT----CCCTTSCTTSTTCCCSHHHHH
T ss_pred -------------HHHHhcccCCcCCeEEEECCCCCEEEE----EeCCCCccchhcccCCHHHHH
Confidence 1123455 569999999999999854 112233444444444444444
No 156
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.77 E-value=0.0011 Score=57.58 Aligned_cols=71 Identities=11% Similarity=0.134 Sum_probs=49.1
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
++|.|+++|.+.|| +|..+.+. |.++++++.. .+.+ |.++.+|. |++
T Consensus 33 ~~~~vlv~f~a~wC~~C~~~~p~-~~~~~~~~~~--~~~~--v~~~~vd~-----~~~---------------------- 80 (140)
T 2dj1_A 33 DKDTVLLEFYAPWCGHCKQFAPE-YEKIASTLKD--NDPP--IAVAKIDA-----TSA---------------------- 80 (140)
T ss_dssp TCSEEEEEECCTTCHHHHTTHHH-HHHHHHHHHS--SSSC--CEEEEECT-----TTC----------------------
T ss_pred cCCeEEEEEECCCCHHHHHhhHH-HHHHHHHHhc--cCCc--eEEEEEeC-----ccc----------------------
Confidence 47999999999998 45566666 8888887731 2223 45555521 110
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
..+.+.|++++.|+++++ .+|++.
T Consensus 81 -----~~~~~~~~v~~~Pt~~~~-~~G~~~ 104 (140)
T 2dj1_A 81 -----SMLASKFDVSGYPTIKIL-KKGQAV 104 (140)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred -----HHHHHHCCCCccCeEEEE-ECCcEE
Confidence 235677899999999999 788854
No 157
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=96.76 E-value=0.0025 Score=54.96 Aligned_cols=73 Identities=11% Similarity=-0.005 Sum_probs=49.3
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.|+++|.+.|| +|....+. +.++.+++.....++++.++-|-. |+.
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~-~~~la~~~~~~~~~~~v~~~~vd~-------~~~---------------------- 81 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRL-WDDLSMSQSQKRNHLTFVAARIDG-------EKY---------------------- 81 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHH-HHHHHHHHHTSTTTTTEEEEEEET-------TTC----------------------
T ss_pred CCCCEEEEEECCccHHHHHHhHH-HHHHHHHHHhcccCCCeEEEEEEc-------ccc----------------------
Confidence 38999999999998 45565666 788776653222334444444433 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCce
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMV 348 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv 348 (598)
+.+.+.|++++.|+++++.+.|++
T Consensus 82 -----~~l~~~~~v~~~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 82 -----PDVIERMRVSGFPTMRYYTRIDKQ 105 (127)
T ss_dssp -----HHHHHHTTCCSSSEEEEECSSCSS
T ss_pred -----HhHHHhcCCccCCEEEEEeCCCCC
Confidence 235677899999999999887764
No 158
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.74 E-value=0.002 Score=54.53 Aligned_cols=70 Identities=14% Similarity=0.103 Sum_probs=47.8
Q ss_pred ceecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecC
Q 039432 238 SELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQP 316 (598)
Q Consensus 238 s~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~ 316 (598)
+..+||.|+++|.+.||+ |....+. |.+++++. ++.++-|.. |+.
T Consensus 29 ~~~~~~~~vv~f~a~wC~~C~~~~~~-~~~~~~~~-------~~~~~~vd~-------~~~------------------- 74 (117)
T 2xc2_A 29 EQHKNKLVVVDFFATWCGPCKTIAPL-FKELSEKY-------DAIFVKVDV-------DKL------------------- 74 (117)
T ss_dssp HHTTTSCEEEEEECTTCHHHHHHHHH-HHHHHTTS-------SSEEEEEET-------TTS-------------------
T ss_pred HhCCCCEEEEEEECCCCHhHHHHhHH-HHHHHHHc-------CcEEEEEEC-------Ccc-------------------
Confidence 345789999999999984 4455555 77777653 344444443 211
Q ss_pred CcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 317 QLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 317 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 75 --------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 99 (117)
T 2xc2_A 75 --------EETARKYNISAMPTFIAI-KNGEKVG 99 (117)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHHcCCCccceEEEE-eCCcEEE
Confidence 135567899999998887 7898764
No 159
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=96.73 E-value=0.00098 Score=59.91 Aligned_cols=69 Identities=9% Similarity=-0.005 Sum_probs=51.0
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.||.|+++|.+.|| +|..+.+. |.+++++.. +++.++.|-+ |+..
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~-l~~l~~~~~-----~~v~~~~vd~-------d~~~--------------------- 67 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEV-LYSIAEKVK-----NFAVIYLVDI-------TEVP--------------------- 67 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHH-HHHHHHHHT-----TTEEEEEEET-------TTCC---------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHH-HHHHHHHhC-----CCeEEEEEcc-------ccCH---------------------
Confidence 48999999999998 45566666 888888762 3477777766 2111
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|+++++. +|+.+.
T Consensus 68 ------~~~~~~~i~~~Pt~~~~~-~G~~v~ 91 (142)
T 1qgv_A 68 ------DFNKMYELYDPCTVMFFF-RNKHIM 91 (142)
T ss_dssp ------TTTTSSCSCSSCEEEEEE-TTEEEE
T ss_pred ------HHHHHcCCCCCCEEEEEE-CCcEEE
Confidence 145678999999999994 788875
No 160
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=96.72 E-value=0.002 Score=55.41 Aligned_cols=69 Identities=14% Similarity=0.159 Sum_probs=47.1
Q ss_pred ecCcEEEEEEecCCCCCh-hhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCc
Q 039432 240 LKDKVVILLVSKPELLPL-EKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQL 318 (598)
Q Consensus 240 L~gK~VlLyfSal~~~~~-~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~ 318 (598)
-.+|.|++.|.|.||++| ...+. +.++.++. .+ ++|+-+| .++.
T Consensus 18 ~~~k~vvv~F~a~wC~~C~~~~p~-~~~~~~~~------~~--~~~~~vd-------~d~~------------------- 62 (105)
T 3zzx_A 18 AGNKLVVIDFYATWCGPCKMIAPK-LEELSQSM------SD--VVFLKVD-------VDEC------------------- 62 (105)
T ss_dssp TTTSEEEEEEECTTCHHHHHHHHH-HHHHHHHC------TT--EEEEEEE-------TTTC-------------------
T ss_pred cCCCEEEEEEECCCCCCccCCCcc-hhhhhhcc------CC--eEEEEEe-------cccC-------------------
Confidence 357999999999998444 44444 66666553 12 5677762 2210
Q ss_pred ccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 319 LNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 319 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..|.+.|++++.|+++++ .+|+.+.
T Consensus 63 ------~~l~~~~~V~~~PT~~~~-~~G~~v~ 87 (105)
T 3zzx_A 63 ------EDIAQDNQIACMPTFLFM-KNGQKLD 87 (105)
T ss_dssp ------HHHHHHTTCCBSSEEEEE-ETTEEEE
T ss_pred ------HHHHHHcCCCeecEEEEE-ECCEEEE
Confidence 125678899999999888 6898874
No 161
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.71 E-value=0.0021 Score=54.57 Aligned_cols=68 Identities=12% Similarity=0.090 Sum_probs=48.8
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
++|.|+++|.+.||+ |....+. |.+++++.. ++.++.|.+ |++
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~-l~~~~~~~~------~~~~~~vd~-------~~~---------------------- 76 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPV-FADLAKKFP------NAVFLKVDV-------DEL---------------------- 76 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHH-HHHHHHHCT------TSEEEEEET-------TTC----------------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHH-HHHHHHHCC------CcEEEEEEC-------CCC----------------------
Confidence 589999999999984 5555565 888877652 266666665 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 77 -----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 101 (122)
T 2vlu_A 77 -----KPIAEQFSVEAMPTFLFM-KEGDVKD 101 (122)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHHcCCCcccEEEEE-eCCEEEE
Confidence 135567899999998877 7998863
No 162
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=96.69 E-value=0.0014 Score=57.24 Aligned_cols=70 Identities=13% Similarity=0.216 Sum_probs=44.7
Q ss_pred cCcEEEEEEecCCCC--------------ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 241 KDKVVILLVSKPELL--------------PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 241 ~gK~VlLyfSal~~~--------------~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
+||.|+++|.+.||+ +|..+.+.+.+++++. ++++.++-|.+ |++
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~-----~~~~~~~~vd~-------d~~--------- 78 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEY-----QGKLTVAKLNI-------DQN--------- 78 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC------------CEEEEEET-------TSC---------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHh-----cCCeEEEEEEC-------CCC---------
Confidence 489999999999976 5544333254444443 23466666655 211
Q ss_pred CCCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 307 SLPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 307 ~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+ .+.+.|++++.|+++++ ++|+++.
T Consensus 79 ---------~---------~l~~~~~v~~~Pt~~~~-~~G~~~~ 103 (123)
T 1oaz_A 79 ---------P---------GTAPKYGIRGIPTLLLF-KNGEVAA 103 (123)
T ss_dssp ---------T---------TTGGGGTCCBSSEEEEE-ESSSEEE
T ss_pred ---------H---------HHHHHcCCCccCEEEEE-ECCEEEE
Confidence 1 25578899999999999 9999864
No 163
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.69 E-value=0.0021 Score=55.31 Aligned_cols=70 Identities=21% Similarity=0.210 Sum_probs=50.0
Q ss_pred cCcEEEEEEecCCCCCh-hhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELLPL-EKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~~~-~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.|+++|.+.||+.| ...+. |.++.++.. +.++.++.|.+ |..
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~-l~~l~~~~~----~~~v~~~~vd~-------d~~---------------------- 77 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPV-FEKISDTPA----GDKVGFYKVDV-------DEQ---------------------- 77 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHH-HHHHHTSTH----HHHSEEEEEET-------TTC----------------------
T ss_pred CCCEEEEEEECCCCHhHHHHHHH-HHHHHHHCc----CCcEEEEEEEC-------cCC----------------------
Confidence 58999999999998555 44555 888887762 11467777765 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 78 -----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 102 (121)
T 2j23_A 78 -----SQIAQEVGIRAMPTFVFF-KNGQKID 102 (121)
T ss_dssp -----HHHHHHHTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHHcCCCcccEEEEE-ECCeEEe
Confidence 125567899999999988 5898864
No 164
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=96.68 E-value=0.002 Score=56.37 Aligned_cols=68 Identities=10% Similarity=-0.006 Sum_probs=49.3
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
++|.|+++|.+.||+ |....+. |.+++++. .++.++.|.+ |++
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~-l~~l~~~~------~~v~~~~vd~-------d~~---------------------- 79 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERP-MEKIAYEF------PTVKFAKVDA-------DNN---------------------- 79 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHH-HHHHHHHC------TTSEEEEEET-------TTC----------------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHH-HHHHHHHC------CCCEEEEEEC-------CCC----------------------
Confidence 579999999999984 5555566 78877764 2466666665 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 80 -----~~l~~~~~v~~~Pt~~i~-~~G~~~~ 104 (125)
T 1r26_A 80 -----SEIVSKCRVLQLPTFIIA-RSGKMLG 104 (125)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHHcCCCcccEEEEE-eCCeEEE
Confidence 125667899999998887 8998764
No 165
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=96.68 E-value=0.0013 Score=55.86 Aligned_cols=69 Identities=7% Similarity=-0.177 Sum_probs=49.8
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.|+++|.+.||+ |....+. |.++++++. +++.++-|.+ |+..
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~-~~~~~~~~~-----~~~~~~~vd~-------~~~~--------------------- 65 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPE-FELLARMIK-----GKVRAGKVDC-------QAYP--------------------- 65 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHH-HHHHHHHHT-----TTCEEEEEET-------TTCH---------------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHH-HHHHHHHhc-----CCeEEEEEeC-------cCCH---------------------
Confidence 478999999999984 5555666 888887763 2466666665 2111
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
.+.+.|++++.|++++++++|++.
T Consensus 66 ------~~~~~~~v~~~Pt~~~~~~~~~~~ 89 (122)
T 3aps_A 66 ------QTCQKAGIKAYPSVKLYQYERAKK 89 (122)
T ss_dssp ------HHHHHTTCCSSSEEEEEEEEGGGT
T ss_pred ------HHHHHcCCCccceEEEEeCCCccc
Confidence 255678999999999999887643
No 166
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.66 E-value=0.0023 Score=56.32 Aligned_cols=76 Identities=18% Similarity=0.153 Sum_probs=52.9
Q ss_pred ecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCc
Q 039432 240 LKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQL 318 (598)
Q Consensus 240 L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~ 318 (598)
+++ .|+++|.+.|| +|..+.+. |.+++++. + +.++.|.++. +.+..
T Consensus 30 ~~~-~vlv~F~a~wC~~C~~~~p~-l~~l~~~~-----~--v~~~~vd~~~-----~~~~~------------------- 76 (135)
T 3emx_A 30 LQG-DAILAVYSKTCPHCHRDWPQ-LIQASKEV-----D--VPIVMFIWGS-----LIGER------------------- 76 (135)
T ss_dssp HTS-SEEEEEEETTCHHHHHHHHH-HHHHHTTC-----C--SCEEEEEECT-----TCCHH-------------------
T ss_pred hCC-cEEEEEECCcCHhhhHhChh-HHHHHHHC-----C--CEEEEEECCC-----chhhh-------------------
Confidence 344 89999999998 45566666 88888875 1 7777777621 11111
Q ss_pred ccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 319 LNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 319 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
....-+.+.+.|++++.|++++++ +|+++.
T Consensus 77 -~~d~~~~l~~~~~v~~~Pt~~~~~-~G~~v~ 106 (135)
T 3emx_A 77 -ELSAARLEMNKAGVEGTPTLVFYK-EGRIVD 106 (135)
T ss_dssp -HHHHHHHHHHHHTCCSSSEEEEEE-TTEEEE
T ss_pred -hhhhhHHHHHHcCCceeCeEEEEc-CCEEEE
Confidence 112335567889999999999999 898764
No 167
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.65 E-value=0.0012 Score=57.04 Aligned_cols=70 Identities=9% Similarity=0.006 Sum_probs=47.3
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
++|.|+++|.+.||+ |..+.+. |.++++++. ...++ +++.+|. |+. +
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~-~~~~~~~~~---~~~~~--~~~~vd~-----~~~------------------~--- 71 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPI-YTSLGKKYK---GQKDL--VIAKMDA-----TAN------------------D--- 71 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHH-HHHHHHHHT---TSSSE--EEEEECT-----TTS------------------C---
T ss_pred CCCcEEEEEECCCChhHHHHHHH-HHHHHHHhc---CCCCE--EEEEecC-----CcC------------------H---
Confidence 489999999999985 4455566 888888863 12344 5555521 111 1
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCce
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMV 348 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv 348 (598)
.+.+.|++++.|+++++++.|++
T Consensus 72 ------~~~~~~~v~~~Pt~~~~~~g~~~ 94 (133)
T 2dj3_A 72 ------ITNDQYKVEGFPTIYFAPSGDKK 94 (133)
T ss_dssp ------CCCSSCCCSSSSEEEEECTTCTT
T ss_pred ------HHHhhcCCCcCCEEEEEeCCCcc
Confidence 12346799999999999987754
No 168
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=96.63 E-value=0.0029 Score=53.29 Aligned_cols=69 Identities=7% Similarity=0.060 Sum_probs=49.8
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.++++|.+.||+ |....+. |.++.++.. +++.++.|.+ |+.
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~-~~~~~~~~~-----~~~~~~~v~~-------~~~---------------------- 73 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPV-LEEIATERA-----TDLTVAKLDV-------DTN---------------------- 73 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHH-HHHHHHHTT-----TTCEEEEEET-------TTC----------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHH-HHHHHHHhc-----CCeEEEEEEC-------CCC----------------------
Confidence 478999999999984 5555555 777777652 3477777776 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 74 -----~~~~~~~~i~~~Pt~~~~-~~g~~~~ 98 (121)
T 2i1u_A 74 -----PETARNFQVVSIPTLILF-KDGQPVK 98 (121)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHhcCCCcCCEEEEE-ECCEEEE
Confidence 125567899999999988 5898864
No 169
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=96.60 E-value=0.0027 Score=56.21 Aligned_cols=70 Identities=11% Similarity=0.130 Sum_probs=51.0
Q ss_pred ecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCc
Q 039432 240 LKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQL 318 (598)
Q Consensus 240 L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~ 318 (598)
-++|.|+++|.+.|| +|..+.+. |.+++++.. +++.++-|.+ |++.
T Consensus 53 ~~~k~vlv~F~a~wC~~C~~~~p~-l~~~~~~~~-----~~~~~~~vd~-------~~~~-------------------- 99 (148)
T 3p2a_A 53 QDDLPMVIDFWAPWCGPCRSFAPI-FAETAAERA-----GKVRFVKVNT-------EAEP-------------------- 99 (148)
T ss_dssp TCSSCEEEEEECSSCHHHHHHHHH-HHHHHHHTT-----TTCEEEEEET-------TTCH--------------------
T ss_pred hcCCcEEEEEECCCCHHHHHHHHH-HHHHHHHcC-----CceEEEEEEC-------cCCH--------------------
Confidence 468999999999998 45566666 888888763 3466666554 2111
Q ss_pred ccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 319 LNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 319 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|+++++ .+|+.+.
T Consensus 100 -------~l~~~~~v~~~Pt~~~~-~~G~~~~ 123 (148)
T 3p2a_A 100 -------ALSTRFRIRSIPTIMLY-RNGKMID 123 (148)
T ss_dssp -------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHCCCCccCEEEEE-ECCeEEE
Confidence 35677899999999999 5898764
No 170
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.59 E-value=0.0033 Score=52.18 Aligned_cols=68 Identities=13% Similarity=0.206 Sum_probs=47.7
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.|+++|.+.||+ |....+. |.++.++.. ++.++.|.+ |+.
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~-l~~~~~~~~------~v~~~~v~~-------~~~---------------------- 68 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPI-FAELAKKFP------NVTFLKVDV-------DEL---------------------- 68 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHH-HHHHHHHCS------SEEEEEEET-------TTC----------------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHH-HHHHHHhCC------CcEEEEEEc-------ccc----------------------
Confidence 589999999999984 4455555 777776641 455555554 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 69 -----~~~~~~~~v~~~Pt~~~~-~~G~~~~ 93 (113)
T 1ti3_A 69 -----KAVAEEWNVEAMPTFIFL-KDGKLVD 93 (113)
T ss_dssp -----HHHHHHHHCSSTTEEEEE-ETTEEEE
T ss_pred -----HHHHHhCCCCcccEEEEE-eCCEEEE
Confidence 124566799999999998 6898864
No 171
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=96.58 E-value=0.0021 Score=58.38 Aligned_cols=69 Identities=6% Similarity=0.021 Sum_probs=51.1
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.|+++|.+.|| +|..+.+. |.++++++. +++.++-|.+ |++
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~-l~~la~~~~-----~~v~~~~vd~-------~~~---------------------- 107 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQ-FQAAAATLA-----GQVRLAKIDT-------QAH---------------------- 107 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHH-HHHHHHHHT-----TTCEEEEEET-------TTS----------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHH-HHHHHHHcc-----CCEEEEEEeC-------Ccc----------------------
Confidence 58999999999998 45566666 888888763 2466666665 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|+++++|+++++ .+|+++.
T Consensus 108 -----~~l~~~~~i~~~Pt~~~~-~~G~~~~ 132 (155)
T 2ppt_A 108 -----PAVAGRHRIQGIPAFILF-HKGRELA 132 (155)
T ss_dssp -----THHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHHcCCCcCCEEEEE-eCCeEEE
Confidence 135678899999999999 7999864
No 172
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=96.58 E-value=0.0024 Score=55.30 Aligned_cols=78 Identities=10% Similarity=0.190 Sum_probs=52.5
Q ss_pred cCcEEEEEEecC-------CCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeee
Q 039432 241 KDKVVILLVSKP-------ELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYS 312 (598)
Q Consensus 241 ~gK~VlLyfSal-------~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyA 312 (598)
+||.|+++|.+. ||+ |....+. |.++++++. +++.++.|.+ +... . |.
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~-l~~~~~~~~-----~~~~~~~vd~-------~~~~-~---------~~- 78 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPV-VREGLKHIS-----EGCVFIYCQV-------GEKP-Y---------WK- 78 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHH-HHHHGGGCC-----TTEEEEEEEC-------CCHH-H---------HH-
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHH-HHHHHHHcC-----CCcEEEEEEC-------CCch-h---------hh-
Confidence 489999999999 984 5566666 889888762 3577777776 2111 1 11
Q ss_pred eecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 313 VRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 313 Vp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
.. .. .+.+.|+++++|+++++++.+++...
T Consensus 79 ---d~--~~----~~~~~~~i~~~Pt~~~~~~~~~~~g~ 108 (123)
T 1wou_A 79 ---DP--NN----DFRKNLKVTAVPTLLKYGTPQKLVES 108 (123)
T ss_dssp ---CT--TC----HHHHHHCCCSSSEEEETTSSCEEEGG
T ss_pred ---ch--hH----HHHHHCCCCeeCEEEEEcCCceEecc
Confidence 11 11 24556899999999999986555543
No 173
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=96.54 E-value=0.0022 Score=56.66 Aligned_cols=68 Identities=10% Similarity=0.068 Sum_probs=49.5
Q ss_pred CcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCccc
Q 039432 242 DKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLN 320 (598)
Q Consensus 242 gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~ 320 (598)
+|.|+++|.+.||+ |..+.+. |.++.++.. +++.++.|-+ |+..
T Consensus 24 ~~~vlv~F~a~wC~~C~~~~~~-l~~l~~~~~-----~~v~~~~vd~-------~~~~---------------------- 68 (140)
T 3hz4_A 24 KKPVVVMFYSPACPYCKAMEPY-FEEYAKEYG-----SSAVFGRINI-------ATNP---------------------- 68 (140)
T ss_dssp SSCEEEEEECTTCHHHHHHHHH-HHHHHHHHT-----TTSEEEEEET-------TTCH----------------------
T ss_pred CCcEEEEEECCCChhHHHHHHH-HHHHHHHhC-----CceEEEEEEC-------CcCH----------------------
Confidence 89999999999984 5555566 888887763 2466666665 2111
Q ss_pred HHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 321 SAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 321 ~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|+++++ .+|+.+.
T Consensus 69 -----~l~~~~~v~~~Pt~~~~-~~G~~~~ 92 (140)
T 3hz4_A 69 -----WTAEKYGVQGTPTFKFF-CHGRPVW 92 (140)
T ss_dssp -----HHHHHHTCCEESEEEEE-ETTEEEE
T ss_pred -----hHHHHCCCCcCCEEEEE-eCCcEEE
Confidence 25567899999999999 7898763
No 174
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=96.48 E-value=0.0031 Score=53.77 Aligned_cols=71 Identities=13% Similarity=0.023 Sum_probs=47.8
Q ss_pred eecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCC
Q 039432 239 ELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQ 317 (598)
Q Consensus 239 ~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~ 317 (598)
..+||.|+++|.+.||+ |....+. |.+++++.. ++.++.|.. |.+
T Consensus 34 ~~~~~~~vv~f~a~wC~~C~~~~~~-l~~~~~~~~------~~~~~~vd~-------~~~-------------------- 79 (124)
T 1faa_A 34 AAGDKPVVLDMFTQWCGPCKAMAPK-YEKLAEEYL------DVIFLKLDC-------NQE-------------------- 79 (124)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHH-HHHHHHHCT------TSEEEEEEC-------SST--------------------
T ss_pred hcCCCEEEEEEECCcCHhHHHHhHH-HHHHHHHCC------CCEEEEEec-------Ccc--------------------
Confidence 34789999999999984 5555566 888877752 244444443 100
Q ss_pred cccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 318 LLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 318 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
-+.+.+.|++++.|++++. ++|+++.
T Consensus 80 ------~~~~~~~~~v~~~Pt~~~~-~~G~~~~ 105 (124)
T 1faa_A 80 ------NKTLAKELGIRVVPTFKIL-KENSVVG 105 (124)
T ss_dssp ------THHHHHHHCCSSSSEEEEE-ETTEEEE
T ss_pred ------hHHHHHHcCCCeeeEEEEE-eCCcEEE
Confidence 1235567899999996655 7898763
No 175
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=96.47 E-value=0.0037 Score=60.33 Aligned_cols=71 Identities=4% Similarity=-0.101 Sum_probs=52.5
Q ss_pred CcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCccc
Q 039432 242 DKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLN 320 (598)
Q Consensus 242 gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~ 320 (598)
+|.|+++|.+.|| +|..+.+. +.++++++.. .+..+.++.|.+ |.++
T Consensus 30 ~~~vlv~F~a~wC~~C~~~~p~-~~~l~~~~~~--~~~~v~~~~vd~-------~~~~---------------------- 77 (244)
T 3q6o_A 30 RSAWAVEFFASWCGHCIAFAPT-WXALAEDVKA--WRPALYLAALDC-------AEET---------------------- 77 (244)
T ss_dssp SSEEEEEEECTTCHHHHHHHHH-HHHHHHHTGG--GTTTEEEEEEET-------TSTT----------------------
T ss_pred CCeEEEEEECCcCHHHHHHHHH-HHHHHHHHHh--ccCcEEEEEEeC-------Cchh----------------------
Confidence 5999999999998 56666677 8999988741 234688888876 2111
Q ss_pred HHHHHHHHHhhccCCccEEEEeCCCCc
Q 039432 321 SAVVNLIKQEWNFKEEPIMVVLDSQGM 347 (598)
Q Consensus 321 ~~~~r~ike~~~~~~iP~LVvL~pqGk 347 (598)
-+.+.+.|++++.|+++++++.++
T Consensus 78 ---~~~l~~~~~v~~~Pt~~~~~~g~~ 101 (244)
T 3q6o_A 78 ---NSAVCRDFNIPGFPTVRFFXAFTX 101 (244)
T ss_dssp ---THHHHHHTTCCSSSEEEEECTTCC
T ss_pred ---hHHHHHHcCCCccCEEEEEeCCCc
Confidence 134567889999999999997433
No 176
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=96.46 E-value=0.0038 Score=52.23 Aligned_cols=68 Identities=12% Similarity=0.063 Sum_probs=48.0
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.|+++|.+.||+ |....+. |.++.++.. ++.++-|.+ |+.
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~-l~~~~~~~~------~~~~~~v~~-------~~~---------------------- 70 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPV-FAEYAKKFP------GAIFLKVDV-------DEL---------------------- 70 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHH-HHHHHHHCT------TSEEEEEET-------TTS----------------------
T ss_pred CCCEEEEEEECCCCHhHHHHhHH-HHHHHHHCC------CcEEEEEEc-------ccC----------------------
Confidence 589999999999984 4455555 777777641 355555554 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 71 -----~~~~~~~~v~~~Pt~~~~-~~g~~~~ 95 (118)
T 2vm1_A 71 -----KDVAEAYNVEAMPTFLFI-KDGEKVD 95 (118)
T ss_dssp -----HHHHHHTTCCSBSEEEEE-ETTEEEE
T ss_pred -----HHHHHHcCCCcCcEEEEE-eCCeEEE
Confidence 235567899999999988 7898764
No 177
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=96.43 E-value=0.0092 Score=61.39 Aligned_cols=100 Identities=14% Similarity=0.108 Sum_probs=65.1
Q ss_pred ccCCceeecceecCcEEEEEEecC-CC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 229 AMKSEQLGVSELKDKVVILLVSKP-EL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 229 ~~~~~kV~Is~L~gK~VlLyfSal-~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
..+|..|++++++||.|.|+|=-. ++ .|..++.. +.+ . ..++++||-||.|. ....+.|-+-.
T Consensus 11 ~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~-~~~----~----~~~~~~v~gis~D~-----~~~~~~f~~~~- 75 (322)
T 4eo3_A 11 TDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVE-FSR----E----NFEKAQVVGISRDS-----VEALKRFKEKN- 75 (322)
T ss_dssp ETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHH-HHH----S----CCTTEEEEEEESCC-----HHHHHHHHHHH-
T ss_pred CCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHH-HHH----H----hhCCCEEEEEeCCC-----HHHHHHHHHhh-
Confidence 457779999999999999999422 22 25555554 432 1 23469999999842 44566776643
Q ss_pred CCCeeeeecCCcccHHHHHHHHHhhccC----CccEEEEeCCCCceec
Q 039432 307 SLPWYSVRQPQLLNSAVVNLIKQEWNFK----EEPIMVVLDSQGMVTN 350 (598)
Q Consensus 307 ~MPWyAVp~~~~i~~~~~r~ike~~~~~----~iP~LVvL~pqGkv~~ 350 (598)
.+| ||=+.|.. ..+.+.|++- .+|+..|+|++|++..
T Consensus 76 ~l~-----fp~l~D~~--~~v~~~ygv~~~~~~~r~tfiId~~G~i~~ 116 (322)
T 4eo3_A 76 DLK-----VTLLSDPE--GILHEFFNVLENGKTVRSTFLIDRWGFVRK 116 (322)
T ss_dssp TCC-----SEEEECTT--CHHHHHTTCEETTEECCEEEEECTTSBEEE
T ss_pred CCc-----eEEEEcCc--hHHHHhcCCCCCCcCccEEEEECCCCEEEE
Confidence 344 33222322 3455667773 4788999999999963
No 178
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=96.36 E-value=0.0054 Score=49.96 Aligned_cols=69 Identities=10% Similarity=0.052 Sum_probs=48.8
Q ss_pred ecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCc
Q 039432 240 LKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQL 318 (598)
Q Consensus 240 L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~ 318 (598)
.+||.|+++|.+.||+ |....+. |.++.++. .++.++.|.+ |+.
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~-l~~~~~~~------~~~~~~~v~~-------~~~--------------------- 61 (104)
T 2vim_A 17 NKGRLIVVDFFAQWCGPCRNIAPK-VEALAKEI------PEVEFAKVDV-------DQN--------------------- 61 (104)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHH-HHHHHHHC------TTSEEEEEET-------TTC---------------------
T ss_pred cCCCeEEEEEECCCCHHHHHhhHH-HHHHHHHC------CCCEEEEEec-------cCC---------------------
Confidence 3689999999999984 4455555 77777664 1466666665 211
Q ss_pred ccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 319 LNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 319 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.+++++.|++++++ +|+.+.
T Consensus 62 ------~~~~~~~~v~~~Pt~~~~~-~g~~~~ 86 (104)
T 2vim_A 62 ------EEAAAKYSVTAMPTFVFIK-DGKEVD 86 (104)
T ss_dssp ------HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred ------HHHHHHcCCccccEEEEEe-CCcEEE
Confidence 1355678999999988885 898764
No 179
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=96.34 E-value=0.0049 Score=58.20 Aligned_cols=69 Identities=9% Similarity=0.026 Sum_probs=50.9
Q ss_pred ecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCc
Q 039432 240 LKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQL 318 (598)
Q Consensus 240 L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~ 318 (598)
.+||.|+++|.+.|| +|....+. +.++++++. +++.++.|-+ |...
T Consensus 112 ~~~~~vlv~F~a~wC~~C~~~~p~-~~~l~~~~~-----~~v~~~~vd~-------~~~~-------------------- 158 (210)
T 3apq_A 112 NSGELWFVNFYSPGCSHCHDLAPT-WREFAKEVD-----GLLRIGAVNC-------GDDR-------------------- 158 (210)
T ss_dssp HHSCCEEEEEECTTCHHHHHHHHH-HHHHHHHTB-----TTBEEEEEET-------TTCH--------------------
T ss_pred ccCCcEEEEEeCCCChhHHHHHHH-HHHHHHHhc-----CceEEEEEEC-------CccH--------------------
Confidence 579999999999998 45566666 888888763 2466666655 2111
Q ss_pred ccHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 319 LNSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 319 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
.+.+.|++++.|+++++ ++|+++
T Consensus 159 -------~l~~~~~v~~~Pt~~~~-~~G~~~ 181 (210)
T 3apq_A 159 -------MLCRMKGVNSYPSLFIF-RSGMAA 181 (210)
T ss_dssp -------HHHHHTTCCSSSEEEEE-CTTSCC
T ss_pred -------HHHHHcCCCcCCeEEEE-ECCCce
Confidence 25567899999999999 899874
No 180
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=96.31 E-value=0.00076 Score=62.45 Aligned_cols=44 Identities=14% Similarity=0.085 Sum_probs=32.7
Q ss_pred hhccCCccEEEEeCCCCceechhHHHHHHHhCcCccCCCchhHHhhhc
Q 039432 330 EWNFKEEPIMVVLDSQGMVTNSNALDMVLIWGARGYPFSVTREIELWQ 377 (598)
Q Consensus 330 ~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AfPFT~~r~e~L~~ 377 (598)
.++++++|++++++|+|+++.. ++-..+.+-|+++.+..+++-+
T Consensus 95 ~~~v~~~PT~~f~~~~G~~v~~----~~G~~~~~~~~~~~~~~~~ll~ 138 (151)
T 3ph9_A 95 SPDGQYVPRIMFVDPSLTVRAD----IAGRYSNRLYTYEPRDLPLLIE 138 (151)
T ss_dssp CTTCCCSSEEEEECTTSCBCTT----CCCSCTTSTTCCCGGGHHHHHH
T ss_pred hcCCCCCCEEEEECCCCCEEEE----EeCCcCCcccccchhhHHHHHH
Confidence 4577999999999999999872 2234455778888877666543
No 181
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=96.31 E-value=0.0067 Score=53.16 Aligned_cols=69 Identities=12% Similarity=0.096 Sum_probs=48.9
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+++.|+|+|.+.||+ |..+.+. |.++.++.. +++.++.|.+ |.+
T Consensus 49 ~~~~vvv~f~~~~C~~C~~~~~~-l~~l~~~~~-----~~v~~~~vd~-------~~~---------------------- 93 (140)
T 1v98_A 49 GAPLTLVDFFAPWCGPCRLVSPI-LEELARDHA-----GRLKVVKVNV-------DEH---------------------- 93 (140)
T ss_dssp CCCEEEEEEECTTCHHHHHHHHH-HHHHHHHTT-----TTEEEEEEET-------TTC----------------------
T ss_pred cCCCEEEEEECCCCHHHHHHHHH-HHHHHHHcc-----CceEEEEEEC-------CCC----------------------
Confidence 344499999999974 5555566 888887752 2477777665 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 94 -----~~l~~~~~v~~~Pt~~~~-~~G~~~~ 118 (140)
T 1v98_A 94 -----PGLAARYGVRSVPTLVLF-RRGAPVA 118 (140)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----HHHHHHCCCCccCEEEEE-eCCcEEE
Confidence 125677899999999999 7999864
No 182
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.30 E-value=0.0033 Score=55.67 Aligned_cols=65 Identities=12% Similarity=0.085 Sum_probs=45.1
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.|+++|.+.||+ |....+. |.++.++. . .+.|+-+|. | +. +
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~-l~~la~~~------~--~v~~~~vd~-----~--~~----------------~--- 73 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQH-LSVLARKF------P--ETKFVKAIV-----N--SC----------------I--- 73 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHH-HHHHHHHC------S--SEEEEEECC-----S--SS----------------C---
T ss_pred CCCEEEEEEECCCChHHHHHHHH-HHHHHHHC------C--CcEEEEEEh-----h--cC----------------c---
Confidence 358999999999984 4455555 77776653 1 256666621 1 10 0
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+.|++++.|+++++. +|+++.
T Consensus 74 ---------~~~~i~~~Pt~~~~~-~G~~v~ 94 (135)
T 2dbc_A 74 ---------EHYHDNCLPTIFVYK-NGQIEG 94 (135)
T ss_dssp ---------SSCCSSCCSEEEEES-SSSCSE
T ss_pred ---------ccCCCCCCCEEEEEE-CCEEEE
Confidence 367999999999997 898864
No 183
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=96.22 E-value=0.0044 Score=52.30 Aligned_cols=70 Identities=9% Similarity=-0.036 Sum_probs=47.5
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
++|.|+++|.+.||+ |..+.+. |.++++++.......++.++-|-. |+. +
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~-~~~~~~~~~~~~~~~~v~~~~vd~-------~~~------------------~--- 74 (121)
T 2djj_A 24 DTKDVLIEFYAPWCGHCKALAPK-YEELGALYAKSEFKDRVVIAKVDA-------TAN------------------D--- 74 (121)
T ss_dssp TTSCEEEEEECSSCTTHHHHHHH-HHHHHHHHTTSSCTTSSEEEEEET-------TTS------------------C---
T ss_pred CCCCEEEEEECCCCHhHHHhhHH-HHHHHHHHhhcccCCceEEEEEEC-------ccc------------------c---
Confidence 689999999999984 5555566 888888873211123566655554 210 0
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCce
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMV 348 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv 348 (598)
+.+ ++++.|+++++++.|++
T Consensus 75 -------~~~--~v~~~Pt~~~~~~~~~~ 94 (121)
T 2djj_A 75 -------VPD--EIQGFPTIKLYPAGAKG 94 (121)
T ss_dssp -------CSS--CCSSSSEEEEECSSCTT
T ss_pred -------ccc--ccCcCCeEEEEeCcCCC
Confidence 112 88999999999998883
No 184
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=96.21 E-value=0.0063 Score=57.71 Aligned_cols=81 Identities=7% Similarity=0.011 Sum_probs=48.6
Q ss_pred cceecCcEEEEEEecCCCCChhhhhH------HHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCe
Q 039432 237 VSELKDKVVILLVSKPELLPLEKLFL------LVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPW 310 (598)
Q Consensus 237 Is~L~gK~VlLyfSal~~~~~~~~~~------~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPW 310 (598)
...-+||.|+|.|.+.||++|..+-. .+.+.+++ .+|+|.+|+ |+..+- .
T Consensus 34 ~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~----------~fv~ikVD~-----de~~~l-~-------- 89 (173)
T 3ira_A 34 KARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE----------AFVSIKVDR-----EERPDI-D-------- 89 (173)
T ss_dssp HHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH----------HCEEEEEET-----TTCHHH-H--------
T ss_pred HHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh----------cCceeeeCC-----cccCcH-H--------
Confidence 34457999999999999855544222 12222222 247777743 211111 0
Q ss_pred eeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 311 YSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 311 yAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
.....++...+++.++|++|+++|+|+++..
T Consensus 90 ----------~~y~~~~q~~~gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 90 ----------NIYMTVCQIILGRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp ----------HHHHHHHHHHHSCCCSSEEEEECTTSCEEEE
T ss_pred ----------HHHHHHHHHHcCCCCCcceeeECCCCCceee
Confidence 1111233344799999999999999999863
No 185
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=96.09 E-value=0.005 Score=58.89 Aligned_cols=69 Identities=12% Similarity=0.140 Sum_probs=50.3
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
++|.|+|+|.+.|| +|....+. |.+++++.. +++.++.|.+ |.. +
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~-l~~l~~~~~-----~~v~~~~vd~-------d~~------------------~--- 74 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPI-LDEIADEYQ-----GKLTVAKLNI-------DQN------------------P--- 74 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHH-HHHHHHHTT-----TTCEEEEEET-------TTC------------------T---
T ss_pred cCCEEEEEEECCcCHHHHHHHHH-HHHHHHHhc-----CCcEEEEEEC-------CCC------------------H---
Confidence 48999999999998 45566666 888888863 2377777765 211 1
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|+++++. +|+++.
T Consensus 75 ------~l~~~~~v~~~Pt~~~~~-~G~~~~ 98 (222)
T 3dxb_A 75 ------GTAPKYGIRGIPTLLLFK-NGEVAA 98 (222)
T ss_dssp ------TTGGGGTCCSBSEEEEEE-TTEEEE
T ss_pred ------HHHHHcCCCcCCEEEEEE-CCeEEE
Confidence 134678999999999995 788763
No 186
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=95.86 E-value=0.0096 Score=56.17 Aligned_cols=72 Identities=7% Similarity=0.063 Sum_probs=50.8
Q ss_pred cCcEEEEEEecCCCCCh-hhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELLPL-EKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~~~-~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.|+++|.+.||++| .+.+. +.++.+++. ....++.++.|-. |++.
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~-~~~~a~~~~--~~~~~v~~~~vd~-------~~~~--------------------- 194 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPE-YEKAAKELS--KRSPPIPLAKVDA-------TAET--------------------- 194 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHH-HHHHHHHHH--TSSSCCCEEEEET-------TTCH---------------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHH-HHHHHHHHh--ccCCcEEEEEEEC-------CCCH---------------------
Confidence 56899999999998544 55566 888888773 1234566676665 2111
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.|++++.|+++++. +|+.+.
T Consensus 195 ------~l~~~~~v~~~Pt~~~~~-~g~~~~ 218 (241)
T 3idv_A 195 ------DLAKRFDVSGYPTLKIFR-KGRPYD 218 (241)
T ss_dssp ------HHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred ------HHHHHcCCcccCEEEEEE-CCeEEE
Confidence 267788999999999997 477654
No 187
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=95.82 E-value=0.0099 Score=46.82 Aligned_cols=63 Identities=19% Similarity=0.264 Sum_probs=45.6
Q ss_pred cEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcccH
Q 039432 243 KVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLNS 321 (598)
Q Consensus 243 K~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~~ 321 (598)
+.++++|++.|| +|....+. |.++.++.. ++++++.|.+ |++ +
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~-l~~~~~~~~-----~~~~~~~vd~-------~~~------------------~----- 46 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRV-VEEVANEMP-----DAVEVEYINV-------MEN------------------P----- 46 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHH-HHHHHHHCS-----SSEEEEEEES-------SSS------------------C-----
T ss_pred ceEEEEEeCCCCCchHHHHHH-HHHHHHHcC-----CceEEEEEEC-------CCC------------------H-----
Confidence 467899999997 45566666 888887752 4688888876 211 1
Q ss_pred HHHHHHHHhhccCCccEEEEeCCCCce
Q 039432 322 AVVNLIKQEWNFKEEPIMVVLDSQGMV 348 (598)
Q Consensus 322 ~~~r~ike~~~~~~iP~LVvL~pqGkv 348 (598)
.+.+.|++++.|++++ +|++
T Consensus 47 ----~~~~~~~v~~~Pt~~~---~G~~ 66 (85)
T 1fo5_A 47 ----QKAMEYGIMAVPTIVI---NGDV 66 (85)
T ss_dssp ----CTTTSTTTCCSSEEEE---TTEE
T ss_pred ----HHHHHCCCcccCEEEE---CCEE
Confidence 1346679999999999 8886
No 188
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=95.79 E-value=0.032 Score=56.54 Aligned_cols=151 Identities=13% Similarity=0.115 Sum_probs=80.3
Q ss_pred CcEEEEEEecCCCCCh-hhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCccc
Q 039432 242 DKVVILLVSKPELLPL-EKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLN 320 (598)
Q Consensus 242 gK~VlLyfSal~~~~~-~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~ 320 (598)
.|.++++|.+.||+.+ ...+. |.++.++++ +. |.|+-+ |.++..
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~-~~~~A~~~~-----~~--i~f~~v-------d~~~~~-------------------- 179 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSN-FKTAAESFK-----GK--ILFIFI-------DSDHTD-------------------- 179 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHH-HHHHHGGGT-----TT--CEEEEE-------CTTSGG--------------------
T ss_pred CCcEEEEEEeCCchhHHHHHHH-HHHHHHHcc-----Cc--eEEEEe-------cCChHH--------------------
Confidence 3578899999997444 44555 888888874 22 566666 222111
Q ss_pred HHHHHHHHHhhccCC--ccEEEEeCCCCceechhHHHHHHHhCcCccCCCchhHHhhhccc----------------ccc
Q 039432 321 SAVVNLIKQEWNFKE--EPIMVVLDSQGMVTNSNALDMVLIWGARGYPFSVTREIELWQEE----------------DWT 382 (598)
Q Consensus 321 ~~~~r~ike~~~~~~--iP~LVvL~pqGkv~~~nA~~mI~~wG~~AfPFT~~r~e~L~~~e----------------~w~ 382 (598)
-+.+.+.|++++ .|++++++..+... .|..++-++|.+.+.+.-++- .|.
T Consensus 180 ---~~~~~~~fgi~~~~~P~~~~~~~~~~~~---------ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~ 247 (361)
T 3uem_A 180 ---NQRILEFFGLKKEECPAVRLITLEEEMT---------KYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWD 247 (361)
T ss_dssp ---GHHHHHHTTCCTTTCSEEEEEECC--CC---------EECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTT
T ss_pred ---HHHHHHHcCCCccCCccEEEEEcCCccc---------ccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccc
Confidence 123446679987 99999998743211 111112233333333222110 121
Q ss_pred cccccccCC-ccccccc-ccCcEEEEEcCCCh-hHHHHHHHHHHHH-HhcC--ceeeEEEeccC
Q 039432 383 LPLMIDEIH-PLLNKWV-QEGRNICLYGSENK-DWIIEFNAKMMEI-RRLG--LQVDMVFVGVK 440 (598)
Q Consensus 383 lelLvd~id-~~I~~~i-~egK~I~LYgg~d~-~Wir~FT~~l~~i-~~~~--~~~E~v~Vgkd 440 (598)
-+.+. .++ ......+ ..+|.++++|.+.+ ..|+++.+.+.++ +.-. ..+-++.|-.+
T Consensus 248 ~~~v~-~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~ 310 (361)
T 3uem_A 248 KQPVK-VLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDST 310 (361)
T ss_dssp TSSSE-EECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETT
T ss_pred cCCcE-EeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECC
Confidence 01111 000 0111112 47999999999942 4569999999999 6522 23555555433
No 189
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=95.76 E-value=0.014 Score=54.93 Aligned_cols=73 Identities=14% Similarity=0.024 Sum_probs=48.8
Q ss_pred ecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCc
Q 039432 240 LKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQL 318 (598)
Q Consensus 240 L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~ 318 (598)
..++.++++|.+.||+ |..+.+. |.+++++... +.++++.++.|.+ |+.
T Consensus 132 ~~~~~~~v~F~a~wC~~C~~~~p~-~~~l~~~~~~-~~~~~v~~~~vd~-------~~~--------------------- 181 (226)
T 1a8l_A 132 IDQDVRILVFVTPTCPYCPLAVRM-AHKFAIENTK-AGKGKILGDMVEA-------IEY--------------------- 181 (226)
T ss_dssp CCSCEEEEEEECSSCTTHHHHHHH-HHHHHHHHHH-TTCCCEEEEEEEG-------GGC---------------------
T ss_pred cCCCcEEEEEeCCCCCccHHHHHH-HHHHHHhccc-ccCCcEEEEEEEc-------ccC---------------------
Confidence 3466669999999984 5555666 8888877621 1224566666655 211
Q ss_pred ccHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 319 LNSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 319 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
..+.+.|++++.|+++++ ++|+.+
T Consensus 182 ------~~l~~~~~v~~~Pt~~~~-~~G~~~ 205 (226)
T 1a8l_A 182 ------PEWADQYNVMAVPKIVIQ-VNGEDR 205 (226)
T ss_dssp ------HHHHHHTTCCSSCEEEEE-ETTEEE
T ss_pred ------HHHHHhCCCcccCeEEEE-eCCcee
Confidence 124567899999998887 588765
No 190
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=95.72 E-value=0.025 Score=63.62 Aligned_cols=145 Identities=12% Similarity=0.086 Sum_probs=81.4
Q ss_pred ceecCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecC
Q 039432 238 SELKDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQP 316 (598)
Q Consensus 238 s~L~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~ 316 (598)
+.++||.|++.|.+.|| +|..+.+. |.+++++++ +++.++.|.. |+..
T Consensus 451 ~~~~~~~vlv~F~a~wC~~c~~~~p~-~~~~a~~~~-----~~v~~~~vd~-------~~~~------------------ 499 (780)
T 3apo_A 451 PASDKEPWLVDFFAPWSPPSRALLPE-LRKASTLLY-----GQLKVGTLDC-------TIHE------------------ 499 (780)
T ss_dssp CTTCCSCEEEEEECTTCHHHHHHHHH-HHHHHHHTT-----TTCEEEEEET-------TTCH------------------
T ss_pred HHcCCCeEEEEEECCCCHHHHHHhHH-HHHHHHHhc-----CCeEEEEEeC-------CCCH------------------
Confidence 34489999999999998 55566677 888888863 3466666654 2111
Q ss_pred CcccHHHHHHHHHhhccCCccEEEEeCCCCceechhHHHHHHHhCcCccCCCchhHHhhhccccc-ccccccccCCcccc
Q 039432 317 QLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNSNALDMVLIWGARGYPFSVTREIELWQEEDW-TLPLMIDEIHPLLN 395 (598)
Q Consensus 317 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AfPFT~~r~e~L~~~e~w-~lelLvd~id~~I~ 395 (598)
.+.+.|++++.|++++++ +|++.... | +++.+.+.+.-++-.- ....|.+ ....
T Consensus 500 ---------~~~~~~~v~~~Pt~~~~~-~g~~~~~~--------g----~~~~~~l~~fi~~~~~~~v~~l~~---~~f~ 554 (780)
T 3apo_A 500 ---------GLCNMYNIQAYPTTVVFN-QSSIHEYE--------G----HHSAEQILEFIEDLRNPSVVSLTP---STFN 554 (780)
T ss_dssp ---------HHHHHTTCCSSSEEEEEE-TTEEEEEC--------S----CSCHHHHHHHHHHHHSCSEEECCH---HHHH
T ss_pred ---------HHHHHcCCCcCCeEEEEc-CCceeeec--------C----cccHHHHHHHHHhhcccceeecCc---ccHH
Confidence 156778999999999994 47653211 2 1233333222111000 0011110 0111
Q ss_pred cccc---cCcEEEEEcCCChhH---HHHHHHHHHHH-HhcCceeeEEEeccC
Q 039432 396 KWVQ---EGRNICLYGSENKDW---IIEFNAKMMEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 396 ~~i~---egK~I~LYgg~d~~W---ir~FT~~l~~i-~~~~~~~E~v~Vgkd 440 (598)
+.+. .++.++++|.+ .| |+++.+.+.++ +.-+..+-++.|..+
T Consensus 555 ~~v~~~~~~~~~lv~F~a--p~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~ 604 (780)
T 3apo_A 555 ELVKQRKHDEVWMVDFYS--PWSHPSQVLMPEWKRMARTLTGLINVGSVDCG 604 (780)
T ss_dssp HHTTTCCTTCCEEEEEEC--TTCHHHHHHHHHHHHHHHHHTTTSEEEEEETT
T ss_pred HHhhccCCCCeEEEEEEC--CCCHHHHHhhHHHHHHHHHhhCCeEEEEEECc
Confidence 1122 25666777777 56 68888888888 652223444444433
No 191
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=95.53 E-value=0.012 Score=46.33 Aligned_cols=61 Identities=15% Similarity=0.197 Sum_probs=44.0
Q ss_pred EEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcccHHH
Q 039432 245 VILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLNSAV 323 (598)
Q Consensus 245 VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~~~~ 323 (598)
+.++|++.|| +|....+. |.++.++.. ++++++.|.+ |++.
T Consensus 4 ~vv~f~~~~C~~C~~~~~~-l~~~~~~~~-----~~~~~~~vd~-------~~~~------------------------- 45 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEV-VDEAKKEFG-----DKIDVEKIDI-------MVDR------------------------- 45 (85)
T ss_dssp CEEEESCSSSCCSTTHHHH-HHHHHHHHC-----SSCCEEEECT-------TTCG-------------------------
T ss_pred EEEEEECCCCcchHHHHHH-HHHHHHHhc-----CCeEEEEEEC-------CCCH-------------------------
Confidence 5788999997 45566666 888877752 3577888776 2111
Q ss_pred HHHHHHhhccCCccEEEEeCCCCce
Q 039432 324 VNLIKQEWNFKEEPIMVVLDSQGMV 348 (598)
Q Consensus 324 ~r~ike~~~~~~iP~LVvL~pqGkv 348 (598)
.+.+.+++++.|++++ +|++
T Consensus 46 --~~~~~~~v~~~Pt~~~---~G~~ 65 (85)
T 1nho_A 46 --EKAIEYGLMAVPAIAI---NGVV 65 (85)
T ss_dssp --GGGGGTCSSCSSEEEE---TTTE
T ss_pred --HHHHhCCceeeCEEEE---CCEE
Confidence 2446789999999999 8886
No 192
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=95.51 E-value=0.0031 Score=53.82 Aligned_cols=68 Identities=13% Similarity=0.091 Sum_probs=47.3
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.|+++|.+.|| +|....+. |.+++++.. ++.++.|.+ |+.
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~-l~~~~~~~~------~v~~~~v~~-------~~~---------------------- 78 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPV-FAEYAKKFP------GAVFLKVDV-------DEL---------------------- 78 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHH-HHHHHHHCT------TBCCEECCT-------TTS----------------------
T ss_pred cCCEEEEEEECCCChhHHHHHHH-HHHHHHHCC------CCEEEEEec-------cch----------------------
Confidence 58999999999998 45566666 888877751 344444433 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|++++.|+++++ ++|+++.
T Consensus 79 -----~~~~~~~~v~~~Pt~~~~-~~g~~~~ 103 (130)
T 1wmj_A 79 -----KEVAEKYNVEAMPTFLFI-KDGAEAD 103 (130)
T ss_dssp -----GGGHHHHTCCSSCCCCBC-TTTTCCB
T ss_pred -----HHHHHHcCCCccceEEEE-eCCeEEE
Confidence 124567799999998887 8998764
No 193
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=94.45 E-value=0.0025 Score=51.78 Aligned_cols=69 Identities=16% Similarity=0.174 Sum_probs=45.1
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.|+++|.+.||+ |....+. |.++.++.. +++.++.|.+ |++
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~-~~~~~~~~~-----~~~~~~~v~~-------~~~---------------------- 62 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPI-IEELAKEYE-----GKVKVVKVNV-------DEN---------------------- 62 (106)
Confidence 478999999999974 4455555 666666542 2344444433 211
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.+++++.|+++++ ++|+++.
T Consensus 63 -----~~~~~~~~v~~~Pt~~~~-~~g~~~~ 87 (106)
T 2yj7_A 63 -----PNTAAQYGIRSIPTLLLF-KNGQVVD 87 (106)
Confidence 123456788999999999 8898753
No 194
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=95.33 E-value=0.02 Score=62.78 Aligned_cols=71 Identities=7% Similarity=0.025 Sum_probs=53.3
Q ss_pred CcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCccc
Q 039432 242 DKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLN 320 (598)
Q Consensus 242 gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~ 320 (598)
||.|+++|.+.|| +|..+.+. +.++++++.. .+..+.++-|-+ |.++
T Consensus 30 ~k~vlV~FyA~WC~pCk~~~P~-l~~la~~~~~--~~~~v~~~~VD~-------d~d~---------------------- 77 (519)
T 3t58_A 30 SSAWAVEFFASWCGHAIAFAPT-WKELANDVKD--WRPALNLAVLDC-------AEET---------------------- 77 (519)
T ss_dssp SSEEEEEEECTTSHHHHHHHHH-HHHHHHHHGG--GTTTEEEEEEET-------TSGG----------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHH-HHHHHHHhhC--cCCcEEEEEEEC-------Cccc----------------------
Confidence 5999999999998 56677777 8999998741 234677777776 2211
Q ss_pred HHHHHHHHHhhccCCccEEEEeCC---CCc
Q 039432 321 SAVVNLIKQEWNFKEEPIMVVLDS---QGM 347 (598)
Q Consensus 321 ~~~~r~ike~~~~~~iP~LVvL~p---qGk 347 (598)
-+.+.+.|++++.|+++++++ +|+
T Consensus 78 ---~~~l~~~~~V~~~PTl~~f~~g~~~G~ 104 (519)
T 3t58_A 78 ---NSAVCREFNIAGFPTVRFFQAFTKNGS 104 (519)
T ss_dssp ---GHHHHHHTTCCSBSEEEEECTTCCSCC
T ss_pred ---cHHHHHHcCCcccCEEEEEcCcccCCC
Confidence 124567889999999999997 665
No 195
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=95.28 E-value=0.026 Score=51.14 Aligned_cols=67 Identities=10% Similarity=0.205 Sum_probs=41.3
Q ss_pred CcEEEEEEecCC--C-CChhhhhHHHHHHhcCcCCCCCCCCeE--EEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecC
Q 039432 242 DKVVILLVSKPE--L-LPLEKLFLLVHQTYDHPHNKNLEESYK--IVWVPISSSETWTDVEERNFELFSCSLPWYSVRQP 316 (598)
Q Consensus 242 gK~VlLyfSal~--~-~~~~~~~~~L~~iY~~l~~~~~~~~fE--IVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~ 316 (598)
.+.++++|++.| | +|....+. |.+++++. +++. ++-|-+ |+.
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~-l~~la~~~------~~v~~~~~~Vd~-------d~~------------------- 80 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVM-IAELLREF------PQFDWQVAVADL-------EQS------------------- 80 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHH-HHHHHHTC------TTSCCEEEEECH-------HHH-------------------
T ss_pred CCCEEEEEECCCCCCccHHHHHHH-HHHHHHHh------cccceeEEEEEC-------CCC-------------------
Confidence 456888999887 6 34455566 88888774 2344 444443 321
Q ss_pred CcccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 317 QLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 317 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..+.+.|+++++|+++++ .+|+++.
T Consensus 81 --------~~la~~~~V~~iPT~~~f-k~G~~v~ 105 (142)
T 2es7_A 81 --------EAIGDRFNVRRFPATLVF-TDGKLRG 105 (142)
T ss_dssp --------HHHHHTTTCCSSSEEEEE-SCC----
T ss_pred --------HHHHHhcCCCcCCeEEEE-eCCEEEE
Confidence 125678899999999999 8998763
No 196
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=95.11 E-value=0.098 Score=49.03 Aligned_cols=152 Identities=8% Similarity=0.004 Sum_probs=75.9
Q ss_pred eecCcEEEEEEecC-CCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCC
Q 039432 239 ELKDKVVILLVSKP-ELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQ 317 (598)
Q Consensus 239 ~L~gK~VlLyfSal-~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~ 317 (598)
.++++.++++|++. ||++|..+...|.++-+. .++..++.|-. | +.
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~------~~~v~~~~vd~-------~--~~------------------ 65 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL------TDKLSYEIVDF-------D--TP------------------ 65 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT------CTTEEEEEEET-------T--SH------------------
T ss_pred hcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh------CCceEEEEEeC-------C--Cc------------------
Confidence 46678889999999 986665443324444321 23455555554 2 11
Q ss_pred cccHHHHHHHHHhhccCCccEEEEeCCCCceechhHHHHHHHhCcCccCCCchhHHhhhcccccccccccccCCccccc-
Q 039432 318 LLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNSNALDMVLIWGARGYPFSVTREIELWQEEDWTLPLMIDEIHPLLNK- 396 (598)
Q Consensus 318 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AfPFT~~r~e~L~~~e~w~lelLvd~id~~I~~- 396 (598)
.-+.+.+.|++++.|+++++. +|+.... .-.|. | +.....++-..-. ....-...++....+
T Consensus 66 -----~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~------~~~G~---~-~~~~l~~~l~~~l-~~~~~~~~l~~~~~~~ 128 (226)
T 1a8l_A 66 -----EGKELAKRYRIDRAPATTITQ-DGKDFGV------RYFGL---P-AGHEFAAFLEDIV-DVSREETNLMDETKQA 128 (226)
T ss_dssp -----HHHHHHHHTTCCSSSEEEEEE-TTBCCSE------EEESC---C-CTTHHHHHHHHHH-HHHHTCCCCCHHHHHH
T ss_pred -----ccHHHHHHcCCCcCceEEEEc-CCceeeE------EEecc---C-cHHHHHHHHHHHH-hhcCCCCCCCHHHHHH
Confidence 012355678999999999993 4432100 00121 1 1111111100000 000000011211111
Q ss_pred ccc-cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcC----ceeeEEEeccC
Q 039432 397 WVQ-EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLG----LQVDMVFVGVK 440 (598)
Q Consensus 397 ~i~-egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~----~~~E~v~Vgkd 440 (598)
... .++.++++|.+. ...|+++.+.+.++ ++.+ ..+.++.|.-+
T Consensus 129 ~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~ 179 (226)
T 1a8l_A 129 IRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAI 179 (226)
T ss_dssp HTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGG
T ss_pred HHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcc
Confidence 112 455658888774 35569999999998 5422 35666666655
No 197
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=95.05 E-value=0.061 Score=49.82 Aligned_cols=25 Identities=20% Similarity=0.268 Sum_probs=20.9
Q ss_pred HHHHhhccCCccEEEEeCCC-Cceec
Q 039432 326 LIKQEWNFKEEPIMVVLDSQ-GMVTN 350 (598)
Q Consensus 326 ~ike~~~~~~iP~LVvL~pq-Gkv~~ 350 (598)
.+.+.|++.+.|+++++||+ |+.+.
T Consensus 92 ~l~~~y~v~~~P~~~fld~~~G~~l~ 117 (153)
T 2dlx_A 92 RYIQFYKLGDFPYVSILDPRTGQKLV 117 (153)
T ss_dssp HHHHHHTCCSSSEEEEECTTTCCCCE
T ss_pred HHHHHcCCCCCCEEEEEeCCCCcEee
Confidence 44578899999999999999 87764
No 198
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=94.61 E-value=0.033 Score=56.22 Aligned_cols=74 Identities=7% Similarity=0.044 Sum_probs=51.4
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.|+++|.+.|| +|..+.+. +.++++++. +.+.|+.|-+ |.++
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~-~~~la~~~~-----~~~~~~~v~~-------d~~~--------------------- 79 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSST-FRKAAKRLD-----GVVQVAAVNC-------DLNK--------------------- 79 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHH-HHHHHHHTT-----TTSEEEEEET-------TSTT---------------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHH-HHHHHHHcc-----CCcEEEEEEc-------cCcc---------------------
Confidence 36889999999998 45566666 888888863 3488899887 3111
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceechh
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNSN 352 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 352 (598)
-+.+.+.|++++.|+++++++.+.+....
T Consensus 80 ----~~~l~~~~~I~~~Pt~~~~~~g~~v~~~~ 108 (298)
T 3ed3_A 80 ----NKALCAKYDVNGFPTLMVFRPPKIDLSKP 108 (298)
T ss_dssp ----THHHHHHTTCCBSSEEEEEECCCC-----
T ss_pred ----CHHHHHhCCCCccceEEEEECCceeeccc
Confidence 13456778999999999998754433333
No 199
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=94.56 E-value=0.024 Score=59.84 Aligned_cols=68 Identities=7% Similarity=0.001 Sum_probs=47.5
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.||.|+++|.+.|| +|....+. |.+++++.. ...++.++.|-. + .. .
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~-~~~l~~~~~---~~~~v~~~~id~-------~--~~-------~------------ 416 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPK-YKELGEKLS---KDPNIVIAKMDA-------T--AN-------D------------ 416 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHH-HHHHHHHTT---TCSSEEEEEEET-------T--SS-------C------------
T ss_pred CCCcEEEEEecCcChhHHHhhHH-HHHHHHHhc---cCCCEEEEEEEC-------C--ch-------h------------
Confidence 38999999999998 55666677 889888873 122444444433 1 10 0
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCc
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGM 347 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGk 347 (598)
+.+.|++++.|+++++++.|+
T Consensus 417 -------~~~~~~v~~~Pt~~~~~~~~~ 437 (481)
T 3f8u_A 417 -------VPSPYEVRGFPTIYFSPANKK 437 (481)
T ss_dssp -------CCTTCCCCSSSEEEEECTTCT
T ss_pred -------hHhhCCCcccCEEEEEeCCCe
Confidence 224678999999999998887
No 200
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=94.10 E-value=0.18 Score=46.37 Aligned_cols=71 Identities=10% Similarity=0.106 Sum_probs=49.8
Q ss_pred cCc-EEEEEEecCCC--CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCC
Q 039432 241 KDK-VVILLVSKPEL--LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQ 317 (598)
Q Consensus 241 ~gK-~VlLyfSal~~--~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~ 317 (598)
.++ .|++.|.|.|| ++|..+.+.|.++=++. ++++.|+-|=+ |+.
T Consensus 31 ~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~-----~~~v~~~KVdv-------De~-------------------- 78 (137)
T 2qsi_A 31 HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAF-----PGRLVAAEVAA-------EAE-------------------- 78 (137)
T ss_dssp TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTS-----TTTEEEEEECG-------GGH--------------------
T ss_pred cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHc-----cCCcEEEEEEC-------CCC--------------------
Confidence 444 99999999997 66766655466666554 34577776655 322
Q ss_pred cccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 318 LLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 318 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
+.+.++|+++++|+|+++ .+|+++..
T Consensus 79 -------~~la~~ygV~siPTlilF-kdG~~v~~ 104 (137)
T 2qsi_A 79 -------RGLMARFGVAVCPSLAVV-QPERTLGV 104 (137)
T ss_dssp -------HHHHHHHTCCSSSEEEEE-ECCEEEEE
T ss_pred -------HHHHHHcCCccCCEEEEE-ECCEEEEE
Confidence 235677899999999999 47877643
No 201
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=93.80 E-value=0.041 Score=54.81 Aligned_cols=67 Identities=7% Similarity=0.074 Sum_probs=46.1
Q ss_pred cCcEEEEEEecCCCCChhh-hhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPELLPLEK-LFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~~~~~~-~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
+||.|+++|.+.||++|.. .+. |.+++.+.. + |.|+-+ |.++..
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~-l~~La~~~~------~--v~f~kV-------d~d~~~------------------- 176 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSS-LICLAAEYP------M--VKFCKI-------KASNTG------------------- 176 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHH-HHHHHHHCT------T--SEEEEE-------EHHHHC-------------------
T ss_pred CCCEEEEEEECCCChHHHHHHHH-HHHHHHHCC------C--CEEEEE-------eCCcHH-------------------
Confidence 4899999999999855544 455 777776641 2 556666 322210
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+.+.|++++.|+++++. +|+++.
T Consensus 177 -------l~~~~~I~~~PTll~~~-~G~~v~ 199 (245)
T 1a0r_P 177 -------AGDRFSSDVLPTLLVYK-GGELLS 199 (245)
T ss_dssp -------CTTSSCTTTCSEEEEEE-TTEEEE
T ss_pred -------HHHHCCCCCCCEEEEEE-CCEEEE
Confidence 22467999999999886 898874
No 202
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=93.72 E-value=0.047 Score=52.06 Aligned_cols=104 Identities=9% Similarity=0.032 Sum_probs=63.9
Q ss_pred ceeeccee-cCcEEEE-EEecCCC-CChh-hhhHHHHHHhcCcCCCCCCCCe-EEEEEEcCCCCCCChHhHHHHHHhhc-
Q 039432 233 EQLGVSEL-KDKVVIL-LVSKPEL-LPLE-KLFLLVHQTYDHPHNKNLEESY-KIVWVPISSSETWTDVEERNFELFSC- 306 (598)
Q Consensus 233 ~kV~Is~L-~gK~VlL-yfSal~~-~~~~-~~~~~L~~iY~~l~~~~~~~~f-EIVwIpid~~~~W~D~de~~Fe~~~~- 306 (598)
..|+++++ +||.|.| +|=+.|| +|.. +++. +.+.|++++ +.++ +|+=||.|. -...+.|-+-..
T Consensus 37 ~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~-f~~~~~ef~----~~g~d~VigIS~D~-----~~~~~~f~~~~~l 106 (176)
T 4f82_A 37 NACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPG-YVEHAEQLR----AAGIDEIWCVSVND-----AFVMGAWGRDLHT 106 (176)
T ss_dssp EEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHH-HHHHHHHHH----HTTCCEEEEEESSC-----HHHHHHHHHHTTC
T ss_pred eEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHH-HHHHHHHHH----hCCCCEEEEEeCCC-----HHHHHHHHHHhCC
Confidence 37899996 9996655 5557776 4566 8999 999999984 2357 999999832 334566655332
Q ss_pred C--CCeeeeecCCcccHHHHHHHHHh-----hc--cCCccEEEEeCCCCceechh
Q 039432 307 S--LPWYSVRQPQLLNSAVVNLIKQE-----WN--FKEEPIMVVLDSQGMVTNSN 352 (598)
Q Consensus 307 ~--MPWyAVp~~~~i~~~~~r~ike~-----~~--~~~iP~LVvL~pqGkv~~~n 352 (598)
. .|-++ -+ +.+..+.+.=. ++ ++..|...|+ ++|+|....
T Consensus 107 ~~~f~lLs--D~---~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~ 155 (176)
T 4f82_A 107 AGKVRMMA--DG---SAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLA 155 (176)
T ss_dssp TTTSEEEE--CT---TCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEE
T ss_pred CCCceEEE--cC---chHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEE
Confidence 1 23222 22 12333333211 11 1235778888 999997543
No 203
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=93.66 E-value=0.1 Score=50.52 Aligned_cols=89 Identities=8% Similarity=0.078 Sum_probs=53.2
Q ss_pred cCcEEEEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCccc
Q 039432 241 KDKVVILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLN 320 (598)
Q Consensus 241 ~gK~VlLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~ 320 (598)
+||.|+++|.+.||++|..+...|.++.++. .+ |.|+.+ |.+ . +
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~------~~--v~f~~v-------d~~-~----------------~---- 162 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEY------PM--VKFCKI-------RAS-N----------------T---- 162 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTC------TT--SEEEEE-------EHH-H----------------H----
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHC------CC--eEEEEE-------ECC-c----------------H----
Confidence 4699999999999855544433377777664 13 455555 222 1 0
Q ss_pred HHHHHHHHHhhccCCccEEEEeCCCCceechhHHHHHHHhCcCccCCCchhHHhh
Q 039432 321 SAVVNLIKQEWNFKEEPIMVVLDSQGMVTNSNALDMVLIWGARGYPFSVTREIEL 375 (598)
Q Consensus 321 ~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AfPFT~~r~e~L 375 (598)
.+.+.|++++.|+++++. +|+++.. -.+.....|. -|+.+.++.+
T Consensus 163 -----~l~~~~~i~~~PTl~~~~-~G~~v~~-~~G~~~~~g~---~~~~~~Le~~ 207 (217)
T 2trc_P 163 -----GAGDRFSSDVLPTLLVYK-GGELISN-FISVAEQFAE---DFFAADVESF 207 (217)
T ss_dssp -----TCSTTSCGGGCSEEEEEE-TTEEEEE-ETTGGGGSCS---SCCHHHHHHH
T ss_pred -----HHHHHCCCCCCCEEEEEE-CCEEEEE-EeCCcccCcc---cCCHHHHHHH
Confidence 123567899999999995 8988742 1122222232 3565655544
No 204
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=93.27 E-value=0.12 Score=48.75 Aligned_cols=65 Identities=6% Similarity=-0.015 Sum_probs=44.0
Q ss_pred ecCcEEEEEEecCCCCCh-hhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCc
Q 039432 240 LKDKVVILLVSKPELLPL-EKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQL 318 (598)
Q Consensus 240 L~gK~VlLyfSal~~~~~-~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~ 318 (598)
..++.++++|.+.||++| ...+. +.++.++. +++.++.|-+ |++
T Consensus 134 ~~~~~~~v~F~a~wC~~C~~~~~~-~~~~~~~~------~~v~~~~vd~-------~~~--------------------- 178 (229)
T 2ywm_A 134 VDIPIEIWVFVTTSCGYCPSAAVM-AWDFALAN------DYITSKVIDA-------SEN--------------------- 178 (229)
T ss_dssp CCSCEEEEEEECTTCTTHHHHHHH-HHHHHHHC------TTEEEEEEEG-------GGC---------------------
T ss_pred cCCCeEEEEEECCCCcchHHHHHH-HHHHHHHC------CCeEEEEEEC-------CCC---------------------
Confidence 345666889999998544 55555 77777663 2466666655 221
Q ss_pred ccHHHHHHHHHhhccCCccEEEEeCCCCce
Q 039432 319 LNSAVVNLIKQEWNFKEEPIMVVLDSQGMV 348 (598)
Q Consensus 319 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv 348 (598)
..+.+.|++++.|++++ +|++
T Consensus 179 ------~~l~~~~~v~~~Pt~~~---~G~~ 199 (229)
T 2ywm_A 179 ------QDLAEQFQVVGVPKIVI---NKGV 199 (229)
T ss_dssp ------HHHHHHTTCCSSSEEEE---GGGT
T ss_pred ------HHHHHHcCCcccCEEEE---CCEE
Confidence 12567789999999999 7774
No 205
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=92.97 E-value=0.009 Score=53.47 Aligned_cols=74 Identities=11% Similarity=0.158 Sum_probs=47.7
Q ss_pred cCcEEEEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCccc
Q 039432 241 KDKVVILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLN 320 (598)
Q Consensus 241 ~gK~VlLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~ 320 (598)
+.+.++++|.+.||++|+.+-..+.+.|... .....+.++.|-+ |++.. ++
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~---a~~~~~~l~~vdv-------~~~~~----------------~~--- 67 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLT---DEGRAAPVQRLQM-------RDPLP----------------PG--- 67 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGS---HHHHHSCEEEEET-------TSCCC----------------TT---
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHh---hhcccceEEEEEC-------CCCCc----------------hh---
Confidence 4578999999999876766644244555553 1223477888887 21100 11
Q ss_pred HHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 321 SAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 321 ~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+...++++++|+||+++ +|+.+.
T Consensus 68 ------la~~~~V~g~PT~i~f~-~G~ev~ 90 (116)
T 3dml_A 68 ------LELARPVTFTPTFVLMA-GDVESG 90 (116)
T ss_dssp ------CBCSSCCCSSSEEEEEE-TTEEEE
T ss_pred ------HHHHCCCCCCCEEEEEE-CCEEEe
Confidence 12345789999999999 999875
No 206
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=92.94 E-value=0.059 Score=60.58 Aligned_cols=68 Identities=7% Similarity=-0.161 Sum_probs=49.9
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.||.|+++|.+.|| +|....+. +.+++++.. +++.+++|-. |+..
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~-~~~la~~~~-----~~~~~~~vd~-------~~~~--------------------- 719 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPE-FELLARMIK-----GKVRAGKVDC-------QAYP--------------------- 719 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHH-HHHHHHHHT-----TTCEEEEEET-------TTCH---------------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHH-HHHHHHHhc-----CCceEEEEEC-------CCCH---------------------
Confidence 47999999999998 45566666 888888763 2466666665 2111
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
.+.+.|++++.|+++++ ++|+.+
T Consensus 720 ------~~~~~~~v~~~Pt~~~~-~~g~~~ 742 (780)
T 3apo_A 720 ------QTCQKAGIKAYPSVKLY-QYERAK 742 (780)
T ss_dssp ------HHHHHTTCCSSSEEEEE-EEETTT
T ss_pred ------HHHHhcCCCcCCEEEEE-cCCCcc
Confidence 25567899999999999 888865
No 207
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=92.65 E-value=0.15 Score=49.82 Aligned_cols=72 Identities=15% Similarity=0.105 Sum_probs=46.3
Q ss_pred eecCcEEEEEEecCCCCCh-hhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCC
Q 039432 239 ELKDKVVILLVSKPELLPL-EKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQ 317 (598)
Q Consensus 239 ~L~gK~VlLyfSal~~~~~-~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~ 317 (598)
.++|+.+.+.|.+.||+.| ...+. |.+++.+... +...++.++-|-+ +..
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~-l~~la~~~~~-~~~~~v~~~~vd~-------~~~-------------------- 185 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLL-AHMFAYEAWK-QGNPVILSEAVEA-------YEN-------------------- 185 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHH-HHHHHHHHHH-TTCCCEEEEEEET-------TTC--------------------
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHH-HHHHHHHccc-ccCCcEEEEEEEC-------ccC--------------------
Confidence 4779999999999998555 44555 7777665410 0113455555443 211
Q ss_pred cccHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 318 LLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 318 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
..+.+.|++++.|++++ +|+++
T Consensus 186 -------~~~~~~~~V~~vPt~~i---~G~~~ 207 (243)
T 2hls_A 186 -------PDIADKYGVMSVPSIAI---NGYLV 207 (243)
T ss_dssp -------HHHHHHTTCCSSSEEEE---TTEEE
T ss_pred -------HHHHHHcCCeeeCeEEE---CCEEE
Confidence 12456789999999998 78764
No 208
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=92.59 E-value=0.29 Score=45.14 Aligned_cols=70 Identities=9% Similarity=0.152 Sum_probs=46.0
Q ss_pred cCcEEEEEEecCC--CCChhhhhHHHHHHhcCcCCCCCCCC-eEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCC
Q 039432 241 KDKVVILLVSKPE--LLPLEKLFLLVHQTYDHPHNKNLEES-YKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQ 317 (598)
Q Consensus 241 ~gK~VlLyfSal~--~~~~~~~~~~L~~iY~~l~~~~~~~~-fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~ 317 (598)
.++.|+++|.+.| |++|..+.+.|.++=++. +++ +.|+-|=+ | +.
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~-----~g~~v~~~KVdv-------D--e~------------------ 80 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEF-----PDYTWQVAIADL-------E--QS------------------ 80 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTC-----TTSCCEEEECCH-------H--HH------------------
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHc-----CCCeEEEEEEEC-------C--CC------------------
Confidence 5677999999998 644544433366665553 233 55555433 2 21
Q ss_pred cccHHHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 318 LLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 318 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
..|.++|+++++|+|+++ .+|+++.
T Consensus 81 -------~~lA~~ygV~sIPTlilF-k~G~~v~ 105 (140)
T 2qgv_A 81 -------EAIGDRFGAFRFPATLVF-TGGNYRG 105 (140)
T ss_dssp -------HHHHHHHTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCccCCEEEEE-ECCEEEE
Confidence 235678899999999999 4787764
No 209
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=92.31 E-value=0.15 Score=42.80 Aligned_cols=24 Identities=8% Similarity=0.001 Sum_probs=18.8
Q ss_pred HHHHHHhhccCCccEEEEeCCCCceec
Q 039432 324 VNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 324 ~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
...+.+.+++++.|++ ++ +|+.+.
T Consensus 62 ~~~l~~~~~v~~~Pt~-~~--~g~~v~ 85 (116)
T 2e7p_A 62 QSALAHWTGRGTVPNV-FI--GGKQIG 85 (116)
T ss_dssp HHHHHHHHSCCSSCEE-EE--TTEEEE
T ss_pred HHHHHHHhCCCCcCEE-EE--CCEEEC
Confidence 4567888999999999 44 688774
No 210
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=92.19 E-value=0.16 Score=55.28 Aligned_cols=71 Identities=7% Similarity=-0.115 Sum_probs=48.2
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCC----CCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeec
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLE----ESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQ 315 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~----~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~ 315 (598)
.+|.|+++|.+.|| +|..+.+. +.+++++.... .+ +++.++=|-+ |+.
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~-l~~la~~~~~~-~g~~~~~~v~f~~VD~-------d~~------------------ 93 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYAST-FSKFAGGLKVE-HGKDALQIATAAAVNC-------ASE------------------ 93 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHH-HHHHHHTSCCS-SCSSGGGGCEEEEEET-------TTC------------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHH-HHHHHHHHhhh-cccccCceEEEEEEEC-------CCC------------------
Confidence 34889999999998 55566666 89999887421 11 1344444433 211
Q ss_pred CCcccHHHHHHHHHhhccCCccEEEEeCCCCc
Q 039432 316 PQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGM 347 (598)
Q Consensus 316 ~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGk 347 (598)
+.+.+.|++++.|+++++++.|.
T Consensus 94 ---------~~la~~y~V~~~PTlilf~~gg~ 116 (470)
T 3qcp_A 94 ---------VDLCRKYDINFVPRLFFFYPRDS 116 (470)
T ss_dssp ---------HHHHHHTTCCSSCEEEEEEESSC
T ss_pred ---------HHHHHHcCCCccCeEEEEECCCc
Confidence 13567789999999999987664
No 211
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=91.68 E-value=0.099 Score=55.13 Aligned_cols=66 Identities=6% Similarity=0.028 Sum_probs=46.4
Q ss_pred CcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCccc
Q 039432 242 DKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLN 320 (598)
Q Consensus 242 gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~ 320 (598)
|+.|+++|.+.|| +|....+. +.++.+++. +. |.++.+ |.++.
T Consensus 21 ~~~~lv~F~a~wC~~C~~~~p~-~~~~a~~~~-----~~--v~~~~v-------d~~~~--------------------- 64 (481)
T 3f8u_A 21 AGLMLVEFFAPWCGHAKRLAPE-YEAAATRLK-----GI--VPLAKV-------DCTAN--------------------- 64 (481)
T ss_dssp SSEEEEEEECTTCHHHHHHHHH-HHHHHHHTT-----TT--CCEEEE-------ETTTC---------------------
T ss_pred CCeEEEEEECCCCHHHHHhHHH-HHHHHHHhc-----Cc--eEEEEE-------ECCCC---------------------
Confidence 4899999999998 45566666 888888873 12 555555 22210
Q ss_pred HHHHHHHHHhhccCCccEEEEeCCCCce
Q 039432 321 SAVVNLIKQEWNFKEEPIMVVLDSQGMV 348 (598)
Q Consensus 321 ~~~~r~ike~~~~~~iP~LVvL~pqGkv 348 (598)
+.+.+.|++++.|+++++ .+|+.
T Consensus 65 ----~~l~~~~~v~~~Ptl~~~-~~g~~ 87 (481)
T 3f8u_A 65 ----TNTCNKYGVSGYPTLKIF-RDGEE 87 (481)
T ss_dssp ----HHHHHHTTCCEESEEEEE-ETTEE
T ss_pred ----HHHHHhcCCCCCCEEEEE-eCCce
Confidence 235678899999999999 56753
No 212
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=91.44 E-value=0.18 Score=51.01 Aligned_cols=65 Identities=12% Similarity=0.081 Sum_probs=44.5
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.|+++|.+.|| +|....+. |.++.+++.. .. .|+++.+ |.+...
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~-~~~la~~~~~---~~--~v~~~~v-------d~~~~~------------------- 313 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPI-WDKLGETYKD---HE--NIVIAKM-------DSTANE------------------- 313 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHH-HHHHHHHTTT---CS--SEEEEEE-------ETTTCB-------------------
T ss_pred CCCcEEEEEecCcCHhHHHHHHH-HHHHHHHhcc---CC--cEEEEEE-------ECCccc-------------------
Confidence 58999999999998 45566666 8888888731 22 4555555 222110
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCC
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQ 345 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pq 345 (598)
.+.|++++.|+++++...
T Consensus 314 --------~~~~~v~~~Pt~~~~~~~ 331 (361)
T 3uem_A 314 --------VEAVKVHSFPTLKFFPAS 331 (361)
T ss_dssp --------CSSCCCCSSSEEEEECSS
T ss_pred --------hhhcCCcccCeEEEEECC
Confidence 124589999999999655
No 213
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=91.32 E-value=0.35 Score=37.29 Aligned_cols=60 Identities=8% Similarity=-0.116 Sum_probs=39.2
Q ss_pred EEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcccHHHH
Q 039432 246 ILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLNSAVV 324 (598)
Q Consensus 246 lLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~~~~~ 324 (598)
-+.|.+.||+ |....+. |.++.++.. .++ .++.+ | +
T Consensus 3 ~v~f~a~wC~~C~~~~~~-l~~~~~~~~-----~~~--~~~~v-------~---------------------~------- 39 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKN-AREAVKELG-----IDA--EFEKI-------K---------------------E------- 39 (77)
T ss_dssp EEEEECSSSSTTHHHHHH-HHHHHHHTT-----CCE--EEEEE-------C---------------------S-------
T ss_pred EEEEEcCCChhHHHHHHH-HHHHHHHcC-----Cce--EEEEe-------c---------------------C-------
Confidence 3566777974 5555566 788877752 234 44555 2 1
Q ss_pred HHHHHhhccCCccEEEEeCCCCceech
Q 039432 325 NLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 325 r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
..+.+.|++++.|++++ +|+++..
T Consensus 40 ~~~~~~~~v~~~Pt~~~---~G~~~~~ 63 (77)
T 1ilo_A 40 MDQILEAGLTALPGLAV---DGELKIM 63 (77)
T ss_dssp HHHHHHHTCSSSSCEEE---TTEEEEC
T ss_pred HHHHHHCCCCcCCEEEE---CCEEEEc
Confidence 12445679999999999 8988754
No 214
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=91.13 E-value=0.39 Score=42.83 Aligned_cols=72 Identities=11% Similarity=0.120 Sum_probs=50.2
Q ss_pred CcEEEEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcccH
Q 039432 242 DKVVILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLNS 321 (598)
Q Consensus 242 gK~VlLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~~ 321 (598)
+|.|+++|.+.||+++......+.+..++ ++..++.|=+ |+ .+
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~-------~~v~~~~vdV-------de-----------------------~r 66 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE-------RDMDGYYLIV-------QQ-----------------------ER 66 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH-------HTCCEEEEEG-------GG-----------------------GH
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc-------CCceEEEEEe-------ec-----------------------Cc
Confidence 79999999999986665544436655542 2355555544 21 23
Q ss_pred HHHHHHHHhhccCC-ccEEEEeCCCCceech
Q 039432 322 AVVNLIKQEWNFKE-EPIMVVLDSQGMVTNS 351 (598)
Q Consensus 322 ~~~r~ike~~~~~~-iP~LVvL~pqGkv~~~ 351 (598)
++-..|.++|++++ .|+++++ .+|+++-.
T Consensus 67 ~~Sn~IA~~~~V~h~sPq~il~-k~G~~v~~ 96 (112)
T 3iv4_A 67 DLSDYIAKKTNVKHESPQAFYF-VNGEMVWN 96 (112)
T ss_dssp HHHHHHHHHHTCCCCSSEEEEE-ETTEEEEE
T ss_pred hhhHHHHHHhCCccCCCeEEEE-ECCEEEEE
Confidence 56678999999995 9999999 67887743
No 215
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=90.50 E-value=0.031 Score=48.00 Aligned_cols=36 Identities=8% Similarity=-0.009 Sum_probs=24.5
Q ss_pred eecceecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCc
Q 039432 235 LGVSELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHP 271 (598)
Q Consensus 235 V~Is~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l 271 (598)
+.++...||.+.+.|.+.||+ |....+. |.++.+++
T Consensus 5 ~~la~~~~k~~vV~F~A~WC~~C~~~~p~-~~~~a~~~ 41 (106)
T 3kp8_A 5 VGLAAHLRQIGGTMYGAYWCPHCQDQKEL-FGAAFDQV 41 (106)
T ss_dssp HHHHHHHHHHTCEEEECTTCHHHHHHHHH-HGGGGGGS
T ss_pred hHHHHhcCCCEEEEEECCCCHHHHHHHHH-HHHHHHhC
Confidence 445667788899999999984 4454444 66555443
No 216
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=90.28 E-value=3.8 Score=38.31 Aligned_cols=40 Identities=0% Similarity=-0.203 Sum_probs=26.6
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd 440 (598)
.++.+.++|.+. ...|+++.+.+.++ ++.+ .+.++.|.-+
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~-~v~~~~vd~~ 176 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND-YITSKVIDAS 176 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEEGG
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC-CeEEEEEECC
Confidence 456657777773 35569999999999 5542 5666666554
No 217
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=89.92 E-value=0.066 Score=45.78 Aligned_cols=19 Identities=21% Similarity=0.127 Sum_probs=16.7
Q ss_pred CcCccCCCchhHHhhhccc
Q 039432 361 GARGYPFSVTREIELWQEE 379 (598)
Q Consensus 361 G~~AfPFT~~r~e~L~~~e 379 (598)
|++|||||.+|+++|.++-
T Consensus 1 ~~~a~pfte~~~~~~~~~l 19 (89)
T 1v5n_A 1 GSSGSSGTEERLKEIEAKY 19 (89)
T ss_dssp CCCCCCCCSSCCSHHHHHH
T ss_pred CCcccccCHHHHHHHHHHH
Confidence 8999999999999996543
No 218
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=89.05 E-value=0.38 Score=49.58 Aligned_cols=73 Identities=14% Similarity=0.225 Sum_probs=48.5
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCC-CCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNL-EESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQL 318 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~-~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~ 318 (598)
.+|.|+++|.+.|| +|....+. +.++.++++.... +++ |+++-+ |.++
T Consensus 21 ~~~~vlV~F~a~wC~~C~~~~p~-~~~~a~~~~~~~~~~~~--v~~~~V-------d~~~-------------------- 70 (382)
T 2r2j_A 21 NADVALVNFYADWCRFSQMLHPI-FEEASDVIKEEFPNENQ--VVFARV-------DCDQ-------------------- 70 (382)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHH-HHHHHHHHTTCC---CC--EEEEEE-------ETTT--------------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHH-HHHHHHHHHhhcCCCCc--eEEEEE-------ECCc--------------------
Confidence 57999999999998 45555566 7888777731111 223 556665 2121
Q ss_pred ccHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 319 LNSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 319 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
+ +.+.+.|++++.|+++++ .+|+.+
T Consensus 71 -~----~~l~~~~~v~~~Pt~~~f-~~G~~~ 95 (382)
T 2r2j_A 71 -H----SDIAQRYRISKYPTLKLF-RNGMMM 95 (382)
T ss_dssp -C----HHHHHHTTCCEESEEEEE-ETTEEE
T ss_pred -c----HHHHHhcCCCcCCEEEEE-eCCcEe
Confidence 1 236677899999999987 478765
No 219
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=89.03 E-value=1.7 Score=41.22 Aligned_cols=97 Identities=9% Similarity=0.063 Sum_probs=53.7
Q ss_pred eecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCC--CCCC---------h-HhHHHHHHhh
Q 039432 239 ELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSS--ETWT---------D-VEERNFELFS 305 (598)
Q Consensus 239 ~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~--~~W~---------D-~de~~Fe~~~ 305 (598)
.-.||.+.+.|++.||| |..+.+. |.++.++ +..|+++..+.. .+.. . +..+.|.+.+
T Consensus 83 ~~~~k~~vv~F~d~~Cp~C~~~~~~-l~~l~~~--------~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~ 153 (216)
T 1eej_A 83 APQEKHVITVFTDITCGYCHKLHEQ-MADYNAL--------GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVM 153 (216)
T ss_dssp CTTCCEEEEEEECTTCHHHHHHHTT-HHHHHHT--------TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHH
T ss_pred CCCCCEEEEEEECCCCHHHHHHHHH-HHHHHhC--------CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHH
Confidence 34689999999999985 5555666 7766431 367777654111 1110 0 0123344433
Q ss_pred cCCCeeeeecCC-cccHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 306 CSLPWYSVRQPQ-LLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 306 ~~MPWyAVp~~~-~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
..-+ +++.. .........+.+.+++++.|++++. +|+.+
T Consensus 154 ~~~~---~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~~--dG~~~ 193 (216)
T 1eej_A 154 AGKS---VAPASCDVDIADHYALGVQLGVSGTPAVVLS--NGTLV 193 (216)
T ss_dssp TTCC---CCCCCCSCCHHHHHHHHHHHTCCSSSEEECT--TSCEE
T ss_pred hCCC---CChhHHHHHHHHHHHHHHHcCCCccCEEEEc--CCeEe
Confidence 3222 22211 0122344567789999999999664 45543
No 220
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=88.81 E-value=0.56 Score=49.87 Aligned_cols=67 Identities=7% Similarity=-0.023 Sum_probs=45.9
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.|+++|.+.|| +|....+. +.++.+++.. .++.++-|-. |.+
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~-~~~~a~~~~~----~~v~~~~vd~-------~~~---------------------- 75 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPE-YVKAAETLVE----KNITLAQIDC-------TEN---------------------- 75 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHH-HHHHHHHTTT----TTCEEEEEET-------TTC----------------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHH-HHHHHHHhcc----CCeEEEEEEC-------CCC----------------------
Confidence 47999999999998 45555566 7888777631 1344444333 111
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCc
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGM 347 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGk 347 (598)
+.+.++|++++.|+++++.. |+
T Consensus 76 -----~~l~~~~~v~~~Pt~~~~~~-g~ 97 (504)
T 2b5e_A 76 -----QDLCMEHNIPGFPSLKIFKN-SD 97 (504)
T ss_dssp -----HHHHHHTTCCSSSEEEEEET-TC
T ss_pred -----HHHHHhcCCCcCCEEEEEeC-Cc
Confidence 23677889999999999964 55
No 221
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=88.53 E-value=0.66 Score=47.03 Aligned_cols=74 Identities=19% Similarity=0.152 Sum_probs=44.2
Q ss_pred cCcEEEEEEecCCCCChhhhhH--HHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCc
Q 039432 241 KDKVVILLVSKPELLPLEKLFL--LVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQL 318 (598)
Q Consensus 241 ~gK~VlLyfSal~~~~~~~~~~--~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~ 318 (598)
++|.|++.|.|.||+|+...+. .+..+|+++.. ..++. .|.++-+ |.++.
T Consensus 27 ~~~~~lV~F~a~wC~c~~~~p~~~~~~~~~~~~a~-~~~~~-~v~~~~V-------d~~~~------------------- 78 (350)
T 1sji_A 27 KYDVLCLYYHESVSSDKVAQKQFQLKEIVLELVAQ-VLEHK-DIGFVMV-------DAKKE------------------- 78 (350)
T ss_dssp TCSEEEEEEECCSCSSSTTSHHHHHHHHHHHHHHH-HGGGS-SEEEEEE-------ETTTT-------------------
T ss_pred hCCeEEEEEECCCCcchhhCchhhhhhHHHHHHHH-HHhhc-CcEEEEE-------eCCCC-------------------
Confidence 3689999999999876444333 12333444310 01111 3556655 21210
Q ss_pred ccHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 319 LNSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 319 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
+.+.++|++++.|+++++ .+|++.
T Consensus 79 ------~~l~~~~~v~~~Pt~~~~-~~g~~~ 102 (350)
T 1sji_A 79 ------AKLAKKLGFDEEGSLYVL-KGDRTI 102 (350)
T ss_dssp ------HHHHHHHTCCSTTEEEEE-ETTEEE
T ss_pred ------HHHHHhcCCCccceEEEE-ECCcEE
Confidence 136678899999999999 678754
No 222
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=87.47 E-value=0.89 Score=38.99 Aligned_cols=52 Identities=13% Similarity=0.226 Sum_probs=39.8
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hhc--CceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRL--GLQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~--~~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|||.+. ...|+.+.+.+.++ ++- +..++++.|+.|...+.+++.++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~ 82 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYG 82 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHT
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHH
Confidence 799999999884 24468899999888 542 35899999999976666655543
No 223
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=87.26 E-value=0.69 Score=39.89 Aligned_cols=52 Identities=12% Similarity=0.305 Sum_probs=40.3
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcC--ceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLG--LQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~--~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|||.+. ...|+.+.+.+.++ ++-+ ..++++.|+.|...+.+++.++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~ 82 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYA 82 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHH
Confidence 789999999884 24468999999888 5432 5899999999977776666553
No 224
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=87.17 E-value=0.72 Score=40.00 Aligned_cols=52 Identities=15% Similarity=0.269 Sum_probs=40.4
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcC--ceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLG--LQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~--~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|||.+. ...|+.+.+.+.++ ++-+ ..++++.|+.|...+.+++.++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~ 82 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFA 82 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHT
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHH
Confidence 799999999884 24468999999988 5422 5899999999977777666553
No 225
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=86.93 E-value=0.72 Score=39.84 Aligned_cols=52 Identities=10% Similarity=-0.008 Sum_probs=39.8
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|+|.+. ...|+...+.+.++ ++ .+..++++.|+.|...+.+++.++
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 85 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVK 85 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHH
Confidence 789999999884 24458888888888 54 445799999999977777666554
No 226
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=86.83 E-value=3.6 Score=39.94 Aligned_cols=101 Identities=6% Similarity=0.019 Sum_probs=54.4
Q ss_pred ecCcEEEEEEecCCCCCh-hhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCC---------hHhHHHHHH-hhcCC
Q 039432 240 LKDKVVILLVSKPELLPL-EKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWT---------DVEERNFEL-FSCSL 308 (598)
Q Consensus 240 L~gK~VlLyfSal~~~~~-~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~---------D~de~~Fe~-~~~~M 308 (598)
-.+|.+...|++.+||.| .+-+. |.+..++ ++..|+|+++....+.. ..++.+|-. +...+
T Consensus 95 ~~ak~~v~~F~D~~Cp~C~~~~~~-l~~~~~~-------g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~ 166 (241)
T 1v58_A 95 KDAPVIVYVFADPFCPYCKQFWQQ-ARPWVDS-------GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASG 166 (241)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHH-HHHHHHT-------TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTT
T ss_pred CCCCeEEEEEECCCChhHHHHHHH-HHHHHhC-------CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHh
Confidence 467899999999998544 44444 6664443 35788888862111111 112223322 21111
Q ss_pred CeeeeecCCcccHH------HHHHHHHhhccCCccEEEEeCCCCce
Q 039432 309 PWYSVRQPQLLNSA------VVNLIKQEWNFKEEPIMVVLDSQGMV 348 (598)
Q Consensus 309 PWyAVp~~~~i~~~------~~r~ike~~~~~~iP~LVvL~pqGkv 348 (598)
.=-.+.-....+.+ .-..+.+.+++++.|++++.|.+|++
T Consensus 167 ~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~ 212 (241)
T 1v58_A 167 GKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL 212 (241)
T ss_dssp TCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE
T ss_pred ccCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE
Confidence 00000000000111 12345688999999999999988974
No 227
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=86.54 E-value=0.34 Score=46.43 Aligned_cols=45 Identities=16% Similarity=0.100 Sum_probs=34.9
Q ss_pred hhcCCCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCceechh
Q 039432 304 FSCSLPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNSN 352 (598)
Q Consensus 304 ~~~~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 352 (598)
-+..+||.+|++-. + ..+.+.++|++++.|+||+++++|++...+
T Consensus 178 d~~~~~~i~v~~~~--~--~~~~l~~~f~v~~~Pslvl~~~~g~~~~~~ 222 (244)
T 3q6o_A 178 DLSQHKGVAVRRVL--N--TEANVVRKFGVTDFPSCYLLFRNGSVSRVP 222 (244)
T ss_dssp HTTTCTTEEEEEEE--T--TCHHHHHHHTCCCSSEEEEEETTSCEEECC
T ss_pred HhccCCceEEEEEe--C--chHHHHHHcCCCCCCeEEEEeCCCCeEeec
Confidence 35567888887743 1 125567778999999999999999999887
No 228
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=85.74 E-value=0.89 Score=41.01 Aligned_cols=52 Identities=12% Similarity=0.257 Sum_probs=41.2
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cC-ceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LG-LQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~-~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|||.+. ...|+++.+.+.++ ++ .+ ..++++.|+.|...+.+++.++
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~ 102 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYA 102 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHT
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHH
Confidence 799999999884 35569999999998 54 22 5899999999987777766654
No 229
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=84.21 E-value=1.8 Score=38.85 Aligned_cols=51 Identities=8% Similarity=-0.007 Sum_probs=35.4
Q ss_pred cCCceeecceecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEc
Q 039432 230 MKSEQLGVSELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPI 287 (598)
Q Consensus 230 ~~~~kV~Is~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpi 287 (598)
+.++...+..-.+|.+...|++.||| |..+.+. |.+++++. + +..++|+++
T Consensus 10 ~~~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~-l~~l~~~~-----~-~v~~~~~~~ 61 (175)
T 3gyk_A 10 NDPNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAE-VQGLVDAD-----P-NVRLVYREW 61 (175)
T ss_dssp CCTTSCEEECTTCSEEEEEEECTTCHHHHHHHHH-HHHHHHHC-----T-TEEEEEEEC
T ss_pred cCCCCCCcCCCCCCEEEEEEECCCCccHHHHHHH-HHHHHHhC-----C-CEEEEEEeC
Confidence 44445566667899999999999985 4455565 88887763 2 266666665
No 230
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=83.69 E-value=1.5 Score=34.69 Aligned_cols=18 Identities=22% Similarity=0.410 Sum_probs=14.6
Q ss_pred HhhccCCccEEEEeCCCCcee
Q 039432 329 QEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 329 e~~~~~~iP~LVvL~pqGkv~ 349 (598)
+.+++++.|++++ +|+++
T Consensus 49 ~~~gv~~vPt~~i---~g~~~ 66 (80)
T 2k8s_A 49 EKAGVKSVPALVI---DGAAF 66 (80)
T ss_dssp HHHTCCEEEEEEE---TTEEE
T ss_pred HHcCCCcCCEEEE---CCEEE
Confidence 5679999999988 78764
No 231
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=82.69 E-value=0.39 Score=51.06 Aligned_cols=68 Identities=16% Similarity=0.136 Sum_probs=44.1
Q ss_pred cCcEEEEEEecCCC-CChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcc
Q 039432 241 KDKVVILLVSKPEL-LPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLL 319 (598)
Q Consensus 241 ~gK~VlLyfSal~~-~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i 319 (598)
.+|.|+++|.+.|| +|....+. +.++.++... ..-.|+++-+ |.+.. +
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~-~~~l~~~~~~----~~~~v~~~~v-------d~~~~-----------------~-- 423 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPT-YQELADTYAN----ATSDVLIAKL-------DHTEN-----------------D-- 423 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHH-HHHHHHHHHH----HCSSCEEEEE-------EGGGC-----------------C--
T ss_pred CCCCEEEEEECCCChhHHHHhHH-HHHHHHHhhc----cCCcEEEEEe-------cCCcc-----------------c--
Confidence 48999999999998 45555566 7777776520 1123566666 32210 0
Q ss_pred cHHHHHHHHHhhccCCccEEEEeCCCCce
Q 039432 320 NSAVVNLIKQEWNFKEEPIMVVLDSQGMV 348 (598)
Q Consensus 320 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv 348 (598)
+.. |++++.|+++++ ++|+.
T Consensus 424 -------~~~-~~v~~~Pt~~~~-~~G~~ 443 (504)
T 2b5e_A 424 -------VRG-VVIEGYPTIVLY-PGGKK 443 (504)
T ss_dssp -------CSS-CCCSSSSEEEEE-CCTTS
T ss_pred -------ccc-CCceecCeEEEE-eCCce
Confidence 011 578999999999 77864
No 232
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=82.50 E-value=1 Score=42.57 Aligned_cols=68 Identities=10% Similarity=0.089 Sum_probs=44.7
Q ss_pred CcEEEEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcccH
Q 039432 242 DKVVILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLNS 321 (598)
Q Consensus 242 gK~VlLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~~ 321 (598)
+|.|++-|+|.||+||..+.+.|.++=++.. +. ++|+-+| -|+. |+
T Consensus 41 ~k~VVVdF~A~WCgPCk~m~PvleelA~e~~-----~~--v~f~kVD-------VDe~----------------~e---- 86 (160)
T 2av4_A 41 ERLVCIRFGHDYDPDCMKMDELLYKVADDIK-----NF--CVIYLVD-------ITEV----------------PD---- 86 (160)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHT-----TT--EEEEEEE-------TTTC----------------CT----
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHcc-----CC--cEEEEEE-------CCCC----------------HH----
Confidence 5899999999998677666554666655531 22 4555552 2221 22
Q ss_pred HHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 322 AVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 322 ~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
+.+.|+++.+|+++++- +|+.+
T Consensus 87 -----~a~~y~V~siPT~~fFk-~G~~v 108 (160)
T 2av4_A 87 -----FNTMYELYDPVSVMFFY-RNKHM 108 (160)
T ss_dssp -----TTTTTTCCSSEEEEEEE-TTEEE
T ss_pred -----HHHHcCCCCCCEEEEEE-CCEEE
Confidence 35678999999999884 56665
No 233
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=82.06 E-value=0.67 Score=40.65 Aligned_cols=87 Identities=11% Similarity=0.025 Sum_probs=51.0
Q ss_pred CcEEEEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcccH
Q 039432 242 DKVVILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLNS 321 (598)
Q Consensus 242 gK~VlLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~~ 321 (598)
++.|.++|.+.||++|..+.+.|.++-++. .+ +.|+-+ |.++.
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~------~~--v~f~kv-------d~d~~---------------------- 65 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKF------PE--TKFVKA-------IVNSC---------------------- 65 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHC------TT--SEEEEE-------EGGGT----------------------
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHC------CC--CEEEEE-------EhHHh----------------------
Confidence 458999999999855554443355543332 12 456666 33320
Q ss_pred HHHHHHHHhhccCCccEEEEeCCCCceechhHHHHHHHhCcCccCCCchhHHhhh
Q 039432 322 AVVNLIKQEWNFKEEPIMVVLDSQGMVTNSNALDMVLIWGARGYPFSVTREIELW 376 (598)
Q Consensus 322 ~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AfPFT~~r~e~L~ 376 (598)
.+.|+++++|+++++- +|+.+..-. +. ...|-+ -||.+.+|..-
T Consensus 66 ------~~~~~v~~~PT~~~fk-~G~~v~~~~-G~-~~~gg~--~~~~~~le~~L 109 (118)
T 3evi_A 66 ------IQHYHDNCLPTIFVYK-NGQIEAKFI-GI-IECGGI--NLKLEELEWKL 109 (118)
T ss_dssp ------STTCCGGGCSEEEEEE-TTEEEEEEE-ST-TTTTCS--SCCHHHHHHHH
T ss_pred ------HHHCCCCCCCEEEEEE-CCEEEEEEe-Ch-hhhCCC--CCCHHHHHHHH
Confidence 1456899999999995 787775321 11 122222 47777776543
No 234
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=82.02 E-value=1.9 Score=37.14 Aligned_cols=53 Identities=6% Similarity=-0.026 Sum_probs=41.5
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHH---H-Hh-cCceeeEEEeccCCchhhHHHHhhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMME---I-RR-LGLQVDMVFVGVKNPSEQVRNVLAT 452 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~---i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~~ 452 (598)
.||.+.|+|-+. ...|+...+.+.+ + ++ .+..++++.|+.|+..+.+++.++.
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~ 88 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRND 88 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGG
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHh
Confidence 689999999774 3556888899988 7 43 4678999999999888877766654
No 235
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=81.33 E-value=2.5 Score=35.84 Aligned_cols=49 Identities=16% Similarity=0.214 Sum_probs=39.2
Q ss_pred cCcEEEEEcCCChhHH---HHHHHHHHHH-Hh--cCceeeEEEeccCCchhhHHHHh
Q 039432 400 EGRNICLYGSENKDWI---IEFNAKMMEI-RR--LGLQVDMVFVGVKNPSEQVRNVL 450 (598)
Q Consensus 400 egK~I~LYgg~d~~Wi---r~FT~~l~~i-~~--~~~~~E~v~Vgkd~~~e~v~~~~ 450 (598)
.||.+.|||.+ .|| +...+.+.++ ++ .+..++++.|+.|...+.+++..
T Consensus 32 ~gk~vll~F~~--~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~ 86 (148)
T 3fkf_A 32 RNRYLLLNFWA--SWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAI 86 (148)
T ss_dssp TTSEEEEEEEC--GGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHH
T ss_pred CCcEEEEEEEC--CCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHH
Confidence 79999999988 565 8999999999 54 44569999999987777666555
No 236
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=80.91 E-value=2.3 Score=36.97 Aligned_cols=53 Identities=11% Similarity=0.055 Sum_probs=36.8
Q ss_pred cCcEEEEEcCCC-hhHHHHH-HHHHHHH-Hh-cCceeeEEEeccC------CchhhHHHHhhh
Q 039432 400 EGRNICLYGSEN-KDWIIEF-NAKMMEI-RR-LGLQVDMVFVGVK------NPSEQVRNVLAT 452 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~F-T~~l~~i-~~-~~~~~E~v~Vgkd------~~~e~v~~~~~~ 452 (598)
.||.+.|+|.+. ...|+.. .+.+.++ ++ .+..++++.|+.+ +..+.+++.++.
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~ 91 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDE 91 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHH
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHH
Confidence 799999999884 2445774 8888888 54 3446999999863 445555555443
No 237
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=80.59 E-value=2.1 Score=40.70 Aligned_cols=22 Identities=14% Similarity=0.274 Sum_probs=17.8
Q ss_pred HHHhhccCCccEEEEeCCCCce
Q 039432 327 IKQEWNFKEEPIMVVLDSQGMV 348 (598)
Q Consensus 327 ike~~~~~~iP~LVvL~pqGkv 348 (598)
+.+.|+++++|+|+++-+.|+.
T Consensus 95 la~~~~I~siPtl~~F~~g~~~ 116 (178)
T 3ga4_A 95 LVKDLKLQNVPHLVVYPPAESN 116 (178)
T ss_dssp HHHHTTCCSSCEEEEECCCCGG
T ss_pred HHHHcCCCCCCEEEEEcCCCCC
Confidence 4566799999999999876644
No 238
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=79.82 E-value=2 Score=44.19 Aligned_cols=73 Identities=15% Similarity=0.135 Sum_probs=44.4
Q ss_pred cCcEEEEEEecCCCCChhhhhHHHH---HHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCC
Q 039432 241 KDKVVILLVSKPELLPLEKLFLLVH---QTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQ 317 (598)
Q Consensus 241 ~gK~VlLyfSal~~~~~~~~~~~L~---~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~ 317 (598)
.++.|++.|.|.||.+|...+. |. .+|+++...-.+. .|.+.-+ |.++.
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~-l~~~~p~~e~~a~~~~~~--~v~~~~V-------d~~~~------------------ 80 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQ-FEMEELILELAAQVLEDK--GVGFGLV-------DSEKD------------------ 80 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHH-HHHHHHHHHHHHHHHTTT--TEEEEEE-------ETTTT------------------
T ss_pred hCCeEEEEEECCCchhHHHhhh-hccccHHHHHHHHHhhcC--CceEEEE-------eCccc------------------
Confidence 4689999999999866433332 32 3455441000111 3666666 22221
Q ss_pred cccHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 318 LLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 318 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
+.|.++|++++.|+++++. +|+.+
T Consensus 81 -------~~l~~~~~V~~~PTl~~f~-~G~~~ 104 (367)
T 3us3_A 81 -------AAVAKKLGLTEEDSIYVFK-EDEVI 104 (367)
T ss_dssp -------HHHHHHHTCCSTTEEEEEE-TTEEE
T ss_pred -------HHHHHHcCCCcCceEEEEE-CCcEE
Confidence 1367788999999999997 57654
No 239
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=79.81 E-value=2.3 Score=36.94 Aligned_cols=52 Identities=8% Similarity=0.071 Sum_probs=39.1
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|+|.+. ...|+...+.+.++ ++ .+..++++.|+.|...+.+++.++
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~ 82 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIE 82 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHH
Confidence 799999999874 24469999999888 54 444699999999876666655443
No 240
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=79.50 E-value=1.5 Score=37.25 Aligned_cols=52 Identities=6% Similarity=0.073 Sum_probs=39.9
Q ss_pred cCcEEEEEcCCChhHH---HHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHhhhh
Q 039432 400 EGRNICLYGSENKDWI---IEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVLATI 453 (598)
Q Consensus 400 egK~I~LYgg~d~~Wi---r~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~~i 453 (598)
.||.+.|||.+ .|| +...+.+.++ +. .+..++++.|+.|+..+.+++.++..
T Consensus 30 ~gk~vll~f~~--~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~ 86 (148)
T 3hcz_A 30 QAKYTILFFWD--SQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSK 86 (148)
T ss_dssp CCSEEEEEEEC--GGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHH
T ss_pred CCCEEEEEEEC--CCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHc
Confidence 79999999988 555 8888888888 54 33469999999997777766666444
No 241
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=78.84 E-value=4.1 Score=38.64 Aligned_cols=95 Identities=11% Similarity=0.103 Sum_probs=51.9
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCC--CC---------CC-hHhHHHHHHhhcC
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSS--ET---------WT-DVEERNFELFSCS 307 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~--~~---------W~-D~de~~Fe~~~~~ 307 (598)
.+|.+...|++.||| |..+-+. |.+ |.+ . +.+|+|+..+.. .+ |. ....+.|.+.+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~-l~~-~~~-----~--~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~ 155 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQ-LKE-YND-----L--GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKG 155 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTT-HHH-HHH-----T--TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCCHhHHHHHHH-HHH-HHh-----C--CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcC
Confidence 578999999999985 4455555 666 332 1 367776644111 00 00 0112234444433
Q ss_pred CCeeeeecCC-cccHHHHHHHHHhhccCCccEEEEeCCCCcee
Q 039432 308 LPWYSVRQPQ-LLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 308 MPWyAVp~~~-~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
-+ ++... .........+.+.++++|.|++++ .+|+.+
T Consensus 156 ~~---~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi--~nG~~~ 193 (211)
T 1t3b_A 156 NL---PKEVKTPNIVKKHYELGIQFGVRGTPSIVT--STGELI 193 (211)
T ss_dssp CC---CSSCCCSSHHHHHHHHHHHHTCCSSCEEEC--TTSCCC
T ss_pred CC---CChHHHHHHHHHHHHHHHHcCCCcCCEEEE--eCCEEe
Confidence 21 12111 011233446678999999999998 567744
No 242
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=77.82 E-value=4.9 Score=37.72 Aligned_cols=63 Identities=13% Similarity=0.171 Sum_probs=46.2
Q ss_pred ceeecce-ecCcEEEEEEecCC-C-CChhhhhHHHHHHhcCcCCCCCCCCeE-EEEEEcCCCCCCChHhHHHHHHhh
Q 039432 233 EQLGVSE-LKDKVVILLVSKPE-L-LPLEKLFLLVHQTYDHPHNKNLEESYK-IVWVPISSSETWTDVEERNFELFS 305 (598)
Q Consensus 233 ~kV~Is~-L~gK~VlLyfSal~-~-~~~~~~~~~L~~iY~~l~~~~~~~~fE-IVwIpid~~~~W~D~de~~Fe~~~ 305 (598)
.+|.+++ ++||.|.|||=-.+ + .|..++.. +.+.|++++ +.+.+ |+=||.|. -...+.|-+-.
T Consensus 32 ~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~-f~~~~~ef~----~~gv~~VigIS~D~-----~~~~~~w~~~~ 98 (171)
T 2xhf_A 32 KSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPE-YLSLYDKFK----EEGYHTIACIAVND-----PFVMAAWGKTV 98 (171)
T ss_dssp CEEETHHHHTTSEEEEEECSCTTCTTTTSSHHH-HHHTHHHHH----HTTCCEEEEEESSC-----HHHHHHHHHHH
T ss_pred cEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHH-HHHHHHHHH----HCCCCEEEEEeCCC-----HHHHHHHHHhc
Confidence 6899999 59999888876554 3 57788888 899999984 23575 99999842 33466676544
No 243
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=76.85 E-value=3.6 Score=33.06 Aligned_cols=47 Identities=2% Similarity=-0.044 Sum_probs=35.8
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
+.+||.+.+||.++ ..+|+.+.+.+.++ +..+..+.++.|..+...+
T Consensus 18 ~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 66 (109)
T 3tco_A 18 IRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQK 66 (109)
T ss_dssp HHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHH
T ss_pred HhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHH
Confidence 45799999999886 36779999999999 6645467777777775443
No 244
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=76.81 E-value=2.7 Score=36.99 Aligned_cols=51 Identities=6% Similarity=0.084 Sum_probs=38.1
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVL 450 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~ 450 (598)
.||.+.|+|.+. ...|+...+.+.++ ++ .+..++++.|+.|...+.+++..
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~ 87 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSA 87 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHH
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHH
Confidence 789999999884 23357888888888 54 34469999999998777665544
No 245
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=75.22 E-value=4.8 Score=34.54 Aligned_cols=52 Identities=13% Similarity=0.013 Sum_probs=38.9
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|||.+. ...|+.+.+.+.++ +. .+..++++.|+.+...+.+++..+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~ 81 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLA 81 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHH
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHH
Confidence 789999988774 35579999999888 54 344599999999876666655543
No 246
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=75.13 E-value=4.4 Score=33.57 Aligned_cols=51 Identities=10% Similarity=-0.030 Sum_probs=38.7
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|+|.+. ...|+.+.+.+.++ ++.+ .++++.|+.++..+.+++..+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~ 76 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVN 76 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHH
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHH
Confidence 788888888774 35568889999988 6555 789999998876666655553
No 247
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=75.09 E-value=4.8 Score=34.83 Aligned_cols=52 Identities=12% Similarity=0.175 Sum_probs=41.2
Q ss_pred cCcEEEEEcCCC-hhH--HHHHHHHHHHH-Hh--cCceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDW--IIEFNAKMMEI-RR--LGLQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~W--ir~FT~~l~~i-~~--~~~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|+|.+. ... |+...+.+.++ ++ .+..++++.|+.|+..+.+++.++
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~ 89 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIK 89 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHH
Confidence 799999999874 356 88899999998 54 455699999999987777766653
No 248
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=74.60 E-value=4 Score=35.87 Aligned_cols=40 Identities=5% Similarity=0.090 Sum_probs=32.5
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd 440 (598)
.||.+.|+|.+. ...|+...+.+.++ ++-+ .++++.|+.|
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d 77 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFW 77 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECC
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEec
Confidence 789999998773 34469999999999 6555 8999999887
No 249
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=74.24 E-value=6.8 Score=32.49 Aligned_cols=19 Identities=11% Similarity=0.324 Sum_probs=14.4
Q ss_pred HHhhccCCccEEEEeCCCCcee
Q 039432 328 KQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 328 ke~~~~~~iP~LVvL~pqGkv~ 349 (598)
.++++++ +|++++ .+|+.+
T Consensus 41 ~~~~g~~-vPtl~~--~~G~~v 59 (87)
T 1ttz_A 41 ESAYGLR-VPVLRD--PMGREL 59 (87)
T ss_dssp HHHHTTT-CSEEEC--TTCCEE
T ss_pred HHHhCCC-cCeEEE--ECCEEE
Confidence 3456777 999987 679887
No 250
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=74.00 E-value=5 Score=32.23 Aligned_cols=46 Identities=9% Similarity=-0.060 Sum_probs=34.1
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
+..||.+.++|.++ ..+|+.+.+.+.++ ++.+..+.++.|.-++..
T Consensus 14 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~ 61 (105)
T 1nsw_A 14 IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENP 61 (105)
T ss_dssp HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCH
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCH
Confidence 45788899998885 36679999999999 654445777777766433
No 251
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=73.45 E-value=6.4 Score=31.41 Aligned_cols=45 Identities=9% Similarity=-0.074 Sum_probs=35.3
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
.+|.+.+||.++ ..+|+.+.+.+.++ +..+..+.++.|.-++..+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 64 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPS 64 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHH
Confidence 789999999886 36779999999999 6655558888888775444
No 252
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=73.28 E-value=4.9 Score=34.13 Aligned_cols=52 Identities=8% Similarity=-0.006 Sum_probs=38.4
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHH---H-Hh-cCceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMME---I-RR-LGLQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~---i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|+|.+. ...|+...+.+.+ + +. .+..++++.|+.|+..+.+++.++
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~ 83 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAV 83 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHT
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHH
Confidence 799999999884 3556888777776 6 33 344699999999977777666553
No 253
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=73.28 E-value=7 Score=31.24 Aligned_cols=44 Identities=9% Similarity=-0.002 Sum_probs=33.5
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCc
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNP 442 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~ 442 (598)
..||.+.+||.++ ..+|+.+.+.+.++ ++.+..+.++.|.-++.
T Consensus 18 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 63 (107)
T 2i4a_A 18 KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDN 63 (107)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTC
T ss_pred hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCC
Confidence 4789999999885 36679999999998 65444677777776643
No 254
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=73.15 E-value=8.4 Score=31.60 Aligned_cols=51 Identities=14% Similarity=0.092 Sum_probs=36.3
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEe-----ccCCchhhHHHHh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFV-----GVKNPSEQVRNVL 450 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~V-----gkd~~~e~v~~~~ 450 (598)
.||.+.|||.+. ...|+...+.+.++ +..+..+.++.| +.++..+.+++..
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~ 78 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWY 78 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHH
Confidence 799999999874 35568888888888 666678888888 3344445444444
No 255
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=72.99 E-value=6.1 Score=35.70 Aligned_cols=52 Identities=10% Similarity=0.092 Sum_probs=37.6
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCC-------chhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKN-------PSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~-------~~e~v~~~~~ 451 (598)
.||.+.|+|.+. ...|+.-.+.+.++ ++ .+..++++.|+.|. ..+.+++..+
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~ 98 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFAR 98 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHH
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHH
Confidence 899999999883 24458888889888 54 45569999998653 4455555443
No 256
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=72.96 E-value=3.2 Score=36.00 Aligned_cols=43 Identities=12% Similarity=-0.102 Sum_probs=34.5
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCc
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNP 442 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~ 442 (598)
.||.+.|+|.+. ...|+...+.+.++ ++ .+..++++.|+.|++
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~ 68 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTS 68 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCh
Confidence 799999999884 24468888999888 55 467899999999853
No 257
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=72.61 E-value=7.8 Score=31.19 Aligned_cols=45 Identities=7% Similarity=-0.071 Sum_probs=34.0
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
..||.+.++|.++ ..+|+.+.+.+.++ ++.+..+.++.|.-++..
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~ 64 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP 64 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCT
T ss_pred hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCH
Confidence 4789999999885 36679999999999 654446788888766433
No 258
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=72.27 E-value=5.6 Score=33.77 Aligned_cols=45 Identities=13% Similarity=0.113 Sum_probs=35.1
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCc
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNP 442 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~ 442 (598)
...||.+.++|.+. ...|+.+.+.+.++ ++.+..+.++.|.-+..
T Consensus 39 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~ 85 (128)
T 3ul3_B 39 NMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKN 85 (128)
T ss_dssp TSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGC
T ss_pred HccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCC
Confidence 45899999999985 35679999999999 65445788888877643
No 259
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=72.23 E-value=7.7 Score=33.60 Aligned_cols=52 Identities=12% Similarity=0.070 Sum_probs=38.9
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|||.+. ...|+.+.+.+.++ ++ .+..++++.|+.|+..+.+++.++
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~ 87 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMK 87 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHH
Confidence 789999999874 35568888888888 54 444699999998876666655543
No 260
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=72.17 E-value=6.7 Score=33.72 Aligned_cols=52 Identities=17% Similarity=0.113 Sum_probs=38.4
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|||.+. ...|+...+.+.++ ++ .+..++++.|+.+...+.+++..+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~ 79 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMK 79 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHH
Confidence 789999999874 35568888888888 54 344689999998866666655443
No 261
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=71.71 E-value=3.7 Score=36.68 Aligned_cols=40 Identities=5% Similarity=0.097 Sum_probs=30.0
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd 440 (598)
.||.+.|+|.+. ...|+ ..+.+.++ ++ .+..++++.|+.|
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d 73 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCN 73 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECc
Confidence 799999999873 23358 88888888 54 3446999999875
No 262
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=71.28 E-value=4.7 Score=38.02 Aligned_cols=100 Identities=8% Similarity=0.081 Sum_probs=60.8
Q ss_pred ceeecce-ecCcEEEEEEecC-CC-CCh-hhhhHHHHHHhcCc-CCCCCCCCeE-EEEEEcCCCCCCChHhHHHHHHhhc
Q 039432 233 EQLGVSE-LKDKVVILLVSKP-EL-LPL-EKLFLLVHQTYDHP-HNKNLEESYK-IVWVPISSSETWTDVEERNFELFSC 306 (598)
Q Consensus 233 ~kV~Is~-L~gK~VlLyfSal-~~-~~~-~~~~~~L~~iY~~l-~~~~~~~~fE-IVwIpid~~~~W~D~de~~Fe~~~~ 306 (598)
..|.+++ ++||.|.|||=-. |+ .|. .++.. +.+.|+++ +. .+.+ |+=||.|. -...+.|-+-..
T Consensus 33 ~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~-f~~~~~~f~~~----~g~~~V~gvS~D~-----~~~~~~~~~~~~ 102 (182)
T 1xiy_A 33 TSIDTHELFNNKKILLISLPGAFTPTCSTKMIPG-YEEEYDYFIKE----NNFDDIYCITNND-----IYVLKSWFKSMD 102 (182)
T ss_dssp EEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHH-HHHTHHHHHTT----SCCSEEEEEESSC-----HHHHHHHHHHTT
T ss_pred eeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHH-HHHHHHHHHHh----CCCcEEEEEeCCC-----HHHHHHHHHHcC
Confidence 5899988 6999888877554 44 355 57777 88888887 52 3574 88899832 334566665433
Q ss_pred --CCCeeeeecCCcccHHHHHHHHHhhccC------C-----ccEEEEeCCCCceechh
Q 039432 307 --SLPWYSVRQPQLLNSAVVNLIKQEWNFK------E-----EPIMVVLDSQGMVTNSN 352 (598)
Q Consensus 307 --~MPWyAVp~~~~i~~~~~r~ike~~~~~------~-----iP~LVvL~pqGkv~~~n 352 (598)
..|=+| |.. +.+.+.|++- | .....|+| +|+|....
T Consensus 103 ~~~f~lLs-------D~~--~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~~ 151 (182)
T 1xiy_A 103 IKKIKYIS-------DGN--SSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKMF 151 (182)
T ss_dssp CCSSEEEE-------CTT--SHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEEE
T ss_pred CCCceEEE-------eCc--hHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEEE
Confidence 122222 211 2233444431 2 45566778 99988654
No 263
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=71.21 E-value=3.5 Score=35.39 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=38.5
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVL 450 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~ 450 (598)
.||.+.|||.+. ...|+...+.+.++ ++ .+..+.++.|+.|...+.+++..
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~ 82 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMV 82 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHH
Confidence 789999999874 35568899999888 54 45579999999887666555544
No 264
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=71.09 E-value=4.8 Score=34.24 Aligned_cols=26 Identities=12% Similarity=0.017 Sum_probs=20.3
Q ss_pred HHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 322 AVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 322 ~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+..+.+.+.+++++.|++++ +|+.+.
T Consensus 62 ~~~~~l~~~~g~~~vP~v~i---~g~~ig 87 (114)
T 2hze_A 62 ELRDYFEQITGGKTVPRIFF---GKTSIG 87 (114)
T ss_dssp HHHHHHHHHHSCCSSCEEEE---TTEEEE
T ss_pred HHHHHHHHHhCCCCcCEEEE---CCEEEe
Confidence 55677888899999998865 677763
No 265
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=71.08 E-value=6.7 Score=31.57 Aligned_cols=46 Identities=7% Similarity=-0.107 Sum_probs=34.5
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
..||.+.++|.++ ..+|+.+.+.+.++ ++.+..+.++.|..++..+
T Consensus 17 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~ 64 (107)
T 1dby_A 17 ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPN 64 (107)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHH
Confidence 3688888888885 46779999999999 6544458888887775433
No 266
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=71.01 E-value=6.7 Score=31.93 Aligned_cols=46 Identities=7% Similarity=0.076 Sum_probs=34.4
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
+.||.+.++|.++ ...|+.+.+.+.++ ++-+..+.++.|.-++..+
T Consensus 21 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~ 68 (112)
T 1t00_A 21 KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPG 68 (112)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHH
Confidence 4689899999885 36679999999999 6544458888888775443
No 267
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=70.96 E-value=5.6 Score=31.73 Aligned_cols=45 Identities=7% Similarity=-0.106 Sum_probs=34.1
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCc
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNP 442 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~ 442 (598)
+..||.+.+||.++ ..+|+.+.+.+.++ ++.+..+.++.|..++.
T Consensus 15 ~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~ 61 (109)
T 2yzu_A 15 LGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDEN 61 (109)
T ss_dssp HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTC
T ss_pred hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCC
Confidence 45789999999885 36679999999999 65444578888877643
No 268
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=70.58 E-value=5.1 Score=31.32 Aligned_cols=66 Identities=11% Similarity=0.114 Sum_probs=38.7
Q ss_pred EEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcccHHHHH
Q 039432 246 ILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLNSAVVN 325 (598)
Q Consensus 246 lLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~~~~~r 325 (598)
.++|++.||+.|......|.++-.+. .+++++.|-+ |.+.+. .+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~------~~i~~~~vdi-------~~~~~~-----------------------~~ 46 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNER------DDFQYQYVDI-------RAEGIT-----------------------KE 46 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHH------SSCEEEEECH-------HHHTCC-----------------------SH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcC------CCceEEEEec-------ccChHH-----------------------HH
Confidence 45789999865655443366654331 2366666666 332210 12
Q ss_pred HHHHhhc--cCCccEEEEeCCCCceec
Q 039432 326 LIKQEWN--FKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 326 ~ike~~~--~~~iP~LVvL~pqGkv~~ 350 (598)
.+.+.++ +++.|++++ +|+.+.
T Consensus 47 ~l~~~~~~~~~~vP~i~~---~g~~i~ 70 (85)
T 1ego_A 47 DLQQKAGKPVETVPQIFV---DQQHIG 70 (85)
T ss_dssp HHHHHTCCCSCCSCEEEE---TTEEEE
T ss_pred HHHHHhCCCCceeCeEEE---CCEEEE
Confidence 3556677 899999854 577763
No 269
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=70.27 E-value=7.6 Score=32.59 Aligned_cols=42 Identities=14% Similarity=-0.016 Sum_probs=33.5
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKN 441 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~ 441 (598)
.||.+.|+|.+. ...|+.+.+.+.++ +. .+..++++.|+.+.
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 77 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVN 77 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGG
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccC
Confidence 789999999874 35679999999999 55 33679999998875
No 270
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=70.22 E-value=9.5 Score=30.39 Aligned_cols=44 Identities=16% Similarity=0.101 Sum_probs=33.8
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
.||.+.+||.++ ..+|+++.+.+.++ ++.+..+.++.|..++..
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~ 64 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECE 64 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchH
Confidence 789999999885 36679999999999 654456778888777433
No 271
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=70.08 E-value=3.8 Score=37.08 Aligned_cols=50 Identities=8% Similarity=-0.013 Sum_probs=37.4
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchhhHHHHhhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSEQVRNVLAT 452 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e~v~~~~~~ 452 (598)
.||.+.|||.+. ...|+...+.+.++ ++ .++++.|+.++..+.+++.++.
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~ 108 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNE 108 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHH
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHH
Confidence 689999999873 24458888888888 44 5899999977777776666543
No 272
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=69.96 E-value=6.5 Score=31.89 Aligned_cols=46 Identities=4% Similarity=-0.042 Sum_probs=34.5
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
..||.+.+||.++ ..+|+.+.+.+.++ ++.+..+.++.|.-++..+
T Consensus 23 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~ 70 (115)
T 1thx_A 23 KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPT 70 (115)
T ss_dssp TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHH
T ss_pred cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHH
Confidence 4788999999885 35679999999999 6544458888887775443
No 273
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=69.66 E-value=7.1 Score=32.65 Aligned_cols=45 Identities=7% Similarity=0.004 Sum_probs=34.1
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
..||.+.+||.++ ...|+.+.+.+.++ ++.+..+.++.|.-++..
T Consensus 29 ~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~ 75 (119)
T 1w4v_A 29 NSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHT 75 (119)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTH
T ss_pred cCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCH
Confidence 4688999999885 36679999999999 654446888888777433
No 274
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=69.64 E-value=7.4 Score=32.09 Aligned_cols=44 Identities=7% Similarity=-0.007 Sum_probs=32.5
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCc
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNP 442 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~ 442 (598)
+++||.+.++|.++ ..+|+.+.+.+.++ ++.+ .+.++.|..|..
T Consensus 21 ~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-~~~~~~vd~~~~ 66 (109)
T 3f3q_A 21 IAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDEL 66 (109)
T ss_dssp TTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTC
T ss_pred HhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCC
Confidence 56899999999985 36679999999999 5422 266666766643
No 275
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=69.01 E-value=7 Score=35.39 Aligned_cols=42 Identities=5% Similarity=0.045 Sum_probs=31.7
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKN 441 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~ 441 (598)
.||.+.|+|.+. ...|+...+.+.++ ++ .+..++++.|+.|.
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~ 92 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQ 92 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcC
Confidence 799999999883 23458888888888 54 34469999998763
No 276
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=68.51 E-value=7.6 Score=32.28 Aligned_cols=51 Identities=8% Similarity=0.094 Sum_probs=38.5
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|+|.+. ...|+.+.+.+.++ ++-+ .++++.|+.++..+.+++..+
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~ 75 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVS 75 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHH
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHH
Confidence 789888888774 35568888889888 6555 899999998876666655543
No 277
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=68.21 E-value=6.9 Score=32.19 Aligned_cols=44 Identities=7% Similarity=-0.045 Sum_probs=33.1
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCc
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNP 442 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~ 442 (598)
++.||.+.+||.++ ..+|+.+.+.+.++ ++.+ .+.++.|..++.
T Consensus 23 ~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~~ 68 (112)
T 1syr_A 23 ISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEV 68 (112)
T ss_dssp HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTT
T ss_pred HccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCC
Confidence 55899999999886 36679999999999 5532 477777776643
No 278
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=71.18 E-value=1.1 Score=38.21 Aligned_cols=50 Identities=14% Similarity=0.341 Sum_probs=37.1
Q ss_pred ccCc-EEEEEcCCChhHH---HHHHHHHHHH-Hh---cCceeeEEEeccCCchhhHHHHh
Q 039432 399 QEGR-NICLYGSENKDWI---IEFNAKMMEI-RR---LGLQVDMVFVGVKNPSEQVRNVL 450 (598)
Q Consensus 399 ~egK-~I~LYgg~d~~Wi---r~FT~~l~~i-~~---~~~~~E~v~Vgkd~~~e~v~~~~ 450 (598)
..|| .+.|||.+ .|| +.+.+.+.++ ++ .+..++++.|+.|+..+.+++.+
T Consensus 23 ~~gk~~vll~F~a--~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~ 80 (143)
T 2lus_A 23 LKDKDIIGFYFSA--HWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYM 80 (143)
Confidence 3688 99999998 565 8888888887 44 24689999999986555554443
No 279
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=67.81 E-value=8.7 Score=30.55 Aligned_cols=44 Identities=2% Similarity=-0.113 Sum_probs=32.7
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
.||.+.++|.++ ..+|+.+.+.+.++ ++.+..+.++.|..++..
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 62 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP 62 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchH
Confidence 578888888875 36679999999998 654445777777776443
No 280
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=67.20 E-value=6.9 Score=34.41 Aligned_cols=50 Identities=10% Similarity=0.059 Sum_probs=37.4
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchhhHHHHhh
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
..||.+.|||.+. ...|+.+.+.+.++ ++ .++++.|+.++..+.+++..+
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~ 100 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLK 100 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHH
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHH
Confidence 4799999999874 35568888888888 54 688899988766666655543
No 281
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=67.15 E-value=8.1 Score=35.27 Aligned_cols=42 Identities=5% Similarity=0.094 Sum_probs=31.8
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKN 441 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~ 441 (598)
.||.+.|+|.+. ..-|+...+.+.++ ++ .+..++++.|+.|+
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~ 91 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQ 91 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCC
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCc
Confidence 799999999883 23347888888888 54 34469999999873
No 282
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=67.08 E-value=4.4 Score=33.00 Aligned_cols=45 Identities=9% Similarity=0.056 Sum_probs=33.4
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
+++||.+.+||.++ ...|+.+.+.+.++ ++.+ .+.++.|.-|...
T Consensus 15 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~ 61 (105)
T 4euy_A 15 IEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQ 61 (105)
T ss_dssp TTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC-
T ss_pred HhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCH
Confidence 45899999999995 25569999999999 6543 5777777776433
No 283
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=66.53 E-value=12 Score=31.95 Aligned_cols=51 Identities=16% Similarity=0.114 Sum_probs=37.4
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCc-hhhHHHHh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNP-SEQVRNVL 450 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~-~e~v~~~~ 450 (598)
.||.+.|+|.+. ...|+...+.+.++ ++ .+..++++.|+.|.. .+.+++..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~ 81 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFF 81 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHH
Confidence 789999998774 35568888888888 54 455799999998865 44444443
No 284
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=66.52 E-value=9.1 Score=30.08 Aligned_cols=46 Identities=4% Similarity=-0.095 Sum_probs=33.9
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
+..||.+.+||.++ ...|+.+.+.+.++ ++.+. +.++.|..++..+
T Consensus 13 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~ 60 (104)
T 2e0q_A 13 LASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPD 60 (104)
T ss_dssp HHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH
T ss_pred HhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHH
Confidence 45789999999885 36679999999999 55332 7788887775433
No 285
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=65.83 E-value=6.7 Score=34.27 Aligned_cols=41 Identities=7% Similarity=0.122 Sum_probs=31.1
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd 440 (598)
.||.+.|+|.+. ..-|+...+.+.++ ++ .+..++++.|+.|
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d 74 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCN 74 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECC
Confidence 799999999883 23358888888888 54 3446999999876
No 286
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=65.66 E-value=8.1 Score=32.98 Aligned_cols=45 Identities=9% Similarity=-0.022 Sum_probs=34.7
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
.||.+.+||.++ ...|+.+.+.+.++ ++.+..+.++.|.-|+..+
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 96 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPE 96 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHH
Confidence 689999999885 35569999999999 6655568888887775443
No 287
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=65.31 E-value=9.6 Score=31.32 Aligned_cols=45 Identities=7% Similarity=-0.048 Sum_probs=33.6
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
..||.+.+||+++ ..+|+.+.+.+.++ ++.+..+.++.|.-+...
T Consensus 28 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 74 (121)
T 2i1u_A 28 SSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNP 74 (121)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH
T ss_pred hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCH
Confidence 4788899999885 36679999999999 654445777777766433
No 288
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=65.30 E-value=9.7 Score=32.70 Aligned_cols=44 Identities=7% Similarity=-0.065 Sum_probs=33.1
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCc
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNP 442 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~ 442 (598)
+.||.+.++|.++ ..+|+.+.+.+.++ ++-+..+.++.|..+..
T Consensus 36 ~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~ 81 (136)
T 2l5l_A 36 EGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKE 81 (136)
T ss_dssp CCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC
T ss_pred cCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCC
Confidence 4678899999885 36679999999999 65444577777777643
No 289
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=65.24 E-value=9.1 Score=33.21 Aligned_cols=47 Identities=13% Similarity=-0.005 Sum_probs=36.2
Q ss_pred cccCcEEEEEcCCCh-hHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 398 VQEGRNICLYGSENK-DWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 398 i~egK~I~LYgg~d~-~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
+..||.+.++|.+++ ..|+.+.+.+.++ +..+..+.++.|..++..+
T Consensus 52 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~ 100 (148)
T 3p2a_A 52 LQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPA 100 (148)
T ss_dssp TTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred HhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHH
Confidence 468999999998853 6679999999999 6655568888887775443
No 290
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=64.56 E-value=10 Score=30.55 Aligned_cols=45 Identities=13% Similarity=0.146 Sum_probs=34.1
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
..+|.+.++|.++ ...|+.+.+.+.++ +..+..+.++.|.-++..
T Consensus 20 ~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~ 66 (111)
T 3gnj_A 20 DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEK 66 (111)
T ss_dssp TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH
T ss_pred hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcCh
Confidence 4789999999885 35679999999999 664446777777777443
No 291
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=64.03 E-value=4.1 Score=34.62 Aligned_cols=41 Identities=10% Similarity=0.031 Sum_probs=32.4
Q ss_pred ccCcEEEEEcCCCh-hHHHHHHHHHH--HH-HhcCceeeEEEecc
Q 039432 399 QEGRNICLYGSENK-DWIIEFNAKMM--EI-RRLGLQVDMVFVGV 439 (598)
Q Consensus 399 ~egK~I~LYgg~d~-~Wir~FT~~l~--~i-~~~~~~~E~v~Vgk 439 (598)
.+||.+.|||++++ .+|+.+.+.+. ++ +..+..+.++.|..
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~ 71 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDV 71 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEEC
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeC
Confidence 47999999999963 66799999998 88 55444688888877
No 292
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=63.99 E-value=9.4 Score=33.02 Aligned_cols=47 Identities=4% Similarity=-0.002 Sum_probs=35.2
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
+..+|.+.++|.++ ...|+.|.+.+.++ +..+..+.++.|.-++..+
T Consensus 21 ~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~ 69 (140)
T 3hz4_A 21 EDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPW 69 (140)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHH
T ss_pred HhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHh
Confidence 34689999999885 36679999999999 6544457778887775444
No 293
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=63.45 E-value=11 Score=34.02 Aligned_cols=41 Identities=5% Similarity=-0.013 Sum_probs=31.0
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd 440 (598)
.||.+.|+|.+. ...|+...+.+.++ ++ .+..++++.|+.|
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 89 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCN 89 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECC
Confidence 799999999883 23457888888888 54 3446999999876
No 294
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=63.28 E-value=8.1 Score=32.39 Aligned_cols=41 Identities=7% Similarity=0.186 Sum_probs=32.6
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEec
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVG 438 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vg 438 (598)
...||.+.++|.++ ..+|+.+.+.+.++ ++.+..+.++.|.
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~ 65 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYAR 65 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEE
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEe
Confidence 45889999999885 36679999999999 6544568888887
No 295
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=63.07 E-value=8.9 Score=32.89 Aligned_cols=44 Identities=7% Similarity=-0.074 Sum_probs=34.1
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCc
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNP 442 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~ 442 (598)
..||.+.++|.++ ..+|+++.+.+.++ ++.+..+.++.|.-++.
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~ 83 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQN 83 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTC
T ss_pred hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCC
Confidence 4789999999885 36679999999999 66444588888877643
No 296
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=62.92 E-value=6 Score=43.25 Aligned_cols=83 Identities=14% Similarity=0.117 Sum_probs=53.3
Q ss_pred CCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcccHHHHHHHHHhhccCCccEEEEeCCCCcee----ch
Q 039432 276 LEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVT----NS 351 (598)
Q Consensus 276 ~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~----~~ 351 (598)
..++|-++...- . + ..-...+..-+..+||.+|++-. .....|.++|++++.|+||+++++|++. ..
T Consensus 155 ~~~~~vallF~~-~-~---s~~~~~~~ldl~~~~~v~v~~v~----~~~~~l~~kfgV~~~Pslvl~~~nGk~~~~~v~~ 225 (519)
T 3t58_A 155 NKADYLALVFER-E-D---SYLGREVTLDLSQYHAVAVRRVL----NTESDLVNKFGVTDFPSCYLLLRNGSVSRVPVLV 225 (519)
T ss_dssp CCCSEEEEEEEC-T-T---CCHHHHHHHHTTTCTTEEEEEEE----TTCHHHHHHHTCCCSSEEEEEETTSCEEECCCSS
T ss_pred CCCCeEEEEecC-C-c---hHHHHHHHHHhhccCCeeEEEec----CchHHHHHHcCCCCCCeEEEEeCCCceeeccccc
Confidence 345666555543 1 0 11235566677899999999843 2234567788999999999999999864 34
Q ss_pred hHHHHHHHhCcCccCCC
Q 039432 352 NALDMVLIWGARGYPFS 368 (598)
Q Consensus 352 nA~~mI~~wG~~AfPFT 368 (598)
+.+..+..| .+.+|..
T Consensus 226 ~~r~~~~~~-l~~l~~~ 241 (519)
T 3t58_A 226 ESRSFYTSY-LRGLPGL 241 (519)
T ss_dssp CSHHHHHHH-HTTSTTC
T ss_pred ccHHHHHHH-HHHccCC
Confidence 455555555 4445543
No 297
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=62.53 E-value=6.4 Score=35.31 Aligned_cols=53 Identities=8% Similarity=0.043 Sum_probs=37.5
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCcee------eEEEeccCC-chhhHHHHhhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQV------DMVFVGVKN-PSEQVRNVLAT 452 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~------E~v~Vgkd~-~~e~v~~~~~~ 452 (598)
.||.+.|+|.+. ...|+...+.+.++ ++ .+..+ +++.|+-|+ ..+.+++..+.
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~ 120 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTD 120 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHH
Confidence 799999999873 24468888888888 43 22235 999999887 66777666543
No 298
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=62.13 E-value=12 Score=29.62 Aligned_cols=43 Identities=16% Similarity=0.152 Sum_probs=31.6
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
.||.+.++|.++ -.+|+.+.+.+.++ ++.+ .+.++.|..++..
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~ 62 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNE 62 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCH
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCH
Confidence 689999988775 46679999999998 5533 5667777666433
No 299
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=61.92 E-value=9.3 Score=32.73 Aligned_cols=50 Identities=12% Similarity=0.116 Sum_probs=37.5
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|+|.+. ...|+.+.+.+.++ ++ ..++++.|+.++..+.+++...
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~ 92 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLG 92 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHH
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHH
Confidence 689888888774 35678888888888 44 4588999998876676665554
No 300
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=61.14 E-value=18 Score=29.19 Aligned_cols=44 Identities=11% Similarity=0.061 Sum_probs=33.2
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
.||.+.++|.++ ..+|+.+.+.+.++ +.-+ .+.++.|..++..+
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~ 70 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKA 70 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHH
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHH
Confidence 589999999886 47789999999999 5533 57777777765443
No 301
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=60.91 E-value=8.3 Score=31.80 Aligned_cols=43 Identities=9% Similarity=-0.012 Sum_probs=32.8
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCc
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNP 442 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~ 442 (598)
.||.+.++|.++ ...|+.+.+.+.++ ++.+..+.++.|.-|+.
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~ 60 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDEN 60 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCC
Confidence 789999999885 35569999999998 65444678888877643
No 302
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=60.81 E-value=13 Score=30.78 Aligned_cols=46 Identities=11% Similarity=-0.067 Sum_probs=34.0
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
..+|.+.++|.++ ...|+.+.+.+.++ +.-+..+.++.|.-++..+
T Consensus 19 ~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 66 (122)
T 3aps_A 19 QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQ 66 (122)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHH
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHH
Confidence 4788999999885 36679999999998 6544367777777765443
No 303
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=60.41 E-value=11 Score=30.59 Aligned_cols=44 Identities=9% Similarity=-0.056 Sum_probs=32.8
Q ss_pred CcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 401 GRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 401 gK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
||.+.++|.++ ..+|+.+.+.+.++ ++-+..+.++.|..+...+
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~ 69 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAA 69 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHH
Confidence 88899999885 36679999999999 6533367788887765433
No 304
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=60.10 E-value=14 Score=31.75 Aligned_cols=52 Identities=8% Similarity=-0.025 Sum_probs=36.7
Q ss_pred cCcEEEEEcCCC-hhHHHHH-HHHHHHH-Hh-cCceeeEEEeccC------CchhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEF-NAKMMEI-RR-LGLQVDMVFVGVK------NPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~F-T~~l~~i-~~-~~~~~E~v~Vgkd------~~~e~v~~~~~ 451 (598)
.||.+.|+|.+. ...|+.. .+.+.++ ++ .+..++++.|+.+ +..+.+++.++
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~ 88 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLH 88 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHH
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHH
Confidence 799999999874 2445886 8888888 54 4457999999863 34555555443
No 305
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=59.56 E-value=18 Score=30.70 Aligned_cols=44 Identities=7% Similarity=-0.034 Sum_probs=32.6
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
.||.+.+||.++ ...|+.+.+.+.++ ++.+ .+.++.|..|...+
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~~ 82 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELKS 82 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSHH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCHH
Confidence 589999999885 35579999999999 5533 57777777664333
No 306
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=59.35 E-value=11 Score=31.52 Aligned_cols=46 Identities=7% Similarity=0.063 Sum_probs=33.3
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
++.||.+.++|.++ ..+|+++.+.+.++ ++.+. +.++.|.-++..+
T Consensus 27 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~ 74 (114)
T 2oe3_A 27 IKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPD 74 (114)
T ss_dssp HHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHH
T ss_pred HhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH
Confidence 45789999999885 36679999999998 55322 7777777664333
No 307
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=59.30 E-value=11 Score=31.18 Aligned_cols=41 Identities=5% Similarity=0.225 Sum_probs=30.3
Q ss_pred cccCcEEEEEcCCCh-hHHHHHHHHHHHH-HhcCceeeEEEeccC
Q 039432 398 VQEGRNICLYGSENK-DWIIEFNAKMMEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 398 i~egK~I~LYgg~d~-~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd 440 (598)
+..||.+.+||++++ .+|+.+.+.+.++ ++.+. .++++..+
T Consensus 26 ~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~~~ 68 (118)
T 1zma_A 26 LDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYFINSE 68 (118)
T ss_dssp HHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC--CCEEEETT
T ss_pred HhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC--eEEEEECC
Confidence 457899999999953 5579999999999 65443 45566544
No 308
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=59.28 E-value=13 Score=32.27 Aligned_cols=41 Identities=10% Similarity=0.080 Sum_probs=30.8
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd 440 (598)
.||.+.|+|.+. ...|+.-.+.+.++ ++ .+..++++.|+.|
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d 73 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCN 73 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 799999999883 23347778888888 54 3446999999976
No 309
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=58.62 E-value=14 Score=30.56 Aligned_cols=43 Identities=5% Similarity=-0.017 Sum_probs=31.7
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
.||.+.++|.++ ..+|+++.+.+.++ ++-+. +.++.|..|+..
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~ 77 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELK 77 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCH
Confidence 588899999885 36679999999999 55322 777777776433
No 310
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=58.52 E-value=12 Score=30.52 Aligned_cols=26 Identities=8% Similarity=0.118 Sum_probs=19.2
Q ss_pred HHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 322 AVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 322 ~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+..+.+.+.+++++.|++++ +|+.+.
T Consensus 55 ~~~~~l~~~~g~~~vP~i~~---~g~~i~ 80 (105)
T 1kte_A 55 EIQDYLQQLTGARTVPRVFI---GKECIG 80 (105)
T ss_dssp HHHHHHHHHHSCCCSCEEEE---TTEEEE
T ss_pred HHHHHHHHHhCCCCcCeEEE---CCEEEe
Confidence 44566778889999999865 577663
No 311
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=57.91 E-value=5.7 Score=36.76 Aligned_cols=48 Identities=15% Similarity=0.038 Sum_probs=35.7
Q ss_pred cCcEEEEEcCCCh-hHHHHHHHHHHHH-HhcCceeeEEEeccCCchhhHHH
Q 039432 400 EGRNICLYGSENK-DWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSEQVRN 448 (598)
Q Consensus 400 egK~I~LYgg~d~-~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e~v~~ 448 (598)
.||.+.++|++++ ..|+.+.|.+.++ ++.+ .++++.|..|...+.+++
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~~~~~~ 102 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAEDDLRQ 102 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHHHHTTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCHHHHHH
Confidence 6899999999942 4459999999999 5533 688888887755555443
No 312
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=57.75 E-value=17 Score=28.94 Aligned_cols=44 Identities=9% Similarity=0.006 Sum_probs=32.1
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
.||.+.+||.++ ...|+.+.+.+.++ ++-+ .+.++.|..++..+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~ 64 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS-NVIFLEVDVDDCQD 64 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHST-TSEEEEEETTTCHH
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHcc-CeEEEEEEhhhhHH
Confidence 689999999885 35569999999999 5422 27777777764433
No 313
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=57.39 E-value=16 Score=30.70 Aligned_cols=43 Identities=12% Similarity=-0.041 Sum_probs=31.6
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCC
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKN 441 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~ 441 (598)
..||.+.|+|.+. ...|+.+.+.+.++ ++-+..+.++.|..+.
T Consensus 27 ~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~ 71 (148)
T 2b5x_A 27 IGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPR 71 (148)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCC
T ss_pred cCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCC
Confidence 3788888888774 35569999999888 5433238888888764
No 314
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=56.88 E-value=6.6 Score=35.83 Aligned_cols=39 Identities=5% Similarity=0.038 Sum_probs=31.4
Q ss_pred cCcEEEEEcCCChhHH---HHHHHHHHHH-Hh-cCceeeEEEeccC
Q 039432 400 EGRNICLYGSENKDWI---IEFNAKMMEI-RR-LGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~d~~Wi---r~FT~~l~~i-~~-~~~~~E~v~Vgkd 440 (598)
.||.+.|+|.+ .|| +...+.+.++ ++ .+..++++.|+.|
T Consensus 45 ~Gk~vlv~F~a--twC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d 88 (187)
T 3dwv_A 45 KGSPLLIYNVA--SKCGYTKGGYETATTLYNKYKSQGFTVLAFPSN 88 (187)
T ss_dssp TTSCEEEEEEC--CBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBC
T ss_pred CCCEEEEEEec--CCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECc
Confidence 79999999988 555 8888888888 54 4446999999876
No 315
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.81 E-value=14 Score=30.92 Aligned_cols=44 Identities=5% Similarity=-0.108 Sum_probs=32.5
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcC----ceeeEEEeccCCc
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLG----LQVDMVFVGVKNP 442 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~----~~~E~v~Vgkd~~ 442 (598)
..+|.+.++|.++ ..+|+.+.+.+.++ ++.+ ..+.++.|..+..
T Consensus 23 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 72 (133)
T 1x5d_A 23 DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVN 72 (133)
T ss_dssp TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTC
T ss_pred cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCC
Confidence 4689999999885 36679999999888 5422 4577788777643
No 316
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=56.69 E-value=9.4 Score=32.90 Aligned_cols=67 Identities=9% Similarity=0.113 Sum_probs=40.3
Q ss_pred EEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcccHHHHH
Q 039432 246 ILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLNSAVVN 325 (598)
Q Consensus 246 lLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~~~~~r 325 (598)
..+|++.|||.|... |.++.+++. ..+.++..|.+ |.+.. ..+..+
T Consensus 27 Vvvf~~~~Cp~C~~a---lk~~L~~~~----~~~i~~~~vdi-------d~~~~--------------------~~~~~~ 72 (118)
T 3c1r_A 27 IFVASKTYCPYCHAA---LNTLFEKLK----VPRSKVLVLQL-------NDMKE--------------------GADIQA 72 (118)
T ss_dssp EEEEECSSCHHHHHH---HHHHHTTSC----CCGGGEEEEEG-------GGSTT--------------------HHHHHH
T ss_pred EEEEEcCCCcCHHHH---HHHHHHHcC----CCCCCeEEEEC-------ccCCC--------------------hHHHHH
Confidence 446888997555544 244555542 12355566777 32211 124566
Q ss_pred HHHHhhccCCccEEEEeCCCCcee
Q 039432 326 LIKQEWNFKEEPIMVVLDSQGMVT 349 (598)
Q Consensus 326 ~ike~~~~~~iP~LVvL~pqGkv~ 349 (598)
.+++.++.++.|.+.+ +|+.+
T Consensus 73 ~l~~~~g~~tvP~vfi---~g~~i 93 (118)
T 3c1r_A 73 ALYEINGQRTVPNIYI---NGKHI 93 (118)
T ss_dssp HHHHHHSCCSSCEEEE---TTEEE
T ss_pred HHHHHhCCCCcCEEEE---CCEEE
Confidence 7888889999998855 66665
No 317
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=55.90 E-value=21 Score=30.71 Aligned_cols=68 Identities=6% Similarity=-0.027 Sum_probs=40.7
Q ss_pred CcEEEEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCCcccH
Q 039432 242 DKVVILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQLLNS 321 (598)
Q Consensus 242 gK~VlLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~~i~~ 321 (598)
++.|+++|.+.+ .+|+.+...|.++=++ .++++.+++|-+ |+. +.
T Consensus 23 ~~pv~v~f~a~~-~~c~~~~p~l~~~A~~-----~~gk~~f~~vd~-------d~~------------------~~---- 67 (133)
T 2djk_A 23 GIPLAYIFAETA-EERKELSDKLKPIAEA-----QRGVINFGTIDA-------KAF------------------GA---- 67 (133)
T ss_dssp TSCEEEEECSCS-SSHHHHHHHHHHHHHS-----STTTSEEEEECT-------TTT------------------GG----
T ss_pred CCCEEEEEecCh-hhHHHHHHHHHHHHHH-----hCCeEEEEEEch-------HHh------------------HH----
Confidence 467888888885 4444332225555433 234566777665 211 11
Q ss_pred HHHHHHHHhhccCC--ccEEEEeCC-CCcee
Q 039432 322 AVVNLIKQEWNFKE--EPIMVVLDS-QGMVT 349 (598)
Q Consensus 322 ~~~r~ike~~~~~~--iP~LVvL~p-qGkv~ 349 (598)
+.+.|++++ +|+|++++. +|+..
T Consensus 68 -----~a~~~gi~~~~iPtl~i~~~~~g~~~ 93 (133)
T 2djk_A 68 -----HAGNLNLKTDKFPAFAIQEVAKNQKF 93 (133)
T ss_dssp -----GTTTTTCCSSSSSEEEEECTTTCCBC
T ss_pred -----HHHHcCCCcccCCEEEEEecCcCccc
Confidence 335678888 999999984 67654
No 318
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=55.84 E-value=12 Score=33.22 Aligned_cols=46 Identities=9% Similarity=0.140 Sum_probs=34.1
Q ss_pred ccCcEEEEEcCCCh-hHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 399 QEGRNICLYGSENK-DWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 399 ~egK~I~LYgg~d~-~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
.+||.+.++|.+++ ..|+.+.+.+.++ ++-+..+.++.|.-|...+
T Consensus 21 ~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~ 68 (149)
T 3gix_A 21 TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAV 68 (149)
T ss_dssp CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCH
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHH
Confidence 46999999999942 4459999999999 6544457778887764433
No 319
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=55.58 E-value=15 Score=31.35 Aligned_cols=51 Identities=14% Similarity=0.098 Sum_probs=35.1
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccC-CchhhHHHHh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVK-NPSEQVRNVL 450 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd-~~~e~v~~~~ 450 (598)
.||.+.|+|.+. ...|+...+.+.++ ++ .+..+.++.|+.+ ++.+.+++..
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~ 81 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYV 81 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHH
Confidence 789999999773 24468888999888 54 3446888888854 3444444443
No 320
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=55.36 E-value=25 Score=31.35 Aligned_cols=52 Identities=12% Similarity=0.125 Sum_probs=37.7
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCc-hhhHHHHhh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNP-SEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~-~e~v~~~~~ 451 (598)
.||.+.|+|.+. ...|+...+.+.++ ++ .+..++++.|+.|.. .+.+++..+
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~ 114 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLK 114 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHH
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHH
Confidence 799999999874 35568888888888 54 346799999998853 345554443
No 321
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=60.31 E-value=2.5 Score=36.97 Aligned_cols=51 Identities=12% Similarity=0.069 Sum_probs=36.1
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHH-H-Hh-c-CceeeEEEeccCCchhhHHHHh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMME-I-RR-L-GLQVDMVFVGVKNPSEQVRNVL 450 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~-i-~~-~-~~~~E~v~Vgkd~~~e~v~~~~ 450 (598)
.||.+.|+|.+. ...|+...+.+.+ + ++ . +..++++.|+.|+..+.+++..
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~ 87 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFA 87 (159)
Confidence 789999999883 2334777888877 6 43 3 5689999999886655554433
No 322
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=54.72 E-value=13 Score=31.62 Aligned_cols=44 Identities=9% Similarity=0.046 Sum_probs=32.2
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh---cCceeeEEEeccCC
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RR---LGLQVDMVFVGVKN 441 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~---~~~~~E~v~Vgkd~ 441 (598)
+..||.+.+||.++ ...|+++.+.+.++ +. .+..+.++.|.-++
T Consensus 31 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~ 79 (140)
T 2dj1_A 31 VADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS 79 (140)
T ss_dssp HTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT
T ss_pred HhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc
Confidence 56789999999985 35579999999888 54 23347777776664
No 323
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=54.23 E-value=19 Score=38.69 Aligned_cols=71 Identities=8% Similarity=-0.064 Sum_probs=44.5
Q ss_pred ceecCcEEEEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCCCCCCChHhHHHHHHhhcCCCeeeeecCC
Q 039432 238 SELKDKVVILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISSSETWTDVEERNFELFSCSLPWYSVRQPQ 317 (598)
Q Consensus 238 s~L~gK~VlLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~~~~W~D~de~~Fe~~~~~MPWyAVp~~~ 317 (598)
..+.++.+...|++.||++|..+.+.|.++=.+. .+.++.-|-+ |+
T Consensus 113 ~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~------~~v~~~~vd~-------~~--------------------- 158 (521)
T 1hyu_A 113 RDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLN------PRIKHTAIDG-------GT--------------------- 158 (521)
T ss_dssp HHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHC------TTEEEEEEET-------TT---------------------
T ss_pred HhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHc------CceEEEEEec-------hh---------------------
Confidence 3456888899999999866655433255543221 1344444433 21
Q ss_pred cccHHHHHHHHHhhccCCccEEEEeCCCCceech
Q 039432 318 LLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNS 351 (598)
Q Consensus 318 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 351 (598)
...+.++++++++|++++ +|+.+..
T Consensus 159 ------~~~~~~~~~i~svPt~~i---~g~~~~~ 183 (521)
T 1hyu_A 159 ------FQNEITERNVMGVPAVFV---NGKEFGQ 183 (521)
T ss_dssp ------CHHHHHHTTCCSSSEEEE---TTEEEEE
T ss_pred ------hHHHHHHhCCCccCEEEE---CCEEEec
Confidence 112566779999999988 8888743
No 324
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=53.69 E-value=17 Score=30.23 Aligned_cols=44 Identities=9% Similarity=-0.027 Sum_probs=32.5
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
.||.+.++|.++ ...|+.+.+.+.++ ++-+. +.++.|.-|+..+
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~ 75 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQD 75 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH
Confidence 799999999885 25569999999999 54322 7777777764333
No 325
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=52.87 E-value=17 Score=29.47 Aligned_cols=41 Identities=10% Similarity=0.042 Sum_probs=30.4
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKN 441 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~ 441 (598)
.||.+.++|.++ ..+|+++.+.+.++ ++.+ .+.++.|..++
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~ 69 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDE 69 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEccc
Confidence 488899988885 36679999999999 5533 56667776664
No 326
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=52.77 E-value=9.2 Score=32.13 Aligned_cols=47 Identities=13% Similarity=0.009 Sum_probs=34.3
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchh
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e 444 (598)
+..||.+.+||.++ ..+|+.+.+.+.++ +. .+..+.++.|.-|+..+
T Consensus 30 l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~ 79 (121)
T 2j23_A 30 TGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQ 79 (121)
T ss_dssp HSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHH
T ss_pred HcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHH
Confidence 56899999999885 36679999999998 44 22247888887775433
No 327
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=52.52 E-value=20 Score=30.06 Aligned_cols=42 Identities=10% Similarity=-0.059 Sum_probs=31.7
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCC
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKN 441 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~ 441 (598)
+.||.+.++|.++ ..+|+.+.+.+.++ ++. ..+.++.|.-+.
T Consensus 21 ~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~ 64 (118)
T 2f51_A 21 EAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDK 64 (118)
T ss_dssp HCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCC
Confidence 3689999999885 36679999999999 554 456777777664
No 328
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=52.14 E-value=12 Score=33.06 Aligned_cols=42 Identities=10% Similarity=0.147 Sum_probs=32.6
Q ss_pred cCcEEEEEcCCCh-hHHHHHHHHHHHH-HhcCceeeEEEeccCC
Q 039432 400 EGRNICLYGSENK-DWIIEFNAKMMEI-RRLGLQVDMVFVGVKN 441 (598)
Q Consensus 400 egK~I~LYgg~d~-~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~ 441 (598)
.||.+.++|.+++ ..|+.+.+.+.++ ++.+..+.++.|.-|.
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~ 65 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITE 65 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEcccc
Confidence 5899999999952 5569999999999 6644457788877664
No 329
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=51.67 E-value=14 Score=30.02 Aligned_cols=44 Identities=14% Similarity=0.130 Sum_probs=30.8
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCch
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPS 443 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~ 443 (598)
.||.+.++|.++ ...|+.+.+.+.++ ++ ....+.++.|.-+...
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 66 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENS 66 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCH
Confidence 489999999884 24469999999999 54 1334777777766433
No 330
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=50.56 E-value=23 Score=28.53 Aligned_cols=43 Identities=9% Similarity=-0.010 Sum_probs=31.6
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCc
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNP 442 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~ 442 (598)
..||.+.++|.++ ..+|+.+.+.+.++ ++.+ .+.++.|.-++.
T Consensus 19 ~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~ 63 (107)
T 1gh2_A 19 AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP-QAVFLEVDVHQC 63 (107)
T ss_dssp TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTS
T ss_pred CCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC-CcEEEEEECccC
Confidence 4789999999886 36679999999999 5532 466666666643
No 331
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=50.47 E-value=24 Score=31.93 Aligned_cols=41 Identities=5% Similarity=0.001 Sum_probs=30.4
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd 440 (598)
.||.+.|+|.+. ...|+.-.+.+.++ ++ ++..++++.|+.|
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d 91 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCN 91 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECc
Confidence 789999999873 23347777888888 44 3446999999876
No 332
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=50.24 E-value=4.6 Score=40.02 Aligned_cols=28 Identities=18% Similarity=0.248 Sum_probs=17.5
Q ss_pred CCCcccccccCC-CCCc---cceeecCCCCccc
Q 039432 563 EPCSHPNVLHYA-EGSR---EGIVVCEKCKRLL 591 (598)
Q Consensus 563 ~~C~~~~~~p~~-~g~i---p~~i~CpeC~R~M 591 (598)
+.-|| +.||.. -..| .+.+.||+|||.+
T Consensus 201 C~GC~-~~lppq~~~~i~~~~~Iv~Cp~CgRIL 232 (256)
T 3na7_A 201 CGGCF-IRLNDKIYTEVLTSGDMITCPYCGRIL 232 (256)
T ss_dssp CTTTC-CBCCHHHHHHHHHSSSCEECTTTCCEE
T ss_pred cCCCC-eeeCHHHHHHHHCCCCEEECCCCCeeE
Confidence 34467 777721 1111 2569999999986
No 333
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=49.72 E-value=15 Score=32.34 Aligned_cols=50 Identities=12% Similarity=0.068 Sum_probs=34.4
Q ss_pred cCcE-EEEEcC-CC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHh
Q 039432 400 EGRN-ICLYGS-EN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVL 450 (598)
Q Consensus 400 egK~-I~LYgg-~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~ 450 (598)
.||. +.|+|. +. ..-|+...+.+.++ ++ .+..++++.|+.|+ .+.+++..
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~-~~~~~~~~ 81 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDD-INSHKRFK 81 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCC-HHHHHHHH
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCC-HHHHHHHH
Confidence 6887 888886 62 34467888888887 44 44569999999985 44444444
No 334
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=49.29 E-value=22 Score=32.14 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=36.6
Q ss_pred cCcEEEEEcCCC--hhHHHHHHHHHHHH-H---hcCceeeEEEeccCC---chhhHHHHhh
Q 039432 400 EGRNICLYGSEN--KDWIIEFNAKMMEI-R---RLGLQVDMVFVGVKN---PSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg~d--~~Wir~FT~~l~~i-~---~~~~~~E~v~Vgkd~---~~e~v~~~~~ 451 (598)
.||.+.|||+.- ..||..-++.+.++ + +.+..+.+++|+-|- .-|++++-.+
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~ 91 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQ 91 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHT
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHH
Confidence 899999999854 26887777777666 3 357789999999763 2345554443
No 335
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=49.27 E-value=10 Score=31.72 Aligned_cols=46 Identities=9% Similarity=-0.115 Sum_probs=32.9
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
..+|.+.++|.++ ...|+.+.+.+.++ ++.+..+.++.|..+...+
T Consensus 33 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 80 (130)
T 2dml_A 33 QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQS 80 (130)
T ss_dssp TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHH
T ss_pred cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHH
Confidence 4688999999884 24459999999999 6544347777777665443
No 336
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=48.57 E-value=15 Score=32.52 Aligned_cols=43 Identities=23% Similarity=0.402 Sum_probs=32.3
Q ss_pred ccCcEEEEEc-CCC-hhHHHHHHHHH---HHH-HhcCceeeEEEeccCC
Q 039432 399 QEGRNICLYG-SEN-KDWIIEFNAKM---MEI-RRLGLQVDMVFVGVKN 441 (598)
Q Consensus 399 ~egK~I~LYg-g~d-~~Wir~FT~~l---~~i-~~~~~~~E~v~Vgkd~ 441 (598)
.+||.+.||| |++ ..+|+.+.+.+ .++ +..+..+.++.|..++
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~ 93 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQ 93 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCS
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCcc
Confidence 4799999999 575 46679999988 777 5445677888777664
No 337
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=47.54 E-value=22 Score=30.14 Aligned_cols=43 Identities=12% Similarity=0.098 Sum_probs=31.8
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
.||.+.++|.++ ..+|+.+.+.+.++ ++.+ .+.++.|..|...
T Consensus 45 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~ 89 (139)
T 3d22_A 45 DGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELS 89 (139)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccH
Confidence 689999999885 35679999999999 5532 4677777766433
No 338
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=47.27 E-value=24 Score=29.04 Aligned_cols=42 Identities=10% Similarity=-0.009 Sum_probs=31.1
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
.||.+.++|.++ ..+|+.+.+.+.++ ++. .+.++.|.-+...
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~ 75 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLE 75 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccH
Confidence 789999999885 36679999999988 544 5666777666433
No 339
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=47.11 E-value=22 Score=32.51 Aligned_cols=48 Identities=8% Similarity=-0.010 Sum_probs=35.3
Q ss_pred cCcEEEEEcC-CChhHH---HHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHh
Q 039432 400 EGRNICLYGS-ENKDWI---IEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVL 450 (598)
Q Consensus 400 egK~I~LYgg-~d~~Wi---r~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~ 450 (598)
.||.+.|||. + .|| +...+.+.++ ++ .+..++++.|+.|. .+.+++..
T Consensus 44 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~-~~~~~~~~ 97 (195)
T 2bmx_A 44 PGKWRVVFFWPK--DFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDS-EFAHFQWR 97 (195)
T ss_dssp TTCEEEEEECSC--TTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSC-HHHHHHHH
T ss_pred CCCcEEEEEEcC--CCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCC-HHHHHHHH
Confidence 6899999998 7 565 8888888888 44 34479999999985 34444433
No 340
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=47.08 E-value=17 Score=32.45 Aligned_cols=45 Identities=7% Similarity=-0.065 Sum_probs=33.7
Q ss_pred cccCcEEEEEcCCCh-hHHHHHHHHHHHH-HhcCceeeEEEeccCCc
Q 039432 398 VQEGRNICLYGSENK-DWIIEFNAKMMEI-RRLGLQVDMVFVGVKNP 442 (598)
Q Consensus 398 i~egK~I~LYgg~d~-~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~ 442 (598)
+..||.+.+||.+++ ..|+.|.+.+.++ ++-...+.++.|.-++.
T Consensus 61 ~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~ 107 (155)
T 2ppt_A 61 ERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAH 107 (155)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTS
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCcc
Confidence 467899999998853 4569999999999 65343577777777643
No 341
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=45.86 E-value=16 Score=32.91 Aligned_cols=26 Identities=12% Similarity=0.144 Sum_probs=20.0
Q ss_pred HHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 322 AVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 322 ~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+..+.|.+.++++++|++++ +|+.+.
T Consensus 89 ~~~~~L~~~~g~~tvP~ifi---~G~~ig 114 (146)
T 2ht9_A 89 QFQDALYKMTGERTVPRIFV---NGTFIG 114 (146)
T ss_dssp HHHHHHHHHHSCCCSCEEEE---TTEEEE
T ss_pred HHHHHHHHHhCCCCcCeEEE---CCEEEe
Confidence 44567888889999999865 677764
No 342
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=45.67 E-value=19 Score=31.31 Aligned_cols=42 Identities=10% Similarity=0.040 Sum_probs=32.6
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKN 441 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~ 441 (598)
.||.+.|||.+. ...|+...+.+.++ ++ .+..++++.|+.|.
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 84 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK 84 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH
Confidence 789999999873 34468888888888 54 44679999998874
No 343
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=44.30 E-value=1.1e+02 Score=29.22 Aligned_cols=26 Identities=8% Similarity=-0.273 Sum_probs=18.8
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI 425 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i 425 (598)
.|+..++.|.+. ...|++..+.+.++
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~l 163 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMF 163 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHH
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHH
Confidence 577767766553 45579999998888
No 344
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=44.23 E-value=24 Score=30.46 Aligned_cols=43 Identities=14% Similarity=0.107 Sum_probs=31.0
Q ss_pred cCcEEEEEcCCC-hhH-HHHHHHHHHHH-Hh-cC----ceeeEEEeccCCc
Q 039432 400 EGRNICLYGSEN-KDW-IIEFNAKMMEI-RR-LG----LQVDMVFVGVKNP 442 (598)
Q Consensus 400 egK~I~LYgg~d-~~W-ir~FT~~l~~i-~~-~~----~~~E~v~Vgkd~~ 442 (598)
.||.+.|||... ... |+...+.+.++ ++ .+ ..++++.|+.|..
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~ 72 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPE 72 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTT
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCC
Confidence 799999999883 233 56677777777 43 11 4899999998753
No 345
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=43.85 E-value=23 Score=29.12 Aligned_cols=42 Identities=12% Similarity=0.070 Sum_probs=30.0
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccC
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd 440 (598)
+.++|.+.++|.++ ..+|+.+.+.+.++ ++.+ .+.++.|..+
T Consensus 16 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~ 59 (110)
T 2l6c_A 16 FEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSE 59 (110)
T ss_dssp HTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGG
T ss_pred HHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCc
Confidence 45778888888885 36679999999998 4422 4566666555
No 346
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=43.48 E-value=18 Score=32.50 Aligned_cols=41 Identities=12% Similarity=0.123 Sum_probs=30.8
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKN 441 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~ 441 (598)
.||.+.|+|.+. ...|+...+.+.++ ++ .+. ++++.|+.|.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~ 75 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINAND 75 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCc
Confidence 789999999873 24457788888888 54 334 9999999853
No 347
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=43.36 E-value=13 Score=32.53 Aligned_cols=49 Identities=12% Similarity=0.148 Sum_probs=34.4
Q ss_pred cCcEEEEEcCCChhHH----HHHHHHHHHH-Hh---cCceeeEEEeccC---CchhhHHHHh
Q 039432 400 EGRNICLYGSENKDWI----IEFNAKMMEI-RR---LGLQVDMVFVGVK---NPSEQVRNVL 450 (598)
Q Consensus 400 egK~I~LYgg~d~~Wi----r~FT~~l~~i-~~---~~~~~E~v~Vgkd---~~~e~v~~~~ 450 (598)
.||.+.|+|.+ .|| +...+.+.++ ++ .+..++++.|+.| +..+.+++..
T Consensus 32 ~gk~vll~f~~--~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~ 91 (174)
T 1xzo_A 32 KGEVWLADFIF--TNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFA 91 (174)
T ss_dssp TTCCEEEEEEC--SCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHH
T ss_pred CCCEEEEEEEc--CCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHH
Confidence 79999999987 554 6667777777 43 3346999999988 3445555544
No 348
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=43.16 E-value=27 Score=31.85 Aligned_cols=52 Identities=12% Similarity=-0.017 Sum_probs=35.9
Q ss_pred cCcEEEEEcC-CC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHhhh
Q 039432 400 EGRNICLYGS-EN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVLAT 452 (598)
Q Consensus 400 egK~I~LYgg-~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~~ 452 (598)
.||.+.|+|. ++ ..-|+...+.+.++ ++ ++..++++.|+.|.+ +.+++.++.
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~-~~~~~~~~~ 88 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQ-FTHLAWINT 88 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHHHTS
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHHHH
Confidence 7899999998 73 24457777888777 43 445799999999853 334444433
No 349
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.03 E-value=69 Score=27.73 Aligned_cols=26 Identities=12% Similarity=0.144 Sum_probs=19.9
Q ss_pred HHHHHHHHhhccCCccEEEEeCCCCceec
Q 039432 322 AVVNLIKQEWNFKEEPIMVVLDSQGMVTN 350 (598)
Q Consensus 322 ~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 350 (598)
+..+.+.+.+++++.|++++ +|+.+.
T Consensus 67 ~~~~~l~~~~g~~~vP~l~i---~G~~ig 92 (130)
T 2cq9_A 67 QFQDALYKMTGERTVPRIFV---NGTFIG 92 (130)
T ss_dssp HHHHHHHHHHSSCCSSEEEE---TTEEEE
T ss_pred HHHHHHHHHhCCCCcCEEEE---CCEEEc
Confidence 34567788889999999865 677764
No 350
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=42.77 E-value=31 Score=29.86 Aligned_cols=50 Identities=10% Similarity=-0.031 Sum_probs=34.2
Q ss_pred cCc-EEEEEc-CCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHh
Q 039432 400 EGR-NICLYG-SEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVL 450 (598)
Q Consensus 400 egK-~I~LYg-g~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~ 450 (598)
.|| .+.|+| ++. ..-|+...+.+.++ ++ .+..++++.|+.|++ +.+++..
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~-~~~~~~~ 88 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPP-PTHKIWA 88 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCH-HHHHHHH
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCH-HHHHHHH
Confidence 677 888888 362 34468888888888 54 345799999999853 4444433
No 351
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=42.71 E-value=25 Score=30.01 Aligned_cols=45 Identities=16% Similarity=0.034 Sum_probs=33.1
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
+..||.+.++|.++ ...|+.+.+.+.++ ++.+ .+.++.|.-+...
T Consensus 34 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~ 80 (125)
T 1r26_A 34 MSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNS 80 (125)
T ss_dssp HHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCH
T ss_pred HccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCH
Confidence 45889999999885 35679999999999 5532 4677777766433
No 352
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=42.64 E-value=53 Score=24.50 Aligned_cols=16 Identities=19% Similarity=0.462 Sum_probs=12.1
Q ss_pred hhccCCccEEEEeCCCCce
Q 039432 330 EWNFKEEPIMVVLDSQGMV 348 (598)
Q Consensus 330 ~~~~~~iP~LVvL~pqGkv 348 (598)
.+++.+.|++++ +|++
T Consensus 45 ~~~~~~vP~l~~---~g~~ 60 (75)
T 1r7h_A 45 ALGYVQAPVVEV---DGEH 60 (75)
T ss_dssp HTTCBCCCEEEE---TTEE
T ss_pred HcCCCccCEEEE---CCeE
Confidence 478889999984 5664
No 353
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=42.53 E-value=28 Score=32.60 Aligned_cols=48 Identities=6% Similarity=-0.060 Sum_probs=35.6
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchhh
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSEQ 445 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e~ 445 (598)
+..||.+.|+|.++ ...|+.+.+.+.++ +..+..+.++.|.-+...+.
T Consensus 27 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l 76 (222)
T 3dxb_A 27 LKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 76 (222)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTT
T ss_pred HhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHH
Confidence 34789999999885 25569999999999 66444577788877754443
No 354
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=42.40 E-value=30 Score=28.92 Aligned_cols=44 Identities=11% Similarity=0.061 Sum_probs=30.6
Q ss_pred cCcEEEEEcCCCh-hHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 400 EGRNICLYGSENK-DWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 400 egK~I~LYgg~d~-~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
.+|.+.++|.+++ ..|+.+.+.+.++ +..+ .+..+.|.-|...+
T Consensus 19 ~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d~~~~ 64 (105)
T 3zzx_A 19 GNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVDECED 64 (105)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETTTCHH
T ss_pred CCCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecccCHH
Confidence 5799999999952 5569999999999 5422 34556666554333
No 355
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=42.03 E-value=44 Score=28.05 Aligned_cols=41 Identities=12% Similarity=0.151 Sum_probs=30.4
Q ss_pred cCcEEEEEcCCC-------h-hHHHHHHHHHHHH-HhcCceeeEEEeccC
Q 039432 400 EGRNICLYGSEN-------K-DWIIEFNAKMMEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~d-------~-~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd 440 (598)
.||.+.++|.++ + ..|+.+.+.+.++ ++.+..+.++.|.-+
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~ 72 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVG 72 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECC
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECC
Confidence 389999999884 2 4459999999999 664446777777663
No 356
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=41.93 E-value=80 Score=28.39 Aligned_cols=94 Identities=12% Similarity=0.168 Sum_probs=49.2
Q ss_pred ecCcEEEEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEcCC--CCC---------CChHhHH-HHHHhh--
Q 039432 240 LKDKVVILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPISS--SET---------WTDVEER-NFELFS-- 305 (598)
Q Consensus 240 L~gK~VlLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpid~--~~~---------W~D~de~-~Fe~~~-- 305 (598)
=.+|.++..|++.+||-|..+...| +++ ++..|+|+.... ..+ |.-.++. .|++++
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l----~~l------~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~ 81 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEF----EKM------TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRK 81 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHH----TTC------CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCChhHHHHHHHH----hhc------CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhC
Confidence 4679999999999975444333313 333 246677664411 111 1111222 233322
Q ss_pred cCCCeeeeecCC-cccHHHHHHHHHhhccCCccEEEEeCCCCce
Q 039432 306 CSLPWYSVRQPQ-LLNSAVVNLIKQEWNFKEEPIMVVLDSQGMV 348 (598)
Q Consensus 306 ~~MPWyAVp~~~-~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv 348 (598)
...|= ..++ .-....-..+.+.+++++.|++++ .+|+.
T Consensus 82 g~~~~---~~~~~~~~v~~~~~la~~~gI~gtPt~vi--~nG~~ 120 (147)
T 3gv1_A 82 GKFPV---GGSICDNPVAETTSLGEQFGFNGTPTLVF--PNGRT 120 (147)
T ss_dssp CCCCT---TCCCCSCSHHHHHHHHHHTTCCSSCEEEC--TTSCE
T ss_pred CCCCC---ccHHHHHHHHHHHHHHHHhCCCccCEEEE--ECCEE
Confidence 22220 0111 001233456778999999999998 46764
No 357
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=41.78 E-value=31 Score=29.67 Aligned_cols=42 Identities=2% Similarity=-0.113 Sum_probs=32.1
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccC
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVK 440 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd 440 (598)
..||.+.|+|.+. ...|+.+.+.+.++ ++ .+..++++.|+.+
T Consensus 36 ~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~ 80 (164)
T 2h30_A 36 KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASP 80 (164)
T ss_dssp CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECT
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcC
Confidence 4789999999884 24568888999888 43 3456899999865
No 358
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=41.78 E-value=20 Score=31.28 Aligned_cols=42 Identities=14% Similarity=0.109 Sum_probs=30.5
Q ss_pred cCcEEEEEcCCC-hhH-HHHHHHHHHHH-HhcC----ceeeEEEeccCC
Q 039432 400 EGRNICLYGSEN-KDW-IIEFNAKMMEI-RRLG----LQVDMVFVGVKN 441 (598)
Q Consensus 400 egK~I~LYgg~d-~~W-ir~FT~~l~~i-~~~~----~~~E~v~Vgkd~ 441 (598)
.||.+.|||.+. ... |+...+.+.++ ++-+ ..++++.|+.|.
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~ 82 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDP 82 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCT
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECC
Confidence 799999999883 232 57777777777 4422 369999999763
No 359
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=41.30 E-value=23 Score=31.51 Aligned_cols=56 Identities=5% Similarity=-0.107 Sum_probs=37.3
Q ss_pred cccCCceeecceecCcEEEEEEecCCCCCh-hhhhHHHHHHhcCcCCCCCCCCeEEEEEEc
Q 039432 228 IAMKSEQLGVSELKDKVVILLVSKPELLPL-EKLFLLVHQTYDHPHNKNLEESYKIVWVPI 287 (598)
Q Consensus 228 ~~~~~~kV~Is~L~gK~VlLyfSal~~~~~-~~~~~~L~~iY~~l~~~~~~~~fEIVwIpi 287 (598)
+.+.++.+.+..-.+|.+...|++.+||.| .+-+. +.++.+++. ..++.+++|.++
T Consensus 13 ~~~~~~~~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~-~~~~~~~~~---~~~~v~~~~~~~ 69 (175)
T 1z6m_A 13 KVNTETGLHIGESNAPVKMIEFINVRCPYCRKWFEE-SEELLAQSV---KSGKVERIIKLF 69 (175)
T ss_dssp GCCSSSSEEESCTTCSEEEEEEECTTCHHHHHHHHH-HHHHHHHHH---HTTSEEEEEEEC
T ss_pred ccCCCCCcccCCCCCCeEEEEEECCCCcchHHHHHH-HHHHHHHHh---hCCcEEEEEEeC
Confidence 334555555666688999999999998544 44444 666655541 134688999887
No 360
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=40.91 E-value=35 Score=29.67 Aligned_cols=51 Identities=20% Similarity=0.191 Sum_probs=35.3
Q ss_pred cCcEEEEEcCCC-hhH-HHHHHHHHHHH-Hhc-----CceeeEEEeccCC---chhhHHHHh
Q 039432 400 EGRNICLYGSEN-KDW-IIEFNAKMMEI-RRL-----GLQVDMVFVGVKN---PSEQVRNVL 450 (598)
Q Consensus 400 egK~I~LYgg~d-~~W-ir~FT~~l~~i-~~~-----~~~~E~v~Vgkd~---~~e~v~~~~ 450 (598)
.||.+.|||.+. ... |+...+.+.++ ++- +..++++.|+.|. ..+.+++..
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~ 86 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYV 86 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHH
Confidence 799999999883 233 67777888887 432 2589999999873 334444444
No 361
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=40.37 E-value=31 Score=31.32 Aligned_cols=42 Identities=14% Similarity=0.003 Sum_probs=31.2
Q ss_pred ecCcEEEEEEecCCCCCh-hhhhHHHHHHhcCcCCCCCCCCeEEEEEEc
Q 039432 240 LKDKVVILLVSKPELLPL-EKLFLLVHQTYDHPHNKNLEESYKIVWVPI 287 (598)
Q Consensus 240 L~gK~VlLyfSal~~~~~-~~~~~~L~~iY~~l~~~~~~~~fEIVwIpi 287 (598)
-.||.+.+.|++.|||.| .+.+. |.++.++. +++.+++.+|+
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~-l~~l~~~~-----~~~v~~~~~~~ 65 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPM-VEDWAKTA-----PQDVVLKQVPI 65 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHH-HHHHHHTC-----CTTEEEEEEEC
T ss_pred CCCCeEEEEEECCCCccHHHhhHH-HHHHHHHC-----CCCeEEEEEec
Confidence 358999999999998544 55555 77776664 23688889998
No 362
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=39.65 E-value=54 Score=26.02 Aligned_cols=44 Identities=7% Similarity=-0.098 Sum_probs=31.6
Q ss_pred CcEEEEEcCCC-hhHHHHHHHHHHHH-HhcC---ceeeEEEeccCCchh
Q 039432 401 GRNICLYGSEN-KDWIIEFNAKMMEI-RRLG---LQVDMVFVGVKNPSE 444 (598)
Q Consensus 401 gK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~---~~~E~v~Vgkd~~~e 444 (598)
+|.+.++|.++ ...|+.+.+.+.++ +... ..+.++.|..+...+
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 69 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERN 69 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHH
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHh
Confidence 77888888885 36679999999999 5421 467777777764443
No 363
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=39.64 E-value=36 Score=31.93 Aligned_cols=53 Identities=8% Similarity=-0.032 Sum_probs=35.0
Q ss_pred cCcEEEEEcC-CC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHhhhh
Q 039432 400 EGRNICLYGS-EN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVLATI 453 (598)
Q Consensus 400 egK~I~LYgg-~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~~i 453 (598)
.||.+.|||. +. ..-|+.-.+.+.++ ++ ++..++++.|+.|.+ +.+++-.+..
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~~~~~~ 103 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQ-FTHLAWINTP 103 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHHHTSC
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHHHHh
Confidence 7899999998 72 23346656666666 43 445799999999854 3455544443
No 364
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=39.56 E-value=51 Score=31.00 Aligned_cols=53 Identities=4% Similarity=-0.118 Sum_probs=38.1
Q ss_pred cCcEEEEEcCC-C-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHhhhh
Q 039432 400 EGRNICLYGSE-N-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVLATI 453 (598)
Q Consensus 400 egK~I~LYgg~-d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~~i 453 (598)
.||.+.|+|.+ . ...|+.-.+.+.++ ++ ++..++++.|+.|.+. ..++..+..
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~-~~~~~~~~~ 124 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQY-SHLAWDNLD 124 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHH-HHHHHHHSC
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHH-HHHHHHHHh
Confidence 79999999984 4 57788888888888 54 4556999999998543 344444433
No 365
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=39.33 E-value=49 Score=26.69 Aligned_cols=40 Identities=8% Similarity=-0.050 Sum_probs=29.3
Q ss_pred cCcEEEEEcCCCh-hHHHHHHHHHHHH-HhcCceeeEEEeccC
Q 039432 400 EGRNICLYGSENK-DWIIEFNAKMMEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~d~-~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd 440 (598)
.||.+.+||.+++ .+|+.+.+.+.++ ++-+ .+.++.|..+
T Consensus 23 ~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~ 64 (111)
T 2pu9_C 23 GDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-DVIFLKLDCN 64 (111)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECS
T ss_pred CCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-CeEEEEEecC
Confidence 5899999998853 6679999999999 5522 2556666655
No 366
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=38.79 E-value=13 Score=35.01 Aligned_cols=27 Identities=26% Similarity=0.507 Sum_probs=20.4
Q ss_pred CCcccccccCCCCCccceeecCCCCccceeeeec
Q 039432 564 PCSHPNVLHYAEGSREGIVVCEKCKRLLKMFVVY 597 (598)
Q Consensus 564 ~C~~~~~~p~~~g~ip~~i~CpeC~R~ME~~v~Y 597 (598)
-|.+..+ |..|+ +||-||.+-+.|..|
T Consensus 143 ~CG~i~~-----~~~p~--~CP~Cg~~~~~F~~~ 169 (170)
T 3pwf_A 143 ICGYTAV-----DEAPE--YCPVCGAPKEKFVVF 169 (170)
T ss_dssp TTCCEEE-----SCCCS--BCTTTCCBGGGCEEE
T ss_pred CCCCeeC-----CCCCC--CCCCCCCCHHHceec
Confidence 4777332 67888 999999999988654
No 367
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=38.52 E-value=52 Score=25.20 Aligned_cols=15 Identities=13% Similarity=0.505 Sum_probs=10.9
Q ss_pred hccCCccEEEEeCCCCce
Q 039432 331 WNFKEEPIMVVLDSQGMV 348 (598)
Q Consensus 331 ~~~~~iP~LVvL~pqGkv 348 (598)
++++++|++++ +|+.
T Consensus 46 ~g~~~vP~~~~---~g~~ 60 (81)
T 1h75_A 46 QGFRQLPVVIA---GDLS 60 (81)
T ss_dssp TTCCSSCEEEE---TTEE
T ss_pred hCCCccCEEEE---CCEE
Confidence 68899999854 4653
No 368
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=38.49 E-value=46 Score=28.30 Aligned_cols=42 Identities=14% Similarity=0.134 Sum_probs=30.3
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHH---HHH-HhcCceeeEEEeccCCc
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKM---MEI-RRLGLQVDMVFVGVKNP 442 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l---~~i-~~~~~~~E~v~Vgkd~~ 442 (598)
.||.+.|+|.++ ..+|+.+.+.+ .++ +..+ .+.++.|.-+..
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~ 76 (134)
T 2fwh_A 30 KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTAN 76 (134)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTC
T ss_pred cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCC
Confidence 489999999885 36679988887 778 5432 377777776543
No 369
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=38.49 E-value=36 Score=31.25 Aligned_cols=51 Identities=4% Similarity=-0.019 Sum_probs=35.5
Q ss_pred cCcEEEEEcC-CC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGS-EN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg-~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|||. ++ ..-|+...+.+.++ ++ .+..++++.|+.|++ +.+++-.+
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~-~~~~~~~~ 89 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSE-YSHLAWTS 89 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHH
Confidence 6899999998 73 34457777788777 44 455799999999853 34444443
No 370
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=44.21 E-value=6.8 Score=30.98 Aligned_cols=43 Identities=12% Similarity=0.010 Sum_probs=29.9
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCC
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKN 441 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~ 441 (598)
..||.+.++|.++ -..|+++.+.+.++ ++.+..+.++.|.-+.
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~ 61 (106)
T 2yj7_A 17 KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDE 61 (106)
Confidence 4788999999883 24458888888888 5533356666666553
No 371
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=37.88 E-value=59 Score=27.61 Aligned_cols=43 Identities=12% Similarity=-0.086 Sum_probs=30.7
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
.++ +.++|.++ -..|+.+.+.+.++ +.-+..+.++.|.-++..
T Consensus 50 ~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~ 94 (140)
T 1v98_A 50 APL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHP 94 (140)
T ss_dssp CCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH
T ss_pred CCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCH
Confidence 445 88888774 36679999999999 654445778888776433
No 372
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=37.61 E-value=48 Score=27.63 Aligned_cols=41 Identities=0% Similarity=-0.010 Sum_probs=30.5
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcC--ceeeEEEeccC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLG--LQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~--~~~E~v~Vgkd 440 (598)
.||.+.++|.++ ..+|+++.+.+.++ ++-. ..+.++.|.-+
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~ 68 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDAT 68 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTT
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCC
Confidence 589999999985 25579999999998 5422 35667766655
No 373
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=36.54 E-value=31 Score=31.03 Aligned_cols=40 Identities=13% Similarity=0.022 Sum_probs=31.2
Q ss_pred cCcEEEEEcC-CChhHH---HHHHHHHHHH-Hh-cCceeeEEEeccCC
Q 039432 400 EGRNICLYGS-ENKDWI---IEFNAKMMEI-RR-LGLQVDMVFVGVKN 441 (598)
Q Consensus 400 egK~I~LYgg-~d~~Wi---r~FT~~l~~i-~~-~~~~~E~v~Vgkd~ 441 (598)
.||.+.|||. + .|| +...+.+.++ ++ .+..++++.|+.|.
T Consensus 30 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~ 75 (187)
T 1we0_A 30 KGKWSIVVFYPA--DFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDT 75 (187)
T ss_dssp SSSEEEEEECSC--TTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CCCCEEEEEECC--CCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCC
Confidence 6899999998 7 665 7788888887 43 33368999999985
No 374
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=35.91 E-value=40 Score=30.29 Aligned_cols=43 Identities=9% Similarity=-0.036 Sum_probs=31.6
Q ss_pred eecCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEc
Q 039432 239 ELKDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPI 287 (598)
Q Consensus 239 ~L~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpi 287 (598)
.+.+|.++.+|++.+|| |..+.+. |.++.++. +++.+++++|+
T Consensus 22 ~~~a~v~i~~f~d~~Cp~C~~~~~~-l~~l~~~~-----~~~v~~~~~p~ 65 (193)
T 2rem_A 22 PLAGKIEVVEIFGYTCPHCAHFDSK-LQAWGARQ-----AKDVRFTLVPA 65 (193)
T ss_dssp CCTTCEEEEEEECTTCHHHHHHHHH-HHHHHHTS-----CTTEEEEEEEC
T ss_pred CCCCCeEEEEEECCCChhHhhhhHH-HHHHHHhc-----CCceEEEEeCc
Confidence 34788899999999985 4455555 77777664 24688889997
No 375
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=35.64 E-value=54 Score=26.99 Aligned_cols=40 Identities=8% Similarity=-0.038 Sum_probs=28.9
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd 440 (598)
.||.+.++|.++ ..+|+++.+.+.++ ++-. .+.++.|..+
T Consensus 36 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~ 77 (124)
T 1faa_A 36 GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCN 77 (124)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecC
Confidence 688999999885 36679999999999 5422 3555666554
No 376
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=35.64 E-value=35 Score=27.93 Aligned_cols=42 Identities=10% Similarity=0.010 Sum_probs=30.8
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHHHHH-Hhc-C----ceeeEEEeccC
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKMMEI-RRL-G----LQVDMVFVGVK 440 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~-~----~~~E~v~Vgkd 440 (598)
..||.+.++|.++ ...|+.+.+.+.++ ++- + ..+.++.|.-+
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~ 71 (121)
T 2djj_A 23 DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDAT 71 (121)
T ss_dssp CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETT
T ss_pred cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECc
Confidence 4789999999985 25569999999998 542 2 25666666655
No 377
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=35.05 E-value=17 Score=33.18 Aligned_cols=53 Identities=6% Similarity=-0.123 Sum_probs=36.9
Q ss_pred cCcEEEEEcC-CC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHhhhh
Q 039432 400 EGRNICLYGS-EN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVLATI 453 (598)
Q Consensus 400 egK~I~LYgg-~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~~i 453 (598)
.||.+.|||. +. ...|+...+.+.++ ++ .+..++++.|+.|. .+.+++-.+.+
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~-~~~~~~~~~~~ 88 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDS-EQVHFAWKNTP 88 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSC-HHHHHHHHTSC
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCC-HHHHHHHHHhh
Confidence 6899999998 72 23348888888887 43 33469999999985 34555554443
No 378
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=35.05 E-value=42 Score=28.62 Aligned_cols=47 Identities=6% Similarity=-0.014 Sum_probs=33.3
Q ss_pred cEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEecc--CCchhhHHHHh
Q 039432 402 RNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGV--KNPSEQVRNVL 450 (598)
Q Consensus 402 K~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgk--d~~~e~v~~~~ 450 (598)
|.+.|+|.+. ...|+...+.+.++ ++- .++++.|+. ++..+.+++.+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~ 81 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYM 81 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHH
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHH
Confidence 7788888764 45678889999888 555 788888888 44455554444
No 379
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=34.83 E-value=26 Score=30.78 Aligned_cols=42 Identities=12% Similarity=0.090 Sum_probs=32.5
Q ss_pred cCcEEEEEcCCC--hhHHHHHHHHHHHH-HhcCceeeEEEeccCCc
Q 039432 400 EGRNICLYGSEN--KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNP 442 (598)
Q Consensus 400 egK~I~LYgg~d--~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~ 442 (598)
.||.+.|+|... ...|+...+.+.++ ++- ..++++.|+.|++
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~ 87 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLP 87 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSG
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCH
Confidence 689899998762 34568888888888 554 6799999999854
No 380
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=34.42 E-value=45 Score=31.19 Aligned_cols=42 Identities=7% Similarity=0.145 Sum_probs=31.2
Q ss_pred cCcE-EEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCC
Q 039432 400 EGRN-ICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKN 441 (598)
Q Consensus 400 egK~-I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~ 441 (598)
.||. +.|+|.+. ...|+...+.+.++ ++ .+..++++.|+.|+
T Consensus 57 ~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~ 102 (218)
T 3u5r_E 57 KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSND 102 (218)
T ss_dssp TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSC
T ss_pred CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCc
Confidence 6885 88888773 24458888888888 54 44569999999863
No 381
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=34.19 E-value=37 Score=29.78 Aligned_cols=16 Identities=25% Similarity=0.594 Sum_probs=12.6
Q ss_pred CccceeecCCCCccce
Q 039432 577 SREGIVVCEKCKRLLK 592 (598)
Q Consensus 577 ~ip~~i~CpeC~R~ME 592 (598)
.--....||+|+|.+-
T Consensus 66 ~~s~~~~C~nC~R~va 81 (99)
T 3mhs_C 66 ESSQYIHCENCGRDVS 81 (99)
T ss_dssp TTSCEEECTTTCCEEE
T ss_pred cCCCeEECCCCCCCch
Confidence 3456889999999874
No 382
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=34.15 E-value=30 Score=31.03 Aligned_cols=41 Identities=7% Similarity=0.125 Sum_probs=29.7
Q ss_pred cCc-EEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccC
Q 039432 400 EGR-NICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK-~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd 440 (598)
.|| .+.|+|.+. ...|+...+.+.++ ++ .+..++++.|+.|
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d 88 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSN 88 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECS
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECC
Confidence 677 488888773 34458888888888 54 3346899999986
No 383
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=34.07 E-value=29 Score=31.12 Aligned_cols=42 Identities=10% Similarity=0.092 Sum_probs=30.1
Q ss_pred cCcEEEEEcCCCh--hHHHHHHHHHHHH-Hh---cCceeeEEEeccCC
Q 039432 400 EGRNICLYGSENK--DWIIEFNAKMMEI-RR---LGLQVDMVFVGVKN 441 (598)
Q Consensus 400 egK~I~LYgg~d~--~Wir~FT~~l~~i-~~---~~~~~E~v~Vgkd~ 441 (598)
.||.+.|||...+ .-|+.-.+.+.++ ++ .+..++++.|+.|.
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~ 74 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDP 74 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCT
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCC
Confidence 6999999998731 2346666677776 43 35779999999873
No 384
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=39.42 E-value=9 Score=32.19 Aligned_cols=43 Identities=19% Similarity=0.223 Sum_probs=31.1
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHH---HHH-HhcCceeeEEEeccC
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKM---MEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l---~~i-~~~~~~~E~v~Vgkd 440 (598)
..+||.+.+||.++ ..+|+.+.+.+ .++ +..+..+.++.|..+
T Consensus 16 ~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 63 (130)
T 2lst_A 16 QAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVD 63 (130)
Confidence 45899999999984 24558898888 777 554445666666654
No 385
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=33.07 E-value=21 Score=31.71 Aligned_cols=44 Identities=9% Similarity=0.006 Sum_probs=29.0
Q ss_pred ccCcEEEEEcCCCh-hHHHHHHHHH---HHH-HhcCceeeEEEeccCCc
Q 039432 399 QEGRNICLYGSENK-DWIIEFNAKM---MEI-RRLGLQVDMVFVGVKNP 442 (598)
Q Consensus 399 ~egK~I~LYgg~d~-~Wir~FT~~l---~~i-~~~~~~~E~v~Vgkd~~ 442 (598)
.+||.|.|+|.+.+ .+|+.+.+.+ .++ +..+..+.++.|.-|+.
T Consensus 45 ~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~ 93 (172)
T 3f9u_A 45 QHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNK 93 (172)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCC
T ss_pred HcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcc
Confidence 58999999999963 6668874333 334 22222688888877643
No 386
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=32.71 E-value=45 Score=31.28 Aligned_cols=39 Identities=13% Similarity=0.074 Sum_probs=30.9
Q ss_pred cCcEEEEEcCCChhHH---HHHHHHHHHH-Hh-cCceeeEEEeccC
Q 039432 400 EGRNICLYGSENKDWI---IEFNAKMMEI-RR-LGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~d~~Wi---r~FT~~l~~i-~~-~~~~~E~v~Vgkd 440 (598)
.||.+.|+|.+ .|| ++-.+.+.++ ++ .+..++++-|+.|
T Consensus 46 ~Gk~vlv~Fwa--twC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVA--SLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEEC--CCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 79999999988 565 7777888888 54 3446999999876
No 387
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.24 E-value=26 Score=29.86 Aligned_cols=42 Identities=10% Similarity=-0.083 Sum_probs=30.4
Q ss_pred cCcEEEEEcCCCh-hHHHHHHHHHHHH-Hh-cCceeeEEEeccCC
Q 039432 400 EGRNICLYGSENK-DWIIEFNAKMMEI-RR-LGLQVDMVFVGVKN 441 (598)
Q Consensus 400 egK~I~LYgg~d~-~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~ 441 (598)
++|.+.++|.+++ ..|+.+.+.+.++ ++ .+..+.++.|.-++
T Consensus 25 ~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~ 69 (137)
T 2dj0_A 25 KRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGR 69 (137)
T ss_dssp TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc
Confidence 4568899999842 3459999999999 55 33467788777664
No 388
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=31.92 E-value=52 Score=29.68 Aligned_cols=41 Identities=7% Similarity=-0.212 Sum_probs=30.8
Q ss_pred cCcEEEEEEecCCCC-ChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEc
Q 039432 241 KDKVVILLVSKPELL-PLEKLFLLVHQTYDHPHNKNLEESYKIVWVPI 287 (598)
Q Consensus 241 ~gK~VlLyfSal~~~-~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpi 287 (598)
.+|.++.+|++.+|| |..+.+. |.++.++. +.++.+..+|+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~-l~~l~~~~-----~~~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPL-LLKLGKAL-----PSDAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHH-HHHHHHHS-----CTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHH-HHHHHHHC-----CCceEEEEecc
Confidence 579999999999985 5555566 78877764 23688888887
No 389
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=31.92 E-value=41 Score=34.83 Aligned_cols=41 Identities=5% Similarity=-0.151 Sum_probs=31.2
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd 440 (598)
.||.+.|+|.+. ...|+...+.+.++ ++ .+..++++.|+.|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d 124 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTP 124 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 699999999883 24458888888888 54 3446899999864
No 390
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=31.56 E-value=61 Score=27.01 Aligned_cols=45 Identities=2% Similarity=-0.123 Sum_probs=32.5
Q ss_pred cCcEEEEEcCCCh-hHHHHHHHHHHHH-Hh-----cCceeeEEEeccCCchh
Q 039432 400 EGRNICLYGSENK-DWIIEFNAKMMEI-RR-----LGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 400 egK~I~LYgg~d~-~Wir~FT~~l~~i-~~-----~~~~~E~v~Vgkd~~~e 444 (598)
.+|.+.++|.+.+ ..|+.+.+.+.++ +. .+..+.++.|.-+..++
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~ 83 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPD 83 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHH
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHh
Confidence 5899999999942 4569999999888 42 23467777777764433
No 391
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=31.47 E-value=47 Score=28.43 Aligned_cols=40 Identities=10% Similarity=-0.034 Sum_probs=28.2
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCC
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKN 441 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~ 441 (598)
.||.+.++|.++ ..+|+.+.+.+.++ ++. .+.++.|..+.
T Consensus 39 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~ 80 (133)
T 3cxg_A 39 QNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDI 80 (133)
T ss_dssp CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccc
Confidence 588999999995 35568888888777 443 45566665553
No 392
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=31.42 E-value=61 Score=28.26 Aligned_cols=43 Identities=19% Similarity=0.129 Sum_probs=31.2
Q ss_pred CcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 401 GRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 401 gK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
||.+.++|.++ ..+|+.+.+.+.++ +.. -.+.++.|.-++..+
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~~~~~ 76 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEGVPE 76 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHH
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECCCCHH
Confidence 89999999885 36679999999999 553 246666676664333
No 393
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=31.14 E-value=33 Score=32.69 Aligned_cols=51 Identities=8% Similarity=-0.033 Sum_probs=35.4
Q ss_pred cCcEEEEEcC-CChhHH---HHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHhhhh
Q 039432 400 EGRNICLYGS-ENKDWI---IEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVLATI 453 (598)
Q Consensus 400 egK~I~LYgg-~d~~Wi---r~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~~i 453 (598)
.||.+.|||. + .|| +.-.+.+.++ ++ ++..++++.|+.|++ +.+++-.+..
T Consensus 55 ~Gk~vvl~F~pa--twCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~~~~~~ 111 (221)
T 2c0d_A 55 GQKYCCLLFYPL--NYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSV-YSHLAWKNMP 111 (221)
T ss_dssp TTCEEEEEECCC--CTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHHHSC
T ss_pred CCCeEEEEEEcC--CCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHh
Confidence 6899999998 7 565 7777777777 43 334689999999754 3444444433
No 394
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=31.04 E-value=76 Score=28.56 Aligned_cols=43 Identities=7% Similarity=-0.023 Sum_probs=30.1
Q ss_pred cCcEEEEEcC-CC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCc
Q 039432 400 EGRNICLYGS-EN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNP 442 (598)
Q Consensus 400 egK~I~LYgg-~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~ 442 (598)
.||++.|||. +. ...|+.=.+.+.++ ++ ++..++++.|+.|++
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~ 96 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSV 96 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCH
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 7898888886 62 34455555666666 43 456799999999854
No 395
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=30.85 E-value=58 Score=31.88 Aligned_cols=21 Identities=10% Similarity=0.433 Sum_probs=16.9
Q ss_pred HHHHhhccC--CccEEEEeCCCCc
Q 039432 326 LIKQEWNFK--EEPIMVVLDSQGM 347 (598)
Q Consensus 326 ~ike~~~~~--~iP~LVvL~pqGk 347 (598)
-|.+.|+++ +.|+++++ ++|+
T Consensus 72 ~l~~~~~V~~~~~PTl~~f-~~G~ 94 (240)
T 2qc7_A 72 ELSEKYKLDKESYPVFYLF-RDGD 94 (240)
T ss_dssp HHHHHTTCCGGGCSEEEEE-ETTC
T ss_pred HHHHHcCCCCCCCCEEEEE-eCCC
Confidence 366788999 99999999 4565
No 396
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=30.39 E-value=35 Score=32.10 Aligned_cols=51 Identities=8% Similarity=-0.130 Sum_probs=35.1
Q ss_pred cCcEEEEEcC-CC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHhh
Q 039432 400 EGRNICLYGS-EN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVLA 451 (598)
Q Consensus 400 egK~I~LYgg-~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~ 451 (598)
.||.+.|||. ++ ..-|+.-.+.+.++ ++ .+..++++.|+.|++ +.+++-.+
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~~~~ 105 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSK-YTHLAWKK 105 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHHS
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHH
Confidence 6899999998 73 24457777777777 43 345799999999854 34444443
No 397
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=29.84 E-value=13 Score=30.83 Aligned_cols=44 Identities=11% Similarity=0.049 Sum_probs=31.5
Q ss_pred cCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 400 EGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 400 egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
.||.+.+||.++ ..+|+.+.+.+.++ +.-+ .+.++.|.-++..+
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~ 80 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKE 80 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGG
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHH
Confidence 589999999884 25569999999998 5533 46677777664433
No 398
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=29.73 E-value=15 Score=29.76 Aligned_cols=43 Identities=7% Similarity=0.064 Sum_probs=30.6
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-Hhc---CceeeEEEeccC
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRL---GLQVDMVFVGVK 440 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~---~~~~E~v~Vgkd 440 (598)
+..||.+.++|.++ ...|+++.+.+.++ +.. +..+.++.|..+
T Consensus 21 ~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~ 68 (120)
T 1mek_A 21 LAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDAT 68 (120)
T ss_dssp HHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETT
T ss_pred HccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCC
Confidence 45789999999885 35569999999888 542 245666666555
No 399
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=29.42 E-value=64 Score=29.71 Aligned_cols=47 Identities=9% Similarity=-0.012 Sum_probs=34.6
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
+..||.+.++|.++ ...|+.+.+.+.++ ++.+..+.++.|.-++..+
T Consensus 111 ~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~ 159 (210)
T 3apq_A 111 VNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRM 159 (210)
T ss_dssp HHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHH
T ss_pred HccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHH
Confidence 45889999999885 35679999999999 6543357777777664433
No 400
>3q87_A Putative uncharacterized protein ECU08_1170; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=29.39 E-value=15 Score=33.38 Aligned_cols=14 Identities=29% Similarity=0.714 Sum_probs=11.5
Q ss_pred ccceeecCCCCccc
Q 039432 578 REGIVVCEKCKRLL 591 (598)
Q Consensus 578 ip~~i~CpeC~R~M 591 (598)
+.++.+||+|||.-
T Consensus 96 ~EG~L~Cp~cgr~y 109 (125)
T 3q87_A 96 VEGSLRCDMCGLIY 109 (125)
T ss_dssp EEEEEEETTTCCEE
T ss_pred EEEEEECCCCCCEe
Confidence 55789999999963
No 401
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=29.12 E-value=27 Score=31.71 Aligned_cols=52 Identities=10% Similarity=-0.118 Sum_probs=35.1
Q ss_pred cCcEEEEEcC-CC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHhhh
Q 039432 400 EGRNICLYGS-EN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVLAT 452 (598)
Q Consensus 400 egK~I~LYgg-~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~~ 452 (598)
.||.+.|||. ++ ..-|+...+.+.++ ++ .+..++++.|+.|++ +.+++-.+.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~-~~~~~~~~~ 85 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSK-FTHLAWKKT 85 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHHTS
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCH-HHHHHHHHh
Confidence 6899999998 73 23347777888777 43 335689999999853 444444433
No 402
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=28.87 E-value=87 Score=24.18 Aligned_cols=38 Identities=8% Similarity=0.133 Sum_probs=30.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHHH-HhcCceeeEEEeccC
Q 039432 403 NICLYGSENKDWIIEFNAKMMEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 403 ~I~LYgg~d~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd 440 (598)
.|-+|.+..-..|+...+.+.++ ++.++.++.+-|..|
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~ 41 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTD 41 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTC
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCC
Confidence 36677777677889999988888 777889999998864
No 403
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=27.66 E-value=74 Score=27.53 Aligned_cols=50 Identities=8% Similarity=-0.012 Sum_probs=33.6
Q ss_pred cCcEEEEEcCC--ChhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHh
Q 039432 400 EGRNICLYGSE--NKDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVL 450 (598)
Q Consensus 400 egK~I~LYgg~--d~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~ 450 (598)
.||.+.|||.. ....|+.-.+.+.++ ++ .+..++++.|+.|+ .+.+++..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~-~~~~~~~~ 87 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDS-VKSHDNFC 87 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSC-HHHHHHHH
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCC-HHHHHHHH
Confidence 68888888864 346677777777777 43 34468899999983 34444433
No 404
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=27.62 E-value=27 Score=33.62 Aligned_cols=45 Identities=4% Similarity=0.045 Sum_probs=33.2
Q ss_pred cCcEEEEEcCCCh-hHHHHHHHHHHHH-HhcCceeeEEEeccCCchh
Q 039432 400 EGRNICLYGSENK-DWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSE 444 (598)
Q Consensus 400 egK~I~LYgg~d~-~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e 444 (598)
.||.+.++|.+.+ ..|+.+.+.+.++ ++.+..+.++.|.-+...+
T Consensus 25 ~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~ 71 (287)
T 3qou_A 25 MTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQM 71 (287)
T ss_dssp TTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHH
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHH
Confidence 4899999999942 3459999999999 6644457777777765443
No 405
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=27.10 E-value=31 Score=32.27 Aligned_cols=43 Identities=12% Similarity=0.085 Sum_probs=28.8
Q ss_pred cccCcEEEEEcCCC-hhHHHHHHHHH---HHH-HhcCceeeEEEeccC
Q 039432 398 VQEGRNICLYGSEN-KDWIIEFNAKM---MEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 398 i~egK~I~LYgg~d-~~Wir~FT~~l---~~i-~~~~~~~E~v~Vgkd 440 (598)
..+||.|+|.|+++ ..||+.+.+.. .++ +..+..|-.+-|-.+
T Consensus 36 ~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~d 83 (173)
T 3ira_A 36 RKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDRE 83 (173)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETT
T ss_pred HHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCc
Confidence 45899999999998 48889887732 344 332335656666554
No 406
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=26.98 E-value=20 Score=30.37 Aligned_cols=18 Identities=17% Similarity=0.503 Sum_probs=15.0
Q ss_pred CccceeecCCCCccceee
Q 039432 577 SREGIVVCEKCKRLLKMF 594 (598)
Q Consensus 577 ~ip~~i~CpeC~R~ME~~ 594 (598)
+++..--||+||+++|+-
T Consensus 27 ~~~~~afCPeCgq~Le~l 44 (81)
T 2jrp_A 27 DFSLQALCPDCRQPLQVL 44 (81)
T ss_dssp EEEEEEECSSSCSCCCEE
T ss_pred cCCCcccCcchhhHHHHH
Confidence 566777999999999984
No 407
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=26.42 E-value=12 Score=33.79 Aligned_cols=43 Identities=14% Similarity=0.124 Sum_probs=29.7
Q ss_pred cccCcEEEEEcCCCh-hHHHHHHHHHHHH-HhcCceeeEEEeccC
Q 039432 398 VQEGRNICLYGSENK-DWIIEFNAKMMEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 398 i~egK~I~LYgg~d~-~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd 440 (598)
...||.++|+|.+++ .+|+.+.+.+.++ +..+..+.++.|.-+
T Consensus 43 ~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d 87 (164)
T 1sen_A 43 AASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLE 87 (164)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEE
T ss_pred HhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEec
Confidence 458999999999953 6679999988776 432223455555555
No 408
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=26.08 E-value=53 Score=30.92 Aligned_cols=50 Identities=10% Similarity=0.011 Sum_probs=34.5
Q ss_pred cCcEEEEEcC-CC-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHh
Q 039432 400 EGRNICLYGS-EN-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVL 450 (598)
Q Consensus 400 egK~I~LYgg-~d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~ 450 (598)
.||.+.|||. ++ ..-|+.-.+.+.++ ++ .+..++++.|+.|.+ +.+++..
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~~~ 108 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSH-FSHLAWI 108 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCH-HHHHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHH
Confidence 6899999998 73 23347777888887 44 345799999999853 3344333
No 409
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=25.57 E-value=72 Score=24.60 Aligned_cols=33 Identities=0% Similarity=-0.161 Sum_probs=19.8
Q ss_pred EEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEc
Q 039432 246 ILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPI 287 (598)
Q Consensus 246 lLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpi 287 (598)
..+|+..|||.|......| ++ .+-+|+++.|.+
T Consensus 6 v~ly~~~~Cp~C~~~~~~L----~~-----~~i~~~~~~vd~ 38 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWF----EE-----NNIAFDETIIDD 38 (89)
T ss_dssp EEEEECTTCHHHHHHHHHH----HH-----TTCCCEEEECCS
T ss_pred EEEEEcCCChhHHHHHHHH----HH-----cCCCceEEEeec
Confidence 4578889975555443323 22 234588887765
No 410
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=25.15 E-value=21 Score=34.01 Aligned_cols=25 Identities=24% Similarity=0.534 Sum_probs=18.6
Q ss_pred CCcccccccCCCC-CccceeecCCCCccceeee
Q 039432 564 PCSHPNVLHYAEG-SREGIVVCEKCKRLLKMFV 595 (598)
Q Consensus 564 ~C~~~~~~p~~~g-~ip~~i~CpeC~R~ME~~v 595 (598)
-|.+.. .| ..|+ +||.||.+-+.|.
T Consensus 160 ~CG~~~-----~g~~~p~--~CP~C~~~k~~f~ 185 (191)
T 1lko_A 160 NCGYVH-----EGTGAPE--LCPACAHPKAHFE 185 (191)
T ss_dssp TTCCEE-----EEEECCS--BCTTTCCBGGGEE
T ss_pred CCCCEe-----eCCCCCC--CCCCCcCCHHHHH
Confidence 477632 35 6777 9999999988884
No 411
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=24.55 E-value=70 Score=29.34 Aligned_cols=51 Identities=12% Similarity=0.068 Sum_probs=33.9
Q ss_pred cCcEEEEEcCCC-hhH-HHHHHHHHHHH-Hh---c-CceeeEEEeccCC---chhhHHHHh
Q 039432 400 EGRNICLYGSEN-KDW-IIEFNAKMMEI-RR---L-GLQVDMVFVGVKN---PSEQVRNVL 450 (598)
Q Consensus 400 egK~I~LYgg~d-~~W-ir~FT~~l~~i-~~---~-~~~~E~v~Vgkd~---~~e~v~~~~ 450 (598)
.||.+.|||... ..- |+...+.+.++ ++ . +..++++.|+.|. ..+.+++-.
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~ 100 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYL 100 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHH
Confidence 789999999873 222 56677777776 32 2 4579999999884 334444443
No 412
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=24.35 E-value=36 Score=26.20 Aligned_cols=24 Identities=17% Similarity=0.175 Sum_probs=18.3
Q ss_pred CCcccccccCCCCCccceeecCCCCc
Q 039432 564 PCSHPNVLHYAEGSREGIVVCEKCKR 589 (598)
Q Consensus 564 ~C~~~~~~p~~~g~ip~~i~CpeC~R 589 (598)
.|.+ ++....=.+.-.|.||-||-
T Consensus 8 rCg~--~fs~~el~~lP~IrCpyCGy 31 (48)
T 4ayb_P 8 KCWK--TFTDEQLKVLPGVRCPYCGY 31 (48)
T ss_dssp CTTT--TCCCCCSCCCSSSCCTTTCC
T ss_pred ccCC--CccHHHHhhCCCcccCccCc
Confidence 4665 56666777888999999994
No 413
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=24.18 E-value=38 Score=30.34 Aligned_cols=42 Identities=12% Similarity=0.001 Sum_probs=32.3
Q ss_pred cCcEEEEEcCCC--hhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 400 EGRNICLYGSEN--KDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 400 egK~I~LYgg~d--~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
.||.+.|||... ..-|+.-.+.+.++ ++ ..++++.|+.|++.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~ 87 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPF 87 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHH
Confidence 689999999862 23458888889888 55 67899999998643
No 414
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=24.07 E-value=18 Score=30.79 Aligned_cols=43 Identities=7% Similarity=-0.076 Sum_probs=29.0
Q ss_pred ccCcEEEEEcCCCh-h--------------HHHHHHHHHHHH-HhcCceeeEEEeccCC
Q 039432 399 QEGRNICLYGSENK-D--------------WIIEFNAKMMEI-RRLGLQVDMVFVGVKN 441 (598)
Q Consensus 399 ~egK~I~LYgg~d~-~--------------Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~ 441 (598)
+.||.+.++|.+++ . .|+.+.+.+.++ ++-+..+.++.|.-|+
T Consensus 19 ~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~ 77 (123)
T 1oaz_A 19 KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQ 77 (123)
T ss_dssp SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTS
T ss_pred hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCC
Confidence 57999999998863 6 677888888877 5433357777777664
No 415
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=23.98 E-value=46 Score=27.56 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=22.5
Q ss_pred cCcEEEEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEc
Q 039432 241 KDKVVILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPI 287 (598)
Q Consensus 241 ~gK~VlLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpi 287 (598)
..+.+.++|++.||++|+.+ .++.+++. .++++.-|-+
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~----~~~L~~l~-----~~i~~~~vdi 51 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEA----KEVLQPYK-----DRFILQEVDI 51 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHH----HHHTSTTS-----SSSEEEEEET
T ss_pred CCCCEEEEEeCCCCcchHHH----HHHHHHhh-----hCCeEEEEEC
Confidence 34567888999998656543 34455552 1255555555
No 416
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=23.60 E-value=1.2e+02 Score=26.71 Aligned_cols=49 Identities=14% Similarity=0.074 Sum_probs=32.9
Q ss_pred cCcEEEEEcC-C-ChhHHHHHHHHHHHH-HhcCceeeEEEeccCCchhhHHHHh
Q 039432 400 EGRNICLYGS-E-NKDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPSEQVRNVL 450 (598)
Q Consensus 400 egK~I~LYgg-~-d~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~e~v~~~~ 450 (598)
.||.+.|+|- . ....|+.-.+.+.++ ++- ..++++.|+.|++ +.+++-.
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~-~~~~~~~ 97 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLP-FAQKRFC 97 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCH-HHHHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCH-HHHHHHH
Confidence 6888888873 4 345566666777777 444 6899999999853 3444433
No 417
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=23.59 E-value=29 Score=28.51 Aligned_cols=14 Identities=21% Similarity=0.453 Sum_probs=12.0
Q ss_pred cceeecCCCCccce
Q 039432 579 EGIVVCEKCKRLLK 592 (598)
Q Consensus 579 p~~i~CpeC~R~ME 592 (598)
+-++.||.|||+.+
T Consensus 7 ~~~~~CP~Cgkp~~ 20 (68)
T 1lv3_A 7 TITVNCPTCGKTVV 20 (68)
T ss_dssp CCEEECTTTCCEEE
T ss_pred CCcCcCCCCCCccc
Confidence 45789999999986
No 418
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=23.30 E-value=54 Score=27.16 Aligned_cols=42 Identities=2% Similarity=-0.103 Sum_probs=29.5
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHH---HHH-HhcCceeeEEEeccC
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKM---MEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l---~~i-~~~~~~~E~v~Vgkd 440 (598)
..||.+.|+|.+. ..+|+.+.+.+ .++ +..+..+..+.|..+
T Consensus 25 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 71 (130)
T 2kuc_A 25 VEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDME 71 (130)
T ss_dssp HHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSS
T ss_pred hcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecC
Confidence 3789999999885 36679999888 666 443445666666555
No 419
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=23.22 E-value=29 Score=27.11 Aligned_cols=13 Identities=15% Similarity=0.158 Sum_probs=5.9
Q ss_pred CccceeecCCCCc
Q 039432 577 SREGIVVCEKCKR 589 (598)
Q Consensus 577 ~ip~~i~CpeC~R 589 (598)
+..+...||+||.
T Consensus 7 ~ll~~~~Cp~C~~ 19 (58)
T 1dl6_A 7 DALPRVTCPNHPD 19 (58)
T ss_dssp CCCSCCSBTTBSS
T ss_pred hccccccCcCCCC
Confidence 3444444555544
No 420
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=23.22 E-value=31 Score=31.57 Aligned_cols=24 Identities=21% Similarity=0.333 Sum_probs=15.8
Q ss_pred CCcccccccCCCCCccceeecCCCCcccee
Q 039432 564 PCSHPNVLHYAEGSREGIVVCEKCKRLLKM 593 (598)
Q Consensus 564 ~C~~~~~~p~~~g~ip~~i~CpeC~R~ME~ 593 (598)
.|.+.++.. +....||+||-++++
T Consensus 137 ~Cg~~~~~~------~~~~~Cp~CG~~~~~ 160 (165)
T 2lcq_A 137 GCGRKFSTL------PPGGVCPDCGSKVKL 160 (165)
T ss_dssp SSCCEESSC------CGGGBCTTTCCBEEE
T ss_pred CCCCcccCC------CCCCcCCCCCCccee
Confidence 477734321 445699999988764
No 421
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=23.04 E-value=3.6e+02 Score=24.05 Aligned_cols=41 Identities=10% Similarity=-0.040 Sum_probs=27.4
Q ss_pred cCcEEEEEcCC-ChhHHHHHHHHHHHH-HhcCceeeEEEeccC
Q 039432 400 EGRNICLYGSE-NKDWIIEFNAKMMEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~-d~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd 440 (598)
.||.+.+.|.+ ...+|+.|.+.+.++ ++.+..++++++.-+
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 56755555555 468889999999999 654335555555544
No 422
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=22.86 E-value=95 Score=27.96 Aligned_cols=42 Identities=10% Similarity=-0.027 Sum_probs=0.0
Q ss_pred cCcEEEEEEecCCCCChhhhhHHHHHHhcCcCCCCCCCCeEEEEEEc
Q 039432 241 KDKVVILLVSKPELLPLEKLFLLVHQTYDHPHNKNLEESYKIVWVPI 287 (598)
Q Consensus 241 ~gK~VlLyfSal~~~~~~~~~~~L~~iY~~l~~~~~~~~fEIVwIpi 287 (598)
.+|.+++.|++.|||.|..+...|.++.++ .++++.++.+|+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~-----~~~~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEK-----LPADVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHT-----CCTTEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHh-----CCCCeEEEEEeh
No 423
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=22.79 E-value=2.1e+02 Score=27.38 Aligned_cols=52 Identities=8% Similarity=0.011 Sum_probs=34.7
Q ss_pred cCcEEEEEcCC-C-hhHHHHHHHHHHHH-Hh-cCceeeEEEeccCCchhhHHHHhhh
Q 039432 400 EGRNICLYGSE-N-KDWIIEFNAKMMEI-RR-LGLQVDMVFVGVKNPSEQVRNVLAT 452 (598)
Q Consensus 400 egK~I~LYgg~-d-~~Wir~FT~~l~~i-~~-~~~~~E~v~Vgkd~~~e~v~~~~~~ 452 (598)
.||++.|+|.. + ...|+.=.+.+.++ ++ ++..++++.|+.|.+ +..++-.+.
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~-~~~~~~~~~ 131 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQ-FTHLAWIIT 131 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCH-HHHHHHHHS
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHHHH
Confidence 79999888865 3 45666666677777 43 455799999998853 333444433
No 424
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.65 E-value=87 Score=26.84 Aligned_cols=40 Identities=10% Similarity=0.084 Sum_probs=28.2
Q ss_pred cCcEEEEEcCCCh-hHHHHHHHHHHHH-HhcCceeeEEEeccC
Q 039432 400 EGRNICLYGSENK-DWIIEFNAKMMEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 400 egK~I~LYgg~d~-~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd 440 (598)
.||.+.+||.+++ ..|+.+.+.+.++ ++. ..+.++.|..+
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~-~~v~~~~vd~~ 70 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKF-PETKFVKAIVN 70 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHC-SSEEEEEECCS
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHC-CCcEEEEEEhh
Confidence 4689999999942 4469999999999 553 23555555544
No 425
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=22.31 E-value=1.3e+02 Score=26.29 Aligned_cols=42 Identities=14% Similarity=0.117 Sum_probs=29.7
Q ss_pred cCcEEEEEcC-C-ChhHHHHHHHHHHHH-HhcCceeeEEEeccCCc
Q 039432 400 EGRNICLYGS-E-NKDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNP 442 (598)
Q Consensus 400 egK~I~LYgg-~-d~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~ 442 (598)
.||.+.|||. . ...-|+.-.+.+.++ ++- ..++++.|+.|.+
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~ 85 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLP 85 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCH
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCH
Confidence 7899999986 3 234456666666666 444 5799999998853
No 426
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=22.03 E-value=1e+02 Score=27.06 Aligned_cols=41 Identities=7% Similarity=0.006 Sum_probs=28.6
Q ss_pred cCcEEEEEcC-C-ChhHHHHHHHHHHHH-HhcCceeeEEEeccCCc
Q 039432 400 EGRNICLYGS-E-NKDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNP 442 (598)
Q Consensus 400 egK~I~LYgg-~-d~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~ 442 (598)
.||.+.|+|. + ....|+.=.+.+.++ ++ ..++++.|+.|++
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~ 88 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLP 88 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCH
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCH
Confidence 7898888885 4 235556555666666 44 6789999998853
No 427
>3hvm_A Agmatine deiminase; hydrolase; 2.10A {Helicobacter pylori} SCOP: d.126.1.6 PDB: 2cmu_A
Probab=21.61 E-value=72 Score=33.17 Aligned_cols=108 Identities=13% Similarity=0.063 Sum_probs=62.0
Q ss_pred ecCcEEEEEEecCCCCChhhhhHHHHHHhcCcCC--CCCCCCeEEEEEEc-CCCCCC-ChHhHHHHHHhhcCCCeeeee-
Q 039432 240 LKDKVVILLVSKPELLPLEKLFLLVHQTYDHPHN--KNLEESYKIVWVPI-SSSETW-TDVEERNFELFSCSLPWYSVR- 314 (598)
Q Consensus 240 L~gK~VlLyfSal~~~~~~~~~~~L~~iY~~l~~--~~~~~~fEIVwIpi-d~~~~W-~D~de~~Fe~~~~~MPWyAVp- 314 (598)
+.+..+.||-...+ +-...... +.++|+.|++ ...|..|||+=+|. +..... .++--.++-++.=.=-=.-||
T Consensus 209 Fv~p~~v~~~~~~d-~~d~~y~~-~~~~~~~L~~~~da~Gr~~~i~~lp~P~~~~~~~g~rl~aSY~Nfli~Ng~VivP~ 286 (330)
T 3hvm_A 209 FLDKDTIVYSACED-KNDEHYTA-LKKMQEELKTFKKLDKTPYKLIPLEIPKAIFDENQQRLPATYVNFLLCNDALIVPT 286 (330)
T ss_dssp EEETTEEEEEECCC-TTSTTHHH-HHHHHHHHHHCBCTTSCBCEEEEEECCSCCBCTTCCBCCCCTTCCEEETTEEEEEE
T ss_pred ecCCCEEEEEcCCC-CCCccHHH-HHHHHHHHHhhhhccCCceEEEEeCCCCccccCCCCCcccchhheeeECCEEEEec
Confidence 44455566666666 44444566 8899999832 23578899999998 332100 000001111111000011234
Q ss_pred cCCcccHHHHHHHHHhhccCCccEEEEeCCCCceechhHHHHHHHhCc
Q 039432 315 QPQLLNSAVVNLIKQEWNFKEEPIMVVLDSQGMVTNSNALDMVLIWGA 362 (598)
Q Consensus 315 ~~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~ 362 (598)
|.+.-|..+.+.|++.| |+ +|+--|++.+++..|.
T Consensus 287 fgd~~D~~A~~~l~~~f------------P~-~Vv~i~~~~i~~~gG~ 321 (330)
T 3hvm_A 287 YNDPKDALILETLKQHT------------PL-EVIGVDCNTLIKQHGS 321 (330)
T ss_dssp CSCTTHHHHHHHHHTTC------------SS-EEEEEECHHHHHTTCC
T ss_pred CCChHHHHHHHHHHHhC------------CC-CEEEEEhHHHHhCCCc
Confidence 44444778888888877 46 8888888888887775
No 428
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=21.58 E-value=68 Score=24.21 Aligned_cols=38 Identities=8% Similarity=-0.017 Sum_probs=25.5
Q ss_pred EEcCC-ChhHHHHHHHHHHHH-HhcCceeeEEEeccCCch
Q 039432 406 LYGSE-NKDWIIEFNAKMMEI-RRLGLQVDMVFVGVKNPS 443 (598)
Q Consensus 406 LYgg~-d~~Wir~FT~~l~~i-~~~~~~~E~v~Vgkd~~~ 443 (598)
++|++ .-.+|+++.+.+.++ ++.+..++++.|.-++..
T Consensus 6 v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~ 45 (85)
T 1nho_A 6 EVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDR 45 (85)
T ss_dssp EEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCG
T ss_pred EEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCH
Confidence 44455 346679999999999 664446777777666433
No 429
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=21.15 E-value=55 Score=29.85 Aligned_cols=42 Identities=5% Similarity=-0.145 Sum_probs=28.0
Q ss_pred ccCcEEEEEcCCC-hhHHHHHHHHH---HHH-HhcCceeeEEEeccC
Q 039432 399 QEGRNICLYGSEN-KDWIIEFNAKM---MEI-RRLGLQVDMVFVGVK 440 (598)
Q Consensus 399 ~egK~I~LYgg~d-~~Wir~FT~~l---~~i-~~~~~~~E~v~Vgkd 440 (598)
++||.|+||++++ ..||+.|.... .+| +..+..|-.+.+-.+
T Consensus 40 ~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~ 86 (153)
T 2dlx_A 40 MQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHD 86 (153)
T ss_dssp HHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESS
T ss_pred HcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecC
Confidence 4799999999987 48889886544 344 222235666666554
No 430
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=20.90 E-value=30 Score=29.66 Aligned_cols=18 Identities=22% Similarity=0.586 Sum_probs=14.8
Q ss_pred CCCccceeecCCCCccce
Q 039432 575 EGSREGIVVCEKCKRLLK 592 (598)
Q Consensus 575 ~g~ip~~i~CpeC~R~ME 592 (598)
-.-.|+.|.|-+||+.+.
T Consensus 15 ksi~~d~iiClecGK~fK 32 (87)
T 2jsp_A 15 KSVQDDHIVCLECGGSFK 32 (87)
T ss_dssp TTBCSSCEECTBTCCEES
T ss_pred hccCCCceEecccchhhH
Confidence 345789999999999875
No 431
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=20.83 E-value=43 Score=27.36 Aligned_cols=21 Identities=14% Similarity=0.311 Sum_probs=18.0
Q ss_pred CCccceeecCCCCccceeeee
Q 039432 576 GSREGIVVCEKCKRLLKMFVV 596 (598)
Q Consensus 576 g~ip~~i~CpeC~R~ME~~v~ 596 (598)
..+|+.-+||.||.+=+.|..
T Consensus 35 ~~lPddw~CP~Cga~K~~F~~ 55 (70)
T 1dx8_A 35 VDLSDSFMCPACRSPKNQFKS 55 (70)
T ss_dssp GGSCTTCBCTTTCCBGGGEEE
T ss_pred hhCCCCCcCCCCCCCHHHceE
Confidence 579999999999998888854
No 432
>3r8s_0 50S ribosomal protein L32; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_Z 1p86_Z 2awb_0 2aw4_0 2i2v_0 2j28_0 2i2t_0* 2qao_0* 2qba_0* 2qbc_0* 2qbe_0 2qbg_0 2qbi_0* 2qbk_0* 2qov_0 2qox_0 2qoz_0* 2qp1_0* 2rdo_0 2vhm_0 ...
Probab=20.39 E-value=36 Score=26.66 Aligned_cols=14 Identities=7% Similarity=-0.069 Sum_probs=11.3
Q ss_pred ccceeecCCCCccc
Q 039432 578 REGIVVCEKCKRLL 591 (598)
Q Consensus 578 ip~~i~CpeC~R~M 591 (598)
+|..+.||+||...
T Consensus 24 ~p~l~~c~~cGe~~ 37 (56)
T 3r8s_0 24 VTSLSVDKTSGEKH 37 (56)
T ss_dssp CCCEEECTTTCCEE
T ss_pred CCceeECCCCCCee
Confidence 37899999999753
Done!