Query 039436
Match_columns 422
No_of_seqs 173 out of 1642
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 09:38:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039436.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039436hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02670 transferase, transfer 100.0 5.1E-68 1.1E-72 521.1 35.3 398 1-420 11-433 (472)
2 PLN00414 glycosyltransferase f 100.0 1.1E-67 2.4E-72 518.0 34.8 387 1-417 9-403 (446)
3 PLN02764 glycosyltransferase f 100.0 6E-67 1.3E-71 509.6 36.2 388 1-417 10-408 (453)
4 PLN02863 UDP-glucoronosyl/UDP- 100.0 8.4E-67 1.8E-71 515.9 36.2 399 1-420 14-438 (477)
5 PLN02992 coniferyl-alcohol glu 100.0 7.9E-67 1.7E-71 513.1 35.2 396 1-421 10-432 (481)
6 PLN03004 UDP-glycosyltransfera 100.0 1.1E-66 2.3E-71 509.8 35.4 404 1-421 8-429 (451)
7 PLN02173 UDP-glucosyl transfer 100.0 2.3E-66 4.9E-71 507.2 37.3 384 1-421 10-413 (449)
8 PLN02208 glycosyltransferase f 100.0 1.4E-66 3.1E-71 509.6 34.5 387 1-417 9-402 (442)
9 PLN02410 UDP-glucoronosyl/UDP- 100.0 6.3E-66 1.4E-70 506.2 36.8 385 1-421 12-415 (451)
10 PLN03015 UDP-glucosyl transfer 100.0 3.1E-65 6.7E-70 499.0 35.5 404 1-422 8-434 (470)
11 PLN02534 UDP-glycosyltransfera 100.0 3.8E-65 8.1E-70 503.2 36.3 405 1-421 13-451 (491)
12 PLN02555 limonoid glucosyltran 100.0 4.1E-65 8.9E-70 502.3 35.6 401 1-422 12-435 (480)
13 PLN00164 glucosyltransferase; 100.0 1E-64 2.3E-69 502.6 36.2 399 1-418 8-433 (480)
14 PLN02562 UDP-glycosyltransfera 100.0 1.8E-64 3.9E-69 497.3 36.3 383 1-421 11-418 (448)
15 PLN02207 UDP-glycosyltransfera 100.0 8E-64 1.7E-68 491.0 34.3 390 1-415 8-425 (468)
16 PLN03007 UDP-glucosyltransfera 100.0 4.6E-63 9.9E-68 493.2 37.1 403 1-421 10-445 (482)
17 PLN02152 indole-3-acetate beta 100.0 4.8E-63 1E-67 484.5 35.2 392 1-418 8-419 (455)
18 PLN02210 UDP-glucosyl transfer 100.0 7.2E-63 1.5E-67 486.5 32.1 380 1-421 13-420 (456)
19 PLN02554 UDP-glycosyltransfera 100.0 3.4E-62 7.3E-67 486.4 34.1 398 1-420 7-445 (481)
20 PLN02167 UDP-glycosyltransfera 100.0 3.8E-62 8.3E-67 485.2 33.0 398 1-417 8-435 (475)
21 PLN02448 UDP-glycosyltransfera 100.0 3.1E-61 6.6E-66 477.8 35.9 381 1-421 15-422 (459)
22 TIGR01426 MGT glycosyltransfer 100.0 6.7E-41 1.5E-45 329.0 27.0 347 2-420 1-363 (392)
23 PF00201 UDPGT: UDP-glucoronos 100.0 1.6E-44 3.4E-49 365.7 1.3 168 224-421 246-414 (500)
24 PHA03392 egt ecdysteroid UDP-g 100.0 3.8E-41 8.2E-46 336.5 24.3 367 2-421 27-437 (507)
25 KOG1192 UDP-glucuronosyl and U 100.0 3.9E-41 8.3E-46 340.9 15.0 383 1-420 10-426 (496)
26 cd03784 GT1_Gtf_like This fami 100.0 1.8E-40 3.8E-45 327.2 16.1 346 1-419 5-375 (401)
27 COG1819 Glycosyl transferases, 100.0 6.5E-36 1.4E-40 291.2 17.1 357 1-421 6-373 (406)
28 PF13528 Glyco_trans_1_3: Glyc 99.9 3.6E-21 7.7E-26 183.8 24.9 301 5-413 10-317 (318)
29 TIGR00661 MJ1255 conserved hyp 99.9 1.2E-19 2.5E-24 173.3 27.1 126 259-420 188-318 (321)
30 PRK12446 undecaprenyldiphospho 99.9 6.3E-20 1.4E-24 176.6 23.1 307 3-417 8-326 (352)
31 COG0707 MurG UDP-N-acetylgluco 99.7 2.7E-15 5.9E-20 143.1 21.4 137 258-417 182-325 (357)
32 cd03785 GT1_MurG MurG is an N- 99.6 1.2E-13 2.5E-18 133.6 23.7 312 5-419 8-327 (350)
33 PRK00726 murG undecaprenyldiph 99.6 2.2E-13 4.8E-18 132.2 22.7 86 326-419 237-327 (357)
34 TIGR01133 murG undecaprenyldip 99.5 8.6E-12 1.9E-16 120.5 24.1 79 333-419 243-324 (348)
35 TIGR03590 PseG pseudaminic aci 99.5 6E-12 1.3E-16 117.4 19.4 104 260-380 171-278 (279)
36 PF04101 Glyco_tran_28_C: Glyc 99.4 7.4E-15 1.6E-19 126.6 -1.2 139 261-419 1-147 (167)
37 COG4671 Predicted glycosyl tra 99.3 7.1E-10 1.5E-14 101.8 23.4 325 5-417 20-366 (400)
38 PF03033 Glyco_transf_28: Glyc 99.3 5.2E-14 1.1E-18 117.4 -4.1 123 1-144 3-132 (139)
39 TIGR00215 lpxB lipid-A-disacch 99.3 5.9E-11 1.3E-15 116.0 16.5 75 334-417 261-348 (385)
40 PRK13609 diacylglycerol glucos 99.2 4.5E-09 9.7E-14 103.0 21.4 135 258-418 201-340 (380)
41 TIGR03492 conserved hypothetic 98.9 7.3E-08 1.6E-12 94.5 19.5 139 259-418 205-366 (396)
42 PRK00025 lpxB lipid-A-disaccha 98.9 2.4E-08 5.2E-13 97.8 14.7 76 335-419 256-344 (380)
43 cd03814 GT1_like_2 This family 98.9 1.9E-06 4.2E-11 82.9 25.7 130 260-419 197-335 (364)
44 cd03800 GT1_Sucrose_synthase T 98.8 2.7E-06 5.9E-11 83.3 26.0 82 323-418 282-370 (398)
45 PLN02605 monogalactosyldiacylg 98.8 3.5E-07 7.5E-12 89.6 18.5 81 324-416 265-347 (382)
46 cd03818 GT1_ExpC_like This fam 98.8 9.5E-06 2.1E-10 79.9 27.9 82 323-418 280-368 (396)
47 PLN02871 UDP-sulfoquinovose:DA 98.7 1.5E-05 3.3E-10 80.2 26.5 131 261-418 264-402 (465)
48 cd03823 GT1_ExpE7_like This fa 98.6 4E-05 8.7E-10 73.4 25.9 133 259-418 190-331 (359)
49 cd03794 GT1_wbuB_like This fam 98.6 1.6E-05 3.4E-10 76.9 23.1 132 259-418 219-367 (394)
50 PRK13608 diacylglycerol glucos 98.6 4.9E-07 1.1E-11 88.8 11.9 135 258-418 201-340 (391)
51 cd03786 GT1_UDP-GlcNAc_2-Epime 98.5 2.5E-06 5.4E-11 82.9 15.4 136 258-419 197-340 (363)
52 COG3980 spsG Spore coat polysa 98.5 9.1E-06 2E-10 73.0 15.9 131 262-416 161-293 (318)
53 cd03817 GT1_UGDG_like This fam 98.5 4.3E-05 9.2E-10 73.5 22.4 130 260-418 202-345 (374)
54 cd03808 GT1_cap1E_like This fa 98.4 0.00019 4.2E-09 68.3 24.4 136 259-418 187-331 (359)
55 cd03801 GT1_YqgM_like This fam 98.4 0.00026 5.6E-09 67.5 24.9 83 323-419 255-344 (374)
56 cd03820 GT1_amsD_like This fam 98.4 0.00021 4.5E-09 67.8 23.6 81 325-419 236-322 (348)
57 PRK05749 3-deoxy-D-manno-octul 98.3 7.9E-05 1.7E-09 74.1 21.1 71 336-418 315-390 (425)
58 TIGR03449 mycothiol_MshA UDP-N 98.3 0.00032 7E-09 69.2 24.9 81 324-418 283-370 (405)
59 TIGR02472 sucr_P_syn_N sucrose 98.3 0.00033 7.2E-09 70.0 24.6 82 325-418 318-408 (439)
60 cd03805 GT1_ALG2_like This fam 98.3 0.001 2.2E-08 65.1 27.8 80 324-418 280-366 (392)
61 cd03816 GT1_ALG1_like This fam 98.3 0.00099 2.1E-08 66.1 27.2 76 325-416 295-381 (415)
62 PRK10307 putative glycosyl tra 98.2 0.00043 9.2E-09 68.5 23.8 83 324-418 284-375 (412)
63 cd03798 GT1_wlbH_like This fam 98.2 0.002 4.3E-08 61.6 27.8 134 259-418 201-346 (377)
64 cd04962 GT1_like_5 This family 98.2 0.0012 2.7E-08 63.9 24.6 81 324-418 253-338 (371)
65 cd03795 GT1_like_4 This family 98.1 0.001 2.3E-08 63.9 23.7 134 260-418 191-334 (357)
66 cd03796 GT1_PIG-A_like This fa 98.1 0.00064 1.4E-08 67.0 22.0 132 259-417 192-334 (398)
67 TIGR00236 wecB UDP-N-acetylglu 98.1 0.00027 5.9E-09 68.7 18.7 79 324-418 255-336 (365)
68 PF04007 DUF354: Protein of un 98.1 0.0013 2.8E-08 62.6 22.0 127 258-415 178-309 (335)
69 cd05844 GT1_like_7 Glycosyltra 98.1 0.00083 1.8E-08 65.0 21.5 81 324-418 245-338 (367)
70 TIGR02468 sucrsPsyn_pln sucros 98.1 0.0017 3.8E-08 69.8 25.0 82 325-418 549-639 (1050)
71 cd03819 GT1_WavL_like This fam 98.1 0.0049 1.1E-07 59.2 26.6 133 259-415 184-329 (355)
72 cd03821 GT1_Bme6_like This fam 98.0 0.0022 4.7E-08 61.5 23.6 79 323-417 261-346 (375)
73 cd03799 GT1_amsK_like This is 98.0 0.0014 2.9E-08 63.0 22.1 135 259-418 178-329 (355)
74 KOG3349 Predicted glycosyltran 98.0 2.9E-05 6.2E-10 62.9 8.3 112 261-386 5-127 (170)
75 cd04955 GT1_like_6 This family 97.9 0.0022 4.8E-08 61.8 21.8 79 323-417 247-331 (363)
76 cd03822 GT1_ecORF704_like This 97.9 0.004 8.7E-08 59.8 22.8 80 324-418 247-336 (366)
77 cd03811 GT1_WabH_like This fam 97.9 0.0055 1.2E-07 58.0 22.7 80 324-417 246-333 (353)
78 cd03806 GT1_ALG11_like This fa 97.9 0.0078 1.7E-07 59.7 24.2 79 324-418 305-394 (419)
79 cd03812 GT1_CapH_like This fam 97.8 0.017 3.6E-07 55.5 24.6 132 260-420 192-335 (358)
80 COG1519 KdtA 3-deoxy-D-manno-o 97.8 0.0086 1.9E-07 57.6 21.4 63 346-419 327-389 (419)
81 TIGR03087 stp1 sugar transfera 97.7 0.0062 1.3E-07 60.0 21.4 81 322-418 278-364 (397)
82 cd04951 GT1_WbdM_like This fam 97.7 0.0041 8.9E-08 59.8 19.5 76 324-415 245-325 (360)
83 PLN02275 transferase, transfer 97.7 0.057 1.2E-06 52.7 30.0 75 324-414 286-371 (371)
84 cd03809 GT1_mtfB_like This fam 97.6 0.0058 1.3E-07 58.6 19.2 135 260-419 195-339 (365)
85 PRK14089 ipid-A-disaccharide s 97.6 0.0027 5.8E-08 60.9 15.7 75 334-412 229-315 (347)
86 cd03807 GT1_WbnK_like This fam 97.6 0.04 8.6E-07 52.4 23.5 78 325-418 252-334 (365)
87 cd03802 GT1_AviGT4_like This f 97.5 0.012 2.5E-07 56.0 19.2 127 262-416 173-308 (335)
88 PLN02846 digalactosyldiacylgly 97.4 0.079 1.7E-06 52.9 23.4 74 327-417 287-364 (462)
89 PLN00142 sucrose synthase 97.4 0.027 5.8E-07 59.5 20.7 60 343-414 667-730 (815)
90 PF02350 Epimerase_2: UDP-N-ac 97.3 0.0034 7.4E-08 60.5 12.2 132 257-416 178-318 (346)
91 PRK15179 Vi polysaccharide bio 97.3 0.25 5.4E-06 52.0 26.2 81 323-415 573-658 (694)
92 PRK01021 lpxB lipid-A-disaccha 97.2 0.023 4.9E-07 57.8 17.6 175 223-419 380-574 (608)
93 COG5017 Uncharacterized conser 97.1 0.0053 1.1E-07 49.1 9.6 107 262-392 2-122 (161)
94 TIGR02470 sucr_synth sucrose s 97.1 0.48 1E-05 50.3 28.3 78 325-414 620-707 (784)
95 TIGR03568 NeuC_NnaA UDP-N-acet 97.1 0.28 6E-06 47.8 23.2 131 259-415 201-338 (365)
96 cd04946 GT1_AmsK_like This fam 97.1 0.0088 1.9E-07 59.2 12.8 136 260-418 230-379 (407)
97 PF06722 DUF1205: Protein of u 97.1 0.00059 1.3E-08 52.3 3.5 66 243-315 24-94 (97)
98 TIGR03088 stp2 sugar transfera 97.0 0.4 8.6E-06 46.5 25.8 80 325-418 256-340 (374)
99 PLN02501 digalactosyldiacylgly 97.0 0.018 3.8E-07 59.4 14.0 76 326-418 603-683 (794)
100 PLN02949 transferase, transfer 96.9 0.42 9.2E-06 48.0 23.2 79 324-416 335-422 (463)
101 cd03792 GT1_Trehalose_phosphor 96.9 0.2 4.4E-06 48.7 20.6 79 324-418 252-339 (372)
102 cd03804 GT1_wbaZ_like This fam 96.8 0.0072 1.6E-07 58.2 9.8 125 262-417 197-327 (351)
103 cd04949 GT1_gtfA_like This fam 96.8 0.087 1.9E-06 51.1 17.5 81 325-418 262-347 (372)
104 PF02684 LpxB: Lipid-A-disacch 96.8 0.065 1.4E-06 51.9 16.1 82 333-419 253-343 (373)
105 PF13844 Glyco_transf_41: Glyc 96.8 0.0043 9.3E-08 61.3 8.1 126 257-391 282-413 (468)
106 PRK15427 colanic acid biosynth 96.8 0.016 3.5E-07 57.2 11.9 84 323-418 278-373 (406)
107 PF13692 Glyco_trans_1_4: Glyc 96.6 0.0086 1.9E-07 48.9 7.4 126 262-416 4-135 (135)
108 cd04950 GT1_like_1 Glycosyltra 96.6 0.83 1.8E-05 44.5 26.7 77 323-417 253-341 (373)
109 PF00534 Glycos_transf_1: Glyc 96.6 0.022 4.7E-07 48.6 10.0 138 258-418 13-160 (172)
110 PRK09922 UDP-D-galactose:(gluc 96.5 0.025 5.4E-07 54.9 10.8 136 260-418 180-326 (359)
111 COG0381 WecB UDP-N-acetylgluco 96.4 0.38 8.2E-06 46.1 17.5 133 259-420 204-345 (383)
112 PRK15484 lipopolysaccharide 1, 96.2 0.053 1.1E-06 53.1 11.7 82 324-418 257-346 (380)
113 TIGR02918 accessory Sec system 96.0 1.3 2.8E-05 45.0 20.8 88 324-417 376-468 (500)
114 cd03825 GT1_wcfI_like This fam 95.9 0.089 1.9E-06 50.5 11.6 80 325-418 245-332 (365)
115 TIGR02149 glgA_Coryne glycogen 95.2 0.12 2.5E-06 50.5 9.7 82 329-418 266-354 (388)
116 COG3914 Spy Predicted O-linked 95.1 0.18 4E-06 50.3 10.2 123 257-391 427-560 (620)
117 PF13579 Glyco_trans_4_4: Glyc 94.3 0.089 1.9E-06 43.6 5.3 95 13-140 7-103 (160)
118 KOG4626 O-linked N-acetylgluco 94.2 0.21 4.6E-06 50.3 8.3 122 257-392 756-888 (966)
119 cd03813 GT1_like_3 This family 94.2 0.56 1.2E-05 47.4 11.8 82 324-418 354-444 (475)
120 PF12000 Glyco_trans_4_3: Gkyc 93.7 0.82 1.8E-05 39.0 10.0 95 22-141 1-96 (171)
121 PHA01633 putative glycosyl tra 91.6 4.5 9.7E-05 38.7 13.1 82 325-415 202-306 (335)
122 PRK10017 colanic acid biosynth 91.3 2.3 5E-05 42.2 11.1 154 249-417 224-393 (426)
123 cd01635 Glycosyltransferase_GT 88.9 1.8 3.8E-05 38.0 7.5 51 323-373 160-216 (229)
124 TIGR02095 glgA glycogen/starch 88.7 2.8 6E-05 42.3 9.6 132 261-415 292-436 (473)
125 TIGR02193 heptsyl_trn_I lipopo 88.6 3.1 6.7E-05 39.5 9.4 143 251-414 171-319 (319)
126 PRK09814 beta-1,6-galactofuran 88.0 0.9 2E-05 43.5 5.3 76 324-413 207-297 (333)
127 PF13477 Glyco_trans_4_2: Glyc 88.0 7.9 0.00017 31.3 10.4 90 13-140 13-106 (139)
128 cd03791 GT1_Glycogen_synthase_ 87.4 2.9 6.2E-05 42.1 8.8 134 260-415 296-441 (476)
129 COG0763 LpxB Lipid A disacchar 87.3 18 0.00038 35.0 13.2 186 205-417 144-345 (381)
130 PRK00654 glgA glycogen synthas 86.9 4.5 9.8E-05 40.7 9.8 132 261-415 283-427 (466)
131 PRK14098 glycogen synthase; Pr 85.8 6.6 0.00014 39.9 10.4 132 261-414 308-449 (489)
132 PRK15490 Vi polysaccharide bio 84.3 54 0.0012 33.8 18.9 62 324-392 455-521 (578)
133 PF13524 Glyco_trans_1_2: Glyc 79.9 5.1 0.00011 29.9 5.4 56 349-419 9-65 (92)
134 PRK14099 glycogen synthase; Pr 77.7 16 0.00034 37.1 9.6 70 341-417 368-448 (485)
135 COG1817 Uncharacterized protei 75.1 28 0.0006 32.7 9.4 103 6-142 9-113 (346)
136 PRK10964 ADP-heptose:LPS hepto 72.3 18 0.00038 34.3 8.1 137 259-415 178-321 (322)
137 PRK10125 putative glycosyl tra 71.9 19 0.00041 35.5 8.4 44 343-392 307-354 (405)
138 cd03791 GT1_Glycogen_synthase_ 71.4 31 0.00068 34.6 10.0 20 14-33 23-42 (476)
139 cd03789 GT1_LPS_heptosyltransf 71.2 18 0.0004 33.4 7.7 39 4-42 7-47 (279)
140 COG0438 RfaG Glycosyltransfera 71.2 56 0.0012 30.0 11.3 133 261-417 200-343 (381)
141 PF13439 Glyco_transf_4: Glyco 70.9 4.4 9.6E-05 33.8 3.3 27 8-34 13-39 (177)
142 cd07037 TPP_PYR_MenD Pyrimidin 70.4 19 0.0004 30.5 6.8 27 343-369 61-93 (162)
143 TIGR03713 acc_sec_asp1 accesso 70.4 2.7 5.9E-05 42.9 2.0 75 324-417 409-489 (519)
144 PF06258 Mito_fiss_Elm1: Mitoc 69.9 58 0.0013 30.9 10.7 79 333-414 221-309 (311)
145 PF05159 Capsule_synth: Capsul 69.2 24 0.00051 32.5 7.9 42 326-370 185-226 (269)
146 PLN02470 acetolactate synthase 68.1 34 0.00074 35.6 9.7 91 265-369 2-109 (585)
147 PHA01630 putative group 1 glyc 67.0 57 0.0012 31.2 10.3 40 330-371 196-242 (331)
148 cd07039 TPP_PYR_POX Pyrimidine 66.9 78 0.0017 26.7 10.3 28 342-369 63-96 (164)
149 TIGR02095 glgA glycogen/starch 64.6 47 0.001 33.4 9.7 21 14-34 24-44 (473)
150 cd07035 TPP_PYR_POX_like Pyrim 63.7 36 0.00078 28.2 7.4 28 343-370 60-93 (155)
151 PLN02316 synthase/transferase 63.5 65 0.0014 35.8 10.8 83 325-416 901-998 (1036)
152 cd07038 TPP_PYR_PDC_IPDC_like 60.7 1E+02 0.0022 25.9 10.2 27 343-369 60-92 (162)
153 TIGR02919 accessory Sec system 60.6 75 0.0016 31.8 10.0 81 324-418 328-413 (438)
154 TIGR02400 trehalose_OtsA alpha 60.5 22 0.00049 35.7 6.4 74 329-417 341-423 (456)
155 PLN02939 transferase, transfer 60.0 64 0.0014 35.4 9.8 83 324-415 837-930 (977)
156 cd01840 SGNH_hydrolase_yrhL_li 59.7 23 0.00049 29.3 5.4 39 258-297 50-88 (150)
157 smart00851 MGS MGS-like domain 59.5 61 0.0013 24.1 7.2 28 13-42 2-29 (90)
158 TIGR02201 heptsyl_trn_III lipo 57.8 45 0.00098 31.9 7.8 99 258-368 180-285 (344)
159 COG4370 Uncharacterized protei 57.7 32 0.00069 32.2 6.2 79 330-419 301-382 (412)
160 COG0801 FolK 7,8-dihydro-6-hyd 56.2 22 0.00047 30.0 4.5 36 261-296 3-38 (160)
161 PRK06456 acetolactate synthase 54.5 62 0.0013 33.5 8.7 28 342-369 68-101 (572)
162 cd03793 GT1_Glycogen_synthase_ 54.4 33 0.00071 35.4 6.3 80 334-416 468-552 (590)
163 COG0496 SurE Predicted acid ph 53.3 56 0.0012 29.8 7.0 26 13-39 16-41 (252)
164 PF02776 TPP_enzyme_N: Thiamin 50.8 1.5E+02 0.0033 25.0 9.4 73 342-419 64-153 (172)
165 PRK10422 lipopolysaccharide co 50.2 62 0.0013 31.1 7.4 98 259-368 183-287 (352)
166 cd03788 GT1_TPS Trehalose-6-Ph 50.2 23 0.00049 35.6 4.5 75 328-417 345-428 (460)
167 PRK08155 acetolactate synthase 49.5 1.3E+02 0.0028 31.1 10.1 28 342-369 76-109 (564)
168 PF01075 Glyco_transf_9: Glyco 48.8 48 0.001 29.8 6.1 99 258-368 104-208 (247)
169 PRK10916 ADP-heptose:LPS hepto 46.1 50 0.0011 31.7 6.1 144 258-417 179-346 (348)
170 KOG1250 Threonine/serine dehyd 45.8 3E+02 0.0066 27.0 12.4 64 345-418 247-318 (457)
171 PF02951 GSH-S_N: Prokaryotic 45.5 20 0.00042 28.6 2.6 23 13-35 20-42 (119)
172 PRK07710 acetolactate synthase 45.4 1.3E+02 0.0028 31.2 9.3 28 342-369 78-111 (571)
173 PF06506 PrpR_N: Propionate ca 45.3 36 0.00078 29.1 4.4 70 339-415 31-123 (176)
174 PF09001 DUF1890: Domain of un 45.2 13 0.00029 30.2 1.5 30 13-42 16-45 (139)
175 cd01424 MGS_CPS_II Methylglyox 44.3 1.5E+02 0.0032 22.9 8.3 83 9-138 11-100 (110)
176 cd02067 B12-binding B12 bindin 44.2 25 0.00054 27.7 3.1 33 2-34 5-37 (119)
177 PRK08322 acetolactate synthase 42.3 1.4E+02 0.003 30.7 9.0 28 342-369 63-96 (547)
178 PRK06276 acetolactate synthase 41.7 1.6E+02 0.0036 30.6 9.4 28 342-369 63-96 (586)
179 TIGR00715 precor6x_red precorr 41.3 1.7E+02 0.0038 26.8 8.4 24 13-36 12-35 (256)
180 cd01635 Glycosyltransferase_GT 41.3 32 0.0007 29.7 3.7 26 6-31 12-37 (229)
181 PRK02797 4-alpha-L-fucosyltran 41.2 81 0.0018 29.8 6.2 78 328-415 211-293 (322)
182 PF04413 Glycos_transf_N: 3-De 40.9 1.8E+02 0.0038 25.2 8.1 36 6-41 30-68 (186)
183 PF04127 DFP: DNA / pantothena 40.5 28 0.0006 30.2 2.9 21 14-34 33-53 (185)
184 PF08323 Glyco_transf_5: Starc 39.8 23 0.0005 32.2 2.5 21 14-34 23-43 (245)
185 PRK06270 homoserine dehydrogen 39.7 2.6E+02 0.0057 26.8 9.9 58 333-391 80-149 (341)
186 PF01975 SurE: Survival protei 38.3 32 0.0007 30.1 3.1 27 13-39 16-42 (196)
187 PF09314 DUF1972: Domain of un 37.9 58 0.0013 28.2 4.5 38 15-64 25-62 (185)
188 PRK07418 acetolactate synthase 37.8 2.3E+02 0.0049 29.8 9.8 27 342-368 85-117 (616)
189 cd01421 IMPCH Inosine monophos 37.2 1.6E+02 0.0035 25.5 7.0 36 13-64 13-48 (187)
190 PRK07525 sulfoacetaldehyde ace 37.0 2.4E+02 0.0051 29.4 9.7 28 342-369 68-101 (588)
191 cd07025 Peptidase_S66 LD-Carbo 36.3 72 0.0016 29.7 5.3 30 270-299 44-73 (282)
192 COG0299 PurN Folate-dependent 36.1 3E+02 0.0065 24.1 10.8 29 111-140 29-57 (200)
193 PF02558 ApbA: Ketopantoate re 35.5 40 0.00086 27.7 3.1 28 15-42 12-39 (151)
194 PRK08979 acetolactate synthase 35.3 2.3E+02 0.005 29.4 9.3 28 342-369 67-100 (572)
195 PRK08527 acetolactate synthase 35.2 2.3E+02 0.005 29.3 9.3 28 342-369 66-99 (563)
196 TIGR00661 MJ1255 conserved hyp 34.6 1.7E+02 0.0037 27.6 7.6 33 336-368 87-119 (321)
197 PRK11269 glyoxylate carboligas 34.2 1.5E+02 0.0033 30.9 7.8 27 343-369 69-101 (591)
198 PRK08266 hypothetical protein; 34.2 2.1E+02 0.0045 29.4 8.7 27 343-369 69-101 (542)
199 PRK08199 thiamine pyrophosphat 33.9 1.7E+02 0.0037 30.2 8.1 27 342-368 71-103 (557)
200 TIGR02195 heptsyl_trn_II lipop 33.3 2E+02 0.0043 27.2 8.0 96 258-368 173-276 (334)
201 PRK14092 2-amino-4-hydroxy-6-h 33.3 79 0.0017 26.8 4.5 31 257-287 5-35 (163)
202 PF06792 UPF0261: Uncharacteri 33.0 1.6E+02 0.0035 28.9 7.0 96 258-373 184-281 (403)
203 COG4081 Uncharacterized protei 32.8 29 0.00064 27.8 1.7 29 11-39 19-47 (148)
204 CHL00099 ilvB acetohydroxyacid 32.4 1.8E+02 0.0039 30.3 8.0 28 342-369 76-109 (585)
205 PF13450 NAD_binding_8: NAD(P) 32.1 51 0.0011 23.1 2.7 21 14-34 9-29 (68)
206 PLN03063 alpha,alpha-trehalose 31.6 1.2E+02 0.0025 33.1 6.5 71 331-415 363-442 (797)
207 TIGR00118 acolac_lg acetolacta 31.5 2.7E+02 0.0059 28.7 9.1 27 343-369 65-97 (558)
208 PF09334 tRNA-synt_1g: tRNA sy 31.5 39 0.00084 33.2 2.7 33 7-39 16-52 (391)
209 PRK07282 acetolactate synthase 31.2 2.5E+02 0.0053 29.1 8.7 28 342-369 73-106 (566)
210 PRK06882 acetolactate synthase 31.1 3E+02 0.0064 28.5 9.3 28 342-369 67-100 (574)
211 cd07062 Peptidase_S66_mccF_lik 30.8 1E+02 0.0022 29.1 5.3 30 270-299 48-77 (308)
212 TIGR00745 apbA_panE 2-dehydrop 30.7 45 0.00097 30.9 3.0 27 15-41 5-31 (293)
213 PF08660 Alg14: Oligosaccharid 30.4 1.7E+02 0.0036 25.0 6.1 33 2-34 3-37 (170)
214 PF11071 DUF2872: Protein of u 30.1 2.5E+02 0.0055 22.8 6.4 33 334-368 66-106 (141)
215 PF00070 Pyr_redox: Pyridine n 30.1 74 0.0016 22.8 3.5 22 13-34 11-32 (80)
216 TIGR00421 ubiX_pad polyprenyl 29.9 53 0.0012 28.3 3.0 28 13-40 15-42 (181)
217 COG3660 Predicted nucleoside-d 29.8 4.4E+02 0.0095 24.4 8.7 37 330-368 234-271 (329)
218 PF02142 MGS: MGS-like domain 29.6 40 0.00087 25.4 2.0 28 13-42 2-29 (95)
219 PRK06466 acetolactate synthase 29.2 3.2E+02 0.0069 28.3 9.2 28 342-369 67-100 (574)
220 COG2179 Predicted hydrolase of 29.1 2.8E+02 0.0061 23.6 6.9 47 95-143 95-141 (175)
221 COG1484 DnaC DNA replication p 29.1 48 0.001 30.3 2.8 38 5-42 114-151 (254)
222 COG2894 MinD Septum formation 29.0 2.1E+02 0.0046 25.7 6.4 102 6-120 13-122 (272)
223 COG0299 PurN Folate-dependent 28.9 2.1E+02 0.0046 25.0 6.4 106 273-412 63-171 (200)
224 PRK06725 acetolactate synthase 28.8 2.7E+02 0.0059 28.8 8.6 28 342-369 77-110 (570)
225 COG1618 Predicted nucleotide k 28.7 2.4E+02 0.0051 24.1 6.4 31 5-35 14-44 (179)
226 PRK00654 glgA glycogen synthas 28.7 71 0.0015 32.1 4.2 31 3-33 12-43 (466)
227 TIGR03646 YtoQ_fam YtoQ family 28.6 2.5E+02 0.0053 22.9 6.1 34 333-368 68-109 (144)
228 PRK08305 spoVFB dipicolinate s 28.5 48 0.001 29.0 2.5 33 7-39 15-48 (196)
229 COG1797 CobB Cobyrinic acid a, 28.5 3.8E+02 0.0082 26.7 8.7 31 5-35 10-41 (451)
230 PF02310 B12-binding: B12 bind 28.5 76 0.0017 24.7 3.6 37 3-39 7-43 (121)
231 PRK02399 hypothetical protein; 28.5 2.4E+02 0.0053 27.7 7.4 94 258-371 185-280 (406)
232 COG0162 TyrS Tyrosyl-tRNA synt 28.2 59 0.0013 32.0 3.3 28 6-34 47-74 (401)
233 PRK06048 acetolactate synthase 28.1 3.5E+02 0.0075 28.0 9.2 27 343-369 71-103 (561)
234 TIGR00355 purH phosphoribosyla 28.1 2.8E+02 0.0061 28.2 7.9 36 13-64 13-48 (511)
235 cd03416 CbiX_SirB_N Sirohydroc 27.5 1.6E+02 0.0035 22.1 5.1 27 261-287 2-28 (101)
236 PLN02470 acetolactate synthase 27.2 5.3E+02 0.012 26.8 10.4 62 344-415 475-545 (585)
237 cd03818 GT1_ExpC_like This fam 27.2 2.8E+02 0.0062 26.8 8.1 28 272-299 8-35 (396)
238 PRK07064 hypothetical protein; 27.2 4.5E+02 0.0098 26.9 9.8 28 342-369 66-99 (544)
239 PF07429 Glyco_transf_56: 4-al 27.1 1.9E+02 0.0041 27.8 6.3 84 322-415 243-332 (360)
240 cd03412 CbiK_N Anaerobic cobal 27.0 1.1E+02 0.0023 24.6 4.2 37 260-296 2-40 (127)
241 COG2159 Predicted metal-depend 26.9 1.8E+02 0.004 27.2 6.3 87 247-352 116-202 (293)
242 PRK07979 acetolactate synthase 26.7 4E+02 0.0087 27.6 9.4 28 342-369 67-100 (574)
243 TIGR01675 plant-AP plant acid 26.4 71 0.0015 28.7 3.2 26 10-35 122-147 (229)
244 PRK08978 acetolactate synthase 26.3 2.5E+02 0.0054 28.9 7.7 27 343-369 64-96 (548)
245 PRK04885 ppnK inorganic polyph 25.6 1.2E+02 0.0027 27.9 4.8 28 343-370 36-69 (265)
246 PF02441 Flavoprotein: Flavopr 25.4 42 0.0009 27.0 1.5 37 6-42 9-45 (129)
247 cd00561 CobA_CobO_BtuR ATP:cor 25.0 4.2E+02 0.009 22.3 8.4 32 2-33 8-42 (159)
248 PRK12315 1-deoxy-D-xylulose-5- 25.0 2.9E+02 0.0064 28.8 7.9 52 348-414 524-580 (581)
249 PRK07586 hypothetical protein; 24.8 3.7E+02 0.008 27.3 8.6 27 343-369 65-97 (514)
250 PRK02261 methylaspartate mutas 24.8 78 0.0017 25.9 3.0 38 2-39 9-46 (137)
251 PF07905 PucR: Purine cataboli 24.8 2.5E+02 0.0054 22.2 5.9 45 246-294 33-78 (123)
252 COG2910 Putative NADH-flavin r 24.7 68 0.0015 27.8 2.6 26 6-33 8-33 (211)
253 COG3245 CycB Cytochrome c5 [En 24.7 51 0.0011 26.0 1.7 54 359-414 60-122 (126)
254 KOG4175 Tryptophan synthase al 24.6 98 0.0021 27.1 3.6 42 251-292 8-49 (268)
255 PF00933 Glyco_hydro_3: Glycos 24.6 1.1E+02 0.0024 28.7 4.4 110 278-415 184-298 (299)
256 PRK00881 purH bifunctional pho 24.5 4E+02 0.0086 27.2 8.3 36 13-64 17-52 (513)
257 TIGR03254 oxalate_oxc oxalyl-C 24.2 4.7E+02 0.01 26.9 9.3 28 342-369 65-98 (554)
258 cd03409 Chelatase_Class_II Cla 24.0 1.8E+02 0.004 21.6 4.9 27 261-287 2-29 (101)
259 cd03784 GT1_Gtf_like This fami 24.0 3.1E+02 0.0068 26.5 7.7 37 260-298 2-38 (401)
260 COG2874 FlaH Predicted ATPases 23.8 2.2E+02 0.0047 25.5 5.6 27 9-35 41-67 (235)
261 COG1255 Uncharacterized protei 23.7 86 0.0019 24.8 2.8 20 12-31 24-43 (129)
262 PRK07449 2-succinyl-5-enolpyru 23.6 2.2E+02 0.0047 29.5 6.7 27 343-369 73-105 (568)
263 TIGR00173 menD 2-succinyl-5-en 23.5 1.8E+02 0.0039 28.9 5.9 26 343-368 64-95 (432)
264 PRK08057 cobalt-precorrin-6x r 23.5 4.9E+02 0.011 23.7 8.2 23 14-36 15-37 (248)
265 COG0028 IlvB Thiamine pyrophos 23.5 1.5E+02 0.0033 30.6 5.5 29 341-369 63-97 (550)
266 PRK08978 acetolactate synthase 23.4 7.7E+02 0.017 25.3 10.7 62 343-415 449-513 (548)
267 COG0859 RfaF ADP-heptose:LPS h 23.3 2.1E+02 0.0046 27.2 6.2 141 259-417 175-333 (334)
268 PRK09620 hypothetical protein; 23.2 76 0.0016 28.6 2.9 26 6-33 27-52 (229)
269 PF03720 UDPG_MGDP_dh_C: UDP-g 23.2 91 0.002 24.0 3.0 31 11-41 17-47 (106)
270 PRK05920 aromatic acid decarbo 23.1 77 0.0017 28.0 2.8 32 10-41 16-47 (204)
271 PF08026 Antimicrobial_5: Bee 23.1 10 0.00023 22.5 -1.7 23 2-24 16-38 (39)
272 PF03853 YjeF_N: YjeF-related 23.0 79 0.0017 26.8 2.8 18 14-31 42-59 (169)
273 PRK06276 acetolactate synthase 23.0 8.3E+02 0.018 25.4 10.9 62 343-415 467-531 (586)
274 PF10093 DUF2331: Uncharacteri 23.0 1.6E+02 0.0036 28.6 5.2 40 325-367 245-287 (374)
275 TIGR02990 ectoine_eutA ectoine 22.9 4.3E+02 0.0093 23.9 7.7 23 10-32 105-128 (239)
276 PRK08617 acetolactate synthase 22.8 4.3E+02 0.0093 27.2 8.7 27 343-369 68-100 (552)
277 PRK06965 acetolactate synthase 22.5 4.1E+02 0.0088 27.7 8.5 27 343-369 85-117 (587)
278 PTZ00445 p36-lilke protein; Pr 22.4 86 0.0019 27.8 2.9 29 8-36 74-103 (219)
279 TIGR02418 acolac_catab acetola 22.4 4.6E+02 0.0099 26.9 8.8 27 343-369 62-94 (539)
280 PRK06222 ferredoxin-NADP(+) re 22.3 1.1E+02 0.0024 28.3 3.9 26 10-35 110-135 (281)
281 cd00532 MGS-like MGS-like doma 22.2 1.1E+02 0.0025 23.8 3.4 30 11-42 12-41 (112)
282 TIGR00725 conserved hypothetic 22.1 3.1E+02 0.0067 23.0 6.2 39 332-370 82-123 (159)
283 COG2085 Predicted dinucleotide 22.0 88 0.0019 27.7 2.9 30 4-35 6-35 (211)
284 PLN02935 Bifunctional NADH kin 22.0 1.7E+02 0.0038 29.6 5.2 27 342-368 262-292 (508)
285 TIGR01498 folK 2-amino-4-hydro 21.9 1.1E+02 0.0025 24.6 3.4 27 262-288 1-27 (127)
286 TIGR03609 S_layer_CsaB polysac 21.8 5.3E+02 0.011 23.8 8.5 99 259-369 172-276 (298)
287 PF04244 DPRP: Deoxyribodipyri 21.8 97 0.0021 27.8 3.2 26 9-34 47-72 (224)
288 PF01380 SIS: SIS domain SIS d 21.7 1.8E+02 0.0039 22.7 4.6 39 4-42 60-98 (131)
289 PF00289 CPSase_L_chain: Carba 21.6 1.8E+02 0.004 22.7 4.4 73 273-359 10-89 (110)
290 TIGR02113 coaC_strep phosphopa 21.5 68 0.0015 27.6 2.1 35 6-40 9-43 (177)
291 cd03825 GT1_wcfI_like This fam 21.4 87 0.0019 29.5 3.1 29 7-35 13-41 (365)
292 PRK13982 bifunctional SbtC-lik 21.3 86 0.0019 31.6 3.1 21 14-34 286-306 (475)
293 TIGR00234 tyrS tyrosyl-tRNA sy 21.2 90 0.002 30.5 3.1 28 6-34 45-72 (377)
294 TIGR03272 methan_mark_6 putati 21.2 2E+02 0.0044 23.2 4.4 48 244-293 9-59 (132)
295 COG0143 MetG Methionyl-tRNA sy 21.0 96 0.0021 32.0 3.4 28 7-34 22-52 (558)
296 TIGR02398 gluc_glyc_Psyn gluco 21.0 4.1E+02 0.0089 27.0 7.8 79 326-419 364-451 (487)
297 PRK08327 acetolactate synthase 20.4 4.6E+02 0.0099 27.2 8.3 29 342-370 75-109 (569)
298 PF14626 RNase_Zc3h12a_2: Zc3h 20.1 97 0.0021 24.6 2.4 31 10-40 9-39 (122)
299 PF04558 tRNA_synt_1c_R1: Glut 20.1 78 0.0017 26.9 2.1 30 376-416 103-132 (164)
300 TIGR02720 pyruv_oxi_spxB pyruv 20.1 2.3E+02 0.005 29.4 6.0 27 343-369 64-96 (575)
301 PRK06932 glycerate dehydrogena 20.0 4.7E+02 0.01 24.7 7.7 101 259-411 148-248 (314)
302 TIGR01689 EcbF-BcbF capsule bi 20.0 1.3E+02 0.0029 24.2 3.4 25 12-36 28-52 (126)
303 PRK12474 hypothetical protein; 20.0 4.5E+02 0.0098 26.8 8.1 27 343-369 69-101 (518)
No 1
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=5.1e-68 Score=521.12 Aligned_cols=398 Identities=26% Similarity=0.391 Sum_probs=294.9
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACK 80 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~ 80 (422)
++|||++||++||++||++|++||+.|||++|+.+...+..... ...++|+|+.+++|+.++.+++.....+
T Consensus 11 l~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~--------~~~~~i~~~~lp~p~~dglp~~~~~~~~ 82 (472)
T PLN02670 11 MFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPS--------QLSSSITLVSFPLPSVPGLPSSAESSTD 82 (472)
T ss_pred EeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccc--------cCCCCeeEEECCCCccCCCCCCcccccc
Confidence 58999999999999999999999999999999987766543200 0113699999988775544443332222
Q ss_pred CCCcchhhH-HHhhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHH----hc
Q 039436 81 FPSHIIPCC-EASKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWE----RM 155 (422)
Q Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~----~~ 155 (422)
.......++ .+.+.+.+.++++++++ +++|||+|.++.|+.++|+++ |||++.|++++++....++.. ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~cvI~D~f~~wa~~vA~~~-gIP~~~f~~~~a~~~~~~~~~~~~~~~ 157 (472)
T PLN02670 83 VPYTKQQLLKKAFDLLEPPLTTFLETS----KPDWIIYDYASHWLPSIAAEL-GISKAFFSLFTAATLSFIGPPSSLMEG 157 (472)
T ss_pred cchhhHHHHHHHHHHhHHHHHHHHHhC----CCcEEEECCcchhHHHHHHHc-CCCEEEEehhhHHHHHHHhhhHhhhhc
Confidence 211111233 34667888888888765 467999999999999999999 999999999888665554321 11
Q ss_pred CCCCCCCCC--C------------CCCCCCCCCCCC-C-chhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhh
Q 039436 156 GNPNLNEAS--G------------LIPKDVPSLEGC-F-TSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKAT 219 (422)
Q Consensus 156 ~~~~~~~~~--~------------l~~~~lp~~~~~-~-~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~ 219 (422)
+......+. . ++..++|.+... . .......+.+......+++++++|||.+||+.+++++++.+
T Consensus 158 ~~~~~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~ 237 (472)
T PLN02670 158 GDLRSTAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLY 237 (472)
T ss_pred ccCCCccccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhh
Confidence 110000000 0 111133322110 0 11112223334445678899999999999999999997653
Q ss_pred hccCCcccccCCCCcCCCC-CCCCC---CCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEE
Q 039436 220 VAETFNHWALGPFNPVTLP-NKGGS---NGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVL 295 (422)
Q Consensus 220 ~~~~~~~~~VGPl~~~~~~-~~~~~---~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~ 295 (422)
++++|+|||+++.... ..... ..+++|.+|||++++++||||||||+..++.+++.+++.||+.++++|||++
T Consensus 238 ---~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~ 314 (472)
T PLN02670 238 ---RKPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVL 314 (472)
T ss_pred ---CCCeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 3689999999753111 10000 1125799999999889999999999999999999999999999999999999
Q ss_pred ecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchh
Q 039436 296 RDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQP 375 (422)
Q Consensus 296 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~ 375 (422)
+...... .+....+|++|.++++++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+
T Consensus 315 r~~~~~~----~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~ 390 (472)
T PLN02670 315 RNEPGTT----QNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQG 390 (472)
T ss_pred cCCcccc----cchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccH
Confidence 8632110 011235899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcCCccc
Q 039436 376 RNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMASKEGD 420 (422)
Q Consensus 376 ~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~ 420 (422)
.||+++++ +|+|+.+...+ +.+.+++++|+++|+++|.+++|+
T Consensus 391 ~Na~~v~~-~g~Gv~l~~~~-~~~~~~~e~i~~av~~vm~~~~g~ 433 (472)
T PLN02670 391 LNTRLLHG-KKLGLEVPRDE-RDGSFTSDSVAESVRLAMVDDAGE 433 (472)
T ss_pred HHHHHHHH-cCeeEEeeccc-cCCcCcHHHHHHHHHHHhcCcchH
Confidence 99999987 89999996311 123589999999999999887554
No 2
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=1.1e-67 Score=517.99 Aligned_cols=387 Identities=21% Similarity=0.297 Sum_probs=286.9
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACK 80 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~ 80 (422)
|+|||++||++||++|||+|+++|++|||++++.+...+++. + .. .++++|..+++|.....+++.....+
T Consensus 9 lvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~----~--~~---~~~i~~~~i~lP~~dGLP~g~e~~~~ 79 (446)
T PLN00414 9 MYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPL----N--LF---PDSIVFEPLTLPPVDGLPFGAETASD 79 (446)
T ss_pred EecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhccc----c--cC---CCceEEEEecCCCcCCCCCccccccc
Confidence 589999999999999999999999999999999877666543 0 01 12588877766643333333222222
Q ss_pred CCCcchhhH-HHhhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhcCCCC
Q 039436 81 FPSHIIPCC-EASKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERMGNPN 159 (422)
Q Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (422)
........+ .+...+.+.++++++. .+++|||+|. ++|+.++|+++ |||++.|++++++...++.+......
T Consensus 80 l~~~~~~~~~~a~~~l~~~l~~~L~~----~~p~cVV~D~-~~wa~~vA~~l-gIP~~~F~~~~a~~~~~~~~~~~~~~- 152 (446)
T PLN00414 80 LPNSTKKPIFDAMDLLRDQIEAKVRA----LKPDLIFFDF-VHWVPEMAKEF-GIKSVNYQIISAACVAMVLAPRAELG- 152 (446)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEECC-chhHHHHHHHh-CCCEEEEecHHHHHHHHHhCcHhhcC-
Confidence 221112222 3345566666666644 3578999995 89999999999 99999999999876665543211000
Q ss_pred CCCCCCCC-------CCCCCCCCCCCchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhhhccCCcccccCCC
Q 039436 160 LNEASGLI-------PKDVPSLEGCFTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKATVAETFNHWALGPF 232 (422)
Q Consensus 160 ~~~~~~l~-------~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~~~~~~~~~~VGPl 232 (422)
.+.++++ ..+.+ +..... .....+.+..+...+++++++|||.+||+.++++++..+ ++++|+|||+
T Consensus 153 -~~~pg~p~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~---~~~v~~VGPl 226 (446)
T PLN00414 153 -FPPPDYPLSKVALRGHDAN-VCSLFA-NSHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQC---QRKVLLTGPM 226 (446)
T ss_pred -CCCCCCCCCcCcCchhhcc-cchhhc-ccHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhc---CCCeEEEccc
Confidence 0001111 11111 000000 011333344456678999999999999999999987753 3589999999
Q ss_pred CcCCCCCCCCCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhccc
Q 039436 233 NPVTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAE 312 (422)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 312 (422)
++.... ......+++|.+|||+|+++|||||||||+...+.+++.+++.+|+.++.+|+|+++...... ...+.
T Consensus 227 ~~~~~~-~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~-----~~~~~ 300 (446)
T PLN00414 227 LPEPQN-KSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSS-----TVQEA 300 (446)
T ss_pred CCCccc-ccCcccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcc-----cchhh
Confidence 753211 111122457999999999999999999999999999999999999999999999998742111 01246
Q ss_pred CChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEe
Q 039436 313 LPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMA 392 (422)
Q Consensus 313 lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~ 392 (422)
+|++|.++++++|+++.+|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++++++|+|+.+.
T Consensus 301 lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~ 380 (446)
T PLN00414 301 LPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQ 380 (446)
T ss_pred CChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999986699999996
Q ss_pred eccccccccCHHHHHHHHHHHhcCC
Q 039436 393 DWARRDEIVTSNVIENAVKRLMASK 417 (422)
Q Consensus 393 ~~~~~~~~~~~~~l~~av~~~l~~~ 417 (422)
+. +.+.+++++|+++|+++|+++
T Consensus 381 ~~--~~~~~~~~~i~~~v~~~m~~~ 403 (446)
T PLN00414 381 RE--DSGWFSKESLRDTVKSVMDKD 403 (446)
T ss_pred cc--cCCccCHHHHHHHHHHHhcCC
Confidence 21 113589999999999999864
No 3
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=6e-67 Score=509.63 Aligned_cols=388 Identities=20% Similarity=0.263 Sum_probs=288.9
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACK 80 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~ 80 (422)
++|||++||++||++||+.|+++|+.|||++|+.+...+.+. . .. +....+++.++|.++ +.+++.+...+
T Consensus 10 l~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~-~-----~~-~~~~~v~~~~~p~~~--glp~g~e~~~~ 80 (453)
T PLN02764 10 MYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHL-N-----LF-PHNIVFRSVTVPHVD--GLPVGTETVSE 80 (453)
T ss_pred EECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhccc-c-----cC-CCCceEEEEECCCcC--CCCCccccccc
Confidence 589999999999999999999999999999999876555432 0 00 000125555554333 23333222222
Q ss_pred CCCcchh-hHHHhhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhcCCC-
Q 039436 81 FPSHIIP-CCEASKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERMGNP- 158 (422)
Q Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~~~~- 158 (422)
....... +..+...+.+.++++++++ +++|||+|. +.|+.++|+++ |||++.|++++++...++... .+..
T Consensus 81 ~~~~~~~~~~~a~~~~~~~~~~~l~~~----~~~~iV~D~-~~w~~~vA~~~-gIP~~~f~~~~a~~~~~~~~~-~~~~~ 153 (453)
T PLN02764 81 IPVTSADLLMSAMDLTRDQVEVVVRAV----EPDLIFFDF-AHWIPEVARDF-GLKTVKYVVVSASTIASMLVP-GGELG 153 (453)
T ss_pred CChhHHHHHHHHHHHhHHHHHHHHHhC----CCCEEEECC-chhHHHHHHHh-CCCEEEEEcHHHHHHHHHhcc-cccCC
Confidence 2222222 3344567778888888774 467999995 89999999999 999999999998766665431 1110
Q ss_pred CCCCCC-----CCCCCCCCCCCC----CCchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhhhccCCccccc
Q 039436 159 NLNEAS-----GLIPKDVPSLEG----CFTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKATVAETFNHWAL 229 (422)
Q Consensus 159 ~~~~~~-----~l~~~~lp~~~~----~~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~~~~~~~~~~V 229 (422)
...++. .++..++|.+.. .....+..++.+......+++++++|||.+||+.+++++++.. ++++|+|
T Consensus 154 ~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~---~~~v~~V 230 (453)
T PLN02764 154 VPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHC---RKKVLLT 230 (453)
T ss_pred CCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhc---CCcEEEe
Confidence 001111 123334443211 0111233444444456778899999999999999999987642 3689999
Q ss_pred CCCCcCCCCCCCCCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchh
Q 039436 230 GPFNPVTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVR 309 (422)
Q Consensus 230 GPl~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 309 (422)
||+++.... . ...+++|.+|||+|+++|||||||||+..++.+++.+++.+|+.++.+|+|+++...... +.
T Consensus 231 GPL~~~~~~--~-~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~-----~~ 302 (453)
T PLN02764 231 GPVFPEPDK--T-RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSS-----TI 302 (453)
T ss_pred ccCccCccc--c-ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCc-----ch
Confidence 999753211 1 113468999999999999999999999999999999999999999999999999642111 11
Q ss_pred cccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEE
Q 039436 310 RAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGL 389 (422)
Q Consensus 310 ~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~ 389 (422)
...+|++|.++++++|+++.+|+||..||+|+++++|||||||||++||+++|||||+||++.||+.||+++++.+|+|+
T Consensus 303 ~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv 382 (453)
T PLN02764 303 QEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSV 382 (453)
T ss_pred hhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEE
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999976689999
Q ss_pred EEeeccccccccCHHHHHHHHHHHhcCC
Q 039436 390 VMADWARRDEIVTSNVIENAVKRLMASK 417 (422)
Q Consensus 390 ~~~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (422)
.+... +.+.+++++|+++|+++|+++
T Consensus 383 ~~~~~--~~~~~~~e~i~~av~~vm~~~ 408 (453)
T PLN02764 383 EVARE--ETGWFSKESLRDAINSVMKRD 408 (453)
T ss_pred Eeccc--cCCccCHHHHHHHHHHHhcCC
Confidence 98520 013689999999999999874
No 4
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=8.4e-67 Score=515.88 Aligned_cols=399 Identities=26% Similarity=0.453 Sum_probs=297.5
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACK 80 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~ 80 (422)
++|||++||++||++|||+|+++|+.|||++|+.+.+.+++.. ...++++++.+++|.....+++.....+
T Consensus 14 l~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~---------~~~~~i~~~~lp~P~~~~lPdG~~~~~~ 84 (477)
T PLN02863 14 VFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLL---------SKHPSIETLVLPFPSHPSIPSGVENVKD 84 (477)
T ss_pred EecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhc---------ccCCCeeEEeCCCCCcCCCCCCCcChhh
Confidence 5899999999999999999999999999999998877776541 1124689988887765444444333222
Q ss_pred CCCcchh-hHHHhhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhcCCCC
Q 039436 81 FPSHIIP-CCEASKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERMGNPN 159 (422)
Q Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (422)
....... ++.+...+.+.+.++++++. .+++|||+|.+++|+.++|+++ |||++.|++++++.+..+++.....+.
T Consensus 85 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~--~~p~cvI~D~f~~Wa~dVA~e~-GIP~~~F~t~sA~~~~~~~~~~~~~~~ 161 (477)
T PLN02863 85 LPPSGFPLMIHALGELYAPLLSWFRSHP--SPPVAIISDMFLGWTQNLACQL-GIRRFVFSPSGAMALSIMYSLWREMPT 161 (477)
T ss_pred cchhhHHHHHHHHHHhHHHHHHHHHhCC--CCCeEEEEcCchHhHHHHHHHc-CCCEEEEeccCHHHHHHHHHHhhcccc
Confidence 2222222 33446677788888887642 3568999999999999999999 999999999998776665543221110
Q ss_pred ----C----------CCC-CCCCCCCCCCCCC-C-CchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhhhcc
Q 039436 160 ----L----------NEA-SGLIPKDVPSLEG-C-FTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKATVAE 222 (422)
Q Consensus 160 ----~----------~~~-~~l~~~~lp~~~~-~-~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~~~~ 222 (422)
. .++ ..++..++|.+.. . ....+.+.+.+......+++++++|||.+||+.+++++++.+ .
T Consensus 162 ~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~--~ 239 (477)
T PLN02863 162 KINPDDQNEILSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKEL--G 239 (477)
T ss_pred cccccccccccccCCCCCCCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhc--C
Confidence 0 000 1122233333211 0 111233344444444557788999999999999999998754 1
Q ss_pred CCcccccCCCCcCCCCC----C---CCCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEE
Q 039436 223 TFNHWALGPFNPVTLPN----K---GGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVL 295 (422)
Q Consensus 223 ~~~~~~VGPl~~~~~~~----~---~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~ 295 (422)
.+++|+|||+++..... . ..+..+++|.+|||+++++|||||||||+...+.+++++++.||+.++++|||++
T Consensus 240 ~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~ 319 (477)
T PLN02863 240 HDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCV 319 (477)
T ss_pred CCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEE
Confidence 26899999997532110 0 0011245799999999989999999999999999999999999999999999999
Q ss_pred ecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchh
Q 039436 296 RDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQP 375 (422)
Q Consensus 296 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~ 375 (422)
+...... .....+|++|.++++++|+++.+|+||..||+|+++++|||||||||++||+++|||||+||+++||+
T Consensus 320 ~~~~~~~-----~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~ 394 (477)
T PLN02863 320 KEPVNEE-----SDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQF 394 (477)
T ss_pred CCCcccc-----cchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccch
Confidence 8543110 01235899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhc-CCccc
Q 039436 376 RNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMA-SKEGD 420 (422)
Q Consensus 376 ~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~-~~~~~ 420 (422)
.||++++++||+|+++.. + ....++++++.++|+++|. ++++|
T Consensus 395 ~na~~v~~~~gvG~~~~~-~-~~~~~~~~~v~~~v~~~m~~~~~~r 438 (477)
T PLN02863 395 VNASLLVDELKVAVRVCE-G-ADTVPDSDELARVFMESVSENQVER 438 (477)
T ss_pred hhHHHHHHhhceeEEecc-C-CCCCcCHHHHHHHHHHHhhccHHHH
Confidence 999998776899999952 1 1235799999999999994 44443
No 5
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=7.9e-67 Score=513.14 Aligned_cols=396 Identities=25% Similarity=0.413 Sum_probs=292.3
Q ss_pred CcccCCccCHHHHHHHHHHHH-hCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVL-SYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAAC 79 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~-~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~ 79 (422)
++|||++||++||++||++|+ ++|+.|||++|+.+...+.+.. . ..++|+++.+|+|+....++..
T Consensus 10 l~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~-------~--~~~~i~~~~lp~p~~~glp~~~---- 76 (481)
T PLN02992 10 MFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKF-------L--NSTGVDIVGLPSPDISGLVDPS---- 76 (481)
T ss_pred EeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhcc-------c--cCCCceEEECCCccccCCCCCC----
Confidence 589999999999999999998 7999999999998765553321 0 0136899988765543222111
Q ss_pred CCCCcchhhHHHhhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhc--CC
Q 039436 80 KFPSHIIPCCEASKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERM--GN 157 (422)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~--~~ 157 (422)
......+......+.+.++++++++. .+++|||+|.+++|+.++|+++ |||+++|++++++....+.+... ..
T Consensus 77 --~~~~~~~~~~~~~~~~~~~~~l~~~~--~~p~cvV~D~f~~Wa~dVA~el-gIP~v~F~t~sA~~~~~~~~~~~~~~~ 151 (481)
T PLN02992 77 --AHVVTKIGVIMREAVPTLRSKIAEMH--QKPTALIVDLFGTDALCLGGEF-NMLTYIFIASNARFLGVSIYYPTLDKD 151 (481)
T ss_pred --ccHHHHHHHHHHHhHHHHHHHHHhcC--CCCeEEEECCcchhHHHHHHHc-CCCEEEEecCcHHHHHHHHhhhhhccc
Confidence 11111122335567788888887753 2578999999999999999999 99999999998876554432211 10
Q ss_pred CC-C---------CCC-CCCCCCCCCCCCCCCchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHh-hhc--cC
Q 039436 158 PN-L---------NEA-SGLIPKDVPSLEGCFTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKA-TVA--ET 223 (422)
Q Consensus 158 ~~-~---------~~~-~~l~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~-~~~--~~ 223 (422)
.. . .++ ..++..++|.............+.+......+++++++|||.+||+.++++++.. ... ..
T Consensus 152 ~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~ 231 (481)
T PLN02992 152 IKEEHTVQRKPLAMPGCEPVRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVAR 231 (481)
T ss_pred cccccccCCCCcccCCCCccCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccC
Confidence 00 0 000 1122223332110111122344445556677899999999999999999988642 000 02
Q ss_pred CcccccCCCCcCCCCCCCCCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCC-
Q 039436 224 FNHWALGPFNPVTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGD- 302 (422)
Q Consensus 224 ~~~~~VGPl~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~- 302 (422)
+++|+|||+++... . ...+++|.+|||+++++|||||||||+..++.+++++++.||+.++++|||+++....+.
T Consensus 232 ~~v~~VGPl~~~~~---~-~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~ 307 (481)
T PLN02992 232 VPVYPIGPLCRPIQ---S-SKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSA 307 (481)
T ss_pred CceEEecCccCCcC---C-CcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCccccc
Confidence 57999999975321 1 124567999999999899999999999999999999999999999999999998532110
Q ss_pred ---ccc------cchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccc
Q 039436 303 ---VFN------GEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSD 373 (422)
Q Consensus 303 ---~~~------~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~D 373 (422)
... .+.....+|++|.+|++++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++|
T Consensus 308 ~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~D 387 (481)
T PLN02992 308 CSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAE 387 (481)
T ss_pred ccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccch
Confidence 000 00012358999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcCCcccC
Q 039436 374 QPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMASKEGDE 421 (422)
Q Consensus 374 q~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~ 421 (422)
|+.||+++++.+|+|+.++. ..+.+++++|+++|+++|.+++|++
T Consensus 388 Q~~na~~~~~~~g~gv~~~~---~~~~~~~~~l~~av~~vm~~~~g~~ 432 (481)
T PLN02992 388 QNMNAALLSDELGIAVRSDD---PKEVISRSKIEALVRKVMVEEEGEE 432 (481)
T ss_pred hHHHHHHHHHHhCeeEEecC---CCCcccHHHHHHHHHHHhcCCchHH
Confidence 99999999644999999972 1246899999999999999877653
No 6
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=1.1e-66 Score=509.78 Aligned_cols=404 Identities=27% Similarity=0.438 Sum_probs=290.2
Q ss_pred CcccCCccCHHHHHHHHHHHHhCC--CcEEE--EeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYN--IPVHY--VGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPN 76 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~G--h~Vt~--~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~ 76 (422)
++|||++||++||++||++|+++| +.||+ ++++.+...+.+.+. ......++|+|+.+|.+. ..+...
T Consensus 8 l~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~~~lp~~~---~~~~~~ 79 (451)
T PLN03004 8 LYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYIS-----SVSSSFPSITFHHLPAVT---PYSSSS 79 (451)
T ss_pred EeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhc-----cccCCCCCeEEEEcCCCC---CCCCcc
Confidence 589999999999999999999998 45555 555543333222110 000112469999886322 111111
Q ss_pred CCCCCCCcchh-hHHHhhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhc
Q 039436 77 AACKFPSHIIP-CCEASKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERM 155 (422)
Q Consensus 77 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~ 155 (422)
. . ..+... ++.....+.+.++++++++....+++|||+|.+++|+.++|+++ |||+++|++++++....+.+...
T Consensus 80 ~--~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~pv~cII~D~~~~Wa~~vA~~l-gIP~v~F~t~sA~~~~~~~~~~~ 155 (451)
T PLN03004 80 T--S-RHHHESLLLEILCFSNPSVHRTLFSLSRNFNVRAMIIDFFCTAVLDITADF-TFPVYFFYTSGAACLAFSFYLPT 155 (451)
T ss_pred c--c-ccCHHHHHHHHHHhhhHHHHHHHHhcCCCCCceEEEECCcchhHHHHHHHh-CCCEEEEeCHhHHHHHHHHHHHh
Confidence 1 1 112222 22345577888888888874332347999999999999999999 99999999999876666554321
Q ss_pred -C--CCC-C--------CCC-CCCCCCCCCCCCCCCchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhhhcc
Q 039436 156 -G--NPN-L--------NEA-SGLIPKDVPSLEGCFTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKATVAE 222 (422)
Q Consensus 156 -~--~~~-~--------~~~-~~l~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~~~~ 222 (422)
. .+. . .++ +.++..++|.+...........+.+......+++++++|||++||+.+++++++.+ .
T Consensus 156 ~~~~~~~~~~~~~~~v~iPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~--~ 233 (451)
T PLN03004 156 IDETTPGKNLKDIPTVHIPGVPPMKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEEL--C 233 (451)
T ss_pred ccccccccccccCCeecCCCCCCCChHHCchhhcCCchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcC--C
Confidence 1 000 0 010 01223334432211112233455555666778999999999999999999997643 1
Q ss_pred CCcccccCCCCcCCCCCCCCCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCC
Q 039436 223 TFNHWALGPFNPVTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGD 302 (422)
Q Consensus 223 ~~~~~~VGPl~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~ 302 (422)
.+++|+|||++............+.+|.+|||+++++|||||||||+..++.+++++++.||+.++++|||+++......
T Consensus 234 ~~~v~~vGPl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~ 313 (451)
T PLN03004 234 FRNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELE 313 (451)
T ss_pred CCCEEEEeeeccCccccccccchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccc
Confidence 25899999997422101111112456999999999999999999999999999999999999999999999999542100
Q ss_pred ccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHH
Q 039436 303 VFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLIT 382 (422)
Q Consensus 303 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~ 382 (422)
... ......+|++|.+|++++|+++.+|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||++++
T Consensus 314 ~~~-~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~ 392 (451)
T PLN03004 314 KTE-LDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIV 392 (451)
T ss_pred ccc-cchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHH
Confidence 000 0001248999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhcCeEEEEeeccccccccCHHHHHHHHHHHhcCCcccC
Q 039436 383 HLLKLGLVMADWARRDEIVTSNVIENAVKRLMASKEGDE 421 (422)
Q Consensus 383 ~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~ 421 (422)
+++|+|+.++.. +.+.+++++|+++|+++|+|++|++
T Consensus 393 ~~~g~g~~l~~~--~~~~~~~e~l~~av~~vm~~~~~r~ 429 (451)
T PLN03004 393 DEIKIAISMNES--ETGFVSSTEVEKRVQEIIGECPVRE 429 (451)
T ss_pred HHhCceEEecCC--cCCccCHHHHHHHHHHHhcCHHHHH
Confidence 768999999731 1236899999999999999887764
No 7
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=2.3e-66 Score=507.16 Aligned_cols=384 Identities=23% Similarity=0.418 Sum_probs=291.9
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACK 80 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~ 80 (422)
++|||++||++||++|||+|+++|+.|||++|+.+...+... ..++|+|+.++ ++ .++......
T Consensus 10 ~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~-----------~~~~i~~~~ip--dg--lp~~~~~~~- 73 (449)
T PLN02173 10 AVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLD-----------PSSPISIATIS--DG--YDQGGFSSA- 73 (449)
T ss_pred EecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccC-----------CCCCEEEEEcC--CC--CCCcccccc-
Confidence 589999999999999999999999999999999865544321 11368998885 32 222111111
Q ss_pred CCCcchhhHHH-hhhchHHHHHHHHHhccCCCe-eEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhc--C
Q 039436 81 FPSHIIPCCEA-SKHLRHPLATLLNTLSATARR-VVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERM--G 156 (422)
Q Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~~~-d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~--~ 156 (422)
.+...++.. ...+.+.++++++++....+| +|||+|.+++|+.++|+++ |||++.|++++++....+++... +
T Consensus 74 --~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~el-gIP~v~F~~~~a~~~~~~~~~~~~~~ 150 (449)
T PLN02173 74 --GSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREF-GLAAAPFFTQSCAVNYINYLSYINNG 150 (449)
T ss_pred --cCHHHHHHHHHHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHh-CCCEEEEechHHHHHHHHHhHHhccC
Confidence 122235544 457888999999886543356 7999999999999999999 99999999988766555443211 1
Q ss_pred -CCCCCCC-CCCCCCCCCCCCCC--CchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhhhccCCcccccCCC
Q 039436 157 -NPNLNEA-SGLIPKDVPSLEGC--FTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKATVAETFNHWALGPF 232 (422)
Q Consensus 157 -~~~~~~~-~~l~~~~lp~~~~~--~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~~~~~~~~~~VGPl 232 (422)
.....++ +.++..++|.+... ......+.+.+......+++++++|||++||+.+++++++. +++|+|||+
T Consensus 151 ~~~~~~pg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~-----~~v~~VGPl 225 (449)
T PLN02173 151 SLTLPIKDLPLLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV-----CPVLTIGPT 225 (449)
T ss_pred CccCCCCCCCCCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc-----CCeeEEccc
Confidence 1111111 11334556553211 12234444555566778899999999999999999988643 479999999
Q ss_pred CcCCC------CCCC-C---C--CCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCC
Q 039436 233 NPVTL------PNKG-G---S--NGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADR 300 (422)
Q Consensus 233 ~~~~~------~~~~-~---~--~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~ 300 (422)
++... .... . + ..++.|.+|||.++++|||||||||+...+.+++.+++.+| ++.+|+|+++...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~~- 302 (449)
T PLN02173 226 VPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRASE- 302 (449)
T ss_pred CchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEeccc-
Confidence 74310 0000 0 0 12346999999999999999999999999999999999999 7889999998642
Q ss_pred CCccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHH
Q 039436 301 GDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLL 380 (422)
Q Consensus 301 ~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~ 380 (422)
...+|++|.+++.++|+++.+|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||++
T Consensus 303 ---------~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~ 373 (449)
T PLN02173 303 ---------ESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKY 373 (449)
T ss_pred ---------hhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHH
Confidence 23588999999877788888999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcCCcccC
Q 039436 381 ITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMASKEGDE 421 (422)
Q Consensus 381 ~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~ 421 (422)
+++.||+|+.+... +....+++|+|+++|+++|.+++|++
T Consensus 374 v~~~~g~Gv~v~~~-~~~~~~~~e~v~~av~~vm~~~~~~~ 413 (449)
T PLN02173 374 IQDVWKVGVRVKAE-KESGIAKREEIEFSIKEVMEGEKSKE 413 (449)
T ss_pred HHHHhCceEEEeec-ccCCcccHHHHHHHHHHHhcCChHHH
Confidence 99878999999631 11224799999999999999887754
No 8
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=1.4e-66 Score=509.61 Aligned_cols=387 Identities=21% Similarity=0.286 Sum_probs=286.4
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACK 80 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~ 80 (422)
++|||++||++||++||++|+++||+|||+|++.+...+++. +. ...+++|..++++.....+++.....+
T Consensus 9 ~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~----~a-----~~~~i~~~~l~~p~~dgLp~g~~~~~~ 79 (442)
T PLN02208 9 MFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHH----NL-----FPDSIVFHPLTIPPVNGLPAGAETTSD 79 (442)
T ss_pred EecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhcc----cC-----CCCceEEEEeCCCCccCCCCCcccccc
Confidence 589999999999999999999999999999999887766543 10 012577887765522222222221111
Q ss_pred CCCcchhhH-HHhhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhcCC-C
Q 039436 81 FPSHIIPCC-EASKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERMGN-P 158 (422)
Q Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~~~-~ 158 (422)
.......++ .....+.+.++++++++ +++|||+| ++.|+.++|+++ |||++.|++++++... +.+..... .
T Consensus 80 l~~~l~~~~~~~~~~~~~~l~~~L~~~----~~~cVV~D-~~~wa~~vA~e~-giP~~~f~~~~a~~~~-~~~~~~~~~~ 152 (442)
T PLN02208 80 IPISMDNLLSEALDLTRDQVEAAVRAL----RPDLIFFD-FAQWIPEMAKEH-MIKSVSYIIVSATTIA-HTHVPGGKLG 152 (442)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhC----CCeEEEEC-CcHhHHHHHHHh-CCCEEEEEhhhHHHHH-HHccCccccC
Confidence 111222223 33556677777777654 56899999 689999999999 9999999999987543 22211111 0
Q ss_pred CCCCCC-----CCCCCCCCCCCCCCchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhhhccCCcccccCCCC
Q 039436 159 NLNEAS-----GLIPKDVPSLEGCFTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKATVAETFNHWALGPFN 233 (422)
Q Consensus 159 ~~~~~~-----~l~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~~~~~~~~~~VGPl~ 233 (422)
...++. .++..++|.+.. ....+..+..+..+...+++++++|||.+||+.+++++++.+ ++++++|||+.
T Consensus 153 ~~~pglp~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~---~~~v~~vGpl~ 228 (442)
T PLN02208 153 VPPPGYPSSKVLFRENDAHALAT-LSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQY---HKKVLLTGPMF 228 (442)
T ss_pred CCCCCCCCcccccCHHHcCcccc-cchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhc---CCCEEEEeecc
Confidence 001100 122334443311 111122222233345668999999999999999999987653 47999999997
Q ss_pred cCCCCCCCCCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccC
Q 039436 234 PVTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAEL 313 (422)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~l 313 (422)
+... . ....+.+|.+|||++++++||||||||+..++.+++.+++.+|+.++.+|+|+++...... .....+
T Consensus 229 ~~~~-~--~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~-----~~~~~l 300 (442)
T PLN02208 229 PEPD-T--SKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSS-----TVQEGL 300 (442)
T ss_pred cCcC-C--CCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccc-----chhhhC
Confidence 5321 0 1224678999999999899999999999999999999999999999999999998642100 012468
Q ss_pred ChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEee
Q 039436 314 PKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMAD 393 (422)
Q Consensus 314 p~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~ 393 (422)
|++|.++++++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+..
T Consensus 301 p~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~ 380 (442)
T PLN02208 301 PEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSR 380 (442)
T ss_pred CHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998877899999962
Q ss_pred ccccccccCHHHHHHHHHHHhcCC
Q 039436 394 WARRDEIVTSNVIENAVKRLMASK 417 (422)
Q Consensus 394 ~~~~~~~~~~~~l~~av~~~l~~~ 417 (422)
++.+.+++++|+++|+++|+++
T Consensus 381 --~~~~~~~~~~l~~ai~~~m~~~ 402 (442)
T PLN02208 381 --EKTGWFSKESLSNAIKSVMDKD 402 (442)
T ss_pred --ccCCcCcHHHHHHHHHHHhcCC
Confidence 1112499999999999999865
No 9
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=6.3e-66 Score=506.24 Aligned_cols=385 Identities=27% Similarity=0.427 Sum_probs=284.9
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACK 80 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~ 80 (422)
++|||++||++||++||++|+++|+.|||++|+.+... .. ....+|+|..+| ++ .+++....
T Consensus 12 lvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~--~~----------~~~~~i~~~~ip--~g--lp~~~~~~-- 73 (451)
T PLN02410 12 LVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFS--PS----------DDFTDFQFVTIP--ES--LPESDFKN-- 73 (451)
T ss_pred EECCCccccHHHHHHHHHHHHcCCCEEEEEeCcccccc--cc----------cCCCCeEEEeCC--CC--CCcccccc--
Confidence 58999999999999999999999999999999975421 11 001368888875 32 22211111
Q ss_pred CCCcchhhHHH-hhhchHHHHHHHHHhcc--CCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHH----
Q 039436 81 FPSHIIPCCEA-SKHLRHPLATLLNTLSA--TARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWE---- 153 (422)
Q Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~l~~l~~--~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~---- 153 (422)
. ....++.. ...+.+.++++++++.. ..+++|||+|.+++|+.++|+++ |||+++|++++++.+..+...
T Consensus 74 -~-~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~l-gIP~v~F~t~~a~~~~~~~~~~~~~ 150 (451)
T PLN02410 74 -L-GPIEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEF-KLPNVIFSTTSATAFVCRSVFDKLY 150 (451)
T ss_pred -c-CHHHHHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHc-CCCEEEEEccCHHHHHHHHHHHHHH
Confidence 1 12234443 45677888888887642 22458999999999999999999 999999999998766544421
Q ss_pred hcCC--CC-C--------CCC-CCCCCCCCCCCCCCCchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhhhc
Q 039436 154 RMGN--PN-L--------NEA-SGLIPKDVPSLEGCFTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKATVA 221 (422)
Q Consensus 154 ~~~~--~~-~--------~~~-~~l~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~~~ 221 (422)
..+. +. . .++ ..++..++|.+.......+...+.... ...+++++++|||.+||+.+++++++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~-~~~~~~~vlvNTf~eLE~~~~~~l~~~~-- 227 (451)
T PLN02410 151 ANNVLAPLKEPKGQQNELVPEFHPLRCKDFPVSHWASLESIMELYRNTV-DKRTASSVIINTASCLESSSLSRLQQQL-- 227 (451)
T ss_pred hccCCCCccccccCccccCCCCCCCChHHCcchhcCCcHHHHHHHHHHh-hcccCCEEEEeChHHhhHHHHHHHHhcc--
Confidence 1110 10 0 011 012223333321111112233333222 3467899999999999999999997653
Q ss_pred cCCcccccCCCCcCCCCCCCCCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCC
Q 039436 222 ETFNHWALGPFNPVTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRG 301 (422)
Q Consensus 222 ~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~ 301 (422)
++++|+|||++............+.+|.+|||+++++|||||||||+...+.+++++++.||+.++++|||+++.....
T Consensus 228 -~~~v~~vGpl~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~ 306 (451)
T PLN02410 228 -QIPVYPIGPLHLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVR 306 (451)
T ss_pred -CCCEEEecccccccCCCccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCccc
Confidence 3689999999753211111122345799999999999999999999999999999999999999999999999853210
Q ss_pred CccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHH
Q 039436 302 DVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLI 381 (422)
Q Consensus 302 ~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~ 381 (422)
. ++....+|++|.+|++++++++ +|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+++
T Consensus 307 ~----~~~~~~lp~~f~er~~~~g~v~-~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~ 381 (451)
T PLN02410 307 G----SEWIESLPKEFSKIISGRGYIV-KWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYL 381 (451)
T ss_pred c----cchhhcCChhHHHhccCCeEEE-ccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHH
Confidence 0 0112348999999998877555 8999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCeEEEEeeccccccccCHHHHHHHHHHHhcCCcccC
Q 039436 382 THLLKLGLVMADWARRDEIVTSNVIENAVKRLMASKEGDE 421 (422)
Q Consensus 382 ~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~ 421 (422)
++.||+|+.+. +.+++++|+++|+++|.++++++
T Consensus 382 ~~~~~~G~~~~------~~~~~~~v~~av~~lm~~~~~~~ 415 (451)
T PLN02410 382 ECVWKIGIQVE------GDLDRGAVERAVKRLMVEEEGEE 415 (451)
T ss_pred HHHhCeeEEeC------CcccHHHHHHHHHHHHcCCcHHH
Confidence 98789999995 36899999999999999876654
No 10
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=3.1e-65 Score=499.03 Aligned_cols=404 Identities=24% Similarity=0.379 Sum_probs=290.3
Q ss_pred CcccCCccCHHHHHHHHHHHHhC-CCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSY-NIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAAC 79 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~-Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~ 79 (422)
++|||++||++||++||++|+++ |..|||++++.....+.... ....... .++|+|+.+|+++....++.
T Consensus 8 l~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~---~~~~~~~-~~~i~~~~lp~~~~~~l~~~----- 78 (470)
T PLN03015 8 LVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETE---AIHAAAA-RTTCQITEIPSVDVDNLVEP----- 78 (470)
T ss_pred EECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhcccc---ccccccC-CCceEEEECCCCccccCCCC-----
Confidence 58999999999999999999987 99999999886543331100 0000000 12699999975442211110
Q ss_pred CCCCcchhhHHHhhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCc-eEEeechHHHHHHHHHHHh--cC
Q 039436 80 KFPSHIIPCCEASKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAE-SYTFHSVSAFTLYLYIWER--MG 156 (422)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP-~v~~~~~~~~~~~~~~~~~--~~ 156 (422)
+ ......++.+...+.+.++++++++.. +++|||+|.+++|+.++|+++ ||| +++|++++++....+++.. ..
T Consensus 79 ~-~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~~ciV~D~f~~w~~~vA~~l-gIP~~~~f~~~~a~~~~~~~~l~~~~~ 154 (470)
T PLN03015 79 D-ATIFTKMVVKMRAMKPAVRDAVKSMKR--KPTVMIVDFFGTALMSIADDV-GVTAKYVYIPSHAWFLAVMVYLPVLDT 154 (470)
T ss_pred C-ccHHHHHHHHHHhchHHHHHHHHhcCC--CCeEEEEcCCcHHHHHHHHHc-CCCEEEEEcCHHHHHHHHHHhhhhhhc
Confidence 1 111123444566888999999988742 568999999999999999999 999 5888888876554443221 10
Q ss_pred C--C--CC------CCCC-CCCCCCCCCCCCCCchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhhhc---c
Q 039436 157 N--P--NL------NEAS-GLIPKDVPSLEGCFTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKATVA---E 222 (422)
Q Consensus 157 ~--~--~~------~~~~-~l~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~~~---~ 222 (422)
. . .. .++. .++..++|.............+.+......+++++++|||.+||+.+++++++.+.. .
T Consensus 155 ~~~~~~~~~~~~~~vPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~ 234 (470)
T PLN03015 155 VVEGEYVDIKEPLKIPGCKPVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVM 234 (470)
T ss_pred ccccccCCCCCeeeCCCCCCCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhccccccc
Confidence 0 0 00 1111 133333332111111111222334445678899999999999999999998764200 0
Q ss_pred CCcccccCCCCcCCCCCCCCCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCC
Q 039436 223 TFNHWALGPFNPVTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGD 302 (422)
Q Consensus 223 ~~~~~~VGPl~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~ 302 (422)
.+++|+|||++... .....+.+|.+|||+++++|||||||||+..++.+++++++.||+.++++|||+++......
T Consensus 235 ~~~v~~VGPl~~~~----~~~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~ 310 (470)
T PLN03015 235 KVPVYPIGPIVRTN----VHVEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYL 310 (470)
T ss_pred CCceEEecCCCCCc----ccccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCcccc
Confidence 25799999997421 11122357999999999999999999999999999999999999999999999998532100
Q ss_pred --ccc-cchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHH
Q 039436 303 --VFN-GEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTL 379 (422)
Q Consensus 303 --~~~-~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~ 379 (422)
... .++....+|++|.+|++++++++.+|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||+
T Consensus 311 ~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~ 390 (470)
T PLN03015 311 GASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNAT 390 (470)
T ss_pred ccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHH
Confidence 000 00012368999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhc--CCcccCC
Q 039436 380 LITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMA--SKEGDEI 422 (422)
Q Consensus 380 ~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~--~~~~~~~ 422 (422)
+++++||+|+++.. +...+.+++++|+++|+++|+ +++|++|
T Consensus 391 ~~~~~~gvg~~~~~-~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~ 434 (470)
T PLN03015 391 LLTEEIGVAVRTSE-LPSEKVIGREEVASLVRKIVAEEDEEGQKI 434 (470)
T ss_pred HHHHHhCeeEEecc-cccCCccCHHHHHHHHHHHHccCcccHHHH
Confidence 99777999999951 011236999999999999996 3667653
No 11
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=3.8e-65 Score=503.18 Aligned_cols=405 Identities=26% Similarity=0.488 Sum_probs=290.4
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCC-CCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYP-CPPPNPNAAC 79 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~-~~~~~~~~~~ 79 (422)
++|||++||++||++||+.|+++|+.|||++|+.+...+.+.... .. ..+..|+|+.+++|... +.+++.....
T Consensus 13 ~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~----~~-~~~~~i~~~~lp~p~~~dglp~~~~~~~ 87 (491)
T PLN02534 13 LIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDR----AR-ESGLPIRLVQIPFPCKEVGLPIGCENLD 87 (491)
T ss_pred EECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhh----cc-ccCCCeEEEEcCCCCccCCCCCCccccc
Confidence 589999999999999999999999999999999877666543110 00 00114899999876422 2333222222
Q ss_pred CCCC-cchh-hHHHhhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHH--HHhc
Q 039436 80 KFPS-HIIP-CCEASKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYI--WERM 155 (422)
Q Consensus 80 ~~~~-~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~--~~~~ 155 (422)
+... .+.. +..+...+.+.+++++++. ..+++|||+|.+++|+.++|+++ |||++.|++++++....++ +...
T Consensus 88 ~~~~~~~~~~~~~~~~~l~~~l~~lL~~~--~~pp~cIV~D~f~~Wa~dVA~~l-gIP~v~F~t~~a~~~~~~~~~~~~~ 164 (491)
T PLN02534 88 TLPSRDLLRKFYDAVDKLQQPLERFLEQA--KPPPSCIISDKCLSWTSKTAQRF-NIPRIVFHGMCCFSLLSSHNIRLHN 164 (491)
T ss_pred cCCcHHHHHHHHHHHHHhHHHHHHHHHhc--CCCCcEEEECCccHHHHHHHHHh-CCCeEEEecchHHHHHHHHHHHHhc
Confidence 2221 2222 2233556778888888754 22568999999999999999999 9999999999987665543 2221
Q ss_pred CCC-CC-------CCCC----CCCCCCCCCCCCCCchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhhhccC
Q 039436 156 GNP-NL-------NEAS----GLIPKDVPSLEGCFTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKATVAET 223 (422)
Q Consensus 156 ~~~-~~-------~~~~----~l~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~~~~~ 223 (422)
... .. .+.. .++..++|.+... ...+..++........+++++++|||.+||+.+++++++.+ +
T Consensus 165 ~~~~~~~~~~~~~iPg~p~~~~l~~~dlp~~~~~-~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~---~ 240 (491)
T PLN02534 165 AHLSVSSDSEPFVVPGMPQSIEITRAQLPGAFVS-LPDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAI---K 240 (491)
T ss_pred ccccCCCCCceeecCCCCccccccHHHCChhhcC-cccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhc---C
Confidence 110 00 0110 1222233321100 01111222222222345789999999999999999987654 3
Q ss_pred CcccccCCCCcCCCCC-----CCC--CCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEe
Q 039436 224 FNHWALGPFNPVTLPN-----KGG--SNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLR 296 (422)
Q Consensus 224 ~~~~~VGPl~~~~~~~-----~~~--~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~ 296 (422)
+++|+|||++...... ... ...+++|.+|||+++++|||||||||+.....+++.+++.||+.++++|||+++
T Consensus 241 ~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r 320 (491)
T PLN02534 241 KKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIK 320 (491)
T ss_pred CcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEe
Confidence 6899999997422100 000 112356999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhh
Q 039436 297 DADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPR 376 (422)
Q Consensus 297 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~ 376 (422)
...... +.....+|++|.++++++|+++.+|+||..||+|+++++|||||||||++||+++|||||+||+++||+.
T Consensus 321 ~~~~~~----~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~ 396 (491)
T PLN02534 321 TGEKHS----ELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFL 396 (491)
T ss_pred cCcccc----chhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHH
Confidence 532110 0011246899999998999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCeEEEEee-----ccccc--c-ccCHHHHHHHHHHHhc--CCcccC
Q 039436 377 NTLLITHLLKLGLVMAD-----WARRD--E-IVTSNVIENAVKRLMA--SKEGDE 421 (422)
Q Consensus 377 na~~~~~~~g~g~~~~~-----~~~~~--~-~~~~~~l~~av~~~l~--~~~~~~ 421 (422)
||++++++||+|+++.. ++.+. + .+++++|+++|+++|. +++|++
T Consensus 397 na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~ 451 (491)
T PLN02534 397 NEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGER 451 (491)
T ss_pred HHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHH
Confidence 99999988999998841 11111 1 4899999999999997 466654
No 12
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=4.1e-65 Score=502.26 Aligned_cols=401 Identities=24% Similarity=0.406 Sum_probs=291.3
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhh--ccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVR--VHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAA 78 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~--~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~ 78 (422)
++|||++||++||++||++|+++|+.|||++|+.+...+.+. +.. .. ........++|..+ |++ .+++....
T Consensus 12 ~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~-~~-~~~~~~~~i~~~~~--pdg--lp~~~~~~ 85 (480)
T PLN02555 12 LVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQD-GV-LKPVGDGFIRFEFF--EDG--WAEDDPRR 85 (480)
T ss_pred EECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccc-cc-cccCCCCeEEEeeC--CCC--CCCCcccc
Confidence 589999999999999999999999999999999866655431 000 00 00000113555544 442 12211111
Q ss_pred CCCCCcchhhHHH-hhhchHHHHHHHHHhccCCCe-eEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhcC
Q 039436 79 CKFPSHIIPCCEA-SKHLRHPLATLLNTLSATARR-VVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERMG 156 (422)
Q Consensus 79 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~~~-d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~~ 156 (422)
.+...++.. ...+.+.++++++++....+| +|||+|.++.|+.++|+++ |||+++|++++++..+.+++...+
T Consensus 86 ----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~-gIP~~~F~t~~a~~~~~~~~~~~~ 160 (480)
T PLN02555 86 ----QDLDLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEEL-GIPSAVLWVQSCACFSAYYHYYHG 160 (480)
T ss_pred ----cCHHHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHc-CCCeEEeecccHHHHHHHHHHhhc
Confidence 122234443 446788899999876433345 7999999999999999999 999999999998776665543221
Q ss_pred C-C-CC---------CCC-CCCCCCCCCCCCCC--CchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhhhcc
Q 039436 157 N-P-NL---------NEA-SGLIPKDVPSLEGC--FTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKATVAE 222 (422)
Q Consensus 157 ~-~-~~---------~~~-~~l~~~~lp~~~~~--~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~~~~ 222 (422)
. + .. .++ +.++..++|.+... ....+.+.+.+......+++++++|||.+||+.+++.+++..
T Consensus 161 ~~~~~~~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~--- 237 (480)
T PLN02555 161 LVPFPTETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLC--- 237 (480)
T ss_pred CCCcccccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCC---
Confidence 1 1 00 111 11333445543211 122334445555666778999999999999999999887542
Q ss_pred CCcccccCCCCcCCCCC-CC--C--CCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEec
Q 039436 223 TFNHWALGPFNPVTLPN-KG--G--SNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRD 297 (422)
Q Consensus 223 ~~~~~~VGPl~~~~~~~-~~--~--~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~ 297 (422)
++|.|||++...... .. . +..+++|.+|||++++++||||||||+..++.+++.+++.+|+.++++|||+++.
T Consensus 238 --~v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~ 315 (480)
T PLN02555 238 --PIKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRP 315 (480)
T ss_pred --CEEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEec
Confidence 499999997532111 10 1 2345679999999988999999999999999999999999999999999999985
Q ss_pred CCCCCccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhH
Q 039436 298 ADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRN 377 (422)
Q Consensus 298 ~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~n 377 (422)
..... ......+|+++.+++++++ ++.+|+||..||.|+++++|||||||||++||+++|||||+||+++||+.|
T Consensus 316 ~~~~~----~~~~~~lp~~~~~~~~~~g-~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~N 390 (480)
T PLN02555 316 PHKDS----GVEPHVLPEEFLEKAGDKG-KIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTD 390 (480)
T ss_pred Ccccc----cchhhcCChhhhhhcCCce-EEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHH
Confidence 32100 0012358889988887655 556999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcCCcccCC
Q 039436 378 TLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMASKEGDEI 422 (422)
Q Consensus 378 a~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~ 422 (422)
|++++++||+|+++.......+.+++++|+++|+++|++++|++|
T Consensus 391 a~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~ 435 (480)
T PLN02555 391 AVYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAEL 435 (480)
T ss_pred HHHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHH
Confidence 999999889999995211113468999999999999998877653
No 13
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=1e-64 Score=502.57 Aligned_cols=399 Identities=23% Similarity=0.410 Sum_probs=290.3
Q ss_pred CcccCCccCHHHHHHHHHHHHhCC----CcEEEEeCCCCc----hhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYN----IPVHYVGSAVHN----RQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPP 72 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~G----h~Vt~~t~~~~~----~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~ 72 (422)
|+|||++||++||++||++|+++| +.|||++++.+. ..+++.+.. .. ....+|+|+.+| +.. .+
T Consensus 8 lvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~----~~-~~~~~i~~~~lp--~~~-~p 79 (480)
T PLN00164 8 LLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRR----EA-ASGLDIRFHHLP--AVE-PP 79 (480)
T ss_pred EeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhh----cc-cCCCCEEEEECC--CCC-CC
Confidence 589999999999999999999997 799999998642 233332110 00 111258998886 322 11
Q ss_pred CCCCCCCCCCCcchhhHH-HhhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHH
Q 039436 73 PNPNAACKFPSHIIPCCE-ASKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYI 151 (422)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~ 151 (422)
++. .....++. ....+.+.++++++++. .+++|||+|.+++|+.++|+++ |||++.|++++++....+.
T Consensus 80 ~~~-------e~~~~~~~~~~~~~~~~l~~~L~~l~--~pv~cIV~D~f~~Wa~dVA~el-gIP~v~F~t~sA~~~~~~~ 149 (480)
T PLN00164 80 TDA-------AGVEEFISRYIQLHAPHVRAAIAGLS--CPVAALVVDFFCTPLLDVAREL-AVPAYVYFTSTAAMLALML 149 (480)
T ss_pred Ccc-------ccHHHHHHHHHHhhhHHHHHHHHhcC--CCceEEEECCcchhHHHHHHHh-CCCEEEEECccHHHHHHHh
Confidence 111 11123333 35677888888887762 1347999999999999999999 9999999999987666554
Q ss_pred HHhc--CC-C---C------CCCC-CCCCCCCCCCCCCCCchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHh
Q 039436 152 WERM--GN-P---N------LNEA-SGLIPKDVPSLEGCFTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKA 218 (422)
Q Consensus 152 ~~~~--~~-~---~------~~~~-~~l~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~ 218 (422)
+... .. . . ..++ +.++..++|.+...........+....+...+++++++|||.+||+.+++++++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~iPGlp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~ 229 (480)
T PLN00164 150 RLPALDEEVAVEFEEMEGAVDVPGLPPVPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADG 229 (480)
T ss_pred hhhhhcccccCcccccCcceecCCCCCCChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhc
Confidence 3311 11 0 0 0111 1134445554321111122333444455677899999999999999999998764
Q ss_pred hhcc---CCcccccCCCCcCCCCCCCCCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEE
Q 039436 219 TVAE---TFNHWALGPFNPVTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVL 295 (422)
Q Consensus 219 ~~~~---~~~~~~VGPl~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~ 295 (422)
.... .+++|.|||+++.... ......+++|.+|||+++++|||||||||+..++.+++++++.||+.++++|||++
T Consensus 230 ~~~~~~~~~~v~~vGPl~~~~~~-~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~ 308 (480)
T PLN00164 230 RCTPGRPAPTVYPIGPVISLAFT-PPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVL 308 (480)
T ss_pred cccccCCCCceEEeCCCcccccc-CCCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 2101 1589999999743211 11123457899999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCcc-c-cchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccc
Q 039436 296 RDADRGDVF-N-GEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSD 373 (422)
Q Consensus 296 ~~~~~~~~~-~-~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~D 373 (422)
+........ . .......+|++|.++++++++++.+|+||..||+|+++++|||||||||++||+++|||||+||+++|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~D 388 (480)
T PLN00164 309 RGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAE 388 (480)
T ss_pred cCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCcccc
Confidence 864311000 0 00012348999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcCCc
Q 039436 374 QPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 374 q~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~ 418 (422)
|+.||+++++.+|+|+.+...+++.+.+++++|+++|+++|.+++
T Consensus 389 Q~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~ 433 (480)
T PLN00164 389 QHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGE 433 (480)
T ss_pred chhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCc
Confidence 999999887668999999532111235799999999999998754
No 14
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=1.8e-64 Score=497.33 Aligned_cols=383 Identities=24% Similarity=0.360 Sum_probs=288.5
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACK 80 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~ 80 (422)
++|||++||++||++||++|+++|++|||+|++.+.+.+.+.+. ..++|+|+.+| ++. + ..
T Consensus 11 lvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~---------~~~~i~~v~lp--~g~--~-~~----- 71 (448)
T PLN02562 11 LVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLD---------PKLGITFMSIS--DGQ--D-DD----- 71 (448)
T ss_pred EEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccC---------CCCCEEEEECC--CCC--C-CC-----
Confidence 58999999999999999999999999999999988766654311 11368998875 321 1 11
Q ss_pred CCCcchhhHHHhh-hchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHh----c
Q 039436 81 FPSHIIPCCEASK-HLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWER----M 155 (422)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~----~ 155 (422)
....+..++.+.. .+.+.++++++++.+..+.+|||+|.++.|+.++|+++ |||+++|++++++..+.+.+.. .
T Consensus 72 ~~~~~~~l~~a~~~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~-giP~~~f~~~~a~~~~~~~~~~~~~~~ 150 (448)
T PLN02562 72 PPRDFFSIENSMENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRC-GVPVAGFWPVMLAAYRLIQAIPELVRT 150 (448)
T ss_pred ccccHHHHHHHHHHhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHh-CCCEEEEechhHHHHHHHHHHHHHhhc
Confidence 1112333444543 68899999998875433347999999999999999999 9999999999886555443221 1
Q ss_pred CC-CCC-----------CCCC-CCCCCCCCCCCCCC--chhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhhh
Q 039436 156 GN-PNL-----------NEAS-GLIPKDVPSLEGCF--TSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKATV 220 (422)
Q Consensus 156 ~~-~~~-----------~~~~-~l~~~~lp~~~~~~--~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~~ 220 (422)
+. ... .++. .++..++|.+.... .......+.+..+...+++++++|||.+||+.+++.++...+
T Consensus 151 ~~~~~~~~~~~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~ 230 (448)
T PLN02562 151 GLISETGCPRQLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYN 230 (448)
T ss_pred cccccccccccccccccCCCCCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhc
Confidence 10 000 1111 12333444432111 222345555666667789999999999999988887654321
Q ss_pred c-cCCcccccCCCCcCCCCCC-CC--CCCccccHHHhhcccCCcceEEecCCcc-cCcHHHHHHHHHHHhhCCCeeEEEE
Q 039436 221 A-ETFNHWALGPFNPVTLPNK-GG--SNGRHFCLEWLDKQEKNSVLYVSFGTTT-AMSDEQIKELAVGLKQSNQKFIWVL 295 (422)
Q Consensus 221 ~-~~~~~~~VGPl~~~~~~~~-~~--~~~~~~~~~wl~~~~~~~vv~vs~Gs~~-~~~~~~~~~~~~~l~~~~~~~v~~~ 295 (422)
. ..+++++|||++....... .. ...+.+|.+|||+++++|||||||||+. .++.+++++++.+|++++++|||++
T Consensus 231 ~~~~~~v~~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~ 310 (448)
T PLN02562 231 NGQNPQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVL 310 (448)
T ss_pred cccCCCEEEecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 1 1378999999975331110 11 1334678999999988999999999986 6799999999999999999999999
Q ss_pred ecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchh
Q 039436 296 RDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQP 375 (422)
Q Consensus 296 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~ 375 (422)
+... .+.+|++|.++..++ +++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+
T Consensus 311 ~~~~----------~~~l~~~~~~~~~~~-~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~ 379 (448)
T PLN02562 311 NPVW----------REGLPPGYVERVSKQ-GKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQF 379 (448)
T ss_pred cCCc----------hhhCCHHHHHHhccC-EEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchH
Confidence 8642 224888998888764 46669999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcCCcccC
Q 039436 376 RNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMASKEGDE 421 (422)
Q Consensus 376 ~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~ 421 (422)
.||+++++.+|+|+.+. .+++++|+++|+++|+|+++++
T Consensus 380 ~na~~~~~~~g~g~~~~-------~~~~~~l~~~v~~~l~~~~~r~ 418 (448)
T PLN02562 380 VNCAYIVDVWKIGVRIS-------GFGQKEVEEGLRKVMEDSGMGE 418 (448)
T ss_pred HHHHHHHHHhCceeEeC-------CCCHHHHHHHHHHHhCCHHHHH
Confidence 99999987689998885 4799999999999999887763
No 15
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=8e-64 Score=490.98 Aligned_cols=390 Identities=25% Similarity=0.413 Sum_probs=278.9
Q ss_pred CcccCCccCHHHHHHHHHHHHhCC--CcEEEEeCCCCc-hhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYN--IPVHYVGSAVHN-RQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNA 77 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~G--h~Vt~~t~~~~~-~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~ 77 (422)
|+|||++||++||++||++|+++| +.|||++++.+. ..+.+.+. ......++++|+.+| +.... +....
T Consensus 8 ~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~-----~~~~~~~~i~~~~lp--~~~~~-~~~~~ 79 (468)
T PLN02207 8 FIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVK-----SIASSQPFVRFIDVP--ELEEK-PTLGG 79 (468)
T ss_pred EeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhh-----hccCCCCCeEEEEeC--CCCCC-Ccccc
Confidence 589999999999999999999998 999999999754 33332211 010112469999986 22111 11011
Q ss_pred CCCCCCcchh-hHHHhhhc----hHHHHHHHHHhccCCCe-eEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHH
Q 039436 78 ACKFPSHIIP-CCEASKHL----RHPLATLLNTLSATARR-VVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYI 151 (422)
Q Consensus 78 ~~~~~~~~~~-~~~~~~~~----~~~~~~~l~~l~~~~~~-d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~ 151 (422)
..+... ++.....+ .+.+.+++++.....+| +|||+|.+++|+.++|+++ |||++.|++++++....+.
T Consensus 80 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~-gip~~~f~~~~a~~~~~~~ 154 (468)
T PLN02207 80 ----TQSVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDV-SLPFYVFLTTNSGFLAMMQ 154 (468)
T ss_pred ----ccCHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHh-CCCEEEEECccHHHHHHHH
Confidence 112222 22334445 34455555543322244 6999999999999999999 9999999999986655544
Q ss_pred HHhc-CC-C--C---------CCCC--CCCCCCCCCCCCCCCchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHH
Q 039436 152 WERM-GN-P--N---------LNEA--SGLIPKDVPSLEGCFTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLE 216 (422)
Q Consensus 152 ~~~~-~~-~--~---------~~~~--~~l~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~ 216 (422)
+... .. . . ..++ ..++..++|.+... ... ...+.+......+++++++|||.+||+++++.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~~-~~~-~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~ 232 (468)
T PLN02207 155 YLADRHSKDTSVFVRNSEEMLSIPGFVNPVPANVLPSALFV-EDG-YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFL 232 (468)
T ss_pred HhhhccccccccCcCCCCCeEECCCCCCCCChHHCcchhcC-Ccc-HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHH
Confidence 3211 00 0 0 0121 12344444433211 111 2333444556778999999999999999998885
Q ss_pred HhhhccCCcccccCCCCcCCCCCCC--CCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEE
Q 039436 217 KATVAETFNHWALGPFNPVTLPNKG--GSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWV 294 (422)
Q Consensus 217 ~~~~~~~~~~~~VGPl~~~~~~~~~--~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~ 294 (422)
.. ...+++|+|||++........ ....+++|.+|||+++++|||||||||+...+.+++++++.||+.++++|||+
T Consensus 233 ~~--~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~ 310 (468)
T PLN02207 233 DE--QNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWS 310 (468)
T ss_pred hc--cCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEE
Confidence 42 012789999999753211110 01123679999999998999999999999999999999999999999999999
Q ss_pred EecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccch
Q 039436 295 LRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQ 374 (422)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq 374 (422)
++..... ....+|++|.++++++++ +.+|+||..||+|+++++|||||||||++||+++|||||+||+++||
T Consensus 311 ~r~~~~~-------~~~~lp~~f~er~~~~g~-i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ 382 (468)
T PLN02207 311 LRTEEVT-------NDDLLPEGFLDRVSGRGM-ICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQ 382 (468)
T ss_pred EeCCCcc-------ccccCCHHHHhhcCCCeE-EEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccc
Confidence 9953210 123589999999988774 55999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhhcCeEEEEeec-c-ccccccCHHHHHHHHHHHhc
Q 039436 375 PRNTLLITHLLKLGLVMADW-A-RRDEIVTSNVIENAVKRLMA 415 (422)
Q Consensus 375 ~~na~~~~~~~g~g~~~~~~-~-~~~~~~~~~~l~~av~~~l~ 415 (422)
+.||+++++++|+|+++... . +..+.+++++|+++|+++|+
T Consensus 383 ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 383 QLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMN 425 (468)
T ss_pred hhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHh
Confidence 99999988879999988420 0 01235699999999999997
No 16
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=4.6e-63 Score=493.23 Aligned_cols=403 Identities=26% Similarity=0.483 Sum_probs=284.4
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCC--CeEEEEecCCCCC-CCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNN--NIHFHDFEIPPYP-CPPPNPNA 77 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~--gi~f~~~~~~~~~-~~~~~~~~ 77 (422)
++|||++||++||++||++|++||++|||++++.+.+.+++... .+.+..+ .+++..+++|..+ ..+++...
T Consensus 10 lvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a-----~~~~~~~~~~~~~~~~~~p~~~~glP~g~e~ 84 (482)
T PLN03007 10 FFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIE-----AFKNLNPGLEIDIQIFNFPCVELGLPEGCEN 84 (482)
T ss_pred EECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhh-----hhcccCCCCcceEEEeeCCCCcCCCCCCccc
Confidence 58999999999999999999999999999999998776665411 0000011 2455555555322 12222111
Q ss_pred CCC-----C--CCcchhhH-HHhhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHH
Q 039436 78 ACK-----F--PSHIIPCC-EASKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYL 149 (422)
Q Consensus 78 ~~~-----~--~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~ 149 (422)
... . ...+...+ .....+.+.+++++++ .++||||+|.++.|+.++|+++ |||+++|++++++....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~----~~~~~IV~D~~~~w~~~vA~~l-gIP~v~f~~~~a~~~~~ 159 (482)
T PLN03007 85 VDFITSNNNDDSGDLFLKFLFSTKYFKDQLEKLLET----TRPDCLVADMFFPWATEAAEKF-GVPRLVFHGTGYFSLCA 159 (482)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHHHHhc----CCCCEEEECCcchhHHHHHHHh-CCCeEEeecccHHHHHH
Confidence 110 0 00111111 2233444445544433 3688999999999999999999 99999999998876555
Q ss_pred HHHHhcCCCC-CCC--CCCCCCCCCCC-C-------CCC-CchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHH
Q 039436 150 YIWERMGNPN-LNE--ASGLIPKDVPS-L-------EGC-FTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEK 217 (422)
Q Consensus 150 ~~~~~~~~~~-~~~--~~~l~~~~lp~-~-------~~~-~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~ 217 (422)
++......+. ... ...+..+++|. + ... ....+...+........+++++++|||.+||+.+.+.++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~pg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~ 239 (482)
T PLN03007 160 SYCIRVHKPQKKVASSSEPFVIPDLPGDIVITEEQINDADEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKS 239 (482)
T ss_pred HHHHHhcccccccCCCCceeeCCCCCCccccCHHhcCCCCCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHh
Confidence 4422111100 000 00111222321 0 001 1122334444555567788999999999999998888876
Q ss_pred hhhccCCcccccCCCCcCCCCC------C-CCCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCe
Q 039436 218 ATVAETFNHWALGPFNPVTLPN------K-GGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQK 290 (422)
Q Consensus 218 ~~~~~~~~~~~VGPl~~~~~~~------~-~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~ 290 (422)
.. ..++++|||+....... . ..+..+++|.+|||+++++|||||||||+...+.+++.+++.+|+.++++
T Consensus 240 ~~---~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~ 316 (482)
T PLN03007 240 FV---AKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQN 316 (482)
T ss_pred cc---CCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCC
Confidence 53 25799999986432110 0 01112467999999998899999999999999999999999999999999
Q ss_pred eEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCc
Q 039436 291 FIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPM 370 (422)
Q Consensus 291 ~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~ 370 (422)
|||+++...... .....+|++|.++++++|+++.+|+||..||+|+++++|||||||||++||+++|||||+||+
T Consensus 317 flw~~~~~~~~~-----~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~ 391 (482)
T PLN03007 317 FIWVVRKNENQG-----EKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPV 391 (482)
T ss_pred EEEEEecCCccc-----chhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccc
Confidence 999999642110 012358999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHhhcCeEEEEeeccc---cccccCHHHHHHHHHHHhcCCcccC
Q 039436 371 HSDQPRNTLLITHLLKLGLVMADWAR---RDEIVTSNVIENAVKRLMASKEGDE 421 (422)
Q Consensus 371 ~~Dq~~na~~~~~~~g~g~~~~~~~~---~~~~~~~~~l~~av~~~l~~~~~~~ 421 (422)
++||+.||+++++.+++|+.+...+. +.+.+++++|+++|+++|.+++|++
T Consensus 392 ~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~ 445 (482)
T PLN03007 392 GAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEE 445 (482)
T ss_pred hhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHH
Confidence 99999999999877788877631100 1346899999999999999885543
No 17
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=4.8e-63 Score=484.55 Aligned_cols=392 Identities=25% Similarity=0.412 Sum_probs=284.0
Q ss_pred CcccCCccCHHHHHHHHHHHHh-CCCcEEEEeCCCC-chhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLS-YNIPVHYVGSAVH-NRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAA 78 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~-~Gh~Vt~~t~~~~-~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~ 78 (422)
++|||++||++||++||++|++ +|+.|||++|+.+ .+.+.+. . ...++++|+.++ ++ .+++....
T Consensus 8 ~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~--------~-~~~~~i~~~~i~--dg--lp~g~~~~ 74 (455)
T PLN02152 8 LVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPN--------H-NNVENLSFLTFS--DG--FDDGVISN 74 (455)
T ss_pred EecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhhhhhhcc--------C-CCCCCEEEEEcC--CC--CCCccccc
Confidence 5899999999999999999996 7999999999954 2222111 0 011368898874 32 22221111
Q ss_pred CCCCCcchhhH-HHhhhchHHHHHHHHHhccCCCe-eEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhcC
Q 039436 79 CKFPSHIIPCC-EASKHLRHPLATLLNTLSATARR-VVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERMG 156 (422)
Q Consensus 79 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~-d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~~ 156 (422)
. ......+ .....+.+.++++++++....+| +|||+|.+++|+.++|+++ |||++.|++++++....+++....
T Consensus 75 ~---~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~l-gIP~~~f~t~~a~~~~~~~~~~~~ 150 (455)
T PLN02152 75 T---DDVQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRF-HLPSVLLWIQPAFVFDIYYNYSTG 150 (455)
T ss_pred c---ccHHHHHHHHHHhccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHh-CCCEEEEECccHHHHHHHHHhhcc
Confidence 1 1222223 33567888999999886532234 7999999999999999999 999999999999776665543221
Q ss_pred CC--CCCCCC-CCCCCCCCCCCC--CCchhHHHHHHHHHhhhhc--CCeEEecChhhccHHHHHHHHHhhhccCCccccc
Q 039436 157 NP--NLNEAS-GLIPKDVPSLEG--CFTSEFLDSIASEYDHMKF--NSGNVYNTSRVIESAYMDLLEKATVAETFNHWAL 229 (422)
Q Consensus 157 ~~--~~~~~~-~l~~~~lp~~~~--~~~~~~~~~~~~~~~~~~~--~~~~lvnt~~~le~~~~~~~~~~~~~~~~~~~~V 229 (422)
.. ...++. .++..++|.+.. .....+.+.+.+..+.+.+ ++++++|||.+||+.++++++. .++|+|
T Consensus 151 ~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~------~~v~~V 224 (455)
T PLN02152 151 NNSVFEFPNLPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN------IEMVAV 224 (455)
T ss_pred CCCeeecCCCCCCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc------CCEEEE
Confidence 11 112221 244566666421 1122234444454554433 5799999999999999998853 379999
Q ss_pred CCCCcCCC--CCCCC-----CCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCC
Q 039436 230 GPFNPVTL--PNKGG-----SNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGD 302 (422)
Q Consensus 230 GPl~~~~~--~~~~~-----~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~ 302 (422)
||+++... ....+ +..+.+|.+|||++++++||||||||+..++.+++++++.||+.++++|||+++......
T Consensus 225 GPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~ 304 (455)
T PLN02152 225 GPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNRE 304 (455)
T ss_pred cccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccc
Confidence 99975321 11100 123457999999998899999999999999999999999999999999999998632100
Q ss_pred c-cccch-hcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHH
Q 039436 303 V-FNGEV-RRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLL 380 (422)
Q Consensus 303 ~-~~~~~-~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~ 380 (422)
. ...++ ....+|++|.++.+++++ +.+|+||..||+|+++++|||||||||++||+++|||||+||+++||+.||++
T Consensus 305 ~~~~~~~~~~~~~~~~f~e~~~~~g~-v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~ 383 (455)
T PLN02152 305 AKIEGEEETEIEKIAGFRHELEEVGM-IVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKL 383 (455)
T ss_pred cccccccccccccchhHHHhccCCeE-EEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHH
Confidence 0 00000 011357899999887664 55999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcCCc
Q 039436 381 ITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 381 ~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~ 418 (422)
+++.||+|+.+... +.+.+++|+|+++|+++|+++.
T Consensus 384 ~~~~~~~G~~~~~~--~~~~~~~e~l~~av~~vm~~~~ 419 (455)
T PLN02152 384 LEEIWKTGVRVREN--SEGLVERGEIRRCLEAVMEEKS 419 (455)
T ss_pred HHHHhCceEEeecC--cCCcCcHHHHHHHHHHHHhhhH
Confidence 99878999888521 1235799999999999998653
No 18
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=7.2e-63 Score=486.46 Aligned_cols=380 Identities=23% Similarity=0.373 Sum_probs=274.7
Q ss_pred CcccCCccCHHHHHHHHHH--HHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRL--VLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAA 78 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~--L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~ 78 (422)
|+|||++||++|||+||++ |++||++|||++|+.+.+.+++. + .....+++..++ ++ .+++. .
T Consensus 13 ~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~----~-----~~~~~~~~~~~~--~g--lp~~~-~- 77 (456)
T PLN02210 13 MVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTV----E-----KPRRPVDLVFFS--DG--LPKDD-P- 77 (456)
T ss_pred EeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhccc----c-----CCCCceEEEECC--CC--CCCCc-c-
Confidence 5899999999999999999 56999999999999887665332 0 001356665553 32 22211 0
Q ss_pred CCCCCcchhhHHH-hhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhc--
Q 039436 79 CKFPSHIIPCCEA-SKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERM-- 155 (422)
Q Consensus 79 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~-- 155 (422)
.....++.. .+.+.+.+++++++. +++|||+|.++.|+.++|+++ |||++.|++.++.....+.+...
T Consensus 78 ----~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~vI~D~~~~w~~~vA~~l-gIP~~~f~~~sa~~~~~~~~~~~~~ 148 (456)
T PLN02210 78 ----RAPETLLKSLNKVGAKNLSKIIEEK----RYSCIISSPFTPWVPAVAAAH-NIPCAILWIQACGAYSVYYRYYMKT 148 (456)
T ss_pred ----cCHHHHHHHHHHhhhHHHHHHHhcC----CCcEEEECCcchhHHHHHHHh-CCCEEEEecccHHHHHHHHhhhhcc
Confidence 112223333 345566666666553 588999999999999999999 99999999888765554432211
Q ss_pred CCCCCC---------CC-CCCCCCCCCCCCCCCchh-HHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhhhccCC
Q 039436 156 GNPNLN---------EA-SGLIPKDVPSLEGCFTSE-FLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKATVAETF 224 (422)
Q Consensus 156 ~~~~~~---------~~-~~l~~~~lp~~~~~~~~~-~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~~~~~~ 224 (422)
...... +. +.++..++|.+....... +...+.+..+...+++++++|||.+||+.+++++++. +
T Consensus 149 ~~~~~~~~~~~~~~~Pgl~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~-----~ 223 (456)
T PLN02210 149 NSFPDLEDLNQTVELPALPLLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADL-----K 223 (456)
T ss_pred CCCCcccccCCeeeCCCCCCCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhc-----C
Confidence 100000 10 012222333221111111 1222333334456789999999999999999988752 6
Q ss_pred cccccCCCCcCC---CCC-C--C-----CCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEE
Q 039436 225 NHWALGPFNPVT---LPN-K--G-----GSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIW 293 (422)
Q Consensus 225 ~~~~VGPl~~~~---~~~-~--~-----~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~ 293 (422)
++|+|||+++.. ... . . -+..+++|.+|||+++++|||||||||+...+.+++++++.||+.++++|||
T Consensus 224 ~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw 303 (456)
T PLN02210 224 PVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLW 303 (456)
T ss_pred CEEEEcccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEE
Confidence 899999997521 100 0 0 0234567999999999899999999999999999999999999999999999
Q ss_pred EEecCCCCCccccchhcccCChhhHhhcc-CCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCccc
Q 039436 294 VLRDADRGDVFNGEVRRAELPKAYEDSVK-DKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHS 372 (422)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~ 372 (422)
+++.... ...+++|.+++. ++++ +++|+||..||+|+++++|||||||||++||+++|||||+||+++
T Consensus 304 ~~~~~~~----------~~~~~~~~~~~~~~~g~-v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~ 372 (456)
T PLN02210 304 VIRPKEK----------AQNVQVLQEMVKEGQGV-VLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWT 372 (456)
T ss_pred EEeCCcc----------ccchhhHHhhccCCCeE-EEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEeccccc
Confidence 9986421 123456777764 5564 569999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcCCcccC
Q 039436 373 DQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMASKEGDE 421 (422)
Q Consensus 373 Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~ 421 (422)
||+.||+++++++|+|+.+...+ ..+.+++++|+++|+++|.+++|++
T Consensus 373 DQ~~na~~~~~~~g~G~~l~~~~-~~~~~~~~~l~~av~~~m~~~~g~~ 420 (456)
T PLN02210 373 DQPIDARLLVDVFGIGVRMRNDA-VDGELKVEEVERCIEAVTEGPAAAD 420 (456)
T ss_pred ccHHHHHHHHHHhCeEEEEeccc-cCCcCCHHHHHHHHHHHhcCchHHH
Confidence 99999999997689999996311 1236999999999999999887654
No 19
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.4e-62 Score=486.35 Aligned_cols=398 Identities=24% Similarity=0.420 Sum_probs=280.3
Q ss_pred CcccCCccCHHHHHHHHHHHHhCC--CcEEEEeCCCCchhh---hhhccCCCCCccCC-CCCCeEEEEecCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYN--IPVHYVGSAVHNRQA---QVRVHGWDPLDVSS-NNNNIHFHDFEIPPYPCPPPN 74 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~G--h~Vt~~t~~~~~~~~---~~~~~~~~~~~~~~-~~~gi~f~~~~~~~~~~~~~~ 74 (422)
++|||++||++||++|||+|+++| +.|||++|+.+...+ .+.+. ...+ ..++|+|+.+|.+. . +.
T Consensus 7 l~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~~lp~~~--~--~~ 77 (481)
T PLN02554 7 FIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIA-----SLSASSEDRLRYEVISAGD--Q--PT 77 (481)
T ss_pred EeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhh-----hcccCCCCCeEEEEcCCCC--C--Cc
Confidence 589999999999999999999998 889999998764422 11100 0100 12369999986332 1 11
Q ss_pred CCCCCCCCCcchhhHHHhhhchHHHHHHHHHhcc-----CCCe-eEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHH
Q 039436 75 PNAACKFPSHIIPCCEASKHLRHPLATLLNTLSA-----TARR-VVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLY 148 (422)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-----~~~~-d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~ 148 (422)
. +.. .+......+.+.+++.++++.. ..+| +|||+|.++.|+.++|+++ |||++.|++++++...
T Consensus 78 ~----~~~----~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~l-gIP~~~F~t~sa~~~~ 148 (481)
T PLN02554 78 T----EDP----TFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEF-GVPSYMFYTSNATFLG 148 (481)
T ss_pred c----cch----HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHh-CCCEEEEeCCcHHHHH
Confidence 0 111 1222233455555555555421 2244 6999999999999999999 9999999999987766
Q ss_pred HHHHHhcC-----CC-CC---------CCCC--CCCCCCCCCCCCCCchhHHHHHHHHHhhhhcCCeEEecChhhccHHH
Q 039436 149 LYIWERMG-----NP-NL---------NEAS--GLIPKDVPSLEGCFTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAY 211 (422)
Q Consensus 149 ~~~~~~~~-----~~-~~---------~~~~--~l~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~ 211 (422)
.+.+.... .. .. .++. .++..++|.+. ..+.+...+.+......+++++++|||.+||+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~v~iPgl~~pl~~~dlp~~~--~~~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~ 226 (481)
T PLN02554 149 LQLHVQMLYDEKKYDVSELEDSEVELDVPSLTRPYPVKCLPSVL--LSKEWLPLFLAQARRFREMKGILVNTVAELEPQA 226 (481)
T ss_pred HHHhhhhhccccccCccccCCCCceeECCCCCCCCCHHHCCCcc--cCHHHHHHHHHHHHhcccCCEEEEechHHHhHHH
Confidence 65443111 00 00 1110 22223343321 1123344555556677889999999999999999
Q ss_pred HHHHHHhhhccCCcccccCCCCcCCCCCCC-CCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCe
Q 039436 212 MDLLEKATVAETFNHWALGPFNPVTLPNKG-GSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQK 290 (422)
Q Consensus 212 ~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~-~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~ 290 (422)
...+...-. ..+++|+|||++........ ....+.+|.+|||++++++||||||||+...+.+++++++.||+.++++
T Consensus 227 ~~~l~~~~~-~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~ 305 (481)
T PLN02554 227 LKFFSGSSG-DLPPVYPVGPVLHLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHR 305 (481)
T ss_pred HHHHHhccc-CCCCEEEeCCCccccccccccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCC
Confidence 888865200 12689999999532211110 0123468999999998899999999999999999999999999999999
Q ss_pred eEEEEecCCCCCccc--cc--hhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEE
Q 039436 291 FIWVLRDADRGDVFN--GE--VRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIV 366 (422)
Q Consensus 291 ~v~~~~~~~~~~~~~--~~--~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v 366 (422)
|||+++......... ++ .....+|++|.+|++++++ +.+|+||.+||+|+++++|||||||||++||+++|||||
T Consensus 306 flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~-v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l 384 (481)
T PLN02554 306 FLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGK-VIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMA 384 (481)
T ss_pred eEEEEcCCcccccccccccccchhhhCChHHHHHhccCce-EEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEE
Confidence 999998632110000 00 0112369999999988764 459999999999999999999999999999999999999
Q ss_pred ccCcccchhhHHHHHHhhcCeEEEEeecc------ccccccCHHHHHHHHHHHhc-CCccc
Q 039436 367 AWPMHSDQPRNTLLITHLLKLGLVMADWA------RRDEIVTSNVIENAVKRLMA-SKEGD 420 (422)
Q Consensus 367 ~~P~~~Dq~~na~~~~~~~g~g~~~~~~~------~~~~~~~~~~l~~av~~~l~-~~~~~ 420 (422)
+||+++||+.||+++++.+|+|+.+..+. .+.+.+++++|+++|+++|+ |++++
T Consensus 385 ~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r 445 (481)
T PLN02554 385 AWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVR 445 (481)
T ss_pred ecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHHHH
Confidence 99999999999965444489999996210 01246899999999999997 66555
No 20
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.8e-62 Score=485.24 Aligned_cols=398 Identities=25% Similarity=0.391 Sum_probs=276.2
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCC---cEEEEeCCCCch-hhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNI---PVHYVGSAVHNR-QAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPN 76 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh---~Vt~~t~~~~~~-~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~ 76 (422)
++|||++||++||++|||+|+++|. .||++++..... ..+..+. ...++.++|+|+.+|++. . ++...
T Consensus 8 ~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~-----~~~~~~~~i~~~~lp~~~--~-p~~~~ 79 (475)
T PLN02167 8 FVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLK-----SLIASEPRIRLVTLPEVQ--D-PPPME 79 (475)
T ss_pred EeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHh-----hcccCCCCeEEEECCCCC--C-Ccccc
Confidence 5899999999999999999999994 466666553211 1111110 000112469999986433 1 11111
Q ss_pred CCCCCCCcchhhHHHhhhchHHHHHHHHHhccC----C--CeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHH
Q 039436 77 AACKFPSHIIPCCEASKHLRHPLATLLNTLSAT----A--RRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLY 150 (422)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~--~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~ 150 (422)
.... .....+......+.+.+++.++++..+ . +++|||+|.+++|+.++|+++ |||+++|++++++.+..+
T Consensus 80 ~~~~--~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~el-gIP~v~F~t~~A~~~~~~ 156 (475)
T PLN02167 80 LFVK--ASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEF-NLPSYIFLTCNAGFLGMM 156 (475)
T ss_pred cccc--chHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHh-CCCEEEEECccHHHHHHH
Confidence 0000 000122233456667777777765321 1 247999999999999999999 999999999998766555
Q ss_pred HHHh--cC-CCCC-----------CCC--CCCCCCCCCCCCCCCchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHH
Q 039436 151 IWER--MG-NPNL-----------NEA--SGLIPKDVPSLEGCFTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDL 214 (422)
Q Consensus 151 ~~~~--~~-~~~~-----------~~~--~~l~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~ 214 (422)
++.. .. .... .++ ..++..++|.... .....+.+.+..+...+++++++|||++||+.++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~iPgl~~~l~~~dlp~~~~--~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~ 234 (475)
T PLN02167 157 KYLPERHRKTASEFDLSSGEEELPIPGFVNSVPTKVLPPGLF--MKESYEAWVEIAERFPEAKGILVNSFTELEPNAFDY 234 (475)
T ss_pred HHHHHhccccccccccCCCCCeeECCCCCCCCChhhCchhhh--CcchHHHHHHHHHhhcccCEeeeccHHHHHHHHHHH
Confidence 4321 11 0100 011 0122222332110 011123344555667789999999999999999998
Q ss_pred HHHhhhccCCcccccCCCCcCCCCCC-C-CCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeE
Q 039436 215 LEKATVAETFNHWALGPFNPVTLPNK-G-GSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFI 292 (422)
Q Consensus 215 ~~~~~~~~~~~~~~VGPl~~~~~~~~-~-~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v 292 (422)
+++.. ...+++|+|||+++...... . ....+.+|.+|||+++++|||||||||+...+.+++.+++.||+.++++||
T Consensus 235 l~~~~-~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~fl 313 (475)
T PLN02167 235 FSRLP-ENYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFL 313 (475)
T ss_pred HHhhc-ccCCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEE
Confidence 86531 01168999999975321110 1 011236799999999989999999999999999999999999999999999
Q ss_pred EEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCccc
Q 039436 293 WVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHS 372 (422)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~ 372 (422)
|+++...... ......+|++|.+|++++++++ +|+||..||+|+++++|||||||||++||+++|||||+||+++
T Consensus 314 w~~~~~~~~~----~~~~~~lp~~~~er~~~rg~v~-~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~ 388 (475)
T PLN02167 314 WSIRTNPAEY----ASPYEPLPEGFMDRVMGRGLVC-GWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYA 388 (475)
T ss_pred EEEecCcccc----cchhhhCChHHHHHhccCeeee-ccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccc
Confidence 9998642110 0012358999999999888544 9999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhcCeEEEEeecc--ccccccCHHHHHHHHHHHhcCC
Q 039436 373 DQPRNTLLITHLLKLGLVMADWA--RRDEIVTSNVIENAVKRLMASK 417 (422)
Q Consensus 373 Dq~~na~~~~~~~g~g~~~~~~~--~~~~~~~~~~l~~av~~~l~~~ 417 (422)
||+.||+++.+.+|+|+.+.... .+.+.+++++|+++|+++|+++
T Consensus 389 DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~ 435 (475)
T PLN02167 389 EQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE 435 (475)
T ss_pred cchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCC
Confidence 99999987555599999986310 0013579999999999999865
No 21
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.1e-61 Score=477.77 Aligned_cols=381 Identities=26% Similarity=0.441 Sum_probs=280.4
Q ss_pred CcccCCccCHHHHHHHHHHHHhC--CCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSY--NIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAA 78 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~--Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~ 78 (422)
++|||++||++||++||++|+++ ||+|||++++.+.+.+++.. ..++++|+.++ +. .++....
T Consensus 15 lvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~----------~~~gi~fv~lp--~~--~p~~~~~- 79 (459)
T PLN02448 15 AMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDP----------KPDNIRFATIP--NV--IPSELVR- 79 (459)
T ss_pred EECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccC----------CCCCEEEEECC--CC--CCCcccc-
Confidence 58999999999999999999999 99999999999887776641 01479998885 32 1111111
Q ss_pred CCCCCcchhhHHH-hhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhc--
Q 039436 79 CKFPSHIIPCCEA-SKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERM-- 155 (422)
Q Consensus 79 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~-- 155 (422)
..+...++.. ...+.+.++++++++. .+++|||+|.++.|+.++|+++ |||++.|+++++..+..+.+...
T Consensus 80 ---~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~VI~D~~~~wa~~vA~~l-gIP~v~f~~~~a~~~~~~~~~~~~~ 153 (459)
T PLN02448 80 ---AADFPGFLEAVMTKMEAPFEQLLDRLE--PPVTAIVADTYLFWAVGVGNRR-NIPVASLWTMSATFFSVFYHFDLLP 153 (459)
T ss_pred ---ccCHHHHHHHHHHHhHHHHHHHHHhcC--CCcEEEEECCccHHHHHHHHHh-CCCeEEEEhHHHHHHHHHHHhhhhh
Confidence 1122233433 4467788888887764 2568999999999999999999 99999999999865554433211
Q ss_pred --CC-CCCC-----------CC-CCCCCCCCCCCCCCCchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhhh
Q 039436 156 --GN-PNLN-----------EA-SGLIPKDVPSLEGCFTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKATV 220 (422)
Q Consensus 156 --~~-~~~~-----------~~-~~l~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~~ 220 (422)
+. +... +. ..++..++|.+.........+.+.+......+++++++|||++||+.+++++++.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~- 232 (459)
T PLN02448 154 QNGHFPVELSESGEERVDYIPGLSSTRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKF- 232 (459)
T ss_pred hccCCCCccccccCCccccCCCCCCCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhc-
Confidence 00 1100 00 01122233332111111223444555556677899999999999999999987754
Q ss_pred ccCCcccccCCCCcCCCC--CCCC--C-CCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEE
Q 039436 221 AETFNHWALGPFNPVTLP--NKGG--S-NGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVL 295 (422)
Q Consensus 221 ~~~~~~~~VGPl~~~~~~--~~~~--~-~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~ 295 (422)
++++++|||+.+.... .... . ..+.+|.+||+++++++||||||||+...+.+++++++.+|+.++++|||++
T Consensus 233 --~~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~ 310 (459)
T PLN02448 233 --PFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVA 310 (459)
T ss_pred --CCceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 3589999999753210 0000 1 1234799999999889999999999988899999999999999999999987
Q ss_pred ecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchh
Q 039436 296 RDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQP 375 (422)
Q Consensus 296 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~ 375 (422)
+... .++.++.++ +.++.+|+||..||+|+++++|||||||||++||+++|||||+||+++||+
T Consensus 311 ~~~~---------------~~~~~~~~~-~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~ 374 (459)
T PLN02448 311 RGEA---------------SRLKEICGD-MGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQP 374 (459)
T ss_pred cCch---------------hhHhHhccC-CEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccch
Confidence 6431 234444433 556679999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcCC--cccC
Q 039436 376 RNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMASK--EGDE 421 (422)
Q Consensus 376 ~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~--~~~~ 421 (422)
.||+++++.||+|+.+..+..+.+.+++++|+++|+++|+++ +|++
T Consensus 375 ~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~ 422 (459)
T PLN02448 375 LNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKE 422 (459)
T ss_pred hhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHH
Confidence 999999987899999863211123589999999999999863 4543
No 22
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=6.7e-41 Score=328.95 Aligned_cols=347 Identities=20% Similarity=0.228 Sum_probs=229.2
Q ss_pred cccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCCC
Q 039436 2 VPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACKF 81 (422)
Q Consensus 2 vp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~~ 81 (422)
+.+|+.|||+|++.||++|+++||+|+|++++.+.+.+++. |+.|.+++. +.. ..........
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~--------------G~~~~~~~~-~~~-~~~~~~~~~~- 63 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEAA--------------GAEFVLYGS-ALP-PPDNPPENTE- 63 (392)
T ss_pred CCCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHHHHc--------------CCEEEecCC-cCc-cccccccccC-
Confidence 46899999999999999999999999999999999999887 888888752 111 1000000000
Q ss_pred CCcchhhHHH-hhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhcCCCCC
Q 039436 82 PSHIIPCCEA-SKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERMGNPNL 160 (422)
Q Consensus 82 ~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~~~~~~ 160 (422)
.....+.+. ...+...+.++. ++.+..+||+||+|.+++++..+|+++ |||+|.+++.+..+.. .+.
T Consensus 64 -~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~pDlVi~d~~~~~~~~~A~~~-giP~v~~~~~~~~~~~--------~~~- 131 (392)
T TIGR01426 64 -EEPIDIIEKLLDEAEDVLPQLE-EAYKGDRPDLIVYDIASWTGRLLARKW-DVPVISSFPTFAANEE--------FEE- 131 (392)
T ss_pred -cchHHHHHHHHHHHHHHHHHHH-HHhcCCCCCEEEECCccHHHHHHHHHh-CCCEEEEehhhccccc--------ccc-
Confidence 122222222 222223333333 333445899999999989999999999 9999988654321100 000
Q ss_pred CCCCCCCCCCC---CCCCCCCchhHHHHHHHHHhhh------------hcCCeEEecChhhccHHHHHHHHHhhhccCCc
Q 039436 161 NEASGLIPKDV---PSLEGCFTSEFLDSIASEYDHM------------KFNSGNVYNTSRVIESAYMDLLEKATVAETFN 225 (422)
Q Consensus 161 ~~~~~l~~~~l---p~~~~~~~~~~~~~~~~~~~~~------------~~~~~~lvnt~~~le~~~~~~~~~~~~~~~~~ 225 (422)
....+....+ +..... ...+.+.+.+..... ...+..+..+...+++. +..+ +++
T Consensus 132 -~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~~---~~~ 201 (392)
T TIGR01426 132 -MVSPAGEGSAEEGAIAERG-LAEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPA-----GETF---DDS 201 (392)
T ss_pred -cccccchhhhhhhccccch-hHHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCC-----cccc---CCC
Confidence 0000000000 000000 011111111111100 01112333333333331 2222 478
Q ss_pred ccccCCCCcCCCCCCCCCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccc
Q 039436 226 HWALGPFNPVTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFN 305 (422)
Q Consensus 226 ~~~VGPl~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~ 305 (422)
++++||+..... +...|++..+.+++|||||||+.....+.+.++++++++.+.++||..+......
T Consensus 202 ~~~~Gp~~~~~~----------~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~~--- 268 (392)
T TIGR01426 202 FTFVGPCIGDRK----------EDGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDPA--- 268 (392)
T ss_pred eEEECCCCCCcc----------ccCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCChh---
Confidence 999999864211 1223776666788999999998776777888899999999999999887543100
Q ss_pred cchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhc
Q 039436 306 GEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLL 385 (422)
Q Consensus 306 ~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~ 385 (422)
....+ ..|+.+.+|+||..+|++ +++||||||+||++||+++|+|+|++|...||+.||+++++ +
T Consensus 269 ---~~~~~---------~~~v~~~~~~p~~~ll~~--~~~~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~-~ 333 (392)
T TIGR01426 269 ---DLGEL---------PPNVEVRQWVPQLEILKK--ADAFITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAE-L 333 (392)
T ss_pred ---HhccC---------CCCeEEeCCCCHHHHHhh--CCEEEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHH-C
Confidence 01112 238889999999999998 78999999999999999999999999999999999999998 8
Q ss_pred CeEEEEeeccccccccCHHHHHHHHHHHhcCCccc
Q 039436 386 KLGLVMADWARRDEIVTSNVIENAVKRLMASKEGD 420 (422)
Q Consensus 386 g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~ 420 (422)
|+|..+. ...+++++|.++|+++|.|++++
T Consensus 334 g~g~~l~-----~~~~~~~~l~~ai~~~l~~~~~~ 363 (392)
T TIGR01426 334 GLGRHLP-----PEEVTAEKLREAVLAVLSDPRYA 363 (392)
T ss_pred CCEEEec-----cccCCHHHHHHHHHHHhcCHHHH
Confidence 9999987 56789999999999999988754
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=1.6e-44 Score=365.72 Aligned_cols=168 Identities=29% Similarity=0.518 Sum_probs=135.0
Q ss_pred CcccccCCCCcCCCCCCCCCCCccccHHHhhcccCCcceEEecCCccc-CcHHHHHHHHHHHhhCCCeeEEEEecCCCCC
Q 039436 224 FNHWALGPFNPVTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTA-MSDEQIKELAVGLKQSNQKFIWVLRDADRGD 302 (422)
Q Consensus 224 ~~~~~VGPl~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~ 302 (422)
|++.+||++..... .+.+.++..|+++..+++||||||||+.. ++.+.++++++++++.+++|||++.+..
T Consensus 246 p~v~~vGgl~~~~~-----~~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~--- 317 (500)
T PF00201_consen 246 PNVVEVGGLHIKPA-----KPLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEP--- 317 (500)
T ss_dssp CTSTTGCGC-S---------TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSH---
T ss_pred hcccccCccccccc-----cccccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCcccccccccc---
Confidence 79999999864221 24577889999975568999999999965 4445588899999999999999997632
Q ss_pred ccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHH
Q 039436 303 VFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLIT 382 (422)
Q Consensus 303 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~ 382 (422)
...+|+ |+++.+|+||.+||.||++++||||||+||++||+++|||||++|+++||+.||++++
T Consensus 318 -------~~~l~~---------n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~ 381 (500)
T PF00201_consen 318 -------PENLPK---------NVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVE 381 (500)
T ss_dssp -------GCHHHT---------TEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHH
T ss_pred -------cccccc---------eEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEE
Confidence 222333 8899999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCeEEEEeeccccccccCHHHHHHHHHHHhcCCcccC
Q 039436 383 HLLKLGLVMADWARRDEIVTSNVIENAVKRLMASKEGDE 421 (422)
Q Consensus 383 ~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~ 421 (422)
+ .|+|+.++ ...+|.++|.++|+++|+|++|++
T Consensus 382 ~-~G~g~~l~-----~~~~~~~~l~~ai~~vl~~~~y~~ 414 (500)
T PF00201_consen 382 E-KGVGVVLD-----KNDLTEEELRAAIREVLENPSYKE 414 (500)
T ss_dssp H-TTSEEEEG-----GGC-SHHHHHHHHHHHHHSHHHHH
T ss_pred E-EeeEEEEE-----ecCCcHHHHHHHHHHHHhhhHHHH
Confidence 9 79999998 668999999999999999998874
No 24
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=3.8e-41 Score=336.47 Aligned_cols=367 Identities=15% Similarity=0.132 Sum_probs=235.0
Q ss_pred cccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCC-C-CCCC--CCC
Q 039436 2 VPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYP-C-PPPN--PNA 77 (422)
Q Consensus 2 vp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~-~-~~~~--~~~ 77 (422)
+|.++.+|..=+-.|+++|++|||+||++++.... ..... ...+++...++..... . .... ...
T Consensus 27 ~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~-~~~~~-----------~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 94 (507)
T PHA03392 27 FPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRV-YYASH-----------LCGNITEIDASLSVEYFKKLVKSSAVFR 94 (507)
T ss_pred cCCCCCcHHHHHHHHHHHHHHcCCeEEEEeccccc-ccccC-----------CCCCEEEEEcCCChHHHHHHHhhhhHHH
Confidence 36689999999999999999999999999875311 11100 0125554444210000 0 0000 000
Q ss_pred CCCCCCcchh----hHHH-hhhc-----hHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHH
Q 039436 78 ACKFPSHIIP----CCEA-SKHL-----RHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTL 147 (422)
Q Consensus 78 ~~~~~~~~~~----~~~~-~~~~-----~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~ 147 (422)
.......... .... ...+ .+.+.++++. ++.++|+||+|.+..++..+|+++.++|.|.+++......
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~--~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~ 172 (507)
T PHA03392 95 KRGVVADSSTVTADNYMGLVRMISDQFDLPNVKNLIAN--KNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAE 172 (507)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhc--CCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchh
Confidence 0000000000 0011 1111 2223333321 2447999999999889998998875699877766443211
Q ss_pred HHHHHHhcCCCC---CCCCCCCCCCCCCCCCCCCchh--------HHH--------HHHHHH--------hhhhcCCeEE
Q 039436 148 YLYIWERMGNPN---LNEASGLIPKDVPSLEGCFTSE--------FLD--------SIASEY--------DHMKFNSGNV 200 (422)
Q Consensus 148 ~~~~~~~~~~~~---~~~~~~l~~~~lp~~~~~~~~~--------~~~--------~~~~~~--------~~~~~~~~~l 200 (422)
.. .... +.+. ..|.......+-.++....... ... ..++.+ +..++.+.++
T Consensus 173 ~~-~~~g-g~p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~l 250 (507)
T PHA03392 173 NF-ETMG-AVSRHPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLF 250 (507)
T ss_pred HH-Hhhc-cCCCCCeeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEE
Confidence 11 1111 0111 0111111111111110000000 000 011111 1123456789
Q ss_pred ecChhhccHHHHHHHHHhhhccCCcccccCCCCcCCCCCCCCCCCccccHHHhhcccCCcceEEecCCcc---cCcHHHH
Q 039436 201 YNTSRVIESAYMDLLEKATVAETFNHWALGPFNPVTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTT---AMSDEQI 277 (422)
Q Consensus 201 vnt~~~le~~~~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~---~~~~~~~ 277 (422)
+|+...++.+ ++ .++++.+||++..... ...+.++++.+|+++++ +++|||||||+. ..+.+.+
T Consensus 251 vns~~~~d~~-----rp----~~p~v~~vGgi~~~~~---~~~~l~~~l~~fl~~~~-~g~V~vS~GS~~~~~~~~~~~~ 317 (507)
T PHA03392 251 VNVHPVFDNN-----RP----VPPSVQYLGGLHLHKK---PPQPLDDYLEEFLNNST-NGVVYVSFGSSIDTNDMDNEFL 317 (507)
T ss_pred EecCccccCC-----CC----CCCCeeeecccccCCC---CCCCCCHHHHHHHhcCC-CcEEEEECCCCCcCCCCCHHHH
Confidence 9998877764 22 2489999999975321 11345788999999864 579999999985 3577889
Q ss_pred HHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHH
Q 039436 278 KELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCME 357 (422)
Q Consensus 278 ~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~e 357 (422)
+.+++++++.+.+|||+.+.... ...+|+ |+++.+|+||.+||+||++++||||||+||++|
T Consensus 318 ~~~l~a~~~l~~~viw~~~~~~~---------~~~~p~---------Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~E 379 (507)
T PHA03392 318 QMLLRTFKKLPYNVLWKYDGEVE---------AINLPA---------NVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDE 379 (507)
T ss_pred HHHHHHHHhCCCeEEEEECCCcC---------cccCCC---------ceEEecCCCHHHHhcCCCCCEEEecCCcccHHH
Confidence 99999999999999999875431 012343 899999999999999999999999999999999
Q ss_pred HHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcCCcccC
Q 039436 358 SITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMASKEGDE 421 (422)
Q Consensus 358 al~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~ 421 (422)
|+++|||||++|+++||+.||+|+++ +|+|+.++ ...+++++|+++|+++|+|++|++
T Consensus 380 al~~GvP~v~iP~~~DQ~~Na~rv~~-~G~G~~l~-----~~~~t~~~l~~ai~~vl~~~~y~~ 437 (507)
T PHA03392 380 AIDALVPMVGLPMMGDQFYNTNKYVE-LGIGRALD-----TVTVSAAQLVLAIVDVIENPKYRK 437 (507)
T ss_pred HHHcCCCEEECCCCccHHHHHHHHHH-cCcEEEec-----cCCcCHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999999999999998 89999998 567899999999999999998874
No 25
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=3.9e-41 Score=340.90 Aligned_cols=383 Identities=25% Similarity=0.349 Sum_probs=229.5
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACK 80 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~ 80 (422)
++++|++||++|+++||++|+++||+||++++............ .... ..+.....++.......+.......
T Consensus 10 l~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (496)
T KOG1192|consen 10 LVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKSSK---SKSI----KKINPPPFEFLTIPDGLPEGWEDDD 82 (496)
T ss_pred EEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCccc---ceee----eeeecChHHhhhhhhhhccchHHHH
Confidence 57899999999999999999999999999999875443321000 0000 0011111110000000000000000
Q ss_pred CCCcchhhH-HHhhhchHHHHHHHHHhcc--CCCeeEEEEcCCchhHHHHHhhCCC-CceEEeechHHHHHHHHHHHhcC
Q 039436 81 FPSHIIPCC-EASKHLRHPLATLLNTLSA--TARRVVVIHDSLMASVIQDVCLIPN-AESYTFHSVSAFTLYLYIWERMG 156 (422)
Q Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~l~~l~~--~~~~d~VI~D~~~~~~~~vA~~l~G-IP~v~~~~~~~~~~~~~~~~~~~ 156 (422)
....... .....+...+.+....+.. ..++|++|+|.+..|...+|.+. + |+...+++.++............
T Consensus 83 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~g~~~~~~ 159 (496)
T KOG1192|consen 83 --LDISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPS-FVIPLLSFPTSSAVLLALGLPSPLS 159 (496)
T ss_pred --HHHHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccc-eEEEeecccCchHHHHhcCCcCccc
Confidence 0000001 1123333344443333221 11389999999887888888777 5 89888887776544332111100
Q ss_pred CCCCCCCCCCCCC-CCCCCCCCCc----hhHHHHHH---------H----HHhhh----hcCCeEEecC-hhhccHHHHH
Q 039436 157 NPNLNEASGLIPK-DVPSLEGCFT----SEFLDSIA---------S----EYDHM----KFNSGNVYNT-SRVIESAYMD 213 (422)
Q Consensus 157 ~~~~~~~~~l~~~-~lp~~~~~~~----~~~~~~~~---------~----~~~~~----~~~~~~lvnt-~~~le~~~~~ 213 (422)
. .+....... +...+..... ..+..... . ..... .....++.|+ +..++.....
T Consensus 160 ~---~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~ 236 (496)
T KOG1192|consen 160 Y---VPSPFSLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPLL 236 (496)
T ss_pred c---cCcccCccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCccc
Confidence 0 000000000 0000000000 00000000 0 00000 1122455555 6666665443
Q ss_pred HHHHhhhccCCcccccCCCCcCCCCCCCCCCCccccHHHhhcccCC--cceEEecCCcc---cCcHHHHHHHHHHHhhC-
Q 039436 214 LLEKATVAETFNHWALGPFNPVTLPNKGGSNGRHFCLEWLDKQEKN--SVLYVSFGTTT---AMSDEQIKELAVGLKQS- 287 (422)
Q Consensus 214 ~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~wl~~~~~~--~vv~vs~Gs~~---~~~~~~~~~~~~~l~~~- 287 (422)
.++... ..+++++|||+...... .....+.+|++..+.. +||||||||+. .++.+++.+++.+|+.+
T Consensus 237 ~~~~~~--~~~~v~~IG~l~~~~~~-----~~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~ 309 (496)
T KOG1192|consen 237 DFEPRP--LLPKVIPIGPLHVKDSK-----QKSPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQ 309 (496)
T ss_pred CCCCCC--CCCCceEECcEEecCcc-----ccccccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCC
Confidence 332221 24899999999764110 1112688999988776 99999999998 89999999999999999
Q ss_pred CCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhh-hhcccccceeecCChhhHHHHHhcCCcEE
Q 039436 288 NQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEI-LAHCSTGGFMSHCGWNSCMESITMGVPIV 366 (422)
Q Consensus 288 ~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~i-l~~~~~~~~i~HgG~~s~~eal~~GvP~v 366 (422)
+++|+|+++.... ..+++++.++ ...|++..+|+||.++ |+|+++++|||||||||++|++++|||||
T Consensus 310 ~~~FiW~~~~~~~----------~~~~~~~~~~-~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v 378 (496)
T KOG1192|consen 310 GVTFLWKYRPDDS----------IYFPEGLPNR-GRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMV 378 (496)
T ss_pred CceEEEEecCCcc----------hhhhhcCCCC-CcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCcee
Confidence 8899999987641 1133444433 3346777799999999 59999999999999999999999999999
Q ss_pred ccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcCCccc
Q 039436 367 AWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMASKEGD 420 (422)
Q Consensus 367 ~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~ 420 (422)
++|+++||+.||+++++++++++... .+++.+++..++++++++++|+
T Consensus 379 ~~Plf~DQ~~Na~~i~~~g~~~v~~~------~~~~~~~~~~~~~~il~~~~y~ 426 (496)
T KOG1192|consen 379 CVPLFGDQPLNARLLVRHGGGGVLDK------RDLVSEELLEAIKEILENEEYK 426 (496)
T ss_pred cCCccccchhHHHHHHhCCCEEEEeh------hhcCcHHHHHHHHHHHcChHHH
Confidence 99999999999999999655555553 3444444888888888777765
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=100.00 E-value=1.8e-40 Score=327.20 Aligned_cols=346 Identities=14% Similarity=0.130 Sum_probs=221.8
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCC--
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAA-- 78 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~-- 78 (422)
|+++|+.||++|++.||++|++|||+|+|++++.+++.+++. |++|.+++ .+...........
T Consensus 5 ~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v~~~--------------G~~~~~~~-~~~~~~~~~~~~~~~ 69 (401)
T cd03784 5 ITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEAA--------------GLEFVPVG-GDPDELLASPERNAG 69 (401)
T ss_pred EEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHHHHc--------------CCceeeCC-CCHHHHHhhhhhccc
Confidence 478999999999999999999999999999999998888876 88888875 1110000000000
Q ss_pred --CCCCCcchhhHHH-hhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhc
Q 039436 79 --CKFPSHIIPCCEA-SKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERM 155 (422)
Q Consensus 79 --~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~ 155 (422)
............. .......+.++++. ...+++|+||+|.+..++..+|+++ |||++.+++++.....
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~pDlvi~d~~~~~~~~~A~~~-giP~v~~~~~~~~~~~------- 140 (401)
T cd03784 70 LLLLGPGLLLGALRLLRREAEAMLDDLVAA-ARDWGPDLVVADPLAFAGAVAAEAL-GIPAVRLLLGPDTPTS------- 140 (401)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHH-hcccCCCEEEeCcHHHHHHHHHHHh-CCCeEEeecccCCccc-------
Confidence 0000111111111 22223333333333 2346899999999999999999999 9999999876542100
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCc-----hhHHHHHHHHHhhhhcCC-------------eEEecChhhccHHHHHHHHH
Q 039436 156 GNPNLNEASGLIPKDVPSLEGCFT-----SEFLDSIASEYDHMKFNS-------------GNVYNTSRVIESAYMDLLEK 217 (422)
Q Consensus 156 ~~~~~~~~~~l~~~~lp~~~~~~~-----~~~~~~~~~~~~~~~~~~-------------~~lvnt~~~le~~~~~~~~~ 217 (422)
..++.. ........ ..+...+....+..++.. ..+......+. ....
T Consensus 141 ---------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 205 (401)
T cd03784 141 ---------AFPPPL-GRANLRLYALLEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVL-----PPPP 205 (401)
T ss_pred ---------cCCCcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccC-----CCCC
Confidence 000000 00000000 000011111111111111 11111111111 1111
Q ss_pred hhhccCCcccccC-CCCcCCCCCCCCCCCccccHHHhhcccCCcceEEecCCcccCcH-HHHHHHHHHHhhCCCeeEEEE
Q 039436 218 ATVAETFNHWALG-PFNPVTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSD-EQIKELAVGLKQSNQKFIWVL 295 (422)
Q Consensus 218 ~~~~~~~~~~~VG-Pl~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~-~~~~~~~~~l~~~~~~~v~~~ 295 (422)
.+ +++..++| ++..... ....+.++..|++. .+++|||+|||+..... ..+..++++++..+.++||++
T Consensus 206 ~~---~~~~~~~g~~~~~~~~----~~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~ 276 (401)
T cd03784 206 DW---PRFDLVTGYGFRDVPY----NGPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSL 276 (401)
T ss_pred Cc---cccCcEeCCCCCCCCC----CCCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEc
Confidence 11 24445554 3322111 12346678889876 46789999999977555 456779999999999999998
Q ss_pred ecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchh
Q 039436 296 RDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQP 375 (422)
Q Consensus 296 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~ 375 (422)
+..... ...+ ..|+++.+|+||..+|+| +++||||||+||++||+++|||+|++|+..||+
T Consensus 277 g~~~~~--------~~~~---------~~~v~~~~~~p~~~ll~~--~d~~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~ 337 (401)
T cd03784 277 GWGGLG--------AEDL---------PDNVRVVDFVPHDWLLPR--CAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQP 337 (401)
T ss_pred cCcccc--------ccCC---------CCceEEeCCCCHHHHhhh--hheeeecCCchhHHHHHHcCCCEEeeCCCCCcH
Confidence 865310 0112 338899999999999999 889999999999999999999999999999999
Q ss_pred hHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcCCcc
Q 039436 376 RNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMASKEG 419 (422)
Q Consensus 376 ~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~ 419 (422)
.||+++++ +|+|+.+. ...+++++|.++++++++++.+
T Consensus 338 ~~a~~~~~-~G~g~~l~-----~~~~~~~~l~~al~~~l~~~~~ 375 (401)
T cd03784 338 FWAARVAE-LGAGPALD-----PRELTAERLAAALRRLLDPPSR 375 (401)
T ss_pred HHHHHHHH-CCCCCCCC-----cccCCHHHHHHHHHHHhCHHHH
Confidence 99999998 89999997 4458999999999999986543
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-36 Score=291.16 Aligned_cols=357 Identities=18% Similarity=0.218 Sum_probs=212.6
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACK 80 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~ 80 (422)
++..|..||++|++.||++|.++||+|+|++++.+.+.++++ |+.|..++..+.. .....
T Consensus 6 ~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve~a--------------g~~f~~~~~~~~~---~~~~~--- 65 (406)
T COG1819 6 FVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAA--------------GLAFVAYPIRDSE---LATED--- 65 (406)
T ss_pred EEeccccccccchHHHHHHHHhcCCeEEEEeCHHHHHHHHHh--------------CcceeeccccCCh---hhhhh---
Confidence 356778999999999999999999999999999999999998 6777776522211 11110
Q ss_pred CCCcchhhHH-HhhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhcCCCC
Q 039436 81 FPSHIIPCCE-ASKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERMGNPN 159 (422)
Q Consensus 81 ~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (422)
........+. ....+.-...+.++-+.+ ..+|+++.|...+.+ .+++.. ++|++......................
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (406)
T COG1819 66 GKFAGVKSFRRLLQQFKKLIRELLELLRE-LEPDLVVDDARLSLG-LAARLL-GIPVVGINVAPYTPLPAAGLPLPPVGI 142 (406)
T ss_pred hhhhccchhHHHhhhhhhhhHHHHHHHHh-cchhhhhcchhhhhh-hhhhhc-ccchhhhhhhhccCCcccccCcccccc
Confidence 0111111111 122222233333322222 256677777654434 777778 888775433322100000000000000
Q ss_pred CCCCCCCCCCCCCCC-CC-CCch-hH-HHHHHHHHhhhhcCC---eEEecChhhccHHHHHHHHHhhh---ccCCccccc
Q 039436 160 LNEASGLIPKDVPSL-EG-CFTS-EF-LDSIASEYDHMKFNS---GNVYNTSRVIESAYMDLLEKATV---AETFNHWAL 229 (422)
Q Consensus 160 ~~~~~~l~~~~lp~~-~~-~~~~-~~-~~~~~~~~~~~~~~~---~~lvnt~~~le~~~~~~~~~~~~---~~~~~~~~V 229 (422)
.....++...++.. .. .... .. .....+....+.... .-+..+-..++..+.+. .++ ..+....++
T Consensus 143 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~ 218 (406)
T COG1819 143 -AGKLPIPLYPLPPRLVRPLIFARSWLPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDV---LFPPGDRLPFIGPYI 218 (406)
T ss_pred -cccccccccccChhhccccccchhhhhhhhhhhhccccccccchHHHhcCCCCcccccccc---ccCCCCCCCCCcCcc
Confidence 00000111111110 00 0000 00 000111000000000 00111111111111110 000 001233344
Q ss_pred CCCCcCCCCCCCCCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchh
Q 039436 230 GPFNPVTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVR 309 (422)
Q Consensus 230 GPl~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 309 (422)
||+.. ....+...|.. .++++||+||||.... .+.++.+++++++++.++|...+... .+
T Consensus 219 ~~~~~---------~~~~~~~~~~~--~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~~-~~------- 278 (406)
T COG1819 219 GPLLG---------EAANELPYWIP--ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGAR-DT------- 278 (406)
T ss_pred ccccc---------cccccCcchhc--CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccccc-cc-------
Confidence 44432 23344445544 3468899999999877 78888899999999999999887622 11
Q ss_pred cccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEE
Q 039436 310 RAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGL 389 (422)
Q Consensus 310 ~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~ 389 (422)
...+|+ |+++.+|+||..+|++ +++||||||+||++|||++|||+|++|...||+.||.++++ +|+|+
T Consensus 279 ~~~~p~---------n~~v~~~~p~~~~l~~--ad~vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~-~G~G~ 346 (406)
T COG1819 279 LVNVPD---------NVIVADYVPQLELLPR--ADAVIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEE-LGAGI 346 (406)
T ss_pred cccCCC---------ceEEecCCCHHHHhhh--cCEEEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHH-cCCce
Confidence 334665 8899999999999999 88999999999999999999999999999999999999998 89999
Q ss_pred EEeeccccccccCHHHHHHHHHHHhcCCcccC
Q 039436 390 VMADWARRDEIVTSNVIENAVKRLMASKEGDE 421 (422)
Q Consensus 390 ~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~ 421 (422)
.+. ...++++.++++|+++|+|+.+++
T Consensus 347 ~l~-----~~~l~~~~l~~av~~vL~~~~~~~ 373 (406)
T COG1819 347 ALP-----FEELTEERLRAAVNEVLADDSYRR 373 (406)
T ss_pred ecC-----cccCCHHHHHHHHHHHhcCHHHHH
Confidence 997 668999999999999999988764
No 28
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.89 E-value=3.6e-21 Score=183.79 Aligned_cols=301 Identities=17% Similarity=0.179 Sum_probs=181.7
Q ss_pred CCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCc
Q 039436 5 PAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACKFPSH 84 (422)
Q Consensus 5 p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~~~~~ 84 (422)
-+.||+...+.||++| |||+|+|++.....+.+... +.+..++ +.... ......+....
T Consensus 10 ~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~~---------------~~~~~~~--~~~~~--~~~~~~~~~~~ 68 (318)
T PF13528_consen 10 HGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKPR---------------FPVREIP--GLGPI--QENGRLDRWKT 68 (318)
T ss_pred CCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhccc---------------cCEEEcc--CceEe--ccCCccchHHH
Confidence 4889999999999999 69999999988654444321 2333332 11100 00001111111
Q ss_pred chhhHHHhhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhcCCCCCCCCC
Q 039436 85 IIPCCEASKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERMGNPNLNEAS 164 (422)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (422)
..............++++.+.+. ..+||+||+|. .+.+..+|+.. |||++.+........ .
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~-~~~pDlVIsD~-~~~~~~aa~~~-giP~i~i~~~~~~~~----------------~ 129 (318)
T PF13528_consen 69 VRNNIRWLARLARRIRREIRWLR-EFRPDLVISDF-YPLAALAARRA-GIPVIVISNQYWFLH----------------P 129 (318)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEcC-hHHHHHHHHhc-CCCEEEEEehHHccc----------------c
Confidence 11110001122333344333333 34799999994 55677889999 999998776543100 0
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHhh--hhcCCeEEecChhhccHHHHHHHHHhhhccCCcccccCCCCcCCCCCCCC
Q 039436 165 GLIPKDVPSLEGCFTSEFLDSIASEYDH--MKFNSGNVYNTSRVIESAYMDLLEKATVAETFNHWALGPFNPVTLPNKGG 242 (422)
Q Consensus 165 ~l~~~~lp~~~~~~~~~~~~~~~~~~~~--~~~~~~~lvnt~~~le~~~~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~ 242 (422)
.. .++ ....+...+.+.... ...++..+.-++. .... ...+...+||+.......
T Consensus 130 ~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~-----------~~~~~~~~~p~~~~~~~~--- 186 (318)
T PF13528_consen 130 NF---WLP-----WDQDFGRLIERYIDRYHFPPADRRLALSFY-PPLP-----------PFFRVPFVGPIIRPEIRE--- 186 (318)
T ss_pred cC---Ccc-----hhhhHHHHHHHhhhhccCCcccceecCCcc-cccc-----------ccccccccCchhcccccc---
Confidence 00 011 011122222222221 3344444544443 1100 013466788886422110
Q ss_pred CCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCC-CeeEEEEecCCCCCccccchhcccCChhhHhhc
Q 039436 243 SNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSN-QKFIWVLRDADRGDVFNGEVRRAELPKAYEDSV 321 (422)
Q Consensus 243 ~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~ 321 (422)
... .+++.|+|+||..... .++++++..+ .+|++. +... . . .
T Consensus 187 ---------~~~--~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~-~---------~---------~ 229 (318)
T PF13528_consen 187 ---------LPP--EDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNA-A---------D---------P 229 (318)
T ss_pred ---------cCC--CCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCc-c---------c---------c
Confidence 001 1345699999988653 6667777666 566655 4332 0 0 1
Q ss_pred cCCCeEEeccc--chhhhhhcccccceeecCChhhHHHHHhcCCcEEccCc--ccchhhHHHHHHhhcCeEEEEeecccc
Q 039436 322 KDKGLVVRDWA--PQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPM--HSDQPRNTLLITHLLKLGLVMADWARR 397 (422)
Q Consensus 322 ~~~~~~~~~~~--pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~--~~Dq~~na~~~~~~~g~g~~~~~~~~~ 397 (422)
...|+.+.+|. ....++.. ++++|+|||+||++|++++|+|+|++|. ..||..||+++++ +|+|+.+.
T Consensus 230 ~~~ni~~~~~~~~~~~~~m~~--ad~vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~-~G~~~~~~----- 301 (318)
T PF13528_consen 230 RPGNIHVRPFSTPDFAELMAA--ADLVISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEE-LGLGIVLS----- 301 (318)
T ss_pred cCCCEEEeecChHHHHHHHHh--CCEEEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHH-CCCeEEcc-----
Confidence 13488888875 45667877 8899999999999999999999999999 7899999999998 89999997
Q ss_pred ccccCHHHHHHHHHHH
Q 039436 398 DEIVTSNVIENAVKRL 413 (422)
Q Consensus 398 ~~~~~~~~l~~av~~~ 413 (422)
..+++++.|+++|+++
T Consensus 302 ~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 302 QEDLTPERLAEFLERL 317 (318)
T ss_pred cccCCHHHHHHHHhcC
Confidence 6789999999999864
No 29
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.87 E-value=1.2e-19 Score=173.33 Aligned_cols=126 Identities=15% Similarity=0.250 Sum_probs=91.0
Q ss_pred CcceEEecCCcccCcHHHHHHHHHHHhhCCC-eeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccc--hh
Q 039436 259 NSVLYVSFGTTTAMSDEQIKELAVGLKQSNQ-KFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAP--QL 335 (422)
Q Consensus 259 ~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~-~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p--q~ 335 (422)
++.|+|.+||... ..++++|++.+. .|+ ++.... . ...++ .|+.+.+|.| ..
T Consensus 188 ~~~iLv~~g~~~~------~~l~~~l~~~~~~~~i--~~~~~~-~-------~~~~~---------~~v~~~~~~~~~~~ 242 (321)
T TIGR00661 188 EDYILVYIGFEYR------YKILELLGKIANVKFV--CYSYEV-A-------KNSYN---------ENVEIRRITTDNFK 242 (321)
T ss_pred CCcEEEECCcCCH------HHHHHHHHhCCCeEEE--EeCCCC-C-------ccccC---------CCEEEEECChHHHH
Confidence 4568888888542 345677766653 444 222210 0 01122 3788889997 34
Q ss_pred hhhhcccccceeecCChhhHHHHHhcCCcEEccCccc--chhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHH
Q 039436 336 EILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHS--DQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRL 413 (422)
Q Consensus 336 ~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~--Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~ 413 (422)
..|+. ++++|||||++|++||+++|+|++++|... ||..||+.+++ .|+|+.++ ..++ ++.+++.++
T Consensus 243 ~~l~~--ad~vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~-~g~~~~l~-----~~~~---~~~~~~~~~ 311 (321)
T TIGR00661 243 ELIKN--AELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLED-LGCGIALE-----YKEL---RLLEAILDI 311 (321)
T ss_pred HHHHh--CCEEEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHH-CCCEEEcC-----hhhH---HHHHHHHhc
Confidence 44555 999999999999999999999999999955 89999999998 79999997 3333 667777788
Q ss_pred hcCCccc
Q 039436 414 MASKEGD 420 (422)
Q Consensus 414 l~~~~~~ 420 (422)
++|++|+
T Consensus 312 ~~~~~~~ 318 (321)
T TIGR00661 312 RNMKRYK 318 (321)
T ss_pred ccccccc
Confidence 8888876
No 30
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.86 E-value=6.3e-20 Score=176.63 Aligned_cols=307 Identities=16% Similarity=0.118 Sum_probs=183.4
Q ss_pred ccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCch--hhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCC
Q 039436 3 PFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNR--QAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACK 80 (422)
Q Consensus 3 p~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~--~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~ 80 (422)
.-++-||+.|.+.||++|.++||+|.|+++..-.+ .+.. .|+.|..++. . ....
T Consensus 8 ~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l~~~--------------~g~~~~~~~~-~-------~l~~-- 63 (352)
T PRK12446 8 GGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTIIEK--------------ENIPYYSISS-G-------KLRR-- 63 (352)
T ss_pred cCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccccCcc--------------cCCcEEEEec-c-------CcCC--
Confidence 34567999999999999999999999999776322 1111 2677777741 1 0000
Q ss_pred CCCcchhhHHHhhhchHHHHHHHHHhccCCCeeEEEEcCCch--hHHHHHhhCCCCceEEeechHHHHHHHHHHHhcCCC
Q 039436 81 FPSHIIPCCEASKHLRHPLATLLNTLSATARRVVVIHDSLMA--SVIQDVCLIPNAESYTFHSVSAFTLYLYIWERMGNP 158 (422)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~--~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~~~~ 158 (422)
...+ ..+...-.+...+...++-+ ...+||+||...... .+..+|+.+ |+|+++.-....
T Consensus 64 -~~~~-~~~~~~~~~~~~~~~~~~i~-~~~kPdvvi~~Ggy~s~p~~~aa~~~-~~p~~i~e~n~~-------------- 125 (352)
T PRK12446 64 -YFDL-KNIKDPFLVMKGVMDAYVRI-RKLKPDVIFSKGGFVSVPVVIGGWLN-RVPVLLHESDMT-------------- 125 (352)
T ss_pred -CchH-HHHHHHHHHHHHHHHHHHHH-HhcCCCEEEecCchhhHHHHHHHHHc-CCCEEEECCCCC--------------
Confidence 0011 11111111111222222222 224789999765433 256777888 999986543211
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhhhccCCcccccCCCCcCCCC
Q 039436 159 NLNEASGLIPKDVPSLEGCFTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKATVAETFNHWALGPFNPVTLP 238 (422)
Q Consensus 159 ~~~~~~~l~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~~~~~~~~~~VGPl~~~~~~ 238 (422)
|. ...+++. +-++.+. .+|++ ....+ ...++..+|+-+.....
T Consensus 126 -------------~g-------~~nr~~~------~~a~~v~-~~f~~----~~~~~------~~~k~~~tG~Pvr~~~~ 168 (352)
T PRK12446 126 -------------PG-------LANKIAL------RFASKIF-VTFEE----AAKHL------PKEKVIYTGSPVREEVL 168 (352)
T ss_pred -------------cc-------HHHHHHH------HhhCEEE-EEccc----hhhhC------CCCCeEEECCcCCcccc
Confidence 11 0111111 1222232 22321 11111 12467888876543211
Q ss_pred CCCCCCCccccHHHhhcccCCcceEEecCCcccCcHHH-HHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhh
Q 039436 239 NKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQ-IKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAY 317 (422)
Q Consensus 239 ~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~-~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~ 317 (422)
. .......+-+.-.+++++|+|.-||.......+ +.+++..+.. +.+++|.+|.+.. + +..
T Consensus 169 ~----~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~~----------~---~~~ 230 (352)
T PRK12446 169 K----GNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGNL----------D---DSL 230 (352)
T ss_pred c----ccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCchH----------H---HHH
Confidence 0 011111112222234678999999998766643 4445555532 4788998886531 0 101
Q ss_pred HhhccCCCeEEeccc-c-hhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcc-----cchhhHHHHHHhhcCeEEE
Q 039436 318 EDSVKDKGLVVRDWA-P-QLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMH-----SDQPRNTLLITHLLKLGLV 390 (422)
Q Consensus 318 ~~~~~~~~~~~~~~~-p-q~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~-----~Dq~~na~~~~~~~g~g~~ 390 (422)
. +. .+..+.+|+ + -..++.+ ++++|||||.+|+.|++++|+|+|++|+. .||..||+.+++ .|+|..
T Consensus 231 ~-~~--~~~~~~~f~~~~m~~~~~~--adlvIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~-~g~~~~ 304 (352)
T PRK12446 231 Q-NK--EGYRQFEYVHGELPDILAI--TDFVISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFER-QGYASV 304 (352)
T ss_pred h-hc--CCcEEecchhhhHHHHHHh--CCEEEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHH-CCCEEE
Confidence 0 01 144455776 3 5568877 88999999999999999999999999985 489999999999 799999
Q ss_pred EeeccccccccCHHHHHHHHHHHhcCC
Q 039436 391 MADWARRDEIVTSNVIENAVKRLMASK 417 (422)
Q Consensus 391 ~~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (422)
+. ..+++++.|.+++++++.|+
T Consensus 305 l~-----~~~~~~~~l~~~l~~ll~~~ 326 (352)
T PRK12446 305 LY-----EEDVTVNSLIKHVEELSHNN 326 (352)
T ss_pred cc-----hhcCCHHHHHHHHHHHHcCH
Confidence 97 56889999999999999875
No 31
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.69 E-value=2.7e-15 Score=143.13 Aligned_cols=137 Identities=18% Similarity=0.262 Sum_probs=102.8
Q ss_pred CCcceEEecCCcccCcHHH-HHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCC-eEEecccch-
Q 039436 258 KNSVLYVSFGTTTAMSDEQ-IKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKG-LVVRDWAPQ- 334 (422)
Q Consensus 258 ~~~vv~vs~Gs~~~~~~~~-~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~-~~~~~~~pq- 334 (422)
.+++|+|.-||+....-.+ +.++...+.+ +..+++.++.+. .+.........+ +.+.+|..+
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~--------------~~~~~~~~~~~~~~~v~~f~~dm 246 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND--------------LEELKSAYNELGVVRVLPFIDDM 246 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch--------------HHHHHHHHhhcCcEEEeeHHhhH
Confidence 4678999999997655443 3335555554 567777766542 122223333334 677777754
Q ss_pred hhhhhcccccceeecCChhhHHHHHhcCCcEEccCc-cc---chhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHH
Q 039436 335 LEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPM-HS---DQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAV 410 (422)
Q Consensus 335 ~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~-~~---Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av 410 (422)
..+++- ++++||+.|.+|+.|++++|+|.|.+|. .+ +|..||+.+++ .|.|..++ ..++|.+++.+.|
T Consensus 247 ~~~~~~--ADLvIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~-~gaa~~i~-----~~~lt~~~l~~~i 318 (357)
T COG0707 247 AALLAA--ADLVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEK-AGAALVIR-----QSELTPEKLAELI 318 (357)
T ss_pred HHHHHh--ccEEEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHh-CCCEEEec-----cccCCHHHHHHHH
Confidence 335544 8899999999999999999999999997 23 88999999999 79999998 6679999999999
Q ss_pred HHHhcCC
Q 039436 411 KRLMASK 417 (422)
Q Consensus 411 ~~~l~~~ 417 (422)
.+++.++
T Consensus 319 ~~l~~~~ 325 (357)
T COG0707 319 LRLLSNP 325 (357)
T ss_pred HHHhcCH
Confidence 9999873
No 32
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.62 E-value=1.2e-13 Score=133.64 Aligned_cols=312 Identities=15% Similarity=0.117 Sum_probs=175.6
Q ss_pred CCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCc
Q 039436 5 PAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACKFPSH 84 (422)
Q Consensus 5 p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~~~~~ 84 (422)
...||+...+.|++.|.++||+|++++....... ... ...++++..++..... .......
T Consensus 8 ~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~-~~~-----------~~~~~~~~~~~~~~~~--------~~~~~~~ 67 (350)
T cd03785 8 GTGGHIFPALALAEELRERGAEVLFLGTKRGLEA-RLV-----------PKAGIPLHTIPVGGLR--------RKGSLKK 67 (350)
T ss_pred CchhhhhHHHHHHHHHHhCCCEEEEEECCCcchh-hcc-----------cccCCceEEEEecCcC--------CCChHHH
Confidence 4569999999999999999999999987642111 100 0025677776521110 0000000
Q ss_pred chhhHHHhhhchHHHHHHHHHhccCCCeeEEEEcCC--chhHHHHHhhCCCCceEEeechHHHHHHHHHHHhcCCCCCCC
Q 039436 85 IIPCCEASKHLRHPLATLLNTLSATARRVVVIHDSL--MASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERMGNPNLNE 162 (422)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~--~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (422)
+...+.. -.....+..++++ .+||+|+++.. ...+..+|+.. |+|.+.... .
T Consensus 68 ~~~~~~~-~~~~~~~~~~i~~----~~pDvI~~~~~~~~~~~~~~a~~~-~~p~v~~~~-~------------------- 121 (350)
T cd03785 68 LKAPFKL-LKGVLQARKILKK----FKPDVVVGFGGYVSGPVGLAAKLL-GIPLVIHEQ-N------------------- 121 (350)
T ss_pred HHHHHHH-HHHHHHHHHHHHh----cCCCEEEECCCCcchHHHHHHHHh-CCCEEEEcC-C-------------------
Confidence 0011110 0111122233332 47899887642 33456677888 999875211 0
Q ss_pred CCCCCCCCCCCCCCCCchhHHHHHHHHHhhhhcCCeEEecChhhccHHHHHHHHHhhhccCCcccccCCCCcCCCCCCCC
Q 039436 163 ASGLIPKDVPSLEGCFTSEFLDSIASEYDHMKFNSGNVYNTSRVIESAYMDLLEKATVAETFNHWALGPFNPVTLPNKGG 242 (422)
Q Consensus 163 ~~~l~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~ 242 (422)
..+. ...+. ..+.++.+++.+-...+. . ...++..+|..+......
T Consensus 122 -------~~~~-----------~~~~~--~~~~~~~vi~~s~~~~~~---------~--~~~~~~~i~n~v~~~~~~--- 167 (350)
T cd03785 122 -------AVPG-----------LANRL--LARFADRVALSFPETAKY---------F--PKDKAVVTGNPVREEILA--- 167 (350)
T ss_pred -------CCcc-----------HHHHH--HHHhhCEEEEcchhhhhc---------C--CCCcEEEECCCCchHHhh---
Confidence 0010 01111 112356666654322211 1 125666777543211000
Q ss_pred CCCccccHHHhhcccCCcceEEecCCcccCcH-HHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhc
Q 039436 243 SNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSD-EQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSV 321 (422)
Q Consensus 243 ~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~-~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~ 321 (422)
. ... .+.+...+++.+|++..|+...... +.+.+++..+.+.+..+++.++... ...+.+...+ .
T Consensus 168 -~-~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~----------~~~l~~~~~~-~ 233 (350)
T cd03785 168 -L-DRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD----------LEEVKKAYEE-L 233 (350)
T ss_pred -h-hhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc----------HHHHHHHHhc-c
Confidence 0 001 2222222334556666666643222 2233455555433455666665542 1111111111 1
Q ss_pred cCCCeEEeccc-chhhhhhcccccceeecCChhhHHHHHhcCCcEEccCc----ccchhhHHHHHHhhcCeEEEEeeccc
Q 039436 322 KDKGLVVRDWA-PQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPM----HSDQPRNTLLITHLLKLGLVMADWAR 396 (422)
Q Consensus 322 ~~~~~~~~~~~-pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~----~~Dq~~na~~~~~~~g~g~~~~~~~~ 396 (422)
..++.+.+|. ....+|.. ++++|+|+|.++++||+++|+|+|+.|. ..+|..|+..+.+ .|.|..+.
T Consensus 234 -~~~v~~~g~~~~~~~~l~~--ad~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v~---- 305 (350)
T cd03785 234 -GVNYEVFPFIDDMAAAYAA--ADLVISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVK-AGAAVLIP---- 305 (350)
T ss_pred -CCCeEEeehhhhHHHHHHh--cCEEEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh-CCCEEEEe----
Confidence 3478888887 55667776 8899999999999999999999999986 3578999999998 69999997
Q ss_pred cccccCHHHHHHHHHHHhcCCcc
Q 039436 397 RDEIVTSNVIENAVKRLMASKEG 419 (422)
Q Consensus 397 ~~~~~~~~~l~~av~~~l~~~~~ 419 (422)
....+.+++.+++++++.|++.
T Consensus 306 -~~~~~~~~l~~~i~~ll~~~~~ 327 (350)
T cd03785 306 -QEELTPERLAAALLELLSDPER 327 (350)
T ss_pred -cCCCCHHHHHHHHHHHhcCHHH
Confidence 3446899999999999987643
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.59 E-value=2.2e-13 Score=132.19 Aligned_cols=86 Identities=15% Similarity=0.222 Sum_probs=75.3
Q ss_pred eEEeccc-chhhhhhcccccceeecCChhhHHHHHhcCCcEEccCc----ccchhhHHHHHHhhcCeEEEEeeccccccc
Q 039436 326 LVVRDWA-PQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPM----HSDQPRNTLLITHLLKLGLVMADWARRDEI 400 (422)
Q Consensus 326 ~~~~~~~-pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~----~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~ 400 (422)
+.+.+|+ +...+++. ++++|+|+|.++++||+++|+|+|++|. ..||..|+..+.+ .|.|..+. .+.
T Consensus 237 v~~~g~~~~~~~~~~~--~d~~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~~-----~~~ 308 (357)
T PRK00726 237 AEVVPFIDDMAAAYAA--ADLVICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVD-AGAALLIP-----QSD 308 (357)
T ss_pred EEEeehHhhHHHHHHh--CCEEEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH-CCCEEEEE-----ccc
Confidence 6777888 45678877 8899999999999999999999999997 4689999999998 69999997 456
Q ss_pred cCHHHHHHHHHHHhcCCcc
Q 039436 401 VTSNVIENAVKRLMASKEG 419 (422)
Q Consensus 401 ~~~~~l~~av~~~l~~~~~ 419 (422)
++++++.++++++++|++.
T Consensus 309 ~~~~~l~~~i~~ll~~~~~ 327 (357)
T PRK00726 309 LTPEKLAEKLLELLSDPER 327 (357)
T ss_pred CCHHHHHHHHHHHHcCHHH
Confidence 7899999999999998654
No 34
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.49 E-value=8.6e-12 Score=120.50 Aligned_cols=79 Identities=22% Similarity=0.286 Sum_probs=67.1
Q ss_pred chhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcc---cchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHH
Q 039436 333 PQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMH---SDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENA 409 (422)
Q Consensus 333 pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~---~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~a 409 (422)
+...+++. ++++|+++|.++++||+++|+|+|+.|.- .+|..|+..+.+ .|.|..+. .+..+.+++.++
T Consensus 243 ~~~~~l~~--ad~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~-~~~G~~~~-----~~~~~~~~l~~~ 314 (348)
T TIGR01133 243 NMAAAYAA--ADLVISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED-LGAGLVIR-----QKELLPEKLLEA 314 (348)
T ss_pred CHHHHHHh--CCEEEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH-CCCEEEEe-----cccCCHHHHHHH
Confidence 45667777 88999999988999999999999999863 468889999988 79999886 455689999999
Q ss_pred HHHHhcCCcc
Q 039436 410 VKRLMASKEG 419 (422)
Q Consensus 410 v~~~l~~~~~ 419 (422)
++++++|++.
T Consensus 315 i~~ll~~~~~ 324 (348)
T TIGR01133 315 LLKLLLDPAN 324 (348)
T ss_pred HHHHHcCHHH
Confidence 9999988754
No 35
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.46 E-value=6e-12 Score=117.41 Aligned_cols=104 Identities=17% Similarity=0.203 Sum_probs=76.5
Q ss_pred cceEEecCCcccCcHHHHHHHHHHHhhC--CCeeEEEEecCCCCCccccchhcccCChhhHhhcc-CCCeEEecccchh-
Q 039436 260 SVLYVSFGTTTAMSDEQIKELAVGLKQS--NQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVK-DKGLVVRDWAPQL- 335 (422)
Q Consensus 260 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~--~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~~~~~~pq~- 335 (422)
+.|+|+||...... ....++++|.+. +.++.+++|.... ..+.+.+..+ .+|+.+.+++++.
T Consensus 171 ~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~~------------~~~~l~~~~~~~~~i~~~~~~~~m~ 236 (279)
T TIGR03590 171 RRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSNP------------NLDELKKFAKEYPNIILFIDVENMA 236 (279)
T ss_pred CeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCCc------------CHHHHHHHHHhCCCEEEEeCHHHHH
Confidence 45999999765433 334566666653 4567777776531 1123332221 3478888999874
Q ss_pred hhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHH
Q 039436 336 EILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLL 380 (422)
Q Consensus 336 ~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~ 380 (422)
.++.. ++++||+|| +|++|++++|+|+|++|...+|..||+.
T Consensus 237 ~lm~~--aDl~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 237 ELMNE--ADLAIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred HHHHH--CCEEEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 78888 889999999 9999999999999999999999999975
No 36
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.45 E-value=7.4e-15 Score=126.57 Aligned_cols=139 Identities=17% Similarity=0.256 Sum_probs=96.9
Q ss_pred ceEEecCCcccCcHHH-HHHHHHHHhhC--CCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccc-hhh
Q 039436 261 VLYVSFGTTTAMSDEQ-IKELAVGLKQS--NQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAP-QLE 336 (422)
Q Consensus 261 vv~vs~Gs~~~~~~~~-~~~~~~~l~~~--~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p-q~~ 336 (422)
+|+|+.||.....-.. +.++...+... ...+++++|.... ......+. ....++.+.+|.+ ...
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~----------~~~~~~~~--~~~~~v~~~~~~~~m~~ 68 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNY----------EELKIKVE--NFNPNVKVFGFVDNMAE 68 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCEC----------HHHCCCHC--CTTCCCEEECSSSSHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcH----------HHHHHHHh--ccCCcEEEEechhhHHH
Confidence 4899999886532222 22344444332 4678888776531 10111110 0014788899999 888
Q ss_pred hhhcccccceeecCChhhHHHHHhcCCcEEccCccc----chhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHH
Q 039436 337 ILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHS----DQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKR 412 (422)
Q Consensus 337 il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~----Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~ 412 (422)
++.. ++++|||||.||++|++++|+|+|++|... +|..||..+++ .|+|..+. ....+.++|.++|++
T Consensus 69 ~m~~--aDlvIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~-~g~~~~~~-----~~~~~~~~L~~~i~~ 140 (167)
T PF04101_consen 69 LMAA--ADLVISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAK-KGAAIMLD-----ESELNPEELAEAIEE 140 (167)
T ss_dssp HHHH--HSEEEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHH-CCCCCCSE-----CCC-SCCCHHHHHHC
T ss_pred HHHH--cCEEEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHH-cCCccccC-----cccCCHHHHHHHHHH
Confidence 9988 889999999999999999999999999988 99999999999 79999987 556779999999999
Q ss_pred HhcCCcc
Q 039436 413 LMASKEG 419 (422)
Q Consensus 413 ~l~~~~~ 419 (422)
++.++..
T Consensus 141 l~~~~~~ 147 (167)
T PF04101_consen 141 LLSDPEK 147 (167)
T ss_dssp HCCCHH-
T ss_pred HHcCcHH
Confidence 9887643
No 37
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.33 E-value=7.1e-10 Score=101.76 Aligned_cols=325 Identities=14% Similarity=0.119 Sum_probs=179.4
Q ss_pred CCccCHHHHHHHHHHHHhC--CCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCCCC
Q 039436 5 PAQGHLNQLLQLSRLVLSY--NIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACKFP 82 (422)
Q Consensus 5 p~~GHv~P~l~La~~L~~~--Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~~~ 82 (422)
.+-||+.-.+.+|.+|.+. |++|++++...-..-+.- ..|+.|+.+| ......++.....+..
T Consensus 20 ~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~-------------~~gVd~V~LP--sl~k~~~G~~~~~d~~ 84 (400)
T COG4671 20 LGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPG-------------PAGVDFVKLP--SLIKGDNGEYGLVDLD 84 (400)
T ss_pred ccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCC-------------cccCceEecC--ceEecCCCceeeeecC
Confidence 4679999999999999997 999999998653322221 1488888885 3221222222222222
Q ss_pred CcchhhHHHhhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHHHHHHHHHHHhcCCCCCCC
Q 039436 83 SHIIPCCEASKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSAFTLYLYIWERMGNPNLNE 162 (422)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (422)
..... ....-.+++-......+||++|+|.+ +.| +-.++ ..+..++. ..+.. .
T Consensus 85 ~~l~e-------~~~~Rs~lil~t~~~fkPDi~IVd~~-P~G--lr~EL-------------~ptL~yl~-~~~t~---~ 137 (400)
T COG4671 85 GDLEE-------TKKLRSQLILSTAETFKPDIFIVDKF-PFG--LRFEL-------------LPTLEYLK-TTGTR---L 137 (400)
T ss_pred CCHHH-------HHHHHHHHHHHHHHhcCCCEEEEecc-ccc--hhhhh-------------hHHHHHHh-hcCCc---c
Confidence 22111 22222333333334458999999954 444 22222 11111110 11100 0
Q ss_pred CCCC-CCCCCCCC--CCCCchhHHHHHHHHHhhhhcCCeEEecC---hhhccHHH--HHHHHHhhhccCCcccccCCCCc
Q 039436 163 ASGL-IPKDVPSL--EGCFTSEFLDSIASEYDHMKFNSGNVYNT---SRVIESAY--MDLLEKATVAETFNHWALGPFNP 234 (422)
Q Consensus 163 ~~~l-~~~~lp~~--~~~~~~~~~~~~~~~~~~~~~~~~~lvnt---~~~le~~~--~~~~~~~~~~~~~~~~~VGPl~~ 234 (422)
-..+ ...+.|.. ..+.+....+.+.+.+ |.+++-. |..++..+ .... ..++.|+|-+..
T Consensus 138 vL~lr~i~D~p~~~~~~w~~~~~~~~I~r~y------D~V~v~GdP~f~d~~~~~~~~~~i-------~~k~~ytG~vq~ 204 (400)
T COG4671 138 VLGLRSIRDIPQELEADWRRAETVRLINRFY------DLVLVYGDPDFYDPLTEFPFAPAI-------RAKMRYTGFVQR 204 (400)
T ss_pred eeehHhhhhchhhhccchhhhHHHHHHHHhh------eEEEEecCccccChhhcCCccHhh-------hhheeEeEEeec
Confidence 0000 01122221 1111222223333322 3444432 22222111 1111 267888998832
Q ss_pred CCCCCCCCCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhh-CCCe--eEEEEecCCCCCccccchhcc
Q 039436 235 VTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQ-SNQK--FIWVLRDADRGDVFNGEVRRA 311 (422)
Q Consensus 235 ~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~-~~~~--~v~~~~~~~~~~~~~~~~~~~ 311 (422)
.-+.... + |... +++.-|.||-|--. ...+.+...++|-.. .+.+ .+.++|+.
T Consensus 205 ~~~~~~~----p-----~~~~-pE~~~Ilvs~GGG~-dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~------------- 260 (400)
T COG4671 205 SLPHLPL----P-----PHEA-PEGFDILVSVGGGA-DGAELIETALAAAQLLAGLNHKWLIVTGPF------------- 260 (400)
T ss_pred cCcCCCC----C-----CcCC-CccceEEEecCCCh-hhHHHHHHHHHHhhhCCCCCcceEEEeCCC-------------
Confidence 1100000 0 1111 33445888776543 234555555555543 3333 44444442
Q ss_pred cCChhhHh-----hccCCCeEEecccch-hhhhhcccccceeecCChhhHHHHHhcCCcEEccCccc---chhhHHHHHH
Q 039436 312 ELPKAYED-----SVKDKGLVVRDWAPQ-LEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHS---DQPRNTLLIT 382 (422)
Q Consensus 312 ~lp~~~~~-----~~~~~~~~~~~~~pq-~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~---Dq~~na~~~~ 382 (422)
+|+.... ..+.+++.+..|-.+ ..++.- ++.+|+-||+||++|-|++|+|.+++|... +|-.-|.|++
T Consensus 261 -MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~g--A~~vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~ 337 (400)
T COG4671 261 -MPEAQRQKLLASAPKRPHISIFEFRNDFESLLAG--ARLVVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLE 337 (400)
T ss_pred -CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHh--hheeeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHH
Confidence 4543322 223468888888654 456666 789999999999999999999999999854 8999999999
Q ss_pred hhcCeEEEEeeccccccccCHHHHHHHHHHHhcCC
Q 039436 383 HLLKLGLVMADWARRDEIVTSNVIENAVKRLMASK 417 (422)
Q Consensus 383 ~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (422)
+ +|+--.+. .+.++++.+++++...+..+
T Consensus 338 ~-LGL~dvL~-----pe~lt~~~La~al~~~l~~P 366 (400)
T COG4671 338 E-LGLVDVLL-----PENLTPQNLADALKAALARP 366 (400)
T ss_pred h-cCcceeeC-----cccCChHHHHHHHHhcccCC
Confidence 8 89998887 56899999999999888744
No 38
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=99.31 E-value=5.2e-14 Score=117.36 Aligned_cols=123 Identities=11% Similarity=0.043 Sum_probs=76.3
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCC
Q 039436 1 MVPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACK 80 (422)
Q Consensus 1 lvp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~ 80 (422)
+.+.|+.||++|++.||++|++|||+|++++++++++.+++. |+.|++++. + ........
T Consensus 3 i~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v~~~--------------Gl~~~~~~~-~-----~~~~~~~~ 62 (139)
T PF03033_consen 3 IATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERVEAA--------------GLEFVPIPG-D-----SRLPRSLE 62 (139)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHHHHT--------------T-EEEESSS-C-----GGGGHHHH
T ss_pred EEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceeccccc--------------CceEEEecC-C-----cCcCcccc
Confidence 467899999999999999999999999999999999999776 999999852 1 00000000
Q ss_pred CCCcchhhHH---HhhhchHHHHHHHHHhc----cCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechHH
Q 039436 81 FPSHIIPCCE---ASKHLRHPLATLLNTLS----ATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVSA 144 (422)
Q Consensus 81 ~~~~~~~~~~---~~~~~~~~~~~~l~~l~----~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~~ 144 (422)
.........+ ........+.+...+.. .....|+++.+.....+..+|+++ |||++.....+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~-~iP~~~~~~~p~ 132 (139)
T PF03033_consen 63 PLANLRRLARLIRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQL-GIPGVANRLFPW 132 (139)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHH-TS-EEEEESSGG
T ss_pred hhhhhhhHHHHhhhhhHHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhh-CchHHHHhhCCc
Confidence 0000000110 11111122222111111 112355788888888899999999 999999877664
No 39
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.31 E-value=5.9e-11 Score=116.04 Aligned_cols=75 Identities=15% Similarity=0.118 Sum_probs=64.4
Q ss_pred hhhhhhcccccceeecCChhhHHHHHhcCCcEEcc----Cccc---------chhhHHHHHHhhcCeEEEEeeccccccc
Q 039436 334 QLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAW----PMHS---------DQPRNTLLITHLLKLGLVMADWARRDEI 400 (422)
Q Consensus 334 q~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~----P~~~---------Dq~~na~~~~~~~g~g~~~~~~~~~~~~ 400 (422)
...++.. ++++|+-+|..|+ |++++|+|+|++ |+.. +|..|+..+++ .++...+. .++
T Consensus 261 ~~~~l~a--ADl~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~-~~~~pel~-----q~~ 331 (385)
T TIGR00215 261 ARKAMFA--ADAALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILAN-RLLVPELL-----QEE 331 (385)
T ss_pred HHHHHHh--CCEEeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcC-Cccchhhc-----CCC
Confidence 3457766 8899999999887 999999999999 8732 27779999988 69998887 668
Q ss_pred cCHHHHHHHHHHHhcCC
Q 039436 401 VTSNVIENAVKRLMASK 417 (422)
Q Consensus 401 ~~~~~l~~av~~~l~~~ 417 (422)
+|++.|.+.+.++|.|+
T Consensus 332 ~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 332 CTPHPLAIALLLLLENG 348 (385)
T ss_pred CCHHHHHHHHHHHhcCC
Confidence 99999999999999987
No 40
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.17 E-value=4.5e-09 Score=102.95 Aligned_cols=135 Identities=17% Similarity=0.321 Sum_probs=94.9
Q ss_pred CCcceEEecCCcccCcHHHHHHHHHHHhhC-CCeeEEEEecCCCCCccccchhcccCChhhHhhcc--CCCeEEecccch
Q 039436 258 KNSVLYVSFGTTTAMSDEQIKELAVGLKQS-NQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVK--DKGLVVRDWAPQ 334 (422)
Q Consensus 258 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~~~~~~pq 334 (422)
+++++++.-|+.... ..+..+++++.+. +.+++++.+.+. .+-+.+.+... ..++.+.+|+++
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~------------~~~~~l~~~~~~~~~~v~~~g~~~~ 266 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNE------------ALKQSLEDLQETNPDALKVFGYVEN 266 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCH------------HHHHHHHHHHhcCCCcEEEEechhh
Confidence 345677777877532 2355677777654 467776665431 01112222111 247888899986
Q ss_pred h-hhhhcccccceeecCChhhHHHHHhcCCcEEcc-CcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHH
Q 039436 335 L-EILAHCSTGGFMSHCGWNSCMESITMGVPIVAW-PMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKR 412 (422)
Q Consensus 335 ~-~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~-P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~ 412 (422)
. .++.. ++++|+..|..|+.||+++|+|+|+. |..+.|..|+..+.+ .|.|+... +.+++.+++++
T Consensus 267 ~~~l~~~--aD~~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~-~G~~~~~~---------~~~~l~~~i~~ 334 (380)
T PRK13609 267 IDELFRV--TSCMITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER-KGAAVVIR---------DDEEVFAKTEA 334 (380)
T ss_pred HHHHHHh--ccEEEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh-CCcEEEEC---------CHHHHHHHHHH
Confidence 4 68877 77999999988999999999999985 666677889988887 69987653 57899999999
Q ss_pred HhcCCc
Q 039436 413 LMASKE 418 (422)
Q Consensus 413 ~l~~~~ 418 (422)
+++|++
T Consensus 335 ll~~~~ 340 (380)
T PRK13609 335 LLQDDM 340 (380)
T ss_pred HHCCHH
Confidence 998764
No 41
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.95 E-value=7.3e-08 Score=94.49 Aligned_cols=139 Identities=17% Similarity=0.114 Sum_probs=87.0
Q ss_pred CcceEEecCCcccCcHHHHHHHHHHHhhC----CCeeEEEEecCCCCCccccchhcccCChhhHh--------------h
Q 039436 259 NSVLYVSFGTTTAMSDEQIKELAVGLKQS----NQKFIWVLRDADRGDVFNGEVRRAELPKAYED--------------S 320 (422)
Q Consensus 259 ~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~----~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~--------------~ 320 (422)
.++|.+--||...--...+..++++++.. +..|++.+.+.... ..+-..+.+ .
T Consensus 205 ~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~---------~~~~~~l~~~g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 205 RFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSL---------EKLQAILEDLGWQLEGSSEDQTSL 275 (396)
T ss_pred CCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCH---------HHHHHHHHhcCceecCCccccchh
Confidence 45788888998543333334444444432 56788877443210 000000000 0
Q ss_pred ccCCCeEEeccc-chhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhc----CeEEEEeecc
Q 039436 321 VKDKGLVVRDWA-PQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLL----KLGLVMADWA 395 (422)
Q Consensus 321 ~~~~~~~~~~~~-pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~----g~g~~~~~~~ 395 (422)
...+++.+..+. .-..++.. ++++|+-.|..| .|++..|+|+|.+|.-..|. |+...++ . |.++.+.
T Consensus 276 ~~~~~~~v~~~~~~~~~~l~~--ADlvI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~-~~~l~g~~~~l~--- 347 (396)
T TIGR03492 276 FQKGTLEVLLGRGAFAEILHW--ADLGIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEA-QSRLLGGSVFLA--- 347 (396)
T ss_pred hccCceEEEechHhHHHHHHh--CCEEEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHh-hHhhcCCEEecC---
Confidence 111234444443 34567766 889999999766 99999999999999766665 9876654 3 6666665
Q ss_pred ccccccCHHHHHHHHHHHhcCCc
Q 039436 396 RRDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~~~~ 418 (422)
..+.+.+.+++.+++.|++
T Consensus 348 ----~~~~~~l~~~l~~ll~d~~ 366 (396)
T TIGR03492 348 ----SKNPEQAAQVVRQLLADPE 366 (396)
T ss_pred ----CCCHHHHHHHHHHHHcCHH
Confidence 3455999999999998764
No 42
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.91 E-value=2.4e-08 Score=97.77 Aligned_cols=76 Identities=20% Similarity=0.137 Sum_probs=52.3
Q ss_pred hhhhhcccccceeecCChhhHHHHHhcCCcEEccCccc------c--hhhH-----HHHHHhhcCeEEEEeecccccccc
Q 039436 335 LEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHS------D--QPRN-----TLLITHLLKLGLVMADWARRDEIV 401 (422)
Q Consensus 335 ~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~------D--q~~n-----a~~~~~~~g~g~~~~~~~~~~~~~ 401 (422)
..+++. ++++|+.+|.+++ |++++|+|+|+.|-.. + |..| +..+++ .+++..+. ....
T Consensus 256 ~~~~~~--aDl~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~-----~~~~ 326 (380)
T PRK00025 256 REAMAA--ADAALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAG-RELVPELL-----QEEA 326 (380)
T ss_pred HHHHHh--CCEEEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcC-CCcchhhc-----CCCC
Confidence 456666 8899999998887 9999999999985432 1 1111 122322 23333343 3467
Q ss_pred CHHHHHHHHHHHhcCCcc
Q 039436 402 TSNVIENAVKRLMASKEG 419 (422)
Q Consensus 402 ~~~~l~~av~~~l~~~~~ 419 (422)
+++++.+++.++++|++.
T Consensus 327 ~~~~l~~~i~~ll~~~~~ 344 (380)
T PRK00025 327 TPEKLARALLPLLADGAR 344 (380)
T ss_pred CHHHHHHHHHHHhcCHHH
Confidence 899999999999998754
No 43
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.86 E-value=1.9e-06 Score=82.87 Aligned_cols=130 Identities=16% Similarity=0.185 Sum_probs=84.4
Q ss_pred cceEEecCCccc-CcHHHHHHHHHHHhhC-CCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhh-
Q 039436 260 SVLYVSFGTTTA-MSDEQIKELAVGLKQS-NQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLE- 336 (422)
Q Consensus 260 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~- 336 (422)
..+++..|+... ...+.+.+++..+.+. +..+++ +|.... . +.+. ....++.+.+|+++..
T Consensus 197 ~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i-~G~~~~---------~----~~~~--~~~~~v~~~g~~~~~~~ 260 (364)
T cd03814 197 RPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVI-VGDGPA---------R----ARLE--ARYPNVHFLGFLDGEEL 260 (364)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEE-EeCCch---------H----HHHh--ccCCcEEEEeccCHHHH
Confidence 346677777643 3344555555555432 344443 443220 0 1111 2244788889998776
Q ss_pred --hhhcccccceeecCC----hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHH
Q 039436 337 --ILAHCSTGGFMSHCG----WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAV 410 (422)
Q Consensus 337 --il~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av 410 (422)
++.. ++++|+.+. .++++||+++|+|+|+.+..+ +...+.+ -+.|.... .-+.+++.+++
T Consensus 261 ~~~~~~--~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~-~~~g~~~~-------~~~~~~l~~~i 326 (364)
T cd03814 261 AAAYAS--ADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTD-GENGLLVE-------PGDAEAFAAAL 326 (364)
T ss_pred HHHHHh--CCEEEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcC-CcceEEcC-------CCCHHHHHHHH
Confidence 5666 778887765 478999999999999887554 4555655 58888776 34778899999
Q ss_pred HHHhcCCcc
Q 039436 411 KRLMASKEG 419 (422)
Q Consensus 411 ~~~l~~~~~ 419 (422)
.+++.|++.
T Consensus 327 ~~l~~~~~~ 335 (364)
T cd03814 327 AALLADPEL 335 (364)
T ss_pred HHHHcCHHH
Confidence 999987653
No 44
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.83 E-value=2.7e-06 Score=83.35 Aligned_cols=82 Identities=13% Similarity=0.206 Sum_probs=61.4
Q ss_pred CCCeEEecccchhhh---hhcccccceeecCC----hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecc
Q 039436 323 DKGLVVRDWAPQLEI---LAHCSTGGFMSHCG----WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWA 395 (422)
Q Consensus 323 ~~~~~~~~~~pq~~i---l~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~ 395 (422)
..++.+.+|+|+.++ +.. ++++++..- -.+++||+++|+|+|+-...+ +...+.+ -+.|...+
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~--adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~-~~~g~~~~--- 351 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRA--ADVFVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVD-GVTGLLVD--- 351 (398)
T ss_pred CceEEEeccCCHHHHHHHHHh--CCEEEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccC-CCCeEEeC---
Confidence 347888999998765 666 778885432 358999999999999876443 4455655 47888876
Q ss_pred ccccccCHHHHHHHHHHHhcCCc
Q 039436 396 RRDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~~~~ 418 (422)
.-+.+++.++|.+++++++
T Consensus 352 ----~~~~~~l~~~i~~l~~~~~ 370 (398)
T cd03800 352 ----PRDPEALAAALRRLLTDPA 370 (398)
T ss_pred ----CCCHHHHHHHHHHHHhCHH
Confidence 2368999999999998753
No 45
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=98.80 E-value=3.5e-07 Score=89.64 Aligned_cols=81 Identities=16% Similarity=0.223 Sum_probs=67.5
Q ss_pred CCeEEecccch-hhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchh-hHHHHHHhhcCeEEEEeecccccccc
Q 039436 324 KGLVVRDWAPQ-LEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQP-RNTLLITHLLKLGLVMADWARRDEIV 401 (422)
Q Consensus 324 ~~~~~~~~~pq-~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~-~na~~~~~~~g~g~~~~~~~~~~~~~ 401 (422)
.++.+.+|+++ ..++.. ++++|+.+|.+|++||+++|+|+|+.+....|. .|+..+.+ .|.|+.+.
T Consensus 265 ~~v~~~G~~~~~~~l~~a--aDv~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~-~g~g~~~~--------- 332 (382)
T PLN02605 265 IPVKVRGFVTNMEEWMGA--CDCIITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVD-NGFGAFSE--------- 332 (382)
T ss_pred CCeEEEeccccHHHHHHh--CCEEEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHh-CCceeecC---------
Confidence 36778899874 345555 889999999999999999999999999877775 79998887 69997553
Q ss_pred CHHHHHHHHHHHhcC
Q 039436 402 TSNVIENAVKRLMAS 416 (422)
Q Consensus 402 ~~~~l~~av~~~l~~ 416 (422)
+++++.+++++++.|
T Consensus 333 ~~~~la~~i~~ll~~ 347 (382)
T PLN02605 333 SPKEIARIVAEWFGD 347 (382)
T ss_pred CHHHHHHHHHHHHcC
Confidence 789999999999986
No 46
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.78 E-value=9.5e-06 Score=79.90 Aligned_cols=82 Identities=16% Similarity=0.119 Sum_probs=58.5
Q ss_pred CCCeEEecccchhhh---hhcccccceee---cCCh-hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecc
Q 039436 323 DKGLVVRDWAPQLEI---LAHCSTGGFMS---HCGW-NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWA 395 (422)
Q Consensus 323 ~~~~~~~~~~pq~~i---l~~~~~~~~i~---HgG~-~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~ 395 (422)
..++.+.+++|+..+ +.. ++++|. +.|. ++++||+++|+|+|+... ......+.+ -..|..++
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~--adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i~~-~~~G~lv~--- 349 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQV--SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVITD-GENGLLVD--- 349 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHh--CcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhccc-CCceEEcC---
Confidence 457888899998764 445 556663 2232 489999999999998643 344555554 35677665
Q ss_pred ccccccCHHHHHHHHHHHhcCCc
Q 039436 396 RRDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~~~~ 418 (422)
.-+.+++.+++.++++|++
T Consensus 350 ----~~d~~~la~~i~~ll~~~~ 368 (396)
T cd03818 350 ----FFDPDALAAAVIELLDDPA 368 (396)
T ss_pred ----CCCHHHHHHHHHHHHhCHH
Confidence 3479999999999998764
No 47
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.68 E-value=1.5e-05 Score=80.19 Aligned_cols=131 Identities=18% Similarity=0.158 Sum_probs=81.4
Q ss_pred ceEEecCCcccCcHHHHHHHHHHHhhC-CCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhhhh
Q 039436 261 VLYVSFGTTTAMSDEQIKELAVGLKQS-NQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILA 339 (422)
Q Consensus 261 vv~vs~Gs~~~~~~~~~~~~~~~l~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~ 339 (422)
.+++..|++.. ...+..++++++.. +.++++ +|.+. .-+.+.+.....++.+.+++++.++..
T Consensus 264 ~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~i-vG~G~-------------~~~~l~~~~~~~~V~f~G~v~~~ev~~ 327 (465)
T PLN02871 264 PLIVYVGRLGA--EKNLDFLKRVMERLPGARLAF-VGDGP-------------YREELEKMFAGTPTVFTGMLQGDELSQ 327 (465)
T ss_pred eEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEE-EeCCh-------------HHHHHHHHhccCCeEEeccCCHHHHHH
Confidence 34555677643 23455567777665 455554 44322 113344444455788889998766333
Q ss_pred -cccccceeecCC----hhhHHHHHhcCCcEEccCcccchhhHHHHHHh--hcCeEEEEeeccccccccCHHHHHHHHHH
Q 039436 340 -HCSTGGFMSHCG----WNSCMESITMGVPIVAWPMHSDQPRNTLLITH--LLKLGLVMADWARRDEIVTSNVIENAVKR 412 (422)
Q Consensus 340 -~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~--~~g~g~~~~~~~~~~~~~~~~~l~~av~~ 412 (422)
..++++||.-.. -++++||+++|+|+|+....+ ....+.+ .-+.|..++ .-+.+++.+++.+
T Consensus 328 ~~~~aDv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv~-------~~d~~~la~~i~~ 396 (465)
T PLN02871 328 AYASGDVFVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLYT-------PGDVDDCVEKLET 396 (465)
T ss_pred HHHHCCEEEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEeC-------CCCHHHHHHHHHH
Confidence 233778886543 346899999999999876432 2223322 136787775 2378999999999
Q ss_pred HhcCCc
Q 039436 413 LMASKE 418 (422)
Q Consensus 413 ~l~~~~ 418 (422)
+++|++
T Consensus 397 ll~~~~ 402 (465)
T PLN02871 397 LLADPE 402 (465)
T ss_pred HHhCHH
Confidence 998764
No 48
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.60 E-value=4e-05 Score=73.40 Aligned_cols=133 Identities=17% Similarity=0.164 Sum_probs=81.3
Q ss_pred CcceEEecCCccc-CcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhh
Q 039436 259 NSVLYVSFGTTTA-MSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEI 337 (422)
Q Consensus 259 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~i 337 (422)
...+++..|++.. ...+.+.+++.-+...+.+++++ |...... ..........++.+.+|+++..+
T Consensus 190 ~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~-G~~~~~~------------~~~~~~~~~~~v~~~g~~~~~~~ 256 (359)
T cd03823 190 GRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIV-GNGLELE------------EESYELEGDPRVEFLGAYPQEEI 256 (359)
T ss_pred CceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEE-cCchhhh------------HHHHhhcCCCeEEEeCCCCHHHH
Confidence 4456777888743 23344444444444334565543 4332100 00000022347888899986665
Q ss_pred ---hhcccccceeec----CCh-hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHH
Q 039436 338 ---LAHCSTGGFMSH----CGW-NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENA 409 (422)
Q Consensus 338 ---l~~~~~~~~i~H----gG~-~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~a 409 (422)
+.. ++++|.. .|+ .+++||+++|+|+|+.+.. .+...+.+ -+.|..+. .-+.+++.++
T Consensus 257 ~~~~~~--ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~-~~~g~~~~-------~~d~~~l~~~ 322 (359)
T cd03823 257 DDFYAE--IDVLVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRD-GVNGLLFP-------PGDAEDLAAA 322 (359)
T ss_pred HHHHHh--CCEEEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcC-CCcEEEEC-------CCCHHHHHHH
Confidence 655 6677742 333 4799999999999987643 35556655 45788776 2358999999
Q ss_pred HHHHhcCCc
Q 039436 410 VKRLMASKE 418 (422)
Q Consensus 410 v~~~l~~~~ 418 (422)
++++++|++
T Consensus 323 i~~l~~~~~ 331 (359)
T cd03823 323 LERLIDDPD 331 (359)
T ss_pred HHHHHhChH
Confidence 999998764
No 49
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.59 E-value=1.6e-05 Score=76.89 Aligned_cols=132 Identities=16% Similarity=0.179 Sum_probs=81.9
Q ss_pred CcceEEecCCccc-CcHHHHHHHHHHHhhC-CCeeEEEEecCCCCCccccchhcccCChhhH---hhccCCCeEEecccc
Q 039436 259 NSVLYVSFGTTTA-MSDEQIKELAVGLKQS-NQKFIWVLRDADRGDVFNGEVRRAELPKAYE---DSVKDKGLVVRDWAP 333 (422)
Q Consensus 259 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~---~~~~~~~~~~~~~~p 333 (422)
++.+++..|+... ...+.+.+++..+.+. +.++++ +|.+. ..+.+. .....+++.+.++++
T Consensus 219 ~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~~-------------~~~~~~~~~~~~~~~~v~~~g~~~ 284 (394)
T cd03794 219 DKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDGP-------------EKEELKELAKALGLDNVTFLGRVP 284 (394)
T ss_pred CcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCcc-------------cHHHHHHHHHHcCCCcEEEeCCCC
Confidence 4557777888753 3344555555555443 445443 33322 011222 123345788889998
Q ss_pred hhh---hhhcccccceeecCC---------hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecccccccc
Q 039436 334 QLE---ILAHCSTGGFMSHCG---------WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIV 401 (422)
Q Consensus 334 q~~---il~~~~~~~~i~HgG---------~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~ 401 (422)
+.. ++.. ++++|.... -++++||+++|+|+|+.+..+.+.. +.+ .+.|..++ .-
T Consensus 285 ~~~~~~~~~~--~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~~~-~~~g~~~~-------~~ 350 (394)
T cd03794 285 KEELPELLAA--ADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----VEE-AGAGLVVP-------PG 350 (394)
T ss_pred hHHHHHHHHh--hCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----hcc-CCcceEeC-------CC
Confidence 776 4555 667775433 2347999999999999987665433 323 36777775 23
Q ss_pred CHHHHHHHHHHHhcCCc
Q 039436 402 TSNVIENAVKRLMASKE 418 (422)
Q Consensus 402 ~~~~l~~av~~~l~~~~ 418 (422)
+.+++.+++.++++|++
T Consensus 351 ~~~~l~~~i~~~~~~~~ 367 (394)
T cd03794 351 DPEALAAAILELLDDPE 367 (394)
T ss_pred CHHHHHHHHHHHHhChH
Confidence 78999999999997754
No 50
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=98.57 E-value=4.9e-07 Score=88.84 Aligned_cols=135 Identities=13% Similarity=0.271 Sum_probs=94.2
Q ss_pred CCcceEEecCCcccCcHHHHHHHHHHH-hh-CCCeeEEEEecCCCCCccccchhcccCChhhHhhc-cCCCeEEecccch
Q 039436 258 KNSVLYVSFGTTTAMSDEQIKELAVGL-KQ-SNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSV-KDKGLVVRDWAPQ 334 (422)
Q Consensus 258 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l-~~-~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~~~~~~~pq 334 (422)
++++|+++.|++.. ...+..+++++ +. .+.+++++++.+. .+-+.+.+.. ...++.+.+|+.+
T Consensus 201 ~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~------------~l~~~l~~~~~~~~~v~~~G~~~~ 266 (391)
T PRK13608 201 DKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSK------------ELKRSLTAKFKSNENVLILGYTKH 266 (391)
T ss_pred CCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCH------------HHHHHHHHHhccCCCeEEEeccch
Confidence 35678888898863 13455555553 32 2456766665432 0111222222 1346788899854
Q ss_pred h-hhhhcccccceeecCChhhHHHHHhcCCcEEcc-CcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHH
Q 039436 335 L-EILAHCSTGGFMSHCGWNSCMESITMGVPIVAW-PMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKR 412 (422)
Q Consensus 335 ~-~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~-P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~ 412 (422)
. .++.. ++++|+..|..|+.||+++|+|+|+. |.-+.|..|+..+.+ .|+|+... +.+++.++|.+
T Consensus 267 ~~~~~~~--aDl~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~-~G~g~~~~---------~~~~l~~~i~~ 334 (391)
T PRK13608 267 MNEWMAS--SQLMITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEE-KGFGKIAD---------TPEEAIKIVAS 334 (391)
T ss_pred HHHHHHh--hhEEEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHh-CCcEEEeC---------CHHHHHHHHHH
Confidence 3 56766 88999998889999999999999998 665667899999998 79998764 68889999999
Q ss_pred HhcCCc
Q 039436 413 LMASKE 418 (422)
Q Consensus 413 ~l~~~~ 418 (422)
+++|++
T Consensus 335 ll~~~~ 340 (391)
T PRK13608 335 LTNGNE 340 (391)
T ss_pred HhcCHH
Confidence 988754
No 51
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.53 E-value=2.5e-06 Score=82.89 Aligned_cols=136 Identities=13% Similarity=0.159 Sum_probs=84.7
Q ss_pred CCcceEEecCCcccC-cHHHHHHHHHHHhhCCCe-eEEEEecCCCCCccccchhcccCChhhHh---hcc--CCCeEEec
Q 039436 258 KNSVLYVSFGTTTAM-SDEQIKELAVGLKQSNQK-FIWVLRDADRGDVFNGEVRRAELPKAYED---SVK--DKGLVVRD 330 (422)
Q Consensus 258 ~~~vv~vs~Gs~~~~-~~~~~~~~~~~l~~~~~~-~v~~~~~~~~~~~~~~~~~~~~lp~~~~~---~~~--~~~~~~~~ 330 (422)
+++++++++|..... ..+.+..++++++....+ +++++...... -+.+.+ +.. ..++.+.+
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~------------~~~l~~~~~~~~~~~~~v~~~~ 264 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPRT------------RPRIREAGLEFLGHHPNVLLIS 264 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCCh------------HHHHHHHHHhhccCCCCEEEEC
Confidence 345678888877644 455677788888765432 44444332210 012221 111 35777776
Q ss_pred ccchhhhhh-cccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHH
Q 039436 331 WAPQLEILA-HCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENA 409 (422)
Q Consensus 331 ~~pq~~il~-~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~a 409 (422)
..++..+.. ..++++||+..| |.+.||+++|+|+|+++.. |. +..+.+ .|++..+. -+.+++.++
T Consensus 265 ~~~~~~~~~l~~~ad~~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~-~g~~~~~~--------~~~~~i~~~ 330 (363)
T cd03786 265 PLGYLYFLLLLKNADLVLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVE-SGTNVLVG--------TDPEAILAA 330 (363)
T ss_pred CcCHHHHHHHHHcCcEEEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhh-eeeEEecC--------CCHHHHHHH
Confidence 665554322 233889999999 7888999999999998643 22 334444 47665553 158999999
Q ss_pred HHHHhcCCcc
Q 039436 410 VKRLMASKEG 419 (422)
Q Consensus 410 v~~~l~~~~~ 419 (422)
++++++++..
T Consensus 331 i~~ll~~~~~ 340 (363)
T cd03786 331 IEKLLSDEFA 340 (363)
T ss_pred HHHHhcCchh
Confidence 9999997643
No 52
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.47 E-value=9.1e-06 Score=72.97 Aligned_cols=131 Identities=12% Similarity=0.168 Sum_probs=89.7
Q ss_pred eEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhcc-CCCeEEecccc-hhhhhh
Q 039436 262 LYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVK-DKGLVVRDWAP-QLEILA 339 (422)
Q Consensus 262 v~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~~~~~~p-q~~il~ 339 (422)
|+|++|-.. +....-+++..|.+..+.+-.+++... +-+..+..+.. .+++...-... -..+..
T Consensus 161 ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~~------------p~l~~l~k~~~~~~~i~~~~~~~dma~LMk 226 (318)
T COG3980 161 ILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSSN------------PTLKNLRKRAEKYPNINLYIDTNDMAELMK 226 (318)
T ss_pred EEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCCC------------cchhHHHHHHhhCCCeeeEecchhHHHHHH
Confidence 999998643 334566688888887766556665321 22233433332 34554433332 445777
Q ss_pred cccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcC
Q 039436 340 HCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMAS 416 (422)
Q Consensus 340 ~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~ 416 (422)
. +++.|+-+|. |++|++.-|+|.+++|+.-.|--.|...+. +|+-..+. -. ++.+....-+.+++.|
T Consensus 227 e--~d~aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~-lg~~~~l~-----~~-l~~~~~~~~~~~i~~d 293 (318)
T COG3980 227 E--ADLAISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEA-LGIIKQLG-----YH-LKDLAKDYEILQIQKD 293 (318)
T ss_pred h--cchheeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHh-cCchhhcc-----CC-CchHHHHHHHHHhhhC
Confidence 7 7799998875 899999999999999999999999999988 79887774 22 5566666666666655
No 53
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.47 E-value=4.3e-05 Score=73.53 Aligned_cols=130 Identities=15% Similarity=0.222 Sum_probs=79.7
Q ss_pred cceEEecCCccc-CcHHHHHHHHHHHhh--CCCeeEEEEecCCCCCccccchhcccCChhhHhh---c-cCCCeEEeccc
Q 039436 260 SVLYVSFGTTTA-MSDEQIKELAVGLKQ--SNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDS---V-KDKGLVVRDWA 332 (422)
Q Consensus 260 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~---~-~~~~~~~~~~~ 332 (422)
..+++..|++.. ...+.+.+++..+.+ .+.++++.-++.. -+.+.+. . ...++.+.+++
T Consensus 202 ~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~--------------~~~~~~~~~~~~~~~~v~~~g~~ 267 (374)
T cd03817 202 EPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPE--------------REELEELARELGLADRVIFTGFV 267 (374)
T ss_pred CeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCch--------------HHHHHHHHHHcCCCCcEEEeccC
Confidence 446667787643 344555565555554 2345544322211 0112111 1 23478888999
Q ss_pred chhh---hhhcccccceeecCC----hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHH
Q 039436 333 PQLE---ILAHCSTGGFMSHCG----WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNV 405 (422)
Q Consensus 333 pq~~---il~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~ 405 (422)
|+.. ++.+ ++++|..+. -++++||+++|+|+|+... ...+..+.+ -+.|..++. . +. +
T Consensus 268 ~~~~~~~~~~~--ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i~~-~~~g~~~~~-----~--~~-~ 332 (374)
T cd03817 268 PREELPDYYKA--ADLFVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLVAD-GENGFLFPP-----G--DE-A 332 (374)
T ss_pred ChHHHHHHHHH--cCEEEecccccCcChHHHHHHHcCCcEEEeCC----CChhhheec-CceeEEeCC-----C--CH-H
Confidence 9876 4656 667775443 4689999999999998754 334555555 477887762 1 22 8
Q ss_pred HHHHHHHHhcCCc
Q 039436 406 IENAVKRLMASKE 418 (422)
Q Consensus 406 l~~av~~~l~~~~ 418 (422)
+.+++.+++++++
T Consensus 333 ~~~~i~~l~~~~~ 345 (374)
T cd03817 333 LAEALLRLLQDPE 345 (374)
T ss_pred HHHHHHHHHhChH
Confidence 9999999998765
No 54
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.39 E-value=0.00019 Score=68.31 Aligned_cols=136 Identities=16% Similarity=0.194 Sum_probs=80.3
Q ss_pred CcceEEecCCccc-CcHHHHHHHHHHHhhC--CCeeEEEEecCCCCCccccchhcccCChh-hHhhccCCCeEEecccc-
Q 039436 259 NSVLYVSFGTTTA-MSDEQIKELAVGLKQS--NQKFIWVLRDADRGDVFNGEVRRAELPKA-YEDSVKDKGLVVRDWAP- 333 (422)
Q Consensus 259 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~v~~~~~~~~~~~~~~~~~~~~lp~~-~~~~~~~~~~~~~~~~p- 333 (422)
+..+++..|+... ...+.+.+++..+.+. +.++++ ++...... ..-.. ........++.+.++..
T Consensus 187 ~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i-~G~~~~~~---------~~~~~~~~~~~~~~~v~~~g~~~~ 256 (359)
T cd03808 187 DDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLL-VGDGDEEN---------PAAILEIEKLGLEGRVEFLGFRDD 256 (359)
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEE-EcCCCcch---------hhHHHHHHhcCCcceEEEeecccc
Confidence 4567888888743 3445555555555532 345444 33332110 00000 11112234677767633
Q ss_pred hhhhhhcccccceeecCC----hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHH
Q 039436 334 QLEILAHCSTGGFMSHCG----WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENA 409 (422)
Q Consensus 334 q~~il~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~a 409 (422)
-..++.. ++++|.-.. -++++||+++|+|+|+-...+ +...+.+ -+.|..++ .-+.+++.++
T Consensus 257 ~~~~~~~--adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~-~~~g~~~~-------~~~~~~~~~~ 322 (359)
T cd03808 257 VPELLAA--ADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVID-GVNGFLVP-------PGDAEALADA 322 (359)
T ss_pred HHHHHHh--ccEEEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhc-CcceEEEC-------CCCHHHHHHH
Confidence 3345666 667776543 578999999999999865433 3445554 46787775 3378999999
Q ss_pred HHHHhcCCc
Q 039436 410 VKRLMASKE 418 (422)
Q Consensus 410 v~~~l~~~~ 418 (422)
+.+++.|++
T Consensus 323 i~~l~~~~~ 331 (359)
T cd03808 323 IERLIEDPE 331 (359)
T ss_pred HHHHHhCHH
Confidence 999888764
No 55
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.37 E-value=0.00026 Score=67.50 Aligned_cols=83 Identities=17% Similarity=0.225 Sum_probs=61.1
Q ss_pred CCCeEEecccchhh---hhhcccccceee----cCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecc
Q 039436 323 DKGLVVRDWAPQLE---ILAHCSTGGFMS----HCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWA 395 (422)
Q Consensus 323 ~~~~~~~~~~pq~~---il~~~~~~~~i~----HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~ 395 (422)
..++.+.+++++.+ ++.. ++++|. -|.-++++||+++|+|+|+... ..+...+.+ -+.|...+
T Consensus 255 ~~~v~~~g~~~~~~~~~~~~~--~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~-~~~g~~~~--- 324 (374)
T cd03801 255 GDRVTFLGFVPDEDLPALYAA--ADVFVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVED-GETGLLVP--- 324 (374)
T ss_pred CcceEEEeccChhhHHHHHHh--cCEEEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcC-CcceEEeC---
Confidence 45788889998665 4555 667774 2456789999999999998765 345556654 47787776
Q ss_pred ccccccCHHHHHHHHHHHhcCCcc
Q 039436 396 RRDEIVTSNVIENAVKRLMASKEG 419 (422)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~~~~~ 419 (422)
.-+.+++.+++.+++++++.
T Consensus 325 ----~~~~~~l~~~i~~~~~~~~~ 344 (374)
T cd03801 325 ----PGDPEALAEAILRLLDDPEL 344 (374)
T ss_pred ----CCCHHHHHHHHHHHHcChHH
Confidence 34589999999999987653
No 56
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.35 E-value=0.00021 Score=67.79 Aligned_cols=81 Identities=17% Similarity=0.245 Sum_probs=55.6
Q ss_pred CeEEeccc-chhhhhhcccccceeecCC----hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcC-eEEEEeeccccc
Q 039436 325 GLVVRDWA-PQLEILAHCSTGGFMSHCG----WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLK-LGLVMADWARRD 398 (422)
Q Consensus 325 ~~~~~~~~-pq~~il~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g-~g~~~~~~~~~~ 398 (422)
++.+.++. .-..++.. ++++|.-.. -++++||+++|+|+|+.+....+. .+.+ -+ .|..++
T Consensus 236 ~v~~~g~~~~~~~~~~~--ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~-~~~~g~~~~------ 302 (348)
T cd03820 236 RVILLGFTKNIEEYYAK--ASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIE-DGVNGLLVP------ 302 (348)
T ss_pred eEEEcCCcchHHHHHHh--CCEEEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhc-cCcceEEeC------
Confidence 56666652 23446666 667776642 468999999999999876544332 2333 24 787776
Q ss_pred cccCHHHHHHHHHHHhcCCcc
Q 039436 399 EIVTSNVIENAVKRLMASKEG 419 (422)
Q Consensus 399 ~~~~~~~l~~av~~~l~~~~~ 419 (422)
.-+.+++.+++.++++|++.
T Consensus 303 -~~~~~~~~~~i~~ll~~~~~ 322 (348)
T cd03820 303 -NGDVEALAEALLRLMEDEEL 322 (348)
T ss_pred -CCCHHHHHHHHHHHHcCHHH
Confidence 34689999999999988753
No 57
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.34 E-value=7.9e-05 Score=74.13 Aligned_cols=71 Identities=14% Similarity=0.161 Sum_probs=53.4
Q ss_pred hhhhcccccceeec-----CChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHH
Q 039436 336 EILAHCSTGGFMSH-----CGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAV 410 (422)
Q Consensus 336 ~il~~~~~~~~i~H-----gG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av 410 (422)
.+++. +++++.. +|..+++||+++|+|+|+-|...++......+.+ .|.++... +.+++.+++
T Consensus 315 ~~y~~--aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~-~g~~~~~~---------d~~~La~~l 382 (425)
T PRK05749 315 LLYAI--ADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQ-AGAAIQVE---------DAEDLAKAV 382 (425)
T ss_pred HHHHh--CCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHH-CCCeEEEC---------CHHHHHHHH
Confidence 34555 6663331 3444699999999999999998888888877766 57776654 678999999
Q ss_pred HHHhcCCc
Q 039436 411 KRLMASKE 418 (422)
Q Consensus 411 ~~~l~~~~ 418 (422)
.++++|++
T Consensus 383 ~~ll~~~~ 390 (425)
T PRK05749 383 TYLLTDPD 390 (425)
T ss_pred HHHhcCHH
Confidence 99998764
No 58
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.33 E-value=0.00032 Score=69.16 Aligned_cols=81 Identities=16% Similarity=0.161 Sum_probs=58.2
Q ss_pred CCeEEecccchhh---hhhcccccceee---cCCh-hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccc
Q 039436 324 KGLVVRDWAPQLE---ILAHCSTGGFMS---HCGW-NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWAR 396 (422)
Q Consensus 324 ~~~~~~~~~pq~~---il~~~~~~~~i~---HgG~-~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~ 396 (422)
.++.+.+++++.. ++.. +++||. +-|+ .+++||+++|+|+|+....+ ....+.+ -+.|..++
T Consensus 283 ~~v~~~g~~~~~~~~~~l~~--ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~-~~~g~~~~---- 351 (405)
T TIGR03449 283 DRVRFLPPRPPEELVHVYRA--ADVVAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVAD-GETGLLVD---- 351 (405)
T ss_pred ceEEECCCCCHHHHHHHHHh--CCEEEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhcc-CCceEECC----
Confidence 4788889998754 5666 677774 2333 58999999999999975432 3344544 46777765
Q ss_pred cccccCHHHHHHHHHHHhcCCc
Q 039436 397 RDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 397 ~~~~~~~~~l~~av~~~l~~~~ 418 (422)
.-+.+++++++.+++++++
T Consensus 352 ---~~d~~~la~~i~~~l~~~~ 370 (405)
T TIGR03449 352 ---GHDPADWADALARLLDDPR 370 (405)
T ss_pred ---CCCHHHHHHHHHHHHhCHH
Confidence 3478999999999998754
No 59
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.30 E-value=0.00033 Score=70.00 Aligned_cols=82 Identities=17% Similarity=0.230 Sum_probs=57.6
Q ss_pred CeEEecccchhhh---hhcc--cccceeecC---C-hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecc
Q 039436 325 GLVVRDWAPQLEI---LAHC--STGGFMSHC---G-WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWA 395 (422)
Q Consensus 325 ~~~~~~~~pq~~i---l~~~--~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~ 395 (422)
++.+.+++++.++ +... ++++||... | -.+++||+++|+|+|+.-.. -+...+.+ -..|..++
T Consensus 318 ~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g~~eiv~~-~~~G~lv~--- 389 (439)
T TIGR02472 318 KVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDG----GPRDIIAN-CRNGLLVD--- 389 (439)
T ss_pred eEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCC----CcHHHhcC-CCcEEEeC---
Confidence 5677788887665 4432 237888653 3 35899999999999988553 24444544 35687775
Q ss_pred ccccccCHHHHHHHHHHHhcCCc
Q 039436 396 RRDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~~~~ 418 (422)
.-+.+++.+++.++++|++
T Consensus 390 ----~~d~~~la~~i~~ll~~~~ 408 (439)
T TIGR02472 390 ----VLDLEAIASALEDALSDSS 408 (439)
T ss_pred ----CCCHHHHHHHHHHHHhCHH
Confidence 3478999999999998764
No 60
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.30 E-value=0.001 Score=65.13 Aligned_cols=80 Identities=11% Similarity=0.132 Sum_probs=56.9
Q ss_pred CCeEEecccchhh---hhhcccccceeecC---C-hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccc
Q 039436 324 KGLVVRDWAPQLE---ILAHCSTGGFMSHC---G-WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWAR 396 (422)
Q Consensus 324 ~~~~~~~~~pq~~---il~~~~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~ 396 (422)
.++.+.+++|+.. ++.. +++++... | -.+++||+++|+|+|+.-..+ ....+.+ -+.|....
T Consensus 280 ~~V~f~g~~~~~~~~~~l~~--ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~-~~~g~~~~---- 348 (392)
T cd03805 280 DQVIFLPSISDSQKELLLSS--ARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVD-GETGFLCE---- 348 (392)
T ss_pred ceEEEeCCCChHHHHHHHhh--CeEEEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhcc-CCceEEeC----
Confidence 5788999999875 4555 66777432 2 257899999999999974432 3344544 35676664
Q ss_pred cccccCHHHHHHHHHHHhcCCc
Q 039436 397 RDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 397 ~~~~~~~~~l~~av~~~l~~~~ 418 (422)
. +.+++.+++.+++++++
T Consensus 349 ---~-~~~~~a~~i~~l~~~~~ 366 (392)
T cd03805 349 ---P-TPEEFAEAMLKLANDPD 366 (392)
T ss_pred ---C-CHHHHHHHHHHHHhChH
Confidence 2 78999999999998764
No 61
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.28 E-value=0.00099 Score=66.06 Aligned_cols=76 Identities=22% Similarity=0.344 Sum_probs=53.5
Q ss_pred CeEEe-cccchhhh---hhcccccceee-c---CC---hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEee
Q 039436 325 GLVVR-DWAPQLEI---LAHCSTGGFMS-H---CG---WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMAD 393 (422)
Q Consensus 325 ~~~~~-~~~pq~~i---l~~~~~~~~i~-H---gG---~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~ 393 (422)
+++.. +|+|..++ |.. ++++|. + -| -++++||+++|+|+|+... ......+.+ -+.|..+.
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~--aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv~~-~~~G~lv~- 366 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLAS--ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELVKH-GENGLVFG- 366 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHh--CCEEEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHhcC-CCCEEEEC-
Confidence 55544 68876665 545 667773 1 12 3479999999999999643 244456655 46787763
Q ss_pred ccccccccCHHHHHHHHHHHhcC
Q 039436 394 WARRDEIVTSNVIENAVKRLMAS 416 (422)
Q Consensus 394 ~~~~~~~~~~~~l~~av~~~l~~ 416 (422)
+.+++++++.++++|
T Consensus 367 --------d~~~la~~i~~ll~~ 381 (415)
T cd03816 367 --------DSEELAEQLIDLLSN 381 (415)
T ss_pred --------CHHHHHHHHHHHHhc
Confidence 689999999999998
No 62
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.25 E-value=0.00043 Score=68.55 Aligned_cols=83 Identities=12% Similarity=0.107 Sum_probs=54.5
Q ss_pred CCeEEecccchhh---hhhcccccceeecCCh------hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeec
Q 039436 324 KGLVVRDWAPQLE---ILAHCSTGGFMSHCGW------NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADW 394 (422)
Q Consensus 324 ~~~~~~~~~pq~~---il~~~~~~~~i~HgG~------~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~ 394 (422)
.++.+.+|+|+.. ++..+.+.++.+..+. +.+.|++++|+|+|+....+.. ....+ + +.|+.++
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~~-- 356 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCVE-- 356 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEeC--
Confidence 3788889998765 4656343333333322 2468999999999998654321 11222 2 5677775
Q ss_pred cccccccCHHHHHHHHHHHhcCCc
Q 039436 395 ARRDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 395 ~~~~~~~~~~~l~~av~~~l~~~~ 418 (422)
.-+.++++++|.++++|++
T Consensus 357 -----~~d~~~la~~i~~l~~~~~ 375 (412)
T PRK10307 357 -----PESVEALVAAIAALARQAL 375 (412)
T ss_pred -----CCCHHHHHHHHHHHHhCHH
Confidence 3478999999999988753
No 63
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.24 E-value=0.002 Score=61.59 Aligned_cols=134 Identities=18% Similarity=0.166 Sum_probs=81.4
Q ss_pred CcceEEecCCccc-CcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhh---c-cCCCeEEecccc
Q 039436 259 NSVLYVSFGTTTA-MSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDS---V-KDKGLVVRDWAP 333 (422)
Q Consensus 259 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~---~-~~~~~~~~~~~p 333 (422)
...+++..|+... ...+.+.+++..+.+.+..+.+.+.+... ....+.+. . ...++.+.++++
T Consensus 201 ~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~------------~~~~~~~~~~~~~~~~~v~~~g~~~ 268 (377)
T cd03798 201 DKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGP------------LREALEALAAELGLEDRVTFLGAVP 268 (377)
T ss_pred CceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCc------------chHHHHHHHHhcCCcceEEEeCCCC
Confidence 3457777788754 23444555555554432333333333210 00111111 1 234788889998
Q ss_pred hhh---hhhcccccceeec----CChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHH
Q 039436 334 QLE---ILAHCSTGGFMSH----CGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVI 406 (422)
Q Consensus 334 q~~---il~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l 406 (422)
+.+ ++.. ++++|.. +.-++++||+++|+|+|+-+..+ ....+.+ .+.|...+ .-+.+++
T Consensus 269 ~~~~~~~~~~--ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~-~~~g~~~~-------~~~~~~l 334 (377)
T cd03798 269 HEEVPAYYAA--ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITD-GENGLLVP-------PGDPEAL 334 (377)
T ss_pred HHHHHHHHHh--cCeeecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcC-CcceeEEC-------CCCHHHH
Confidence 765 4555 5566632 45678999999999999865533 4445555 46677775 4588999
Q ss_pred HHHHHHHhcCCc
Q 039436 407 ENAVKRLMASKE 418 (422)
Q Consensus 407 ~~av~~~l~~~~ 418 (422)
.+++++++++++
T Consensus 335 ~~~i~~~~~~~~ 346 (377)
T cd03798 335 AEAILRLLADPW 346 (377)
T ss_pred HHHHHHHhcCcH
Confidence 999999998765
No 64
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.16 E-value=0.0012 Score=63.93 Aligned_cols=81 Identities=16% Similarity=0.206 Sum_probs=55.8
Q ss_pred CCeEEecccch-hhhhhcccccceeec----CChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccc
Q 039436 324 KGLVVRDWAPQ-LEILAHCSTGGFMSH----CGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRD 398 (422)
Q Consensus 324 ~~~~~~~~~pq-~~il~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~ 398 (422)
.++.+.++.++ ..++.. ++++|.- +.-.+++||+++|+|+|+... ...+..+.+ -..|..++
T Consensus 253 ~~v~~~g~~~~~~~~~~~--~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~----~~~~e~i~~-~~~G~~~~------ 319 (371)
T cd04962 253 DDVLFLGKQDHVEELLSI--ADLFLLPSEKESFGLAALEAMACGVPVVASNA----GGIPEVVKH-GETGFLVD------ 319 (371)
T ss_pred ceEEEecCcccHHHHHHh--cCEEEeCCCcCCCccHHHHHHHcCCCEEEeCC----CCchhhhcC-CCceEEcC------
Confidence 36777777654 345655 6677733 334599999999999998644 335555655 35776665
Q ss_pred cccCHHHHHHHHHHHhcCCc
Q 039436 399 EIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 399 ~~~~~~~l~~av~~~l~~~~ 418 (422)
.-+.+++.+++.+++++++
T Consensus 320 -~~~~~~l~~~i~~l~~~~~ 338 (371)
T cd04962 320 -VGDVEAMAEYALSLLEDDE 338 (371)
T ss_pred -CCCHHHHHHHHHHHHhCHH
Confidence 2378999999999988654
No 65
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.15 E-value=0.001 Score=63.85 Aligned_cols=134 Identities=17% Similarity=0.188 Sum_probs=81.0
Q ss_pred cceEEecCCcccCcHHHHHHHHHHHhhCC-CeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhh--
Q 039436 260 SVLYVSFGTTTAMSDEQIKELAVGLKQSN-QKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLE-- 336 (422)
Q Consensus 260 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~-- 336 (422)
..+++..|+... ...+..+++++++.. .+++++ |.+.. ...+-.-..+.-...++.+.+|+|+..
T Consensus 191 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~-G~g~~---------~~~~~~~~~~~~~~~~V~~~g~v~~~~~~ 258 (357)
T cd03795 191 RPFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIV-GEGPL---------EAELEALAAALGLLDRVRFLGRLDDEEKA 258 (357)
T ss_pred CcEEEEeccccc--ccCHHHHHHHHHhccCcEEEEE-eCChh---------HHHHHHHHHhcCCcceEEEcCCCCHHHHH
Confidence 346777788643 234555666666665 454443 32210 001111111122345899999999765
Q ss_pred -hhhccccccee--e---cCCh-hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHH
Q 039436 337 -ILAHCSTGGFM--S---HCGW-NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENA 409 (422)
Q Consensus 337 -il~~~~~~~~i--~---HgG~-~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~a 409 (422)
++.. +++++ + +-|+ .+++||+++|+|+|+....+....... + -+.|...+ .-+.+++.++
T Consensus 259 ~~~~~--ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~-~~~g~~~~-------~~d~~~~~~~ 325 (357)
T cd03795 259 ALLAA--CDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---H-GVTGLVVP-------PGDPAALAEA 325 (357)
T ss_pred HHHHh--CCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---C-CCceEEeC-------CCCHHHHHHH
Confidence 5555 55555 3 2343 379999999999999766555433322 2 36777665 3478999999
Q ss_pred HHHHhcCCc
Q 039436 410 VKRLMASKE 418 (422)
Q Consensus 410 v~~~l~~~~ 418 (422)
+.++++|++
T Consensus 326 i~~l~~~~~ 334 (357)
T cd03795 326 IRRLLEDPE 334 (357)
T ss_pred HHHHHHCHH
Confidence 999998764
No 66
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.12 E-value=0.00064 Score=66.98 Aligned_cols=132 Identities=11% Similarity=0.157 Sum_probs=74.8
Q ss_pred CcceEEecCCccc-CcHHHHHHHHHHHhhC--CCeeEEEEecCCCCCccccchhcccCChhhHhhcc-CCCeEEecccch
Q 039436 259 NSVLYVSFGTTTA-MSDEQIKELAVGLKQS--NQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVK-DKGLVVRDWAPQ 334 (422)
Q Consensus 259 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~~~~~~pq 334 (422)
...+++..|.... ...+.+.+.+..+.+. +..+++ +|.+.. ...+ ..+.++.+ ..++.+.+|+|+
T Consensus 192 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~~---------~~~l-~~~~~~~~l~~~v~~~G~~~~ 260 (398)
T cd03796 192 DKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFII-GGDGPK---------RILL-EEMREKYNLQDRVELLGAVPH 260 (398)
T ss_pred CceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEE-EeCCch---------HHHH-HHHHHHhCCCCeEEEeCCCCH
Confidence 3457777787743 3344555555544432 344443 333220 0001 11222222 335788899987
Q ss_pred hh---hhhcccccceeecC---Ch-hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHH
Q 039436 335 LE---ILAHCSTGGFMSHC---GW-NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIE 407 (422)
Q Consensus 335 ~~---il~~~~~~~~i~Hg---G~-~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~ 407 (422)
.+ +++. ++++|.-. |+ .+++||+++|+|+|+-...+ ....+.+ |.+.... .+.+++.
T Consensus 261 ~~~~~~l~~--ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~~--~~~~~~~--------~~~~~l~ 324 (398)
T cd03796 261 ERVRDVLVQ--GHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLPP--DMILLAE--------PDVESIV 324 (398)
T ss_pred HHHHHHHHh--CCEEEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhheeC--CceeecC--------CCHHHHH
Confidence 65 4544 67777532 43 39999999999999977643 2234433 4342222 2789999
Q ss_pred HHHHHHhcCC
Q 039436 408 NAVKRLMASK 417 (422)
Q Consensus 408 ~av~~~l~~~ 417 (422)
+++.+++++.
T Consensus 325 ~~l~~~l~~~ 334 (398)
T cd03796 325 RKLEEAISIL 334 (398)
T ss_pred HHHHHHHhCh
Confidence 9999998753
No 67
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.11 E-value=0.00027 Score=68.75 Aligned_cols=79 Identities=16% Similarity=0.248 Sum_probs=57.7
Q ss_pred CCeEEecccchh---hhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccc
Q 039436 324 KGLVVRDWAPQL---EILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEI 400 (422)
Q Consensus 324 ~~~~~~~~~pq~---~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~ 400 (422)
.++.+.+.+++. .++.+ ++++|+-.|.. +.||+++|+|+|..+-.++++. +.+ .|.+..+.
T Consensus 255 ~~v~~~~~~~~~~~~~~l~~--ad~vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e----~~~-~g~~~lv~-------- 318 (365)
T TIGR00236 255 KRVHLIEPLEYLDFLNLAAN--SHLILTDSGGV-QEEAPSLGKPVLVLRDTTERPE----TVE-AGTNKLVG-------- 318 (365)
T ss_pred CCEEEECCCChHHHHHHHHh--CCEEEECChhH-HHHHHHcCCCEEECCCCCCChH----HHh-cCceEEeC--------
Confidence 467777766654 45556 77999987644 7999999999999976665552 223 47776553
Q ss_pred cCHHHHHHHHHHHhcCCc
Q 039436 401 VTSNVIENAVKRLMASKE 418 (422)
Q Consensus 401 ~~~~~l~~av~~~l~~~~ 418 (422)
-++++|.++++++++|++
T Consensus 319 ~d~~~i~~ai~~ll~~~~ 336 (365)
T TIGR00236 319 TDKENITKAAKRLLTDPD 336 (365)
T ss_pred CCHHHHHHHHHHHHhChH
Confidence 378999999999998764
No 68
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.08 E-value=0.0013 Score=62.61 Aligned_cols=127 Identities=14% Similarity=0.180 Sum_probs=73.6
Q ss_pred CCcceEEecCCcc----cCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEE-eccc
Q 039436 258 KNSVLYVSFGTTT----AMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVV-RDWA 332 (422)
Q Consensus 258 ~~~vv~vs~Gs~~----~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~-~~~~ 332 (422)
+.+.|+|=+-+.. ......+.++++.|++.+..+|..-+... ...+-+++ ++.+ ..-+
T Consensus 178 ~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~----------~~~~~~~~-------~~~i~~~~v 240 (335)
T PF04007_consen 178 DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED----------QRELFEKY-------GVIIPPEPV 240 (335)
T ss_pred CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc----------hhhHHhcc-------CccccCCCC
Confidence 4466777666532 22334567799999998877443332221 00111111 2222 2344
Q ss_pred chhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHH
Q 039436 333 PQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKR 412 (422)
Q Consensus 333 pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~ 412 (422)
.-..+|.+ ++++|+=|| ....||..-|+|.|.+ +-++-...-+.+.+ .|.=.. .-+.+++.+.|++
T Consensus 241 d~~~Ll~~--a~l~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~-~Gll~~---------~~~~~ei~~~v~~ 306 (335)
T PF04007_consen 241 DGLDLLYY--ADLVIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIE-KGLLYH---------STDPDEIVEYVRK 306 (335)
T ss_pred CHHHHHHh--cCEEEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHH-CCCeEe---------cCCHHHHHHHHHH
Confidence 55589999 779999887 7788999999999975 22222222244555 466222 2366777776665
Q ss_pred Hhc
Q 039436 413 LMA 415 (422)
Q Consensus 413 ~l~ 415 (422)
.+.
T Consensus 307 ~~~ 309 (335)
T PF04007_consen 307 NLG 309 (335)
T ss_pred hhh
Confidence 554
No 69
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.07 E-value=0.00083 Score=65.00 Aligned_cols=81 Identities=19% Similarity=0.195 Sum_probs=60.5
Q ss_pred CCeEEecccchhhh---hhcccccceeecC----------ChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEE
Q 039436 324 KGLVVRDWAPQLEI---LAHCSTGGFMSHC----------GWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLV 390 (422)
Q Consensus 324 ~~~~~~~~~pq~~i---l~~~~~~~~i~Hg----------G~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~ 390 (422)
.++.+.+++|+..+ +.. ++++|.-. -.++++||+++|+|+|+-+..+ +...+.+ -+.|..
T Consensus 245 ~~v~~~g~~~~~~l~~~~~~--ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~-~~~g~~ 317 (367)
T cd05844 245 GRVTFLGAQPHAEVRELMRR--ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVED-GETGLL 317 (367)
T ss_pred CeEEECCCCCHHHHHHHHHh--CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheec-CCeeEE
Confidence 46888899987655 555 66776432 2568999999999999876643 5556655 478887
Q ss_pred EeeccccccccCHHHHHHHHHHHhcCCc
Q 039436 391 MADWARRDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 391 ~~~~~~~~~~~~~~~l~~av~~~l~~~~ 418 (422)
++ .-+.+++.+++.++++|++
T Consensus 318 ~~-------~~d~~~l~~~i~~l~~~~~ 338 (367)
T cd05844 318 VP-------EGDVAALAAALGRLLADPD 338 (367)
T ss_pred EC-------CCCHHHHHHHHHHHHcCHH
Confidence 75 3477999999999998764
No 70
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.07 E-value=0.0017 Score=69.82 Aligned_cols=82 Identities=20% Similarity=0.231 Sum_probs=56.3
Q ss_pred CeEEecccchhhh---hhcc--cccceeec---CC-hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecc
Q 039436 325 GLVVRDWAPQLEI---LAHC--STGGFMSH---CG-WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWA 395 (422)
Q Consensus 325 ~~~~~~~~pq~~i---l~~~--~~~~~i~H---gG-~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~ 395 (422)
++.+.+++++..+ +..+ +.++||.- =| -.+++||+++|+|+|+....+ ....+.+ -..|+.++
T Consensus 549 ~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~-g~nGlLVd--- 620 (1050)
T TIGR02468 549 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRV-LDNGLLVD--- 620 (1050)
T ss_pred eEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhcc-CCcEEEEC---
Confidence 5677788887664 3331 22577764 23 358999999999999986543 2233333 35677776
Q ss_pred ccccccCHHHHHHHHHHHhcCCc
Q 039436 396 RRDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~~~~ 418 (422)
.-+.++++++|.+++.|++
T Consensus 621 ----P~D~eaLA~AL~~LL~Dpe 639 (1050)
T TIGR02468 621 ----PHDQQAIADALLKLVADKQ 639 (1050)
T ss_pred ----CCCHHHHHHHHHHHhhCHH
Confidence 3478999999999998765
No 71
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.07 E-value=0.0049 Score=59.19 Aligned_cols=133 Identities=14% Similarity=0.131 Sum_probs=75.3
Q ss_pred CcceEEecCCccc-CcHHHHHHHHHHHhhCC--CeeEEEEecCCCCCccccchhcccCChhhH---hhcc-CCCeEEecc
Q 039436 259 NSVLYVSFGTTTA-MSDEQIKELAVGLKQSN--QKFIWVLRDADRGDVFNGEVRRAELPKAYE---DSVK-DKGLVVRDW 331 (422)
Q Consensus 259 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~---~~~~-~~~~~~~~~ 331 (422)
+..+++..|.... ...+.+.+++..+.+.+ .++++ +|..... ..+-..+. .+.+ ..++.+.+|
T Consensus 184 ~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~i-vG~~~~~---------~~~~~~~~~~~~~~~~~~~v~~~g~ 253 (355)
T cd03819 184 GKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLI-VGDAQGR---------RFYYAELLELIKRLGLQDRVTFVGH 253 (355)
T ss_pred CceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEE-EECCccc---------chHHHHHHHHHHHcCCcceEEEcCC
Confidence 3446666777653 34556666666666543 34433 4433210 01111111 1112 346777787
Q ss_pred cc-hhhhhhcccccceeecC----C-hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHH
Q 039436 332 AP-QLEILAHCSTGGFMSHC----G-WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNV 405 (422)
Q Consensus 332 ~p-q~~il~~~~~~~~i~Hg----G-~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~ 405 (422)
.+ ...++.. ++++|+=. | -++++||+++|+|+|+.-.. .+...+.+ -+.|..++ .-+.++
T Consensus 254 ~~~~~~~l~~--ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i~~-~~~g~~~~-------~~~~~~ 319 (355)
T cd03819 254 CSDMPAAYAL--ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETVRP-GETGLLVP-------PGDAEA 319 (355)
T ss_pred cccHHHHHHh--CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHHhC-CCceEEeC-------CCCHHH
Confidence 43 2345655 55666422 3 35999999999999987543 33445544 35787775 348889
Q ss_pred HHHHHHHHhc
Q 039436 406 IENAVKRLMA 415 (422)
Q Consensus 406 l~~av~~~l~ 415 (422)
+.+++..++.
T Consensus 320 l~~~i~~~~~ 329 (355)
T cd03819 320 LAQALDQILS 329 (355)
T ss_pred HHHHHHHHHh
Confidence 9999965554
No 72
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.04 E-value=0.0022 Score=61.53 Aligned_cols=79 Identities=16% Similarity=0.141 Sum_probs=55.8
Q ss_pred CCCeEEecccchhhh---hhcccccceeecCC----hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecc
Q 039436 323 DKGLVVRDWAPQLEI---LAHCSTGGFMSHCG----WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWA 395 (422)
Q Consensus 323 ~~~~~~~~~~pq~~i---l~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~ 395 (422)
..++.+.+|+++..+ +.. ++++|.-.- -++++||+++|+|+|+.+.. .....+.+ +.|....
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~--adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~~~--~~~~~~~--- 329 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALAD--ADLFVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELIEY--GCGWVVD--- 329 (375)
T ss_pred cceEEEcCCCChHHHHHHHhh--CCEEEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHhhc--CceEEeC---
Confidence 347888899997654 555 666665332 46899999999999997543 23444433 6776664
Q ss_pred ccccccCHHHHHHHHHHHhcCC
Q 039436 396 RRDEIVTSNVIENAVKRLMASK 417 (422)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~~~ 417 (422)
-+.+++.+++.++++++
T Consensus 330 -----~~~~~~~~~i~~l~~~~ 346 (375)
T cd03821 330 -----DDVDALAAALRRALELP 346 (375)
T ss_pred -----CChHHHHHHHHHHHhCH
Confidence 13499999999999875
No 73
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.04 E-value=0.0014 Score=63.00 Aligned_cols=135 Identities=20% Similarity=0.230 Sum_probs=80.2
Q ss_pred CcceEEecCCccc-CcHHHHHHHHHHHhhC--CCeeEEEEecCCCCCccccchhcccCChhhHhhc-cCCCeEEecccch
Q 039436 259 NSVLYVSFGTTTA-MSDEQIKELAVGLKQS--NQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSV-KDKGLVVRDWAPQ 334 (422)
Q Consensus 259 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~~~~~~~pq 334 (422)
.++.++.+|+... ...+.+.+.+..+.+. +..++++ |.... ...+ ..+.++. ...++.+.+++|+
T Consensus 178 ~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~-G~~~~---------~~~~-~~~~~~~~~~~~v~~~g~~~~ 246 (355)
T cd03799 178 EPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIV-GDGPL---------RDEL-EALIAELGLEDRVTLLGAKSQ 246 (355)
T ss_pred CCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEE-ECCcc---------HHHH-HHHHHHcCCCCeEEECCcCCh
Confidence 3456677787643 3445555555555544 3344433 32210 0001 1111111 2347888899986
Q ss_pred hh---hhhcccccceeec----------CChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecccccccc
Q 039436 335 LE---ILAHCSTGGFMSH----------CGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIV 401 (422)
Q Consensus 335 ~~---il~~~~~~~~i~H----------gG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~ 401 (422)
.+ ++.+ ++++|.- |.-++++||+++|+|+|+.+... ....+.+ -..|..+. .-
T Consensus 247 ~~l~~~~~~--adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~-~~~g~~~~-------~~ 312 (355)
T cd03799 247 EEVRELLRA--ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVED-GETGLLVP-------PG 312 (355)
T ss_pred HHHHHHHHh--CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhC-CCceEEeC-------CC
Confidence 65 4445 6677763 23468999999999999875432 2334444 34787775 23
Q ss_pred CHHHHHHHHHHHhcCCc
Q 039436 402 TSNVIENAVKRLMASKE 418 (422)
Q Consensus 402 ~~~~l~~av~~~l~~~~ 418 (422)
+.+++.+++.+++++++
T Consensus 313 ~~~~l~~~i~~~~~~~~ 329 (355)
T cd03799 313 DPEALADAIERLLDDPE 329 (355)
T ss_pred CHHHHHHHHHHHHhCHH
Confidence 88999999999998764
No 74
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.03 E-value=2.9e-05 Score=62.95 Aligned_cols=112 Identities=21% Similarity=0.282 Sum_probs=72.4
Q ss_pred ceEEecCCcccCcHH---HHHHHHHHHhhCC-CeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEE--ecccch
Q 039436 261 VLYVSFGTTTAMSDE---QIKELAVGLKQSN-QKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVV--RDWAPQ 334 (422)
Q Consensus 261 vv~vs~Gs~~~~~~~---~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~--~~~~pq 334 (422)
.+||+-||....+.- .-.+..+.|.+.| .+.|..+|.+... .++......+..++.+ .+|-|-
T Consensus 5 ~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~-----------~~d~~~~~~k~~gl~id~y~f~ps 73 (170)
T KOG3349|consen 5 TVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPF-----------FGDPIDLIRKNGGLTIDGYDFSPS 73 (170)
T ss_pred EEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccC-----------CCCHHHhhcccCCeEEEEEecCcc
Confidence 599999998742221 1233567777787 4677777765311 1222222113334443 355664
Q ss_pred -hhhhhcccccceeecCChhhHHHHHhcCCcEEccCc--cc--chhhHHHHHHhhcC
Q 039436 335 -LEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPM--HS--DQPRNTLLITHLLK 386 (422)
Q Consensus 335 -~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~--~~--Dq~~na~~~~~~~g 386 (422)
.+..+. ++++|+|+|.||++|.+..|+|.|+++- .. -|..-|..+++ .|
T Consensus 74 l~e~I~~--AdlVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~-eg 127 (170)
T KOG3349|consen 74 LTEDIRS--ADLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAE-EG 127 (170)
T ss_pred HHHHHhh--ccEEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHh-cC
Confidence 444544 7799999999999999999999999984 22 47788888877 35
No 75
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.95 E-value=0.0022 Score=61.78 Aligned_cols=79 Identities=16% Similarity=0.159 Sum_probs=49.3
Q ss_pred CCCeEEecccchhhhhhc-ccccceeecCCh-----hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccc
Q 039436 323 DKGLVVRDWAPQLEILAH-CSTGGFMSHCGW-----NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWAR 396 (422)
Q Consensus 323 ~~~~~~~~~~pq~~il~~-~~~~~~i~HgG~-----~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~ 396 (422)
..++.+.+++++.++... .++++++.+.-. ++++||+++|+|+|+..... +...+.+ .|....
T Consensus 247 ~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~---~g~~~~---- 315 (363)
T cd04955 247 DPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVLGD---KAIYFK---- 315 (363)
T ss_pred CCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceeecC---CeeEec----
Confidence 458889999998764432 235666665443 47999999999999875432 1122221 233333
Q ss_pred cccccCHHHHHHHHHHHhcCC
Q 039436 397 RDEIVTSNVIENAVKRLMASK 417 (422)
Q Consensus 397 ~~~~~~~~~l~~av~~~l~~~ 417 (422)
. .+.+.+++.++++++
T Consensus 316 -~----~~~l~~~i~~l~~~~ 331 (363)
T cd04955 316 -V----GDDLASLLEELEADP 331 (363)
T ss_pred -C----chHHHHHHHHHHhCH
Confidence 1 112888888888764
No 76
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.91 E-value=0.004 Score=59.76 Aligned_cols=80 Identities=16% Similarity=0.272 Sum_probs=55.3
Q ss_pred CCeEEec-ccchhh---hhhcccccceeec------CChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEee
Q 039436 324 KGLVVRD-WAPQLE---ILAHCSTGGFMSH------CGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMAD 393 (422)
Q Consensus 324 ~~~~~~~-~~pq~~---il~~~~~~~~i~H------gG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~ 393 (422)
.++.+.+ |+|+.+ ++.. ++++|.- +--++++||+++|+|+|+-+..+ ...+.+ -+.|..+.
T Consensus 247 ~~v~~~~~~~~~~~~~~~~~~--ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~-~~~g~~~~- 317 (366)
T cd03822 247 DRVIFINRYLPDEELPELFSA--ADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLD-GGTGLLVP- 317 (366)
T ss_pred CcEEEecCcCCHHHHHHHHhh--cCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeee-CCCcEEEc-
Confidence 4666664 488754 4444 6677732 33458899999999999987654 233444 46777775
Q ss_pred ccccccccCHHHHHHHHHHHhcCCc
Q 039436 394 WARRDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 394 ~~~~~~~~~~~~l~~av~~~l~~~~ 418 (422)
.-+.+++.+++.++++|++
T Consensus 318 ------~~d~~~~~~~l~~l~~~~~ 336 (366)
T cd03822 318 ------PGDPAALAEAIRRLLADPE 336 (366)
T ss_pred ------CCCHHHHHHHHHHHHcChH
Confidence 2368999999999998743
No 77
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.87 E-value=0.0055 Score=57.97 Aligned_cols=80 Identities=15% Similarity=0.174 Sum_probs=52.1
Q ss_pred CCeEEecccch-hhhhhcccccceeec----CChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccc
Q 039436 324 KGLVVRDWAPQ-LEILAHCSTGGFMSH----CGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRD 398 (422)
Q Consensus 324 ~~~~~~~~~pq-~~il~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~ 398 (422)
.++.+.++.+. ..++.. ++++|.- |.-++++||+++|+|+|+-... .....+.+ -+.|...+
T Consensus 246 ~~v~~~g~~~~~~~~~~~--~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~-~~~g~~~~------ 312 (353)
T cd03811 246 DRVHFLGFQSNPYPYLKA--ADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILED-GENGLLVP------ 312 (353)
T ss_pred ccEEEecccCCHHHHHHh--CCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcC-CCceEEEC------
Confidence 36777777654 246666 6677643 2356899999999999986443 45556666 57888776
Q ss_pred cccCHHHH---HHHHHHHhcCC
Q 039436 399 EIVTSNVI---ENAVKRLMASK 417 (422)
Q Consensus 399 ~~~~~~~l---~~av~~~l~~~ 417 (422)
.-+.+.+ .+++..++.++
T Consensus 313 -~~~~~~~~~~~~~i~~~~~~~ 333 (353)
T cd03811 313 -VGDEAALAAAALALLDLLLDP 333 (353)
T ss_pred -CCCHHHHHHHHHHHHhccCCh
Confidence 3366666 45555555544
No 78
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.86 E-value=0.0078 Score=59.74 Aligned_cols=79 Identities=16% Similarity=0.156 Sum_probs=52.7
Q ss_pred CCeEEecccchhh---hhhcccccceee-----cCChhhHHHHHhcCCcEEccCcccchhhHHHHHH---hhcCeEEEEe
Q 039436 324 KGLVVRDWAPQLE---ILAHCSTGGFMS-----HCGWNSCMESITMGVPIVAWPMHSDQPRNTLLIT---HLLKLGLVMA 392 (422)
Q Consensus 324 ~~~~~~~~~pq~~---il~~~~~~~~i~-----HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~---~~~g~g~~~~ 392 (422)
.++.+.+++|+.+ +|.. ++++|+ |-| .++.||+++|+|.|+.-..+.- ...+. + -..|....
T Consensus 305 ~~V~f~g~v~~~~l~~~l~~--adv~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp~---~~iv~~~~~-g~~G~l~~ 377 (419)
T cd03806 305 DKVEFVVNAPFEELLEELST--ASIGLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGPL---LDIVVPWDG-GPTGFLAS 377 (419)
T ss_pred CeEEEecCCCHHHHHHHHHh--CeEEEECCccCCcc-cHHHHHHHcCCcEEEEcCCCCc---hheeeccCC-CCceEEeC
Confidence 4788889998776 4555 566664 333 3789999999999986543211 11222 2 24665542
Q ss_pred eccccccccCHHHHHHHHHHHhcCCc
Q 039436 393 DWARRDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 393 ~~~~~~~~~~~~~l~~av~~~l~~~~ 418 (422)
+.+++++++.+++++++
T Consensus 378 ---------d~~~la~ai~~ll~~~~ 394 (419)
T cd03806 378 ---------TAEEYAEAIEKILSLSE 394 (419)
T ss_pred ---------CHHHHHHHHHHHHhCCH
Confidence 78999999999998653
No 79
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=97.78 E-value=0.017 Score=55.53 Aligned_cols=132 Identities=12% Similarity=0.156 Sum_probs=76.8
Q ss_pred cceEEecCCccc-CcHHHHHHHHHHHhhC--CCeeEEEEecCCCCCccccchhcccCChhhHhh---c-cCCCeEEeccc
Q 039436 260 SVLYVSFGTTTA-MSDEQIKELAVGLKQS--NQKFIWVLRDADRGDVFNGEVRRAELPKAYEDS---V-KDKGLVVRDWA 332 (422)
Q Consensus 260 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~---~-~~~~~~~~~~~ 332 (422)
..+++..|++.. ...+.+.+.+..|.+. +.++++ +|.+. ..+.+.+. . -..++.+.++.
T Consensus 192 ~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~i-vG~g~-------------~~~~~~~~~~~~~~~~~v~~~g~~ 257 (358)
T cd03812 192 KFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLL-VGDGE-------------LEEEIKKKVKELGLEDKVIFLGVR 257 (358)
T ss_pred CEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEE-EeCCc-------------hHHHHHHHHHhcCCCCcEEEeccc
Confidence 446666777643 3345555555655543 344444 33322 01111111 1 13467777764
Q ss_pred ch-hhhhhcccccceeec----CChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHH
Q 039436 333 PQ-LEILAHCSTGGFMSH----CGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIE 407 (422)
Q Consensus 333 pq-~~il~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~ 407 (422)
.+ ..++.. ++++|.- |--++++||+++|+|+|+--..+ ....+.+ +.|.... .-+.++++
T Consensus 258 ~~~~~~~~~--adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~--~~~~~~~-------~~~~~~~a 322 (358)
T cd03812 258 NDVPELLQA--MDVFLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD--LVKFLSL-------DESPEIWA 322 (358)
T ss_pred CCHHHHHHh--cCEEEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc--CccEEeC-------CCCHHHHH
Confidence 33 446655 5666653 34578999999999999875544 2333433 5555554 23579999
Q ss_pred HHHHHHhcCCccc
Q 039436 408 NAVKRLMASKEGD 420 (422)
Q Consensus 408 ~av~~~l~~~~~~ 420 (422)
++|.++++|++.+
T Consensus 323 ~~i~~l~~~~~~~ 335 (358)
T cd03812 323 EEILKLKSEDRRE 335 (358)
T ss_pred HHHHHHHhCcchh
Confidence 9999999987654
No 80
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.77 E-value=0.0086 Score=57.60 Aligned_cols=63 Identities=19% Similarity=0.326 Sum_probs=54.8
Q ss_pred eeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcCCcc
Q 039436 346 FMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMASKEG 419 (422)
Q Consensus 346 ~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~ 419 (422)
|+-+||+| .+|++++|+|+|.=|+...|.+-++++.+ .|.|+.++ +++.+.+++..+++|++.
T Consensus 327 lv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~-~ga~~~v~---------~~~~l~~~v~~l~~~~~~ 389 (419)
T COG1519 327 LVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQ-AGAGLQVE---------DADLLAKAVELLLADEDK 389 (419)
T ss_pred ccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHh-cCCeEEEC---------CHHHHHHHHHHhcCCHHH
Confidence 45699998 89999999999999999999999999999 79999997 378888888877776543
No 81
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.75 E-value=0.0062 Score=59.96 Aligned_cols=81 Identities=22% Similarity=0.254 Sum_probs=56.0
Q ss_pred cCCCeEEecccchh-hhhhccccccee--ec--CCh-hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecc
Q 039436 322 KDKGLVVRDWAPQL-EILAHCSTGGFM--SH--CGW-NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWA 395 (422)
Q Consensus 322 ~~~~~~~~~~~pq~-~il~~~~~~~~i--~H--gG~-~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~ 395 (422)
...++.+.+++++. .++.+ +++|| ++ .|. +.++||+++|+|+|+.+...+.. ... -|.|..+.
T Consensus 278 ~~~~V~~~G~v~~~~~~~~~--adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~-~~~g~lv~--- 346 (397)
T TIGR03087 278 ALPGVTVTGSVADVRPYLAH--AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DAL-PGAELLVA--- 346 (397)
T ss_pred cCCCeEEeeecCCHHHHHHh--CCEEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----ccc-CCcceEeC---
Confidence 34578888998853 35555 66776 32 354 36999999999999987643321 112 35666553
Q ss_pred ccccccCHHHHHHHHHHHhcCCc
Q 039436 396 RRDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~~~~ 418 (422)
-+.+++.+++.++++|++
T Consensus 347 -----~~~~~la~ai~~ll~~~~ 364 (397)
T TIGR03087 347 -----ADPADFAAAILALLANPA 364 (397)
T ss_pred -----CCHHHHHHHHHHHHcCHH
Confidence 378999999999998764
No 82
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.73 E-value=0.0041 Score=59.78 Aligned_cols=76 Identities=12% Similarity=0.166 Sum_probs=51.0
Q ss_pred CCeEEecccch-hhhhhcccccceeecCC----hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccc
Q 039436 324 KGLVVRDWAPQ-LEILAHCSTGGFMSHCG----WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRD 398 (422)
Q Consensus 324 ~~~~~~~~~pq-~~il~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~ 398 (422)
.++.+.++..+ ..++.. ++++|.-.. -++++||+++|+|+|+. |...+...+.+ .|. .+.
T Consensus 245 ~~v~~~g~~~~~~~~~~~--ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~-~g~--~~~------ 309 (360)
T cd04951 245 NRVKLLGLRDDIAAYYNA--ADLFVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGD-SGL--IVP------ 309 (360)
T ss_pred CcEEEecccccHHHHHHh--hceEEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecC-Cce--EeC------
Confidence 36777777643 456666 556665432 56899999999999975 44445555544 343 343
Q ss_pred cccCHHHHHHHHHHHhc
Q 039436 399 EIVTSNVIENAVKRLMA 415 (422)
Q Consensus 399 ~~~~~~~l~~av~~~l~ 415 (422)
.-+.+++.+++.++++
T Consensus 310 -~~~~~~~~~~i~~ll~ 325 (360)
T cd04951 310 -ISDPEALANKIDEILK 325 (360)
T ss_pred -CCCHHHHHHHHHHHHh
Confidence 2478899999999984
No 83
>PLN02275 transferase, transferring glycosyl groups
Probab=97.71 E-value=0.057 Score=52.66 Aligned_cols=75 Identities=20% Similarity=0.311 Sum_probs=52.2
Q ss_pred CCeEEec-ccchhhh---hhcccccceee-c---CC---hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEe
Q 039436 324 KGLVVRD-WAPQLEI---LAHCSTGGFMS-H---CG---WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMA 392 (422)
Q Consensus 324 ~~~~~~~-~~pq~~i---l~~~~~~~~i~-H---gG---~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~ 392 (422)
.|+++.+ |+|+.++ ++. +++||. + -| -++++||+++|+|+|+.-. ..+...+.+ -+.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~--aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~----gg~~eiv~~-g~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGS--ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIGELVKD-GKNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHh--CCEEEEeccccccccccHHHHHHHHCCCCEEEecC----CChHHHccC-CCCeEEEC
Confidence 3555544 7888766 655 778874 1 12 3579999999999999743 235556655 46888774
Q ss_pred eccccccccCHHHHHHHHHHHh
Q 039436 393 DWARRDEIVTSNVIENAVKRLM 414 (422)
Q Consensus 393 ~~~~~~~~~~~~~l~~av~~~l 414 (422)
+.+++.+++.++|
T Consensus 359 ---------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 ---------SSSELADQLLELL 371 (371)
T ss_pred ---------CHHHHHHHHHHhC
Confidence 4789999998875
No 84
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.65 E-value=0.0058 Score=58.59 Aligned_cols=135 Identities=15% Similarity=0.160 Sum_probs=74.7
Q ss_pred cceEEecCCccc-CcHHHHHHHHHHHhhCC--CeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhh
Q 039436 260 SVLYVSFGTTTA-MSDEQIKELAVGLKQSN--QKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLE 336 (422)
Q Consensus 260 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~ 336 (422)
..+++..|+... ...+.+.+++..+.+.+ .+++++ +...... ...-..+.+.....++.+.+++|+..
T Consensus 195 ~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~-G~~~~~~--------~~~~~~~~~~~~~~~v~~~g~~~~~~ 265 (365)
T cd03809 195 RPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIV-GKRGWLN--------EELLARLRELGLGDRVRFLGYVSDEE 265 (365)
T ss_pred CCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEe-cCCcccc--------HHHHHHHHHcCCCCeEEECCCCChhH
Confidence 346667788753 23455555555554443 344433 3221000 00000001122345788889998875
Q ss_pred ---hhhcccccceeec----CChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHH
Q 039436 337 ---ILAHCSTGGFMSH----CGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENA 409 (422)
Q Consensus 337 ---il~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~a 409 (422)
++.. ++++|.- +.-++++||+++|+|+|+-...+ ....+ . ..|..+. .-+.+++.++
T Consensus 266 ~~~~~~~--~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~--~~~~~~~-------~~~~~~~~~~ 329 (365)
T cd03809 266 LAALYRG--ARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-G--DAALYFD-------PLDPEALAAA 329 (365)
T ss_pred HHHHHhh--hhhhcccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-c--CceeeeC-------CCCHHHHHHH
Confidence 4555 5565533 23458999999999999865422 11122 2 2344444 2378999999
Q ss_pred HHHHhcCCcc
Q 039436 410 VKRLMASKEG 419 (422)
Q Consensus 410 v~~~l~~~~~ 419 (422)
+.+++.|++.
T Consensus 330 i~~l~~~~~~ 339 (365)
T cd03809 330 IERLLEDPAL 339 (365)
T ss_pred HHHHhcCHHH
Confidence 9998887653
No 85
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.61 E-value=0.0027 Score=60.94 Aligned_cols=75 Identities=19% Similarity=0.137 Sum_probs=53.2
Q ss_pred hhhhhhcccccceeecCChhhHHHHHhcCCcEEccCccc--chhhHHHHHHhh--cCeEEEEee--------cccccccc
Q 039436 334 QLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHS--DQPRNTLLITHL--LKLGLVMAD--------WARRDEIV 401 (422)
Q Consensus 334 q~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~--Dq~~na~~~~~~--~g~g~~~~~--------~~~~~~~~ 401 (422)
-..++.. +++.|+-+|..|+ |+..+|+|||+ +.-. =|+.||+++.+. .|+.--+.+ .+--.+++
T Consensus 229 ~~~~m~~--aDlal~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~ 304 (347)
T PRK14089 229 THKALLE--AEFAFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFV 304 (347)
T ss_pred HHHHHHh--hhHHHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccC
Confidence 3457777 8899999999999 99999999999 5543 478899999831 343322310 01014568
Q ss_pred CHHHHHHHHHH
Q 039436 402 TSNVIENAVKR 412 (422)
Q Consensus 402 ~~~~l~~av~~ 412 (422)
|++.|.+++.+
T Consensus 305 t~~~la~~i~~ 315 (347)
T PRK14089 305 TVENLLKAYKE 315 (347)
T ss_pred CHHHHHHHHHH
Confidence 99999988865
No 86
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.55 E-value=0.04 Score=52.43 Aligned_cols=78 Identities=18% Similarity=0.258 Sum_probs=52.4
Q ss_pred CeEEecccc-hhhhhhcccccceeecCCh----hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecccccc
Q 039436 325 GLVVRDWAP-QLEILAHCSTGGFMSHCGW----NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDE 399 (422)
Q Consensus 325 ~~~~~~~~p-q~~il~~~~~~~~i~HgG~----~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~ 399 (422)
++.+.+... -..++.. ++++|....+ +++.||+++|+|+|+... ..+...+.+ .|..+.
T Consensus 252 ~v~~~g~~~~~~~~~~~--adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~~~---~g~~~~------- 315 (365)
T cd03807 252 KVILLGERSDVPALLNA--LDVFVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELVGD---TGFLVP------- 315 (365)
T ss_pred eEEEccccccHHHHHHh--CCEEEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHhhc---CCEEeC-------
Confidence 455544332 3346666 7788876554 799999999999998543 334444433 455554
Q ss_pred ccCHHHHHHHHHHHhcCCc
Q 039436 400 IVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 400 ~~~~~~l~~av~~~l~~~~ 418 (422)
.-+.+++.+++.+++++++
T Consensus 316 ~~~~~~l~~~i~~l~~~~~ 334 (365)
T cd03807 316 PGDPEALAEAIEALLADPA 334 (365)
T ss_pred CCCHHHHHHHHHHHHhChH
Confidence 2368999999999998753
No 87
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=97.52 E-value=0.012 Score=56.04 Aligned_cols=127 Identities=9% Similarity=0.105 Sum_probs=75.4
Q ss_pred eEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhc-cCCCeEEecccchhh---h
Q 039436 262 LYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSV-KDKGLVVRDWAPQLE---I 337 (422)
Q Consensus 262 v~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~~~~~~~pq~~---i 337 (422)
+.+..|... ..+....+++++++.+.+++++ |..... ..+-....+.. ...++.+.+++++.. +
T Consensus 173 ~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~-G~~~~~---------~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~ 240 (335)
T cd03802 173 YLLFLGRIS--PEKGPHLAIRAARRAGIPLKLA-GPVSDP---------DYFYREIAPELLDGPDIEYLGEVGGAEKAEL 240 (335)
T ss_pred EEEEEEeec--cccCHHHHHHHHHhcCCeEEEE-eCCCCH---------HHHHHHHHHhcccCCcEEEeCCCCHHHHHHH
Confidence 445557763 2234556777787777776654 433210 00001111111 245888999999865 4
Q ss_pred hhcccccceee----cCCh-hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHH
Q 039436 338 LAHCSTGGFMS----HCGW-NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKR 412 (422)
Q Consensus 338 l~~~~~~~~i~----HgG~-~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~ 412 (422)
++. .++++. +-|+ .+++||+++|+|+|+.... .+...+.+ -..|...+ . .+++.+++++
T Consensus 241 ~~~--~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i~~-~~~g~l~~-----~----~~~l~~~l~~ 304 (335)
T cd03802 241 LGN--ARALLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVVED-GVTGFLVD-----S----VEELAAAVAR 304 (335)
T ss_pred HHh--CcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCC----CchhheeC-CCcEEEeC-----C----HHHHHHHHHH
Confidence 555 556653 2343 4899999999999987553 33344444 23677665 2 8899999988
Q ss_pred HhcC
Q 039436 413 LMAS 416 (422)
Q Consensus 413 ~l~~ 416 (422)
++..
T Consensus 305 l~~~ 308 (335)
T cd03802 305 ADRL 308 (335)
T ss_pred Hhcc
Confidence 7653
No 88
>PLN02846 digalactosyldiacylglycerol synthase
Probab=97.40 E-value=0.079 Score=52.87 Aligned_cols=74 Identities=14% Similarity=0.091 Sum_probs=50.2
Q ss_pred EEecccchhhhhhcccccceeecC----ChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccC
Q 039436 327 VVRDWAPQLEILAHCSTGGFMSHC----GWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVT 402 (422)
Q Consensus 327 ~~~~~~pq~~il~~~~~~~~i~Hg----G~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~ 402 (422)
+..++.....++.. .++||.-+ =-++++||+++|+|.|+.-.-. | ..+.+ -+.|...+ +
T Consensus 287 vf~G~~~~~~~~~~--~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~-~~ng~~~~---------~ 349 (462)
T PLN02846 287 VYPGRDHADPLFHD--YKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQ-FPNCRTYD---------D 349 (462)
T ss_pred EECCCCCHHHHHHh--CCEEEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeec-CCceEecC---------C
Confidence 35566666678877 78998774 3578999999999999985432 2 33333 24443332 5
Q ss_pred HHHHHHHHHHHhcCC
Q 039436 403 SNVIENAVKRLMASK 417 (422)
Q Consensus 403 ~~~l~~av~~~l~~~ 417 (422)
.+++.+++.++|.++
T Consensus 350 ~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 350 GKGFVRATLKALAEE 364 (462)
T ss_pred HHHHHHHHHHHHccC
Confidence 778888888888753
No 89
>PLN00142 sucrose synthase
Probab=97.38 E-value=0.027 Score=59.55 Aligned_cols=60 Identities=17% Similarity=0.266 Sum_probs=40.4
Q ss_pred ccceeec---CChh-hHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHh
Q 039436 343 TGGFMSH---CGWN-SCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLM 414 (422)
Q Consensus 343 ~~~~i~H---gG~~-s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l 414 (422)
.++||.- =|+| +++||+++|+|+|+....+ ....+.+ -..|..++ .-+.+++.++|.+++
T Consensus 667 aDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~d-G~tG~LV~-------P~D~eaLA~aI~~lL 730 (815)
T PLN00142 667 KGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVD-GVSGFHID-------PYHGDEAANKIADFF 730 (815)
T ss_pred CCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcC-CCcEEEeC-------CCCHHHHHHHHHHHH
Confidence 4577753 3444 8999999999999865433 4445554 35688876 236777777776544
No 90
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.29 E-value=0.0034 Score=60.48 Aligned_cols=132 Identities=16% Similarity=0.180 Sum_probs=77.5
Q ss_pred cCCcceEEecCCcccCc-H---HHHHHHHHHHhhC-CCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecc
Q 039436 257 EKNSVLYVSFGTTTAMS-D---EQIKELAVGLKQS-NQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDW 331 (422)
Q Consensus 257 ~~~~vv~vs~Gs~~~~~-~---~~~~~~~~~l~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~ 331 (422)
.+++.++|++=...... + +++.+++++|.+. +.++||.+...+.+. ..+ .....+. +++++...
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~--------~~i-~~~l~~~--~~v~~~~~ 246 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGS--------DII-IEKLKKY--DNVRLIEP 246 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHH--------HHH-HHHHTT---TTEEEE--
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHH--------HHH-HHHhccc--CCEEEECC
Confidence 56778999985555544 3 4566667777666 788999887543111 111 1111222 27777766
Q ss_pred cc---hhhhhhcccccceeecCChhhHH-HHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHH
Q 039436 332 AP---QLEILAHCSTGGFMSHCGWNSCM-ESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIE 407 (422)
Q Consensus 332 ~p---q~~il~~~~~~~~i~HgG~~s~~-eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~ 407 (422)
.+ ...+|.+ ++++|+..| ++. ||.+.|+|.|.+ -|+-..-.-+. .|..+-+ ..++++|.
T Consensus 247 l~~~~~l~ll~~--a~~vvgdSs--GI~eEa~~lg~P~v~i---R~~geRqe~r~--~~~nvlv--------~~~~~~I~ 309 (346)
T PF02350_consen 247 LGYEEYLSLLKN--ADLVVGDSS--GIQEEAPSLGKPVVNI---RDSGERQEGRE--RGSNVLV--------GTDPEAII 309 (346)
T ss_dssp --HHHHHHHHHH--ESEEEESSH--HHHHHGGGGT--EEEC---SSS-S-HHHHH--TTSEEEE--------TSSHHHHH
T ss_pred CCHHHHHHHHhc--ceEEEEcCc--cHHHHHHHhCCeEEEe---cCCCCCHHHHh--hcceEEe--------CCCHHHHH
Confidence 55 4557778 779999999 566 999999999999 33333323232 3666554 36899999
Q ss_pred HHHHHHhcC
Q 039436 408 NAVKRLMAS 416 (422)
Q Consensus 408 ~av~~~l~~ 416 (422)
+++++++.+
T Consensus 310 ~ai~~~l~~ 318 (346)
T PF02350_consen 310 QAIEKALSD 318 (346)
T ss_dssp HHHHHHHH-
T ss_pred HHHHHHHhC
Confidence 999999976
No 91
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.26 E-value=0.25 Score=52.04 Aligned_cols=81 Identities=19% Similarity=0.206 Sum_probs=54.6
Q ss_pred CCCeEEecccch-hhhhhcccccceee---cCC-hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecccc
Q 039436 323 DKGLVVRDWAPQ-LEILAHCSTGGFMS---HCG-WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARR 397 (422)
Q Consensus 323 ~~~~~~~~~~pq-~~il~~~~~~~~i~---HgG-~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~ 397 (422)
..++.+.+|.++ ..++.. +++||. +-| -++++||+++|+|+|+.... -+...+.+ -..|..++
T Consensus 573 ~~~V~flG~~~dv~~ll~a--aDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~d-g~~GlLv~----- 640 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQ--FNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQE-GVTGLTLP----- 640 (694)
T ss_pred CCcEEEcCCcchHHHHHHh--cCEEEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccC-CCCEEEeC-----
Confidence 346778788764 335555 677775 445 56899999999999997653 24445555 34688886
Q ss_pred ccccCHHHHHHHHHHHhc
Q 039436 398 DEIVTSNVIENAVKRLMA 415 (422)
Q Consensus 398 ~~~~~~~~l~~av~~~l~ 415 (422)
.++.+.+++.+++.+++.
T Consensus 641 ~~d~~~~~La~aL~~ll~ 658 (694)
T PRK15179 641 ADTVTAPDVAEALARIHD 658 (694)
T ss_pred CCCCChHHHHHHHHHHHh
Confidence 445566777777766665
No 92
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.24 E-value=0.023 Score=57.81 Aligned_cols=175 Identities=9% Similarity=0.064 Sum_probs=87.6
Q ss_pred CCcccccC-CCCcCCCCCCCCCCCccccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHh--hC--CCeeEEEEec
Q 039436 223 TFNHWALG-PFNPVTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLK--QS--NQKFIWVLRD 297 (422)
Q Consensus 223 ~~~~~~VG-Pl~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~--~~--~~~~v~~~~~ 297 (422)
+-++.+|| |+...... .....+..+-+.-.++.++|-+-.||-.+-=...+-.++++.+ .. ..+|+.....
T Consensus 380 gv~v~yVGHPL~d~i~~----~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~fvvp~a~ 455 (608)
T PRK01021 380 PLRTVYLGHPLVETISS----FSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQLLVSSAN 455 (608)
T ss_pred CCCeEEECCcHHhhccc----CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEEEEecCc
Confidence 57899999 77532110 0111111222222235678999999985422222333444444 22 3456543221
Q ss_pred CCCCCccccchhcccCChhhHhhccCCC---eEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCc-ccc
Q 039436 298 ADRGDVFNGEVRRAELPKAYEDSVKDKG---LVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPM-HSD 373 (422)
Q Consensus 298 ~~~~~~~~~~~~~~~lp~~~~~~~~~~~---~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~-~~D 373 (422)
.. ..+.+.+...+.+ +.+..--....+++. +++.+.-+|-. ++|+...|+|||++=- ..=
T Consensus 456 ~~-------------~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~a--aD~aLaaSGTa-TLEaAL~g~PmVV~YK~s~L 519 (608)
T PRK01021 456 PK-------------YDHLILEVLQQEGCLHSHIVPSQFRYELMRE--CDCALAKCGTI-VLETALNQTPTIVTCQLRPF 519 (608)
T ss_pred hh-------------hHHHHHHHHhhcCCCCeEEecCcchHHHHHh--cCeeeecCCHH-HHHHHHhCCCEEEEEecCHH
Confidence 11 0112222221112 122210012467776 77889888875 6899999999998621 111
Q ss_pred hhhHHHHHHhh--cCe-------EEEEeecccc--ccccCHHHHHHHHHHHhcCCcc
Q 039436 374 QPRNTLLITHL--LKL-------GLVMADWARR--DEIVTSNVIENAVKRLMASKEG 419 (422)
Q Consensus 374 q~~na~~~~~~--~g~-------g~~~~~~~~~--~~~~~~~~l~~av~~~l~~~~~ 419 (422)
-..-++++.+. -=+ |..+-+ |-- .++.|+++|.+++ ++|.|+++
T Consensus 520 ty~Iak~Lvki~i~yIsLpNIIagr~VvP-EllqgQ~~~tpe~La~~l-~lL~d~~~ 574 (608)
T PRK01021 520 DTFLAKYIFKIILPAYSLPNIILGSTIFP-EFIGGKKDFQPEEVAAAL-DILKTSQS 574 (608)
T ss_pred HHHHHHHHHhccCCeeehhHHhcCCCcch-hhcCCcccCCHHHHHHHH-HHhcCHHH
Confidence 23445565440 001 112111 110 2478999999997 78887654
No 93
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.15 E-value=0.0053 Score=49.14 Aligned_cols=107 Identities=17% Similarity=0.248 Sum_probs=66.8
Q ss_pred eEEecCCcccCcHHHHHH--HHHHHhhCCCeeEEEEecCCCCCccccchhcccCC-hhhHhhccCCCeEEecccch---h
Q 039436 262 LYVSFGTTTAMSDEQIKE--LAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELP-KAYEDSVKDKGLVVRDWAPQ---L 335 (422)
Q Consensus 262 v~vs~Gs~~~~~~~~~~~--~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp-~~~~~~~~~~~~~~~~~~pq---~ 335 (422)
+||+-||....-...+.. +.+-.+....++|+..|..+ ..| . +..+.+|.-. +
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d------------~kpva---------gl~v~~F~~~~kiQ 60 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGD------------IKPVA---------GLRVYGFDKEEKIQ 60 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCC------------ccccc---------ccEEEeechHHHHH
Confidence 789999984321121111 22222233467888887643 122 2 3455555432 2
Q ss_pred hhhhcccccceeecCChhhHHHHHhcCCcEEccCccc--------chhhHHHHHHhhcCeEEEEe
Q 039436 336 EILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHS--------DQPRNTLLITHLLKLGLVMA 392 (422)
Q Consensus 336 ~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~--------Dq~~na~~~~~~~g~g~~~~ 392 (422)
.+-.. .+.+|+|||.||++.++..++|.+++|--- -|..-|..+++ .+.=+...
T Consensus 61 sli~d--arIVISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae-~~~vv~~s 122 (161)
T COG5017 61 SLIHD--ARIVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAE-INYVVACS 122 (161)
T ss_pred HHhhc--ceEEEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHh-cCceEEEc
Confidence 33444 559999999999999999999999999522 26777888877 56544443
No 94
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=97.14 E-value=0.48 Score=50.27 Aligned_cols=78 Identities=13% Similarity=0.095 Sum_probs=49.8
Q ss_pred CeEEeccc-ch---hhhhhc-c-cccceeec---CC-hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeec
Q 039436 325 GLVVRDWA-PQ---LEILAH-C-STGGFMSH---CG-WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADW 394 (422)
Q Consensus 325 ~~~~~~~~-pq---~~il~~-~-~~~~~i~H---gG-~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~ 394 (422)
++...++. +. ..++.+ + +.++||.- =| -.+++||+++|+|.|+.-.. -....+.+ -..|..++
T Consensus 620 ~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV~d-g~tGfLVd-- 692 (784)
T TIGR02470 620 QIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEIIQD-GVSGFHID-- 692 (784)
T ss_pred eEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHhcC-CCcEEEeC--
Confidence 56665653 32 234443 1 23567743 23 34899999999999986543 34455655 36788886
Q ss_pred cccccccCHHHHHHHHHHHh
Q 039436 395 ARRDEIVTSNVIENAVKRLM 414 (422)
Q Consensus 395 ~~~~~~~~~~~l~~av~~~l 414 (422)
.-+.+++++++.+++
T Consensus 693 -----p~D~eaLA~aL~~ll 707 (784)
T TIGR02470 693 -----PYHGEEAAEKIVDFF 707 (784)
T ss_pred -----CCCHHHHHHHHHHHH
Confidence 347788888888776
No 95
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.08 E-value=0.28 Score=47.75 Aligned_cols=131 Identities=20% Similarity=0.274 Sum_probs=78.2
Q ss_pred CcceEEecCCcc---cCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhcc-CCCeEEecccc-
Q 039436 259 NSVLYVSFGTTT---AMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVK-DKGLVVRDWAP- 333 (422)
Q Consensus 259 ~~vv~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~~~~~~p- 333 (422)
++.++|++=... ....+.+.+++++|.+.+.+++++..... +. ...+-+.+.+..+ .+++.+.+-++
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~-p~-------~~~i~~~i~~~~~~~~~v~l~~~l~~ 272 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNAD-AG-------SRIINEAIEEYVNEHPNFRLFKSLGQ 272 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCC-CC-------chHHHHHHHHHhcCCCCEEEECCCCh
Confidence 467778775432 34467899999999887766655442221 00 0001111222121 34777776554
Q ss_pred --hhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHH
Q 039436 334 --QLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVK 411 (422)
Q Consensus 334 --q~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~ 411 (422)
...++.+ ++++|+.++.+- .||.+.|+|.|.+- +.+. -+ + .|..+.+- ..++++|.++++
T Consensus 273 ~~~l~Ll~~--a~~vitdSSggi-~EA~~lg~Pvv~l~---~R~e---~~-~-~g~nvl~v-------g~~~~~I~~a~~ 334 (365)
T TIGR03568 273 ERYLSLLKN--ADAVIGNSSSGI-IEAPSFGVPTINIG---TRQK---GR-L-RADSVIDV-------DPDKEEIVKAIE 334 (365)
T ss_pred HHHHHHHHh--CCEEEEcChhHH-HhhhhcCCCEEeec---CCch---hh-h-hcCeEEEe-------CCCHHHHHHHHH
Confidence 4456767 779999986655 99999999999773 3111 11 2 24333322 357899999998
Q ss_pred HHhc
Q 039436 412 RLMA 415 (422)
Q Consensus 412 ~~l~ 415 (422)
+++.
T Consensus 335 ~~~~ 338 (365)
T TIGR03568 335 KLLD 338 (365)
T ss_pred HHhC
Confidence 8554
No 96
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.06 E-value=0.0088 Score=59.16 Aligned_cols=136 Identities=15% Similarity=0.218 Sum_probs=83.1
Q ss_pred cceEEecCCcccC-cHHHHHHHHHHHhhCC--CeeEEEEecCCCCCccccchhcccCChhhHhh----ccCCCeEEeccc
Q 039436 260 SVLYVSFGTTTAM-SDEQIKELAVGLKQSN--QKFIWVLRDADRGDVFNGEVRRAELPKAYEDS----VKDKGLVVRDWA 332 (422)
Q Consensus 260 ~vv~vs~Gs~~~~-~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~----~~~~~~~~~~~~ 332 (422)
...++++|..... ..+.+.+.+..+.+.+ ..+.|++-+... .-+.+.+. ....++...+|+
T Consensus 230 ~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~------------~~~~l~~~~~~~~~~~~V~f~G~v 297 (407)
T cd04946 230 TLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGP------------LEDTLKELAESKPENISVNFTGEL 297 (407)
T ss_pred CEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCch------------HHHHHHHHHHhcCCCceEEEecCC
Confidence 3456677877532 3444444444443332 356665443210 11122211 224468888999
Q ss_pred chhhhh---hcccccceeecCC----hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHH
Q 039436 333 PQLEIL---AHCSTGGFMSHCG----WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNV 405 (422)
Q Consensus 333 pq~~il---~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~ 405 (422)
++.++. ....+++||...- -++++||+++|+|+|+-... .....+.+ -+.|..+. ..-+.++
T Consensus 298 ~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vg----g~~e~i~~-~~~G~l~~------~~~~~~~ 366 (407)
T cd04946 298 SNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVG----GTPEIVDN-GGNGLLLS------KDPTPNE 366 (407)
T ss_pred ChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCC----CcHHHhcC-CCcEEEeC------CCCCHHH
Confidence 987544 4445677876553 46899999999999986533 34556655 34888775 1347899
Q ss_pred HHHHHHHHhcCCc
Q 039436 406 IENAVKRLMASKE 418 (422)
Q Consensus 406 l~~av~~~l~~~~ 418 (422)
+.++++++++|++
T Consensus 367 la~~I~~ll~~~~ 379 (407)
T cd04946 367 LVSSLSKFIDNEE 379 (407)
T ss_pred HHHHHHHHHhCHH
Confidence 9999999998654
No 97
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=97.06 E-value=0.00059 Score=52.34 Aligned_cols=66 Identities=24% Similarity=0.385 Sum_probs=50.9
Q ss_pred CCCccccHHHhhcccCCcceEEecCCcccC---c--HHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCCh
Q 039436 243 SNGRHFCLEWLDKQEKNSVLYVSFGTTTAM---S--DEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPK 315 (422)
Q Consensus 243 ~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~---~--~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~ 315 (422)
++....+..||.+.+.++.|+||+||.... . ...+..+++++++.+..+|.++....... .+.+|+
T Consensus 24 yNG~~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~~-------lg~lP~ 94 (97)
T PF06722_consen 24 YNGPAVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRAE-------LGELPD 94 (97)
T ss_dssp --SSEEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCGG-------CCS-TT
T ss_pred CCCCCCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHHh-------hCCCCC
Confidence 356688899999988899999999998653 2 24788899999999999999988765332 455666
No 98
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.98 E-value=0.4 Score=46.51 Aligned_cols=80 Identities=14% Similarity=0.148 Sum_probs=53.6
Q ss_pred CeEEecccc-hhhhhhcccccceee--c--CChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecccccc
Q 039436 325 GLVVRDWAP-QLEILAHCSTGGFMS--H--CGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDE 399 (422)
Q Consensus 325 ~~~~~~~~p-q~~il~~~~~~~~i~--H--gG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~ 399 (422)
++.+.++.. -..++.. ++++|. + |--++++||+++|+|+|+-...+ +...+.+ -..|..++
T Consensus 256 ~v~~~g~~~~~~~~~~~--adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~-~~~g~~~~------- 321 (374)
T TIGR03088 256 LVWLPGERDDVPALMQA--LDLFVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQH-GVTGALVP------- 321 (374)
T ss_pred eEEEcCCcCCHHHHHHh--cCEEEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcC-CCceEEeC-------
Confidence 344444432 3456666 667773 2 33569999999999999976533 4445544 35677775
Q ss_pred ccCHHHHHHHHHHHhcCCc
Q 039436 400 IVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 400 ~~~~~~l~~av~~~l~~~~ 418 (422)
.-+.+++.+++.+++++++
T Consensus 322 ~~d~~~la~~i~~l~~~~~ 340 (374)
T TIGR03088 322 PGDAVALARALQPYVSDPA 340 (374)
T ss_pred CCCHHHHHHHHHHHHhCHH
Confidence 3478899999999988753
No 99
>PLN02501 digalactosyldiacylglycerol synthase
Probab=96.97 E-value=0.018 Score=59.37 Aligned_cols=76 Identities=18% Similarity=0.103 Sum_probs=50.5
Q ss_pred eEEecccchh-hhhhcccccceeecC---C-hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccc
Q 039436 326 LVVRDWAPQL-EILAHCSTGGFMSHC---G-WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEI 400 (422)
Q Consensus 326 ~~~~~~~pq~-~il~~~~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~ 400 (422)
+.+.++.++. .++.. .++||.-+ | -++++||+++|+|.|+.-.-+... +.+ -+.|. +.
T Consensus 603 V~FLG~~dd~~~lyas--aDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~-g~nGl-l~-------- 665 (794)
T PLN02501 603 LNFLKGRDHADDSLHG--YKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRS-FPNCL-TY-------- 665 (794)
T ss_pred EEecCCCCCHHHHHHh--CCEEEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eee-cCCeE-ec--------
Confidence 4555666654 37766 77887643 2 468999999999999987654221 222 12232 21
Q ss_pred cCHHHHHHHHHHHhcCCc
Q 039436 401 VTSNVIENAVKRLMASKE 418 (422)
Q Consensus 401 ~~~~~l~~av~~~l~~~~ 418 (422)
-+.+++.+++.++|.++.
T Consensus 666 ~D~EafAeAI~~LLsd~~ 683 (794)
T PLN02501 666 KTSEDFVAKVKEALANEP 683 (794)
T ss_pred CCHHHHHHHHHHHHhCch
Confidence 268999999999998764
No 100
>PLN02949 transferase, transferring glycosyl groups
Probab=96.89 E-value=0.42 Score=48.02 Aligned_cols=79 Identities=10% Similarity=0.093 Sum_probs=49.3
Q ss_pred CCeEEecccchhh---hhhcccccceee---cCChh-hHHHHHhcCCcEEccCcccchhhHHHHHHhh-cC-eEEEEeec
Q 039436 324 KGLVVRDWAPQLE---ILAHCSTGGFMS---HCGWN-SCMESITMGVPIVAWPMHSDQPRNTLLITHL-LK-LGLVMADW 394 (422)
Q Consensus 324 ~~~~~~~~~pq~~---il~~~~~~~~i~---HgG~~-s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~-~g-~g~~~~~~ 394 (422)
.++.+.+++|+.+ +|.. ++++|+ +=|+| ++.||+++|+|.|+....+-- ...+.+. -| .|...
T Consensus 335 ~~V~f~g~v~~~el~~ll~~--a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~---~eIV~~~~~g~tG~l~--- 406 (463)
T PLN02949 335 GDVEFHKNVSYRDLVRLLGG--AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPK---MDIVLDEDGQQTGFLA--- 406 (463)
T ss_pred CcEEEeCCCCHHHHHHHHHh--CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCc---ceeeecCCCCcccccC---
Confidence 4688889998776 4555 557763 22333 799999999999998654310 0011110 01 23222
Q ss_pred cccccccCHHHHHHHHHHHhcC
Q 039436 395 ARRDEIVTSNVIENAVKRLMAS 416 (422)
Q Consensus 395 ~~~~~~~~~~~l~~av~~~l~~ 416 (422)
-+.+++++++.+++++
T Consensus 407 ------~~~~~la~ai~~ll~~ 422 (463)
T PLN02949 407 ------TTVEEYADAILEVLRM 422 (463)
T ss_pred ------CCHHHHHHHHHHHHhC
Confidence 1788999999999874
No 101
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.89 E-value=0.2 Score=48.66 Aligned_cols=79 Identities=18% Similarity=0.192 Sum_probs=50.9
Q ss_pred CCeEEeccc--chhh---hhhcccccceeecCC----hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeec
Q 039436 324 KGLVVRDWA--PQLE---ILAHCSTGGFMSHCG----WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADW 394 (422)
Q Consensus 324 ~~~~~~~~~--pq~~---il~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~ 394 (422)
.++.+.++. ++.. +++. +++|+.-.- ..+++||+++|+|+|+....+ ....+.+ -..|...+
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~--ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~-~~~g~~~~-- 322 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRA--STVVLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIED-GETGFLVD-- 322 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHh--CeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhccc-CCceEEeC--
Confidence 356666775 4433 4444 778886442 349999999999999876432 2334444 35676553
Q ss_pred cccccccCHHHHHHHHHHHhcCCc
Q 039436 395 ARRDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 395 ~~~~~~~~~~~l~~av~~~l~~~~ 418 (422)
+.++++.++.+++.+++
T Consensus 323 -------~~~~~a~~i~~ll~~~~ 339 (372)
T cd03792 323 -------TVEEAAVRILYLLRDPE 339 (372)
T ss_pred -------CcHHHHHHHHHHHcCHH
Confidence 34567778888887654
No 102
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=96.83 E-value=0.0072 Score=58.23 Aligned_cols=125 Identities=14% Similarity=0.210 Sum_probs=81.2
Q ss_pred eEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhh---hh
Q 039436 262 LYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLE---IL 338 (422)
Q Consensus 262 v~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~---il 338 (422)
.++..|++.. ...+..++++++..+.+++++ |.+. ..+.+.+ ....++.+.+++|+.. ++
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~iv-G~g~-------------~~~~l~~-~~~~~V~~~g~~~~~~~~~~~ 259 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVI-GDGP-------------ELDRLRA-KAGPNVTFLGRVSDEELRDLY 259 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEE-ECCh-------------hHHHHHh-hcCCCEEEecCCCHHHHHHHH
Confidence 4455676653 234666777777777666543 4322 0122222 2345899999999865 56
Q ss_pred hcccccceee--cCCh-hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhc
Q 039436 339 AHCSTGGFMS--HCGW-NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMA 415 (422)
Q Consensus 339 ~~~~~~~~i~--HgG~-~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~ 415 (422)
.. ++++|. .-|+ .+++||+++|+|+|+....+ ....+.+ -+.|..++ .-+.++++++|.++++
T Consensus 260 ~~--ad~~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~-~~~G~~~~-------~~~~~~la~~i~~l~~ 325 (351)
T cd03804 260 AR--ARAFLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVID-GVTGILFE-------EQTVESLAAAVERFEK 325 (351)
T ss_pred Hh--CCEEEECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeC-CCCEEEeC-------CCCHHHHHHHHHHHHh
Confidence 56 666764 3343 36789999999999986533 3334544 36788876 3478899999999998
Q ss_pred CC
Q 039436 416 SK 417 (422)
Q Consensus 416 ~~ 417 (422)
|+
T Consensus 326 ~~ 327 (351)
T cd03804 326 NE 327 (351)
T ss_pred Cc
Confidence 87
No 103
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=96.83 E-value=0.087 Score=51.10 Aligned_cols=81 Identities=14% Similarity=0.231 Sum_probs=54.7
Q ss_pred CeEEecccchh-hhhhcccccceee--c--CChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecccccc
Q 039436 325 GLVVRDWAPQL-EILAHCSTGGFMS--H--CGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDE 399 (422)
Q Consensus 325 ~~~~~~~~pq~-~il~~~~~~~~i~--H--gG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~ 399 (422)
++.+.++.++. .++.. ++++|. + |...+++||+++|+|+|+..... .+...+.+ -..|..++
T Consensus 262 ~v~~~g~~~~~~~~~~~--ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~-~~~G~lv~------- 328 (372)
T cd04949 262 YVFLKGYTRDLDEVYQK--AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIED-GENGYLVP------- 328 (372)
T ss_pred eEEEcCCCCCHHHHHhh--hhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHccc-CCCceEeC-------
Confidence 56676665433 35666 555554 3 23458999999999999864431 13344544 46777776
Q ss_pred ccCHHHHHHHHHHHhcCCc
Q 039436 400 IVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 400 ~~~~~~l~~av~~~l~~~~ 418 (422)
.-+.+++.++|.+++.|++
T Consensus 329 ~~d~~~la~~i~~ll~~~~ 347 (372)
T cd04949 329 KGDIEALAEAIIELLNDPK 347 (372)
T ss_pred CCcHHHHHHHHHHHHcCHH
Confidence 3579999999999998763
No 104
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=96.82 E-value=0.065 Score=51.89 Aligned_cols=82 Identities=16% Similarity=0.160 Sum_probs=51.8
Q ss_pred chhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcc-cchhhHHHHHHhhcCeEEEEee--------ccccccccCH
Q 039436 333 PQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMH-SDQPRNTLLITHLLKLGLVMAD--------WARRDEIVTS 403 (422)
Q Consensus 333 pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~-~Dq~~na~~~~~~~g~g~~~~~--------~~~~~~~~~~ 403 (422)
.-..++.. +++.+.-+|- .++|+...|+|||++=-. .=.+..|+++.+ ..- +.+.+ .+--.+..|+
T Consensus 253 ~~~~~m~~--ad~al~~SGT-aTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk-~~~-isL~Niia~~~v~PEliQ~~~~~ 327 (373)
T PF02684_consen 253 ESYDAMAA--ADAALAASGT-ATLEAALLGVPMVVAYKVSPLTYFIAKRLVK-VKY-ISLPNIIAGREVVPELIQEDATP 327 (373)
T ss_pred chHHHHHh--CcchhhcCCH-HHHHHHHhCCCEEEEEcCcHHHHHHHHHhhc-CCE-eechhhhcCCCcchhhhcccCCH
Confidence 34446666 5677776665 478999999999987321 123455666654 221 11111 0111457899
Q ss_pred HHHHHHHHHHhcCCcc
Q 039436 404 NVIENAVKRLMASKEG 419 (422)
Q Consensus 404 ~~l~~av~~~l~~~~~ 419 (422)
+.|.+++.++|+|++.
T Consensus 328 ~~i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 328 ENIAAELLELLENPEK 343 (373)
T ss_pred HHHHHHHHHHhcCHHH
Confidence 9999999999998754
No 105
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=96.82 E-value=0.0043 Score=61.31 Aligned_cols=126 Identities=22% Similarity=0.331 Sum_probs=70.4
Q ss_pred cCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHh-hccCCCeEEecccchh
Q 039436 257 EKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYED-SVKDKGLVVRDWAPQL 335 (422)
Q Consensus 257 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~~~~~~~~pq~ 335 (422)
++..++|.||.+....+++.+.--++-|++.+...+|..+....+ ...+-..+.+ .++...+++.++.++.
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~--------~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ 353 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASG--------EARLRRRFAAHGVDPDRIIFSPVAPRE 353 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH--------HHHHHHHHHHTTS-GGGEEEEE---HH
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH--------HHHHHHHHHHcCCChhhEEEcCCCCHH
Confidence 456799999999999999999999999999999999988764311 0111111111 1123357777777765
Q ss_pred hhhh-ccccccee---ecCChhhHHHHHhcCCcEEccCccc-chhhHHHHHHhhcCeEEEE
Q 039436 336 EILA-HCSTGGFM---SHCGWNSCMESITMGVPIVAWPMHS-DQPRNTLLITHLLKLGLVM 391 (422)
Q Consensus 336 ~il~-~~~~~~~i---~HgG~~s~~eal~~GvP~v~~P~~~-Dq~~na~~~~~~~g~g~~~ 391 (422)
+-|. +..+++++ ..+|.+|++|||++|||+|.+|--. =...-+..+.. +|+.-.+
T Consensus 354 ehl~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~-lGl~ElI 413 (468)
T PF13844_consen 354 EHLRRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRA-LGLPELI 413 (468)
T ss_dssp HHHHHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHH-HT-GGGB
T ss_pred HHHHHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHH-cCCchhc
Confidence 5443 34477776 4568899999999999999998422 22333445544 6766444
No 106
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=96.76 E-value=0.016 Score=57.24 Aligned_cols=84 Identities=15% Similarity=0.235 Sum_probs=59.6
Q ss_pred CCCeEEecccchhhhhh-cccccceeec---------CCh-hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEE
Q 039436 323 DKGLVVRDWAPQLEILA-HCSTGGFMSH---------CGW-NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVM 391 (422)
Q Consensus 323 ~~~~~~~~~~pq~~il~-~~~~~~~i~H---------gG~-~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~ 391 (422)
..++.+.+|+|+.++.. ..++++||.- -|. ++++||+++|+|+|+....+ ....+.+ -..|..+
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~-~~~G~lv 352 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEA-DKSGWLV 352 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcC-CCceEEe
Confidence 34788889999876433 1337788753 244 57899999999999975433 3344544 3578777
Q ss_pred eeccccccccCHHHHHHHHHHHhc-CCc
Q 039436 392 ADWARRDEIVTSNVIENAVKRLMA-SKE 418 (422)
Q Consensus 392 ~~~~~~~~~~~~~~l~~av~~~l~-~~~ 418 (422)
+ .-+.++++++|.++++ |++
T Consensus 353 ~-------~~d~~~la~ai~~l~~~d~~ 373 (406)
T PRK15427 353 P-------ENDAQALAQRLAAFSQLDTD 373 (406)
T ss_pred C-------CCCHHHHHHHHHHHHhCCHH
Confidence 5 3478999999999998 764
No 107
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=96.60 E-value=0.0086 Score=48.90 Aligned_cols=126 Identities=18% Similarity=0.260 Sum_probs=63.6
Q ss_pred eEEecCCccc-CcHHHHHH-HHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccch-hhhh
Q 039436 262 LYVSFGTTTA-MSDEQIKE-LAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQ-LEIL 338 (422)
Q Consensus 262 v~vs~Gs~~~-~~~~~~~~-~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq-~~il 338 (422)
.++++|+... ...+.+.+ +++.+.+....+-+.+-+.. |+.+.+. ..+++.+.+|++. ..++
T Consensus 4 ~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~--------------~~~l~~~-~~~~v~~~g~~~e~~~~l 68 (135)
T PF13692_consen 4 YIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNG--------------PDELKRL-RRPNVRFHGFVEELPEIL 68 (135)
T ss_dssp EEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECES--------------S-HHCCH-HHCTEEEE-S-HHHHHHH
T ss_pred cccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCC--------------HHHHHHh-cCCCEEEcCCHHHHHHHH
Confidence 4456666643 34455555 66666543333333332221 1222222 2348899899852 2355
Q ss_pred hcccccceeecC--C-hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhc
Q 039436 339 AHCSTGGFMSHC--G-WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMA 415 (422)
Q Consensus 339 ~~~~~~~~i~Hg--G-~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~ 415 (422)
+.+.+.+..+.. | -+++.|++++|+|+|+.+.. ....++. .+.|..+. -+.+++.++++++++
T Consensus 69 ~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~~-~~~~~~~~--------~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 69 AAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVEE-DGCGVLVA--------NDPEELAEAIERLLN 134 (135)
T ss_dssp HC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE-T--------T-HHHHHHHHHHHHH
T ss_pred HhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhheee-cCCeEEEC--------CCHHHHHHHHHHHhc
Confidence 564444433321 2 48999999999999998661 2223333 47776663 289999999999987
Q ss_pred C
Q 039436 416 S 416 (422)
Q Consensus 416 ~ 416 (422)
|
T Consensus 135 d 135 (135)
T PF13692_consen 135 D 135 (135)
T ss_dssp -
T ss_pred C
Confidence 5
No 108
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.57 E-value=0.83 Score=44.50 Aligned_cols=77 Identities=16% Similarity=0.105 Sum_probs=50.4
Q ss_pred CCCeEEecccchhhh---hhcccccceee--------cCC-hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEE
Q 039436 323 DKGLVVRDWAPQLEI---LAHCSTGGFMS--------HCG-WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLV 390 (422)
Q Consensus 323 ~~~~~~~~~~pq~~i---l~~~~~~~~i~--------HgG-~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~ 390 (422)
..|+.+.+++|+.++ +.+ .+++|. .++ -+.++|++++|+|+|+.++ ...+.. .+ |..
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~--~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~~~-~~-~~~ 321 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAG--FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVRRY-ED-EVV 321 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHh--CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHHhh-cC-cEE
Confidence 458999999997775 444 455543 222 2458999999999998763 222222 23 333
Q ss_pred EeeccccccccCHHHHHHHHHHHhcCC
Q 039436 391 MADWARRDEIVTSNVIENAVKRLMASK 417 (422)
Q Consensus 391 ~~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (422)
+. . -+.+++.++|++++.++
T Consensus 322 ~~-----~--~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 322 LI-----A--DDPEEFVAAIEKALLED 341 (373)
T ss_pred Ee-----C--CCHHHHHHHHHHHHhcC
Confidence 33 1 27999999999977643
No 109
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=96.57 E-value=0.022 Score=48.64 Aligned_cols=138 Identities=17% Similarity=0.228 Sum_probs=83.0
Q ss_pred CCcceEEecCCccc-CcHHHHHHHHHHHhh--CCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccch
Q 039436 258 KNSVLYVSFGTTTA-MSDEQIKELAVGLKQ--SNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQ 334 (422)
Q Consensus 258 ~~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq 334 (422)
....+++.+|+... ...+.+.+++.-+.. ...-.++.+|.... ...+-.......-..++.+.++.++
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~ 83 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY---------KKELKNLIEKLNLKENIIFLGYVPD 83 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH---------HHHHHHHHHHTTCGTTEEEEESHSH
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc---------ccccccccccccccccccccccccc
Confidence 34557777888754 334455554444432 23334444552210 0001111111112347778888873
Q ss_pred ---hhhhhcccccceeec----CChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHH
Q 039436 335 ---LEILAHCSTGGFMSH----CGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIE 407 (422)
Q Consensus 335 ---~~il~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~ 407 (422)
..++.. ++++|+. +...+++||+++|+|+|+. |...+...+.+ .+.|..++ .-+.+++.
T Consensus 84 ~~l~~~~~~--~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~-~~~g~~~~-------~~~~~~l~ 149 (172)
T PF00534_consen 84 DELDELYKS--SDIFVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIIND-GVNGFLFD-------PNDIEELA 149 (172)
T ss_dssp HHHHHHHHH--TSEEEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGT-TTSEEEES-------TTSHHHHH
T ss_pred ccccccccc--ceeccccccccccccccccccccccceeec----cccCCceeecc-ccceEEeC-------CCCHHHHH
Confidence 345666 7788877 5567999999999999975 45556667766 56799887 23999999
Q ss_pred HHHHHHhcCCc
Q 039436 408 NAVKRLMASKE 418 (422)
Q Consensus 408 ~av~~~l~~~~ 418 (422)
++|.+++.+++
T Consensus 150 ~~i~~~l~~~~ 160 (172)
T PF00534_consen 150 DAIEKLLNDPE 160 (172)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHCCHH
Confidence 99999998764
No 110
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=96.46 E-value=0.025 Score=54.87 Aligned_cols=136 Identities=14% Similarity=0.235 Sum_probs=79.7
Q ss_pred cceEEecCCcccCcHHHHHHHHHHHhhCC--CeeEEEEecCCCCCccccchhcccCChhhHhhcc-CCCeEEecccch--
Q 039436 260 SVLYVSFGTTTAMSDEQIKELAVGLKQSN--QKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVK-DKGLVVRDWAPQ-- 334 (422)
Q Consensus 260 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~~~~~~pq-- 334 (422)
..+++..|.........+..+++++.... .+++ .+|.+.. ...+ ..+.+..+ +.++.+.+|+++
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~-ivG~g~~---------~~~l-~~~~~~~~l~~~v~f~G~~~~~~ 248 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLH-IIGDGSD---------FEKC-KAYSRELGIEQRIIWHGWQSQPW 248 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEE-EEeCCcc---------HHHH-HHHHHHcCCCCeEEEecccCCcH
Confidence 34667778765323344666777776653 3444 3443320 0111 11111111 347888888754
Q ss_pred hhhhh-cccccceeecC----ChhhHHHHHhcCCcEEccC-cccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHH
Q 039436 335 LEILA-HCSTGGFMSHC----GWNSCMESITMGVPIVAWP-MHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIEN 408 (422)
Q Consensus 335 ~~il~-~~~~~~~i~Hg----G~~s~~eal~~GvP~v~~P-~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~ 408 (422)
..+-. ..+++++|... --++++||+++|+|+|+.- ..+ ....+.+ -..|..++ .-+.+++.+
T Consensus 249 ~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~-~~~G~lv~-------~~d~~~la~ 316 (359)
T PRK09922 249 EVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKP-GLNGELYT-------PGNIDEFVG 316 (359)
T ss_pred HHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccC-CCceEEEC-------CCCHHHHHH
Confidence 22211 12356777532 2579999999999999875 322 2234444 35687775 348999999
Q ss_pred HHHHHhcCCc
Q 039436 409 AVKRLMASKE 418 (422)
Q Consensus 409 av~~~l~~~~ 418 (422)
+|.++++|++
T Consensus 317 ~i~~l~~~~~ 326 (359)
T PRK09922 317 KLNKVISGEV 326 (359)
T ss_pred HHHHHHhCcc
Confidence 9999999876
No 111
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.36 E-value=0.38 Score=46.14 Aligned_cols=133 Identities=11% Similarity=0.157 Sum_probs=84.7
Q ss_pred CcceEEecCCcccCcHHHHHHHHHHHh----hC-CCeeEEEEecCCCCCccccchhcccCChhhHhhccCC-CeEEe---
Q 039436 259 NSVLYVSFGTTTAMSDEQIKELAVGLK----QS-NQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDK-GLVVR--- 329 (422)
Q Consensus 259 ~~vv~vs~Gs~~~~~~~~~~~~~~~l~----~~-~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~-~~~~~--- 329 (422)
+..+.|++=-..+.. +.+.++.+++. .. +..+|.-+.... . ...+. ..+.++. ++.+.
T Consensus 204 ~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~~--~--------v~e~~--~~~L~~~~~v~li~pl 270 (383)
T COG0381 204 KKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHPRP--R--------VRELV--LKRLKNVERVKLIDPL 270 (383)
T ss_pred CcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCCCh--h--------hhHHH--HHHhCCCCcEEEeCCc
Confidence 457888765554444 44555555543 34 445555444432 1 00111 1233322 45544
Q ss_pred cccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHH
Q 039436 330 DWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENA 409 (422)
Q Consensus 330 ~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~a 409 (422)
+|.+...++.+ +.+++|-.|.. .-||-..|+|.+++=...+++. ++ + .|.-+.+ ..+.+.|.++
T Consensus 271 ~~~~f~~L~~~--a~~iltDSGgi-qEEAp~lg~Pvl~lR~~TERPE---~v-~-agt~~lv--------g~~~~~i~~~ 334 (383)
T COG0381 271 GYLDFHNLMKN--AFLILTDSGGI-QEEAPSLGKPVLVLRDTTERPE---GV-E-AGTNILV--------GTDEENILDA 334 (383)
T ss_pred chHHHHHHHHh--ceEEEecCCch-hhhHHhcCCcEEeeccCCCCcc---ce-e-cCceEEe--------CccHHHHHHH
Confidence 46778888988 67999988753 6789999999999988888887 33 3 4665555 3577999999
Q ss_pred HHHHhcCCccc
Q 039436 410 VKRLMASKEGD 420 (422)
Q Consensus 410 v~~~l~~~~~~ 420 (422)
+.+++++++..
T Consensus 335 ~~~ll~~~~~~ 345 (383)
T COG0381 335 ATELLEDEEFY 345 (383)
T ss_pred HHHHhhChHHH
Confidence 99999986543
No 112
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=96.24 E-value=0.053 Score=53.10 Aligned_cols=82 Identities=18% Similarity=0.186 Sum_probs=58.7
Q ss_pred CCeEEecccchhhh---hhcccccceeecCCh-----hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecc
Q 039436 324 KGLVVRDWAPQLEI---LAHCSTGGFMSHCGW-----NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWA 395 (422)
Q Consensus 324 ~~~~~~~~~pq~~i---l~~~~~~~~i~HgG~-----~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~ 395 (422)
.++.+.+++|+.++ ++. +++||....| .+++||+++|+|+|+....+ +...+.+ -..|..+.
T Consensus 257 ~~v~~~G~~~~~~l~~~~~~--aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~-~~~G~~l~--- 326 (380)
T PRK15484 257 DRCIMLGGQPPEKMHNYYPL--ADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLE-GITGYHLA--- 326 (380)
T ss_pred CcEEEeCCCCHHHHHHHHHh--CCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhccc-CCceEEEe---
Confidence 36778899987654 555 7788864433 57889999999999976532 3445544 35677553
Q ss_pred ccccccCHHHHHHHHHHHhcCCc
Q 039436 396 RRDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~~~~ 418 (422)
...+.+++.+++.++++|++
T Consensus 327 ---~~~d~~~la~~I~~ll~d~~ 346 (380)
T PRK15484 327 ---EPMTSDSIISDINRTLADPE 346 (380)
T ss_pred ---CCCCHHHHHHHHHHHHcCHH
Confidence 13579999999999998875
No 113
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=96.04 E-value=1.3 Score=45.01 Aligned_cols=88 Identities=14% Similarity=0.206 Sum_probs=56.4
Q ss_pred CCeEEecccchhhhhhcccccceee---cCCh-hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecccccc
Q 039436 324 KGLVVRDWAPQLEILAHCSTGGFMS---HCGW-NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDE 399 (422)
Q Consensus 324 ~~~~~~~~~pq~~il~~~~~~~~i~---HgG~-~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~ 399 (422)
.++...++.+...++.. +++||. .=|+ .+++||+++|+|+|+.-..+ .+...+.+ -..|..++...+...
T Consensus 376 ~~V~f~G~~~~~~~~~~--adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~-g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 376 DYIHLKGHRNLSEVYKD--YELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIED-NKNGYLIPIDEEEDD 449 (500)
T ss_pred CeEEEcCCCCHHHHHHh--CCEEEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccC-CCCEEEEeCCccccc
Confidence 46777788888888887 667775 3343 58999999999999975431 13344544 346776651000000
Q ss_pred ccC-HHHHHHHHHHHhcCC
Q 039436 400 IVT-SNVIENAVKRLMASK 417 (422)
Q Consensus 400 ~~~-~~~l~~av~~~l~~~ 417 (422)
.-+ .++++++|.++++++
T Consensus 450 ~~~~~~~la~~I~~ll~~~ 468 (500)
T TIGR02918 450 EDQIITALAEKIVEYFNSN 468 (500)
T ss_pred hhHHHHHHHHHHHHHhChH
Confidence 112 788999999988543
No 114
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=95.93 E-value=0.089 Score=50.51 Aligned_cols=80 Identities=15% Similarity=0.172 Sum_probs=57.1
Q ss_pred CeEEecccc-hh---hhhhcccccceeecCC----hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccc
Q 039436 325 GLVVRDWAP-QL---EILAHCSTGGFMSHCG----WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWAR 396 (422)
Q Consensus 325 ~~~~~~~~p-q~---~il~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~ 396 (422)
++...+|++ +. .++.. ++++|.-.. .++++||+++|+|+|+.... .....+.+ -+.|..++
T Consensus 245 ~v~~~g~~~~~~~~~~~~~~--ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~~~-~~~g~~~~---- 313 (365)
T cd03825 245 PVHYLGSLNDDESLALIYSA--ADVFVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIVDH-GVTGYLAK---- 313 (365)
T ss_pred ceEecCCcCCHHHHHHHHHh--CCEEEeccccccccHHHHHHHhcCCCEEEecCC----CChhheeC-CCceEEeC----
Confidence 677789998 43 34655 778887543 47999999999999986543 22233434 35677665
Q ss_pred cccccCHHHHHHHHHHHhcCCc
Q 039436 397 RDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 397 ~~~~~~~~~l~~av~~~l~~~~ 418 (422)
..+.+++.+++.+++++++
T Consensus 314 ---~~~~~~~~~~l~~l~~~~~ 332 (365)
T cd03825 314 ---PGDPEDLAEGIEWLLADPD 332 (365)
T ss_pred ---CCCHHHHHHHHHHHHhCHH
Confidence 3478899999999998764
No 115
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=95.24 E-value=0.12 Score=50.48 Aligned_cols=82 Identities=18% Similarity=0.216 Sum_probs=52.7
Q ss_pred ecccchhh---hhhcccccceeecC---C-hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecccccccc
Q 039436 329 RDWAPQLE---ILAHCSTGGFMSHC---G-WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIV 401 (422)
Q Consensus 329 ~~~~pq~~---il~~~~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~ 401 (422)
.+++++.. ++.+ +++||.=. | ..+++||+++|+|+|+.... .+...+.+ -+.|..++.. +....-
T Consensus 266 ~~~~~~~~~~~~~~~--aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~-~~~G~~~~~~-~~~~~~ 337 (388)
T TIGR02149 266 NKMLPKEELVELLSN--AEVFVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVD-GETGFLVPPD-NSDADG 337 (388)
T ss_pred cCCCCHHHHHHHHHh--CCEEEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhC-CCceEEcCCC-CCcccc
Confidence 46777654 4555 77887532 2 35779999999999987543 34555655 4678887620 000111
Q ss_pred CHHHHHHHHHHHhcCCc
Q 039436 402 TSNVIENAVKRLMASKE 418 (422)
Q Consensus 402 ~~~~l~~av~~~l~~~~ 418 (422)
..+++.+++.++++|++
T Consensus 338 ~~~~l~~~i~~l~~~~~ 354 (388)
T TIGR02149 338 FQAELAKAINILLADPE 354 (388)
T ss_pred hHHHHHHHHHHHHhCHH
Confidence 23899999999988754
No 116
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=95.09 E-value=0.18 Score=50.35 Aligned_cols=123 Identities=15% Similarity=0.178 Sum_probs=82.5
Q ss_pred cCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhH---hh--ccCCCeEEecc
Q 039436 257 EKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYE---DS--VKDKGLVVRDW 331 (422)
Q Consensus 257 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~---~~--~~~~~~~~~~~ 331 (422)
|+.-+||+||+......++.+..=++=|+..+-.++|..++++.+. +-..+. ++ ++...+++.+-
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~----------~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAE----------INARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHH----------HHHHHHHHHHHcCCChhheeecCC
Confidence 4567999999999999999888877888888899999888754221 111221 11 22335666666
Q ss_pred cchhhhhhc-ccccceee---cCChhhHHHHHhcCCcEEccCcccchhh--HHHHHHhhcCeEEEE
Q 039436 332 APQLEILAH-CSTGGFMS---HCGWNSCMESITMGVPIVAWPMHSDQPR--NTLLITHLLKLGLVM 391 (422)
Q Consensus 332 ~pq~~il~~-~~~~~~i~---HgG~~s~~eal~~GvP~v~~P~~~Dq~~--na~~~~~~~g~g~~~ 391 (422)
.|...-++. .-+++|+- -||.-|+.|+|..|||+|.+ .++||- |+.-+...+|+-..+
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~--~G~~FasR~~~si~~~agi~e~v 560 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPYGGHTTASDALWMGVPVLTR--VGEQFASRNGASIATNAGIPELV 560 (620)
T ss_pred CCCHHHHHhhchhheeeecccCCCccchHHHHHhcCceeee--ccHHHHHhhhHHHHHhcCCchhh
Confidence 665543332 23556664 58999999999999999998 477753 444444335554444
No 117
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=94.26 E-value=0.089 Score=43.65 Aligned_cols=95 Identities=16% Similarity=0.103 Sum_probs=44.4
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCcchhhHHHh
Q 039436 13 LLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACKFPSHIIPCCEAS 92 (422)
Q Consensus 13 ~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (422)
+..|+++|.++||+|++++.......-+.. ..++++..++++... . . ....
T Consensus 7 ~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~------~----~----~~~~--- 57 (160)
T PF13579_consen 7 VRELARALAARGHEVTVVTPQPDPEDDEEE------------EDGVRVHRLPLPRRP------W----P----LRLL--- 57 (160)
T ss_dssp HHHHHHHHHHTT-EEEEEEE---GGG-SEE------------ETTEEEEEE--S-SS------S----G----GGHC---
T ss_pred HHHHHHHHHHCCCEEEEEecCCCCcccccc------------cCCceEEeccCCccc------h----h----hhhH---
Confidence 578999999999999999976544322111 137888887633211 0 0 0000
Q ss_pred hhchHHHHHHHHHhccCCCeeEEEEcCCc-hhHHHHHh-hCCCCceEEee
Q 039436 93 KHLRHPLATLLNTLSATARRVVVIHDSLM-ASVIQDVC-LIPNAESYTFH 140 (422)
Q Consensus 93 ~~~~~~~~~~l~~l~~~~~~d~VI~D~~~-~~~~~vA~-~l~GIP~v~~~ 140 (422)
.....+..++ .....++|+|...... .+...+++ .. |+|.+...
T Consensus 58 -~~~~~~~~~l--~~~~~~~Dvv~~~~~~~~~~~~~~~~~~-~~p~v~~~ 103 (160)
T PF13579_consen 58 -RFLRRLRRLL--AARRERPDVVHAHSPTAGLVAALARRRR-GIPLVVTV 103 (160)
T ss_dssp -CHHHHHHHHC--HHCT---SEEEEEHHHHHHHHHHHHHHH-T--EEEE-
T ss_pred -HHHHHHHHHH--hhhccCCeEEEecccchhHHHHHHHHcc-CCcEEEEE
Confidence 0112333333 1233488977654432 23444555 78 99998654
No 118
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=94.21 E-value=0.21 Score=50.30 Aligned_cols=122 Identities=20% Similarity=0.366 Sum_probs=81.3
Q ss_pred cCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHh---h--ccCCCeEEecc
Q 039436 257 EKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYED---S--VKDKGLVVRDW 331 (422)
Q Consensus 257 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~---~--~~~~~~~~~~~ 331 (422)
++.-|||.+|--...++++.++.-++-|.+.+..++|.++.+..+. ..|.. + ..++.+++.+-
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge------------~rf~ty~~~~Gl~p~riifs~v 823 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE------------QRFRTYAEQLGLEPDRIIFSPV 823 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch------------HHHHHHHHHhCCCccceeeccc
Confidence 4457899999988999999999999999999999999999875332 11111 0 11224444333
Q ss_pred cc-----hhhhhhcccccceeecCChhhHHHHHhcCCcEEccCccc-chhhHHHHHHhhcCeEEEEe
Q 039436 332 AP-----QLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHS-DQPRNTLLITHLLKLGLVMA 392 (422)
Q Consensus 332 ~p-----q~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~-Dq~~na~~~~~~~g~g~~~~ 392 (422)
+. +...|..=..+-+++. |.-|.+|.+++|||||.+|.-. -...-+..+.. +|+|-.+.
T Consensus 824 a~k~eHvrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~-~Gl~hlia 888 (966)
T KOG4626|consen 824 AAKEEHVRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTA-LGLGHLIA 888 (966)
T ss_pred cchHHHHHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHH-cccHHHHh
Confidence 32 2233433334445555 7889999999999999999743 23333445555 78887554
No 119
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=94.21 E-value=0.56 Score=47.39 Aligned_cols=82 Identities=20% Similarity=0.231 Sum_probs=56.5
Q ss_pred CCeEEecccchhhhhhcccccceeecC----ChhhHHHHHhcCCcEEccCcccchhhHHHHHHhh----cC-eEEEEeec
Q 039436 324 KGLVVRDWAPQLEILAHCSTGGFMSHC----GWNSCMESITMGVPIVAWPMHSDQPRNTLLITHL----LK-LGLVMADW 394 (422)
Q Consensus 324 ~~~~~~~~~pq~~il~~~~~~~~i~Hg----G~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~----~g-~g~~~~~~ 394 (422)
.++.+.+...-..++.. ++++|.-. --++++||+++|+|+|+-.. ......+.+. +| .|..++
T Consensus 354 ~~V~f~G~~~v~~~l~~--aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv~~~~~~~~g~~G~lv~-- 425 (475)
T cd03813 354 DNVKFTGFQNVKEYLPK--LDVLVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELIEGADDEALGPAGEVVP-- 425 (475)
T ss_pred CeEEEcCCccHHHHHHh--CCEEEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHhcCCcccccCCceEEEC--
Confidence 46777775555667766 77777543 34689999999999999543 3333444331 12 677775
Q ss_pred cccccccCHHHHHHHHHHHhcCCc
Q 039436 395 ARRDEIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 395 ~~~~~~~~~~~l~~av~~~l~~~~ 418 (422)
.-+.+++.+++.++++|++
T Consensus 426 -----~~d~~~la~ai~~ll~~~~ 444 (475)
T cd03813 426 -----PADPEALARAILRLLKDPE 444 (475)
T ss_pred -----CCCHHHHHHHHHHHhcCHH
Confidence 3578999999999998764
No 120
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=93.68 E-value=0.82 Score=39.04 Aligned_cols=95 Identities=13% Similarity=0.069 Sum_probs=54.4
Q ss_pred hCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCcchhhHHHhhhchHHHHH
Q 039436 22 SYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACKFPSHIIPCCEASKHLRHPLAT 101 (422)
Q Consensus 22 ~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (422)
++||+|+|++........ +|++...+..+.. . ... .+.+..-++..........+
T Consensus 1 q~gh~v~fl~~~~~~~~~----------------~GV~~~~y~~~~~------~--~~~-~~~~~~~~e~~~~rg~av~~ 55 (171)
T PF12000_consen 1 QRGHEVVFLTERKRPPIP----------------PGVRVVRYRPPRG------P--TPG-THPYVRDFEAAVLRGQAVAR 55 (171)
T ss_pred CCCCEEEEEecCCCCCCC----------------CCcEEEEeCCCCC------C--CCC-CCcccccHHHHHHHHHHHHH
Confidence 579999999955443222 2778777741111 0 111 11111222221112223333
Q ss_pred HHHHhcc-CCCeeEEEEcCCchhHHHHHhhCCCCceEEeec
Q 039436 102 LLNTLSA-TARRVVVIHDSLMASVIQDVCLIPNAESYTFHS 141 (422)
Q Consensus 102 ~l~~l~~-~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~ 141 (422)
.+.+|.+ ...||+||...-+..++.+-+.+|++|.+.++=
T Consensus 56 a~~~L~~~Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 56 AARQLRAQGFVPDVIIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred HHHHHHHcCCCCCEEEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 4444433 457999999988777888888899999987753
No 121
>PHA01633 putative glycosyl transferase group 1
Probab=91.62 E-value=4.5 Score=38.75 Aligned_cols=82 Identities=13% Similarity=0.065 Sum_probs=53.1
Q ss_pred CeEEe---cccchh---hhhhcccccceeec---CCh-hhHHHHHhcCCcEEccCc------ccch------hhHHHHHH
Q 039436 325 GLVVR---DWAPQL---EILAHCSTGGFMSH---CGW-NSCMESITMGVPIVAWPM------HSDQ------PRNTLLIT 382 (422)
Q Consensus 325 ~~~~~---~~~pq~---~il~~~~~~~~i~H---gG~-~s~~eal~~GvP~v~~P~------~~Dq------~~na~~~~ 382 (422)
++.+. +++++. .++.. +++||.- =|+ ++++||+++|+|.|+--. .+|+ ..+.....
T Consensus 202 ~V~f~g~~G~~~~~dl~~~y~~--aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~ 279 (335)
T PHA01633 202 NVHFVAEFGHNSREYIFAFYGA--MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYY 279 (335)
T ss_pred cEEEEecCCCCCHHHHHHHHHh--CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhc
Confidence 66666 455554 34555 7788864 243 478999999999998633 2332 23333333
Q ss_pred h-hcCeEEEEeeccccccccCHHHHHHHHHHHhc
Q 039436 383 H-LLKLGLVMADWARRDEIVTSNVIENAVKRLMA 415 (422)
Q Consensus 383 ~-~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~ 415 (422)
+ .-|.|..++ ..+++++++++++++.
T Consensus 280 ~~~~g~g~~~~-------~~d~~~la~ai~~~~~ 306 (335)
T PHA01633 280 DKEHGQKWKIH-------KFQIEDMANAIILAFE 306 (335)
T ss_pred CcccCceeeec-------CCCHHHHHHHHHHHHh
Confidence 2 136666665 5799999999999855
No 122
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=91.31 E-value=2.3 Score=42.19 Aligned_cols=154 Identities=12% Similarity=0.157 Sum_probs=85.7
Q ss_pred cHHHhhcccCCcceEEecCCccc----------CcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhH
Q 039436 249 CLEWLDKQEKNSVLYVSFGTTTA----------MSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYE 318 (422)
Q Consensus 249 ~~~wl~~~~~~~vv~vs~Gs~~~----------~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~ 318 (422)
+..|+...+.+++|-|+.-.... ...+.+.++++.|.+.|.++++.-.-..... .++ +....-..+.
T Consensus 224 ~~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~--~~~-dD~~~~~~l~ 300 (426)
T PRK10017 224 VQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDS--YNK-DDRMVALNLR 300 (426)
T ss_pred hhhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccC--CCC-chHHHHHHHH
Confidence 34566543345678777654431 1223445566666566888776543211000 000 0001112333
Q ss_pred hhccCC-C-eEEe-cccchh--hhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEE-Ee
Q 039436 319 DSVKDK-G-LVVR-DWAPQL--EILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLV-MA 392 (422)
Q Consensus 319 ~~~~~~-~-~~~~-~~~pq~--~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~-~~ 392 (422)
+....+ + .++. ++-+.+ .++++ ++++|.. =.-++.-|+..|||.+.++. |+...+ .+.+ +|.... ++
T Consensus 301 ~~~~~~~~~~vi~~~~~~~e~~~iIs~--~dl~ig~-RlHa~I~a~~~gvP~i~i~Y--~~K~~~-~~~~-lg~~~~~~~ 373 (426)
T PRK10017 301 QHVSDPARYHVVMDELNDLEMGKILGA--CELTVGT-RLHSAIISMNFGTPAIAINY--EHKSAG-IMQQ-LGLPEMAID 373 (426)
T ss_pred HhcccccceeEecCCCChHHHHHHHhh--CCEEEEe-cchHHHHHHHcCCCEEEeee--hHHHHH-HHHH-cCCccEEec
Confidence 443322 1 2222 233443 67777 7788864 34467778889999999987 443333 4456 788765 34
Q ss_pred eccccccccCHHHHHHHHHHHhcCC
Q 039436 393 DWARRDEIVTSNVIENAVKRLMASK 417 (422)
Q Consensus 393 ~~~~~~~~~~~~~l~~av~~~l~~~ 417 (422)
.+.++.++|.+.++++++|.
T Consensus 374 -----~~~l~~~~Li~~v~~~~~~r 393 (426)
T PRK10017 374 -----IRHLLDGSLQAMVADTLGQL 393 (426)
T ss_pred -----hhhCCHHHHHHHHHHHHhCH
Confidence 56788999999999999864
No 123
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=88.88 E-value=1.8 Score=37.96 Aligned_cols=51 Identities=16% Similarity=0.149 Sum_probs=36.3
Q ss_pred CCCeEEecccchhhhhh-c-ccccceeecCC----hhhHHHHHhcCCcEEccCcccc
Q 039436 323 DKGLVVRDWAPQLEILA-H-CSTGGFMSHCG----WNSCMESITMGVPIVAWPMHSD 373 (422)
Q Consensus 323 ~~~~~~~~~~pq~~il~-~-~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~D 373 (422)
..++.+.+++++...+. - .+++++++-.. -++++||+++|+|+|+-...+.
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~ 216 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGP 216 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCc
Confidence 44788888863322221 1 23778888776 7899999999999999877543
No 124
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=88.66 E-value=2.8 Score=42.31 Aligned_cols=132 Identities=11% Similarity=0.050 Sum_probs=72.3
Q ss_pred ceEEecCCccc-CcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhH---hhccCCCeEEecccchhh
Q 039436 261 VLYVSFGTTTA-MSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYE---DSVKDKGLVVRDWAPQLE 336 (422)
Q Consensus 261 vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~---~~~~~~~~~~~~~~pq~~ 336 (422)
.+++..|.+.. ...+.+.+.+.-+.+.+.+++++ |.+.. .+.+.+. .+. ..++.+....+...
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~~-----------~~~~~l~~~~~~~-~~~v~~~~~~~~~~ 358 (473)
T TIGR02095 292 PLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL-GTGDP-----------ELEEALRELAERY-PGNVRVIIGYDEAL 358 (473)
T ss_pred CEEEEEecCccccChHHHHHHHHHHHHcCcEEEEE-CCCCH-----------HHHHHHHHHHHHC-CCcEEEEEcCCHHH
Confidence 46666677753 33445555555554445666654 33210 0111221 222 23455544445443
Q ss_pred ---hhhcccccceeecC---Chh-hHHHHHhcCCcEEccCccc--chhhHHHHHHhhcCeEEEEeeccccccccCHHHHH
Q 039436 337 ---ILAHCSTGGFMSHC---GWN-SCMESITMGVPIVAWPMHS--DQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIE 407 (422)
Q Consensus 337 ---il~~~~~~~~i~Hg---G~~-s~~eal~~GvP~v~~P~~~--Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~ 407 (422)
+++. +++||.-. |.| +.+||+++|+|.|+-...+ |...+...-.+ -+.|..+. .-+++++.
T Consensus 359 ~~~~~~~--aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~-~~~G~l~~-------~~d~~~la 428 (473)
T TIGR02095 359 AHLIYAG--ADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAE-SGTGFLFE-------EYDPGALL 428 (473)
T ss_pred HHHHHHh--CCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCC-CCceEEeC-------CCCHHHHH
Confidence 4544 77888532 433 7899999999999875532 22211100011 26788776 34788999
Q ss_pred HHHHHHhc
Q 039436 408 NAVKRLMA 415 (422)
Q Consensus 408 ~av~~~l~ 415 (422)
+++.+++.
T Consensus 429 ~~i~~~l~ 436 (473)
T TIGR02095 429 AALSRALR 436 (473)
T ss_pred HHHHHHHH
Confidence 99988876
No 125
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=88.55 E-value=3.1 Score=39.47 Aligned_cols=143 Identities=12% Similarity=0.060 Sum_probs=78.9
Q ss_pred HHhhcccCCcceEEecCC-c--ccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeE
Q 039436 251 EWLDKQEKNSVLYVSFGT-T--TAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLV 327 (422)
Q Consensus 251 ~wl~~~~~~~vv~vs~Gs-~--~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~ 327 (422)
+|+....+++.|.+..|+ . -..+.+.+.++++.|.+.+.++++..++.. ....-+.+.+..... .
T Consensus 171 ~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~----------e~~~~~~i~~~~~~~--~ 238 (319)
T TIGR02193 171 AFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA----------EKQRAERIAEALPGA--V 238 (319)
T ss_pred hhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH----------HHHHHHHHHhhCCCC--e
Confidence 344433334555555554 3 235778899999999776777776544321 000112222222211 2
Q ss_pred Eeccc---chhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHH
Q 039436 328 VRDWA---PQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSN 404 (422)
Q Consensus 328 ~~~~~---pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~ 404 (422)
+.+-. .-..++++ +++||+. --|.++=|.+.|+|.|++ ++ +.+..+..= +|-...+-. ......++++
T Consensus 239 l~g~~sL~el~ali~~--a~l~I~~-DSgp~HlAaa~g~P~i~l--fg--~t~p~~~~P-~~~~~~~~~-~~~~~~I~~~ 309 (319)
T TIGR02193 239 VLPKMSLAEVAALLAG--ADAVVGV-DTGLTHLAAALDKPTVTL--YG--ATDPGRTGG-YGKPNVALL-GESGANPTPD 309 (319)
T ss_pred ecCCCCHHHHHHHHHc--CCEEEeC-CChHHHHHHHcCCCEEEE--EC--CCCHhhccc-CCCCceEEc-cCccCCCCHH
Confidence 22222 23456767 7799997 456788888899999986 32 122222211 232211111 1126689999
Q ss_pred HHHHHHHHHh
Q 039436 405 VIENAVKRLM 414 (422)
Q Consensus 405 ~l~~av~~~l 414 (422)
+|.++++++|
T Consensus 310 ~V~~ai~~~~ 319 (319)
T TIGR02193 310 EVLAALEELL 319 (319)
T ss_pred HHHHHHHhhC
Confidence 9999998875
No 126
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=87.98 E-value=0.9 Score=43.51 Aligned_cols=76 Identities=13% Similarity=0.302 Sum_probs=51.1
Q ss_pred CCeEEecccchhhhhhc--ccccceeec-------CCh------hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeE
Q 039436 324 KGLVVRDWAPQLEILAH--CSTGGFMSH-------CGW------NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLG 388 (422)
Q Consensus 324 ~~~~~~~~~pq~~il~~--~~~~~~i~H-------gG~------~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g 388 (422)
.|+...+|+|++++..+ ...+++... +.+ +-+.+.+++|+|+|++. +...+..+.+ -++|
T Consensus 207 ~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~-~~~G 281 (333)
T PRK09814 207 ANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVE-NGLG 281 (333)
T ss_pred CCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHh-CCce
Confidence 48889899999887543 122222211 111 22677899999999974 4567778877 6999
Q ss_pred EEEeeccccccccCHHHHHHHHHHH
Q 039436 389 LVMADWARRDEIVTSNVIENAVKRL 413 (422)
Q Consensus 389 ~~~~~~~~~~~~~~~~~l~~av~~~ 413 (422)
+.++ +.+++.++++++
T Consensus 282 ~~v~---------~~~el~~~l~~~ 297 (333)
T PRK09814 282 FVVD---------SLEELPEIIDNI 297 (333)
T ss_pred EEeC---------CHHHHHHHHHhc
Confidence 9986 456777777664
No 127
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=87.97 E-value=7.9 Score=31.25 Aligned_cols=90 Identities=11% Similarity=0.104 Sum_probs=51.4
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCcchhhHHHh
Q 039436 13 LLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACKFPSHIIPCCEAS 92 (422)
Q Consensus 13 ~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (422)
.+.+++.|.++||+|++++........... .++.+..++.+ . .. ....+
T Consensus 13 ~~~~~~~L~~~g~~V~ii~~~~~~~~~~~~-------------~~i~~~~~~~~---------~---k~---~~~~~--- 61 (139)
T PF13477_consen 13 IYNLAKELKKRGYDVHIITPRNDYEKYEII-------------EGIKVIRLPSP---------R---KS---PLNYI--- 61 (139)
T ss_pred HHHHHHHHHHCCCEEEEEEcCCCchhhhHh-------------CCeEEEEecCC---------C---Cc---cHHHH---
Confidence 568899999999999999996543222221 47888777411 0 00 11111
Q ss_pred hhchHHHHHHHHHhccCCCeeEEEEcCCch---hHHHHHhhCCC-CceEEee
Q 039436 93 KHLRHPLATLLNTLSATARRVVVIHDSLMA---SVIQDVCLIPN-AESYTFH 140 (422)
Q Consensus 93 ~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~---~~~~vA~~l~G-IP~v~~~ 140 (422)
. +. .+...+++ .+||+|.+..... .+..+++.. | +|.+...
T Consensus 62 ~-~~-~l~k~ik~----~~~DvIh~h~~~~~~~~~~l~~~~~-~~~~~i~~~ 106 (139)
T PF13477_consen 62 K-YF-RLRKIIKK----EKPDVIHCHTPSPYGLFAMLAKKLL-KNKKVIYTV 106 (139)
T ss_pred H-HH-HHHHHhcc----CCCCEEEEecCChHHHHHHHHHHHc-CCCCEEEEe
Confidence 1 11 33333333 3789886555443 233455666 8 8887543
No 128
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=87.42 E-value=2.9 Score=42.15 Aligned_cols=134 Identities=16% Similarity=0.088 Sum_probs=71.3
Q ss_pred cceEEecCCccc-CcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhcc--CCCeEEecccchhh
Q 039436 260 SVLYVSFGTTTA-MSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVK--DKGLVVRDWAPQLE 336 (422)
Q Consensus 260 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~~~~~~pq~~ 336 (422)
..+++..|.+.. ...+.+.+.+..+.+.+.+++++ |.+.. .+-+.+.+... ..++++....++..
T Consensus 296 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~~-----------~~~~~~~~~~~~~~~~v~~~~~~~~~~ 363 (476)
T cd03791 296 APLFGFVGRLTEQKGIDLLLEALPELLELGGQLVIL-GSGDP-----------EYEEALRELAARYPGRVAVLIGYDEAL 363 (476)
T ss_pred CCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEE-ecCCH-----------HHHHHHHHHHHhCCCcEEEEEeCCHHH
Confidence 346666777753 33445555555555445666544 33220 01112221111 23555433333332
Q ss_pred ---hhhcccccceeecC---Ch-hhHHHHHhcCCcEEccCccc--chhhHHHHHHhhcCeEEEEeeccccccccCHHHHH
Q 039436 337 ---ILAHCSTGGFMSHC---GW-NSCMESITMGVPIVAWPMHS--DQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIE 407 (422)
Q Consensus 337 ---il~~~~~~~~i~Hg---G~-~s~~eal~~GvP~v~~P~~~--Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~ 407 (422)
++.. +++++.-. |+ .+.+||+++|+|.|+....+ |...+...-.+ -|.|..++ .-+.+++.
T Consensus 364 ~~~~~~~--aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~-~~~G~~~~-------~~~~~~l~ 433 (476)
T cd03791 364 AHLIYAG--ADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTG-EGTGFVFE-------GYNADALL 433 (476)
T ss_pred HHHHHHh--CCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCC-CCCeEEeC-------CCCHHHHH
Confidence 4444 77887531 22 47899999999999875532 22211111112 25788886 34689999
Q ss_pred HHHHHHhc
Q 039436 408 NAVKRLMA 415 (422)
Q Consensus 408 ~av~~~l~ 415 (422)
++++++++
T Consensus 434 ~~i~~~l~ 441 (476)
T cd03791 434 AALRRALA 441 (476)
T ss_pred HHHHHHHH
Confidence 99998875
No 129
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=87.32 E-value=18 Score=34.99 Aligned_cols=186 Identities=16% Similarity=0.111 Sum_probs=90.7
Q ss_pred hhccHHHHHHHHHhhhccCCcccccC-CCCcCCCCCCCCCCCccccHHHhhcccCCcceEEecCCcccC---cHHHHHHH
Q 039436 205 RVIESAYMDLLEKATVAETFNHWALG-PFNPVTLPNKGGSNGRHFCLEWLDKQEKNSVLYVSFGTTTAM---SDEQIKEL 280 (422)
Q Consensus 205 ~~le~~~~~~~~~~~~~~~~~~~~VG-Pl~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~Gs~~~~---~~~~~~~~ 280 (422)
--+|+++.+.. +-+..||| |+....+ .. .......+=+.-..++.++.+-.||-.+- -.+-+.+.
T Consensus 144 lPFE~~~y~k~-------g~~~~yVGHpl~d~i~-~~---~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a 212 (381)
T COG0763 144 LPFEPAFYDKF-------GLPCTYVGHPLADEIP-LL---PDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQA 212 (381)
T ss_pred cCCCHHHHHhc-------CCCeEEeCChhhhhcc-cc---ccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHH
Confidence 34566655442 34578888 5532211 00 11122222232224567899999998542 22233344
Q ss_pred HHHHh-h-CCCeeEEEEecCCCCCccccchhcccCChhhHhhcc-CCCeEEecccchhhhhhcccccceeecCChhhHHH
Q 039436 281 AVGLK-Q-SNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVK-DKGLVVRDWAPQLEILAHCSTGGFMSHCGWNSCME 357 (422)
Q Consensus 281 ~~~l~-~-~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~e 357 (422)
++.|+ + .+.+|+.-+.... ...+-........ ..+.++.+--- ...+.. +++.+.-+|-. ++|
T Consensus 213 ~~~l~~~~~~~~~vlp~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~--aD~al~aSGT~-tLE 278 (381)
T COG0763 213 AQELKARYPDLKFVLPLVNAK----------YRRIIEEALKWEVAGLSLILIDGEK-RKAFAA--ADAALAASGTA-TLE 278 (381)
T ss_pred HHHHHhhCCCceEEEecCcHH----------HHHHHHHHhhccccCceEEecCchH-HHHHHH--hhHHHHhccHH-HHH
Confidence 44444 2 2467765443321 0000011111111 11233322111 123434 77888888876 678
Q ss_pred HHhcCCcEEccCcccc--hhhHHHHHHhhcCeE-------EEEeeccccccccCHHHHHHHHHHHhcCC
Q 039436 358 SITMGVPIVAWPMHSD--QPRNTLLITHLLKLG-------LVMADWARRDEIVTSNVIENAVKRLMASK 417 (422)
Q Consensus 358 al~~GvP~v~~P~~~D--q~~na~~~~~~~g~g-------~~~~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (422)
+..+|+|||+.=- .+ -+.-+++....+=++ ..+-+ +--.+.++++.|.+++..++.|+
T Consensus 279 ~aL~g~P~Vv~Yk-~~~it~~iak~lvk~~yisLpNIi~~~~ivP-Eliq~~~~pe~la~~l~~ll~~~ 345 (381)
T COG0763 279 AALAGTPMVVAYK-VKPITYFIAKRLVKLPYVSLPNILAGREIVP-ELIQEDCTPENLARALEELLLNG 345 (381)
T ss_pred HHHhCCCEEEEEe-ccHHHHHHHHHhccCCcccchHHhcCCccch-HHHhhhcCHHHHHHHHHHHhcCh
Confidence 9999999998621 11 123344444311111 11110 11134689999999999999987
No 130
>PRK00654 glgA glycogen synthase; Provisional
Probab=86.87 E-value=4.5 Score=40.73 Aligned_cols=132 Identities=14% Similarity=0.127 Sum_probs=70.3
Q ss_pred ceEEecCCccc-CcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhh---HhhccCCCeE-Eecccchh
Q 039436 261 VLYVSFGTTTA-MSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAY---EDSVKDKGLV-VRDWAPQL 335 (422)
Q Consensus 261 vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~---~~~~~~~~~~-~~~~~pq~ 335 (422)
.+++..|.+.. ...+.+.+.+.-+.+.+.+++++ |.+.. .+-+.+ .++... ++. ..+|-.+.
T Consensus 283 ~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lviv-G~g~~-----------~~~~~l~~l~~~~~~-~v~~~~g~~~~~ 349 (466)
T PRK00654 283 PLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLL-GTGDP-----------ELEEAFRALAARYPG-KVGVQIGYDEAL 349 (466)
T ss_pred cEEEEeeccccccChHHHHHHHHHHHhcCCEEEEE-ecCcH-----------HHHHHHHHHHHHCCC-cEEEEEeCCHHH
Confidence 36666677643 33344444444343346676655 33210 011122 222222 333 34563221
Q ss_pred --hhhhcccccceeec---CChh-hHHHHHhcCCcEEccCccc--chhhHHHHHHhhcCeEEEEeeccccccccCHHHHH
Q 039436 336 --EILAHCSTGGFMSH---CGWN-SCMESITMGVPIVAWPMHS--DQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIE 407 (422)
Q Consensus 336 --~il~~~~~~~~i~H---gG~~-s~~eal~~GvP~v~~P~~~--Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~ 407 (422)
.+++. +++||.- -|+| +.+||+++|+|.|+.-..+ |...+...-.+ -+.|..++ .-+++++.
T Consensus 350 ~~~~~~~--aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~-~~~G~lv~-------~~d~~~la 419 (466)
T PRK00654 350 AHRIYAG--ADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDG-EATGFVFD-------DFNAEDLL 419 (466)
T ss_pred HHHHHhh--CCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCC-CCceEEeC-------CCCHHHHH
Confidence 34555 7788853 2444 8899999999999875432 32211111112 27788876 34788999
Q ss_pred HHHHHHhc
Q 039436 408 NAVKRLMA 415 (422)
Q Consensus 408 ~av~~~l~ 415 (422)
+++.+++.
T Consensus 420 ~~i~~~l~ 427 (466)
T PRK00654 420 RALRRALE 427 (466)
T ss_pred HHHHHHHH
Confidence 99988875
No 131
>PRK14098 glycogen synthase; Provisional
Probab=85.77 E-value=6.6 Score=39.86 Aligned_cols=132 Identities=10% Similarity=0.058 Sum_probs=72.5
Q ss_pred ceEEecCCccc-CcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccchh---h
Q 039436 261 VLYVSFGTTTA-MSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQL---E 336 (422)
Q Consensus 261 vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~---~ 336 (422)
.+++..|.+.. ...+.+.+.+.-+.+.+.+++. +|.+... ....+ ..+..+. +.++.+.++.+.. .
T Consensus 308 ~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvi-vG~G~~~-------~~~~l-~~l~~~~-~~~V~~~g~~~~~~~~~ 377 (489)
T PRK14098 308 PLVGVIINFDDFQGAELLAESLEKLVELDIQLVI-CGSGDKE-------YEKRF-QDFAEEH-PEQVSVQTEFTDAFFHL 377 (489)
T ss_pred CEEEEeccccccCcHHHHHHHHHHHHhcCcEEEE-EeCCCHH-------HHHHH-HHHHHHC-CCCEEEEEecCHHHHHH
Confidence 35566677643 3444555555555444566554 4433200 00001 1122222 3467777777764 3
Q ss_pred hhhcccccceeecC---Ch-hhHHHHHhcCCcEEccCccc--chhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHH
Q 039436 337 ILAHCSTGGFMSHC---GW-NSCMESITMGVPIVAWPMHS--DQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAV 410 (422)
Q Consensus 337 il~~~~~~~~i~Hg---G~-~s~~eal~~GvP~v~~P~~~--Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av 410 (422)
+++. +++|+.-. |. .+.+||+++|+|.|+.-..+ |...+ ...+ -+.|..++ .-+++++.++|
T Consensus 378 ~~a~--aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~-~~~G~l~~-------~~d~~~la~ai 445 (489)
T PRK14098 378 AIAG--LDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSED-KGSGFIFH-------DYTPEALVAKL 445 (489)
T ss_pred HHHh--CCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCC-CCceeEeC-------CCCHHHHHHHH
Confidence 5555 77888643 22 37889999999888776532 32211 1112 36777776 34788899998
Q ss_pred HHHh
Q 039436 411 KRLM 414 (422)
Q Consensus 411 ~~~l 414 (422)
++++
T Consensus 446 ~~~l 449 (489)
T PRK14098 446 GEAL 449 (489)
T ss_pred HHHH
Confidence 8765
No 132
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=84.32 E-value=54 Score=33.81 Aligned_cols=62 Identities=16% Similarity=0.195 Sum_probs=42.7
Q ss_pred CCeEEecccch-hhhhhcccccceeec---CC-hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEe
Q 039436 324 KGLVVRDWAPQ-LEILAHCSTGGFMSH---CG-WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMA 392 (422)
Q Consensus 324 ~~~~~~~~~pq-~~il~~~~~~~~i~H---gG-~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~ 392 (422)
.++.+.+|..+ ..++.. +++||.. -| -++++||+++|+|+|+.... .+...+.+ -..|..++
T Consensus 455 d~V~FlG~~~Dv~~~Laa--ADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~d-G~nG~LVp 521 (578)
T PRK15490 455 ERILFVGASRDVGYWLQK--MNVFILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIE-GVSGFILD 521 (578)
T ss_pred CcEEECCChhhHHHHHHh--CCEEEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHccc-CCcEEEEC
Confidence 47788787543 235655 7788863 34 56999999999999987543 34555555 46777776
No 133
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=79.88 E-value=5.1 Score=29.91 Aligned_cols=56 Identities=11% Similarity=0.163 Sum_probs=38.9
Q ss_pred cCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcC-eEEEEeeccccccccCHHHHHHHHHHHhcCCcc
Q 039436 349 HCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLK-LGLVMADWARRDEIVTSNVIENAVKRLMASKEG 419 (422)
Q Consensus 349 HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g-~g~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~ 419 (422)
++-..-+.|++++|+|+|+-.. ......+.+ | -++... +.+++..+++.+++|++.
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~--~~~~~~~~---------~~~el~~~i~~ll~~~~~ 65 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFED--GEHIITYN---------DPEELAEKIEYLLENPEE 65 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCC--CCeEEEEC---------CHHHHHHHHHHHHCCHHH
Confidence 4445689999999999998755 333333322 4 333331 899999999999998753
No 134
>PRK14099 glycogen synthase; Provisional
Probab=77.71 E-value=16 Score=37.09 Aligned_cols=70 Identities=13% Similarity=0.152 Sum_probs=40.9
Q ss_pred ccccceeec---CCh-hhHHHHHhcCCcEEccCccc--chhhHHHHHHhhc--CeEEEEeeccccccccCHHHHHHHHHH
Q 039436 341 CSTGGFMSH---CGW-NSCMESITMGVPIVAWPMHS--DQPRNTLLITHLL--KLGLVMADWARRDEIVTSNVIENAVKR 412 (422)
Q Consensus 341 ~~~~~~i~H---gG~-~s~~eal~~GvP~v~~P~~~--Dq~~na~~~~~~~--g~g~~~~~~~~~~~~~~~~~l~~av~~ 412 (422)
.++++||.- =|. .+.+||+++|+|.|+.-..+ |-..+.....+.. +.|..++ .-+.+++.+++.+
T Consensus 368 a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~-------~~d~~~La~ai~~ 440 (485)
T PRK14099 368 AGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFS-------PVTADALAAALRK 440 (485)
T ss_pred hcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeC-------CCCHHHHHHHHHH
Confidence 347788853 333 37789999997666654322 3222211111101 4687776 3478899999987
Q ss_pred ---HhcCC
Q 039436 413 ---LMASK 417 (422)
Q Consensus 413 ---~l~~~ 417 (422)
+++|+
T Consensus 441 a~~l~~d~ 448 (485)
T PRK14099 441 TAALFADP 448 (485)
T ss_pred HHHHhcCH
Confidence 55553
No 135
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=75.05 E-value=28 Score=32.70 Aligned_cols=103 Identities=9% Similarity=-0.045 Sum_probs=64.0
Q ss_pred CccCHHHHHHHHHHHHhCCCcEEEEeCCC--CchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCC
Q 039436 6 AQGHLNQLLQLSRLVLSYNIPVHYVGSAV--HNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACKFPS 83 (422)
Q Consensus 6 ~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~--~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~~~~ 83 (422)
-.-|++=+-.|-+.|.++||+|.+-+-+. -.+.+... |+.+..+.. .+ ..
T Consensus 9 n~~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~y--------------gf~~~~Igk-~g-------------~~ 60 (346)
T COG1817 9 NPPHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLY--------------GFPYKSIGK-HG-------------GV 60 (346)
T ss_pred CcchhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHh--------------CCCeEeecc-cC-------------Cc
Confidence 34588889999999999999997766543 23445554 778777741 10 01
Q ss_pred cchhhHHHhhhchHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeech
Q 039436 84 HIIPCCEASKHLRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSV 142 (422)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~ 142 (422)
.+..-+ . .+.... -.|.++.+..+||+.|. -+.+-...+|.-+ |+|.+.|.-.
T Consensus 61 tl~~Kl--~-~~~eR~-~~L~ki~~~~kpdv~i~-~~s~~l~rvafgL-g~psIi~~D~ 113 (346)
T COG1817 61 TLKEKL--L-ESAERV-YKLSKIIAEFKPDVAIG-KHSPELPRVAFGL-GIPSIIFVDN 113 (346)
T ss_pred cHHHHH--H-HHHHHH-HHHHHHHhhcCCceEee-cCCcchhhHHhhc-CCceEEecCC
Confidence 111011 0 111111 12233444457889888 6678899999999 9999988543
No 136
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=72.33 E-value=18 Score=34.34 Aligned_cols=137 Identities=12% Similarity=0.046 Sum_probs=74.4
Q ss_pred CcceE-EecCCcc--cCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEeccc--c
Q 039436 259 NSVLY-VSFGTTT--AMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWA--P 333 (422)
Q Consensus 259 ~~vv~-vs~Gs~~--~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~--p 333 (422)
++.|. +-.||.. ..+.+.+.++++.|.+.+.++++..++.. ....-+.+.+.. .++.+.+-. .
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~----------e~~~~~~i~~~~--~~~~l~g~~sL~ 245 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH----------EEQRAKRLAEGF--PYVEVLPKLSLE 245 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH----------HHHHHHHHHccC--CcceecCCCCHH
Confidence 34443 4444442 36788999999999777777765444321 000111221111 122222222 2
Q ss_pred -hhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCe-EEEEeeccccccccCHHHHHHHHH
Q 039436 334 -QLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKL-GLVMADWARRDEIVTSNVIENAVK 411 (422)
Q Consensus 334 -q~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~-g~~~~~~~~~~~~~~~~~l~~av~ 411 (422)
-..++.+ +++||+.. -|.++=|.+.|+|+|++ ++ +.+..+..- +|- ...+..+..-..+++.|+|.++++
T Consensus 246 elaali~~--a~l~I~nD-SGp~HlA~A~g~p~val--fG--pt~p~~~~p-~~~~~~~~~~~~~cm~~I~~e~V~~~~~ 317 (322)
T PRK10964 246 QVARVLAG--AKAVVSVD-TGLSHLTAALDRPNITL--YG--PTDPGLIGG-YGKNQHACRSPGKSMADLSAETVFQKLE 317 (322)
T ss_pred HHHHHHHh--CCEEEecC-CcHHHHHHHhCCCEEEE--EC--CCCcccccC-CCCCceeecCCCcccccCCHHHHHHHHH
Confidence 3446777 77999985 56788888999999987 22 111111111 111 011111111255899999999999
Q ss_pred HHhc
Q 039436 412 RLMA 415 (422)
Q Consensus 412 ~~l~ 415 (422)
++|+
T Consensus 318 ~~l~ 321 (322)
T PRK10964 318 TLIS 321 (322)
T ss_pred HHhh
Confidence 9875
No 137
>PRK10125 putative glycosyl transferase; Provisional
Probab=71.86 E-value=19 Score=35.51 Aligned_cols=44 Identities=14% Similarity=0.161 Sum_probs=30.0
Q ss_pred ccceeecC----ChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEe
Q 039436 343 TGGFMSHC----GWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMA 392 (422)
Q Consensus 343 ~~~~i~Hg----G~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~ 392 (422)
+++||.-. --++++||+++|+|.|+....+ ....+ +. +.|..++
T Consensus 307 aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~Eiv-~~-~~G~lv~ 354 (405)
T PRK10125 307 MDALVFSSRVDNYPLILCEALSIGVPVIATHSDA----AREVL-QK-SGGKTVS 354 (405)
T ss_pred CCEEEECCccccCcCHHHHHHHcCCCEEEeCCCC----hHHhE-eC-CcEEEEC
Confidence 66777643 2458999999999999987765 12223 32 5687775
No 138
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=71.36 E-value=31 Score=34.60 Aligned_cols=20 Identities=10% Similarity=0.036 Sum_probs=17.8
Q ss_pred HHHHHHHHhCCCcEEEEeCC
Q 039436 14 LQLSRLVLSYNIPVHYVGSA 33 (422)
Q Consensus 14 l~La~~L~~~Gh~Vt~~t~~ 33 (422)
=.|+++|+++||+|+++++.
T Consensus 23 ~~L~~aL~~~G~~V~Vi~p~ 42 (476)
T cd03791 23 GALPKALAKLGHDVRVIMPK 42 (476)
T ss_pred HHHHHHHHHCCCeEEEEecC
Confidence 35999999999999999965
No 139
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=71.24 E-value=18 Score=33.40 Aligned_cols=39 Identities=8% Similarity=0.005 Sum_probs=31.5
Q ss_pred cCCccCHHHHHHHHHHHHhCC--CcEEEEeCCCCchhhhhh
Q 039436 4 FPAQGHLNQLLQLSRLVLSYN--IPVHYVGSAVHNRQAQVR 42 (422)
Q Consensus 4 ~p~~GHv~P~l~La~~L~~~G--h~Vt~~t~~~~~~~~~~~ 42 (422)
..+-|++.=+..+.++|+++. -+|++++.+.+.+.++..
T Consensus 7 ~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~~~~l~~~~ 47 (279)
T cd03789 7 LSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLLELM 47 (279)
T ss_pred cccHHHHHHHHHHHHHHHHHCCCCEEEEEEChhhHHHHhcC
Confidence 456788888999999998864 899999998877776654
No 140
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=71.17 E-value=56 Score=29.95 Aligned_cols=133 Identities=19% Similarity=0.320 Sum_probs=71.0
Q ss_pred ceEEecCCccc-CcHHHHHHHHHHHhhCCC--eeEEEEecCCCCCccccchhcccCChhhHhhcc-CCCeEEecccch--
Q 039436 261 VLYVSFGTTTA-MSDEQIKELAVGLKQSNQ--KFIWVLRDADRGDVFNGEVRRAELPKAYEDSVK-DKGLVVRDWAPQ-- 334 (422)
Q Consensus 261 vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~--~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~~~~~~pq-- 334 (422)
.+++..|.... ...+.+.+.+..+..... .++ .++..... ...+.. +..... ..++...+++++
T Consensus 200 ~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~-~~g~~~~~--------~~~~~~-~~~~~~~~~~v~~~g~~~~~~ 269 (381)
T COG0438 200 FVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLV-IVGDGPER--------REELEK-LAKKLGLEDNVKFLGYVPDEE 269 (381)
T ss_pred eEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEE-EEcCCCcc--------HHHHHH-HHHHhCCCCcEEEecccCHHH
Confidence 46666777544 444555555555544332 333 33333210 001111 222222 356777788882
Q ss_pred -hhhhhcccccceeec---CChhh-HHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHH
Q 039436 335 -LEILAHCSTGGFMSH---CGWNS-CMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENA 409 (422)
Q Consensus 335 -~~il~~~~~~~~i~H---gG~~s-~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~a 409 (422)
..++.. +++++.- .|.|. +.||+++|+|.|.... ......+.+ -+.|. +.. ....+++..+
T Consensus 270 ~~~~~~~--~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~----~~~~e~~~~-~~~g~-~~~------~~~~~~~~~~ 335 (381)
T COG0438 270 LAELLAS--ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDV----GGIPEVVED-GETGL-LVP------PGDVEELADA 335 (381)
T ss_pred HHHHHHh--CCEEEeccccccchHHHHHHHhcCCcEEECCC----CChHHHhcC-CCceE-ecC------CCCHHHHHHH
Confidence 234544 4566665 35544 5999999999976543 323333333 22466 431 1268899999
Q ss_pred HHHHhcCC
Q 039436 410 VKRLMASK 417 (422)
Q Consensus 410 v~~~l~~~ 417 (422)
+..++++.
T Consensus 336 i~~~~~~~ 343 (381)
T COG0438 336 LEQLLEDP 343 (381)
T ss_pred HHHHhcCH
Confidence 98888765
No 141
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=70.95 E-value=4.4 Score=33.80 Aligned_cols=27 Identities=26% Similarity=0.293 Sum_probs=21.0
Q ss_pred cCHHHHHHHHHHHHhCCCcEEEEeCCC
Q 039436 8 GHLNQLLQLSRLVLSYNIPVHYVGSAV 34 (422)
Q Consensus 8 GHv~P~l~La~~L~~~Gh~Vt~~t~~~ 34 (422)
|=-.=++.|+++|+++||+|++++...
T Consensus 13 G~e~~~~~l~~~l~~~G~~v~v~~~~~ 39 (177)
T PF13439_consen 13 GAERVVLNLARALAKRGHEVTVVSPGV 39 (177)
T ss_dssp HHHHHHHHHHHHHHHTT-EEEEEESS-
T ss_pred hHHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 344567899999999999999998764
No 142
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=70.44 E-value=19 Score=30.53 Aligned_cols=27 Identities=19% Similarity=0.332 Sum_probs=22.0
Q ss_pred ccceeecCChh------hHHHHHhcCCcEEccC
Q 039436 343 TGGFMSHCGWN------SCMESITMGVPIVAWP 369 (422)
Q Consensus 343 ~~~~i~HgG~~------s~~eal~~GvP~v~~P 369 (422)
.+++++|+|-| .+.||...++|+|++.
T Consensus 61 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 61 PVAVVCTSGTAVANLLPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred CEEEEECCchHHHHHhHHHHHHHhcCCCEEEEE
Confidence 55778888744 7789999999999994
No 143
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=70.39 E-value=2.7 Score=42.88 Aligned_cols=75 Identities=12% Similarity=0.211 Sum_probs=53.8
Q ss_pred CCeEEecccch---hhhhhcccccceeecC---ChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecccc
Q 039436 324 KGLVVRDWAPQ---LEILAHCSTGGFMSHC---GWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARR 397 (422)
Q Consensus 324 ~~~~~~~~~pq---~~il~~~~~~~~i~Hg---G~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~ 397 (422)
..+.+.++... ..++.+ ++++|.=+ |.++.+||+.+|+|+| .......|.+ -.=|.-+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~--arl~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d-~~NG~li~----- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDK--LRLIIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEH-NKNGYIID----- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhh--heEEEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEc-CCCcEEeC-----
Confidence 36777777763 345666 77888765 7789999999999999 3333445544 45555554
Q ss_pred ccccCHHHHHHHHHHHhcCC
Q 039436 398 DEIVTSNVIENAVKRLMASK 417 (422)
Q Consensus 398 ~~~~~~~~l~~av~~~l~~~ 417 (422)
+.++|.+++..+|.+.
T Consensus 474 ----d~~~l~~al~~~L~~~ 489 (519)
T TIGR03713 474 ----DISELLKALDYYLDNL 489 (519)
T ss_pred ----CHHHHHHHHHHHHhCH
Confidence 7789999999998875
No 144
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=69.93 E-value=58 Score=30.87 Aligned_cols=79 Identities=13% Similarity=0.234 Sum_probs=47.7
Q ss_pred chhhhhhcccccc-eeecCChhhHHHHHhcCCcEEccCcccchhhH---HHHHHhhcCeEEEEeeccc------cccccC
Q 039436 333 PQLEILAHCSTGG-FMSHCGWNSCMESITMGVPIVAWPMHSDQPRN---TLLITHLLKLGLVMADWAR------RDEIVT 402 (422)
Q Consensus 333 pq~~il~~~~~~~-~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~n---a~~~~~~~g~g~~~~~~~~------~~~~~~ 402 (422)
|+...|.. ++. |||=--.+.+.||++.|+|+.+++.-.-.... ...+.+ .|.-..+..+++ ....-.
T Consensus 221 Py~~~La~--ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~-~g~~r~~~~~~~~~~~~~~~pl~e 297 (311)
T PF06258_consen 221 PYLGFLAA--ADAIVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEE-RGAVRPFTGWRDLEQWTPYEPLDE 297 (311)
T ss_pred cHHHHHHh--CCEEEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHH-CCCEEECCCcccccccccCCCccH
Confidence 56777877 444 55555578899999999999999987611112 234555 577666653211 111123
Q ss_pred HHHHHHHHHHHh
Q 039436 403 SNVIENAVKRLM 414 (422)
Q Consensus 403 ~~~l~~av~~~l 414 (422)
.+.+++.|++-+
T Consensus 298 t~r~A~~i~~r~ 309 (311)
T PF06258_consen 298 TDRVAAEIRERL 309 (311)
T ss_pred HHHHHHHHHHHh
Confidence 456666666543
No 145
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=69.15 E-value=24 Score=32.53 Aligned_cols=42 Identities=14% Similarity=0.306 Sum_probs=33.4
Q ss_pred eEEecccchhhhhhcccccceeecCChhhHHHHHhcCCcEEccCc
Q 039436 326 LVVRDWAPQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPM 370 (422)
Q Consensus 326 ~~~~~~~pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~ 370 (422)
+++.+-++-..++.+ ++++||-.+- .-+||+.+|+|.+++..
T Consensus 185 ~~~~~~~~~~~Ll~~--s~~VvtinSt-vGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 185 VIIDDDVNLYELLEQ--SDAVVTINST-VGLEALLHGKPVIVFGR 226 (269)
T ss_pred EEECCCCCHHHHHHh--CCEEEEECCH-HHHHHHHcCCceEEecC
Confidence 444566778889999 7799988654 67999999999999854
No 146
>PLN02470 acetolactate synthase
Probab=68.13 E-value=34 Score=35.60 Aligned_cols=91 Identities=14% Similarity=0.153 Sum_probs=53.5
Q ss_pred ecCCcccCcHH--HHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhh-----
Q 039436 265 SFGTTTAMSDE--QIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEI----- 337 (422)
Q Consensus 265 s~Gs~~~~~~~--~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~i----- 337 (422)
+|||....+.. ...-+++.|++.|.+.|+.+.+... ..+-+.+. ..+++.++. +-|+..
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~----------~~l~dal~---~~~~i~~i~-~rhE~~A~~~A 67 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGAS----------MEIHQALT---RSNCIRNVL-CRHEQGEVFAA 67 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCccc----------HHHHHHHh---ccCCceEEE-eccHHHHHHHH
Confidence 47776443332 3456888888889888887765431 11112221 112333221 122221
Q ss_pred ----hhcccccceeecCChh------hHHHHHhcCCcEEccC
Q 039436 338 ----LAHCSTGGFMSHCGWN------SCMESITMGVPIVAWP 369 (422)
Q Consensus 338 ----l~~~~~~~~i~HgG~~------s~~eal~~GvP~v~~P 369 (422)
..+...+++++|.|-| .+.+|...++|+|++.
T Consensus 68 dgyar~tg~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 68 EGYAKASGKVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred HHHHHHhCCCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 1224577889998854 7889999999999994
No 147
>PHA01630 putative group 1 glycosyl transferase
Probab=67.00 E-value=57 Score=31.16 Aligned_cols=40 Identities=15% Similarity=0.136 Sum_probs=27.5
Q ss_pred cccchhhh---hhcccccceee---cCC-hhhHHHHHhcCCcEEccCcc
Q 039436 330 DWAPQLEI---LAHCSTGGFMS---HCG-WNSCMESITMGVPIVAWPMH 371 (422)
Q Consensus 330 ~~~pq~~i---l~~~~~~~~i~---HgG-~~s~~eal~~GvP~v~~P~~ 371 (422)
.++|+..+ +.. +++||. ..| -.+++||+++|+|.|+.-..
T Consensus 196 ~~v~~~~l~~~y~~--aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~g 242 (331)
T PHA01630 196 TPLPDDDIYSLFAG--CDILFYPVRGGAFEIPVIEALALGLDVVVTEKG 242 (331)
T ss_pred ccCCHHHHHHHHHh--CCEEEECCccccCChHHHHHHHcCCCEEEeCCC
Confidence 34665553 545 667773 333 45899999999999997653
No 148
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=66.88 E-value=78 Score=26.72 Aligned_cols=28 Identities=18% Similarity=0.234 Sum_probs=23.0
Q ss_pred cccceeecCCh------hhHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCGW------NSCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG~------~s~~eal~~GvP~v~~P 369 (422)
+.+++++|+|- +.+.+|...++|+|++.
T Consensus 63 ~~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 63 KLGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 35688888884 47889999999999995
No 149
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=64.56 E-value=47 Score=33.38 Aligned_cols=21 Identities=14% Similarity=0.042 Sum_probs=18.4
Q ss_pred HHHHHHHHhCCCcEEEEeCCC
Q 039436 14 LQLSRLVLSYNIPVHYVGSAV 34 (422)
Q Consensus 14 l~La~~L~~~Gh~Vt~~t~~~ 34 (422)
-.|+++|+++||+|.++++..
T Consensus 24 ~~L~~aL~~~G~~v~v~~p~y 44 (473)
T TIGR02095 24 GALPKALAALGHDVRVLLPAY 44 (473)
T ss_pred HHHHHHHHHcCCeEEEEecCC
Confidence 479999999999999999753
No 150
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=63.72 E-value=36 Score=28.17 Aligned_cols=28 Identities=11% Similarity=0.185 Sum_probs=22.2
Q ss_pred ccceeecCC------hhhHHHHHhcCCcEEccCc
Q 039436 343 TGGFMSHCG------WNSCMESITMGVPIVAWPM 370 (422)
Q Consensus 343 ~~~~i~HgG------~~s~~eal~~GvP~v~~P~ 370 (422)
..++++|+| .+.+.+|...++|+|++.-
T Consensus 60 ~~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 60 PGVVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred CEEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 557888866 4578889999999999953
No 151
>PLN02316 synthase/transferase
Probab=63.52 E-value=65 Score=35.81 Aligned_cols=83 Identities=11% Similarity=-0.029 Sum_probs=49.1
Q ss_pred CeEEecccchh---hhhhcccccceeecC---C-hhhHHHHHhcCCcEEccCccc--chhhHHHH----HHh--hcCeEE
Q 039436 325 GLVVRDWAPQL---EILAHCSTGGFMSHC---G-WNSCMESITMGVPIVAWPMHS--DQPRNTLL----ITH--LLKLGL 389 (422)
Q Consensus 325 ~~~~~~~~pq~---~il~~~~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~--Dq~~na~~----~~~--~~g~g~ 389 (422)
++.+....+.. .+++. +++||.-. | -.+.+||+++|+|.|+.-..+ |....... ... .-+.|.
T Consensus 901 rV~f~g~~de~lah~iyaa--ADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGf 978 (1036)
T PLN02316 901 RARLCLTYDEPLSHLIYAG--ADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGF 978 (1036)
T ss_pred eEEEEecCCHHHHHHHHHh--CcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceE
Confidence 44443333333 35544 88888542 2 348999999999888765432 33222110 000 014677
Q ss_pred EEeeccccccccCHHHHHHHHHHHhcC
Q 039436 390 VMADWARRDEIVTSNVIENAVKRLMAS 416 (422)
Q Consensus 390 ~~~~~~~~~~~~~~~~l~~av~~~l~~ 416 (422)
.++ ..+++.+..+|.+++.+
T Consensus 979 lf~-------~~d~~aLa~AL~raL~~ 998 (1036)
T PLN02316 979 SFD-------GADAAGVDYALNRAISA 998 (1036)
T ss_pred EeC-------CCCHHHHHHHHHHHHhh
Confidence 776 45788888998888864
No 152
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=60.75 E-value=1e+02 Score=25.93 Aligned_cols=27 Identities=22% Similarity=0.327 Sum_probs=21.4
Q ss_pred ccceeecCCh------hhHHHHHhcCCcEEccC
Q 039436 343 TGGFMSHCGW------NSCMESITMGVPIVAWP 369 (422)
Q Consensus 343 ~~~~i~HgG~------~s~~eal~~GvP~v~~P 369 (422)
.+++++|.|- +.+.+|...++|+|++.
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 92 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIV 92 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEe
Confidence 5567777774 47788999999999995
No 153
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=60.55 E-value=75 Score=31.76 Aligned_cols=81 Identities=11% Similarity=0.154 Sum_probs=52.6
Q ss_pred CCeE-Eecccc--hhhhhhcccccceeecCC--hhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccc
Q 039436 324 KGLV-VRDWAP--QLEILAHCSTGGFMSHCG--WNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRD 398 (422)
Q Consensus 324 ~~~~-~~~~~p--q~~il~~~~~~~~i~HgG--~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~ 398 (422)
.|++ ..++.+ -..++..+.+=+-++|+. ..++.||+.+|+|++..=... .+...+.+ |--+.
T Consensus 328 ~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~---~~~~~i~~----g~l~~------ 394 (438)
T TIGR02919 328 DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETA---HNRDFIAS----ENIFE------ 394 (438)
T ss_pred CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEeccc---CCcccccC----Cceec------
Confidence 3544 445565 345788866666777866 679999999999999874322 12222211 33333
Q ss_pred cccCHHHHHHHHHHHhcCCc
Q 039436 399 EIVTSNVIENAVKRLMASKE 418 (422)
Q Consensus 399 ~~~~~~~l~~av~~~l~~~~ 418 (422)
.-+.+++.++|.++|.+++
T Consensus 395 -~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 395 -HNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred -CCCHHHHHHHHHHHhcCHH
Confidence 2367899999999988763
No 154
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=60.48 E-value=22 Score=35.66 Aligned_cols=74 Identities=14% Similarity=0.113 Sum_probs=50.0
Q ss_pred ecccchhhhhh-cccccceee---cCChh-hHHHHHhcCCc----EEccCcccchhhHHHHHHhhcCeEEEEeecccccc
Q 039436 329 RDWAPQLEILA-HCSTGGFMS---HCGWN-SCMESITMGVP----IVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDE 399 (422)
Q Consensus 329 ~~~~pq~~il~-~~~~~~~i~---HgG~~-s~~eal~~GvP----~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~ 399 (422)
.+.+++.++.+ ..++++|+. +=|+| ++.||+++|+| +|+--+.+-. . . ++-|+.+.
T Consensus 341 ~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~----~---~-l~~gllVn------- 405 (456)
T TIGR02400 341 NRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA----Q---E-LNGALLVN------- 405 (456)
T ss_pred cCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh----H---H-hCCcEEEC-------
Confidence 34566766544 245788886 34755 78899999999 6665544322 1 1 23466665
Q ss_pred ccCHHHHHHHHHHHhcCC
Q 039436 400 IVTSNVIENAVKRLMASK 417 (422)
Q Consensus 400 ~~~~~~l~~av~~~l~~~ 417 (422)
..+.++++++|.++|+.+
T Consensus 406 P~d~~~lA~aI~~aL~~~ 423 (456)
T TIGR02400 406 PYDIDGMADAIARALTMP 423 (456)
T ss_pred CCCHHHHHHHHHHHHcCC
Confidence 357899999999999854
No 155
>PLN02939 transferase, transferring glycosyl groups
Probab=60.00 E-value=64 Score=35.44 Aligned_cols=83 Identities=13% Similarity=0.075 Sum_probs=51.6
Q ss_pred CCeEEecccchh---hhhhcccccceeecC---C-hhhHHHHHhcCCcEEccCccc--chhhH--HHHHHhhcCeEEEEe
Q 039436 324 KGLVVRDWAPQL---EILAHCSTGGFMSHC---G-WNSCMESITMGVPIVAWPMHS--DQPRN--TLLITHLLKLGLVMA 392 (422)
Q Consensus 324 ~~~~~~~~~pq~---~il~~~~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~--Dq~~n--a~~~~~~~g~g~~~~ 392 (422)
.++.+.++.+.. .+++. +++||.-. | -.+.+||+++|+|.|+....+ |...+ ...+.+.-+.|..+.
T Consensus 837 drV~FlG~~de~lah~IYAa--ADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~ 914 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAA--SDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFL 914 (977)
T ss_pred CeEEEEeccCHHHHHHHHHh--CCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEec
Confidence 357777777654 35655 88998642 2 247899999999999876543 32221 111111125677665
Q ss_pred eccccccccCHHHHHHHHHHHhc
Q 039436 393 DWARRDEIVTSNVIENAVKRLMA 415 (422)
Q Consensus 393 ~~~~~~~~~~~~~l~~av~~~l~ 415 (422)
.-+++++..++.+++.
T Consensus 915 -------~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 915 -------TPDEQGLNSALERAFN 930 (977)
T ss_pred -------CCCHHHHHHHHHHHHH
Confidence 3477888888877664
No 156
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=59.73 E-value=23 Score=29.28 Aligned_cols=39 Identities=18% Similarity=0.315 Sum_probs=31.4
Q ss_pred CCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEec
Q 039436 258 KNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRD 297 (422)
Q Consensus 258 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~ 297 (422)
.+.+|+|++||-.....+.++++++.+. .+.+++++.-.
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~~ 88 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNPH 88 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEECC
Confidence 4578999999998888999999999885 35777775443
No 157
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=59.45 E-value=61 Score=24.08 Aligned_cols=28 Identities=11% Similarity=0.198 Sum_probs=21.2
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCchhhhhh
Q 039436 13 LLQLSRLVLSYNIPVHYVGSAVHNRQAQVR 42 (422)
Q Consensus 13 ~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~ 42 (422)
++.+++.|.+.|+++ ++|+...+.++..
T Consensus 2 ~~~~~~~l~~lG~~i--~AT~gTa~~L~~~ 29 (90)
T smart00851 2 LVELAKRLAELGFEL--VATGGTAKFLREA 29 (90)
T ss_pred HHHHHHHHHHCCCEE--EEccHHHHHHHHC
Confidence 578999999999988 4555666666665
No 158
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=57.77 E-value=45 Score=31.86 Aligned_cols=99 Identities=8% Similarity=0.120 Sum_probs=58.9
Q ss_pred CCcceEEecCCcc---cCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeE-Eeccc-
Q 039436 258 KNSVLYVSFGTTT---AMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLV-VRDWA- 332 (422)
Q Consensus 258 ~~~vv~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~-~~~~~- 332 (422)
.++.|.+..|+.. ..+.+.+.++++.|.+.+.++++.-++...+ ..+-+.+.+.....+++ +.+-.
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e---------~~~~~~i~~~~~~~~~~~l~g~~s 250 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDE---------LAMVNEIAQGCQTPRVTSLAGKLT 250 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHH---------HHHHHHHHhhCCCCcccccCCCCC
Confidence 3456777777652 3577889999998877777876553322100 00111222221211211 12221
Q ss_pred --chhhhhhcccccceeecCChhhHHHHHhcCCcEEcc
Q 039436 333 --PQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAW 368 (422)
Q Consensus 333 --pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 368 (422)
.-..++.+ +++||+. --|.++=|.+.|+|.|++
T Consensus 251 L~el~ali~~--a~l~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 251 LPQLAALIDH--ARLFIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHHHHHHHHh--CCEEEec-CCHHHHHHHHcCCCEEEE
Confidence 13446777 7799998 678899999999999987
No 159
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=57.73 E-value=32 Score=32.18 Aligned_cols=79 Identities=16% Similarity=0.267 Sum_probs=47.7
Q ss_pred cccchhhhhhcccccceeecCChhhHHH-HHhcCCcEEccCcccchhh--HHHHHHhhcCeEEEEeeccccccccCHHHH
Q 039436 330 DWAPQLEILAHCSTGGFMSHCGWNSCME-SITMGVPIVAWPMHSDQPR--NTLLITHLLKLGLVMADWARRDEIVTSNVI 406 (422)
Q Consensus 330 ~~~pq~~il~~~~~~~~i~HgG~~s~~e-al~~GvP~v~~P~~~Dq~~--na~~~~~~~g~g~~~~~~~~~~~~~~~~~l 406 (422)
.|-...++|.+ .++.|--. ||..| ++--|+|.|.+|-.+-|+. .|.+=.+.+|..+.+.+ -.+..-
T Consensus 301 sqqsfadiLH~--adaalgmA--GTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~-------~~aq~a 369 (412)
T COG4370 301 SQQSFADILHA--ADAALGMA--GTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR-------PEAQAA 369 (412)
T ss_pred eHHHHHHHHHH--HHHHHHhc--cchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC-------CchhhH
Confidence 45556667766 33444333 34443 5678999999999999854 45554455677777652 223333
Q ss_pred HHHHHHHhcCCcc
Q 039436 407 ENAVKRLMASKEG 419 (422)
Q Consensus 407 ~~av~~~l~~~~~ 419 (422)
..+++++|.|+++
T Consensus 370 ~~~~q~ll~dp~r 382 (412)
T COG4370 370 AQAVQELLGDPQR 382 (412)
T ss_pred HHHHHHHhcChHH
Confidence 3344458887765
No 160
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=56.20 E-value=22 Score=29.97 Aligned_cols=36 Identities=11% Similarity=0.184 Sum_probs=28.6
Q ss_pred ceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEe
Q 039436 261 VLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLR 296 (422)
Q Consensus 261 vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~ 296 (422)
.+|+|+||.......+++..+.+|.+.+.--|+.++
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~S 38 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAVS 38 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEec
Confidence 499999999998888999999999987753344443
No 161
>PRK06456 acetolactate synthase catalytic subunit; Reviewed
Probab=54.51 E-value=62 Score=33.54 Aligned_cols=28 Identities=14% Similarity=0.186 Sum_probs=22.6
Q ss_pred cccceeecCC------hhhHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCG------WNSCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG------~~s~~eal~~GvP~v~~P 369 (422)
..+++++|.| .+.+.+|...++|+|++-
T Consensus 68 ~~gv~~~t~GpG~~N~l~gi~~A~~~~~Pvl~i~ 101 (572)
T PRK06456 68 VPGVCTATSGPGTTNLVTGLITAYWDSSPVIAIT 101 (572)
T ss_pred CCEEEEeCCCCCHHHHHHHHHHHHhhCCCEEEEe
Confidence 3557788888 447799999999999994
No 162
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=54.42 E-value=33 Score=35.36 Aligned_cols=80 Identities=11% Similarity=0.054 Sum_probs=47.0
Q ss_pred hhhhhhcccccceee---cCChh-hHHHHHhcCCcEEccCccc-chhhHHHHHHhhcCeEEEEeeccccccccCHHHHHH
Q 039436 334 QLEILAHCSTGGFMS---HCGWN-SCMESITMGVPIVAWPMHS-DQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIEN 408 (422)
Q Consensus 334 q~~il~~~~~~~~i~---HgG~~-s~~eal~~GvP~v~~P~~~-Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~ 408 (422)
..+++.. +++||. +=||| +.+||+++|+|.|+--..+ ....+ ..+.+.-..|+.+.+.....-.-+.++|++
T Consensus 468 y~E~~~g--~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~ 544 (590)
T cd03793 468 YEEFVRG--CHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQ 544 (590)
T ss_pred hHHHhhh--ceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHH
Confidence 5556655 667776 45655 8999999999999987643 22222 112110025777753111111245678888
Q ss_pred HHHHHhcC
Q 039436 409 AVKRLMAS 416 (422)
Q Consensus 409 av~~~l~~ 416 (422)
++.+++..
T Consensus 545 ~m~~~~~~ 552 (590)
T cd03793 545 YMYEFCQL 552 (590)
T ss_pred HHHHHhCC
Confidence 88887753
No 163
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=53.31 E-value=56 Score=29.82 Aligned_cols=26 Identities=19% Similarity=0.144 Sum_probs=20.2
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCchhh
Q 039436 13 LLQLSRLVLSYNIPVHYVGSAVHNRQA 39 (422)
Q Consensus 13 ~l~La~~L~~~Gh~Vt~~t~~~~~~~~ 39 (422)
+-.|+++|+ .+++|++++++..+.-.
T Consensus 16 i~aL~~al~-~~~dV~VVAP~~~qSg~ 41 (252)
T COG0496 16 IRALARALR-EGADVTVVAPDREQSGA 41 (252)
T ss_pred HHHHHHHHh-hCCCEEEEccCCCCccc
Confidence 346778887 99999999998765444
No 164
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=50.82 E-value=1.5e+02 Score=24.98 Aligned_cols=73 Identities=10% Similarity=0.155 Sum_probs=41.5
Q ss_pred cccceeecCC------hhhHHHHHhcCCcEEccCcccc---------h-hhHHHHH-HhhcCeEEEEeeccccccccCHH
Q 039436 342 STGGFMSHCG------WNSCMESITMGVPIVAWPMHSD---------Q-PRNTLLI-THLLKLGLVMADWARRDEIVTSN 404 (422)
Q Consensus 342 ~~~~~i~HgG------~~s~~eal~~GvP~v~~P~~~D---------q-~~na~~~-~~~~g~g~~~~~~~~~~~~~~~~ 404 (422)
...++++|.| .+++.+|...++|+|++--..+ | ..+...+ ....+....+. ...--.+
T Consensus 64 ~~~v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g~~~~~~~~~~~~q~~~d~~~~~~~~~k~~~~v~-----~~~~~~~ 138 (172)
T PF02776_consen 64 RPGVVIVTSGPGATNALTGLANAYADRIPVLVITGQRPSAGEGRGAFQQEIDQQSLFRPVTKWSYRVT-----SPDDLPE 138 (172)
T ss_dssp SEEEEEEETTHHHHTTHHHHHHHHHTT-EEEEEEEESSGGGTTTTSTTSSTHHHHHHGGGSSEEEEEC-----SGGGHHH
T ss_pred cceEEEeecccchHHHHHHHhhcccceeeEEEEecccchhhhcccccccchhhcchhccccchhcccC-----CHHHHHH
Confidence 3567888887 4478889999999999864211 2 2233333 33223344454 2233466
Q ss_pred HHHHHHHHHhcCCcc
Q 039436 405 VIENAVKRLMASKEG 419 (422)
Q Consensus 405 ~l~~av~~~l~~~~~ 419 (422)
.+.+|++.....+.+
T Consensus 139 ~~~~A~~~a~~~~~g 153 (172)
T PF02776_consen 139 ALDRAFRAATSGRPG 153 (172)
T ss_dssp HHHHHHHHHHHCSTS
T ss_pred HHHHHHHHhccCCCc
Confidence 777777766444443
No 165
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=50.20 E-value=62 Score=31.09 Aligned_cols=98 Identities=4% Similarity=0.052 Sum_probs=58.5
Q ss_pred CcceEEecCCc---ccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCC-eEEeccc--
Q 039436 259 NSVLYVSFGTT---TAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKG-LVVRDWA-- 332 (422)
Q Consensus 259 ~~vv~vs~Gs~---~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~-~~~~~~~-- 332 (422)
++.|.|..|+. -..+.+.+.++++.|.+.+.++++..++...+. ..-+.+.+...... +...+-.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~---------~~~~~i~~~~~~~~~~~l~g~~sL 253 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDL---------ACVNEIAQGCQTPPVTALAGKTTF 253 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHH---------HHHHHHHHhcCCCccccccCCCCH
Confidence 46677777775 335778899999999877888776544332100 00011222111112 1122222
Q ss_pred -chhhhhhcccccceeecCChhhHHHHHhcCCcEEcc
Q 039436 333 -PQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAW 368 (422)
Q Consensus 333 -pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 368 (422)
.-..++.+ +++||++- -|-++=|.+.|+|.|++
T Consensus 254 ~el~ali~~--a~l~v~nD-SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 254 PELGALIDH--AQLFIGVD-SAPAHIAAAVNTPLICL 287 (352)
T ss_pred HHHHHHHHh--CCEEEecC-CHHHHHHHHcCCCEEEE
Confidence 23446777 77999984 56788888999999876
No 166
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=50.15 E-value=23 Score=35.65 Aligned_cols=75 Identities=13% Similarity=0.124 Sum_probs=47.6
Q ss_pred Eecccchhhhhh-cccccceee---cCChh-hHHHHHhcCCc----EEccCcccchhhHHHHHHhhcCeEEEEeeccccc
Q 039436 328 VRDWAPQLEILA-HCSTGGFMS---HCGWN-SCMESITMGVP----IVAWPMHSDQPRNTLLITHLLKLGLVMADWARRD 398 (422)
Q Consensus 328 ~~~~~pq~~il~-~~~~~~~i~---HgG~~-s~~eal~~GvP----~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~ 398 (422)
+.+++++.++.. ..++++||. +-|+| +++||+++|+| +|+--..+-... ..-|..++
T Consensus 345 ~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~--------~~~g~lv~------ 410 (460)
T cd03788 345 LYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE--------LSGALLVN------ 410 (460)
T ss_pred EeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh--------cCCCEEEC------
Confidence 346777776543 244778874 45655 67999999999 544422221110 12355554
Q ss_pred cccCHHHHHHHHHHHhcCC
Q 039436 399 EIVTSNVIENAVKRLMASK 417 (422)
Q Consensus 399 ~~~~~~~l~~av~~~l~~~ 417 (422)
.-+.+++++++.++++++
T Consensus 411 -p~d~~~la~ai~~~l~~~ 428 (460)
T cd03788 411 -PYDIDEVADAIHRALTMP 428 (460)
T ss_pred -CCCHHHHHHHHHHHHcCC
Confidence 347899999999999865
No 167
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=49.48 E-value=1.3e+02 Score=31.14 Aligned_cols=28 Identities=14% Similarity=0.185 Sum_probs=22.7
Q ss_pred cccceeecCCh------hhHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCGW------NSCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG~------~s~~eal~~GvP~v~~P 369 (422)
..+++++|.|- +++.+|...++|+|++-
T Consensus 76 ~~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 76 KPAVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CCeEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 35678888774 47899999999999984
No 168
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=48.75 E-value=48 Score=29.82 Aligned_cols=99 Identities=11% Similarity=0.159 Sum_probs=51.4
Q ss_pred CCcceEEecCCcc---cCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccc-
Q 039436 258 KNSVLYVSFGTTT---AMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAP- 333 (422)
Q Consensus 258 ~~~vv~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p- 333 (422)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.+++...+.... ....-+.+......+.+.+.+-.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l 174 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQ---------EKEIADQIAAGLQNPVINLAGKTSL 174 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHH---------HHHHHHHHHTTHTTTTEEETTTS-H
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHH---------HHHHHHHHHHhcccceEeecCCCCH
Confidence 4566777777753 457788999999998888665543322210 000001111111112333333222
Q ss_pred --hhhhhhcccccceeecCChhhHHHHHhcCCcEEcc
Q 039436 334 --QLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAW 368 (422)
Q Consensus 334 --q~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 368 (422)
...++.+ ++++|+.- -|.++=|.+.|+|+|++
T Consensus 175 ~e~~ali~~--a~~~I~~D-tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 175 RELAALISR--ADLVIGND-TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHHHHHHHT--SSEEEEES-SHHHHHHHHTT--EEEE
T ss_pred HHHHHHHhc--CCEEEecC-ChHHHHHHHHhCCEEEE
Confidence 3457777 77999885 46788888999999998
No 169
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=46.11 E-value=50 Score=31.66 Aligned_cols=144 Identities=11% Similarity=0.065 Sum_probs=76.8
Q ss_pred CCcceEEecCCc----ccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCC---C-eEEe
Q 039436 258 KNSVLYVSFGTT----TAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDK---G-LVVR 329 (422)
Q Consensus 258 ~~~vv~vs~Gs~----~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~---~-~~~~ 329 (422)
.++.|.|..|+. -..+.+.+.++++.|.+.+.++++.-++.++ ..-+.+.+..... + +.+.
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~-----------~~~~~i~~~~~~~~~~~~~~l~ 247 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDH-----------EAGNEILAALNTEQQAWCRNLA 247 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhH-----------HHHHHHHHhcccccccceeecc
Confidence 456788888774 2357788999999987667776654322221 0111121111111 1 1122
Q ss_pred ccc---chhhhhhcccccceeecCChhhHHHHHhcCCcEEccCccc--chhhHH-----HHHHhhc-CeEEEEeeccc--
Q 039436 330 DWA---PQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHS--DQPRNT-----LLITHLL-KLGLVMADWAR-- 396 (422)
Q Consensus 330 ~~~---pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~--Dq~~na-----~~~~~~~-g~g~~~~~~~~-- 396 (422)
+-. .-..++.+ +++||+. --|-++=|.+.|+|+|++ ++ +-..++ .++.... +..-.-...+.
T Consensus 248 g~~sL~el~ali~~--a~l~I~n-DTGp~HlAaA~g~P~val--fGpt~p~~~~P~~~~~~vi~~~~~~~~~~~~~c~~~ 322 (348)
T PRK10916 248 GETQLEQAVILIAA--CKAIVTN-DSGLMHVAAALNRPLVAL--YGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAAEG 322 (348)
T ss_pred CCCCHHHHHHHHHh--CCEEEec-CChHHHHHHHhCCCEEEE--ECCCCccccCCCCCCeEEEEccCCcccccCCCCCCc
Confidence 221 23347777 7799987 457788888999999976 22 111110 1111100 00000000000
Q ss_pred ---cccccCHHHHHHHHHHHhcCC
Q 039436 397 ---RDEIVTSNVIENAVKRLMASK 417 (422)
Q Consensus 397 ---~~~~~~~~~l~~av~~~l~~~ 417 (422)
-...++.++|.++++++|.++
T Consensus 323 ~~~cm~~I~~~~V~~~~~~ll~~~ 346 (348)
T PRK10916 323 YHQSLIDITPQRVLEELNALLLQE 346 (348)
T ss_pred hhhhhhhCCHHHHHHHHHHHhhcc
Confidence 134589999999999999864
No 170
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=45.85 E-value=3e+02 Score=27.00 Aligned_cols=64 Identities=25% Similarity=0.342 Sum_probs=37.2
Q ss_pred ceeecCChhhHHHHHhcCCcEEc--cCcccch------hhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcC
Q 039436 345 GFMSHCGWNSCMESITMGVPIVA--WPMHSDQ------PRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMAS 416 (422)
Q Consensus 345 ~~i~HgG~~s~~eal~~GvP~v~--~P~~~Dq------~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~ 416 (422)
++-|+ |..++..|+.+|.|.-. ++.++|- -.|+.++.+..-..+. .++.+++..+|.++++|
T Consensus 247 GVEt~-~a~~f~~sl~~g~~V~lp~i~s~AdglaV~~Vg~~tf~~a~~~~d~vv---------vV~~~ei~aaI~~l~ed 316 (457)
T KOG1250|consen 247 GVETE-GAHSFNASLKAGKPVTLPKITSLADGLAVKTVGENTFELAQKLVDRVV---------VVEDDEIAAAILRLFED 316 (457)
T ss_pred EEeec-CcHHHHHHHhcCCeeecccccchhcccccchhhHHHHHHHHhcCceEE---------EeccHHHHHHHHHHHHh
Confidence 44444 56777778888777531 1112231 2344444442222222 46889999999999998
Q ss_pred Cc
Q 039436 417 KE 418 (422)
Q Consensus 417 ~~ 418 (422)
++
T Consensus 317 ek 318 (457)
T KOG1250|consen 317 EK 318 (457)
T ss_pred hh
Confidence 75
No 171
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=45.46 E-value=20 Score=28.65 Aligned_cols=23 Identities=13% Similarity=-0.032 Sum_probs=18.1
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCC
Q 039436 13 LLQLSRLVLSYNIPVHYVGSAVH 35 (422)
Q Consensus 13 ~l~La~~L~~~Gh~Vt~~t~~~~ 35 (422)
.+.|.++.++|||+|.++...+.
T Consensus 20 T~alm~eAq~RGhev~~~~~~dL 42 (119)
T PF02951_consen 20 TFALMLEAQRRGHEVFYYEPGDL 42 (119)
T ss_dssp HHHHHHHHHHTT-EEEEE-GGGE
T ss_pred HHHHHHHHHHCCCEEEEEEcCcE
Confidence 57889999999999999998763
No 172
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=45.35 E-value=1.3e+02 Score=31.24 Aligned_cols=28 Identities=14% Similarity=0.355 Sum_probs=22.8
Q ss_pred cccceeecCChh------hHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCGWN------SCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG~~------s~~eal~~GvP~v~~P 369 (422)
..+++++|.|-| .+.+|...++|+|++-
T Consensus 78 ~~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 78 KPGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 356888888855 6889999999999983
No 173
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=45.26 E-value=36 Score=29.11 Aligned_cols=70 Identities=20% Similarity=0.237 Sum_probs=41.2
Q ss_pred hcccccceeecCChhhHHHHHhcCCcEEccCccc-c----------------------hhhHHHHHHhhcCeEEEEeecc
Q 039436 339 AHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHS-D----------------------QPRNTLLITHLLKLGLVMADWA 395 (422)
Q Consensus 339 ~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~-D----------------------q~~na~~~~~~~g~g~~~~~~~ 395 (422)
.+..++++|++||...+..... ++|+|-++..+ | ...+...+.+.+|+-+..-.
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i~~~~-- 107 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDIKIYP-- 107 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EEEEEE--
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCceEEEE--
Confidence 4567999999999999998877 99999999854 3 22223444444444433321
Q ss_pred ccccccCHHHHHHHHHHHhc
Q 039436 396 RRDEIVTSNVIENAVKRLMA 415 (422)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~ 415 (422)
--+.+++...|+++..
T Consensus 108 ----~~~~~e~~~~i~~~~~ 123 (176)
T PF06506_consen 108 ----YDSEEEIEAAIKQAKA 123 (176)
T ss_dssp ----ESSHHHHHHHHHHHHH
T ss_pred ----ECCHHHHHHHHHHHHH
Confidence 3457777777777654
No 174
>PF09001 DUF1890: Domain of unknown function (DUF1890); InterPro: IPR012033 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. The structure of the Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) protein has been determined but no evidence as to the function is available yet.; PDB: 1KJN_B.
Probab=45.24 E-value=13 Score=30.16 Aligned_cols=30 Identities=20% Similarity=0.123 Sum_probs=25.6
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCchhhhhh
Q 039436 13 LLQLSRLVLSYNIPVHYVGSAVHNRQAQVR 42 (422)
Q Consensus 13 ~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~ 42 (422)
.|-|+..|.++||+|+++.++...+.++-+
T Consensus 16 alYl~~~Lk~~G~~v~Va~npAA~kLl~va 45 (139)
T PF09001_consen 16 ALYLSYKLKKKGFEVVVAGNPAALKLLEVA 45 (139)
T ss_dssp HHHHHHHHHCTTEEEEEEE-HHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEecCHHHHhHhhhc
Confidence 577899999999999999999988888765
No 175
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=44.27 E-value=1.5e+02 Score=22.90 Aligned_cols=83 Identities=11% Similarity=0.101 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCCCCCcchhh
Q 039436 9 HLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACKFPSHIIPC 88 (422)
Q Consensus 9 Hv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (422)
+=.=++.+++.|.+.|+++ ++++...+.++.. |+....+..+. .
T Consensus 11 ~k~~~~~~~~~l~~~G~~l--~aT~gT~~~l~~~--------------gi~~~~v~~~~------~-------------- 54 (110)
T cd01424 11 DKPEAVEIAKRLAELGFKL--VATEGTAKYLQEA--------------GIPVEVVNKVS------E-------------- 54 (110)
T ss_pred cHhHHHHHHHHHHHCCCEE--EEchHHHHHHHHc--------------CCeEEEEeecC------C--------------
Confidence 3345789999999999987 4566666677665 77765553111 0
Q ss_pred HHHhhhchHHHHHHHHHhccCCCeeEEEEcCC-------chhHHHHHhhCCCCceEE
Q 039436 89 CEASKHLRHPLATLLNTLSATARRVVVIHDSL-------MASVIQDVCLIPNAESYT 138 (422)
Q Consensus 89 ~~~~~~~~~~~~~~l~~l~~~~~~d~VI~D~~-------~~~~~~vA~~l~GIP~v~ 138 (422)
..+.+.++++ ..+.|+||.-.. ..+-...|-+. |||+++
T Consensus 55 ------~~~~i~~~i~----~~~id~vIn~~~~~~~~~~~~~iRR~Av~~-~ipl~T 100 (110)
T cd01424 55 ------GRPNIVDLIK----NGEIQLVINTPSGKRAIRDGFSIRRAALEY-KVPYFT 100 (110)
T ss_pred ------CchhHHHHHH----cCCeEEEEECCCCCccCccHHHHHHHHHHh-CCCEEe
Confidence 0112223332 246778876321 34566788999 999984
No 176
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=44.21 E-value=25 Score=27.70 Aligned_cols=33 Identities=18% Similarity=0.123 Sum_probs=28.5
Q ss_pred cccCCccCHHHHHHHHHHHHhCCCcEEEEeCCC
Q 039436 2 VPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAV 34 (422)
Q Consensus 2 vp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~ 34 (422)
.+.++..|.....-++..|.++|++|...-...
T Consensus 5 ~~~~~e~H~lG~~~~~~~l~~~G~~V~~lg~~~ 37 (119)
T cd02067 5 ATVGGDGHDIGKNIVARALRDAGFEVIDLGVDV 37 (119)
T ss_pred EeeCCchhhHHHHHHHHHHHHCCCEEEECCCCC
Confidence 467889999999999999999999998776543
No 177
>PRK08322 acetolactate synthase; Reviewed
Probab=42.30 E-value=1.4e+02 Score=30.71 Aligned_cols=28 Identities=25% Similarity=0.296 Sum_probs=23.2
Q ss_pred cccceeecCC------hhhHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCG------WNSCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG------~~s~~eal~~GvP~v~~P 369 (422)
+.+++++|.| .+.+.+|...++|+|++-
T Consensus 63 ~~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 63 KAGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CCEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 4668888887 448899999999999984
No 178
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=41.68 E-value=1.6e+02 Score=30.57 Aligned_cols=28 Identities=14% Similarity=0.253 Sum_probs=23.1
Q ss_pred cccceeecCC------hhhHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCG------WNSCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG------~~s~~eal~~GvP~v~~P 369 (422)
..+++++|.| .+.+.+|.+.++|+|++-
T Consensus 63 ~~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 63 KVGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 3568888887 458899999999999983
No 179
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=41.32 E-value=1.7e+02 Score=26.78 Aligned_cols=24 Identities=4% Similarity=0.062 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCc
Q 039436 13 LLQLSRLVLSYNIPVHYVGSAVHN 36 (422)
Q Consensus 13 ~l~La~~L~~~Gh~Vt~~t~~~~~ 36 (422)
--.|+++|.++||+|+..+...+.
T Consensus 12 gr~la~~L~~~g~~v~~s~~t~~~ 35 (256)
T TIGR00715 12 SRAIAKGLIAQGIEILVTVTTSEG 35 (256)
T ss_pred HHHHHHHHHhCCCeEEEEEccCCc
Confidence 467899999999999887776653
No 180
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=41.26 E-value=32 Score=29.67 Aligned_cols=26 Identities=23% Similarity=0.197 Sum_probs=24.6
Q ss_pred CccCHHHHHHHHHHHHhCCCcEEEEe
Q 039436 6 AQGHLNQLLQLSRLVLSYNIPVHYVG 31 (422)
Q Consensus 6 ~~GHv~P~l~La~~L~~~Gh~Vt~~t 31 (422)
..|+-..+..|++.|.++||+|++++
T Consensus 12 ~~G~~~~~~~l~~~L~~~g~~v~v~~ 37 (229)
T cd01635 12 GGGVELVLLDLAKALARRGHEVEVVA 37 (229)
T ss_pred CCCchhHHHHHHHHHHHcCCeEEEEE
Confidence 66999999999999999999999998
No 181
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=41.16 E-value=81 Score=29.78 Aligned_cols=78 Identities=22% Similarity=0.366 Sum_probs=56.1
Q ss_pred Eecccc---hhhhhhcccccceeec--CChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccC
Q 039436 328 VRDWAP---QLEILAHCSTGGFMSH--CGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVT 402 (422)
Q Consensus 328 ~~~~~p---q~~il~~~~~~~~i~H--gG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~ 402 (422)
+.+++| +..+|+++.++.|+|+ =|.|++.-.+..|+|.++- -+-+.|....+ .|+-+-.+ .+.++
T Consensus 211 L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~---r~n~fwqdl~e--~gv~Vlf~-----~d~L~ 280 (322)
T PRK02797 211 LTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLS---RDNPFWQDLTE--QGLPVLFT-----GDDLD 280 (322)
T ss_pred hhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEe---cCCchHHHHHh--CCCeEEec-----CCccc
Confidence 335554 7779999777777765 4899999999999999986 55566666553 47777555 55678
Q ss_pred HHHHHHHHHHHhc
Q 039436 403 SNVIENAVKRLMA 415 (422)
Q Consensus 403 ~~~l~~av~~~l~ 415 (422)
...++++=+++..
T Consensus 281 ~~~v~e~~rql~~ 293 (322)
T PRK02797 281 EDIVREAQRQLAS 293 (322)
T ss_pred HHHHHHHHHHHHh
Confidence 8888777555444
No 182
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=40.89 E-value=1.8e+02 Score=25.19 Aligned_cols=36 Identities=11% Similarity=0.133 Sum_probs=24.1
Q ss_pred CccCHHHHHHHHHHHHhC--CCcEEEEeCCC-Cchhhhh
Q 039436 6 AQGHLNQLLQLSRLVLSY--NIPVHYVGSAV-HNRQAQV 41 (422)
Q Consensus 6 ~~GHv~P~l~La~~L~~~--Gh~Vt~~t~~~-~~~~~~~ 41 (422)
+.|-++-...|+++|.++ |+.|.+-++.. -.+.++.
T Consensus 30 SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~ 68 (186)
T PF04413_consen 30 SVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARK 68 (186)
T ss_dssp SHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHG
T ss_pred CHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHH
Confidence 457888999999999987 88887777643 3333433
No 183
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=40.51 E-value=28 Score=30.23 Aligned_cols=21 Identities=10% Similarity=0.031 Sum_probs=17.1
Q ss_pred HHHHHHHHhCCCcEEEEeCCC
Q 039436 14 LQLSRLVLSYNIPVHYVGSAV 34 (422)
Q Consensus 14 l~La~~L~~~Gh~Vt~~t~~~ 34 (422)
..||+++..+|++||+++.+.
T Consensus 33 ~~lA~~~~~~Ga~V~li~g~~ 53 (185)
T PF04127_consen 33 AALAEEAARRGAEVTLIHGPS 53 (185)
T ss_dssp HHHHHHHHHTT-EEEEEE-TT
T ss_pred HHHHHHHHHCCCEEEEEecCc
Confidence 578999999999999999885
No 184
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=39.80 E-value=23 Score=32.21 Aligned_cols=21 Identities=10% Similarity=-0.004 Sum_probs=16.9
Q ss_pred HHHHHHHHhCCCcEEEEeCCC
Q 039436 14 LQLSRLVLSYNIPVHYVGSAV 34 (422)
Q Consensus 14 l~La~~L~~~Gh~Vt~~t~~~ 34 (422)
=.|+++|+++||+|+++++..
T Consensus 23 ~~L~kaL~~~G~~V~Vi~P~y 43 (245)
T PF08323_consen 23 GSLPKALAKQGHDVRVIMPKY 43 (245)
T ss_dssp HHHHHHHHHTT-EEEEEEE-T
T ss_pred HHHHHHHHhcCCeEEEEEccc
Confidence 368999999999999999764
No 185
>PRK06270 homoserine dehydrogenase; Provisional
Probab=39.73 E-value=2.6e+02 Score=26.77 Aligned_cols=58 Identities=12% Similarity=0.198 Sum_probs=36.2
Q ss_pred chhhhhhcccccceee------cCC---hhhHHHHHhcCCcEEc---cCcccchhhHHHHHHhhcCeEEEE
Q 039436 333 PQLEILAHCSTGGFMS------HCG---WNSCMESITMGVPIVA---WPMHSDQPRNTLLITHLLKLGLVM 391 (422)
Q Consensus 333 pq~~il~~~~~~~~i~------HgG---~~s~~eal~~GvP~v~---~P~~~Dq~~na~~~~~~~g~g~~~ 391 (422)
....+|.++.++++|- |+| ..-+.+|+.+|++.|+ -|+...-..- ..+++..|+.+..
T Consensus 80 d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL-~~~A~~~g~~~~~ 149 (341)
T PRK06270 80 SGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKEL-KELAKKNGVRFRY 149 (341)
T ss_pred CHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHH-HHHHHHcCCEEEE
Confidence 5566777777777776 543 4566899999999999 4764422222 2222324666554
No 186
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=38.33 E-value=32 Score=30.12 Aligned_cols=27 Identities=11% Similarity=0.115 Sum_probs=21.7
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCchhh
Q 039436 13 LLQLSRLVLSYNIPVHYVGSAVHNRQA 39 (422)
Q Consensus 13 ~l~La~~L~~~Gh~Vt~~t~~~~~~~~ 39 (422)
+..|+++|.+.||+|+++++...+.-.
T Consensus 16 i~aL~~~L~~~g~~V~VvAP~~~~Sg~ 42 (196)
T PF01975_consen 16 IRALAKALSALGHDVVVVAPDSEQSGT 42 (196)
T ss_dssp HHHHHHHHTTTSSEEEEEEESSSTTTS
T ss_pred HHHHHHHHHhcCCeEEEEeCCCCCcCc
Confidence 457899998888999999998765443
No 187
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=37.89 E-value=58 Score=28.23 Aligned_cols=38 Identities=13% Similarity=0.071 Sum_probs=26.3
Q ss_pred HHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEec
Q 039436 15 QLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFE 64 (422)
Q Consensus 15 ~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~ 64 (422)
.|+..|+++||+||+++.......-... ..|++...++
T Consensus 25 ~L~~~l~~~g~~v~Vyc~~~~~~~~~~~------------y~gv~l~~i~ 62 (185)
T PF09314_consen 25 ELAPRLVSKGIDVTVYCRSDYYPYKEFE------------YNGVRLVYIP 62 (185)
T ss_pred HHHHHHhcCCceEEEEEccCCCCCCCcc------------cCCeEEEEeC
Confidence 5888999999999999876543221111 2488888875
No 188
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=37.77 E-value=2.3e+02 Score=29.78 Aligned_cols=27 Identities=19% Similarity=0.231 Sum_probs=22.9
Q ss_pred cccceeecCC------hhhHHHHHhcCCcEEcc
Q 039436 342 STGGFMSHCG------WNSCMESITMGVPIVAW 368 (422)
Q Consensus 342 ~~~~~i~HgG------~~s~~eal~~GvP~v~~ 368 (422)
+.+++++|.| .+++++|...++|+|++
T Consensus 85 k~gv~~~t~GPG~~n~l~gl~~A~~d~~Pvl~i 117 (616)
T PRK07418 85 KVGVCFGTSGPGATNLVTGIATAQMDSVPMVVI 117 (616)
T ss_pred CCeEEEECCCccHHHHHHHHHHHHhcCCCEEEE
Confidence 3668888888 55889999999999998
No 189
>cd01421 IMPCH Inosine monophosphate cyclohydrolase domain. This is the N-terminal domain in the purine biosynthesis pathway protein ATIC (purH). The bifunctional ATIC protein contains a C-terminal ATIC formylase domain that formylates 5-aminoimidazole-4-carboxamide-ribonucleotide. The IMPCH domain then converts the formyl-5-aminoimidazole-4-carboxamide-ribonucleotide to inosine monophosphate. This is the final step in de novo purine production.
Probab=37.21 E-value=1.6e+02 Score=25.50 Aligned_cols=36 Identities=8% Similarity=0.249 Sum_probs=28.3
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEec
Q 039436 13 LLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFE 64 (422)
Q Consensus 13 ~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~ 64 (422)
++.||+.|.+.|+++ ++|....+.++.. |+.+..+.
T Consensus 13 l~~lAk~L~~lGf~I--~AT~GTAk~L~e~--------------GI~v~~V~ 48 (187)
T cd01421 13 LVEFAKELVELGVEI--LSTGGTAKFLKEA--------------GIPVTDVS 48 (187)
T ss_pred HHHHHHHHHHCCCEE--EEccHHHHHHHHc--------------CCeEEEhh
Confidence 578999999999987 4667777788776 77776664
No 190
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=36.97 E-value=2.4e+02 Score=29.40 Aligned_cols=28 Identities=14% Similarity=0.149 Sum_probs=23.2
Q ss_pred cccceeecCCh------hhHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCGW------NSCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG~------~s~~eal~~GvP~v~~P 369 (422)
+.+++++|.|- +.+.+|...++|+|++-
T Consensus 68 ~~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 68 RMGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CCEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 46688898884 47888999999999995
No 191
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=36.27 E-value=72 Score=29.70 Aligned_cols=30 Identities=20% Similarity=0.411 Sum_probs=26.0
Q ss_pred ccCcHHHHHHHHHHHhhCCCeeEEEEecCC
Q 039436 270 TAMSDEQIKELAVGLKQSNQKFIWVLRDAD 299 (422)
Q Consensus 270 ~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~ 299 (422)
+..+.+..+++.+++.+...+.||.++++.
T Consensus 44 a~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~ 73 (282)
T cd07025 44 AGTDEERAADLNAAFADPEIKAIWCARGGY 73 (282)
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEcCCcC
Confidence 455677899999999999999999999875
No 192
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=36.07 E-value=3e+02 Score=24.11 Aligned_cols=29 Identities=17% Similarity=0.159 Sum_probs=24.9
Q ss_pred CeeEEEEcCCchhHHHHHhhCCCCceEEee
Q 039436 111 RRVVVIHDSLMASVIQDVCLIPNAESYTFH 140 (422)
Q Consensus 111 ~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~ 140 (422)
+..+||+|-.-..+..-|++. |||.+.+.
T Consensus 29 ~i~~Visd~~~A~~lerA~~~-gIpt~~~~ 57 (200)
T COG0299 29 EIVAVISDKADAYALERAAKA-GIPTVVLD 57 (200)
T ss_pred EEEEEEeCCCCCHHHHHHHHc-CCCEEEec
Confidence 566899999888899999999 99997643
No 193
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=35.49 E-value=40 Score=27.67 Aligned_cols=28 Identities=7% Similarity=-0.034 Sum_probs=21.6
Q ss_pred HHHHHHHhCCCcEEEEeCCCCchhhhhh
Q 039436 15 QLSRLVLSYNIPVHYVGSAVHNRQAQVR 42 (422)
Q Consensus 15 ~La~~L~~~Gh~Vt~~t~~~~~~~~~~~ 42 (422)
-+|..|+++||+|++++.....+.++..
T Consensus 12 ~~a~~L~~~g~~V~l~~r~~~~~~~~~~ 39 (151)
T PF02558_consen 12 LYAARLAQAGHDVTLVSRSPRLEAIKEQ 39 (151)
T ss_dssp HHHHHHHHTTCEEEEEESHHHHHHHHHH
T ss_pred HHHHHHHHCCCceEEEEccccHHhhhhe
Confidence 4788999999999999988733445544
No 194
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated
Probab=35.31 E-value=2.3e+02 Score=29.40 Aligned_cols=28 Identities=14% Similarity=0.232 Sum_probs=23.1
Q ss_pred cccceeecCCh------hhHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCGW------NSCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG~------~s~~eal~~GvP~v~~P 369 (422)
..+++++|.|- +++.+|...++|+|++-
T Consensus 67 ~~gv~~~t~GpG~~n~l~gia~A~~~~~Pvl~i~ 100 (572)
T PRK08979 67 KVGVVLVTSGPGATNTITGIATAYMDSIPMVVLS 100 (572)
T ss_pred CCeEEEECCCchHhHHHHHHHHHhhcCCCEEEEe
Confidence 46688888884 47889999999999984
No 195
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated
Probab=35.15 E-value=2.3e+02 Score=29.27 Aligned_cols=28 Identities=14% Similarity=0.198 Sum_probs=23.2
Q ss_pred cccceeecCC------hhhHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCG------WNSCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG------~~s~~eal~~GvP~v~~P 369 (422)
..+++++|.| .+++.+|...++|+|++-
T Consensus 66 ~~gv~~~t~GpG~~n~~~gla~A~~~~~Pvl~i~ 99 (563)
T PRK08527 66 KVGVAIVTSGPGFTNAVTGLATAYMDSIPLVLIS 99 (563)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3668888888 458899999999999984
No 196
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=34.56 E-value=1.7e+02 Score=27.60 Aligned_cols=33 Identities=9% Similarity=0.318 Sum_probs=28.1
Q ss_pred hhhhcccccceeecCChhhHHHHHhcCCcEEcc
Q 039436 336 EILAHCSTGGFMSHCGWNSCMESITMGVPIVAW 368 (422)
Q Consensus 336 ~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 368 (422)
.++..-.-+++|++++..+..-|-..|+|.+.+
T Consensus 87 ~~l~~~~pDlVi~d~~~~~~~aA~~~~iP~i~i 119 (321)
T TIGR00661 87 NIIREYNPDLIISDFEYSTVVAAKLLKIPVICI 119 (321)
T ss_pred HHHHhcCCCEEEECCchHHHHHHHhcCCCEEEE
Confidence 455555678999999999999999999999965
No 197
>PRK11269 glyoxylate carboligase; Provisional
Probab=34.16 E-value=1.5e+02 Score=30.89 Aligned_cols=27 Identities=15% Similarity=0.266 Sum_probs=22.5
Q ss_pred ccceeecCC------hhhHHHHHhcCCcEEccC
Q 039436 343 TGGFMSHCG------WNSCMESITMGVPIVAWP 369 (422)
Q Consensus 343 ~~~~i~HgG------~~s~~eal~~GvP~v~~P 369 (422)
.+++++|.| .+.+.+|...++|+|++-
T Consensus 69 ~gv~~~t~GPG~~N~l~gl~~A~~~~~Pvl~I~ 101 (591)
T PRK11269 69 IGVCIGTSGPAGTDMITGLYSASADSIPILCIT 101 (591)
T ss_pred cEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 556777777 678999999999999984
No 198
>PRK08266 hypothetical protein; Provisional
Probab=34.16 E-value=2.1e+02 Score=29.42 Aligned_cols=27 Identities=11% Similarity=0.112 Sum_probs=22.3
Q ss_pred ccceeecCCh------hhHHHHHhcCCcEEccC
Q 039436 343 TGGFMSHCGW------NSCMESITMGVPIVAWP 369 (422)
Q Consensus 343 ~~~~i~HgG~------~s~~eal~~GvP~v~~P 369 (422)
.+++++|.|- +++.+|...++|+|++-
T Consensus 69 ~~v~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i~ 101 (542)
T PRK08266 69 PGVCSVVPGPGVLNAGAALLTAYGCNSPVLCLT 101 (542)
T ss_pred CeEEEECCCCcHHHHHHHHHHHHhhCCCEEEEe
Confidence 5577888884 48899999999999983
No 199
>PRK08199 thiamine pyrophosphate protein; Validated
Probab=33.88 E-value=1.7e+02 Score=30.15 Aligned_cols=27 Identities=11% Similarity=0.153 Sum_probs=22.6
Q ss_pred cccceeecCCh------hhHHHHHhcCCcEEcc
Q 039436 342 STGGFMSHCGW------NSCMESITMGVPIVAW 368 (422)
Q Consensus 342 ~~~~~i~HgG~------~s~~eal~~GvP~v~~ 368 (422)
+.+++++|.|- +.+.+|...++|+|++
T Consensus 71 ~~gv~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i 103 (557)
T PRK08199 71 RPGICFVTRGPGATNASIGVHTAFQDSTPMILF 103 (557)
T ss_pred CCEEEEeCCCccHHHHHHHHHHHhhcCCCEEEE
Confidence 36688888884 4788999999999988
No 200
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=33.32 E-value=2e+02 Score=27.19 Aligned_cols=96 Identities=14% Similarity=0.155 Sum_probs=56.9
Q ss_pred CCcceEEecCCc----ccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeE-Eeccc
Q 039436 258 KNSVLYVSFGTT----TAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLV-VRDWA 332 (422)
Q Consensus 258 ~~~vv~vs~Gs~----~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~-~~~~~ 332 (422)
.++.|.+.-|+. -..+.+.+.++++.|.+.+.++|.. ++... ...-+.+.+.... +++ +.+-.
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~e----------~~~~~~i~~~~~~-~~~~l~g~~ 240 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAKD----------HPAGNEIEALLPG-ELRNLAGET 240 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChhh----------HHHHHHHHHhCCc-ccccCCCCC
Confidence 356777777763 2367788999999987767776654 43320 0011122222111 211 11211
Q ss_pred ---chhhhhhcccccceeecCChhhHHHHHhcCCcEEcc
Q 039436 333 ---PQLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAW 368 (422)
Q Consensus 333 ---pq~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 368 (422)
.-..++++ +++||+.- -|-++=|.+.|+|.|++
T Consensus 241 sL~el~ali~~--a~l~I~~D-SGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 241 SLDEAVDLIAL--AKAVVTND-SGLMHVAAALNRPLVAL 276 (334)
T ss_pred CHHHHHHHHHh--CCEEEeeC-CHHHHHHHHcCCCEEEE
Confidence 23457777 77999984 56678888999999976
No 201
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=33.26 E-value=79 Score=26.78 Aligned_cols=31 Identities=13% Similarity=0.325 Sum_probs=24.5
Q ss_pred cCCcceEEecCCcccCcHHHHHHHHHHHhhC
Q 039436 257 EKNSVLYVSFGTTTAMSDEQIKELAVGLKQS 287 (422)
Q Consensus 257 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~ 287 (422)
+.+-.+|+++||......+.++..++.|++.
T Consensus 5 ~~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 5 PASALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred CcCCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 3445699999999877777888888888764
No 202
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=33.02 E-value=1.6e+02 Score=28.95 Aligned_cols=96 Identities=15% Similarity=0.178 Sum_probs=61.1
Q ss_pred CCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCe--EEecccchh
Q 039436 258 KNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGL--VVRDWAPQL 335 (422)
Q Consensus 258 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~--~~~~~~pq~ 335 (422)
+++.|-+| |...+..-+..+.+.|++.|+.++.-...+..+. .+ |+.-..+. -|.+...++
T Consensus 184 ~kp~I~iT---mfGvTTp~V~~~~~~Le~~G~Ev~VFHAtG~GG~-------------aM-E~Li~~G~~~~VlDlTttE 246 (403)
T PF06792_consen 184 DKPLIGIT---MFGVTTPCVDAIRERLEEEGYEVLVFHATGTGGR-------------AM-ERLIREGQFDGVLDLTTTE 246 (403)
T ss_pred CCcEEEEE---CCCCcHHHHHHHHHHHHhcCCeEEEEcCCCCchH-------------HH-HHHHHcCCcEEEEECcHHH
Confidence 45667774 3555667888899999999998875544333111 11 11111121 144666665
Q ss_pred hhhhcccccceeecCChhhHHHHHhcCCcEEccCcccc
Q 039436 336 EILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSD 373 (422)
Q Consensus 336 ~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~D 373 (422)
..=.. +++ +..+|-+=+-.|...|+|+|+.|=..|
T Consensus 247 l~d~l--~GG-v~sagp~Rl~AA~~~GIP~Vvs~GalD 281 (403)
T PF06792_consen 247 LADEL--FGG-VLSAGPDRLEAAARAGIPQVVSPGALD 281 (403)
T ss_pred HHHHH--hCC-CCCCCchHHHHHHHcCCCEEEecCccc
Confidence 54444 444 777888889999999999999997555
No 203
>COG4081 Uncharacterized protein conserved in archaea [Function unknown]
Probab=32.84 E-value=29 Score=27.81 Aligned_cols=29 Identities=10% Similarity=0.053 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEeCCCCchhh
Q 039436 11 NQLLQLSRLVLSYNIPVHYVGSAVHNRQA 39 (422)
Q Consensus 11 ~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~ 39 (422)
.-.|-++.+|..+|++||++.++...+.+
T Consensus 19 ssaiYls~klkkkgf~v~VaateAa~kLl 47 (148)
T COG4081 19 SSAIYLSHKLKKKGFDVTVAATEAALKLL 47 (148)
T ss_pred hHHHHHHHHhhccCccEEEecCHhhheee
Confidence 34567889999999999999988754444
No 204
>CHL00099 ilvB acetohydroxyacid synthase large subunit
Probab=32.39 E-value=1.8e+02 Score=30.26 Aligned_cols=28 Identities=14% Similarity=0.189 Sum_probs=23.1
Q ss_pred cccceeecCCh------hhHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCGW------NSCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG~------~s~~eal~~GvP~v~~P 369 (422)
+.+++++|.|- +++.+|...++|+|++-
T Consensus 76 ~~gv~~~t~GPG~~N~l~gl~~A~~~~~Pvl~I~ 109 (585)
T CHL00099 76 KVGVCFATSGPGATNLVTGIATAQMDSVPLLVIT 109 (585)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 35688888874 48899999999999995
No 205
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=32.10 E-value=51 Score=23.11 Aligned_cols=21 Identities=10% Similarity=-0.039 Sum_probs=17.7
Q ss_pred HHHHHHHHhCCCcEEEEeCCC
Q 039436 14 LQLSRLVLSYNIPVHYVGSAV 34 (422)
Q Consensus 14 l~La~~L~~~Gh~Vt~~t~~~ 34 (422)
|..|..|+++|++|+++=..+
T Consensus 9 l~aA~~L~~~g~~v~v~E~~~ 29 (68)
T PF13450_consen 9 LAAAYYLAKAGYRVTVFEKND 29 (68)
T ss_dssp HHHHHHHHHTTSEEEEEESSS
T ss_pred HHHHHHHHHCCCcEEEEecCc
Confidence 567899999999999997654
No 206
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=31.57 E-value=1.2e+02 Score=33.06 Aligned_cols=71 Identities=13% Similarity=0.050 Sum_probs=46.0
Q ss_pred ccchhhhhh-cccccceeec---CChh-hHHHHHhcCCc---EEccCcccchhhHHHHHHhhcC-eEEEEeecccccccc
Q 039436 331 WAPQLEILA-HCSTGGFMSH---CGWN-SCMESITMGVP---IVAWPMHSDQPRNTLLITHLLK-LGLVMADWARRDEIV 401 (422)
Q Consensus 331 ~~pq~~il~-~~~~~~~i~H---gG~~-s~~eal~~GvP---~v~~P~~~Dq~~na~~~~~~~g-~g~~~~~~~~~~~~~ 401 (422)
++|+.++.+ ..++++||.- -|+| +++|++++|+| .+++.-++- .+. . +| -|+.+. ..
T Consensus 363 ~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G---~~~---~-l~~~allVn-------P~ 428 (797)
T PLN03063 363 SVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAG---AGQ---S-LGAGALLVN-------PW 428 (797)
T ss_pred CCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcC---chh---h-hcCCeEEEC-------CC
Confidence 455554433 2447788854 4877 67799999999 444443221 111 1 33 467776 45
Q ss_pred CHHHHHHHHHHHhc
Q 039436 402 TSNVIENAVKRLMA 415 (422)
Q Consensus 402 ~~~~l~~av~~~l~ 415 (422)
+.++++++|.++|+
T Consensus 429 D~~~lA~AI~~aL~ 442 (797)
T PLN03063 429 NITEVSSAIKEALN 442 (797)
T ss_pred CHHHHHHHHHHHHh
Confidence 88999999999998
No 207
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed.
Probab=31.51 E-value=2.7e+02 Score=28.68 Aligned_cols=27 Identities=15% Similarity=0.318 Sum_probs=22.6
Q ss_pred ccceeecCC------hhhHHHHHhcCCcEEccC
Q 039436 343 TGGFMSHCG------WNSCMESITMGVPIVAWP 369 (422)
Q Consensus 343 ~~~~i~HgG------~~s~~eal~~GvP~v~~P 369 (422)
.+++++|.| .+.+.+|...++|+|++-
T Consensus 65 ~gv~~~t~GpG~~n~l~~i~~A~~~~~Pvl~i~ 97 (558)
T TIGR00118 65 VGVVLVTSGPGATNLVTGIATAYMDSIPMVVFT 97 (558)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 558888887 458899999999999993
No 208
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This domain is found in methionyl and leucyl tRNA synthetases. ; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 2D5B_A 1A8H_A 1WOY_A 2D54_A 4DLP_A 2CT8_B 2CSX_A 1MED_A 1PFU_A 1PFW_A ....
Probab=31.46 E-value=39 Score=33.22 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=25.4
Q ss_pred ccCHHHHH---HHHHHHHhCCCcEEEEeCCC-Cchhh
Q 039436 7 QGHLNQLL---QLSRLVLSYNIPVHYVGSAV-HNRQA 39 (422)
Q Consensus 7 ~GHv~P~l---~La~~L~~~Gh~Vt~~t~~~-~~~~~ 39 (422)
-||+.|+| .+||.++.+|++|.|++..+ +...+
T Consensus 16 lGH~~~~l~ADv~aR~~r~~G~~v~~~tGtDehG~~i 52 (391)
T PF09334_consen 16 LGHLYPYLAADVLARYLRLRGHDVLFVTGTDEHGSKI 52 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-EEEEEEEEE-SSHHH
T ss_pred CChhHHHHHHHHHHHHHhhcccceeeEEecchhhHHH
Confidence 49999988 58999999999999999754 44333
No 209
>PRK07282 acetolactate synthase catalytic subunit; Reviewed
Probab=31.17 E-value=2.5e+02 Score=29.14 Aligned_cols=28 Identities=14% Similarity=0.304 Sum_probs=23.1
Q ss_pred cccceeecCChh------hHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCGWN------SCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG~~------s~~eal~~GvP~v~~P 369 (422)
+.+++++|.|-| ++.+|.+.++|+|++-
T Consensus 73 ~~gv~~~t~GPG~~n~~~gla~A~~~~~Pvl~i~ 106 (566)
T PRK07282 73 KLGVAVVTSGPGATNAITGIADAMSDSVPLLVFT 106 (566)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 366788888844 6889999999999995
No 210
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated
Probab=31.11 E-value=3e+02 Score=28.54 Aligned_cols=28 Identities=21% Similarity=0.279 Sum_probs=22.9
Q ss_pred cccceeecCChh------hHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCGWN------SCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG~~------s~~eal~~GvP~v~~P 369 (422)
..+++++|.|-| ++.+|...++|+|++-
T Consensus 67 ~~gv~~~t~GpG~~N~l~~i~~A~~~~~Pvlvi~ 100 (574)
T PRK06882 67 KVGCVLVTSGPGATNAITGIATAYTDSVPLVILS 100 (574)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 366788888844 7889999999999984
No 211
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=30.81 E-value=1e+02 Score=29.13 Aligned_cols=30 Identities=23% Similarity=0.262 Sum_probs=25.7
Q ss_pred ccCcHHHHHHHHHHHhhCCCeeEEEEecCC
Q 039436 270 TAMSDEQIKELAVGLKQSNQKFIWVLRDAD 299 (422)
Q Consensus 270 ~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~ 299 (422)
...+.+...++.+++.+...+.||.++++.
T Consensus 48 ag~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 77 (308)
T cd07062 48 SASPEERAEELMAAFADPSIKAIIPTIGGD 77 (308)
T ss_pred cCCHHHHHHHHHHHhcCCCCCEEEECCccc
Confidence 455677899999999999999999998875
No 212
>TIGR00745 apbA_panE 2-dehydropantoate 2-reductase. This model describes enzymes that perform as 2-dehydropantoate 2-reductase, one of four enzymes required for the de novo biosynthesis of pantothenate (vitamin B5) from Asp and 2-oxoisovalerate. Although few members of the seed alignment are characterized experimentally, nearly all from complete genomes are found in a genome-wide (but not local) context of all three other pantothenate-biosynthetic enzymes (TIGR00222, TIGR00018, TIGR00223). The gene encoding this enzyme is designated apbA in Salmonella typhimurium and panE in Escherichia coli; this protein functions as a monomer and functions in the alternative pyrimidine biosynthetic, or APB, pathway, used to synthesize the pyrimidine moiety of thiamine. Note, synthesis of the pyrimidine moiety of thiamine occurs either via the first five steps in de novo purine biosynthesis, which uses the pur gene products, or through the APB pathway. Note that this family includes both NADH and NADPH
Probab=30.71 E-value=45 Score=30.88 Aligned_cols=27 Identities=4% Similarity=-0.070 Sum_probs=20.2
Q ss_pred HHHHHHHhCCCcEEEEeCCCCchhhhh
Q 039436 15 QLSRLVLSYNIPVHYVGSAVHNRQAQV 41 (422)
Q Consensus 15 ~La~~L~~~Gh~Vt~~t~~~~~~~~~~ 41 (422)
-+|..|+++||+|++++-....+.++.
T Consensus 5 ~~a~~L~~~G~~V~l~~r~~~~~~i~~ 31 (293)
T TIGR00745 5 LYGAYLARAGHDVTLLARGEQLEALNQ 31 (293)
T ss_pred HHHHHHHhCCCcEEEEecHHHHHHHHH
Confidence 478899999999999987544444544
No 213
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=30.41 E-value=1.7e+02 Score=24.95 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=23.3
Q ss_pred cccCCccCHHHHHHHHHHH-HhC-CCcEEEEeCCC
Q 039436 2 VPFPAQGHLNQLLQLSRLV-LSY-NIPVHYVGSAV 34 (422)
Q Consensus 2 vp~p~~GHv~P~l~La~~L-~~~-Gh~Vt~~t~~~ 34 (422)
+-.++-||..=|+.|.+.+ .++ .++..+++..+
T Consensus 3 ~v~gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d 37 (170)
T PF08660_consen 3 VVLGSGGHTAEMLRLLKALDNDRYQPRTYIVTEGD 37 (170)
T ss_pred EEEcCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCC
Confidence 3456789999999999999 344 45555555544
No 214
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=30.11 E-value=2.5e+02 Score=22.76 Aligned_cols=33 Identities=15% Similarity=0.549 Sum_probs=26.9
Q ss_pred hhhhhhcccccceeecCC-----hhhHHHH---HhcCCcEEcc
Q 039436 334 QLEILAHCSTGGFMSHCG-----WNSCMES---ITMGVPIVAW 368 (422)
Q Consensus 334 q~~il~~~~~~~~i~HgG-----~~s~~ea---l~~GvP~v~~ 368 (422)
-..++.. ++++|-.-| ||+.++| ++.|+|+|++
T Consensus 66 T~~li~~--aDvVVvrFGekYKQWNaAfDAg~a~AlgKplI~l 106 (141)
T PF11071_consen 66 TRTLIEK--ADVVVVRFGEKYKQWNAAFDAGYAAALGKPLITL 106 (141)
T ss_pred HHHHHhh--CCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEe
Confidence 4556666 789999999 9998886 7789999987
No 215
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=30.11 E-value=74 Score=22.81 Aligned_cols=22 Identities=9% Similarity=0.099 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCCcEEEEeCCC
Q 039436 13 LLQLSRLVLSYNIPVHYVGSAV 34 (422)
Q Consensus 13 ~l~La~~L~~~Gh~Vt~~t~~~ 34 (422)
-+++|..|++.|.+||++....
T Consensus 11 g~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 11 GIELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp HHHHHHHHHHTTSEEEEEESSS
T ss_pred HHHHHHHHHHhCcEEEEEeccc
Confidence 4789999999999999999764
No 216
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=29.94 E-value=53 Score=28.34 Aligned_cols=28 Identities=18% Similarity=0.161 Sum_probs=24.0
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCchhhh
Q 039436 13 LLQLSRLVLSYNIPVHYVGSAVHNRQAQ 40 (422)
Q Consensus 13 ~l~La~~L~~~Gh~Vt~~t~~~~~~~~~ 40 (422)
...|.++|.++|++|.++.|+...+.+.
T Consensus 15 a~~lir~L~~~g~~V~vv~T~~A~~fv~ 42 (181)
T TIGR00421 15 GIRLLEVLKEAGVEVHLVISDWAKETIK 42 (181)
T ss_pred HHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 3689999999999999999998776664
No 217
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=29.78 E-value=4.4e+02 Score=24.45 Aligned_cols=37 Identities=24% Similarity=0.504 Sum_probs=29.1
Q ss_pred cccchhhhhhcccccceeecCC-hhhHHHHHhcCCcEEcc
Q 039436 330 DWAPQLEILAHCSTGGFMSHCG-WNSCMESITMGVPIVAW 368 (422)
Q Consensus 330 ~~~pq~~il~~~~~~~~i~HgG-~~s~~eal~~GvP~v~~ 368 (422)
++=|+...|+. .+.+|.-.. .|.+.||.+.|+|+-+.
T Consensus 234 g~NPY~~~La~--Adyii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 234 GYNPYIDMLAA--ADYIISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred CCCchHHHHhh--cceEEEecchhhhhHHHhccCCCeEEE
Confidence 45589999987 667776555 67889999999998664
No 218
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=29.58 E-value=40 Score=25.43 Aligned_cols=28 Identities=4% Similarity=0.097 Sum_probs=23.0
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCchhhhhh
Q 039436 13 LLQLSRLVLSYNIPVHYVGSAVHNRQAQVR 42 (422)
Q Consensus 13 ~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~ 42 (422)
++.+|++|.+.|| .+++|+...+.+++.
T Consensus 2 ~~~~a~~l~~lG~--~i~AT~gTa~~L~~~ 29 (95)
T PF02142_consen 2 IVPLAKRLAELGF--EIYATEGTAKFLKEH 29 (95)
T ss_dssp HHHHHHHHHHTTS--EEEEEHHHHHHHHHT
T ss_pred HHHHHHHHHHCCC--EEEEChHHHHHHHHc
Confidence 5889999999995 567788777888876
No 219
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated
Probab=29.16 E-value=3.2e+02 Score=28.34 Aligned_cols=28 Identities=18% Similarity=0.299 Sum_probs=23.2
Q ss_pred cccceeecCC------hhhHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCG------WNSCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG------~~s~~eal~~GvP~v~~P 369 (422)
+.+++++|.| .+++.+|...++|+|++-
T Consensus 67 ~~gv~~vt~GPG~~N~l~gl~~A~~~~~Pvl~i~ 100 (574)
T PRK06466 67 KTGVVLVTSGPGATNAITGIATAYMDSIPMVVLS 100 (574)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 3568888888 448899999999999994
No 220
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=29.14 E-value=2.8e+02 Score=23.64 Aligned_cols=47 Identities=11% Similarity=0.168 Sum_probs=30.0
Q ss_pred chHHHHHHHHHhccCCCeeEEEEcCCchhHHHHHhhCCCCceEEeechH
Q 039436 95 LRHPLATLLNTLSATARRVVVIHDSLMASVIQDVCLIPNAESYTFHSVS 143 (422)
Q Consensus 95 ~~~~~~~~l~~l~~~~~~d~VI~D~~~~~~~~vA~~l~GIP~v~~~~~~ 143 (422)
+...++..++++.-..+-.++|-|.++. =...+... |+-+|.+-+..
T Consensus 95 ~~~~fr~Al~~m~l~~~~vvmVGDqL~T-DVlggnr~-G~~tIlV~Pl~ 141 (175)
T COG2179 95 FGRAFRRALKEMNLPPEEVVMVGDQLFT-DVLGGNRA-GMRTILVEPLV 141 (175)
T ss_pred cHHHHHHHHHHcCCChhHEEEEcchhhh-hhhccccc-CcEEEEEEEec
Confidence 4445666666665443344778887664 34556778 99999876543
No 221
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=29.14 E-value=48 Score=30.35 Aligned_cols=38 Identities=13% Similarity=0.230 Sum_probs=31.6
Q ss_pred CCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhh
Q 039436 5 PAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVR 42 (422)
Q Consensus 5 p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~ 42 (422)
|+.|-.+=..++|.+|.++|+.|+|++.++....+...
T Consensus 114 ~G~GKThLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~~ 151 (254)
T COG1484 114 PGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKAA 151 (254)
T ss_pred CCCcHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHH
Confidence 45667777899999999899999999999877777654
No 222
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=28.98 E-value=2.1e+02 Score=25.74 Aligned_cols=102 Identities=12% Similarity=0.037 Sum_probs=54.6
Q ss_pred CccCHHHHHHHHHHHHhCCCcEEEEeCCC---CchhhhhhccCCCCCccCCCCCCeEEEEecCCCCCCCCCCCCCCCCCC
Q 039436 6 AQGHLNQLLQLSRLVLSYNIPVHYVGSAV---HNRQAQVRVHGWDPLDVSSNNNNIHFHDFEIPPYPCPPPNPNAACKFP 82 (422)
Q Consensus 6 ~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~---~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~~~~~~~~~~~~~~~~~~~ 82 (422)
+-|-..-.-.|+.+|+.+|+.|.++-.+- +.+.+-.. + ..+-|--+..-.+......+.-....-
T Consensus 13 GVGKTTttAnig~aLA~~GkKv~liD~DiGLRNLDlimGl------E------~RiVYd~vdVi~g~~~l~QALIkDKr~ 80 (272)
T COG2894 13 GVGKTTTTANIGTALAQLGKKVVLIDFDIGLRNLDLIMGL------E------NRIVYDLVDVIEGEATLNQALIKDKRL 80 (272)
T ss_pred CcCccchhHHHHHHHHHcCCeEEEEecCcCchhhhhhhcc------c------ceeeeeehhhhcCccchhhHhhccccC
Confidence 55777778899999999999999998773 44444222 1 123332222112211111110000000
Q ss_pred Ccch--h--hHHH-hhhchHHHHHHHHHhccCCCeeEEEEcCC
Q 039436 83 SHII--P--CCEA-SKHLRHPLATLLNTLSATARRVVVIHDSL 120 (422)
Q Consensus 83 ~~~~--~--~~~~-~~~~~~~~~~~l~~l~~~~~~d~VI~D~~ 120 (422)
.++. + ..+. .....+.+..++.++.+ ..+|.||.|+-
T Consensus 81 ~nL~lLPAsQtrdKdalt~E~v~~vv~eL~~-~~fDyIi~DsP 122 (272)
T COG2894 81 ENLFLLPASQTRDKDALTPEGVKKVVNELKA-MDFDYIIIDSP 122 (272)
T ss_pred CceEecccccccCcccCCHHHHHHHHHHHHh-cCCCEEEecCc
Confidence 0110 0 1111 23455678888888877 58999999964
No 223
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=28.93 E-value=2.1e+02 Score=25.00 Aligned_cols=106 Identities=15% Similarity=0.161 Sum_probs=65.5
Q ss_pred cHHHHHH-HHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhhhhcccccceeecCC
Q 039436 273 SDEQIKE-LAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCG 351 (422)
Q Consensus 273 ~~~~~~~-~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG 351 (422)
+.+.+.. +++.|+..+..+|...|.- ..|.+.|.++...+-+-+ ||| +.=.++|
T Consensus 63 ~r~~~d~~l~~~l~~~~~dlvvLAGyM------------rIL~~~fl~~~~grIlNI-----------HPS--LLP~f~G 117 (200)
T COG0299 63 SREAFDRALVEALDEYGPDLVVLAGYM------------RILGPEFLSRFEGRILNI-----------HPS--LLPAFPG 117 (200)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcchH------------HHcCHHHHHHhhcceEec-----------Ccc--cccCCCC
Confidence 4555555 8999999998887665542 246677777776543333 455 5556889
Q ss_pred hhhHHHHHhcCCcEEccCcc-cc-hhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHH
Q 039436 352 WNSCMESITMGVPIVAWPMH-SD-QPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKR 412 (422)
Q Consensus 352 ~~s~~eal~~GvP~v~~P~~-~D-q~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~ 412 (422)
..+..+|+.+|+..-.+-.. .| ..+-+--+.+ ..+.+. . .-|.|+|.+.|.+
T Consensus 118 ~h~~~~A~~aG~k~sG~TVH~V~e~vD~GpII~Q---~~Vpv~-----~-~Dt~etl~~RV~~ 171 (200)
T COG0299 118 LHAHEQALEAGVKVSGCTVHFVTEGVDTGPIIAQ---AAVPVL-----P-GDTAETLEARVLE 171 (200)
T ss_pred chHHHHHHHcCCCccCcEEEEEccCCCCCCeEEE---Eeeeec-----C-CCCHHHHHHHHHH
Confidence 99999999999997655532 22 2333333322 122232 1 2278888777754
No 224
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated
Probab=28.82 E-value=2.7e+02 Score=28.85 Aligned_cols=28 Identities=14% Similarity=0.256 Sum_probs=22.7
Q ss_pred cccceeecCChh------hHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCGWN------SCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG~~------s~~eal~~GvP~v~~P 369 (422)
..+++++|.|-| .+.+|.+.++|+|++-
T Consensus 77 ~~gv~~~t~GpG~~N~~~gla~A~~~~~Pvl~I~ 110 (570)
T PRK06725 77 KVGVVFATSGPGATNLVTGLADAYMDSIPLVVIT 110 (570)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCcCEEEEe
Confidence 366888888855 6789999999999983
No 225
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=28.71 E-value=2.4e+02 Score=24.08 Aligned_cols=31 Identities=13% Similarity=0.101 Sum_probs=25.2
Q ss_pred CCccCHHHHHHHHHHHHhCCCcEEEEeCCCC
Q 039436 5 PAQGHLNQLLQLSRLVLSYNIPVHYVGSAVH 35 (422)
Q Consensus 5 p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~ 35 (422)
|+.|-..=.+.++..|.+.|+.|-=+.++.-
T Consensus 14 PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EV 44 (179)
T COG1618 14 PGVGKTTLVLKIAEKLREKGYKVGGFITPEV 44 (179)
T ss_pred CCccHHHHHHHHHHHHHhcCceeeeEEeeee
Confidence 6788888899999999999999975544543
No 226
>PRK00654 glgA glycogen synthase; Provisional
Probab=28.71 E-value=71 Score=32.11 Aligned_cols=31 Identities=16% Similarity=0.223 Sum_probs=22.7
Q ss_pred ccCCccCHHHH-HHHHHHHHhCCCcEEEEeCC
Q 039436 3 PFPAQGHLNQL-LQLSRLVLSYNIPVHYVGSA 33 (422)
Q Consensus 3 p~p~~GHv~P~-l~La~~L~~~Gh~Vt~~t~~ 33 (422)
|+.-.|=+.-+ -.|+++|+++||+|+++++.
T Consensus 12 P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~ 43 (466)
T PRK00654 12 PLIKTGGLGDVVGALPKALAALGHDVRVLLPG 43 (466)
T ss_pred cCcccCcHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 44334444443 57999999999999999965
No 227
>TIGR03646 YtoQ_fam YtoQ family protein. Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=28.58 E-value=2.5e+02 Score=22.86 Aligned_cols=34 Identities=15% Similarity=0.528 Sum_probs=26.9
Q ss_pred chhhhhhcccccceeecCC-----hhhHHHH---HhcCCcEEcc
Q 039436 333 PQLEILAHCSTGGFMSHCG-----WNSCMES---ITMGVPIVAW 368 (422)
Q Consensus 333 pq~~il~~~~~~~~i~HgG-----~~s~~ea---l~~GvP~v~~ 368 (422)
--..++.. ++.+|-.-| ||+.++| ++.|+|+|++
T Consensus 68 RT~~li~~--aDvvVvrFGekYKQWNaAfDAg~aaAlgKplI~l 109 (144)
T TIGR03646 68 RTRKLIEK--ADVVIALFGEKYKQWNAAFDAGYAAALGKPLIIL 109 (144)
T ss_pred HHHHHHhh--CCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEe
Confidence 34556666 778888888 9998876 7789999987
No 228
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=28.54 E-value=48 Score=29.04 Aligned_cols=33 Identities=6% Similarity=-0.075 Sum_probs=25.4
Q ss_pred ccCHHH-HHHHHHHHHhCCCcEEEEeCCCCchhh
Q 039436 7 QGHLNQ-LLQLSRLVLSYNIPVHYVGSAVHNRQA 39 (422)
Q Consensus 7 ~GHv~P-~l~La~~L~~~Gh~Vt~~t~~~~~~~~ 39 (422)
.....- .+.|.+.|.++|++|+++.|+...+.+
T Consensus 15 siaa~k~a~~lir~L~k~G~~V~vv~T~aA~~~~ 48 (196)
T PRK08305 15 SHCTYDEVMPEIEKLVDEGAEVTPIVSYTVQTTD 48 (196)
T ss_pred HHHHHHHHHHHHHHHHhCcCEEEEEECHhHHHHh
Confidence 334455 489999999999999999988755443
No 229
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=28.51 E-value=3.8e+02 Score=26.70 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=23.9
Q ss_pred CCccCHHHHHHHHHHHHhCCCcEE-EEeCCCC
Q 039436 5 PAQGHLNQLLQLSRLVLSYNIPVH-YVGSAVH 35 (422)
Q Consensus 5 p~~GHv~P~l~La~~L~~~Gh~Vt-~~t~~~~ 35 (422)
-+.|-..=.+.|.++|++||++|. |=+.|+|
T Consensus 10 SG~GKTTvT~glm~aL~~rg~~VqpfKvGPDY 41 (451)
T COG1797 10 SGSGKTTVTLGLMRALRRRGLKVQPFKVGPDY 41 (451)
T ss_pred CCCcHHHHHHHHHHHHHhcCCcccccccCCCc
Confidence 356778888999999999999985 4445554
No 230
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=28.48 E-value=76 Score=24.74 Aligned_cols=37 Identities=19% Similarity=0.158 Sum_probs=27.5
Q ss_pred ccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhh
Q 039436 3 PFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQA 39 (422)
Q Consensus 3 p~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~ 39 (422)
+.+..-|-.=+.-|+..|.++||+|.++-.....+.+
T Consensus 7 ~~~~~~~~lGl~~la~~l~~~G~~v~~~d~~~~~~~l 43 (121)
T PF02310_consen 7 CVPGEVHPLGLLYLAAYLRKAGHEVDILDANVPPEEL 43 (121)
T ss_dssp EBTTSSTSHHHHHHHHHHHHTTBEEEEEESSB-HHHH
T ss_pred eeCCcchhHHHHHHHHHHHHCCCeEEEECCCCCHHHH
Confidence 4566677777899999999999999988655433333
No 231
>PRK02399 hypothetical protein; Provisional
Probab=28.47 E-value=2.4e+02 Score=27.71 Aligned_cols=94 Identities=16% Similarity=0.202 Sum_probs=57.5
Q ss_pred CCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeE--Eecccchh
Q 039436 258 KNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLV--VRDWAPQL 335 (422)
Q Consensus 258 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~--~~~~~pq~ 335 (422)
++|+|-+| |...+..-+..+.+.|++.|+.+++-...+..++ . .|+....+.+ |.+...++
T Consensus 185 ~kp~Ig~T---mfGvTtp~v~~~~~~Le~~GyEvlVFHATG~GGr-------------a-ME~Li~~G~~~gVlDlTttE 247 (406)
T PRK02399 185 DKPLIGLT---MFGVTTPCVQAAREELEARGYEVLVFHATGTGGR-------------A-MEKLIDSGLIAGVLDLTTTE 247 (406)
T ss_pred CCceEEEe---cCCCcHHHHHHHHHHHHhCCCeEEEEcCCCCchH-------------H-HHHHHHcCCceEEEEcchHH
Confidence 45666663 2334447788888999999888775444333211 1 1111111211 44676666
Q ss_pred hhhhcccccceeecCChhhHHHHHhcCCcEEccCcc
Q 039436 336 EILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMH 371 (422)
Q Consensus 336 ~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~ 371 (422)
..=.. +++ |..||-.=+-.|...|+|+|+.|=.
T Consensus 248 v~d~l--~GG-v~sagp~Rl~Aa~~~gIP~Vvs~Ga 280 (406)
T PRK02399 248 VCDEL--FGG-VLAAGPDRLEAAARTGIPQVVSPGA 280 (406)
T ss_pred HHHHH--hCc-CccCCccHHHHHHHcCCCEEecCCc
Confidence 54444 444 6677888889999999999987743
No 232
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=28.21 E-value=59 Score=31.97 Aligned_cols=28 Identities=18% Similarity=0.103 Sum_probs=22.9
Q ss_pred CccCHHHHHHHHHHHHhCCCcEEEEeCCC
Q 039436 6 AQGHLNQLLQLSRLVLSYNIPVHYVGSAV 34 (422)
Q Consensus 6 ~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~ 34 (422)
--||+.|+..|. .|+++||+|+++...-
T Consensus 47 HlGhlv~l~kL~-~fQ~aGh~~ivLigd~ 74 (401)
T COG0162 47 HLGHLVPLMKLR-RFQDAGHKPIVLIGDA 74 (401)
T ss_pred chhhHHHHHHHH-HHHHCCCeEEEEeccc
Confidence 349999998885 6889999999988653
No 233
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=28.10 E-value=3.5e+02 Score=27.98 Aligned_cols=27 Identities=26% Similarity=0.315 Sum_probs=22.3
Q ss_pred ccceeecCC------hhhHHHHHhcCCcEEccC
Q 039436 343 TGGFMSHCG------WNSCMESITMGVPIVAWP 369 (422)
Q Consensus 343 ~~~~i~HgG------~~s~~eal~~GvP~v~~P 369 (422)
.+++++|.| .+.+.+|.+.++|+|++-
T Consensus 71 ~~v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 103 (561)
T PRK06048 71 VGVCVATSGPGATNLVTGIATAYMDSVPIVALT 103 (561)
T ss_pred CeEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 557888877 447899999999999984
No 234
>TIGR00355 purH phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase. Involved in purine ribonucleotide biosynthesis. The IMP cyclohydrolase activity is in the N-terminal region.
Probab=28.06 E-value=2.8e+02 Score=28.18 Aligned_cols=36 Identities=0% Similarity=0.150 Sum_probs=28.6
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEec
Q 039436 13 LLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFE 64 (422)
Q Consensus 13 ~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~ 64 (422)
++.||+.|.+.|+++ ++|....+.++.. |+.+..+.
T Consensus 13 iv~lAk~L~~lGfeI--iATgGTak~L~e~--------------GI~v~~Vs 48 (511)
T TIGR00355 13 IVEFAQGLVERGVEL--LSTGGTAKLLAEA--------------GVPVTEVS 48 (511)
T ss_pred HHHHHHHHHHCCCEE--EEechHHHHHHHC--------------CCeEEEee
Confidence 578999999999988 4777777788776 77776664
No 235
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=27.51 E-value=1.6e+02 Score=22.14 Aligned_cols=27 Identities=26% Similarity=0.444 Sum_probs=21.4
Q ss_pred ceEEecCCcccCcHHHHHHHHHHHhhC
Q 039436 261 VLYVSFGTTTAMSDEQIKELAVGLKQS 287 (422)
Q Consensus 261 vv~vs~Gs~~~~~~~~~~~~~~~l~~~ 287 (422)
+|+|+.||........+.++++.+++.
T Consensus 2 ivlv~hGS~~~~~~~~~~~l~~~l~~~ 28 (101)
T cd03416 2 LLLVGHGSRDPRAAEALEALAERLRER 28 (101)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 689999998765666788888888754
No 236
>PLN02470 acetolactate synthase
Probab=27.17 E-value=5.3e+02 Score=26.79 Aligned_cols=62 Identities=6% Similarity=0.005 Sum_probs=34.7
Q ss_pred cceeecCChhhHHHH--HhcCCcEE----ccCcccc--hhhHHHHHHhhcCe-EEEEeeccccccccCHHHHHHHHHHHh
Q 039436 344 GGFMSHCGWNSCMES--ITMGVPIV----AWPMHSD--QPRNTLLITHLLKL-GLVMADWARRDEIVTSNVIENAVKRLM 414 (422)
Q Consensus 344 ~~~i~HgG~~s~~ea--l~~GvP~v----~~P~~~D--q~~na~~~~~~~g~-g~~~~~~~~~~~~~~~~~l~~av~~~l 414 (422)
-.++..+|||.+... ..++-+.. ..|...+ .++.++..+. .|+ |.++. +.++|..++++.+
T Consensus 475 ivV~NN~~yg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~iA~a-~G~~~~~v~---------~~~el~~al~~a~ 544 (585)
T PLN02470 475 IMVLNNQHLGMVVQWEDRFYKANRAHTYLGDPDAEAEIFPDFLKFAEG-CKIPAARVT---------RKSDLREAIQKML 544 (585)
T ss_pred EEEEeCCcchHHHHHHHHHhCCceeeeecCccccccCCCCCHHHHHHH-CCCeEEEEC---------CHHHHHHHHHHHH
Confidence 367888999876532 22222211 1111110 1445555554 565 44444 7899999999887
Q ss_pred c
Q 039436 415 A 415 (422)
Q Consensus 415 ~ 415 (422)
.
T Consensus 545 ~ 545 (585)
T PLN02470 545 D 545 (585)
T ss_pred h
Confidence 5
No 237
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=27.15 E-value=2.8e+02 Score=26.81 Aligned_cols=28 Identities=14% Similarity=0.219 Sum_probs=21.6
Q ss_pred CcHHHHHHHHHHHhhCCCeeEEEEecCC
Q 039436 272 MSDEQIKELAVGLKQSNQKFIWVLRDAD 299 (422)
Q Consensus 272 ~~~~~~~~~~~~l~~~~~~~v~~~~~~~ 299 (422)
.-+.++.+++++|.+.|..+...+....
T Consensus 8 ~~p~~~~~la~~L~~~G~~v~~~~~~~~ 35 (396)
T cd03818 8 NFPGQFRHLAPALAAQGHEVVFLTEPNA 35 (396)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEecCCC
Confidence 3457789999999999998877665543
No 238
>PRK07064 hypothetical protein; Provisional
Probab=27.15 E-value=4.5e+02 Score=26.92 Aligned_cols=28 Identities=21% Similarity=0.406 Sum_probs=23.0
Q ss_pred cccceeecCCh------hhHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCGW------NSCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG~------~s~~eal~~GvP~v~~P 369 (422)
..+++++|.|- +.+.+|...++|+|++-
T Consensus 66 ~~~v~~~t~GpG~~N~~~~i~~A~~~~~Pvl~i~ 99 (544)
T PRK07064 66 GLGVALTSTGTGAGNAAGALVEALTAGTPLLHIT 99 (544)
T ss_pred CCeEEEeCCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 35688889884 47889999999999983
No 239
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=27.06 E-value=1.9e+02 Score=27.81 Aligned_cols=84 Identities=15% Similarity=0.286 Sum_probs=61.0
Q ss_pred cCCCeE-Eecccc---hhhhhhcccccceeec--CChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeecc
Q 039436 322 KDKGLV-VRDWAP---QLEILAHCSTGGFMSH--CGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWA 395 (422)
Q Consensus 322 ~~~~~~-~~~~~p---q~~il~~~~~~~~i~H--gG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~ 395 (422)
+..++. +.+++| +..+|+.+.++.|.|. =|.|++.-.|..|+|.+.- .+-+.+-...+ .|+=+...
T Consensus 243 ~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~~~~l~~--~~ipVlf~--- 314 (360)
T PF07429_consen 243 GAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPFWQDLKE--QGIPVLFY--- 314 (360)
T ss_pred CccceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChHHHHHHh--CCCeEEec---
Confidence 334554 346766 6668888666555554 4899999999999999875 56666665554 47766655
Q ss_pred ccccccCHHHHHHHHHHHhc
Q 039436 396 RRDEIVTSNVIENAVKRLMA 415 (422)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~ 415 (422)
.+.++...|+++=+++..
T Consensus 315 --~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 315 --GDELDEALVREAQRQLAN 332 (360)
T ss_pred --cccCCHHHHHHHHHHHhh
Confidence 568999999999988876
No 240
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=27.00 E-value=1.1e+02 Score=24.61 Aligned_cols=37 Identities=22% Similarity=0.527 Sum_probs=27.0
Q ss_pred cceEEecCCcccCcHHHHHHHHHHHhhC--CCeeEEEEe
Q 039436 260 SVLYVSFGTTTAMSDEQIKELAVGLKQS--NQKFIWVLR 296 (422)
Q Consensus 260 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~--~~~~v~~~~ 296 (422)
.+|.++|||......+.+..+.+.+++. +..+-|..-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 5799999999886666788888888642 345556543
No 241
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=26.88 E-value=1.8e+02 Score=27.21 Aligned_cols=87 Identities=8% Similarity=-0.098 Sum_probs=49.1
Q ss_pred cccHHHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCe
Q 039436 247 HFCLEWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGL 326 (422)
Q Consensus 247 ~~~~~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~ 326 (422)
.++.++..+..-..+..-........+...+..+.++.++.|..+++-+|...... .+...
T Consensus 116 ~E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~---------~~~~~---------- 176 (293)
T COG2159 116 EELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGPGGA---------GLEKG---------- 176 (293)
T ss_pred HHHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCCCCc---------ccccC----------
Confidence 35555555433233333233333344555689999999999999998666543211 11110
Q ss_pred EEecccchhhhhhcccccceeecCCh
Q 039436 327 VVRDWAPQLEILAHCSTGGFMSHCGW 352 (422)
Q Consensus 327 ~~~~~~pq~~il~~~~~~~~i~HgG~ 352 (422)
....+.=.......|+.+.++.|+|.
T Consensus 177 ~~~p~~~~~va~~fP~l~IVl~H~G~ 202 (293)
T COG2159 177 HSDPLYLDDVARKFPELKIVLGHMGE 202 (293)
T ss_pred CCCchHHHHHHHHCCCCcEEEEecCC
Confidence 00011114445567899999999993
No 242
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated
Probab=26.69 E-value=4e+02 Score=27.61 Aligned_cols=28 Identities=14% Similarity=0.235 Sum_probs=22.9
Q ss_pred cccceeecCChh------hHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCGWN------SCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG~~------s~~eal~~GvP~v~~P 369 (422)
+.+++++|.|-| ++.+|...++|+|++-
T Consensus 67 ~~gv~~~t~GPG~~n~l~gi~~A~~~~~Pvl~i~ 100 (574)
T PRK07979 67 EVGVVLVTSGPGATNAITGIATAYMDSIPLVVLS 100 (574)
T ss_pred CceEEEECCCccHhhhHHHHHHHhhcCCCEEEEE
Confidence 466888888844 6789999999999993
No 243
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=26.38 E-value=71 Score=28.74 Aligned_cols=26 Identities=15% Similarity=0.259 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeCCCC
Q 039436 10 LNQLLQLSRLVLSYNIPVHYVGSAVH 35 (422)
Q Consensus 10 v~P~l~La~~L~~~Gh~Vt~~t~~~~ 35 (422)
+-+.+.+.+.|+++|+.|.|+|....
T Consensus 122 ip~al~l~~~l~~~G~~Vf~lTGR~e 147 (229)
T TIGR01675 122 LPEGLKLYQKIIELGIKIFLLSGRWE 147 (229)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCCh
Confidence 56889999999999999999998863
No 244
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed
Probab=26.34 E-value=2.5e+02 Score=28.91 Aligned_cols=27 Identities=22% Similarity=0.375 Sum_probs=22.6
Q ss_pred ccceeecCC------hhhHHHHHhcCCcEEccC
Q 039436 343 TGGFMSHCG------WNSCMESITMGVPIVAWP 369 (422)
Q Consensus 343 ~~~~i~HgG------~~s~~eal~~GvP~v~~P 369 (422)
.+++++|.| .+.+.||...++|+|++-
T Consensus 64 ~gv~~~t~GpG~~n~~~~l~~A~~~~~Pvl~i~ 96 (548)
T PRK08978 64 VGVCIATSGPGATNLITGLADALLDSVPVVAIT 96 (548)
T ss_pred CEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 567888888 447899999999999994
No 245
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=25.61 E-value=1.2e+02 Score=27.90 Aligned_cols=28 Identities=14% Similarity=0.028 Sum_probs=23.8
Q ss_pred ccceeecCChhhHHHHHh------cCCcEEccCc
Q 039436 343 TGGFMSHCGWNSCMESIT------MGVPIVAWPM 370 (422)
Q Consensus 343 ~~~~i~HgG~~s~~eal~------~GvP~v~~P~ 370 (422)
++++|+-||=||++.|+. .++|++.+-.
T Consensus 36 ~Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~ 69 (265)
T PRK04885 36 PDIVISVGGDGTLLSAFHRYENQLDKVRFVGVHT 69 (265)
T ss_pred CCEEEEECCcHHHHHHHHHhcccCCCCeEEEEeC
Confidence 789999999999999976 4788888743
No 246
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=25.41 E-value=42 Score=27.00 Aligned_cols=37 Identities=16% Similarity=-0.035 Sum_probs=29.5
Q ss_pred CccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhh
Q 039436 6 AQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVR 42 (422)
Q Consensus 6 ~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~ 42 (422)
+.++..=...+.++|.++|++|+++.++...+.+...
T Consensus 9 Gs~~~~~~~~~l~~L~~~g~~v~vv~S~~A~~~~~~~ 45 (129)
T PF02441_consen 9 GSIAAYKAPDLLRRLKRAGWEVRVVLSPSAERFVTPE 45 (129)
T ss_dssp SSGGGGGHHHHHHHHHTTTSEEEEEESHHHHHHSHHH
T ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEECCcHHHHhhhh
Confidence 3344444889999999999999999999877777665
No 247
>cd00561 CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/CobO/CobP. This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin (vitamin B12) adenosyltransferase, which is involved in cobalamin (vitamin B12) biosynthesis. This enzyme is a homodimer, which catalyzes the adenosylation reaction: ATP + cob(I)alamin + H2O <= phosphate + diphosphate + adenosylcobalamin.
Probab=25.04 E-value=4.2e+02 Score=22.30 Aligned_cols=32 Identities=16% Similarity=0.077 Sum_probs=27.2
Q ss_pred cccCCccCHHHHHHHHHHHHhCCCcEEE---EeCC
Q 039436 2 VPFPAQGHLNQLLQLSRLVLSYNIPVHY---VGSA 33 (422)
Q Consensus 2 vp~p~~GHv~P~l~La~~L~~~Gh~Vt~---~t~~ 33 (422)
++-++.|-..-.+.+|-+.+.+|+.|.| +-+.
T Consensus 8 y~g~G~Gkt~~a~g~~~ra~~~g~~v~~vQFlKg~ 42 (159)
T cd00561 8 YTGNGKGKTTAALGLALRALGHGYRVGVVQFLKGG 42 (159)
T ss_pred ECCCCCCHHHHHHHHHHHHHHCCCeEEEEEEeCCC
Confidence 5667889999999999999999999988 5553
No 248
>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional
Probab=25.02 E-value=2.9e+02 Score=28.76 Aligned_cols=52 Identities=8% Similarity=0.047 Sum_probs=29.6
Q ss_pred ecCChhhHHHHHhcCC--cE--EccCc-ccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHh
Q 039436 348 SHCGWNSCMESITMGV--PI--VAWPM-HSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLM 414 (422)
Q Consensus 348 ~HgG~~s~~eal~~Gv--P~--v~~P~-~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l 414 (422)
.+||||+........- |+ +.+|- +.++- +...+.+ .-.++++.|.+.|+++|
T Consensus 524 ~~GG~gs~v~~~l~~~~~~~~~~gi~d~f~~~g-~~~~l~~--------------~~Gl~~~~I~~~i~~~l 580 (581)
T PRK12315 524 LDGGFGEKIARYYGNSDMKVLNYGAKKEFNDRV-PVEELYK--------------RNHLTPEQIVEDILSVL 580 (581)
T ss_pred cCCCHHHHHHHHHHcCCCeEEEecCCCCCCCCC-CHHHHHH--------------HHCcCHHHHHHHHHHHh
Confidence 4799998777766433 33 33333 33322 2222322 12478889999888765
No 249
>PRK07586 hypothetical protein; Validated
Probab=24.83 E-value=3.7e+02 Score=27.35 Aligned_cols=27 Identities=19% Similarity=0.162 Sum_probs=20.8
Q ss_pred ccceeecCChh------hHHHHHhcCCcEEccC
Q 039436 343 TGGFMSHCGWN------SCMESITMGVPIVAWP 369 (422)
Q Consensus 343 ~~~~i~HgG~~------s~~eal~~GvP~v~~P 369 (422)
.++++.|.|-| .+.+|.+.++|+|++-
T Consensus 65 ~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~i~ 97 (514)
T PRK07586 65 PAATLLHLGPGLANGLANLHNARRARTPIVNIV 97 (514)
T ss_pred CEEEEecccHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 45677887755 4448999999999985
No 250
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=24.82 E-value=78 Score=25.89 Aligned_cols=38 Identities=16% Similarity=0.041 Sum_probs=31.3
Q ss_pred cccCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhh
Q 039436 2 VPFPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQA 39 (422)
Q Consensus 2 vp~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~ 39 (422)
.+.++.+|-.=..-++..|+++|++|+++....-.+.+
T Consensus 9 ~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i 46 (137)
T PRK02261 9 GVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEF 46 (137)
T ss_pred EeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 35678899999999999999999999999887544433
No 251
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=24.76 E-value=2.5e+02 Score=22.25 Aligned_cols=45 Identities=18% Similarity=0.246 Sum_probs=32.5
Q ss_pred ccccHHHhhcccCCcceEEecCCcccC-cHHHHHHHHHHHhhCCCeeEEE
Q 039436 246 RHFCLEWLDKQEKNSVLYVSFGTTTAM-SDEQIKELAVGLKQSNQKFIWV 294 (422)
Q Consensus 246 ~~~~~~wl~~~~~~~vv~vs~Gs~~~~-~~~~~~~~~~~l~~~~~~~v~~ 294 (422)
.++..+|+..+. +.+|=|-.... +++.+.++++.|.+.+...+.+
T Consensus 33 ~~d~~~~l~~gE----lvlttg~~~~~~~~~~~~~~i~~L~~~~~agL~i 78 (123)
T PF07905_consen 33 APDPSDWLRGGE----LVLTTGYALRDDDEEELREFIRELAEKGAAGLGI 78 (123)
T ss_pred cCCHHHhCCCCe----EEEECCcccCCCCHHHHHHHHHHHHHCCCeEEEE
Confidence 346678987643 77776666555 6677999999999998766644
No 252
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=24.72 E-value=68 Score=27.85 Aligned_cols=26 Identities=15% Similarity=0.151 Sum_probs=19.0
Q ss_pred CccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 039436 6 AQGHLNQLLQLSRLVLSYNIPVHYVGSA 33 (422)
Q Consensus 6 ~~GHv~P~l~La~~L~~~Gh~Vt~~t~~ 33 (422)
+.|++-- .+.+++.+|||+||-++-.
T Consensus 8 AsG~~Gs--~i~~EA~~RGHeVTAivRn 33 (211)
T COG2910 8 ASGKAGS--RILKEALKRGHEVTAIVRN 33 (211)
T ss_pred cCchhHH--HHHHHHHhCCCeeEEEEeC
Confidence 4455443 4678889999999988744
No 253
>COG3245 CycB Cytochrome c5 [Energy production and conversion]
Probab=24.69 E-value=51 Score=25.98 Aligned_cols=54 Identities=7% Similarity=0.014 Sum_probs=38.8
Q ss_pred HhcCCcEEccCcccchhhHHHHHHhhcCeEEEEee---------ccccccccCHHHHHHHHHHHh
Q 039436 359 ITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMAD---------WARRDEIVTSNVIENAVKRLM 414 (422)
Q Consensus 359 l~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~---------~~~~~~~~~~~~l~~av~~~l 414 (422)
++|+.++-..|..+|.-.|+-|+.+ |.-..++. .+....+.+.|+++.+|+-+.
T Consensus 60 ~CHa~~~~GAPk~GdkAaW~PRiaq--G~dtL~~hai~GfnAMPpkG~ca~cSdDe~kAaId~M~ 122 (126)
T COG3245 60 ACHAAGLPGAPKTGDKAAWAPRIAQ--GKDTLLDHAINGFNAMPPKGGCADCSDDEVKAAIDFMA 122 (126)
T ss_pred HhccCCCCCCCCCCchhhhhhHHHh--chHHHHHHHhccccCCCCCCCcCCCCHHHHHHHHHHHH
Confidence 4688889999999999999999976 54322221 122234689999999996543
No 254
>KOG4175 consensus Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=24.64 E-value=98 Score=27.06 Aligned_cols=42 Identities=17% Similarity=0.227 Sum_probs=34.1
Q ss_pred HHhhcccCCcceEEecCCcccCcHHHHHHHHHHHhhCCCeeE
Q 039436 251 EWLDKQEKNSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFI 292 (422)
Q Consensus 251 ~wl~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v 292 (422)
.|+..+.....++|+|=|....+...-.+++.+|...|..+|
T Consensus 8 TFa~aK~enknaLvtfiTaG~P~v~~T~kilkglq~gG~dII 49 (268)
T KOG4175|consen 8 TFARAKSENKNALVTFITAGDPDVSTTAKILKGLQSGGSDII 49 (268)
T ss_pred HHHHHHhcCCceEEEEEecCCCcHHHHHHHHHHHhcCCcCeE
Confidence 466665666779999988888888888899999998888765
No 255
>PF00933 Glyco_hydro_3: Glycosyl hydrolase family 3 N terminal domain; InterPro: IPR001764 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 3 GH3 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-xylosidase (3.2.1.37 from EC); N-acetyl beta-glucosaminidase (3.2.1.52 from EC); glucan beta-1,3-glucosidase (3.2.1.58 from EC); cellodextrinase (3.2.1.74 from EC); exo-1,3-1,4-glucanase (3.2.1 from EC). These enzymes are two-domain globular proteins that are N-glycosylated at three sites []. This domain is often N-terminal to the glycoside hydrolase family 3, C-terminal domain IPR002772 from INTERPRO.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1Y65_A 2OXN_A 3GS6_A 1TR9_A 3GSM_A 3UT0_B 3RRX_A 3USZ_A 2X42_A 2X40_A ....
Probab=24.63 E-value=1.1e+02 Score=28.69 Aligned_cols=110 Identities=12% Similarity=0.160 Sum_probs=62.6
Q ss_pred HHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCC-----hhhHhhccCCCeEEecccchhhhhhcccccceeecCCh
Q 039436 278 KELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELP-----KAYEDSVKDKGLVVRDWAPQLEILAHCSTGGFMSHCGW 352 (422)
Q Consensus 278 ~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp-----~~~~~~~~~~~~~~~~~~pq~~il~~~~~~~~i~HgG~ 352 (422)
..+..++++.+...|+.-=....+. ...+. +-+.++.+-+++++.+|..-..+..+ |.-.
T Consensus 184 ~pF~~~i~~ag~~~VM~sy~~id~~-------pas~s~~~l~~lLR~~lgf~G~viSD~~~m~~~~~~--------~~~~ 248 (299)
T PF00933_consen 184 PPFRAAIKDAGADAVMTSYPAIDGT-------PASLSPKILTDLLRNELGFDGVVISDDLEMGALSSN--------YSIE 248 (299)
T ss_dssp HHHHHHHHHTT-SEEEE-STCCTTE-------EGGG-HHHHCCCCCCCS---SEEEESTTTSHHHHCC--------TTHH
T ss_pred ccchhcccccccceeeeeccccCCc-------cchhhhccchhhCcCcccCCCeEecccchHHHHHhc--------cccc
Confidence 3455666567777776652111111 11111 11234445568999988854444433 1145
Q ss_pred hhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhc
Q 039436 353 NSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMA 415 (422)
Q Consensus 353 ~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~ 415 (422)
..+..|+.+|+=|++.+...+.. ...+.+. +. .+.+++++|.++++++|.
T Consensus 249 ~~~~~al~AG~D~~l~~~~~~~~--~~~l~~a------v~-----~g~i~~~~ld~av~RIl~ 298 (299)
T PF00933_consen 249 EAAVRALNAGCDMLLVCNDPDDD--IDALVEA------VE-----SGRISEERLDEAVRRILR 298 (299)
T ss_dssp HHHHHHHHHT-SBEESSSSHHHH--HHHHHHH------HH-----TTSSGHHHHHHHHHHHHH
T ss_pred hHHHHHHhCccCeeCCCCchhHH--HHHHHHH------HH-----cCCCCHHHHHHHHHHHhc
Confidence 67889999999999998876544 2222222 33 568999999999999984
No 256
>PRK00881 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional
Probab=24.53 E-value=4e+02 Score=27.21 Aligned_cols=36 Identities=3% Similarity=0.228 Sum_probs=28.6
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCchhhhhhccCCCCCccCCCCCCeEEEEec
Q 039436 13 LLQLSRLVLSYNIPVHYVGSAVHNRQAQVRVHGWDPLDVSSNNNNIHFHDFE 64 (422)
Q Consensus 13 ~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~gi~f~~~~ 64 (422)
++.||+.|.+.|+++ ++|....+.++.. |+.+..+.
T Consensus 17 iv~lAk~L~~lGfeI--~AT~GTak~L~e~--------------GI~v~~V~ 52 (513)
T PRK00881 17 IVEFAKALVELGVEI--LSTGGTAKLLAEA--------------GIPVTEVS 52 (513)
T ss_pred HHHHHHHHHHCCCEE--EEcchHHHHHHHC--------------CCeeEEee
Confidence 678999999999988 4667777788776 77776664
No 257
>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase. In a number of bacteria, including Oxalobacter formigenes from the human gut, a two-gene operon of oxc (oxalyl-CoA decarboxylase) and frc (formyl-CoA transferase) encodes a system for degrading and therefore detoxifying oxalate. Members of this family are the thiamine pyrophosphate (TPP)-containing enzyme oxalyl-CoA decarboxylase.
Probab=24.21 E-value=4.7e+02 Score=26.91 Aligned_cols=28 Identities=11% Similarity=0.132 Sum_probs=22.6
Q ss_pred cccceeecCCh------hhHHHHHhcCCcEEccC
Q 039436 342 STGGFMSHCGW------NSCMESITMGVPIVAWP 369 (422)
Q Consensus 342 ~~~~~i~HgG~------~s~~eal~~GvP~v~~P 369 (422)
..+++++|.|- +.+.+|...++|||++-
T Consensus 65 ~~gv~~~t~GPG~~N~~~gia~A~~~~~Pvl~I~ 98 (554)
T TIGR03254 65 KPGVCLTVSAPGFLNGLTALANATTNCFPMIMIS 98 (554)
T ss_pred CCEEEEEccCccHHhHHHHHHHHHhcCCCEEEEE
Confidence 35688888774 47889999999999984
No 258
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=24.02 E-value=1.8e+02 Score=21.63 Aligned_cols=27 Identities=26% Similarity=0.304 Sum_probs=20.6
Q ss_pred ceEEecCCccc-CcHHHHHHHHHHHhhC
Q 039436 261 VLYVSFGTTTA-MSDEQIKELAVGLKQS 287 (422)
Q Consensus 261 vv~vs~Gs~~~-~~~~~~~~~~~~l~~~ 287 (422)
+|+++.||-.. ...+.+.++++.+++.
T Consensus 2 lllv~HGs~~~s~~~~~~~~~~~~l~~~ 29 (101)
T cd03409 2 LLVVGHGSPYKDPYKKDIEAQAHNLAES 29 (101)
T ss_pred EEEEECCCCCCccHHHHHHHHHHHHHHH
Confidence 68999999876 5556777788888653
No 259
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=23.99 E-value=3.1e+02 Score=26.52 Aligned_cols=37 Identities=16% Similarity=0.209 Sum_probs=28.5
Q ss_pred cceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecC
Q 039436 260 SVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDA 298 (422)
Q Consensus 260 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~ 298 (422)
.|+++++|+.. ...-+..++++|.+.|+++.+.....
T Consensus 2 rIl~~~~p~~G--Hv~P~l~la~~L~~rGh~V~~~t~~~ 38 (401)
T cd03784 2 RVLITTIGSRG--DVQPLVALAWALRAAGHEVRVATPPE 38 (401)
T ss_pred eEEEEeCCCcc--hHHHHHHHHHHHHHCCCeEEEeeCHh
Confidence 36888998765 34556788999999999998887754
No 260
>COG2874 FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=23.79 E-value=2.2e+02 Score=25.50 Aligned_cols=27 Identities=15% Similarity=0.091 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEeCCCC
Q 039436 9 HLNQLLQLSRLVLSYNIPVHYVGSAVH 35 (422)
Q Consensus 9 Hv~P~l~La~~L~~~Gh~Vt~~t~~~~ 35 (422)
--.=..+++..+...||.|++++|+..
T Consensus 41 KSvLsqr~~YG~L~~g~~v~yvsTe~T 67 (235)
T COG2874 41 KSVLSQRFAYGFLMNGYRVTYVSTELT 67 (235)
T ss_pred HHHHHHHHHHHHHhCCceEEEEEechh
Confidence 333456788888999999999999864
No 261
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=23.67 E-value=86 Score=24.82 Aligned_cols=20 Identities=10% Similarity=0.116 Sum_probs=16.3
Q ss_pred HHHHHHHHHHhCCCcEEEEe
Q 039436 12 QLLQLSRLVLSYNIPVHYVG 31 (422)
Q Consensus 12 P~l~La~~L~~~Gh~Vt~~t 31 (422)
-++.+|++|+++|++|+..-
T Consensus 24 ~~~~VA~~L~e~g~dv~atD 43 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATD 43 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEe
Confidence 46889999999998886543
No 262
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated
Probab=23.62 E-value=2.2e+02 Score=29.49 Aligned_cols=27 Identities=19% Similarity=0.413 Sum_probs=22.2
Q ss_pred ccceeecCC------hhhHHHHHhcCCcEEccC
Q 039436 343 TGGFMSHCG------WNSCMESITMGVPIVAWP 369 (422)
Q Consensus 343 ~~~~i~HgG------~~s~~eal~~GvP~v~~P 369 (422)
.++++.|.| .+.+.||-..++|+|++-
T Consensus 73 ~~v~~vt~GpG~~N~l~~i~~A~~~~~Pvl~Is 105 (568)
T PRK07449 73 PVAVIVTSGTAVANLYPAVIEAGLTGVPLIVLT 105 (568)
T ss_pred CEEEEECCccHHHhhhHHHHHHhhcCCcEEEEE
Confidence 457788888 448899999999999994
No 263
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=23.55 E-value=1.8e+02 Score=28.94 Aligned_cols=26 Identities=19% Similarity=0.350 Sum_probs=21.7
Q ss_pred ccceeecCCh------hhHHHHHhcCCcEEcc
Q 039436 343 TGGFMSHCGW------NSCMESITMGVPIVAW 368 (422)
Q Consensus 343 ~~~~i~HgG~------~s~~eal~~GvP~v~~ 368 (422)
.+++++|+|- +.+.+|...++|+|++
T Consensus 64 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i 95 (432)
T TIGR00173 64 PVAVVCTSGTAVANLLPAVIEASYSGVPLIVL 95 (432)
T ss_pred CEEEEECCcchHhhhhHHHHHhcccCCcEEEE
Confidence 5577888774 4788999999999999
No 264
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=23.47 E-value=4.9e+02 Score=23.72 Aligned_cols=23 Identities=9% Similarity=0.059 Sum_probs=16.5
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCc
Q 039436 14 LQLSRLVLSYNIPVHYVGSAVHN 36 (422)
Q Consensus 14 l~La~~L~~~Gh~Vt~~t~~~~~ 36 (422)
-.||+.|.++|+.|.+.+...+.
T Consensus 15 r~la~~L~~~g~~v~~Svat~~g 37 (248)
T PRK08057 15 RALARALAAAGVDIVLSLAGRTG 37 (248)
T ss_pred HHHHHHHHhCCCeEEEEEccCCC
Confidence 36788888889888776655543
No 265
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=23.47 E-value=1.5e+02 Score=30.56 Aligned_cols=29 Identities=17% Similarity=0.217 Sum_probs=23.8
Q ss_pred ccccceeecCChh------hHHHHHhcCCcEEccC
Q 039436 341 CSTGGFMSHCGWN------SCMESITMGVPIVAWP 369 (422)
Q Consensus 341 ~~~~~~i~HgG~~------s~~eal~~GvP~v~~P 369 (422)
.+.++++.|+|-| .+.+|..-++|||++=
T Consensus 63 GkpgV~~~tsGPGatN~~tgla~A~~d~~Pll~it 97 (550)
T COG0028 63 GKPGVCLVTSGPGATNLLTGLADAYMDSVPLLAIT 97 (550)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 3467899999955 6789999999999984
No 266
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed
Probab=23.42 E-value=7.7e+02 Score=25.26 Aligned_cols=62 Identities=13% Similarity=0.153 Sum_probs=35.3
Q ss_pred ccceeecCChhhHHHH--HhcCCcEEccCcccchhhHHHHHHhhcCe-EEEEeeccccccccCHHHHHHHHHHHhc
Q 039436 343 TGGFMSHCGWNSCMES--ITMGVPIVAWPMHSDQPRNTLLITHLLKL-GLVMADWARRDEIVTSNVIENAVKRLMA 415 (422)
Q Consensus 343 ~~~~i~HgG~~s~~ea--l~~GvP~v~~P~~~Dq~~na~~~~~~~g~-g~~~~~~~~~~~~~~~~~l~~av~~~l~ 415 (422)
+-.++..+|+|.+... ..++-+.... .+.+.++.++.++. .|+ |.++. +.++|..++++.+.
T Consensus 449 ~ivV~NN~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~la~a-~G~~~~~v~---------~~~el~~al~~a~~ 513 (548)
T PRK08978 449 KIVLLDNQRLGMVRQWQQLFFDERYSET-DLSDNPDFVMLASA-FGIPGQTIT---------RKDQVEAALDTLLN 513 (548)
T ss_pred EEEEEeCCccHHHHHHHHHHhCCcceec-CCCCCCCHHHHHHH-CCCeEEEEC---------CHHHHHHHHHHHHh
Confidence 3367888899866432 2222221111 01134566666655 564 34443 78999999998875
No 267
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=23.32 E-value=2.1e+02 Score=27.21 Aligned_cols=141 Identities=11% Similarity=0.084 Sum_probs=75.5
Q ss_pred CcceEEecC-Cc---ccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccc-
Q 039436 259 NSVLYVSFG-TT---TAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAP- 333 (422)
Q Consensus 259 ~~vv~vs~G-s~---~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~p- 333 (422)
++.|.++.| |. -..+.+.+.++++.|.+.+.++++.-++.+ ...-+.+...... .+.+.+-.+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~e-----------~e~~~~i~~~~~~-~~~l~~k~sL 242 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPDE-----------EERAEEIAKGLPN-AVILAGKTSL 242 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChHH-----------HHHHHHHHHhcCC-ccccCCCCCH
Confidence 577888888 43 357889999999999998866554433311 0111112222221 110222222
Q ss_pred --hhhhhhcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHH-HHhhcCeEEEEee----------ccccccc
Q 039436 334 --QLEILAHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLL-ITHLLKLGLVMAD----------WARRDEI 400 (422)
Q Consensus 334 --q~~il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~-~~~~~g~g~~~~~----------~~~~~~~ 400 (422)
-..++++ +++||+. -.|-++=|.+.|+|.|++ +++-..+-.+ =.+ +..++.... +....+.
T Consensus 243 ~e~~~li~~--a~l~I~~-DSg~~HlAaA~~~P~I~i--yg~t~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (334)
T COG0859 243 EELAALIAG--ADLVIGN-DSGPMHLAAALGTPTIAL--YGPTSPAFTPPPDP-KLPGISGNLDCSPCKPSGGHHECLKD 316 (334)
T ss_pred HHHHHHHhc--CCEEEcc-CChHHHHHHHcCCCEEEE--ECCCCccccCCCCc-cceEeeccccccccccccchhccccc
Confidence 2335556 6688876 456777788899999987 2221100000 000 112211110 0011346
Q ss_pred cCHHHHHHHHHHHhcCC
Q 039436 401 VTSNVIENAVKRLMASK 417 (422)
Q Consensus 401 ~~~~~l~~av~~~l~~~ 417 (422)
++.+.+.+++..++...
T Consensus 317 i~~~~v~~~~~~~~~~~ 333 (334)
T COG0859 317 IEPEKVLEAAEALLATK 333 (334)
T ss_pred CCHHHHHHHHHHHhhcc
Confidence 88999999998887643
No 268
>PRK09620 hypothetical protein; Provisional
Probab=23.23 E-value=76 Score=28.56 Aligned_cols=26 Identities=19% Similarity=0.279 Sum_probs=20.3
Q ss_pred CccCHHHHHHHHHHHHhCCCcEEEEeCC
Q 039436 6 AQGHLNQLLQLSRLVLSYNIPVHYVGSA 33 (422)
Q Consensus 6 ~~GHv~P~l~La~~L~~~Gh~Vt~~t~~ 33 (422)
+.|-+- ..||++|.++|++|+++...
T Consensus 27 SSGfiG--s~LA~~L~~~Ga~V~li~g~ 52 (229)
T PRK09620 27 AKGTIG--RIIAEELISKGAHVIYLHGY 52 (229)
T ss_pred CcCHHH--HHHHHHHHHCCCeEEEEeCC
Confidence 344444 57899999999999999755
No 269
>PF03720 UDPG_MGDP_dh_C: UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; InterPro: IPR014027 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the C-terminal substrate-binding domain of these enzymes. Structural studies indicate that this domain forms an incomplete dinucleotide binding fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3GG2_D 1DLI_A 1DLJ_A 2Y0E_D 2Y0D_B 2Y0C_D 1MV8_B 1MUU_A 1MFZ_C 3TDK_B ....
Probab=23.15 E-value=91 Score=24.02 Aligned_cols=31 Identities=13% Similarity=0.079 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhCCCcEEEEeCCCCchhhhh
Q 039436 11 NQLLQLSRLVLSYNIPVHYVGSAVHNRQAQV 41 (422)
Q Consensus 11 ~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~ 41 (422)
.|.+.|++.|.++|.+|.+.=+--.......
T Consensus 17 Sp~~~l~~~L~~~g~~V~~~DP~v~~~~~~~ 47 (106)
T PF03720_consen 17 SPALELIEELKERGAEVSVYDPYVDEEEIKE 47 (106)
T ss_dssp -HHHHHHHHHHHTT-EEEEE-TTSHHHHHHH
T ss_pred CHHHHHHHHHHHCCCEEEEECCccChHHHHh
Confidence 6899999999999999887765544444433
No 270
>PRK05920 aromatic acid decarboxylase; Validated
Probab=23.13 E-value=77 Score=27.97 Aligned_cols=32 Identities=19% Similarity=0.102 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeCCCCchhhhh
Q 039436 10 LNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQV 41 (422)
Q Consensus 10 v~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~ 41 (422)
..=.+.|.+.|.+.|++|+++.++...+.+..
T Consensus 16 a~ka~~lvr~L~~~g~~V~vi~T~~A~~fv~~ 47 (204)
T PRK05920 16 AIYGVRLLECLLAADYEVHLVISKAAQKVLAT 47 (204)
T ss_pred HHHHHHHHHHHHHCCCEEEEEEChhHHHHHHH
Confidence 34467899999999999999999886665543
No 271
>PF08026 Antimicrobial_5: Bee antimicrobial peptide; InterPro: IPR012524 This entry represents antimicrobial peptides produced by bees. These peptides have strong antimicrobial and some anti-fungal activity and has homology to abaecin which is the largest proline-rich antimicrobial peptide isolated from European bumblebee Bombus pascuorum [].; GO: 0042381 hemolymph coagulation, 0005576 extracellular region
Probab=23.11 E-value=10 Score=22.54 Aligned_cols=23 Identities=22% Similarity=0.330 Sum_probs=15.9
Q ss_pred cccCCccCHHHHHHHHHHHHhCC
Q 039436 2 VPFPAQGHLNQLLQLSRLVLSYN 24 (422)
Q Consensus 2 vp~p~~GHv~P~l~La~~L~~~G 24 (422)
=+||++|-.||-+++---|-..|
T Consensus 16 PTFPGqGP~NPKir~Pyplpn~g 38 (39)
T PF08026_consen 16 PTFPGQGPFNPKIRWPYPLPNPG 38 (39)
T ss_pred CcCCCCCCCCccccccccCCCCC
Confidence 36889999999877654444444
No 272
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=23.05 E-value=79 Score=26.83 Aligned_cols=18 Identities=17% Similarity=0.006 Sum_probs=15.7
Q ss_pred HHHHHHHHhCCCcEEEEe
Q 039436 14 LQLSRLVLSYNIPVHYVG 31 (422)
Q Consensus 14 l~La~~L~~~Gh~Vt~~t 31 (422)
+.+||.|+++|++|+++.
T Consensus 42 l~~AR~L~~~G~~V~v~~ 59 (169)
T PF03853_consen 42 LVAARHLANRGYNVTVYL 59 (169)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCeEEEEE
Confidence 678999999999999844
No 273
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=23.01 E-value=8.3e+02 Score=25.37 Aligned_cols=62 Identities=10% Similarity=0.034 Sum_probs=35.5
Q ss_pred ccceeecCChhhHHHH--HhcCCcEEccCcccchhhHHHHHHhhcCe-EEEEeeccccccccCHHHHHHHHHHHhc
Q 039436 343 TGGFMSHCGWNSCMES--ITMGVPIVAWPMHSDQPRNTLLITHLLKL-GLVMADWARRDEIVTSNVIENAVKRLMA 415 (422)
Q Consensus 343 ~~~~i~HgG~~s~~ea--l~~GvP~v~~P~~~Dq~~na~~~~~~~g~-g~~~~~~~~~~~~~~~~~l~~av~~~l~ 415 (422)
+-.++.++|||.+... +.+|-+....- +....+.++.++. .|+ |.++ -+.++|++++++.+.
T Consensus 467 ~~vV~NN~~~g~~~~~~~~~~~~~~~~~~-~~~~~d~~~la~a-~G~~~~~v---------~~~~el~~al~~a~~ 531 (586)
T PRK06276 467 VICIFDNRTLGMVYQWQNLYYGKRQSEVH-LGETPDFVKLAES-YGVKADRV---------EKPDEIKEALKEAIK 531 (586)
T ss_pred EEEEEeCCchHHHHHHHHHHhCCCccccc-CCCCCCHHHHHHH-CCCeEEEE---------CCHHHHHHHHHHHHh
Confidence 3368889999876432 33443322210 0112455555554 565 3333 378999999998875
No 274
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=23.00 E-value=1.6e+02 Score=28.58 Aligned_cols=40 Identities=25% Similarity=0.212 Sum_probs=29.8
Q ss_pred CeEEecccchhh---hhhcccccceeecCChhhHHHHHhcCCcEEc
Q 039436 325 GLVVRDWAPQLE---ILAHCSTGGFMSHCGWNSCMESITMGVPIVA 367 (422)
Q Consensus 325 ~~~~~~~~pq~~---il~~~~~~~~i~HgG~~s~~eal~~GvP~v~ 367 (422)
.+.+.+|+||.. +|.. ++.=+-. |=-|..-|..+|+|+|=
T Consensus 245 ~l~~lPF~~Q~~yD~LLw~--cD~NfVR-GEDSfVRAqwAgkPFvW 287 (374)
T PF10093_consen 245 TLHVLPFVPQDDYDRLLWA--CDFNFVR-GEDSFVRAQWAGKPFVW 287 (374)
T ss_pred EEEECCCCCHHHHHHHHHh--CccceEe-cchHHHHHHHhCCCceE
Confidence 466779999875 6655 4454444 56699999999999984
No 275
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=22.89 E-value=4.3e+02 Score=23.92 Aligned_cols=23 Identities=0% Similarity=-0.010 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHhCCC-cEEEEeC
Q 039436 10 LNQLLQLSRLVLSYNI-PVHYVGS 32 (422)
Q Consensus 10 v~P~l~La~~L~~~Gh-~Vt~~t~ 32 (422)
++|...+..+|++-|. +|.++|+
T Consensus 105 tt~~~A~~~AL~alg~~RIalvTP 128 (239)
T TIGR02990 105 VTPSSAAVDGLAALGVRRISLLTP 128 (239)
T ss_pred eCHHHHHHHHHHHcCCCEEEEECC
Confidence 5788889999999884 5777776
No 276
>PRK08617 acetolactate synthase; Reviewed
Probab=22.81 E-value=4.3e+02 Score=27.21 Aligned_cols=27 Identities=22% Similarity=0.309 Sum_probs=22.0
Q ss_pred ccceeecCC------hhhHHHHHhcCCcEEccC
Q 039436 343 TGGFMSHCG------WNSCMESITMGVPIVAWP 369 (422)
Q Consensus 343 ~~~~i~HgG------~~s~~eal~~GvP~v~~P 369 (422)
.+++++|.| .+++.+|...++|+|++-
T Consensus 68 ~gv~~vt~GpG~~N~l~gl~~A~~~~~Pvlvis 100 (552)
T PRK08617 68 PGVVLVTSGPGVSNLATGLVTATAEGDPVVAIG 100 (552)
T ss_pred CEEEEECCCCcHhHhHHHHHHHhhcCCCEEEEe
Confidence 557788877 448899999999999984
No 277
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated
Probab=22.55 E-value=4.1e+02 Score=27.68 Aligned_cols=27 Identities=15% Similarity=0.225 Sum_probs=22.4
Q ss_pred ccceeecCC------hhhHHHHHhcCCcEEccC
Q 039436 343 TGGFMSHCG------WNSCMESITMGVPIVAWP 369 (422)
Q Consensus 343 ~~~~i~HgG------~~s~~eal~~GvP~v~~P 369 (422)
.+++++|.| .+++.+|.+.++|+|++.
T Consensus 85 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 117 (587)
T PRK06965 85 VGVALVTSGPGVTNAVTGIATAYMDSIPMVVIS 117 (587)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 557888877 447889999999999995
No 278
>PTZ00445 p36-lilke protein; Provisional
Probab=22.39 E-value=86 Score=27.85 Aligned_cols=29 Identities=14% Similarity=0.124 Sum_probs=25.1
Q ss_pred cCHHH-HHHHHHHHHhCCCcEEEEeCCCCc
Q 039436 8 GHLNQ-LLQLSRLVLSYNIPVHYVGSAVHN 36 (422)
Q Consensus 8 GHv~P-~l~La~~L~~~Gh~Vt~~t~~~~~ 36 (422)
+|+.| +..+.++|.++|..|+++|-.+..
T Consensus 74 ~~~tpefk~~~~~l~~~~I~v~VVTfSd~~ 103 (219)
T PTZ00445 74 TSVTPDFKILGKRLKNSNIKISVVTFSDKE 103 (219)
T ss_pred ccCCHHHHHHHHHHHHCCCeEEEEEccchh
Confidence 56778 889999999999999999987653
No 279
>TIGR02418 acolac_catab acetolactate synthase, catabolic. Acetolactate synthase (EC 2.2.1.6) combines two molecules of pyruvate to yield 2-acetolactate with the release of CO2. This reaction may be involved in either valine biosynthesis (biosynthetic) or conversion of pyruvate to acetoin and possibly to 2,3-butanediol (catabolic). The biosynthetic type, described by TIGR00118, is also capable of forming acetohydroxybutyrate from pyruvate and 2-oxobutyrate for isoleucine biosynthesis. The family described here, part of the same larger family of thiamine pyrophosphate-dependent enzymes (pfam00205, pfam02776) is the catabolic form, generally found associated with in species with acetolactate decarboxylase and usually found in the same operon. The model may not encompass all catabolic acetolactate synthases, but rather one particular clade in the larger TPP-dependent enzyme family.
Probab=22.38 E-value=4.6e+02 Score=26.88 Aligned_cols=27 Identities=22% Similarity=0.247 Sum_probs=22.5
Q ss_pred ccceeecCC------hhhHHHHHhcCCcEEccC
Q 039436 343 TGGFMSHCG------WNSCMESITMGVPIVAWP 369 (422)
Q Consensus 343 ~~~~i~HgG------~~s~~eal~~GvP~v~~P 369 (422)
.+++++|.| .+.+.+|...++|+|++-
T Consensus 62 ~gv~~~t~GpG~~n~l~gl~~A~~~~~Pvl~I~ 94 (539)
T TIGR02418 62 PGVALVTSGPGCSNLVTGLATANSEGDPVVAIG 94 (539)
T ss_pred ceEEEECCCCCHhHHHHHHHHHhhcCCCEEEEe
Confidence 567888888 448889999999999994
No 280
>PRK06222 ferredoxin-NADP(+) reductase subunit alpha; Reviewed
Probab=22.26 E-value=1.1e+02 Score=28.33 Aligned_cols=26 Identities=8% Similarity=0.052 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeCCCC
Q 039436 10 LNQLLQLSRLVLSYNIPVHYVGSAVH 35 (422)
Q Consensus 10 v~P~l~La~~L~~~Gh~Vt~~t~~~~ 35 (422)
+.|++.++++|.++|.+|+++.....
T Consensus 110 iaPl~~l~~~l~~~~~~v~l~~g~r~ 135 (281)
T PRK06222 110 IAPVYPIAKALKEAGNKVITIIGARN 135 (281)
T ss_pred HHHHHHHHHHHHHCCCeEEEEEecCC
Confidence 88999999999999999998876554
No 281
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=22.24 E-value=1.1e+02 Score=23.76 Aligned_cols=30 Identities=17% Similarity=0.175 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhCCCcEEEEeCCCCchhhhhh
Q 039436 11 NQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVR 42 (422)
Q Consensus 11 ~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~ 42 (422)
.=++.+|+.|.+.||++ ++|+...+.++..
T Consensus 12 ~~~~~~a~~l~~~G~~i--~AT~gTa~~L~~~ 41 (112)
T cd00532 12 AMLVDLAPKLSSDGFPL--FATGGTSRVLADA 41 (112)
T ss_pred HHHHHHHHHHHHCCCEE--EECcHHHHHHHHc
Confidence 34789999999999887 4666666677665
No 282
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=22.06 E-value=3.1e+02 Score=23.00 Aligned_cols=39 Identities=15% Similarity=0.183 Sum_probs=27.3
Q ss_pred cchhhhhhcccccceeecCChhhHH---HHHhcCCcEEccCc
Q 039436 332 APQLEILAHCSTGGFMSHCGWNSCM---ESITMGVPIVAWPM 370 (422)
Q Consensus 332 ~pq~~il~~~~~~~~i~HgG~~s~~---eal~~GvP~v~~P~ 370 (422)
.+...++..-+-..++--||.||+- |++.+++|+++++.
T Consensus 82 ~~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 82 FARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred chHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 3455566554555666678888765 46889999999875
No 283
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=21.97 E-value=88 Score=27.70 Aligned_cols=30 Identities=13% Similarity=-0.005 Sum_probs=22.5
Q ss_pred cCCccCHHHHHHHHHHHHhCCCcEEEEeCCCC
Q 039436 4 FPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVH 35 (422)
Q Consensus 4 ~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~ 35 (422)
..+.|++- -.||++|++.||+|++.+....
T Consensus 6 i~GtGniG--~alA~~~a~ag~eV~igs~r~~ 35 (211)
T COG2085 6 IIGTGNIG--SALALRLAKAGHEVIIGSSRGP 35 (211)
T ss_pred EeccChHH--HHHHHHHHhCCCeEEEecCCCh
Confidence 34555554 3688999999999999987654
No 284
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=21.96 E-value=1.7e+02 Score=29.64 Aligned_cols=27 Identities=15% Similarity=0.209 Sum_probs=22.2
Q ss_pred cccceeecCChhhHHHHHhc----CCcEEcc
Q 039436 342 STGGFMSHCGWNSCMESITM----GVPIVAW 368 (422)
Q Consensus 342 ~~~~~i~HgG~~s~~eal~~----GvP~v~~ 368 (422)
.++++|+=||=||++.|... ++|++.+
T Consensus 262 ~~DlVIsiGGDGTlL~Aar~~~~~~iPILGI 292 (508)
T PLN02935 262 KVDLVITLGGDGTVLWAASMFKGPVPPVVPF 292 (508)
T ss_pred CCCEEEEECCcHHHHHHHHHhccCCCcEEEE
Confidence 38899999999999999764 5677655
No 285
>TIGR01498 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. This model describes the folate biosynthesis enzyme 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. Alternate names include 6-hydroxymethyl-7,8-dihydropterin diphosphokinase and 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (HPPK). The extreme C-terminal region, of typically eight to thirty residues, is not included in the model. This enzyme may be found as a fusion protein with other enzymes of folate biosynthesis.
Probab=21.92 E-value=1.1e+02 Score=24.56 Aligned_cols=27 Identities=11% Similarity=0.241 Sum_probs=21.9
Q ss_pred eEEecCCcccCcHHHHHHHHHHHhhCC
Q 039436 262 LYVSFGTTTAMSDEQIKELAVGLKQSN 288 (422)
Q Consensus 262 v~vs~Gs~~~~~~~~~~~~~~~l~~~~ 288 (422)
+|+++||......+.++..+..|++..
T Consensus 1 ~~i~lGSN~g~~~~~l~~A~~~L~~~~ 27 (127)
T TIGR01498 1 AYIALGSNLGDRLKNLRAALAALAALP 27 (127)
T ss_pred CEEEEeCCcHhHHHHHHHHHHHHhcCC
Confidence 589999998767777888888887655
No 286
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=21.84 E-value=5.3e+02 Score=23.84 Aligned_cols=99 Identities=17% Similarity=0.200 Sum_probs=48.7
Q ss_pred CcceEEecCCcccCcHHHHHHH---HHHHh-hCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccch
Q 039436 259 NSVLYVSFGTTTAMSDEQIKEL---AVGLK-QSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQ 334 (422)
Q Consensus 259 ~~vv~vs~Gs~~~~~~~~~~~~---~~~l~-~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq 334 (422)
++.|.|++-.....+.+...++ ++.+. +.+.++++.--... .+ ...-..+.+...++..++...-|+
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~-~D--------~~~~~~l~~~~~~~~~i~~~~~~~ 242 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQP-QD--------LPLARALRDQLLGPAEVLSPLDPE 242 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcc-hh--------HHHHHHHHHhcCCCcEEEecCCHH
Confidence 4567777755433333333333 34432 34777766532211 00 011123333333322233333333
Q ss_pred hh--hhhcccccceeecCChhhHHHHHhcCCcEEccC
Q 039436 335 LE--ILAHCSTGGFMSHCGWNSCMESITMGVPIVAWP 369 (422)
Q Consensus 335 ~~--il~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P 369 (422)
+. ++++ ++++|+-==+ ++.-|+.+|||.+.+.
T Consensus 243 e~~~~i~~--~~~vI~~RlH-~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 243 ELLGLFAS--ARLVIGMRLH-ALILAAAAGVPFVALS 276 (298)
T ss_pred HHHHHHhh--CCEEEEechH-HHHHHHHcCCCEEEee
Confidence 33 4556 7788875333 4566788999999883
No 287
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=21.83 E-value=97 Score=27.79 Aligned_cols=26 Identities=12% Similarity=0.229 Sum_probs=19.9
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEeCCC
Q 039436 9 HLNQLLQLSRLVLSYNIPVHYVGSAV 34 (422)
Q Consensus 9 Hv~P~l~La~~L~~~Gh~Vt~~t~~~ 34 (422)
|..-|-+.|.+|.++|++|.++..++
T Consensus 47 ~~saMRhfa~~L~~~G~~V~Y~~~~~ 72 (224)
T PF04244_consen 47 FFSAMRHFADELRAKGFRVHYIELDD 72 (224)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE-TT-
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 56778899999999999999999883
No 288
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=21.68 E-value=1.8e+02 Score=22.75 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=31.0
Q ss_pred cCCccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhhhh
Q 039436 4 FPAQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQVR 42 (422)
Q Consensus 4 ~p~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~~~ 42 (422)
+-..|+-..++.+.+.++++|..|..+|........+..
T Consensus 60 is~sg~~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~~a 98 (131)
T PF01380_consen 60 ISYSGETRELIELLRFAKERGAPVILITSNSESPLARLA 98 (131)
T ss_dssp EESSSTTHHHHHHHHHHHHTTSEEEEEESSTTSHHHHHS
T ss_pred eeccccchhhhhhhHHHHhcCCeEEEEeCCCCCchhhhC
Confidence 345788999999999999999999888877665555443
No 289
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=21.57 E-value=1.8e+02 Score=22.67 Aligned_cols=73 Identities=14% Similarity=0.103 Sum_probs=43.1
Q ss_pred cHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEE------ecccchhhhhhc-ccccc
Q 039436 273 SDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVV------RDWAPQLEILAH-CSTGG 345 (422)
Q Consensus 273 ~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~------~~~~pq~~il~~-~~~~~ 345 (422)
..+-..++++++++.|.+.+.+....+... ...+..+..+.. ..|+..+.|+.- ...++
T Consensus 10 rGeia~r~~ra~r~~Gi~tv~v~s~~d~~s--------------~~~~~ad~~~~~~~~~~~~~yl~~e~I~~ia~~~g~ 75 (110)
T PF00289_consen 10 RGEIAVRIIRALRELGIETVAVNSNPDTVS--------------THVDMADEAYFEPPGPSPESYLNIEAIIDIARKEGA 75 (110)
T ss_dssp -HHHHHHHHHHHHHTTSEEEEEEEGGGTTG--------------HHHHHSSEEEEEESSSGGGTTTSHHHHHHHHHHTTE
T ss_pred CCHHHHHHHHHHHHhCCcceeccCchhccc--------------ccccccccceecCcchhhhhhccHHHHhhHhhhhcC
Confidence 334467799999999999998877654211 000111111222 246666665542 11378
Q ss_pred eeecCChhhHHHHH
Q 039436 346 FMSHCGWNSCMESI 359 (422)
Q Consensus 346 ~i~HgG~~s~~eal 359 (422)
...|+|||-+.|..
T Consensus 76 ~~i~pGyg~lse~~ 89 (110)
T PF00289_consen 76 DAIHPGYGFLSENA 89 (110)
T ss_dssp SEEESTSSTTTTHH
T ss_pred cccccccchhHHHH
Confidence 89999999777763
No 290
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=21.51 E-value=68 Score=27.56 Aligned_cols=35 Identities=6% Similarity=-0.039 Sum_probs=27.1
Q ss_pred CccCHHHHHHHHHHHHhCCCcEEEEeCCCCchhhh
Q 039436 6 AQGHLNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQ 40 (422)
Q Consensus 6 ~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~ 40 (422)
+.....-...|.+.|.++|++|.++.++...+.+.
T Consensus 9 Gs~~a~~~~~ll~~L~~~g~~V~vi~T~~A~~fi~ 43 (177)
T TIGR02113 9 GSIAAYKAADLTSQLTKLGYDVTVLMTQAATQFIT 43 (177)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEEChHHHhhcc
Confidence 34445666799999999999999999887655554
No 291
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=21.41 E-value=87 Score=29.52 Aligned_cols=29 Identities=10% Similarity=0.109 Sum_probs=25.5
Q ss_pred ccCHHHHHHHHHHHHhCCCcEEEEeCCCC
Q 039436 7 QGHLNQLLQLSRLVLSYNIPVHYVGSAVH 35 (422)
Q Consensus 7 ~GHv~P~l~La~~L~~~Gh~Vt~~t~~~~ 35 (422)
.|+-.=...|++.|.++||+|++++....
T Consensus 13 gG~~~~~~~l~~~l~~~G~~v~v~~~~~~ 41 (365)
T cd03825 13 GGAARAAYRLHRALQAAGVDSTMLVQEKK 41 (365)
T ss_pred CcHHHHHHHHHHHHHhcCCceeEEEeecc
Confidence 67788899999999999999999997654
No 292
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=21.31 E-value=86 Score=31.62 Aligned_cols=21 Identities=10% Similarity=0.184 Sum_probs=18.9
Q ss_pred HHHHHHHHhCCCcEEEEeCCC
Q 039436 14 LQLSRLVLSYNIPVHYVGSAV 34 (422)
Q Consensus 14 l~La~~L~~~Gh~Vt~~t~~~ 34 (422)
..||+++..+|++||+++++.
T Consensus 286 ~alA~aa~~~GA~VtlI~Gp~ 306 (475)
T PRK13982 286 FAIAAAAAAAGAEVTLISGPV 306 (475)
T ss_pred HHHHHHHHHCCCcEEEEeCCc
Confidence 478999999999999999875
No 293
>TIGR00234 tyrS tyrosyl-tRNA synthetase. This tyrosyl-tRNA synthetase model starts picking up tryptophanyl-tRNA synthetases at scores of 0 and below. The proteins found by this model have a deep split between two groups. One group contains bacterial and organellar eukaryotic examples. The other contains archaeal and cytosolic eukaryotic examples.
Probab=21.21 E-value=90 Score=30.48 Aligned_cols=28 Identities=29% Similarity=0.215 Sum_probs=22.3
Q ss_pred CccCHHHHHHHHHHHHhCCCcEEEEeCCC
Q 039436 6 AQGHLNQLLQLSRLVLSYNIPVHYVGSAV 34 (422)
Q Consensus 6 ~~GHv~P~l~La~~L~~~Gh~Vt~~t~~~ 34 (422)
--||+.|+..| +.|++.||+|.++....
T Consensus 45 HlGh~v~l~~l-~~lq~~G~~~~iligd~ 72 (377)
T TIGR00234 45 HLGHLVPLLKL-RDFQQAGHEVIVLLGDA 72 (377)
T ss_pred cHHHHHHHHHH-HHHHHCCCcEEEEEecc
Confidence 45999997665 68889999999887544
No 294
>TIGR03272 methan_mark_6 putative methanogenesis marker protein 6. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=21.16 E-value=2e+02 Score=23.21 Aligned_cols=48 Identities=15% Similarity=0.245 Sum_probs=37.6
Q ss_pred CCccccHHHhhcccCCcceEE---ecCCcccCcHHHHHHHHHHHhhCCCeeEE
Q 039436 244 NGRHFCLEWLDKQEKNSVLYV---SFGTTTAMSDEQIKELAVGLKQSNQKFIW 293 (422)
Q Consensus 244 ~~~~~~~~wl~~~~~~~vv~v---s~Gs~~~~~~~~~~~~~~~l~~~~~~~v~ 293 (422)
..+.++..|+.....+ |-| |||.+.....+.+.++++.++..+..-|.
T Consensus 9 vsPs~l~~~~~~l~~~--v~iKETCfG~~i~G~~e~V~~~v~~iR~ld~~~IF 59 (132)
T TIGR03272 9 VSPKELVQKLYELELP--VTIKETCFGAIITGPEEEVMKVAERIRELDPNHIF 59 (132)
T ss_pred cCHHHHHHHHHhcCCC--ceeeeeeeeeeeeCCHHHHHHHHHHHHhhCCCceE
Confidence 3567888888876544 444 99999999999999999999987655443
No 295
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=21.03 E-value=96 Score=31.98 Aligned_cols=28 Identities=21% Similarity=0.303 Sum_probs=24.6
Q ss_pred ccCHHHHHH---HHHHHHhCCCcEEEEeCCC
Q 039436 7 QGHLNQLLQ---LSRLVLSYNIPVHYVGSAV 34 (422)
Q Consensus 7 ~GHv~P~l~---La~~L~~~Gh~Vt~~t~~~ 34 (422)
-||+.++|. +||-++-+|++|.|+|..+
T Consensus 22 lGH~~~~l~ADv~aRy~Rl~G~~v~fvtGtD 52 (558)
T COG0143 22 LGHLYTYLAADVYARYLRLRGYEVFFLTGTD 52 (558)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCeEEEEeccC
Confidence 499998885 8999999999999999865
No 296
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=21.00 E-value=4.1e+02 Score=26.99 Aligned_cols=79 Identities=14% Similarity=0.062 Sum_probs=51.3
Q ss_pred eEEecccchhhhhh-cccccceeec---CChh-hHHHHHhcCC----cEEccCcccchhhHHHHHHhhcCeEEEEeeccc
Q 039436 326 LVVRDWAPQLEILA-HCSTGGFMSH---CGWN-SCMESITMGV----PIVAWPMHSDQPRNTLLITHLLKLGLVMADWAR 396 (422)
Q Consensus 326 ~~~~~~~pq~~il~-~~~~~~~i~H---gG~~-s~~eal~~Gv----P~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~ 396 (422)
+.+.+.+|+..+.+ ...+++++.- -|+| ...|.++++. |+|.==+.+ |. .+ +.-++.+.
T Consensus 364 ~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaG-----aa--~~-l~~AllVN---- 431 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAG-----AA--VE-LKGALLTN---- 431 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEecccc-----ch--hh-cCCCEEEC----
Confidence 45557788887665 3446666654 4888 4459999877 444433322 22 33 55567776
Q ss_pred cccccCHHHHHHHHHHHhcCCcc
Q 039436 397 RDEIVTSNVIENAVKRLMASKEG 419 (422)
Q Consensus 397 ~~~~~~~~~l~~av~~~l~~~~~ 419 (422)
..+.++++++|.+.|+.+..
T Consensus 432 ---P~d~~~~A~ai~~AL~m~~~ 451 (487)
T TIGR02398 432 ---PYDPVRMDETIYVALAMPKA 451 (487)
T ss_pred ---CCCHHHHHHHHHHHHcCCHH
Confidence 46889999999999986643
No 297
>PRK08327 acetolactate synthase catalytic subunit; Validated
Probab=20.39 E-value=4.6e+02 Score=27.18 Aligned_cols=29 Identities=10% Similarity=0.241 Sum_probs=22.8
Q ss_pred cccceeecCCh------hhHHHHHhcCCcEEccCc
Q 039436 342 STGGFMSHCGW------NSCMESITMGVPIVAWPM 370 (422)
Q Consensus 342 ~~~~~i~HgG~------~s~~eal~~GvP~v~~P~ 370 (422)
+.+++++|.|- +.+.+|...++|+|++--
T Consensus 75 k~gv~~~t~GPG~~N~~~gla~A~~d~~Pvl~I~G 109 (569)
T PRK08327 75 KPQAVMVHVDVGTANALGGVHNAARSRIPVLVFAG 109 (569)
T ss_pred CCeEEEEecCHHHHHHHHHHHHHhhcCCCEEEEec
Confidence 35677888774 478899999999998843
No 298
>PF14626 RNase_Zc3h12a_2: Zc3h12a-like Ribonuclease NYN domain
Probab=20.11 E-value=97 Score=24.58 Aligned_cols=31 Identities=3% Similarity=-0.088 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeCCCCchhhh
Q 039436 10 LNQLLQLSRLVLSYNIPVHYVGSAVHNRQAQ 40 (422)
Q Consensus 10 v~P~l~La~~L~~~Gh~Vt~~t~~~~~~~~~ 40 (422)
+.|++.+.-...-+||+++++-+..|...+.
T Consensus 9 Vk~L~eIll~FilrGHKT~vyLP~yY~~~~~ 39 (122)
T PF14626_consen 9 VKALVEILLHFILRGHKTVVYLPKYYKNYVD 39 (122)
T ss_pred HHHHHHHHHHHHhccCeeEEEChHHHhcccc
Confidence 6788999999999999999999988776554
No 299
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=20.09 E-value=78 Score=26.86 Aligned_cols=30 Identities=23% Similarity=0.318 Sum_probs=18.8
Q ss_pred hHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHHHHhcC
Q 039436 376 RNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVKRLMAS 416 (422)
Q Consensus 376 ~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~~~l~~ 416 (422)
+.+.+=.+ -|+|+.+ |+|+|.++|+++++.
T Consensus 103 d~~~Fe~~-cGVGV~V----------T~E~I~~~V~~~i~~ 132 (164)
T PF04558_consen 103 DVAEFEKA-CGVGVVV----------TPEQIEAAVEKYIEE 132 (164)
T ss_dssp -HHHHHHT-TTTT--------------HHHHHHHHHHHHHH
T ss_pred CHHHHHHH-cCCCeEE----------CHHHHHHHHHHHHHH
Confidence 33444444 7999877 789999999999873
No 300
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase. Members of this family are examples of pyruvate oxidase (EC 1.2.3.3), an enzyme with FAD and TPP as cofactors that catalyzes the reaction pyruvate + phosphate + O2 + H2O = acetyl phosphate + CO2 + H2O2. It should not be confused with pyruvate dehydrogenase [cytochrome] (EC 1.2.2.2) as in E. coli PoxB, although the E. coli enzyme is closely homologous and has pyruvate oxidase as an alternate name.
Probab=20.08 E-value=2.3e+02 Score=29.42 Aligned_cols=27 Identities=22% Similarity=0.318 Sum_probs=22.6
Q ss_pred ccceeecCC------hhhHHHHHhcCCcEEccC
Q 039436 343 TGGFMSHCG------WNSCMESITMGVPIVAWP 369 (422)
Q Consensus 343 ~~~~i~HgG------~~s~~eal~~GvP~v~~P 369 (422)
.+++++|.| .+.+.+|...++|+|++-
T Consensus 64 ~gv~~~t~GPG~~n~~~~i~~A~~~~~Pvl~I~ 96 (575)
T TIGR02720 64 IGVCFGSAGPGATHLLNGLYDAKEDHVPVLALV 96 (575)
T ss_pred ceEEEeCCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 567888888 457899999999999994
No 301
>PRK06932 glycerate dehydrogenase; Provisional
Probab=20.03 E-value=4.7e+02 Score=24.74 Aligned_cols=101 Identities=13% Similarity=0.163 Sum_probs=64.5
Q ss_pred CcceEEecCCcccCcHHHHHHHHHHHhhCCCeeEEEEecCCCCCccccchhcccCChhhHhhccCCCeEEecccchhhhh
Q 039436 259 NSVLYVSFGTTTAMSDEQIKELAVGLKQSNQKFIWVLRDADRGDVFNGEVRRAELPKAYEDSVKDKGLVVRDWAPQLEIL 338 (422)
Q Consensus 259 ~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~pq~~il 338 (422)
+.+..|.+|++. +++++-++..|.+++.. .... .. .. ...+.+-..+|
T Consensus 148 ktvgIiG~G~IG-------~~va~~l~~fg~~V~~~-~~~~--------------~~---------~~-~~~~~~l~ell 195 (314)
T PRK06932 148 STLGVFGKGCLG-------TEVGRLAQALGMKVLYA-EHKG--------------AS---------VC-REGYTPFEEVL 195 (314)
T ss_pred CEEEEECCCHHH-------HHHHHHHhcCCCEEEEE-CCCc--------------cc---------cc-ccccCCHHHHH
Confidence 567899999887 45666666778887642 1110 00 00 11356778899
Q ss_pred hcccccceeecCChhhHHHHHhcCCcEEccCcccchhhHHHHHHhhcCeEEEEeeccccccccCHHHHHHHHH
Q 039436 339 AHCSTGGFMSHCGWNSCMESITMGVPIVAWPMHSDQPRNTLLITHLLKLGLVMADWARRDEIVTSNVIENAVK 411 (422)
Q Consensus 339 ~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~Dq~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~l~~av~ 411 (422)
+. ++.++.|+-.+.-. ....|+.++.. ++=|..+-+..+ ..-++.+.|.++++
T Consensus 196 ~~--sDiv~l~~Plt~~T----------------~~li~~~~l~~-mk~ga~lIN~aR-G~~Vde~AL~~aL~ 248 (314)
T PRK06932 196 KQ--ADIVTLHCPLTETT----------------QNLINAETLAL-MKPTAFLINTGR-GPLVDEQALLDALE 248 (314)
T ss_pred Hh--CCEEEEcCCCChHH----------------hcccCHHHHHh-CCCCeEEEECCC-ccccCHHHHHHHHH
Confidence 88 78898887654322 34678888877 677765543221 45688888888876
No 302
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=20.00 E-value=1.3e+02 Score=24.18 Aligned_cols=25 Identities=8% Similarity=0.025 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhCCCcEEEEeCCCCc
Q 039436 12 QLLQLSRLVLSYNIPVHYVGSAVHN 36 (422)
Q Consensus 12 P~l~La~~L~~~Gh~Vt~~t~~~~~ 36 (422)
..+...++|.++||.|.++|.....
T Consensus 28 ~~ie~L~~l~~~G~~IiiaTGR~~~ 52 (126)
T TIGR01689 28 AVIEKLRHYKALGFEIVISSSRNMR 52 (126)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCch
Confidence 5677777788999999999988654
No 303
>PRK12474 hypothetical protein; Provisional
Probab=20.00 E-value=4.5e+02 Score=26.79 Aligned_cols=27 Identities=19% Similarity=0.122 Sum_probs=21.6
Q ss_pred ccceeecCChh------hHHHHHhcCCcEEccC
Q 039436 343 TGGFMSHCGWN------SCMESITMGVPIVAWP 369 (422)
Q Consensus 343 ~~~~i~HgG~~------s~~eal~~GvP~v~~P 369 (422)
.+++++|.|-| .+.+|...++|+|++-
T Consensus 69 ~gv~~~t~GpG~~N~~~gl~~A~~d~~Pvl~i~ 101 (518)
T PRK12474 69 PAVTLLHLGPGLANGLANLHNARRAASPIVNIV 101 (518)
T ss_pred CEEEEEccchhHhHhHHHHHHHhhcCCCEEEEe
Confidence 55778888754 6778999999999884
Done!