Query 039441
Match_columns 539
No_of_seqs 247 out of 1160
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 16:28:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039441.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039441hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s7i_A Allergen ARA H 1, clone 100.0 6.7E-76 2.3E-80 625.1 33.0 350 159-513 2-417 (418)
2 2cav_A Protein (canavalin); vi 100.0 1.4E-73 4.9E-78 612.1 36.0 365 155-535 40-443 (445)
3 1uij_A Beta subunit of beta co 100.0 2.3E-72 7.9E-77 598.6 35.2 365 158-535 5-414 (416)
4 2ea7_A 7S globulin-1; beta bar 100.0 2.9E-72 9.9E-77 600.5 34.6 365 157-535 16-432 (434)
5 2phl_A Phaseolin; plant SEED s 100.0 2.1E-66 7.1E-71 549.0 29.7 340 156-530 6-396 (397)
6 3kgl_A Cruciferin; 11S SEED gl 100.0 4.7E-66 1.6E-70 554.0 32.4 312 172-515 18-454 (466)
7 3qac_A 11S globulin SEED stora 100.0 7.7E-66 2.6E-70 552.3 32.4 312 172-517 25-456 (465)
8 3ksc_A LEGA class, prolegumin; 100.0 1.3E-63 4.5E-68 538.6 34.7 312 172-517 21-491 (496)
9 2e9q_A 11S globulin subunit be 100.0 7.1E-63 2.4E-67 530.5 31.8 311 173-517 39-455 (459)
10 3fz3_A Prunin; TREE NUT allerg 100.0 4.9E-62 1.7E-66 526.4 32.0 311 172-516 23-526 (531)
11 1fxz_A Glycinin G1; proglycini 100.0 1.5E-59 5.1E-64 507.0 35.7 311 173-517 24-471 (476)
12 3c3v_A Arachin ARAH3 isoform; 100.0 3.5E-59 1.2E-63 505.9 35.1 312 172-517 23-505 (510)
13 2d5f_A Glycinin A3B4 subunit; 100.0 3E-55 1E-59 475.0 32.0 307 172-513 20-493 (493)
14 2vqa_A SLL1358 protein, MNCA; 100.0 1.8E-37 6.2E-42 321.4 32.3 310 163-511 20-357 (361)
15 1j58_A YVRK protein; cupin, de 100.0 3.2E-31 1.1E-35 277.3 31.1 302 164-504 48-375 (385)
16 1dgw_A Canavalin; duplicated s 100.0 2.3E-28 7.9E-33 231.7 17.6 164 322-513 2-177 (178)
17 3ksc_A LEGA class, prolegumin; 100.0 1.1E-28 3.8E-33 266.6 17.4 175 333-513 22-228 (496)
18 3kgl_A Cruciferin; 11S SEED gl 100.0 1.9E-28 6.4E-33 263.1 17.4 179 333-514 19-256 (466)
19 2d5f_A Glycinin A3B4 subunit; 100.0 1E-27 3.5E-32 259.8 17.8 187 323-512 9-239 (493)
20 3qac_A 11S globulin SEED stora 100.0 1.1E-27 3.7E-32 257.1 17.7 184 327-513 18-247 (465)
21 1dgw_A Canavalin; duplicated s 99.9 2.4E-27 8.2E-32 224.7 16.9 129 161-289 1-129 (178)
22 2e9q_A 11S globulin subunit be 99.9 2.7E-27 9.3E-32 254.5 17.3 182 327-514 31-246 (459)
23 3fz3_A Prunin; TREE NUT allerg 99.9 7.1E-27 2.4E-31 252.7 17.1 178 333-513 24-307 (531)
24 3c3v_A Arachin ARAH3 isoform; 99.9 4.7E-26 1.6E-30 247.0 16.8 178 333-513 24-281 (510)
25 1fxz_A Glycinin G1; proglycini 99.9 7E-26 2.4E-30 244.6 17.7 175 332-514 23-240 (476)
26 2phl_A Phaseolin; plant SEED s 99.9 5.7E-26 2E-30 240.2 16.1 170 324-519 12-201 (397)
27 3s7i_A Allergen ARA H 1, clone 99.9 4E-25 1.4E-29 235.2 17.4 154 324-503 5-170 (418)
28 2ea7_A 7S globulin-1; beta bar 99.9 1.1E-24 3.6E-29 233.2 18.5 169 324-518 21-212 (434)
29 2cav_A Protein (canavalin); vi 99.9 4.2E-24 1.4E-28 229.1 17.7 170 323-518 48-227 (445)
30 1uij_A Beta subunit of beta co 99.9 4.9E-24 1.7E-28 226.9 17.8 170 324-519 9-196 (416)
31 1fi2_A Oxalate oxidase, germin 99.9 4E-23 1.4E-27 198.8 19.1 155 322-503 34-196 (201)
32 1dgw_Y Canavalin; duplicated s 99.9 6.5E-22 2.2E-26 169.3 11.4 89 422-513 2-91 (93)
33 1dgw_X Canavalin; duplicated s 99.9 3.3E-22 1.1E-26 166.5 8.5 76 324-399 2-77 (79)
34 2d40_A Z3393, putative gentisa 99.9 1.7E-20 5.9E-25 195.7 20.8 260 160-462 51-340 (354)
35 2vqa_A SLL1358 protein, MNCA; 99.8 8.5E-20 2.9E-24 188.9 17.4 154 323-504 20-173 (361)
36 1y3t_A Hypothetical protein YX 99.8 6.8E-18 2.3E-22 172.0 27.4 257 160-463 12-293 (337)
37 1rc6_A Hypothetical protein YL 99.8 6.9E-17 2.4E-21 160.8 22.0 191 201-462 59-255 (261)
38 1juh_A Quercetin 2,3-dioxygena 99.7 7.6E-16 2.6E-20 160.2 26.3 221 207-461 53-325 (350)
39 3bu7_A Gentisate 1,2-dioxygena 99.7 1.2E-15 4.2E-20 161.1 25.8 266 159-462 73-369 (394)
40 3h7j_A Bacilysin biosynthesis 99.7 4.4E-16 1.5E-20 153.6 19.9 185 202-463 35-221 (243)
41 1sef_A Conserved hypothetical 99.7 8.3E-16 2.8E-20 154.3 21.4 189 201-461 62-257 (274)
42 1j58_A YVRK protein; cupin, de 99.7 8.4E-17 2.9E-21 168.1 14.0 150 324-503 48-197 (385)
43 3rns_A Cupin 2 conserved barre 99.7 2.2E-15 7.7E-20 147.2 22.0 187 200-459 36-223 (227)
44 1sq4_A GLXB, glyoxylate-induce 99.6 1.4E-14 4.9E-19 146.2 21.2 195 200-462 67-266 (278)
45 4e2q_A Ureidoglycine aminohydr 99.6 9.6E-14 3.3E-18 139.6 23.3 191 199-462 68-261 (266)
46 1sfn_A Conserved hypothetical 99.6 3E-13 1E-17 133.9 24.4 190 200-463 49-241 (246)
47 3nw4_A Gentisate 1,2-dioxygena 99.6 2.1E-13 7.3E-18 142.7 23.2 223 199-462 101-351 (368)
48 1fi2_A Oxalate oxidase, germin 99.3 4E-11 1.4E-15 115.0 14.1 102 179-287 53-161 (201)
49 3h8u_A Uncharacterized conserv 99.0 1.3E-09 4.5E-14 95.3 10.5 79 357-463 38-116 (125)
50 3myx_A Uncharacterized protein 99.0 6E-08 2E-12 96.0 23.1 183 199-449 45-228 (238)
51 1x82_A Glucose-6-phosphate iso 99.0 2.9E-09 1E-13 101.4 13.2 83 357-463 66-156 (190)
52 1v70_A Probable antibiotics sy 99.0 4.1E-09 1.4E-13 87.7 12.4 79 355-462 25-103 (105)
53 1lr5_A Auxin binding protein 1 99.0 2E-09 6.8E-14 99.1 11.0 84 197-280 37-125 (163)
54 3h8u_A Uncharacterized conserv 99.0 1.5E-09 5.2E-14 94.9 9.8 78 200-281 38-116 (125)
55 2oa2_A BH2720 protein; 1017534 99.0 3.4E-09 1.2E-13 96.3 12.2 85 356-463 41-125 (148)
56 1lr5_A Auxin binding protein 1 99.0 2E-09 6.7E-14 99.1 10.1 86 357-463 40-126 (163)
57 3l2h_A Putative sugar phosphat 98.9 3E-09 1E-13 97.7 10.7 79 356-463 44-124 (162)
58 3l2h_A Putative sugar phosphat 98.9 3.3E-09 1.1E-13 97.4 11.0 80 197-281 42-124 (162)
59 3lag_A Uncharacterized protein 98.9 1.6E-09 5.4E-14 92.8 7.4 81 354-460 13-93 (98)
60 1v70_A Probable antibiotics sy 98.9 6.9E-09 2.4E-13 86.3 10.8 76 200-280 27-103 (105)
61 2gu9_A Tetracenomycin polyketi 98.9 7.5E-09 2.6E-13 87.7 11.2 78 200-282 20-100 (113)
62 2gu9_A Tetracenomycin polyketi 98.9 1.2E-08 4.2E-13 86.4 12.1 80 355-463 18-99 (113)
63 2xlg_A SLL1785 protein, CUCA; 98.9 6.1E-09 2.1E-13 103.2 11.3 104 337-460 25-137 (239)
64 3ibm_A Cupin 2, conserved barr 98.9 8.7E-09 3E-13 96.2 11.7 80 199-282 54-133 (167)
65 2b8m_A Hypothetical protein MJ 98.9 9.9E-09 3.4E-13 88.8 11.2 75 200-279 26-101 (117)
66 1x82_A Glucose-6-phosphate iso 98.9 1.3E-08 4.4E-13 96.9 12.4 81 200-281 66-156 (190)
67 3ibm_A Cupin 2, conserved barr 98.9 1.3E-08 4.5E-13 94.9 11.9 78 356-463 54-132 (167)
68 3fjs_A Uncharacterized protein 98.9 1.8E-08 6.2E-13 87.8 11.6 76 199-279 34-109 (114)
69 2fqp_A Hypothetical protein BP 98.8 1.2E-08 4.1E-13 86.0 9.9 79 356-461 16-94 (97)
70 2oa2_A BH2720 protein; 1017534 98.8 2.2E-08 7.4E-13 90.9 11.9 83 200-283 42-127 (148)
71 4e2g_A Cupin 2 conserved barre 98.8 3.3E-08 1.1E-12 86.3 12.6 75 200-280 40-114 (126)
72 2b8m_A Hypothetical protein MJ 98.8 2.2E-08 7.7E-13 86.5 11.3 76 357-462 26-102 (117)
73 2l37_A Ribosome-inactivating p 98.8 2.9E-09 9.8E-14 78.2 4.4 41 99-139 1-41 (43)
74 3ht1_A REMF protein; cupin fol 98.8 1.4E-08 4.7E-13 90.4 9.0 80 199-281 37-116 (145)
75 4e2g_A Cupin 2 conserved barre 98.8 4.3E-08 1.5E-12 85.5 12.0 76 356-462 39-114 (126)
76 2bnm_A Epoxidase; oxidoreducta 98.8 4.5E-08 1.5E-12 92.3 12.6 77 201-278 117-197 (198)
77 3i7d_A Sugar phosphate isomera 98.8 2.5E-08 8.5E-13 92.5 10.6 99 333-463 21-122 (163)
78 2fqp_A Hypothetical protein BP 98.8 1.5E-08 5E-13 85.5 8.2 77 199-278 16-93 (97)
79 3kgz_A Cupin 2 conserved barre 98.8 5.1E-08 1.7E-12 90.3 11.9 78 356-463 42-119 (156)
80 3cew_A Uncharacterized cupin p 98.8 4.4E-08 1.5E-12 85.8 10.8 82 353-463 21-103 (125)
81 4i4a_A Similar to unknown prot 98.8 5.7E-08 1.9E-12 85.0 11.5 77 356-462 32-108 (128)
82 2pfw_A Cupin 2, conserved barr 98.8 4.5E-08 1.5E-12 84.1 10.7 73 201-280 34-106 (116)
83 3i7d_A Sugar phosphate isomera 98.8 3.5E-08 1.2E-12 91.6 10.6 80 197-281 39-122 (163)
84 3ht1_A REMF protein; cupin fol 98.7 4.2E-08 1.4E-12 87.2 10.7 80 356-463 37-116 (145)
85 1o4t_A Putative oxalate decarb 98.7 3.4E-08 1.2E-12 88.1 10.1 75 357-460 56-130 (133)
86 3kgz_A Cupin 2 conserved barre 98.7 2.7E-08 9.3E-13 92.1 9.7 78 199-281 42-119 (156)
87 3jzv_A Uncharacterized protein 98.7 3.2E-08 1.1E-12 92.6 9.9 77 199-280 51-127 (166)
88 3jzv_A Uncharacterized protein 98.7 7.4E-08 2.5E-12 90.1 12.1 78 356-463 51-128 (166)
89 4i4a_A Similar to unknown prot 98.7 5.8E-08 2E-12 84.9 10.5 73 201-278 34-106 (128)
90 3lag_A Uncharacterized protein 98.7 1.7E-08 5.8E-13 86.3 6.4 76 200-277 16-92 (98)
91 2f4p_A Hypothetical protein TM 98.7 8.4E-08 2.9E-12 87.3 11.3 97 356-488 46-142 (147)
92 3lwc_A Uncharacterized protein 98.7 6.5E-08 2.2E-12 85.6 10.2 74 200-280 39-112 (119)
93 1vj2_A Novel manganese-contain 98.7 4.9E-08 1.7E-12 86.0 9.3 79 355-463 45-123 (126)
94 2bnm_A Epoxidase; oxidoreducta 98.7 2E-07 6.7E-12 87.9 14.0 81 354-460 113-197 (198)
95 2d40_A Z3393, putative gentisa 98.7 5.1E-08 1.7E-12 101.5 10.8 77 357-462 99-175 (354)
96 3cew_A Uncharacterized cupin p 98.7 9.7E-08 3.3E-12 83.6 10.9 79 199-282 24-104 (125)
97 1vj2_A Novel manganese-contain 98.7 4.8E-08 1.6E-12 86.1 8.9 76 200-280 47-122 (126)
98 2ozi_A Hypothetical protein RP 98.7 4.1E-08 1.4E-12 84.2 8.1 81 355-461 14-94 (98)
99 1o4t_A Putative oxalate decarb 98.7 1.9E-07 6.5E-12 83.2 12.8 73 201-278 57-130 (133)
100 1yhf_A Hypothetical protein SP 98.7 1.2E-07 4.2E-12 81.1 10.9 64 200-267 39-102 (115)
101 2pfw_A Cupin 2, conserved barr 98.7 3.7E-07 1.3E-11 78.2 13.9 74 357-462 33-106 (116)
102 1y9q_A Transcriptional regulat 98.7 8.5E-08 2.9E-12 90.2 10.6 75 200-280 103-179 (192)
103 2f4p_A Hypothetical protein TM 98.7 1.1E-07 3.9E-12 86.4 10.8 77 200-280 47-123 (147)
104 3fjs_A Uncharacterized protein 98.6 9.9E-08 3.4E-12 83.1 9.5 72 355-456 33-104 (114)
105 2o8q_A Hypothetical protein; c 98.6 1.2E-07 4.1E-12 83.8 9.7 76 202-282 44-120 (134)
106 2l37_A Ribosome-inactivating p 98.6 4E-08 1.4E-12 72.1 5.4 34 45-78 1-41 (43)
107 2ozi_A Hypothetical protein RP 98.6 9.9E-08 3.4E-12 81.8 8.6 78 199-278 15-93 (98)
108 2q30_A Uncharacterized protein 98.6 4.9E-07 1.7E-11 76.3 12.7 75 355-459 30-105 (110)
109 1yhf_A Hypothetical protein SP 98.6 3.7E-07 1.3E-11 78.1 12.1 76 356-463 38-113 (115)
110 2o8q_A Hypothetical protein; c 98.6 9.3E-08 3.2E-12 84.6 8.4 74 360-462 45-118 (134)
111 2q30_A Uncharacterized protein 98.6 1.8E-07 6.3E-12 79.0 9.7 75 200-280 32-108 (110)
112 2qnk_A 3-hydroxyanthranilate 3 98.6 1.5E-06 5.2E-11 87.3 17.4 203 214-463 44-279 (286)
113 3o14_A Anti-ecfsigma factor, C 98.6 5.6E-07 1.9E-11 88.2 13.9 163 201-455 43-207 (223)
114 3lwc_A Uncharacterized protein 98.6 3.1E-07 1.1E-11 81.2 10.9 73 356-460 38-110 (119)
115 1y9q_A Transcriptional regulat 98.6 2.9E-07 9.9E-12 86.5 11.2 79 354-463 100-180 (192)
116 2ozj_A Cupin 2, conserved barr 98.6 2.4E-07 8.2E-12 79.6 9.7 72 200-278 37-108 (114)
117 3h7j_A Bacilysin biosynthesis 98.6 1.9E-07 6.4E-12 91.8 10.1 77 200-281 144-221 (243)
118 2xlg_A SLL1785 protein, CUCA; 98.6 1.6E-07 5.5E-12 93.0 9.5 78 200-278 42-137 (239)
119 2opk_A Hypothetical protein; p 98.6 2.5E-07 8.4E-12 80.5 9.4 61 217-279 49-109 (112)
120 1sef_A Conserved hypothetical 98.5 2.8E-07 9.5E-12 92.2 10.8 76 200-279 181-257 (274)
121 1rc6_A Hypothetical protein YL 98.5 2.3E-07 7.9E-12 92.0 10.0 77 200-280 178-255 (261)
122 1y3t_A Hypothetical protein YX 98.5 6E-07 2.1E-11 91.0 12.6 78 356-463 44-121 (337)
123 2vpv_A Protein MIF2, MIF2P; nu 98.5 2.5E-07 8.5E-12 86.9 8.8 105 162-277 53-161 (166)
124 4axo_A EUTQ, ethanolamine util 98.5 4.6E-07 1.6E-11 83.9 10.1 76 200-284 65-140 (151)
125 3es1_A Cupin 2, conserved barr 98.5 2.4E-07 8.2E-12 87.5 8.1 79 199-282 77-155 (172)
126 3bu7_A Gentisate 1,2-dioxygena 98.5 5.7E-07 2E-11 95.0 11.7 78 355-461 120-198 (394)
127 4h7l_A Uncharacterized protein 98.5 1.6E-06 5.3E-11 80.8 12.6 99 325-463 19-119 (157)
128 2pyt_A Ethanolamine utilizatio 98.5 4.4E-07 1.5E-11 81.8 8.7 73 200-281 56-128 (133)
129 3nw4_A Gentisate 1,2-dioxygena 98.4 6.4E-07 2.2E-11 93.9 10.7 77 356-461 101-177 (368)
130 1vr3_A Acireductone dioxygenas 98.4 1.8E-06 6.3E-11 82.7 12.2 81 358-463 74-164 (191)
131 4e2q_A Ureidoglycine aminohydr 98.4 1.2E-06 4E-11 88.1 11.2 76 199-279 184-260 (266)
132 2vpv_A Protein MIF2, MIF2P; nu 98.4 1.5E-06 5.2E-11 81.6 10.5 73 358-459 88-161 (166)
133 3rns_A Cupin 2 conserved barre 98.4 1.1E-06 3.7E-11 85.5 9.8 64 200-267 152-216 (227)
134 2ozj_A Cupin 2, conserved barr 98.4 1.5E-06 5.3E-11 74.5 9.5 72 357-460 37-108 (114)
135 3d82_A Cupin 2, conserved barr 98.3 1.2E-06 3.9E-11 73.0 8.2 68 359-459 32-99 (102)
136 2i45_A Hypothetical protein; n 98.3 8.3E-07 2.9E-11 75.4 7.2 70 360-460 30-99 (107)
137 1juh_A Quercetin 2,3-dioxygena 98.3 2E-06 6.8E-11 89.2 11.1 81 357-463 47-130 (350)
138 1sq4_A GLXB, glyoxylate-induce 98.3 1.5E-06 5.1E-11 87.5 9.8 78 199-281 189-267 (278)
139 2opk_A Hypothetical protein; p 98.3 7.2E-06 2.5E-10 71.2 12.8 80 354-461 27-109 (112)
140 3es1_A Cupin 2, conserved barr 98.3 1.3E-06 4.3E-11 82.5 8.5 77 357-463 78-154 (172)
141 4h7l_A Uncharacterized protein 98.3 1.3E-06 4.5E-11 81.3 8.4 67 209-284 53-122 (157)
142 2i45_A Hypothetical protein; n 98.3 1.1E-06 3.6E-11 74.8 6.9 64 206-276 33-97 (107)
143 1o5u_A Novel thermotoga mariti 98.3 1.3E-06 4.3E-11 75.3 7.2 59 205-268 35-93 (101)
144 2pyt_A Ethanolamine utilizatio 98.3 2.7E-06 9.2E-11 76.7 9.6 71 357-461 56-126 (133)
145 1sfn_A Conserved hypothetical 98.3 3.9E-06 1.3E-10 82.7 11.3 76 199-279 163-239 (246)
146 3d82_A Cupin 2, conserved barr 98.3 2.3E-06 7.9E-11 71.1 8.0 62 200-267 30-92 (102)
147 1vr3_A Acireductone dioxygenas 98.3 3E-06 1E-10 81.3 9.7 68 212-280 95-163 (191)
148 1zrr_A E-2/E-2' protein; nicke 98.2 4.7E-07 1.6E-11 86.0 4.0 68 212-280 91-158 (179)
149 3bcw_A Uncharacterized protein 98.2 1.3E-06 4.5E-11 77.9 5.8 66 199-268 47-112 (123)
150 1dgw_X Canavalin; duplicated s 98.2 2.2E-06 7.6E-11 71.0 6.5 71 166-241 4-77 (79)
151 4axo_A EUTQ, ethanolamine util 98.2 1E-05 3.5E-10 74.8 10.7 73 357-463 65-137 (151)
152 1zrr_A E-2/E-2' protein; nicke 98.2 1.3E-06 4.5E-11 82.9 4.9 68 370-463 92-159 (179)
153 4b29_A Dimethylsulfoniopropion 98.0 2.4E-05 8.2E-10 76.2 11.4 98 333-462 109-206 (217)
154 3st7_A Capsular polysaccharide 98.0 3.6E-05 1.2E-09 78.6 11.6 85 203-288 274-366 (369)
155 4b29_A Dimethylsulfoniopropion 98.0 2.5E-05 8.7E-10 76.1 9.7 75 199-278 130-204 (217)
156 1o5u_A Novel thermotoga mariti 97.9 1.4E-05 4.8E-10 68.6 6.5 69 358-457 31-99 (101)
157 3st7_A Capsular polysaccharide 97.9 4.4E-05 1.5E-09 78.0 10.4 81 358-462 272-355 (369)
158 1yfu_A 3-hydroxyanthranilate-3 97.9 4.5E-05 1.5E-09 71.8 9.3 59 209-267 43-101 (174)
159 3ebr_A Uncharacterized RMLC-li 97.8 0.00011 3.8E-09 68.2 11.2 94 357-486 41-136 (159)
160 3bcw_A Uncharacterized protein 97.8 3E-05 1E-09 69.0 7.0 72 357-458 48-119 (123)
161 2arc_A ARAC, arabinose operon 97.7 0.0001 3.5E-09 65.9 9.0 59 215-277 32-90 (164)
162 1zvf_A 3-hydroxyanthranilate 3 97.6 0.00016 5.4E-09 68.1 9.2 59 209-267 42-104 (176)
163 2o1q_A Putative acetyl/propion 97.6 7.9E-05 2.7E-09 67.8 6.6 98 358-489 44-142 (145)
164 2o1q_A Putative acetyl/propion 97.6 0.00017 5.9E-09 65.5 8.5 71 202-279 45-118 (145)
165 1tq5_A Protein YHHW; bicupin, 97.6 0.01 3.4E-07 58.6 21.3 180 207-463 47-230 (242)
166 2q1z_B Anti-sigma factor CHRR, 97.5 0.00014 4.6E-09 69.6 7.5 71 200-279 124-194 (195)
167 2vec_A YHAK, pirin-like protei 97.5 0.013 4.5E-07 58.4 21.4 191 197-461 59-254 (256)
168 2qjv_A Uncharacterized IOLB-li 97.5 0.028 9.4E-07 56.5 23.5 200 197-460 25-245 (270)
169 3ebr_A Uncharacterized RMLC-li 97.5 0.00025 8.5E-09 65.8 8.2 73 200-279 41-115 (159)
170 2q1z_B Anti-sigma factor CHRR, 97.5 0.00028 9.5E-09 67.4 8.5 70 357-460 124-193 (195)
171 3d0j_A Uncharacterized protein 97.5 0.00051 1.8E-08 62.5 9.6 70 367-460 38-108 (140)
172 3d0j_A Uncharacterized protein 97.4 0.00068 2.3E-08 61.7 10.1 56 212-267 40-100 (140)
173 3cjx_A Protein of unknown func 97.4 0.00037 1.3E-08 65.1 8.8 74 201-279 43-117 (165)
174 2arc_A ARAC, arabinose operon 97.4 0.0012 4.1E-08 58.9 10.9 62 371-462 31-93 (164)
175 2y0o_A Probable D-lyxose ketol 97.3 0.001 3.6E-08 62.8 10.1 93 358-463 53-155 (175)
176 1yfu_A 3-hydroxyanthranilate-3 97.3 0.0016 5.4E-08 61.3 11.2 59 366-450 43-101 (174)
177 3ejk_A DTDP sugar isomerase; Y 97.3 0.0058 2E-07 57.6 15.0 82 363-462 58-142 (174)
178 3cjx_A Protein of unknown func 97.2 0.0012 4.2E-08 61.6 9.8 74 357-461 42-117 (165)
179 3es4_A Uncharacterized protein 97.2 0.0014 4.8E-08 57.9 9.2 63 201-267 42-104 (116)
180 3eqe_A Putative cystein deoxyg 97.0 0.0068 2.3E-07 56.9 12.7 87 357-463 68-154 (171)
181 2y0o_A Probable D-lyxose ketol 97.0 0.0025 8.5E-08 60.2 9.7 78 200-282 52-155 (175)
182 3eqe_A Putative cystein deoxyg 97.0 0.0043 1.5E-07 58.3 10.8 81 200-281 68-154 (171)
183 3myx_A Uncharacterized protein 97.0 0.0026 9E-08 62.8 9.7 64 200-267 166-229 (238)
184 1yud_A Hypothetical protein SO 96.9 0.011 3.7E-07 55.6 13.0 87 203-290 51-145 (170)
185 1yud_A Hypothetical protein SO 96.9 0.024 8.3E-07 53.2 15.2 114 357-501 48-165 (170)
186 1pmi_A PMI, phosphomannose iso 96.7 0.045 1.6E-06 58.5 17.5 64 358-449 357-423 (440)
187 1zvf_A 3-hydroxyanthranilate 3 96.7 0.0075 2.6E-07 56.8 9.8 68 367-457 43-110 (176)
188 1eyb_A Homogentisate 1,2-dioxy 96.7 0.0082 2.8E-07 64.2 11.2 162 218-389 175-375 (471)
189 3es4_A Uncharacterized protein 96.6 0.014 4.8E-07 51.5 10.6 69 358-459 42-111 (116)
190 2gm6_A Cysteine dioxygenase ty 96.6 0.015 5E-07 56.2 11.4 83 357-460 78-165 (208)
191 2pa7_A DTDP-6-deoxy-3,4-keto-h 96.5 0.036 1.2E-06 50.4 12.9 100 173-279 11-113 (141)
192 2p17_A Pirin-like protein; GK1 96.4 0.12 4E-06 51.9 17.5 183 209-463 47-244 (277)
193 2qnk_A 3-hydroxyanthranilate 3 96.4 0.0095 3.3E-07 59.9 9.2 54 371-450 44-97 (286)
194 2pa7_A DTDP-6-deoxy-3,4-keto-h 96.4 0.047 1.6E-06 49.7 13.0 101 334-463 12-115 (141)
195 1j1l_A Pirin; beta sandwich, c 96.4 0.54 1.9E-05 47.5 22.1 189 208-463 47-245 (290)
196 3gbg_A TCP pilus virulence reg 96.4 0.006 2.1E-07 59.6 7.4 51 214-266 22-72 (276)
197 3o14_A Anti-ecfsigma factor, C 96.3 0.012 4E-07 57.5 9.2 66 357-458 42-107 (223)
198 1vrb_A Putative asparaginyl hy 96.3 0.017 5.9E-07 59.6 10.9 96 363-460 145-252 (342)
199 3gbg_A TCP pilus virulence reg 96.3 0.021 7.3E-07 55.7 11.0 72 358-457 7-82 (276)
200 3ejk_A DTDP sugar isomerase; Y 96.3 0.072 2.5E-06 50.1 14.1 106 174-284 30-146 (174)
201 1qwr_A Mannose-6-phosphate iso 96.3 0.05 1.7E-06 55.7 14.0 59 358-448 251-309 (319)
202 3bal_A Acetylacetone-cleaving 96.3 0.0072 2.5E-07 55.9 7.0 76 356-460 44-119 (153)
203 1zx5_A Mannosephosphate isomer 96.2 0.036 1.2E-06 56.3 12.1 57 358-448 230-287 (300)
204 2wfp_A Mannose-6-phosphate iso 96.1 0.041 1.4E-06 58.0 12.6 60 357-448 323-382 (394)
205 4gjz_A Lysine-specific demethy 95.9 0.035 1.2E-06 52.5 10.1 87 363-450 128-225 (235)
206 2gm6_A Cysteine dioxygenase ty 95.9 0.047 1.6E-06 52.6 11.0 80 200-279 78-166 (208)
207 4gjz_A Lysine-specific demethy 95.9 0.015 5.3E-07 55.0 7.6 60 209-268 131-226 (235)
208 3eln_A Cysteine dioxygenase ty 95.7 0.12 4.2E-06 49.4 13.1 87 357-461 69-158 (200)
209 3eln_A Cysteine dioxygenase ty 95.7 0.07 2.4E-06 51.1 11.0 75 199-273 68-152 (200)
210 2xdv_A MYC-induced nuclear ant 95.5 0.087 3E-06 56.3 12.2 78 362-450 142-223 (442)
211 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 95.5 0.13 4.4E-06 48.8 12.0 75 366-460 56-135 (185)
212 3bal_A Acetylacetone-cleaving 95.5 0.022 7.6E-07 52.6 6.5 64 200-266 45-109 (153)
213 2lqx_A Trypsin inhibitor BWI-2 94.3 0.0028 9.5E-08 44.1 0.0 32 45-76 2-40 (41)
214 4diq_A Lysine-specific demethy 95.3 0.09 3.1E-06 56.9 11.5 92 362-462 167-264 (489)
215 2ixk_A DTDP-4-dehydrorhamnose 95.3 0.15 5.1E-06 48.3 11.8 75 366-460 57-136 (184)
216 1oi6_A PCZA361.16; epimerase, 95.2 0.25 8.6E-06 47.6 13.1 73 366-458 55-133 (205)
217 3d8c_A Hypoxia-inducible facto 95.1 0.055 1.9E-06 55.9 8.8 97 363-460 187-296 (349)
218 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 95.1 0.17 5.8E-06 48.5 11.5 73 366-459 68-141 (197)
219 1xru_A 4-deoxy-L-threo-5-hexos 95.1 3.3 0.00011 41.7 21.2 167 219-447 76-251 (282)
220 1wlt_A 176AA long hypothetical 95.0 0.2 6.8E-06 48.0 11.9 74 366-459 73-152 (196)
221 3al5_A HTYW5, JMJC domain-cont 95.0 0.11 3.9E-06 53.2 10.9 87 362-450 170-264 (338)
222 3ryk_A DTDP-4-dehydrorhamnose 94.9 0.15 5.1E-06 49.2 10.7 73 366-458 78-156 (205)
223 1dzr_A DTDP-4-dehydrorhamnose 94.9 0.25 8.4E-06 46.8 12.0 73 366-458 55-133 (183)
224 1vrb_A Putative asparaginyl hy 94.7 0.088 3E-06 54.3 9.0 64 204-267 143-242 (342)
225 1upi_A DTDP-4-dehydrorhamnose 94.5 0.41 1.4E-05 46.7 12.9 73 366-458 74-152 (225)
226 2c0z_A NOVW; isomerase, epimer 94.4 0.32 1.1E-05 47.2 11.8 74 366-458 63-141 (216)
227 3k2o_A Bifunctional arginine d 94.3 0.19 6.6E-06 51.7 10.5 83 367-451 181-281 (336)
228 4hn1_A Putative 3-epimerase in 94.2 0.58 2E-05 45.0 12.8 74 366-459 52-131 (201)
229 1ywk_A 4-deoxy-L-threo-5-hexos 94.0 1.8 6.3E-05 43.6 16.6 60 215-278 72-133 (289)
230 1dgw_Y Canavalin; duplicated s 93.7 0.11 3.7E-06 44.1 6.0 35 244-281 7-41 (93)
231 3d8c_A Hypoxia-inducible facto 93.6 0.19 6.6E-06 51.8 8.9 59 209-267 191-285 (349)
232 2yu1_A JMJC domain-containing 93.3 0.33 1.1E-05 52.1 10.3 89 366-457 204-296 (451)
233 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 93.2 0.65 2.2E-05 44.4 11.3 80 201-282 60-146 (197)
234 1wlt_A 176AA long hypothetical 93.1 0.71 2.4E-05 44.1 11.4 79 200-280 64-155 (196)
235 4diq_A Lysine-specific demethy 93.0 0.31 1.1E-05 52.7 9.5 70 209-278 172-263 (489)
236 3kv5_D JMJC domain-containing 92.9 0.28 9.6E-06 53.1 9.2 78 366-450 274-360 (488)
237 3al5_A HTYW5, JMJC domain-cont 92.9 0.12 4.1E-06 53.0 6.0 58 210-267 176-264 (338)
238 1oi6_A PCZA361.16; epimerase, 92.8 1.1 3.6E-05 43.2 12.1 104 174-281 18-138 (205)
239 2xdv_A MYC-induced nuclear ant 92.7 0.42 1.4E-05 51.0 10.2 66 209-274 147-231 (442)
240 1e5r_A Proline oxidase; oxidor 92.5 0.18 6E-06 51.2 6.6 71 207-280 97-175 (290)
241 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 92.5 0.86 2.9E-05 43.1 11.0 104 174-281 21-138 (185)
242 3kv4_A PHD finger protein 8; e 92.5 0.36 1.2E-05 51.6 9.3 91 363-456 236-330 (447)
243 3ryk_A DTDP-4-dehydrorhamnose 92.4 0.8 2.7E-05 44.1 10.7 74 209-284 78-164 (205)
244 1upi_A DTDP-4-dehydrorhamnose 92.4 1.4 4.7E-05 43.1 12.4 106 174-283 38-159 (225)
245 3uss_A Putative uncharacterize 92.3 0.86 3E-05 44.0 10.9 74 200-273 72-154 (211)
246 2ixk_A DTDP-4-dehydrorhamnose 92.3 0.87 3E-05 43.0 10.7 104 174-281 21-139 (184)
247 3k2o_A Bifunctional arginine d 92.3 0.5 1.7E-05 48.7 9.7 60 209-268 179-281 (336)
248 3k3o_A PHF8, PHD finger protei 92.2 0.28 9.7E-06 51.3 7.8 80 363-449 152-240 (371)
249 2c0z_A NOVW; isomerase, epimer 91.8 1.4 5E-05 42.6 11.8 107 173-283 26-148 (216)
250 1dzr_A DTDP-4-dehydrorhamnose 91.8 1.7 5.9E-05 40.9 12.1 80 201-282 47-139 (183)
251 3kv9_A JMJC domain-containing 91.7 0.5 1.7E-05 49.8 9.1 81 363-449 179-268 (397)
252 3uss_A Putative uncharacterize 91.4 1.6 5.6E-05 42.0 11.7 82 357-460 72-159 (211)
253 3pua_A GRC5, PHD finger protei 91.1 0.52 1.8E-05 49.6 8.4 87 362-450 178-268 (392)
254 3kv4_A PHD finger protein 8; e 90.9 0.48 1.6E-05 50.7 8.0 66 201-268 232-326 (447)
255 3loi_A Putative uncharacterize 90.7 6 0.0002 37.0 14.4 112 358-501 53-168 (172)
256 1pmi_A PMI, phosphomannose iso 90.7 0.98 3.3E-05 48.2 10.2 65 199-266 355-423 (440)
257 3rcq_A Aspartyl/asparaginyl be 90.5 1.3 4.6E-05 42.2 10.0 71 202-279 103-180 (197)
258 2yu1_A JMJC domain-containing 90.4 0.6 2.1E-05 50.0 8.2 61 208-268 202-291 (451)
259 1eyb_A Homogentisate 1,2-dioxy 90.1 2.4 8.2E-05 45.4 12.4 86 339-458 140-226 (471)
260 3kv5_D JMJC domain-containing 89.8 0.62 2.1E-05 50.4 7.8 60 208-267 272-360 (488)
261 3k3o_A PHF8, PHD finger protei 89.4 0.4 1.4E-05 50.2 5.8 60 208-267 153-241 (371)
262 1xe7_A YML079WP, hypothetical 89.4 9.8 0.00034 36.5 15.0 113 358-501 79-198 (203)
263 3m3i_A Putative uncharacterize 88.9 6.6 0.00023 38.2 13.5 132 358-502 60-211 (225)
264 3pua_A GRC5, PHD finger protei 88.8 0.48 1.6E-05 49.9 5.8 65 201-267 175-268 (392)
265 2lqx_A Trypsin inhibitor BWI-2 88.3 0.085 2.9E-06 36.7 0.0 39 99-137 2-40 (41)
266 3pur_A Lysine-specific demethy 88.5 1 3.4E-05 49.1 8.2 87 362-450 300-390 (528)
267 4hn1_A Putative 3-epimerase in 87.5 3 0.0001 40.0 10.0 72 207-280 50-134 (201)
268 3bb6_A Uncharacterized protein 87.5 3.4 0.00012 36.8 9.7 73 182-270 11-92 (127)
269 3kv9_A JMJC domain-containing 87.4 0.81 2.8E-05 48.3 6.6 60 208-267 181-269 (397)
270 3pur_A Lysine-specific demethy 87.1 0.66 2.2E-05 50.5 5.8 59 209-267 304-390 (528)
271 3rcq_A Aspartyl/asparaginyl be 86.5 3.8 0.00013 39.1 10.2 79 359-462 103-182 (197)
272 1qwr_A Mannose-6-phosphate iso 86.1 1.2 4.2E-05 45.3 7.0 42 219-264 267-308 (319)
273 2wfp_A Mannose-6-phosphate iso 86.1 1.4 4.9E-05 46.2 7.6 60 198-263 321-380 (394)
274 2vec_A YHAK, pirin-like protei 84.9 4.5 0.00015 40.0 10.2 73 362-462 68-143 (256)
275 1e5r_A Proline oxidase; oxidor 84.1 2.5 8.5E-05 42.7 8.0 83 358-461 91-175 (290)
276 2oyz_A UPF0345 protein VPA0057 84.0 6.1 0.00021 33.5 9.1 71 357-459 22-92 (94)
277 2rg4_A Uncharacterized protein 84.0 3.8 0.00013 39.2 9.0 98 360-463 105-207 (216)
278 1zx5_A Mannosephosphate isomer 83.6 2.1 7.1E-05 43.3 7.2 58 199-264 228-286 (300)
279 2oyz_A UPF0345 protein VPA0057 83.1 2.7 9.3E-05 35.6 6.5 54 212-267 28-85 (94)
280 2p17_A Pirin-like protein; GK1 83.0 12 0.00042 37.1 12.6 100 161-267 125-233 (277)
281 1znp_A Hypothetical protein AT 82.8 24 0.00081 32.4 13.3 101 338-463 21-126 (154)
282 3dl3_A Tellurite resistance pr 82.6 8 0.00027 34.1 9.6 76 181-273 12-93 (119)
283 3bb6_A Uncharacterized protein 81.0 6.2 0.00021 35.2 8.4 74 367-463 23-102 (127)
284 3tnp_B CAMP-dependent protein 77.6 2.6 8.9E-05 43.9 5.8 50 204-253 169-219 (416)
285 3hqx_A UPF0345 protein aciad03 77.3 23 0.00079 30.8 10.6 71 359-459 38-108 (111)
286 2qdr_A Uncharacterized protein 76.7 64 0.0022 32.2 17.7 80 197-289 90-170 (303)
287 2pqq_A Putative transcriptiona 76.3 4.4 0.00015 34.2 6.0 51 204-254 29-81 (149)
288 3eo6_A Protein of unknown func 76.2 10 0.00035 32.8 8.0 69 358-458 36-104 (106)
289 1tq5_A Protein YHHW; bicupin, 75.8 17 0.00057 35.5 10.6 74 362-463 45-121 (242)
290 3mdp_A Cyclic nucleotide-bindi 75.3 4.4 0.00015 34.0 5.6 52 203-254 29-85 (142)
291 1o5l_A Transcriptional regulat 73.8 4.6 0.00016 37.1 5.8 51 204-254 23-75 (213)
292 2z69_A DNR protein; beta barre 73.5 4.2 0.00014 34.7 5.1 51 203-253 35-87 (154)
293 3eo6_A Protein of unknown func 73.0 7.2 0.00025 33.7 6.3 53 212-266 41-97 (106)
294 3dn7_A Cyclic nucleotide bindi 72.8 7 0.00024 35.0 6.7 50 205-254 32-83 (194)
295 2l2r_A Antimicrobial peptide e 72.8 2.9 0.0001 28.9 3.0 24 107-130 6-30 (37)
296 1pcq_O Groes protein; chaperon 72.0 7.4 0.00025 33.1 6.1 66 365-457 20-86 (97)
297 4ev0_A Transcription regulator 70.3 8.7 0.0003 34.8 6.8 51 204-254 23-75 (216)
298 3fx3_A Cyclic nucleotide-bindi 70.2 8.2 0.00028 35.7 6.7 51 204-254 35-87 (237)
299 1xe7_A YML079WP, hypothetical 69.9 26 0.0009 33.5 10.1 83 208-290 86-179 (203)
300 2oz6_A Virulence factor regula 69.8 9.5 0.00032 34.3 6.9 49 205-253 15-65 (207)
301 3b02_A Transcriptional regulat 69.7 8.1 0.00028 34.8 6.4 46 208-253 4-51 (195)
302 1ft9_A Carbon monoxide oxidati 68.6 22 0.00075 32.5 9.2 61 203-266 23-85 (222)
303 1j1l_A Pirin; beta sandwich, c 68.2 38 0.0013 33.9 11.4 96 200-306 168-265 (290)
304 3gyd_A CNMP-BD protein, cyclic 68.2 10 0.00034 34.3 6.7 51 203-253 62-114 (187)
305 3ryp_A Catabolite gene activat 68.1 9.7 0.00033 34.3 6.6 50 205-254 21-72 (210)
306 3iwz_A CAP-like, catabolite ac 66.5 12 0.00042 34.2 7.0 51 204-254 35-87 (230)
307 3dv8_A Transcriptional regulat 66.4 12 0.00043 33.8 7.0 50 204-253 27-78 (220)
308 3la7_A Global nitrogen regulat 66.4 11 0.00038 35.3 6.8 50 205-254 45-96 (243)
309 1znp_A Hypothetical protein AT 66.3 79 0.0027 28.9 12.2 79 209-289 48-135 (154)
310 3kmh_A D-lyxose isomerase; cup 66.1 63 0.0022 31.7 12.0 93 358-462 106-209 (246)
311 2zcw_A TTHA1359, transcription 65.8 10 0.00036 34.2 6.3 48 207-254 9-60 (202)
312 2fmy_A COOA, carbon monoxide o 65.5 29 0.00098 31.6 9.3 62 203-267 27-90 (220)
313 3e6c_C CPRK, cyclic nucleotide 65.3 13 0.00045 34.8 7.1 52 203-254 32-85 (250)
314 3loi_A Putative uncharacterize 65.2 26 0.00087 32.7 8.8 79 208-289 60-147 (172)
315 3dv8_A Transcriptional regulat 65.0 25 0.00086 31.7 8.8 125 360-510 26-199 (220)
316 3d0s_A Transcriptional regulat 64.9 13 0.00044 34.1 6.8 49 205-253 31-81 (227)
317 3e6c_C CPRK, cyclic nucleotide 64.9 24 0.00082 32.9 8.9 119 359-504 31-201 (250)
318 2gau_A Transcriptional regulat 64.4 8.8 0.0003 35.3 5.6 51 203-253 33-85 (232)
319 2qjv_A Uncharacterized IOLB-li 64.1 48 0.0017 33.0 11.1 95 337-457 11-106 (270)
320 2oz6_A Virulence factor regula 63.2 20 0.00068 32.1 7.7 75 360-460 13-96 (207)
321 3idb_B CAMP-dependent protein 63.2 13 0.00044 32.2 6.2 49 204-253 62-112 (161)
322 3e97_A Transcriptional regulat 63.0 10 0.00035 34.9 5.8 51 203-253 29-81 (231)
323 3c75_H MADH, methylamine dehyd 63.0 1.1E+02 0.0038 31.9 14.3 58 219-277 185-246 (426)
324 2rg4_A Uncharacterized protein 62.6 28 0.00096 33.1 8.8 66 208-273 110-200 (216)
325 3pna_A CAMP-dependent protein 61.9 16 0.00053 31.5 6.4 48 203-253 61-108 (154)
326 2pqq_A Putative transcriptiona 61.8 17 0.00057 30.5 6.5 75 360-460 28-107 (149)
327 1zyb_A Transcription regulator 61.4 11 0.00038 34.9 5.7 51 203-253 43-95 (232)
328 3hqx_A UPF0345 protein aciad03 61.2 24 0.00083 30.7 7.2 46 219-266 55-100 (111)
329 3m3i_A Putative uncharacterize 60.9 86 0.0029 30.4 11.8 83 207-289 66-189 (225)
330 2ptm_A Hyperpolarization-activ 60.6 14 0.00047 33.4 6.0 48 204-253 95-142 (198)
331 2fmy_A COOA, carbon monoxide o 60.6 28 0.00097 31.6 8.3 122 360-510 27-197 (220)
332 3ryp_A Catabolite gene activat 60.6 22 0.00074 31.9 7.4 75 360-460 19-99 (210)
333 2xxz_A Lysine-specific demethy 60.1 5.1 0.00017 41.2 3.3 23 246-268 282-304 (332)
334 3kcc_A Catabolite gene activat 59.5 16 0.00054 34.7 6.6 49 205-253 71-121 (260)
335 1o5l_A Transcriptional regulat 57.9 21 0.00071 32.6 6.8 77 358-460 20-102 (213)
336 3mdp_A Cyclic nucleotide-bindi 57.4 19 0.00063 30.0 6.0 55 360-438 29-86 (142)
337 1ft9_A Carbon monoxide oxidati 57.4 27 0.00094 31.8 7.6 116 360-504 23-187 (222)
338 3ocp_A PRKG1 protein; serine/t 56.6 18 0.00061 30.4 5.8 47 204-253 47-93 (139)
339 4f8a_A Potassium voltage-gated 56.2 21 0.00071 30.4 6.2 47 205-254 52-98 (160)
340 4ev0_A Transcription regulator 56.0 27 0.00091 31.5 7.2 125 360-510 22-193 (216)
341 2z69_A DNR protein; beta barre 55.3 15 0.00052 31.0 5.1 54 360-437 35-88 (154)
342 3la7_A Global nitrogen regulat 55.0 48 0.0016 30.8 9.0 82 353-460 36-124 (243)
343 3fx3_A Cyclic nucleotide-bindi 54.9 25 0.00087 32.3 7.0 75 360-460 34-113 (237)
344 3dn7_A Cyclic nucleotide bindi 54.6 28 0.00097 30.8 7.0 75 360-460 30-110 (194)
345 2e63_A KIAA1787 protein; struc 52.8 36 0.0012 31.5 7.5 67 199-267 65-141 (170)
346 3dkw_A DNR protein; CRP-FNR, H 52.8 9.1 0.00031 34.9 3.5 52 203-254 32-85 (227)
347 3kcc_A Catabolite gene activat 52.6 32 0.0011 32.5 7.5 76 359-460 68-149 (260)
348 2bgc_A PRFA; bacterial infecti 52.3 21 0.00071 33.2 5.9 49 207-256 22-72 (238)
349 2ypd_A Probable JMJC domain-co 51.8 14 0.00048 38.7 4.9 26 426-451 293-318 (392)
350 3iwz_A CAP-like, catabolite ac 51.8 32 0.0011 31.2 7.1 75 360-460 34-114 (230)
351 2ypd_A Probable JMJC domain-co 50.9 12 0.00043 39.1 4.4 24 244-267 294-317 (392)
352 2qcs_B CAMP-dependent protein 50.8 29 0.001 32.9 6.9 51 203-253 180-233 (291)
353 2d93_A RAP guanine nucleotide 50.4 14 0.00048 30.9 4.0 47 204-253 40-87 (134)
354 1wgp_A Probable cyclic nucleot 50.1 13 0.00046 30.9 3.9 49 204-253 30-82 (137)
355 3avr_A Lysine-specific demethy 49.8 9 0.00031 41.8 3.3 23 246-268 341-363 (531)
356 3gyd_A CNMP-BD protein, cyclic 49.8 31 0.0011 30.9 6.5 55 359-437 61-115 (187)
357 1vp6_A CNBD, cyclic-nucleotide 49.7 15 0.00052 30.5 4.1 45 204-253 35-79 (138)
358 3bpz_A Potassium/sodium hyperp 49.6 25 0.00086 31.8 5.9 47 204-253 96-142 (202)
359 2gau_A Transcriptional regulat 49.6 25 0.00087 32.1 6.0 121 359-505 32-205 (232)
360 3d0s_A Transcriptional regulat 49.4 39 0.0013 30.7 7.3 75 360-460 29-108 (227)
361 3e97_A Transcriptional regulat 49.0 46 0.0016 30.3 7.7 75 360-460 29-108 (231)
362 3b02_A Transcriptional regulat 48.7 30 0.001 30.9 6.3 116 364-505 3-164 (195)
363 1zyb_A Transcription regulator 48.0 29 0.001 32.0 6.2 119 360-504 43-210 (232)
364 3esg_A HUTD, putative uncharac 47.1 1.4E+02 0.005 28.1 10.8 83 335-449 24-109 (193)
365 4ask_A Lysine-specific demethy 46.8 11 0.00037 40.8 3.3 23 246-268 316-338 (510)
366 2zcw_A TTHA1359, transcription 45.7 31 0.0011 30.9 5.8 114 362-504 7-170 (202)
367 1yll_A PA5104, conserved hypot 43.2 1.8E+02 0.0061 27.5 10.9 83 334-449 18-104 (200)
368 1pcq_O Groes protein; chaperon 42.8 44 0.0015 28.2 5.8 48 210-259 22-71 (97)
369 2cmy_B Beta trypsin, veronica 42.3 5.9 0.0002 26.5 0.2 24 45-72 2-33 (34)
370 1we3_O CPN10(groes); chaperoni 41.9 37 0.0013 28.9 5.2 31 425-456 59-89 (100)
371 4ava_A Lysine acetyltransferas 41.3 48 0.0017 32.3 6.9 50 204-253 37-87 (333)
372 3of1_A CAMP-dependent protein 40.3 32 0.0011 31.4 5.1 48 204-253 149-196 (246)
373 3ukn_A Novel protein similar t 40.1 38 0.0013 30.7 5.6 49 203-254 98-146 (212)
374 3idb_B CAMP-dependent protein 40.1 46 0.0016 28.6 5.8 54 359-437 60-113 (161)
375 2qcs_B CAMP-dependent protein 39.6 47 0.0016 31.5 6.3 47 204-253 63-109 (291)
376 2bgc_A PRFA; bacterial infecti 39.5 1.4E+02 0.0048 27.3 9.6 75 360-460 18-99 (238)
377 3dl3_A Tellurite resistance pr 39.4 97 0.0033 27.1 7.6 70 369-463 27-100 (119)
378 1o7f_A CAMP-dependent RAP1 gua 38.5 43 0.0015 34.4 6.3 52 205-256 67-122 (469)
379 3of1_A CAMP-dependent protein 37.5 42 0.0014 30.7 5.4 46 205-253 32-77 (246)
380 3kmh_A D-lyxose isomerase; cup 37.2 1.2E+02 0.0039 29.9 8.5 69 200-268 105-197 (246)
381 3shr_A CGMP-dependent protein 33.4 49 0.0017 31.6 5.4 51 203-253 180-233 (299)
382 3nx6_A 10KDA chaperonin; bacte 32.2 65 0.0022 27.1 5.2 31 425-456 54-84 (95)
383 3dkw_A DNR protein; CRP-FNR, H 30.7 26 0.0009 31.8 2.8 122 360-507 32-205 (227)
384 2ptm_A Hyperpolarization-activ 28.5 96 0.0033 27.6 6.2 51 358-436 92-142 (198)
385 1pp9_H Ubiquinol-cytochrome C 28.4 89 0.003 25.4 5.2 34 41-74 10-46 (78)
386 3tgu_H Mitochondrial ubiquinol 27.7 1.3E+02 0.0045 24.3 6.1 41 34-74 2-45 (77)
387 4ava_A Lysine acetyltransferas 25.3 1.3E+02 0.0045 29.1 6.9 73 360-459 36-113 (333)
388 3shr_A CGMP-dependent protein 25.2 95 0.0032 29.5 5.8 169 206-437 65-234 (299)
389 3pna_A CAMP-dependent protein 24.1 1.8E+02 0.0062 24.4 6.9 34 360-394 61-94 (154)
390 4din_B CAMP-dependent protein 22.9 72 0.0025 32.3 4.6 49 205-253 273-324 (381)
391 3tnp_B CAMP-dependent protein 22.6 96 0.0033 31.9 5.5 51 203-253 290-348 (416)
392 1p3h_A 10 kDa chaperonin; beta 22.2 1.4E+02 0.0048 25.2 5.5 32 425-457 57-88 (99)
393 3ocp_A PRKG1 protein; serine/t 21.3 2.3E+02 0.008 23.1 6.9 32 360-392 46-77 (139)
394 2rqx_A PMRD, polymyxin B resis 21.2 99 0.0034 25.5 4.1 58 219-278 12-69 (89)
395 1o7f_A CAMP-dependent RAP1 gua 20.8 1.6E+02 0.0056 29.9 6.9 77 360-460 65-145 (469)
396 2qdr_A Uncharacterized protein 20.2 3.4E+02 0.012 27.1 8.5 71 355-459 88-159 (303)
No 1
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=100.00 E-value=6.7e-76 Score=625.09 Aligned_cols=350 Identities=40% Similarity=0.718 Sum_probs=306.2
Q ss_pred ccCCCceeecCccceeEecCCceEEEeeccCcccccccCcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEe
Q 039441 159 EENNPYYFHSQRFRYRVRSDSGHMRVLQRFSQKSHLLRGIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVS 238 (539)
Q Consensus 159 ~~~~py~f~~~~f~~~v~se~G~i~vl~~f~~~s~~l~gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~ 238 (539)
+.+|||||++++|+++|+||+|+|++|++||+++++|+||.+|+|+.++|+|+||++|||.||++|+||++|+|++|+|+
T Consensus 2 ~~~~p~~f~~~~f~~~~~se~G~i~~l~~f~~~s~~l~~l~~~~l~~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~ 81 (418)
T 3s7i_A 2 SRNNPFYFPSRRFSTRYGNQNGRIRVLQRFDQRSRQFQNLQNHRIVQIEAKPNTLVLPKHADADNILVIQQGQATVTVAN 81 (418)
T ss_dssp -CCCTTEECGGGEEEEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEEC
T ss_pred CCCCCcccccccccceEEcCCcEEEEecccCCcchhcccccceEEEEEEecCCceeeeeeCCCCeEEEEEEeeEEEEEEe
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCCCCcee-----------------------------
Q 039441 239 HERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPGQFRV----------------------------- 289 (539)
Q Consensus 239 pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg~f~~----------------------------- 289 (539)
+++..+++|++||||+||+|++|||+|+|+++.|+|+++++++++||.|..
T Consensus 82 ~~~~~~~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~gf~~evLa~af~v~~ 161 (418)
T 3s7i_A 82 GNNRKSFNLDEGHALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQGFSRNTLEAAFNAEF 161 (418)
T ss_dssp SSCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGGGSCHHHHHHHHTSCH
T ss_pred cCCEEEEEecCCCEEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhhcCCHHHHHHHHCcCH
Confidence 999999999999999999999999999988889999999998888865432
Q ss_pred --------cc--------------------ccCccEEEcChhhhhhcCccccccCCCC-C---CCCcceecCCCCCcccC
Q 039441 290 --------QQ--------------------RQQGTIKRASQEQLKALSHHASSRRRHG-R---GSTAPFNLLSRKPIYNN 337 (539)
Q Consensus 290 --------~~--------------------q~~G~Ivrv~~eql~~l~~~~~~~~~~~-~---~~~~~fnl~~~~p~~sn 337 (539)
++ +.+|.|+++++++++.|+++++++++.+ . ..+++|||.+++|.|+|
T Consensus 162 ~~v~kl~~~~~~~~~~~~~~~~~~~~~~~~q~~g~Iv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~nl~~~~p~~~n 241 (418)
T 3s7i_A 162 NEIRRVLLEENAGGEQEERGQRRWSTRSSENNEGVIVKVSKEHVEELTKHAKSVSKKGSEEEGDITNPINLREGEPDLSN 241 (418)
T ss_dssp HHHHHHTTSCC--------------------CCCSEEECCHHHHHHHHTTCBC--------CTTCCCCEETTCSCCSEEE
T ss_pred HHHHhhhcccccccccccccccccccccccccCCceEEcChhhhhhccccccccCCCCcCcccCCCcccccccCCCceeC
Confidence 11 2479999999999999987765432211 1 24789999999999999
Q ss_pred CCceEEEeCCccc-ccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhH---H
Q 039441 338 NFGRFFEATPKDY-QQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQE---E 413 (539)
Q Consensus 338 ~~G~i~~~~~~~f-P~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~---~ 413 (539)
.+|+++++++.+| |+|++++|++++++|.||||++|||||+|++|+||++|+|+++||+|+++..+++ +++++ +
T Consensus 242 ~~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~--~~~~~~~~~ 319 (418)
T 3s7i_A 242 NFGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRG--RREEEEDED 319 (418)
T ss_dssp TTEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC----------------
T ss_pred CCCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCcccccc--ccccccccc
Confidence 9999999999999 9999999999999999999999999999999999999999999999987631111 11111 1
Q ss_pred HHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecCCCCcccccccc-chhcccCcHHHHHHHcCC
Q 039441 414 EEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNARNNQRNFLAGK-INIMNQVERETMEVAFNV 492 (539)
Q Consensus 414 ~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na~n~~~~fLAG~-~svL~~~p~evLa~AF~v 492 (539)
+++++..++|++++.+|++|||||||+||+||++|++ +|+||+|.+++++|.+++|||+ +|||++||++|||+||++
T Consensus 320 ~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv~~~~~~evla~af~v 397 (418)
T 3s7i_A 320 EEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNVIDQIEKQAKDLAFPG 397 (418)
T ss_dssp -----CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBHHHHSCHHHHHHHSSS
T ss_pred cccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhhhhcCCHHHHHHHhCC
Confidence 1233346788999999999999999999999999974 4999999999989999999998 599999999999999999
Q ss_pred CHHHHHHhhcCCCCceeEecC
Q 039441 493 PARLIERVFGTNPKESYFVAG 513 (539)
Q Consensus 493 s~e~v~kL~~~q~e~~~fv~~ 513 (539)
+.++|++|+.+|+++ +|+++
T Consensus 398 ~~~~v~~L~~~q~e~-~~~~~ 417 (418)
T 3s7i_A 398 SGEQVEKLIKNQKES-HFVSA 417 (418)
T ss_dssp CHHHHHHHHHTCCSC-SEEEC
T ss_pred CHHHHHHHHhcCCcc-eeecC
Confidence 999999999999998 99976
No 2
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=100.00 E-value=1.4e-73 Score=612.10 Aligned_cols=365 Identities=35% Similarity=0.670 Sum_probs=291.5
Q ss_pred CcccccCCCceeecCccceeEecCCceEEEeeccCcccccccCcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEE
Q 039441 155 SEEEEENNPYYFHSQRFRYRVRSDSGHMRVLQRFSQKSHLLRGIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVI 234 (539)
Q Consensus 155 ~e~~~~~~py~f~~~~f~~~v~se~G~i~vl~~f~~~s~~l~gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i 234 (539)
+++++..|||+|+..+|++++++++|.|++|..|+.+++.|.++.++.++.++++|+++++|||+++++|+||++|+|++
T Consensus 40 ~~~~~~~~p~vf~~~~~~~~i~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v 119 (445)
T 2cav_A 40 EESRAQNNPYLFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAIL 119 (445)
T ss_dssp ------CCTTEECGGGEEEEEEETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEEEESSEEEEEEEESEEEE
T ss_pred cccCCCCCCeEEchhhcCceEEcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCcCCCCceEEEEEeCEEEE
Confidence 36677899999999999889999999999999999998999998889999999999999999999999999999999999
Q ss_pred EEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCCCCce---e----------------------
Q 039441 235 TLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPGQFR---V---------------------- 289 (539)
Q Consensus 235 ~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg~f~---~---------------------- 289 (539)
+++++++.++++|++||||+||+|++|||+|+|++++|++|++++++++||+|. +
T Consensus 120 ~~v~~~~~~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~~~~~~vLa~af 199 (445)
T 2cav_A 120 VLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSAFSKNFLEASY 199 (445)
T ss_dssp EEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGGSCHHHHHHHH
T ss_pred EEEeCCCCEEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhhcCCHHHHHHHh
Confidence 999999999999999999999999999999998668999999999998887543 1
Q ss_pred ------------ccccCccEEEcChhhhhhcCcccccc-CCCCCCCCcceecCCCCCcccCCCceEEEeCCccccccccc
Q 039441 290 ------------QQRQQGTIKRASQEQLKALSHHASSR-RRHGRGSTAPFNLLSRKPIYNNNFGRFFEATPKDYQQLQEI 356 (539)
Q Consensus 290 ------------~~q~~G~Ivrv~~eql~~l~~~~~~~-~~~~~~~~~~fnl~~~~p~~sn~~G~i~~~~~~~fP~L~~l 356 (539)
..+++|.|++++.++++.+.+++++. +.+......+|||.+++|+|+|.+|+++++++.+||+|+++
T Consensus 200 ~v~~~~v~~l~~~~~~~g~Iv~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~p~~~~~~G~v~~~~~~~fP~L~~l 279 (445)
T 2cav_A 200 DSPYDEIEQTLLQEEQEGVIVKMPKDQIQEISKHAQSSSRKTLSSQDKPFNLRSRDPIYSNNYGKLYEITPEKNSQLRDL 279 (445)
T ss_dssp TSCHHHHHHHTTSCCSSSSEEECCCC--------------------CCCEETTSSCCSEESSSEEEEEECTTTCHHHHHH
T ss_pred CCCHHHHHhhhcccCCCCcEEEeCCcchhhhcccccccCCCCCCCcccceeccccCCCccCCCceEEEeChHHCcccccC
Confidence 12356999999988877776654322 23334457799999999999999999999999999999999
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
+|++++++|+||||++|||||+|++|+||++|+|+|+||++++.. ++++.+..|++++.+|++||||
T Consensus 280 ~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~-------------~~~~~g~~~~~~~~~l~~GdV~ 346 (445)
T 2cav_A 280 DILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQQ-------------QQGLESMQLRRYAATLSEGDII 346 (445)
T ss_dssp TEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC------------------------CCEEEEEEECTTCEE
T ss_pred CCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcc-------------cccccCcceEEEEeEecCCcEE
Confidence 999999999999999999999999999999999999999998631 0112244567899999999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEEEeecCCCCccccccc-cchhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeEecCCh
Q 039441 437 IIPPGHPIALVASPNEKLLTVGFSLNARNNQRNFLAG-KINIMNQVERETMEVAFNVPARLIERVFGTNPKESYFVAGPE 515 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~F~~na~n~~~~fLAG-~~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv~~p~ 515 (539)
|||+||+|+++|+ +++.|++|.++++++.+++||| .++||++||++||++||+++.++|++|+.+++++ +|+++|+
T Consensus 347 vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~~p~~vla~af~v~~~~v~~l~~~~~e~-~~~~~~~ 423 (445)
T 2cav_A 347 VIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIRQIPRQVSDLTFPGSGEEVEELLENQKES-YFVDGQP 423 (445)
T ss_dssp EECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGGGSCHHHHHHHSSSCHHHHHHHHHHCCSC-SEEECC-
T ss_pred EEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhhhCCHHHHHHHHCcCHHHHHHHHhcCCcc-EEeCCch
Confidence 9999999999998 4699999999998999999999 8999999999999999999999999999999987 8999988
Q ss_pred hhhhhccccCCCCccccccc
Q 039441 516 EQQQRDEAGSGKSLPSILDI 535 (539)
Q Consensus 516 ~~~~~~~~~~~~~~~~~l~~ 535 (539)
++++++.++++++|+|||++
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~ 443 (445)
T 2cav_A 424 RHIDAGGKARRAHLPNLFRT 443 (445)
T ss_dssp --------------------
T ss_pred hhhhhhccCCCCcchHhhhh
Confidence 88677777788889999995
No 3
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=100.00 E-value=2.3e-72 Score=598.59 Aligned_cols=365 Identities=40% Similarity=0.728 Sum_probs=302.7
Q ss_pred cccCCCceee-cCccceeEecCCceEEEeeccCcccccccCcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEE
Q 039441 158 EEENNPYYFH-SQRFRYRVRSDSGHMRVLQRFSQKSHLLRGIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITL 236 (539)
Q Consensus 158 ~~~~~py~f~-~~~f~~~v~se~G~i~vl~~f~~~s~~l~gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~ 236 (539)
|+.+|||+|+ .++|.+++++++|.|++|..|+.++++|.+..++.++.++|+|+++++|||+++++|+||++|+|++++
T Consensus 5 ~~~~~p~~f~~~~~~~~~~~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~ 84 (416)
T 1uij_A 5 EDENNPFYFRSSNSFQTLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPHHADADFLLFVLSGRAILTL 84 (416)
T ss_dssp CTTSCTTEECGGGSEEEEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESCEEEEE
T ss_pred ccCCCCeEecccccccceEEcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccccCCCceEEEEEeeEEEEEE
Confidence 4568999999 999999999999999999999998899998888999999999999999999999999999999999999
Q ss_pred EeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCCCCce---e------------------------
Q 039441 237 VSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPGQFR---V------------------------ 289 (539)
Q Consensus 237 v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg~f~---~------------------------ 289 (539)
|++++.++++|++||||+||+|++||++|+|++++|++|+++++.++||+|. +
T Consensus 85 v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~~~~~~vLa~af~v 164 (416)
T 1uij_A 85 VNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQGFSHNILETSFHS 164 (416)
T ss_dssp ECSSCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGGGSCHHHHHHHHTS
T ss_pred EECCCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhhcCCHHHHHHHhCc
Confidence 9999999999999999999999999999996579999999999888776552 1
Q ss_pred ----------ccc-----cCccEEEcChhhhhhcCcccccc-CCCCCCCCcceecCCCCCcccCCCceEEEeCCcccccc
Q 039441 290 ----------QQR-----QQGTIKRASQEQLKALSHHASSR-RRHGRGSTAPFNLLSRKPIYNNNFGRFFEATPKDYQQL 353 (539)
Q Consensus 290 ----------~~q-----~~G~Ivrv~~eql~~l~~~~~~~-~~~~~~~~~~fnl~~~~p~~sn~~G~i~~~~~~~fP~L 353 (539)
+++ ++|.|++++++++..++.++++. +.+......+|||.+++|.|+|.+|+++++++.+||+|
T Consensus 165 ~~~~v~~l~~~~~~~~~~~~g~Iv~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~p~~~~~~G~~~~~~~~~~P~L 244 (416)
T 1uij_A 165 EFEEINRVLFGEEEEQRQQEGVIVELSKEQIRQLSRRAKSSSRKTISSEDEPFNLRSRNPIYSNNFGKFFEITPEKNPQL 244 (416)
T ss_dssp CHHHHHHHHTCTTCGGGSBSSSEEECCHHHHHHHTSSCBCCCGGGGGCSSSCEETTSSCCSEECSSEEEEEECTTTCHHH
T ss_pred CHHHHHhhhhccccccccCcceEEEeCCcccchhhhcccccCCCCCCCcccceeccccCCCccCCCceEEEEChHHCccc
Confidence 112 36999999988888776654322 23334567899999999999999999999999999999
Q ss_pred cccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCC
Q 039441 354 QEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPG 433 (539)
Q Consensus 354 ~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~G 433 (539)
++++|++++++|+||||++|||||+|++|+||++|+|+|+||+++++. +++ ++++....|++++.+|++|
T Consensus 245 ~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~------~~~----~~~~~~~~~~~~~~~l~~G 314 (416)
T 1uij_A 245 RDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKEQQ------QKQ----KQEEEPLEVQRYRAELSED 314 (416)
T ss_dssp HHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC----------------------CCEEEEEEEEETT
T ss_pred hhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCcc------ccc----cccccccceEEEEEEecCC
Confidence 999999999999999999999999999999999999999999998732 011 1223345678999999999
Q ss_pred cEEEeCCCCeEEEEcCCCCcEEEEEEeecCCCCccccccc-cchhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeEec
Q 039441 434 VVFIIPPGHPIALVASPNEKLLTVGFSLNARNNQRNFLAG-KINIMNQVERETMEVAFNVPARLIERVFGTNPKESYFVA 512 (539)
Q Consensus 434 DV~vVPaG~~h~i~n~gne~l~~v~F~~na~n~~~~fLAG-~~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv~ 512 (539)
||||||+|++||++|+ ++|.||+|+++++++.+++||| .++||++||++||++||+++.++|++|+.+++++ +|++
T Consensus 315 dv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~~~p~~vla~af~~~~~~v~~l~~~~~~~-~~~~ 391 (416)
T 1uij_A 315 DVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVRQIERQVQELAFPGSAQDVERLLKKQRES-YFVD 391 (416)
T ss_dssp CEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGGGSCHHHHHHHSSSCHHHHHHHTTSCCSC-SEEE
T ss_pred cEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHHhCCHHHHHHHHCcCHHHHHHHHhcCCcc-EEEC
Confidence 9999999999999998 5799999999998999999999 7999999999999999999999999999999887 8999
Q ss_pred CChhhhhhccccCCCCccccccc
Q 039441 513 GPEEQQQRDEAGSGKSLPSILDI 535 (539)
Q Consensus 513 ~p~~~~~~~~~~~~~~~~~~l~~ 535 (539)
+++++++++.++++++|+|||+|
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~ 414 (416)
T 1uij_A 392 AQPQQKEEGSKGRKGPFPSILGA 414 (416)
T ss_dssp C----------------------
T ss_pred CcccccccccccCCCchhhhhhh
Confidence 99887677777788889999995
No 4
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=100.00 E-value=2.9e-72 Score=600.50 Aligned_cols=365 Identities=40% Similarity=0.721 Sum_probs=308.3
Q ss_pred ccccCCCceeecCc-cceeEecCCceEEEeeccCcccccccCcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEE
Q 039441 157 EEEENNPYYFHSQR-FRYRVRSDSGHMRVLQRFSQKSHLLRGIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVIT 235 (539)
Q Consensus 157 ~~~~~~py~f~~~~-f~~~v~se~G~i~vl~~f~~~s~~l~gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~ 235 (539)
+++.+|||+|++++ |++++++++|.|++|..|+.+++.|.++.++.++.++|+|+++++|||++|++|+||++|+|+++
T Consensus 16 ~~~~~~p~~f~~~~~~~~~~~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~ 95 (434)
T 2ea7_A 16 SSGKNNPFYFNSDRWFRTLYRNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPHHADADFLLVVLNGTAVLT 95 (434)
T ss_dssp ECGGGCTTEECTTTSEEEEEEETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEE
T ss_pred cccCCCCeEEeccccccceEEcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCccCCCceEEEEEecEEEEE
Confidence 56678999999999 99999999999999999999999999988899999999999999999999999999999999999
Q ss_pred EEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCCCCce---e-----------------------
Q 039441 236 LVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPGQFR---V----------------------- 289 (539)
Q Consensus 236 ~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg~f~---~----------------------- 289 (539)
++++++.++++|++||||+||+|++||++|+|++++|++|++++++++||+|. +
T Consensus 96 ~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~~~~~~vLa~af~ 175 (434)
T 2ea7_A 96 LVNPDSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLRGFSKNILEASFD 175 (434)
T ss_dssp EECSSCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGGGSCHHHHHHHHT
T ss_pred EEeCCCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhhcCCHHHHHHHhC
Confidence 99999999999999999999999999999998678999999999888876542 1
Q ss_pred ---------c--c----------ccCccEEEcChhhhhhcCcccccc-CCCCCCCCcceecCCCCCcccCCCceEEEeCC
Q 039441 290 ---------Q--Q----------RQQGTIKRASQEQLKALSHHASSR-RRHGRGSTAPFNLLSRKPIYNNNFGRFFEATP 347 (539)
Q Consensus 290 ---------~--~----------q~~G~Ivrv~~eql~~l~~~~~~~-~~~~~~~~~~fnl~~~~p~~sn~~G~i~~~~~ 347 (539)
. + |++|.|++++.++++.+.+++++. +.+......+|||.+++|.|+|.+|+++++++
T Consensus 176 v~~~~v~~l~~~~~~~~~~~~~~q~~g~Iv~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~p~~~~~gG~v~~~~~ 255 (434)
T 2ea7_A 176 SDFKEINRVLFGEERQQQQGEESREEGVIVELKREQIQELMKHAKSSSRKELSSQDEPFNLRNSKPIYSNKFGRWYEMTP 255 (434)
T ss_dssp SCHHHHHHHHTCC---------CCCSSSEEECCHHHHHHHHTTSBCCCSSCTTCSSSCEETTSSCCSEEETTEEEEEECT
T ss_pred CCHHHHHhhhhcccccccccccccccceEEECCcccChhhcccccccCCCCCCCcccceeeccCCCceeCCCcEEEEECh
Confidence 1 1 136999999998887776654332 33444567899999999999999999999999
Q ss_pred cccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEE
Q 039441 348 KDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKIS 427 (539)
Q Consensus 348 ~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~ 427 (539)
.+||+|++++|++++++|+||||++|||||+|++|+||++|+|+|+||+++++..+ ++++....|++++
T Consensus 256 ~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~-----------~~~~~~~~~r~~~ 324 (434)
T 2ea7_A 256 EKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQ-----------KQQEESLEVQRYR 324 (434)
T ss_dssp TTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCC-----------TTSCCCEEEEEEE
T ss_pred hhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCccccc-----------cccccCcceEEEE
Confidence 99999999999999999999999999999999999999999999999999763200 0111233467899
Q ss_pred eeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecCCCCccccccc-cchhcccCcHHHHHHHcCCCHHHHHHhhcCCCC
Q 039441 428 ANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNARNNQRNFLAG-KINIMNQVERETMEVAFNVPARLIERVFGTNPK 506 (539)
Q Consensus 428 ~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na~n~~~~fLAG-~~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e 506 (539)
.+|++|||||||+|++||++|+ ++|.||+|+++++++.+++||| .++||++||++||++||+++.++|++|+.++++
T Consensus 325 ~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~~p~~vla~af~v~~~~v~~l~~~~~e 402 (434)
T 2ea7_A 325 AELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMSEIPTEVLEVSFPASGKKVEKLIKKQSE 402 (434)
T ss_dssp EEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGGGSCHHHHHHHSSSCHHHHHHHHTTCCS
T ss_pred EEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhhhCCHHHHHHHHCcCHHHHHHHHhcCCc
Confidence 9999999999999999999998 4799999999998999999999 799999999999999999999999999999988
Q ss_pred ceeEecCChhhhh--hccccCCCCccccccc
Q 039441 507 ESYFVAGPEEQQQ--RDEAGSGKSLPSILDI 535 (539)
Q Consensus 507 ~~~fv~~p~~~~~--~~~~~~~~~~~~~l~~ 535 (539)
+ +|++++.++++ ++.++++++|+|||++
T Consensus 403 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (434)
T 2ea7_A 403 S-HFVDAQPEQQQREEGHKGRKGSLSSILGS 432 (434)
T ss_dssp C-SEEECCCC---------------------
T ss_pred c-EEECCCchhhhhhhhccCCCCcchHhhhh
Confidence 7 89988665533 3334566779999995
No 5
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=100.00 E-value=2.1e-66 Score=549.01 Aligned_cols=340 Identities=34% Similarity=0.618 Sum_probs=280.3
Q ss_pred cccccCCCceeecCc-cceeEecCCceEEEeeccCcccccccCcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEE
Q 039441 156 EEEEENNPYYFHSQR-FRYRVRSDSGHMRVLQRFSQKSHLLRGIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVI 234 (539)
Q Consensus 156 e~~~~~~py~f~~~~-f~~~v~se~G~i~vl~~f~~~s~~l~gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i 234 (539)
|+++.+|||+|++++ |++++++++|+|++|+.|+.+++.|.++.+++++.++++|+|+++|||++|++|+||++|+|++
T Consensus 6 ~~~~~~~p~~f~~~~~~~~~~~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v 85 (397)
T 2phl_A 6 EEESQDNPFYFNSDNSWNTLFKNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQADAELLLVVRSGSAIL 85 (397)
T ss_dssp -----CCTTEECGGGTEEEEEEETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEESEEEEEEEEESEEEE
T ss_pred ccccCCCCcEeccchhccceEEcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEecCCCeEEEEEeeeEEE
Confidence 456678999999999 9999999999999999999999999998889999999999999999999999999999999999
Q ss_pred EEEeCCCceeeecCCCcE------EEeCCCCeEEEEecCCCceEEEEEEeccCCCC--CCcee-----------------
Q 039441 235 TLVSHERRESFNMEHGDV------ISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTP--GQFRV----------------- 289 (539)
Q Consensus 235 ~~v~pg~~~~~~v~~GDV------~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~p--g~f~~----------------- 289 (539)
|+|+++++.+++|++||| |+||+|++||++|+|++++|++|+++++.|+| ..|.+
T Consensus 86 ~~v~~~~~~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~~~~~~v 165 (397)
T 2phl_A 86 VLVKPDDRREYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQEFSKHI 165 (397)
T ss_dssp EEEETTTEEEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGGGSCHHH
T ss_pred EEEeCCCcEEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhhcCCHHH
Confidence 999999999999999999 99999999999999977999999999988765 22322
Q ss_pred -----------------cc--ccCccEEEcChhhhhhcCccccccCCCCCCCCcceecCCCCCcccCCCceEEEeCCccc
Q 039441 290 -----------------QQ--RQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPFNLLSRKPIYNNNFGRFFEATPKDY 350 (539)
Q Consensus 290 -----------------~~--q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fnl~~~~p~~sn~~G~i~~~~~~~f 350 (539)
++ |++|.|++++.++++.++.++++ ...+.|.++.|.|+|.+|+++++++.+
T Consensus 166 La~af~v~~~~v~~l~~~~~~q~~~~Iv~~~~~~~~~~~~~~~~--------~~~~~l~~~~p~~~n~~G~~~~v~~~~- 236 (397)
T 2phl_A 166 LEASFNSKFEEINRVLFEEEGQQEGVIVNIDSEQIKELSKHAKS--------SSRKSLSKQDNTIGNEFGNLTERTDNS- 236 (397)
T ss_dssp HHHHHTSCHHHHHHHHTCSTTCBSSSEEECCTTTHHHHHHHHHT--------C---------CEEEETTEEEEEEEETT-
T ss_pred HHHHhCCCHHHHHhhhhcccccccCceEEcCcccchhhhccCCC--------cccccccccCCcccCCCCeEEEEeecc-
Confidence 11 14799999998887766543221 123457788899999999999999877
Q ss_pred ccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeee
Q 039441 351 QQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANL 430 (539)
Q Consensus 351 P~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L 430 (539)
++|++++++|+||||++|||||+|++|+||++|+|+|+||+++++. .+..+++++.+|
T Consensus 237 -----l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~-----------------~~~g~~~~~~~l 294 (397)
T 2phl_A 237 -----LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNK-----------------ETLEYESYRAEL 294 (397)
T ss_dssp -----TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC-------------------CCSCEEEEEEEE
T ss_pred -----CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccc-----------------cCCCceEEEEEe
Confidence 7899999999999999999999999999999999999999995421 012247899999
Q ss_pred CCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecCCCCccccccc-cchhcccCc-----HHHHHHHcCCCHHHHHHhhcCC
Q 039441 431 SPGVVFIIPPGHPIALVASPNEKLLTVGFSLNARNNQRNFLAG-KINIMNQVE-----RETMEVAFNVPARLIERVFGTN 504 (539)
Q Consensus 431 ~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na~n~~~~fLAG-~~svL~~~p-----~evLa~AF~vs~e~v~kL~~~q 504 (539)
++|||||||+|++|+++|++ +|.||+|.++++++..++||| .++||+++| ++||++||+++.++|++|+.++
T Consensus 295 ~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~~~p~~~~~~eVla~af~v~~~~v~~l~~~~ 372 (397)
T 2phl_A 295 SKDDVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVISSIGRALDGKDVLGLTFSGSGDEVMKLINKQ 372 (397)
T ss_dssp ETTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHHHHHTSTTHHHHHHHHSSSCHHHHHHHHTTC
T ss_pred cCCCEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHhhCCCccchHHHHHHHhCcCHHHHHHHHhcC
Confidence 99999999999999999995 799999999998999999999 799999999 9999999999999999999999
Q ss_pred CCceeEecCChhhhhhccccCCCCcc
Q 039441 505 PKESYFVAGPEEQQQRDEAGSGKSLP 530 (539)
Q Consensus 505 ~e~~~fv~~p~~~~~~~~~~~~~~~~ 530 (539)
+++ +|+++++++ +++.++++++|.
T Consensus 373 ~e~-~i~~~~~~~-~~~~~~~~~~~~ 396 (397)
T 2phl_A 373 SGS-YFVDAHHHQ-QEQQKGRKGAFV 396 (397)
T ss_dssp CCC-SEEECC----------------
T ss_pred Ccc-EEeCCCccc-chhccccCCCCC
Confidence 887 999998776 446677777653
No 6
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=100.00 E-value=4.7e-66 Score=554.00 Aligned_cols=312 Identities=20% Similarity=0.323 Sum_probs=271.8
Q ss_pred ceeEecCCceEEEeeccCcccccccCcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceee------
Q 039441 172 RYRVRSDSGHMRVLQRFSQKSHLLRGIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESF------ 245 (539)
Q Consensus 172 ~~~v~se~G~i~vl~~f~~~s~~l~gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~------ 245 (539)
.++|+||+|.|++ |+.++++|+++ +|+++.++++|+||++|||++|++|+||++|+|++|+|.|+|+++|
T Consensus 18 ~~~~~se~G~~e~---w~~~~~~L~~~-gvs~~r~~i~p~Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~ 93 (466)
T 3kgl_A 18 SHVLKAEAGRIEV---WDHHAPQLRCS-GVSFVRYIIESKGLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVF 93 (466)
T ss_dssp SEEEEETTEEEEE---CCTTSHHHHHH-TEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEECCSS
T ss_pred cceeeCCCcEEEE---ECCCChhhccC-CeEEEEEEECCCCEeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhhccccc
Confidence 3789999999997 99999999954 5556666669999999999999999999999999999999999875
Q ss_pred ------------------------------------------------------ecCCCcEEEeCCCCeEEEEecCCCce
Q 039441 246 ------------------------------------------------------NMEHGDVISVPAGTTYYLSNQDNVDR 271 (539)
Q Consensus 246 ------------------------------------------------------~v~~GDV~~iPaG~~h~i~N~g~~e~ 271 (539)
+|++||||+||||++|||+|+| +++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g-~e~ 172 (466)
T 3kgl_A 94 QPGGGSPFGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDG-NQP 172 (466)
T ss_dssp CCCC-----------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCS-SSC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCC-CCc
Confidence 8999999999999999999999 799
Q ss_pred EEEEEEeccCCCCCC-------cee----------------------------------------------ccc-cCccE
Q 039441 272 LHVAKLLQPVNTPGQ-------FRV----------------------------------------------QQR-QQGTI 297 (539)
Q Consensus 272 L~iv~l~d~~n~pg~-------f~~----------------------------------------------~~q-~~G~I 297 (539)
|+||+++|++|.+++ |.+ +++ .+|.|
T Consensus 173 L~~l~~~d~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~sGF~~e~La~Af~v~~e~~~kL~~~q~~~G~I 252 (466)
T 3kgl_A 173 LVIVSVLDLASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILNGFTPEVLAKAFKIDVRTAQQLQNQQDNRGNI 252 (466)
T ss_dssp EEEEEEEESSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGGGSCHHHHHHHHTSCHHHHHHHTCTTCCSCSE
T ss_pred EEEEEEEcCCCcccccCCceeeeEecCCCccccccccccccccCCCccccCCHHHHHHHhCCCHHHHHHHhccccCceeE
Confidence 999999999886543 221 223 37999
Q ss_pred EEcChhhhhhcCccccccCC--CCCC-------CCcceecC--CCCCcccCCCceEEEeCCcccccccccceeEEEEEEc
Q 039441 298 KRASQEQLKALSHHASSRRR--HGRG-------STAPFNLL--SRKPIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEIN 366 (539)
Q Consensus 298 vrv~~eql~~l~~~~~~~~~--~~~~-------~~~~fnl~--~~~p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~ 366 (539)
|+++ ++|++++|...+.+. ..++ ....|||. +++|+|+|.+|+++.+++.+||+|++++|++++++|+
T Consensus 253 v~v~-~~l~~~~p~~~~~~~~~~~~glee~~c~~r~~~Ni~~p~~~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~ 331 (466)
T 3kgl_A 253 IRVQ-GPFSVIRPPLRSQRPQEEVNGLEETICSARCTDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIR 331 (466)
T ss_dssp EECC-SCCCCCCCCC--------------CCSSCCCEEETTCGGGEEEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEE
T ss_pred EEec-CcccccCCcccccccccccCCccccccceeccccccCcccCCcccCCCceEEEechhhCcccccCceeeEEEEee
Confidence 9998 679999887542210 0111 23467886 6889999999999999999999999999999999999
Q ss_pred CCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEE
Q 039441 367 QGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIAL 446 (539)
Q Consensus 367 pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i 446 (539)
||||++|||||+|++|+||++|+++|+||++++. ++++.+|++|||||||+|++|++
T Consensus 332 pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~-----------------------~~f~~~l~~GDV~v~P~G~~H~~ 388 (466)
T 3kgl_A 332 QNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGD-----------------------RVFDGQVSQGQLLSIPQGFSVVK 388 (466)
T ss_dssp TTEEEEEEEESSCCEEEEEEESEEEEEEECTTSC-----------------------EEEEEEEETTCEEEECTTCEEEE
T ss_pred cCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCc-----------------------EEEEeEecCCcEEEECCCCeEEE
Confidence 9999999999999999999999999999999863 57999999999999999999999
Q ss_pred EcCCCCcEEEEEEeecCCCCccccccccchhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeEecCCh
Q 039441 447 VASPNEKLLTVGFSLNARNNQRNFLAGKINIMNQVERETMEVAFNVPARLIERVFGTNPKESYFVAGPE 515 (539)
Q Consensus 447 ~n~gne~l~~v~F~~na~n~~~~fLAG~~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv~~p~ 515 (539)
. .++++++||+|++++ ++...+|||+++||++||++||++||+++.++|++|+.++++. +|++++.
T Consensus 389 ~-ag~e~~~~l~~f~s~-np~~~~LaG~~s~~~~lP~eVla~aF~v~~~~v~~Lk~~q~e~-~i~~~~~ 454 (466)
T 3kgl_A 389 R-ATSEQFRWIEFKTNA-NAQINTLAGRTSVLRGLPLEVISNGYQISLEEARRVKFNTIET-TLTHSSG 454 (466)
T ss_dssp E-ECSSEEEEEEEESSS-SCCEEESSSTTCTGGGSCHHHHHHHHTCCHHHHHHHHHSCCCS-SEEECC-
T ss_pred E-cCCCCEEEEEEECCC-CCccccccchhhhhhhCCHHHHHHHhCcCHHHHHHHHhccCcc-EEECCCc
Confidence 4 568899999999887 8899999999999999999999999999999999999999987 8887764
No 7
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=100.00 E-value=7.7e-66 Score=552.26 Aligned_cols=312 Identities=20% Similarity=0.361 Sum_probs=266.4
Q ss_pred ceeEecCCceEEEeeccCccccccc--CcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceee----
Q 039441 172 RYRVRSDSGHMRVLQRFSQKSHLLR--GIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESF---- 245 (539)
Q Consensus 172 ~~~v~se~G~i~vl~~f~~~s~~l~--gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~---- 245 (539)
.++|+||+|.|++ ||+++++|+ ||+.+|++| +|+||++|||++|++|+||++|+|++|+|.|+|+++|
T Consensus 25 ~~~i~se~G~~e~---~d~~~~~l~~~gvs~~R~~i---~P~gl~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~ 98 (465)
T 3qac_A 25 TNRIQAERGLTEV---WDSNEQEFRCAGVSVIRRTI---EPHGLLLPSFTSAPELIYIEQGNGITGMMIPGCPETYESGS 98 (465)
T ss_dssp CEEEEETTEEEEE---CCTTSHHHHHHTCEEEEEEE---CTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCC----
T ss_pred ccceeCCCcEEEE---ECCCChhhcccceEEEEEEE---cCCcCcccEEcCCCEEEEEEECcEEEEEecCCCCceeecch
Confidence 4689999999996 999998888 999999999 9999999999999999999999999999999998766
Q ss_pred ----------------------------------ecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCCCCc----
Q 039441 246 ----------------------------------NMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPGQF---- 287 (539)
Q Consensus 246 ----------------------------------~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg~f---- 287 (539)
+|++||||+||||++||+||+| +++|++|+++|+.|.++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G-~~~lv~v~~~d~~n~~nqld~~~ 177 (465)
T 3qac_A 99 QQFQGGEDERIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNG-DQPLVAVILIDTANHANQLDKNF 177 (465)
T ss_dssp --------------------------CCCCCCEEEEETTEEEEECTTCEEEEECCS-SSCEEEEEEECTTSTTCCSCSSS
T ss_pred hccccccccccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCC-CCCEEEEEEEcCCCccccccccc
Confidence 8999999999999999999999 6999999999998765432
Q ss_pred ----ee----------------------------------------------------ccc-cCccEEEcChhhhhhcCc
Q 039441 288 ----RV----------------------------------------------------QQR-QQGTIKRASQEQLKALSH 310 (539)
Q Consensus 288 ----~~----------------------------------------------------~~q-~~G~Ivrv~~eql~~l~~ 310 (539)
.| +++ .+|.||+|+ ++|++++|
T Consensus 178 ~r~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~ni~sgF~~e~La~Af~v~~~~~~kl~~~q~~rG~Ivrv~-~~l~~~~p 256 (465)
T 3qac_A 178 PTRFYLAGKPQQEHSGEHQFSRESRRGERNTGNIFRGFETRLLAESFGVSEEIAQKLQAEQDDRGNIVRVQ-EGLHVIKP 256 (465)
T ss_dssp CCEEESSSCCCCSCC--------------CCCCGGGGSCHHHHHHHHTCCHHHHHHHHTTTCCSCSEEEC--CCCC----
T ss_pred ceeEEecCCCccccccccccccccccccccccchhhcCCHHHHHHHhCCCHHHHHHhhhccccceeEEEec-CcccccCC
Confidence 22 112 479999995 66999987
Q ss_pred ccccc---------C-CCCCCC-------CcceecC--CCCCcccCCCceEEEeCCcccccccccceeEEEEEEcCCcee
Q 039441 311 HASSR---------R-RHGRGS-------TAPFNLL--SRKPIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMM 371 (539)
Q Consensus 311 ~~~~~---------~-~~~~~~-------~~~fnl~--~~~p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~ 371 (539)
+..+. + +..++. ...+||. +++|+|++.+|+++++++.+||+|++++|++++++|+||||+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~nglee~~c~~~l~~ni~~p~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~ 336 (465)
T 3qac_A 257 PSRAWEEREQGSRGSRYLPNGVEETICSARLAVNVDDPSKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMM 336 (465)
T ss_dssp ------------------------CTTTSCCEEETTCTTTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEE
T ss_pred cccchhhhhcccccccccCCCccccccceeccccccccccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEe
Confidence 75421 0 011222 2235553 788999999999999999999999999999999999999999
Q ss_pred cceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCC
Q 039441 372 VPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPN 451 (539)
Q Consensus 372 ~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gn 451 (539)
+|||||+|++|+||++|+|+|+||++++. ++++.+|++|||||||+||+|++.+. +
T Consensus 337 ~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~-----------------------~~f~~~l~~GDVfvvP~g~~h~~~ag-~ 392 (465)
T 3qac_A 337 APHYNLNAHNIMYCVRGRGRIQIVNDQGQ-----------------------SVFDEELSRGQLVVVPQNFAIVKQAF-E 392 (465)
T ss_dssp EEEEESSCCEEEEEEEEEEEEEEECTTSC-----------------------EEEEEEEETTCEEEECTTCEEEEEEE-E
T ss_pred eeEECCCCCEEEEEEeCCEEEEEEeCCCc-----------------------EEEEEEecCCeEEEECCCcEEEEEcC-C
Confidence 99999999999999999999999999863 58999999999999999999999864 7
Q ss_pred CcEEEEEEeecCCCCccccccccchhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeEecCChhh
Q 039441 452 EKLLTVGFSLNARNNQRNFLAGKINIMNQVERETMEVAFNVPARLIERVFGTNPKESYFVAGPEEQ 517 (539)
Q Consensus 452 e~l~~v~F~~na~n~~~~fLAG~~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv~~p~~~ 517 (539)
++++||+|++++ ++...+|||+++||++||++||++||+++.++|++|+.+++++ +|++++.++
T Consensus 393 e~~~~l~f~~s~-np~~~~LaG~~sv~~~ip~eVla~aF~v~~e~v~~Lk~~~~e~-~i~~~~~~~ 456 (465)
T 3qac_A 393 DGFEWVSFKTSE-NAMFQSLAGRTSAIRSLPIDVVSNIYQISREEAFGLKFNRPET-TLFRSSGQG 456 (465)
T ss_dssp EEEEEEEEESST-TCCEEESSSSSBHHHHSCHHHHHHHHTCCHHHHHHHHHSCCSC-SEECCCC--
T ss_pred CCeEEEEEecCC-CCcccccccchhhhhhCCHHHHHHHhCCCHHHHHHHHhccCcc-EEECCcccc
Confidence 899999999887 8899999999999999999999999999999999999999987 888776554
No 8
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=100.00 E-value=1.3e-63 Score=538.60 Aligned_cols=312 Identities=22% Similarity=0.388 Sum_probs=270.7
Q ss_pred ceeEecCCceEEEeeccCccccccc--CcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceee----
Q 039441 172 RYRVRSDSGHMRVLQRFSQKSHLLR--GIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESF---- 245 (539)
Q Consensus 172 ~~~v~se~G~i~vl~~f~~~s~~l~--gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~---- 245 (539)
.++|+||||.|++ |+.+++.|. ||+.+|++| +|+||++|||++|++|+||++|+|++|+|.|+|+++|
T Consensus 21 ~~~~~se~G~~e~---~~~~~~~L~~~gvs~~R~~i---~pggl~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~ 94 (496)
T 3ksc_A 21 DNRIESEGGLIET---WNPNNKQFRCAGVALSRATL---QRNALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQ 94 (496)
T ss_dssp SEEEEETTEEEEE---CCTTSHHHHHHTCEEEEEEE---CTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC-----
T ss_pred ccccCCCCcEEEe---ccccchhhccCCceEEEEEe---cCCCEeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhh
Confidence 4799999999997 999999998 999999999 9999999999999999999999999999999988765
Q ss_pred ------------------ecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCCC-------Ccee-----------
Q 039441 246 ------------------NMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPG-------QFRV----------- 289 (539)
Q Consensus 246 ------------------~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg-------~f~~----------- 289 (539)
+|++||||+||||++||++|+| +++|++|++||++|..+ .|.|
T Consensus 95 ~~~~~~~~~~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G-~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~ 173 (496)
T 3ksc_A 95 ESEQGEGRRYRDRHQKVNRFREGDIIAVPTGIVFWMYNDQ-DTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQY 173 (496)
T ss_dssp ----------CCCCCCEEEECTTEEEEECTTCEEEEEECS-SSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGG
T ss_pred hcccccccccccchheeeccCCCCEEEECCCCcEEEEcCC-CCCEEEEEEeccCcccccCCCceeeeEecCCCccccccc
Confidence 8999999999999999999998 69999999999876411 1211
Q ss_pred ----------------------------------------c---c-ccCccEEEcChhhhhhcCcccccc----------
Q 039441 290 ----------------------------------------Q---Q-RQQGTIKRASQEQLKALSHHASSR---------- 315 (539)
Q Consensus 290 ----------------------------------------~---~-q~~G~Ivrv~~eql~~l~~~~~~~---------- 315 (539)
- + +++|.||+|++ +|++|+|.....
T Consensus 174 ~~~~~~~~~~~~~~~ni~sgF~~e~La~Af~v~~e~~~kl~~~~~~~~rg~IV~v~~-~l~~~~P~~~~~~~~~~~~~~~ 252 (496)
T 3ksc_A 174 QHQQGGKQEQENEGNNIFSGFKRDFLEDAFNVNRHIVDRLQGRNEDEEKGAIVKVKG-GLSIISPPEKQARHQRGSRQEE 252 (496)
T ss_dssp CC-----------CCSGGGGSCHHHHHHHHTCCHHHHHHHTTTTCCTTTCSEEECSS-CCCCCCCC--------------
T ss_pred cccccccccccccCCCchhhcCHHHHHHHHCCCHHHHHHHHhhcccccCccEEEecC-cccccCCchhhhchhhcccchh
Confidence 1 1 25799999986 698887654210
Q ss_pred -----------------------------CC------------------C-------CCCC-------CcceecC--CCC
Q 039441 316 -----------------------------RR------------------H-------GRGS-------TAPFNLL--SRK 332 (539)
Q Consensus 316 -----------------------------~~------------------~-------~~~~-------~~~fnl~--~~~ 332 (539)
|. . .++. ...+||. +.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nGlee~~c~~~l~~Ni~~p~~~ 332 (496)
T 3ksc_A 253 DEDEEKQPRHQRGSRQEEEEDEDEERQPRHQRRRGEEEEEDKKERGGSQKGKSRRQGDNGLEETVCTAKLRLNIGPSSSP 332 (496)
T ss_dssp ---------------------------------------------------------------CCSSSCCEEECSTTSCC
T ss_pred hhhccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCccccccchhhhccccccccC
Confidence 00 0 0111 1356776 778
Q ss_pred CcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhH
Q 039441 333 PIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQE 412 (539)
Q Consensus 333 p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~ 412 (539)
|+|+|.+|+++.+++.+||+|++++|++++++|+||||++|||||+|++|+||++|+++|+||++++.
T Consensus 333 di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~------------ 400 (496)
T 3ksc_A 333 DIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGN------------ 400 (496)
T ss_dssp SEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSC------------
T ss_pred CcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCc------------
Confidence 99999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred HHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecCCCCccccccccchhcccCcHHHHHHHcCC
Q 039441 413 EEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNARNNQRNFLAGKINIMNQVERETMEVAFNV 492 (539)
Q Consensus 413 ~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na~n~~~~fLAG~~svL~~~p~evLa~AF~v 492 (539)
++++.+|++|||||||+|++|++.|. +++++||+|++++ ++..++|||.++||++||++||++||+|
T Consensus 401 -----------~~f~~~l~~GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~-np~~~~LaG~~sv~~~~p~eVLa~aF~v 467 (496)
T 3ksc_A 401 -----------TVFDGELEAGRALTVPQNYAVAAKSL-SDRFSYVAFKTND-RAGIARLAGTSSVINNLPLDVVAATFNL 467 (496)
T ss_dssp -----------EEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESST-TCCEEESSSTTCTTTTSCHHHHHHHHTC
T ss_pred -----------EEEEEEecCCeEEEECCCCEEEEEeC-CCCEEEEEEECCC-CCccccccchhhhhhhCCHHHHHHHHCc
Confidence 58889999999999999999999887 7889999999887 8899999999999999999999999999
Q ss_pred CHHHHHHhhcCCCCceeEecCChhh
Q 039441 493 PARLIERVFGTNPKESYFVAGPEEQ 517 (539)
Q Consensus 493 s~e~v~kL~~~q~e~~~fv~~p~~~ 517 (539)
+.++|++|+.++++. +|+|++.++
T Consensus 468 ~~~~v~~Lk~~q~e~-~i~~~~~~~ 491 (496)
T 3ksc_A 468 QRNEARQLKSNNPFK-FLVPARESE 491 (496)
T ss_dssp CHHHHHHHHHSCCCS-SEECCCC--
T ss_pred CHHHHHHHHhcCCcc-EEeCCCCcc
Confidence 999999999999987 999988765
No 9
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=100.00 E-value=7.1e-63 Score=530.53 Aligned_cols=311 Identities=18% Similarity=0.327 Sum_probs=267.5
Q ss_pred eeEecCCceEEEeeccCccccccc--CcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCcee------
Q 039441 173 YRVRSDSGHMRVLQRFSQKSHLLR--GIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRES------ 244 (539)
Q Consensus 173 ~~v~se~G~i~vl~~f~~~s~~l~--gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~------ 244 (539)
++|+||+|.|++ |+.++++|+ ||+.+|++| +|+||++|||++|++|+||++|+|++|+|+|+|+++
T Consensus 39 ~~v~se~G~~~~---~~~~~~~l~~~gvs~~r~~i---~pggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~ 112 (459)
T 2e9q_A 39 RRAEAEAGFTEV---WDQDNDEFQCAGVNMIRHTI---RPKGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLR 112 (459)
T ss_dssp EEEEETTEEEEE---CCTTSHHHHHHTEEEEEEEE---CTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC
T ss_pred ceEecCCcEEEe---cCCCChhhccCceEEEEEEE---cCCCEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchh
Confidence 689999999997 999999998 898888877 999999999999999999999999999999999754
Q ss_pred ----------------eecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCCC-------Ccee------------
Q 039441 245 ----------------FNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPG-------QFRV------------ 289 (539)
Q Consensus 245 ----------------~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg-------~f~~------------ 289 (539)
++|++||||+||||++||++|+| +++|++|+++|+.|.++ +|.+
T Consensus 113 ~~~~~~~~~~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g-~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~ 191 (459)
T 2e9q_A 113 RSQSAGSAFKDQHQKIRPFREGDLLVVPAGVSHWMYNRG-QSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVE 191 (459)
T ss_dssp -------CCCEEECCCEEEETTEEEEECTTCCEEEEECS-SSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTC
T ss_pred hccccccccccccceeEEecCCCEEEECCCCCEEEEeCC-CCCEEEEEEecCCCcccccCcccceeeccCCccccchhhh
Confidence 48999999999999999999998 68999999999877322 1211
Q ss_pred ------------------------------------------ccc-cCccEEEcChhhhhhcCcccccc-----------
Q 039441 290 ------------------------------------------QQR-QQGTIKRASQEQLKALSHHASSR----------- 315 (539)
Q Consensus 290 ------------------------------------------~~q-~~G~Ivrv~~eql~~l~~~~~~~----------- 315 (539)
+++ .+|.||+++++ |+.+.|.....
T Consensus 192 ~~~~~~~~~~~~~~~~nif~gf~~evLa~aF~v~~~~v~kL~~~~~~~G~Iv~~~~~-l~~~~P~~~~~e~~~~~~~~~~ 270 (459)
T 2e9q_A 192 EWERSSRKGSSGEKSGNIFSGFADEFLEEAFQIDGGLVRKLKGEDDERDRIVQVDED-FEVLLPEKDEEERSRGRYIESE 270 (459)
T ss_dssp C------------CCCCTTTTSCHHHHHHHHTCCHHHHHHHHTTTCCSTTEEECCSS-CCTTTTC---------------
T ss_pred ccccccccccccccccchhhcCCHHHHHhhcCCCHHHHHhhhhcccCCccEEEeCCc-ccccCCccchhhhccccccccc
Confidence 122 47899999854 77776642110
Q ss_pred ---CCCCCCCCcce----ecC--CCCCcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEE
Q 039441 316 ---RRHGRGSTAPF----NLL--SRKPIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVV 386 (539)
Q Consensus 316 ---~~~~~~~~~~f----nl~--~~~p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~ 386 (539)
+.+......+| |+. ++.|+|++.+|+++++++.+||+|++++|++++++|.||||++|||||+|++|+||+
T Consensus 271 ~~~~~g~~e~~~~~~l~~n~~~~~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~ 350 (459)
T 2e9q_A 271 SESENGLEETICTLRLKQNIGRSERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYAT 350 (459)
T ss_dssp ---------CGGGSCCEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEE
T ss_pred ccccCCccccccceeeeecccccccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEE
Confidence 01111122344 444 788999999999999999999999999999999999999999999999999999999
Q ss_pred eceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecCCCC
Q 039441 387 EGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNARNN 466 (539)
Q Consensus 387 ~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na~n~ 466 (539)
+|+|+|+||++++. ++++.+|++|||||||+|++|+++| ++++++||+|++++ ++
T Consensus 351 ~G~~~v~vv~~~g~-----------------------~~~~~~l~~GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~-~~ 405 (459)
T 2e9q_A 351 RGNARVQVVDNFGQ-----------------------SVFDGEVREGQVLMIPQNFVVIKRA-SDRGFEWIAFKTND-NA 405 (459)
T ss_dssp EEEEEEEEECTTSC-----------------------EEEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEEEESSS-SC
T ss_pred eeEEEEEEEeCCCC-----------------------EEEeeEEeCCcEEEECCCCEEEEEe-CCCCeEEEEEecCC-CC
Confidence 99999999999863 5888899999999999999999999 57889999999888 88
Q ss_pred ccccccccchhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeEecCChhh
Q 039441 467 QRNFLAGKINIMNQVERETMEVAFNVPARLIERVFGTNPKESYFVAGPEEQ 517 (539)
Q Consensus 467 ~~~fLAG~~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv~~p~~~ 517 (539)
...+|||+++||+++|++||++||+++.+++++|+.++++. +|++++.++
T Consensus 406 ~~~~laG~~s~~~~~p~~Vla~af~v~~~~v~~l~~~~~e~-~i~~~~~~~ 455 (459)
T 2e9q_A 406 ITNLLAGRVSQMRMLPLGVLSNMYRISREEAQRLKYGQQEM-RVLSPGRSQ 455 (459)
T ss_dssp CEEESSSSSSHHHHSCHHHHHHHHTCCHHHHHHHHHSCCSC-SEECSCC--
T ss_pred cceeecchhHHHHhCCHHHHHHHHCcCHHHHHHHHhcCCcc-EEeCCCccc
Confidence 99999999999999999999999999999999999999887 899887544
No 10
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=100.00 E-value=4.9e-62 Score=526.39 Aligned_cols=311 Identities=19% Similarity=0.349 Sum_probs=268.3
Q ss_pred ceeEecCCceEEEeeccCccccccc--CcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce------
Q 039441 172 RYRVRSDSGHMRVLQRFSQKSHLLR--GIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE------ 243 (539)
Q Consensus 172 ~~~v~se~G~i~vl~~f~~~s~~l~--gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~------ 243 (539)
..+|+||||.|++ ||++.+.|. ||+..|+.| .|+||++|||++|++|+||++|++++|+|.|||++
T Consensus 23 ~~~i~se~G~~e~---w~~~~p~l~~~Gvs~~R~~i---~p~Gl~lPh~~~a~el~yV~qG~g~~G~v~Pgcpet~~~~~ 96 (531)
T 3fz3_A 23 DNRIQAEAGQIET---WNFNQGDFQCAGVAASRITI---QRNGLHLPSYSNAPQLIYIVQGRGVLGAVFSGCPETFEESQ 96 (531)
T ss_dssp CEEEEETTEEEEE---CCTTSHHHHHHTEEEEEEEE---CTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEECCC
T ss_pred chhcccCCceEEE---eCCCChhhccCcceEEEEEe---cCCCEeCCccCCCCeEEEEEECcEEEEEEcCCCcccccccc
Confidence 3689999999996 999999999 999999999 99999999999999999999999999999999986
Q ss_pred ----------------------------------------------------------------------------eeec
Q 039441 244 ----------------------------------------------------------------------------SFNM 247 (539)
Q Consensus 244 ----------------------------------------------------------------------------~~~v 247 (539)
+++|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~v 176 (531)
T 3fz3_A 97 QSSQQGRQQEQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRI 176 (531)
T ss_dssp C-------------------------------------------------------------------CCSCEESCCEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecc
Confidence 3468
Q ss_pred CCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCCC-------Ccee-------------------------------
Q 039441 248 EHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPG-------QFRV------------------------------- 289 (539)
Q Consensus 248 ~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg-------~f~~------------------------------- 289 (539)
++||||+||||++|||||+| +++|+||+++|++|..+ .|+|
T Consensus 177 r~GDviaiPaG~~~w~yN~G-~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (531)
T 3fz3_A 177 REGDVVAIPAGVAYWSYNDG-DQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQP 255 (531)
T ss_dssp ETTEEEEECTTCCEEEECCS-SSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC---------------------
T ss_pred cCCcEEEECCCCeEEEEeCC-CceEEEEEEEccccccccCCCccceeEEcCCCccccccccccccccccccccccccccc
Confidence 99999999999999999998 58999999999876421 1111
Q ss_pred ----------------------------------------ccc-cCccEEEcChhhhhhcCccccc-----------cCC
Q 039441 290 ----------------------------------------QQR-QQGTIKRASQEQLKALSHHASS-----------RRR 317 (539)
Q Consensus 290 ----------------------------------------~~q-~~G~Ivrv~~eql~~l~~~~~~-----------~~~ 317 (539)
+++ .+|.||||+ ++|++|+|.... .+.
T Consensus 256 ~~~~~~~~~~~~~~nifsGFs~e~La~A~~v~~~~a~kLq~~~~~rg~IVrv~-~~l~~~~P~~~~~~~~~~~~~~~~~~ 334 (531)
T 3fz3_A 256 FGRPRQQEQQGNGNNVFSGFNTQLLAQALNVNEETARNLQGQNDNRNQIIQVR-GNLDFVQPPRGRQEREHEERQQEQLQ 334 (531)
T ss_dssp -----------CCSSGGGGSCHHHHHHHHTSCHHHHHHHHTSSCCSCSEEECS-SSCCCSCCC-----------------
T ss_pred ccccchhhhcccCCCeeecCCHHHHHHHHCCCHHHHHHHhcccccCceEEEec-CCCcccCCchhhhhhhhccccccccc
Confidence 122 479999997 569999876421 000
Q ss_pred ------C----CCC-------CCcceecC--CCCCcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCC
Q 039441 318 ------H----GRG-------STAPFNLL--SRKPIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSK 378 (539)
Q Consensus 318 ------~----~~~-------~~~~fnl~--~~~p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpn 378 (539)
. .++ .+.+|||. +++|++++.+|+++++++.+||+|++++|++++++|.||||++|||||+
T Consensus 335 ~~~~~~~~~~~~nGleet~c~~rl~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~ 414 (531)
T 3fz3_A 335 QERQQQGEQLMANGLEETFCSLRLKENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVN 414 (531)
T ss_dssp -------------CGGGTGGGCCCEEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESS
T ss_pred ccccccccccCCCCcccccccceeeeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCC
Confidence 0 122 23468887 7889999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEE
Q 039441 379 ATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVG 458 (539)
Q Consensus 379 A~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~ 458 (539)
|++|+||++|+++|+||++++. ++++.+|++|||||||+|++|++.+. +++++|++
T Consensus 415 A~Ei~yVl~G~~rv~~V~~~G~-----------------------~v~~~~L~~GDV~v~P~G~~H~~~ag-~e~l~fla 470 (531)
T 3fz3_A 415 AHSVVYVIRGNARVQVVNENGD-----------------------AILDQEVQQGQLFIVPQNHGVIQQAG-NQGFEYFA 470 (531)
T ss_dssp CCEEEEEEEEEEEEEEECTTSC-----------------------EEEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEE
T ss_pred CCEEEEEEeCcEEEEEEeCCCc-----------------------EEEEEEecCCeEEEECCCCeEEEecC-CCCEEEEE
Confidence 9999999999999999999863 57899999999999999999998865 78899999
Q ss_pred EeecCCCCccccccccchhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeEecCChh
Q 039441 459 FSLNARNNQRNFLAGKINIMNQVERETMEVAFNVPARLIERVFGTNPKESYFVAGPEE 516 (539)
Q Consensus 459 F~~na~n~~~~fLAG~~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv~~p~~ 516 (539)
|.++. ++..++|||+++||++||++||++||+|+.++|++|+.+++++ +||.+|..
T Consensus 471 F~ss~-np~~~~LaG~~svf~~lP~eVLa~aF~v~~e~v~kLk~~~~es-~i~~pp~~ 526 (531)
T 3fz3_A 471 FKTEE-NAFINTLAGRTSFLRALPDEVLANAYQISREQARQLKYNRQET-IALSSSQQ 526 (531)
T ss_dssp EESST-TCCEEESSSTTCHHHHSCHHHHHHHHTCCHHHHHHHHHSCCCS-SEECC---
T ss_pred EecCC-CCcceeccchhHHHHhCCHHHHHHHhCcCHHHHHHHHhcCCCc-eEECCCCC
Confidence 98775 8888999999999999999999999999999999999999987 77777654
No 11
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=100.00 E-value=1.5e-59 Score=506.97 Aligned_cols=311 Identities=21% Similarity=0.403 Sum_probs=266.3
Q ss_pred eeEecCCceEEEeeccCccccccc--CcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce-------
Q 039441 173 YRVRSDSGHMRVLQRFSQKSHLLR--GIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE------- 243 (539)
Q Consensus 173 ~~v~se~G~i~vl~~f~~~s~~l~--gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~------- 243 (539)
++|+||+|.|++ |+.+++.|+ ||+.+|++| +|+||++|||++|++|+||++|+|++|+|+|+|++
T Consensus 24 ~~v~se~G~~e~---~~~~~~~l~~~gvs~~r~~l---~Pggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~ 97 (476)
T 1fxz_A 24 NRIESEGGLIET---WNPNNKPFQCAGVALSRCTL---NRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQ 97 (476)
T ss_dssp CEEEETTEEEEE---CCTTSHHHHHHTCEEEEEEE---CTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC------
T ss_pred eEEecCCceEEe---eCCCChhhccCceEEEEEEE---cCCCEecceecCCceEEEEEecEEEEEEEcCCCcchhhcccc
Confidence 689999999997 999999998 899888877 99999999999999999999999999999999974
Q ss_pred ----------------eeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCCC-------Ccee-----------
Q 039441 244 ----------------SFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPG-------QFRV----------- 289 (539)
Q Consensus 244 ----------------~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg-------~f~~----------- 289 (539)
+++|++||||+||||++||++|+| +++|++|+++|+.|..+ .|.+
T Consensus 98 ~~~~~~~~~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G-~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~ 176 (476)
T 1fxz_A 98 PQQRGQSSRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNE-DTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKY 176 (476)
T ss_dssp ------------CCCCEEEECTTEEEEECTTCEEEEEECS-SSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHH
T ss_pred ccccccccccccccceEEEEeCCCEEEECCCCcEEEEeCC-CCCEEEEEEecCCCcccccCCccceeeccCCcccccccc
Confidence 578999999999999999999999 68999999999877422 1211
Q ss_pred -------------------------------------------------cccc---CccEEEcChhhhhhcCccccc-c-
Q 039441 290 -------------------------------------------------QQRQ---QGTIKRASQEQLKALSHHASS-R- 315 (539)
Q Consensus 290 -------------------------------------------------~~q~---~G~Ivrv~~eql~~l~~~~~~-~- 315 (539)
+++. +|.||+++++ ++.++|.... .
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~if~gf~~~vLa~af~v~~~~~~kl~~~~~~~~~g~Iv~v~~~-l~~~~P~~~~~e~ 255 (476)
T 1fxz_A 177 QQEQGGHQSQKGKHQQEEENEGGSILSGFTLEFLEHAFSVDKQIAKNLQGENEGEDKGAIVTVKGG-LSVIKPPTDEQQQ 255 (476)
T ss_dssp HC-------------------CCCGGGGSCHHHHHHHHTCCHHHHHHHSCC-----CCSEEECSSC-CCCCCC-------
T ss_pred ccccccccccccccccccccccchhhhcCCHHHHHhhhCCCHHHHHhhhccccccccccEEEeCCc-ccccCCccchhhh
Confidence 2233 7999999754 7777663210 0
Q ss_pred -------------CC-----------------C-CCC---CCcceec----C--CCCCcccCCCceEEEeCCcccccccc
Q 039441 316 -------------RR-----------------H-GRG---STAPFNL----L--SRKPIYNNNFGRFFEATPKDYQQLQE 355 (539)
Q Consensus 316 -------------~~-----------------~-~~~---~~~~fnl----~--~~~p~~sn~~G~i~~~~~~~fP~L~~ 355 (539)
+. + .++ ...+|+| . ++.|+|++.+|+++++++.+||+|++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ng~~e~~~~~~l~~ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~~ 335 (476)
T 1fxz_A 256 RPQEEEEEEEDEKPQCKGKDKHCQRPRGSQSKSRRNGIDETICTMRLRHNIGQTSSPDIYNPQAGSVTTATSLDFPALSW 335 (476)
T ss_dssp -----------------------------------------CTTCCCEEECSSSSCCSEEETTTEEEEEECTTTSGGGTT
T ss_pred ccccchhhhhcccccccccccccccccccccccccCCccccccceeeeccccccccCCcccCCCeEEEEeccccCccccc
Confidence 00 0 011 1124444 3 77889999999999999999999999
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
++|++++++|.||||+.|||||+|++|+||++|+++++|++++|. ++++..|++|||
T Consensus 336 l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~-----------------------~~~~~~l~~GDv 392 (476)
T 1fxz_A 336 LRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGE-----------------------RVFDGELQEGRV 392 (476)
T ss_dssp TTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSC-----------------------EEEEEEEETTCE
T ss_pred CcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCC-----------------------EEeeeEEcCCCE
Confidence 999999999999999999999999999999999999999999762 477888999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEeecCCCCccccccccchhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeEecCCh
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSLNARNNQRNFLAGKINIMNQVERETMEVAFNVPARLIERVFGTNPKESYFVAGPE 515 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~na~n~~~~fLAG~~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv~~p~ 515 (539)
+|||+|++|++.| ++++++|++|.+++ ++...+|||+++||++||++||++||+++.++|++|+.++.+. +|+|++.
T Consensus 393 ~viP~G~~H~~~n-g~~~l~~l~f~~s~-~p~~~~laG~~s~~~~~p~~Vla~af~~~~~~v~~l~~~~~e~-~i~~p~~ 469 (476)
T 1fxz_A 393 LIVPQNFVVAARS-QSDNFEYVSFKTND-TPMIGTLAGANSLLNALPEEVIQHTFNLKSQQARQIKNNNPFK-FLVPPQE 469 (476)
T ss_dssp EEECTTCEEEEEE-CSTTEEEEEEESSS-SCCEEESSSTTCTGGGSCHHHHHHHHTCCHHHHHHHHHSCCCS-SEECCCC
T ss_pred EEECCCCeEEEEe-CCCCEEEEEEECCC-CCceeEccchhHHHHhCCHHHHHHHhCcCHHHHHHHHhhCCCc-EEeCCcc
Confidence 9999999999999 68899999999887 8888999999999999999999999999999999999998887 8998876
Q ss_pred hh
Q 039441 516 EQ 517 (539)
Q Consensus 516 ~~ 517 (539)
++
T Consensus 470 ~~ 471 (476)
T 1fxz_A 470 SQ 471 (476)
T ss_dssp C-
T ss_pred cc
Confidence 54
No 12
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=100.00 E-value=3.5e-59 Score=505.92 Aligned_cols=312 Identities=21% Similarity=0.394 Sum_probs=264.8
Q ss_pred ceeEecCCceEEEeeccCccccccc--CcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce------
Q 039441 172 RYRVRSDSGHMRVLQRFSQKSHLLR--GIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE------ 243 (539)
Q Consensus 172 ~~~v~se~G~i~vl~~f~~~s~~l~--gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~------ 243 (539)
..+|+||+|.|++ |+.+++.|+ ||+..|++| +|+||++|||++|++|+||++|+|++|+|.|+|++
T Consensus 23 ~~~~~se~G~~e~---~~~~~~~l~~~gvs~~r~~i---~p~gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~ 96 (510)
T 3c3v_A 23 DNRIESEGGYIET---WNPNNQEFECAGVALSRLVL---RRNALRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPA 96 (510)
T ss_dssp CEEEEETTEEEEE---CCTTSHHHHHHTCEEEEEEE---CTTEEEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEEC
T ss_pred hhhhccCCceEEE---eCCCCcccccCcEEEEEEEE---CCCCCccceecCCCeEEEEEeCEEEEEEEeCCCcccccccc
Confidence 3699999999996 999999987 888777777 99999999999999999999999999999999853
Q ss_pred ------------------------------eeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCCCC-------
Q 039441 244 ------------------------------SFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPGQ------- 286 (539)
Q Consensus 244 ------------------------------~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg~------- 286 (539)
+++|++||||+||||++||+||+| +++|++|+++|+.|.+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g-~~~l~~v~~~d~~n~~nqld~~~r~ 175 (510)
T 3c3v_A 97 QQGRRYQSQRPPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDH-DTDVVAVSLTDTNNNDNQLDQFPRR 175 (510)
T ss_dssp CC--------------------CEEEEESCCEEECTTEEEEECTTCEEEEEECS-SSCEEEEEEECTTBTTCCSCSCCCC
T ss_pred ccccccccccccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCC-CCCEEEEEEeCCCCcccccccccce
Confidence 378999999999999999999999 699999999999875432
Q ss_pred cee-----------------------------------------------------------------------------
Q 039441 287 FRV----------------------------------------------------------------------------- 289 (539)
Q Consensus 287 f~~----------------------------------------------------------------------------- 289 (539)
|.|
T Consensus 176 F~LaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~sgF~~~~La~af 255 (510)
T 3c3v_A 176 FNLAGNHEQEFLRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFSGFTPEFLAQAF 255 (510)
T ss_dssp EESSCCCCCTTGGGCC------------------------------------------------CCTGGGSCHHHHHHHH
T ss_pred eEecCCcccccchhhhccccccccccccccccccccccccccccccccccccccccccccccccccceecCCHHHHHHHh
Confidence 211
Q ss_pred ------------ccc---cCccEEEcChhhhhhcCcccc--------c-----c--CC--------C--CCC---CCcce
Q 039441 290 ------------QQR---QQGTIKRASQEQLKALSHHAS--------S-----R--RR--------H--GRG---STAPF 326 (539)
Q Consensus 290 ------------~~q---~~G~Ivrv~~eql~~l~~~~~--------~-----~--~~--------~--~~~---~~~~f 326 (539)
+.+ .+|.||+++ +.|+.++|... . . +. . .++ ...+|
T Consensus 256 ~v~~~~~~~~l~~~~~~~~~g~Iv~v~-~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ng~~e~~c~~ 334 (510)
T 3c3v_A 256 QVDDRQIVQNLRGENESEEQGAIVTVR-GGLRILSPDRKRGADEEEEYDEDEYEYDEEDRRRGRGSRGSGNGIEETICTA 334 (510)
T ss_dssp TCCCHHHHHHHTTTTCCTTSCSEEECT-TCCCCCCC-----------------------------------CTTTTGGGC
T ss_pred CCCHHHHHHHhhccccccccccEEEeC-CcccccCCchhccccchhhhhhhhccccccccccccccccccCCccccccce
Confidence 112 378999997 44887766421 0 0 00 0 012 11244
Q ss_pred ec----C--CCCCcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCC
Q 039441 327 NL----L--SRKPIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSS 400 (539)
Q Consensus 327 nl----~--~~~p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs 400 (539)
+| . ++.|+|++.+|+++++++.+||+|++++|++++++|.||||+.|||||+|++|+||++|+++|+|++++|.
T Consensus 335 ~l~~ni~~~~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~ 414 (510)
T 3c3v_A 335 TVKKNIGRNRSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGN 414 (510)
T ss_dssp CCEEECSSCSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSC
T ss_pred eeeeccCccccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCC
Confidence 44 3 77888999999999999999999999999999999999999999999999999999999999999999762
Q ss_pred ccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecCCCCccccccccchhccc
Q 039441 401 RWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNARNNQRNFLAGKINIMNQ 480 (539)
Q Consensus 401 ~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na~n~~~~fLAG~~svL~~ 480 (539)
++++..|++|||||||+|++|++.| +++++.|++|.+++ ++...+|||+++||++
T Consensus 415 -----------------------~~~~~~l~~GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~-~p~~~~LaG~~svf~~ 469 (510)
T 3c3v_A 415 -----------------------RVYDEELQEGHVLVVPQNFAVAGKS-QSDNFEYVAFKTDS-RPSIANLAGENSVIDN 469 (510)
T ss_dssp -----------------------EEEEEEEETTCEEEECTTCEEEEEE-CSSEEEEEEEESSS-SCCEEESSSTTSTTTT
T ss_pred -----------------------EEEeEEEcCCcEEEECCCCeEEEEe-CCCCEEEEEEECCC-CcceeecccHhHHHHh
Confidence 4788889999999999999999999 68899999999887 8889999999999999
Q ss_pred CcHHHHHHHcCCCHHHHHHhhcCCCCceeEecCChhh
Q 039441 481 VERETMEVAFNVPARLIERVFGTNPKESYFVAGPEEQ 517 (539)
Q Consensus 481 ~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv~~p~~~ 517 (539)
||++||++||+++.++|++|+.++++. +|+|++.++
T Consensus 470 lp~eVla~aF~v~~e~v~~L~~~~~e~-~i~~p~~~~ 505 (510)
T 3c3v_A 470 LPEEVVANSYGLPREQARQLKNNNPFK-FFVPPSQQS 505 (510)
T ss_dssp SCHHHHHHHHTCCHHHHHHHHHSCCCS-SEECC----
T ss_pred CCHHHHHHHHCcCHHHHHHHHhhCCCc-EEECCcccc
Confidence 999999999999999999999998886 999887654
No 13
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=100.00 E-value=3e-55 Score=475.00 Aligned_cols=307 Identities=20% Similarity=0.335 Sum_probs=255.8
Q ss_pred ceeEecCCceEEEeeccCcccccccCcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCc---------
Q 039441 172 RYRVRSDSGHMRVLQRFSQKSHLLRGIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERR--------- 242 (539)
Q Consensus 172 ~~~v~se~G~i~vl~~f~~~s~~l~gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~--------- 242 (539)
.++|+||+|.|++ |+.++++|+++. +.++.++|+|+||++|||+++++|+||++|+|++|+|.|+|+
T Consensus 20 ~~~~~se~G~~e~---~~~~~~~l~~~g-v~~~r~~i~pggl~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~ 95 (493)
T 2d5f_A 20 DHRVESEGGLIET---WNSQHPELQCAG-VTVSKRTLNRNGLHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQ 95 (493)
T ss_dssp CEEEECSSEEEEE---CCTTSHHHHHHT-CEEEEEEECTTEEEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC--
T ss_pred cceeecCCcEEEE---eCCCChhhccCC-EEEEEEEeCCCcEeCceecCCCeEEEEEeCEEEEEEEeCCCcccccccccc
Confidence 5799999999997 999999998422 444445559999999999999999999999999999999985
Q ss_pred -----------------eeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCCCC-------cee---------
Q 039441 243 -----------------ESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPGQ-------FRV--------- 289 (539)
Q Consensus 243 -----------------~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg~-------f~~--------- 289 (539)
.+++|++||||+||||++|||+|+| +++|++|+++|+.|..++ |.|
T Consensus 96 ~~~~~~~~~~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g-~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~ 174 (493)
T 2d5f_A 96 SSRRGSRSQQQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTG-DEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHP 174 (493)
T ss_dssp -----------CSEEESCEEEEETTEEEEECTTCCEEEEECS-SSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCG
T ss_pred ccccccccccccccccceEEEecCCCEEEECCCCcEEEEeCC-CCCEEEEEEecCcCcccccccccceeeccCCccccch
Confidence 3678999999999999999999998 599999999998765432 221
Q ss_pred ------------------------------------------------------ccc-cCccEEEcChhhhhhcCcccc-
Q 039441 290 ------------------------------------------------------QQR-QQGTIKRASQEQLKALSHHAS- 313 (539)
Q Consensus 290 ------------------------------------------------------~~q-~~G~Ivrv~~eql~~l~~~~~- 313 (539)
+.+ .+|.||+|+.+ |+.+.|...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~nif~gf~~e~La~aF~v~~~~v~kl~~~~~~~g~Iv~v~~~-l~~~~P~~~~ 253 (493)
T 2d5f_A 175 ETMQQQQQQKSHGGRKQGQHQQQEEEGGSVLSGFSKHFLAQSFNTNEDTAEKLRSPDDERKQIVTVEGG-LSVISPKWQE 253 (493)
T ss_dssp GGTC---------------------CCCCGGGGSCHHHHHHHTTCCHHHHHHTTCTTCCSCSEEECTTC-CCCCCSCC--
T ss_pred hhhhhcccccccccccccccccccccccchhhcCCHHHHHhHhCCCHHHHHHhhhcccCcccEEEeCCC-ccccCCchhh
Confidence 112 47899999766 554433210
Q ss_pred ----c------------------------------------------------------cC--CCCCCCC-------cce
Q 039441 314 ----S------------------------------------------------------RR--RHGRGST-------APF 326 (539)
Q Consensus 314 ----~------------------------------------------------------~~--~~~~~~~-------~~f 326 (539)
. .| ...++.. ..+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ng~ee~~~~~~l~~ 333 (493)
T 2d5f_A 254 QEDEDEDEDEEYEQTPSYPPRRPSHGKHEDDEDEDEEEDQPRPDHPPQRPSRPEQQEPRGRGCQTRNGVEENICTMKLHE 333 (493)
T ss_dssp -------------------------------------------------------------------CTTTTGGGCCCEE
T ss_pred hhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccccccccccccCCccccccceeeee
Confidence 0 00 0011211 234
Q ss_pred ecC--CCCCcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccch
Q 039441 327 NLL--SRKPIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQ 404 (539)
Q Consensus 327 nl~--~~~p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~ 404 (539)
||. +..|++++.+|+++.+++.+||+|+++++++++++|.||||+.|||||+|++|+||++|+++|+|+++++.
T Consensus 334 ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~---- 409 (493)
T 2d5f_A 334 NIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGN---- 409 (493)
T ss_dssp ECCCGGGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSC----
T ss_pred cccccCCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCC----
Confidence 554 67888999999999999999999999999999999999999999999999999999999999999998752
Q ss_pred hhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecCCCCccccccccchhcccCcHH
Q 039441 405 ESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNARNNQRNFLAGKINIMNQVERE 484 (539)
Q Consensus 405 ~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na~n~~~~fLAG~~svL~~~p~e 484 (539)
++++..|++|||||||+|++|++.|. +++++||+|++++ ++...+| ++||++||++
T Consensus 410 -------------------~~~~~~l~~GDv~vvP~G~~H~~~n~-~e~~~~l~~~ts~-~p~~~~l---~s~~~~~p~e 465 (493)
T 2d5f_A 410 -------------------AVFDGELRRGQLLVVPQNFVVAEQGG-EQGLEYVVFKTHH-NAVSSYI---KDVFRAIPSE 465 (493)
T ss_dssp -------------------EEEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEEEESST-TCCEEEH---HHHHHHSCHH
T ss_pred -------------------EEEeEEEcCCCEEEECCCCeEeeeeC-CCCEEEEEEECCC-CCcceeH---HHHHHhCCHH
Confidence 47778899999999999999999986 5789999998776 7788888 7999999999
Q ss_pred HHHHHcCCCHHHHHHhhcCCCCceeEecC
Q 039441 485 TMEVAFNVPARLIERVFGTNPKESYFVAG 513 (539)
Q Consensus 485 vLa~AF~vs~e~v~kL~~~q~e~~~fv~~ 513 (539)
||++||+++.++|++|+.+++++ +||++
T Consensus 466 Vla~aF~v~~~~v~~l~~~~~e~-~i~~p 493 (493)
T 2d5f_A 466 VLSNSYNLGQSQVRQLKYQGNSG-PLVNP 493 (493)
T ss_dssp HHHHHHTCCHHHHHHHHHSSCSS-SEECC
T ss_pred HHHHHHCcCHHHHHHHHhcCCCc-eecCC
Confidence 99999999999999999999887 78764
No 14
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=100.00 E-value=1.8e-37 Score=321.37 Aligned_cols=310 Identities=15% Similarity=0.168 Sum_probs=233.6
Q ss_pred CceeecCccceeEecCCceEEEeeccCcccccccCcceeeEEEeeeCCCeeecccccC-CCcEEEEEeceEEEEEEeCCC
Q 039441 163 PYYFHSQRFRYRVRSDSGHMRVLQRFSQKSHLLRGIDNYRLAILEANPSTLVVPHHSD-AETILVLLKGKGVITLVSHER 241 (539)
Q Consensus 163 py~f~~~~f~~~v~se~G~i~vl~~f~~~s~~l~gv~~~Rl~il~l~P~~l~lPh~~d-A~~~~yV~~G~g~i~~v~pg~ 241 (539)
+|.|.-.+-.. +.+++|.++. ++. ..|+....+.+.++++.|++++.||||. +++|+||++|+++++++++++
T Consensus 20 ~~~~~~~~~~~-~~~~~G~~~~---~~~--~~~p~~~~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g 93 (361)
T 2vqa_A 20 AFTYAFSKTPL-VLYDGGTTKQ---VGT--YNFPVSKGMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEG 93 (361)
T ss_dssp CSEECGGGSCC-EEETTEEEEE---EST--TTCTTCCSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTS
T ss_pred ceEEEcccCCc-eecCCceEEE---eCh--hhCccccceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCC
Confidence 35555444333 4679999986 333 3455444456666677999999999888 999999999999999999876
Q ss_pred -ceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCC--CCceec----cc-----------cCccEEEcChh
Q 039441 242 -RESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTP--GQFRVQ----QR-----------QQGTIKRASQE 303 (539)
Q Consensus 242 -~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~p--g~f~~~----~q-----------~~G~Ivrv~~e 303 (539)
..++.|++||+++||+|++||+.|.+ +++++++.++++.+.- ++|... .. ....|-++...
T Consensus 94 ~~~~~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~p~~vLa~~~~v~~~~~~~l~~~ 172 (361)
T 2vqa_A 94 KVEIADVDKGGLWYFPRGWGHSIEGIG-PDTAKFLLVFNDGTFSEGATFSVTDWLSHTPIAWVEENLGWTAAQVAQLPKK 172 (361)
T ss_dssp CEEEEEEETTEEEEECTTCEEEEEECS-SSCEEEEEEESSTTCCTTSSEEHHHHHHTSCHHHHHHHHTCCHHHHTTSCSS
T ss_pred cEEEEEEcCCCEEEECCCCeEEEEeCC-CCCEEEEEEECCCCccccceecHhHHHHhCCHHHHHHHhCcCHHHHHhcccc
Confidence 46899999999999999999999998 4789999999876532 344330 00 00000011101
Q ss_pred hhhhc-----Ccccc----ccCCCCCCCCcceecCCCCCcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecce
Q 039441 304 QLKAL-----SHHAS----SRRRHGRGSTAPFNLLSRKPIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPH 374 (539)
Q Consensus 304 ql~~l-----~~~~~----~~~~~~~~~~~~fnl~~~~p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PH 374 (539)
+..++ ++... ..+.+.......|++....+.+.+.+|.++.+.+.++|.++. +++..+.|.||++..||
T Consensus 173 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~--~~~~~~~l~pg~~~~~H 250 (361)
T 2vqa_A 173 QVYISSYGPASGPLASATPQGQTAKIEVPHTHNLLGQQPLVSLGGNELRLASAKEFPGSFN--MTGALIHLEPGAMRQLH 250 (361)
T ss_dssp CCCEECSSCCCCCGGGCCCSSCCCBCCSCCEEECTTSCCSEEETTEEEEEECTTTCTTSTT--CEEEEEEECTTCEEEEE
T ss_pred CceEEeCCCCCCccccccccCcCCCCCcceEeccccCCCcccCCCceEEEEehhhCcCccc--ceEEEEEECCCcccccc
Confidence 00011 11100 001111223455677777777788899999999999998875 88999999999999999
Q ss_pred ecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcE
Q 039441 375 YNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKL 454 (539)
Q Consensus 375 whpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l 454 (539)
||+++.+++||++|++.++|+++++ +..+..|++||+++||+|.+|++.|.+++++
T Consensus 251 ~H~~~~E~~~Vl~G~~~~~v~~~~g------------------------~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~ 306 (361)
T 2vqa_A 251 WHPNADEWQYVLDGEMDLTVFASEG------------------------KASVSRLQQGDVGYVPKGYGHAIRNSSQKPL 306 (361)
T ss_dssp ECSSCCEEEEEEESCEEEEEECSTT------------------------CEEEEEECTTCEEEECTTCEEEEECCSSSCE
T ss_pred cCCCCCEEEEEEeCEEEEEEEcCCC------------------------cEEEEEECCCCEEEECCCCeEEeEECCCCCE
Confidence 9999999999999999999999875 3456789999999999999999999999999
Q ss_pred EEEEEeecCCCCccccccccchhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeEe
Q 039441 455 LTVGFSLNARNNQRNFLAGKINIMNQVERETMEVAFNVPARLIERVFGTNPKESYFV 511 (539)
Q Consensus 455 ~~v~F~~na~n~~~~fLAG~~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv 511 (539)
.++++.+.+ ++....|| +||+++|++||++||+++.+++++|+ ++++. +++
T Consensus 307 ~~l~~~~~~-~~~~~~~~---~~~~~~~~~vl~~~f~~~~~~~~~l~-~~~~~-~~~ 357 (361)
T 2vqa_A 307 DIVVVFNDG-DYQSIDLS---TWLASNPSSVLGNTFQISPELTKKLP-VQDTI-FSL 357 (361)
T ss_dssp EEEEEESSS-SCCCEEHH---HHHHTSCHHHHHHHHTCCHHHHTTSC-CSCCS-EEC
T ss_pred EEEEEECCC-CcceeeHH---HHhhhCCHHHHHHHHCcCHHHHHhhh-ccCCc-ccc
Confidence 999988765 56666664 69999999999999999999999997 44554 555
No 15
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=100.00 E-value=3.2e-31 Score=277.28 Aligned_cols=302 Identities=12% Similarity=0.158 Sum_probs=219.9
Q ss_pred ceeecCccceeEecCCceEEEeeccCcccccccCcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCC-c
Q 039441 164 YYFHSQRFRYRVRSDSGHMRVLQRFSQKSHLLRGIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHER-R 242 (539)
Q Consensus 164 y~f~~~~f~~~v~se~G~i~vl~~f~~~s~~l~gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~-~ 242 (539)
|+|.-.+-.. ..+++|.++.+.. ..|.+...+.++++++.|++.+.||||++.+|+||++|++.+++++.++ .
T Consensus 48 ~~~~~~~~~~-~~~~~G~~~~~~~-----~~lp~~~~~~~~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~ 121 (385)
T 1j58_A 48 MKFSFSDTHN-RLEKGGYAREVTV-----RELPISENLASVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRS 121 (385)
T ss_dssp CEECGGGSCC-EEETTEEEEEECT-----TTCTTCSSCEEEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCE
T ss_pred eEEEcccCCc-cccCCcEEEEecc-----ccCcccCceEEEEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCCcE
Confidence 6665444333 4579999986332 3455445667777778999999999999999999999999999999744 4
Q ss_pred eeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCC--CCcee----ccccCccEE---EcChhhhhhcC----
Q 039441 243 ESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTP--GQFRV----QQRQQGTIK---RASQEQLKALS---- 309 (539)
Q Consensus 243 ~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~p--g~f~~----~~q~~G~Iv---rv~~eql~~l~---- 309 (539)
.++.|++||+|+||+|++|++.|.+ +.++++.+|++.... .+|.+ ...+..++. .++.+.+..|.
T Consensus 122 ~~~~l~~GD~~~ip~g~~H~~~n~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~evla~~~~vs~~~~~~l~~~~~ 199 (385)
T 1j58_A 122 FIDDVGEGDLWYFPSGLPHSIQALE--EGAEFLLVFDDGSFSENSTFQLTDWLAHTPKEVIAANFGVTKEEISNLPGKEK 199 (385)
T ss_dssp EEEEEETTEEEEECTTCCEEEEEEE--EEEEEEEEESCTTCCGGGEEEHHHHHHTSCHHHHHHHHTCCTGGGTTSCSSCC
T ss_pred EEEEeCCCCEEEECCCCeEEEEECC--CCEEEEEEECCCCccccchhhhhhhhhcccHHHHHHHhCCCHHHHHhcccccc
Confidence 4789999999999999999999996 358888888865432 12222 000000000 01111111110
Q ss_pred -------ccc-----cccCCCCCCCCcceecCCCCCcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecC
Q 039441 310 -------HHA-----SSRRRHGRGSTAPFNLLSRKPIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNS 377 (539)
Q Consensus 310 -------~~~-----~~~~~~~~~~~~~fnl~~~~p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhp 377 (539)
+.. .....+.......|++.+..+ +.+.+|.++.+.+.+++... ++++..+.|.||++..||||+
T Consensus 200 ~i~~~~~p~~l~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~ 276 (385)
T 1j58_A 200 YIFENQLPGSLKDDIVEGPNGEVPYPFTYRLLEQEP-IESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHP 276 (385)
T ss_dssp SEECCCCCCCHHHHCCCCTTCCCSSCSEEEGGGSCC-EECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECS
T ss_pred eEeccCCCCccccccccCCCCCCCCCeeeecccCCC-eeCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCC
Confidence 000 000011112344667777766 56778999999988888654 489999999999999999999
Q ss_pred CCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEE
Q 039441 378 KATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTV 457 (539)
Q Consensus 378 nA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v 457 (539)
.+.+++||++|++.++|.+++| +..+..|++||+++||+|.+|++.|.+++++.++
T Consensus 277 ~~~E~~~Vl~G~~~~~i~~~~g------------------------~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l 332 (385)
T 1j58_A 277 NTHEWQYYISGKARMTVFASDG------------------------HARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFL 332 (385)
T ss_dssp SSCEEEEEEESEEEEEEEEETT------------------------EEEEEEEESSCEEEECTTCBEEEEECSSSCEEEE
T ss_pred CCCEEEEEEeCeEEEEEEcCCC------------------------cEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEE
Confidence 8899999999999999987765 1234689999999999999999999999999999
Q ss_pred EEeecCCCCccccccccchhcccCcHHHHHHHcCCCHHHHHHhhcCC
Q 039441 458 GFSLNARNNQRNFLAGKINIMNQVERETMEVAFNVPARLIERVFGTN 504 (539)
Q Consensus 458 ~F~~na~n~~~~fLAG~~svL~~~p~evLa~AF~vs~e~v~kL~~~q 504 (539)
++...+.... . +..+||..+|.++|+++|+++.+++++|++.+
T Consensus 333 ~v~~~~~~~d-~---~~~~~l~~~~~~v~~~~f~~~~~~~~~l~~~~ 375 (385)
T 1j58_A 333 EIFKDDHYAD-V---SLNQWLAMLPETFVQAHLDLGKDFTDVLSKEK 375 (385)
T ss_dssp EEESSSSCCC-E---EHHHHHHTSCHHHHHHHHTCCHHHHTTCCSSC
T ss_pred EEECCCCccc-c---CHHHHHHhCCHHHHHHHhCCCHHHHHhhhccC
Confidence 9876652222 1 22689999999999999999999999998543
No 16
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.96 E-value=2.3e-28 Score=231.73 Aligned_cols=164 Identities=20% Similarity=0.315 Sum_probs=141.3
Q ss_pred CCcceecCCCCCcccCCCceEEEeCC-----cccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEec
Q 039441 322 STAPFNLLSRKPIYNNNFGRFFEATP-----KDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGG 396 (539)
Q Consensus 322 ~~~~fnl~~~~p~~sn~~G~i~~~~~-----~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~ 396 (539)
.++.|++.+..+.+.+.+|++.++++ ..||.|+ ++++++++|.||+++.|| |++|++|+||++|++++++++
T Consensus 2 ~p~~f~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~ 78 (178)
T 1dgw_A 2 NPYLFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 78 (178)
T ss_dssp CTTEECGGGEEEEEEETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred CCceechhhcccceEcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEe
Confidence 35778888888999999999999877 4566666 499999999999999999 889999999999999999999
Q ss_pred CCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCC-cEEEEEEeecCCCCc---ccccc
Q 039441 397 PLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNE-KLLTVGFSLNARNNQ---RNFLA 472 (539)
Q Consensus 397 p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne-~l~~v~F~~na~n~~---~~fLA 472 (539)
+++ ..+..|++||+++||+|.+||+.|.+++ .|.++++..+++++. .++||
T Consensus 79 ~~~-------------------------~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~ 133 (178)
T 1dgw_A 79 PDG-------------------------RDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLS 133 (178)
T ss_dssp TTE-------------------------EEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESS
T ss_pred CCC-------------------------cEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeecc
Confidence 875 2356899999999999999999999886 799998876664554 57899
Q ss_pred cc---chhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeEecC
Q 039441 473 GK---INIMNQVERETMEVAFNVPARLIERVFGTNPKESYFVAG 513 (539)
Q Consensus 473 G~---~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv~~ 513 (539)
|+ ++||++||++||++||+++.+++++|+..+++.+.||..
T Consensus 134 g~~~~~~~~~~~p~~vla~af~v~~~~~~~l~~~~~~~~~iv~~ 177 (178)
T 1dgw_A 134 STKRLPSYLSAFSKNFLEASYDSPYDEIEQTLLQEEQEGVIVKM 177 (178)
T ss_dssp CCSSCCCGGGGSCHHHHHHHHTSCHHHHHHHTTSCCSSSSEEEC
T ss_pred CCcCcchhhhhCCHHHHHHHHCcCHHHHHHHhcCcCcCceEEEc
Confidence 98 799999999999999999999999999554434478764
No 17
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.96 E-value=1.1e-28 Score=266.59 Aligned_cols=175 Identities=19% Similarity=0.344 Sum_probs=138.8
Q ss_pred CcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCc-cchhhhhhhh
Q 039441 333 PIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSR-WSQESQREQQ 411 (539)
Q Consensus 333 p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~-~s~~~~~g~~ 411 (539)
..+.+.+|.+..++ .++|.|+++||++++++|.||||++|||| +|++|+||++|+|.++||+|+++. ..++. ++
T Consensus 22 ~~~~se~G~~e~~~-~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~---~~ 96 (496)
T 3ksc_A 22 NRIESEGGLIETWN-PNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGCPETFEEPQ---ES 96 (496)
T ss_dssp EEEEETTEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTCCCC----------
T ss_pred cccCCCCcEEEecc-ccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCCCccchhhh---hc
Confidence 44667899977776 67899999999999999999999999999 999999999999999999998765 11100 00
Q ss_pred HHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEE-eecCCCC------cccccccc----------
Q 039441 412 EEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGF-SLNARNN------QRNFLAGK---------- 474 (539)
Q Consensus 412 ~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F-~~na~n~------~~~fLAG~---------- 474 (539)
.+.+.++..+.|+++ .+|++|||||||+|++||++|+|+++|++|++ .+++.+| ..+||||+
T Consensus 97 ~~~~~~~~~d~~qk~-~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~ 175 (496)
T 3ksc_A 97 EQGEGRRYRDRHQKV-NRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQH 175 (496)
T ss_dssp --------CCCCCCE-EEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC
T ss_pred ccccccccccchhee-eccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCccccccccc
Confidence 011123456778887 49999999999999999999999999999984 4444333 47899998
Q ss_pred ------------chhcccCcHHHHHHHcCCCHHHHHHhh--cCCCCceeEecC
Q 039441 475 ------------INIMNQVERETMEVAFNVPARLIERVF--GTNPKESYFVAG 513 (539)
Q Consensus 475 ------------~svL~~~p~evLa~AF~vs~e~v~kL~--~~q~e~~~fv~~ 513 (539)
.|||++|++++|+.||||+.++|++|+ ..++..+.||..
T Consensus 176 ~~~~~~~~~~~~~ni~sgF~~e~La~Af~v~~e~~~kl~~~~~~~~rg~IV~v 228 (496)
T 3ksc_A 176 QQGGKQEQENEGNNIFSGFKRDFLEDAFNVNRHIVDRLQGRNEDEEKGAIVKV 228 (496)
T ss_dssp -----------CCSGGGGSCHHHHHHHHTCCHHHHHHHTTTTCCTTTCSEEEC
T ss_pred cccccccccccCCCchhhcCHHHHHHHHCCCHHHHHHHHhhcccccCccEEEe
Confidence 699999999999999999999999999 443333467643
No 18
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.96 E-value=1.9e-28 Score=263.10 Aligned_cols=179 Identities=18% Similarity=0.209 Sum_probs=145.2
Q ss_pred CcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCcc---ch-hh--
Q 039441 333 PIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRW---SQ-ES-- 406 (539)
Q Consensus 333 p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~---s~-~~-- 406 (539)
..+.+.+|.+..|+..+ |.|+++++++++++|.||||++|||| +|++|+||++|+|.++||+|+|++. ++ +.
T Consensus 19 ~~~~se~G~~e~w~~~~-~~L~~~gvs~~r~~i~p~Gl~lPh~~-~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~ 96 (466)
T 3kgl_A 19 HVLKAEAGRIEVWDHHA-PQLRCSGVSFVRYIIESKGLYLPSFF-STAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPG 96 (466)
T ss_dssp EEEEETTEEEEECCTTS-HHHHHHTEEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCC
T ss_pred ceeeCCCcEEEEECCCC-hhhccCCeEEEEEEECCCCEeCCeeC-CCCeEEEEEeCeEEEEEecCCCcchhhcccccccc
Confidence 44678899999998766 99999999999999999999999999 5999999999999999999999871 10 00
Q ss_pred -------hhhhh---------H-HHH-------------HHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEE
Q 039441 407 -------QREQQ---------E-EEE-------------EEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLT 456 (539)
Q Consensus 407 -------~~g~~---------~-~~~-------------~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~ 456 (539)
++|++ + +++ .+...++++++ .+|++|||++||+|++||++|+|+++|++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv-~~l~~GDvi~iPaG~~~~~~N~g~e~L~~ 175 (466)
T 3kgl_A 97 GGSPFGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKV-EHIRTGDTIATHPGVAQWFYNDGNQPLVI 175 (466)
T ss_dssp C-----------------------------------------CCEEESCE-EEEETTEEEEECTTCEEEEECCSSSCEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccceee-ccccCCCEEEECCCCcEEEEeCCCCcEEE
Confidence 00000 0 000 12345778887 59999999999999999999999999999
Q ss_pred EEEeecCCC-------Cccccccccc----------------hhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeEecC
Q 039441 457 VGFSLNARN-------NQRNFLAGKI----------------NIMNQVERETMEVAFNVPARLIERVFGTNPKESYFVAG 513 (539)
Q Consensus 457 v~F~~na~n-------~~~~fLAG~~----------------svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv~~ 513 (539)
|++.+.+++ ...+||||+. |||++|++++|++||||+.++|++|+..+++.++||..
T Consensus 176 l~~~d~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~sGF~~e~La~Af~v~~e~~~kL~~~q~~~G~Iv~v 255 (466)
T 3kgl_A 176 VSVLDLASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILNGFTPEVLAKAFKIDVRTAQQLQNQQDNRGNIIRV 255 (466)
T ss_dssp EEEEESSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGGGSCHHHHHHHHTSCHHHHHHHTCTTCCSCSEEEC
T ss_pred EEEEcCCCcccccCCceeeeEecCCCccccccccccccccCCCccccCCHHHHHHHhCCCHHHHHHHhccccCceeEEEe
Confidence 998765422 2568999986 89999999999999999999999999888755578866
Q ss_pred C
Q 039441 514 P 514 (539)
Q Consensus 514 p 514 (539)
+
T Consensus 256 ~ 256 (466)
T 3kgl_A 256 Q 256 (466)
T ss_dssp C
T ss_pred c
Confidence 4
No 19
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.95 E-value=1e-27 Score=259.76 Aligned_cols=187 Identities=19% Similarity=0.325 Sum_probs=144.3
Q ss_pred CcceecCCCCCc--ccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCC
Q 039441 323 TAPFNLLSRKPI--YNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSS 400 (539)
Q Consensus 323 ~~~fnl~~~~p~--~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs 400 (539)
...++|.+..|. +.+.+|.+..++ .+.|.|+++++++++++|+||||++|||| ++++|+||++|+|+++||+|+|+
T Consensus 9 c~~~~L~a~~P~~~~~se~G~~e~~~-~~~~~l~~~gv~~~r~~i~pggl~~Ph~~-~~~~i~yV~~G~g~vg~v~pgc~ 86 (493)
T 2d5f_A 9 CQLNNLNALEPDHRVESEGGLIETWN-SQHPELQCAGVTVSKRTLNRNGLHLPSYS-PYPQMIIVVQGKGAIGFAFPGCP 86 (493)
T ss_dssp TCCSCCCCBCCCEEEECSSEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEEC-SSCEEEEEEECEEEEEECCTTCC
T ss_pred CCcccCCCCCCcceeecCCcEEEEeC-CCChhhccCCEEEEEEEeCCCcEeCceec-CCCeEEEEEeCEEEEEEEeCCCc
Confidence 346778777664 667889876665 55699999999999999999999999999 68999999999999999999987
Q ss_pred c-cchhhhhhhhHHH-HHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecC--CC-----Cccccc
Q 039441 401 R-WSQESQREQQEEE-EEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNA--RN-----NQRNFL 471 (539)
Q Consensus 401 ~-~s~~~~~g~~~~~-~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na--~n-----~~~~fL 471 (539)
+ ..+...+..++.+ .+....+.++++ .+|++||||+||+|++||++|+++++|++|++...+ .| +..+||
T Consensus 87 et~~~~~~~~~~~~~~~~~~~~d~~qkv-~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~L 165 (493)
T 2d5f_A 87 ETFEKPQQQSSRRGSRSQQQLQDSHQKI-RHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYL 165 (493)
T ss_dssp CCEEECC-------------CSEEESCE-EEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEES
T ss_pred cccccccccccccccccccccccccceE-EEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeec
Confidence 5 1110000000000 000022344445 489999999999999999999999999999987633 12 367899
Q ss_pred ccc---------------------------------chhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeEec
Q 039441 472 AGK---------------------------------INIMNQVERETMEVAFNVPARLIERVFGTNPKESYFVA 512 (539)
Q Consensus 472 AG~---------------------------------~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv~ 512 (539)
||+ +|||++|++++||+||+|+.++|++|+..+++.++||.
T Consensus 166 aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nif~gf~~e~La~aF~v~~~~v~kl~~~~~~~g~Iv~ 239 (493)
T 2d5f_A 166 AGNPDIEHPETMQQQQQQKSHGGRKQGQHQQQEEEGGSVLSGFSKHFLAQSFNTNEDTAEKLRSPDDERKQIVT 239 (493)
T ss_dssp SSCCCCSCGGGTC---------------------CCCCGGGGSCHHHHHHHTTCCHHHHHHTTCTTCCSCSEEE
T ss_pred cCCccccchhhhhhcccccccccccccccccccccccchhhcCCHHHHHhHhCCCHHHHHHhhhcccCcccEEE
Confidence 984 48999999999999999999999999988875557886
No 20
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.95 E-value=1.1e-27 Score=257.10 Aligned_cols=184 Identities=19% Similarity=0.279 Sum_probs=144.2
Q ss_pred ecCCCCCc--ccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCc-c-
Q 039441 327 NLLSRKPI--YNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSR-W- 402 (539)
Q Consensus 327 nl~~~~p~--~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~-~- 402 (539)
+|....|. +.+.+|.+..|++.+ +.|+|++|++++++|.||||++|||| +|++|+||++|+|+++||.|+|++ .
T Consensus 18 ~l~a~eP~~~i~se~G~~e~~d~~~-~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc~etf~ 95 (465)
T 3qac_A 18 RLTALEPTNRIQAERGLTEVWDSNE-QEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGCPETYE 95 (465)
T ss_dssp CCCCBCCCEEEEETTEEEEECCTTS-HHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCC-
T ss_pred cCCCCCCccceeCCCcEEEEECCCC-hhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCCCceee
Confidence 45455554 678899999998655 68999999999999999999999999 999999999999999999998765 1
Q ss_pred -chh----------hhhhhhH-HHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecCC------
Q 039441 403 -SQE----------SQREQQE-EEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNAR------ 464 (539)
Q Consensus 403 -s~~----------~~~g~~~-~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na~------ 464 (539)
+++ +++|+.+ +++.+...+.++++ .+|++||||+||+|++||++|+|+++|++|++.+.++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqk~-~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld 174 (465)
T 3qac_A 96 SGSQQFQGGEDERIREQGSRKFGMRGDRFQDQHQKI-RHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLD 174 (465)
T ss_dssp -----------------------------CCCCCCE-EEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSC
T ss_pred cchhccccccccccccccccccccccccccccccce-eeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccc
Confidence 100 0111111 11222345666766 7999999999999999999999999999998776542
Q ss_pred --CCcccccccc----------------------chhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeEecC
Q 039441 465 --NNQRNFLAGK----------------------INIMNQVERETMEVAFNVPARLIERVFGTNPKESYFVAG 513 (539)
Q Consensus 465 --n~~~~fLAG~----------------------~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv~~ 513 (539)
++..+||||+ .|||++|++++|+.||||+.+++++|+..+++.+.||..
T Consensus 175 ~~~~r~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~ni~sgF~~e~La~Af~v~~~~~~kl~~~q~~rG~Ivrv 247 (465)
T 3qac_A 175 KNFPTRFYLAGKPQQEHSGEHQFSRESRRGERNTGNIFRGFETRLLAESFGVSEEIAQKLQAEQDDRGNIVRV 247 (465)
T ss_dssp SSSCCEEESSSCCCCSCC--------------CCCCGGGGSCHHHHHHHHTCCHHHHHHHHTTTCCSCSEEEC
T ss_pred cccceeEEecCCCccccccccccccccccccccccchhhcCCHHHHHHHhCCCHHHHHHhhhccccceeEEEe
Confidence 3456899997 489999999999999999999999999887755567754
No 21
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.95 E-value=2.4e-27 Score=224.73 Aligned_cols=129 Identities=34% Similarity=0.723 Sum_probs=121.4
Q ss_pred CCCceeecCccceeEecCCceEEEeeccCcccccccCcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCC
Q 039441 161 NNPYYFHSQRFRYRVRSDSGHMRVLQRFSQKSHLLRGIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHE 240 (539)
Q Consensus 161 ~~py~f~~~~f~~~v~se~G~i~vl~~f~~~s~~l~gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg 240 (539)
+|||+|+.++|++++++++|.+++|..|+.++++|+|+..+.++.++++|+++++|||+++++|+||++|++++++++++
T Consensus 1 ~~p~~f~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~~~ 80 (178)
T 1dgw_A 1 NNPYLFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPD 80 (178)
T ss_dssp CCTTEECGGGEEEEEEETTEEEEEECCTTSSCGGGGGGTTEEEEEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETT
T ss_pred CCCceechhhcccceEcCCCEEEEEcccCCcchhcCCcCcEEEEEEEecCCcEecCcCCCCCEEEEEEeEEEEEEEEeCC
Confidence 58999999999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred CceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCCCCcee
Q 039441 241 RRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPGQFRV 289 (539)
Q Consensus 241 ~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg~f~~ 289 (539)
+..++.|++||+|+||+|++||++|+++.++|+++.++++.++||.|..
T Consensus 81 ~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~ 129 (178)
T 1dgw_A 81 GRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVED 129 (178)
T ss_dssp EEEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCE
T ss_pred CcEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEE
Confidence 9899999999999999999999999986568999999999888886543
No 22
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.95 E-value=2.7e-27 Score=254.48 Aligned_cols=182 Identities=20% Similarity=0.315 Sum_probs=142.4
Q ss_pred ecCCCCCc--ccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCc-cc
Q 039441 327 NLLSRKPI--YNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSR-WS 403 (539)
Q Consensus 327 nl~~~~p~--~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~-~s 403 (539)
+|....|. +.+++|.+..++. +.|.|+++++++++++|.|||+++|||| +|++|+||++|+|++++|+|+|+. ..
T Consensus 31 ~l~a~eP~~~v~se~G~~~~~~~-~~~~l~~~gvs~~r~~i~pggl~~Ph~h-~a~ei~yVl~G~g~vg~v~p~~~~tf~ 108 (459)
T 2e9q_A 31 NLRAQDPVRRAEAEAGFTEVWDQ-DNDEFQCAGVNMIRHTIRPKGLLLPGFS-NAPKLIFVAQGFGIRGIAIPGCAETYQ 108 (459)
T ss_dssp SCCCBCCCEEEEETTEEEEECCT-TSHHHHHHTEEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEECCTTCCCCEE
T ss_pred cCCcCCCCceEecCCcEEEecCC-CChhhccCceEEEEEEEcCCCEecceec-CCceEEEEEeeEEEEEEEeCCCcchhc
Confidence 44444444 7889999888765 5599999999999999999999999999 799999999999999999999864 11
Q ss_pred hhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecCC--C-----Ccccccccc--
Q 039441 404 QESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNAR--N-----NQRNFLAGK-- 474 (539)
Q Consensus 404 ~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na~--n-----~~~~fLAG~-- 474 (539)
+.. +.+++ .+....+..++ ..+|++||||+||+|++||++|+|+++|++|++.++++ | +..+||||.
T Consensus 109 ~~~-~~~~~--~~~~~~d~~q~-~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~ 184 (459)
T 2e9q_A 109 TDL-RRSQS--AGSAFKDQHQK-IRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPE 184 (459)
T ss_dssp ECC-C---------CCCEEECC-CEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCC
T ss_pred cch-hhccc--cccccccccce-eEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCcc
Confidence 000 00000 00011122222 36899999999999999999999999999999876542 2 456899985
Q ss_pred ----------------------chhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeEecCC
Q 039441 475 ----------------------INIMNQVERETMEVAFNVPARLIERVFGTNPKESYFVAGP 514 (539)
Q Consensus 475 ----------------------~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv~~p 514 (539)
+|||++||++||++||+|+.++|++|+..+++.++||...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~nif~gf~~evLa~aF~v~~~~v~kL~~~~~~~G~Iv~~~ 246 (459)
T 2e9q_A 185 QVERGVEEWERSSRKGSSGEKSGNIFSGFADEFLEEAFQIDGGLVRKLKGEDDERDRIVQVD 246 (459)
T ss_dssp CCSSTTCC------------CCCCTTTTSCHHHHHHHHTCCHHHHHHHHTTTCCSTTEEECC
T ss_pred ccchhhhccccccccccccccccchhhcCCHHHHHhhcCCCHHHHHhhhhcccCCccEEEeC
Confidence 3899999999999999999999999998877555888754
No 23
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.94 E-value=7.1e-27 Score=252.71 Aligned_cols=178 Identities=20% Similarity=0.307 Sum_probs=140.5
Q ss_pred CcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCc-c--ch-hh--
Q 039441 333 PIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSR-W--SQ-ES-- 406 (539)
Q Consensus 333 p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~-~--s~-~~-- 406 (539)
..+...+|.+..|+ .++|.|+++||++++++|.||||++|||| +|++|+||++|++.++||.|+|++ . ++ .+
T Consensus 24 ~~i~se~G~~e~w~-~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~-~a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~ 101 (531)
T 3fz3_A 24 NRIQAEAGQIETWN-FNQGDFQCAGVAASRITIQRNGLHLPSYS-NAPQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQ 101 (531)
T ss_dssp EEEEETTEEEEECC-TTSHHHHHHTEEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEECCTTCCCCEECCCC----
T ss_pred hhcccCCceEEEeC-CCChhhccCcceEEEEEecCCCEeCCccC-CCCeEEEEEECcEEEEEEcCCCccccccccccccc
Confidence 34678899988887 56999999999999999999999999999 599999999999999999999987 1 00 00
Q ss_pred --------------------hhhh--------------hHH----------------HHHHhhh--cceeeEEeeeCCCc
Q 039441 407 --------------------QREQ--------------QEE----------------EEEEESS--RELQKISANLSPGV 434 (539)
Q Consensus 407 --------------------~~g~--------------~~~----------------~~~e~~~--~~y~~~~~~L~~GD 434 (539)
++|+ +.+ ++.+... ++++++ .+|++||
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv-~~vr~GD 180 (531)
T 3fz3_A 102 GRQQEQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKT-RRIREGD 180 (531)
T ss_dssp ---------------------------------------------------------------CCSCEESCC-EEEETTE
T ss_pred cccccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceee-ecccCCc
Confidence 0000 000 0011123 677777 5899999
Q ss_pred EEEeCCCCeEEEEcCCCCcEEEEEEeecCC-------CCcccccccc---------------------------------
Q 039441 435 VFIIPPGHPIALVASPNEKLLTVGFSLNAR-------NNQRNFLAGK--------------------------------- 474 (539)
Q Consensus 435 V~vVPaG~~h~i~n~gne~l~~v~F~~na~-------n~~~~fLAG~--------------------------------- 474 (539)
|++||+|.+||++|+|+++|++|++.+.++ ++..|||||+
T Consensus 181 viaiPaG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (531)
T 3fz3_A 181 VVAIPAGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPR 260 (531)
T ss_dssp EEEECTTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC--------------------------
T ss_pred EEEECCCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccc
Confidence 999999999999999999999998765431 2456899997
Q ss_pred --------chhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeEecC
Q 039441 475 --------INIMNQVERETMEVAFNVPARLIERVFGTNPKESYFVAG 513 (539)
Q Consensus 475 --------~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv~~ 513 (539)
.|||++|+.++||.||||+.+++++|+..++..+.||..
T Consensus 261 ~~~~~~~~~nifsGFs~e~La~A~~v~~~~a~kLq~~~~~rg~IVrv 307 (531)
T 3fz3_A 261 QQEQQGNGNNVFSGFNTQLLAQALNVNEETARNLQGQNDNRNQIIQV 307 (531)
T ss_dssp ------CCSSGGGGSCHHHHHHHHTSCHHHHHHHHTSSCCSCSEEEC
T ss_pred hhhhcccCCCeeecCCHHHHHHHHCCCHHHHHHHhcccccCceEEEe
Confidence 389999999999999999999999999877644467633
No 24
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.93 E-value=4.7e-26 Score=247.02 Aligned_cols=178 Identities=19% Similarity=0.308 Sum_probs=137.8
Q ss_pred CcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCcc---chh----
Q 039441 333 PIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRW---SQE---- 405 (539)
Q Consensus 333 p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~---s~~---- 405 (539)
..+.+.+|.+..+++ +.|.|+|++|++++++|.|||+++|||| +|++|+||++|+|+++||.|+|+.- ++.
T Consensus 24 ~~~~se~G~~e~~~~-~~~~l~~~gvs~~r~~i~p~gl~lPh~~-~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~ 101 (510)
T 3c3v_A 24 NRIESEGGYIETWNP-NNQEFECAGVALSRLVLRRNALRRPFYS-NAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRR 101 (510)
T ss_dssp EEEEETTEEEEECCT-TSHHHHHHTCEEEEEEECTTEEEEEEEC-SSCEEEEEEECCEEEEEECTTCCCCEEEECCC---
T ss_pred hhhccCCceEEEeCC-CCcccccCcEEEEEEEECCCCCccceec-CCCeEEEEEeCEEEEEEEeCCCccccccccccccc
Confidence 346788999887775 4599999999999999999999999998 7999999999999999999998641 000
Q ss_pred ---hhhhhhHHHH--HHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecCCC-------Cccccccc
Q 039441 406 ---SQREQQEEEE--EEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNARN-------NQRNFLAG 473 (539)
Q Consensus 406 ---~~~g~~~~~~--~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na~n-------~~~~fLAG 473 (539)
.++|++.+++ .....+.++++ .+|++||||+||+|.+||++|.|+++|++|++++.++. +..+||||
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~d~~qkv-~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG 180 (510)
T 3c3v_A 102 YQSQRPPRRLQEEDQSQQQQDSHQKV-HRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAG 180 (510)
T ss_dssp -----------------CEEEEESCC-EEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSC
T ss_pred cccccccccccccccccccccccceE-EEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecC
Confidence 0111211111 11122344544 68999999999999999999999999999987765421 35688998
Q ss_pred c----------------------------------------------------------chhcccCcHHHHHHHcCCC-H
Q 039441 474 K----------------------------------------------------------INIMNQVERETMEVAFNVP-A 494 (539)
Q Consensus 474 ~----------------------------------------------------------~svL~~~p~evLa~AF~vs-~ 494 (539)
+ .|||++|++++|++||||+ .
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~sgF~~~~La~af~v~~~ 260 (510)
T 3c3v_A 181 NHEQEFLRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFSGFTPEFLAQAFQVDDR 260 (510)
T ss_dssp CCCCTTGGGCC------------------------------------------------CCTGGGSCHHHHHHHHTCCCH
T ss_pred CcccccchhhhccccccccccccccccccccccccccccccccccccccccccccccccccceecCCHHHHHHHhCCCHH
Confidence 2 3799999999999999999 9
Q ss_pred HHHHHhhcCCC--CceeEecC
Q 039441 495 RLIERVFGTNP--KESYFVAG 513 (539)
Q Consensus 495 e~v~kL~~~q~--e~~~fv~~ 513 (539)
+++++|+..++ +.++||..
T Consensus 261 ~~~~~l~~~~~~~~~g~Iv~v 281 (510)
T 3c3v_A 261 QIVQNLRGENESEEQGAIVTV 281 (510)
T ss_dssp HHHHHHTTTTCCTTSCSEEEC
T ss_pred HHHHHhhccccccccccEEEe
Confidence 99999998776 34578875
No 25
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.93 E-value=7e-26 Score=244.59 Aligned_cols=175 Identities=21% Similarity=0.302 Sum_probs=135.3
Q ss_pred CCcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCc-c--chh-hh
Q 039441 332 KPIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSR-W--SQE-SQ 407 (539)
Q Consensus 332 ~p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~-~--s~~-~~ 407 (539)
.-.+.+++|.+..++.. .|.|++++|++++++|.|||+++|||| +|++|+||++|+|++++|.|+|+. . +.. ++
T Consensus 23 ~~~v~se~G~~e~~~~~-~~~l~~~gvs~~r~~l~Pggl~~Ph~~-~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~ 100 (476)
T 1fxz_A 23 DNRIESEGGLIETWNPN-NKPFQCAGVALSRCTLNRNALRRPSYT-NGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQ 100 (476)
T ss_dssp SCEEEETTEEEEECCTT-SHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTCCCC---------
T ss_pred ceEEecCCceEEeeCCC-ChhhccCceEEEEEEEcCCCEecceec-CCceEEEEEecEEEEEEEcCCCcchhhccccccc
Confidence 34568899998887754 599999999999999999999999998 699999999999999999999864 1 100 00
Q ss_pred hhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecCC-------CCcccccccc------
Q 039441 408 REQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNAR-------NNQRNFLAGK------ 474 (539)
Q Consensus 408 ~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na~-------n~~~~fLAG~------ 474 (539)
++++ ....+.++++ .+|++||||+||+|.+||++|+|+++|++|+++..+. +...++|||.
T Consensus 101 ~~~~-----~~~~d~~qk~-~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~ 174 (476)
T 1fxz_A 101 RGQS-----SRPQDRHQKI-YNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFL 174 (476)
T ss_dssp --------------CCCCE-EEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTH
T ss_pred cccc-----cccccccceE-EEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCcccccc
Confidence 1110 0011223333 6899999999999999999999999999998775431 1356889984
Q ss_pred ------------------------chhcccCcHHHHHHHcCCCHHHHHHhhcCCC--CceeEecCC
Q 039441 475 ------------------------INIMNQVERETMEVAFNVPARLIERVFGTNP--KESYFVAGP 514 (539)
Q Consensus 475 ------------------------~svL~~~p~evLa~AF~vs~e~v~kL~~~q~--e~~~fv~~p 514 (539)
.|||++||++|||+||+|+.++|++|+..++ +.++||+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~if~gf~~~vLa~af~v~~~~~~kl~~~~~~~~~g~Iv~v~ 240 (476)
T 1fxz_A 175 KYQQEQGGHQSQKGKHQQEEENEGGSILSGFTLEFLEHAFSVDKQIAKNLQGENEGEDKGAIVTVK 240 (476)
T ss_dssp HHHC-------------------CCCGGGGSCHHHHHHHHTCCHHHHHHHSCC-----CCSEEECS
T ss_pred ccccccccccccccccccccccccchhhhcCCHHHHHhhhCCCHHHHHhhhccccccccccEEEeC
Confidence 3799999999999999999999999998776 345888754
No 26
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.93 E-value=5.7e-26 Score=240.22 Aligned_cols=170 Identities=18% Similarity=0.281 Sum_probs=142.8
Q ss_pred cceecC--C-CCCcccCCCceEEEe--CCcccccccccc-eeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecC
Q 039441 324 APFNLL--S-RKPIYNNNFGRFFEA--TPKDYQQLQEID-AGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGP 397 (539)
Q Consensus 324 ~~fnl~--~-~~p~~sn~~G~i~~~--~~~~fP~L~~l~-isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p 397 (539)
.||.+. + ..+.+.+++|.+..+ ...++|.|++++ +++++++|.|||+++|||| +|++|+||++|+|+++||.+
T Consensus 12 ~p~~f~~~~~~~~~~~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~-~a~ei~yVl~G~~~v~~v~~ 90 (397)
T 2phl_A 12 NPFYFNSDNSWNTLFKNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQA-DAELLLVVRSGSAILVLVKP 90 (397)
T ss_dssp CTTEECGGGTEEEEEEETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEE-SEEEEEEEEESEEEEEEEET
T ss_pred CCcEeccchhccceEEcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEec-CCCeEEEEEeeeEEEEEEeC
Confidence 455554 4 448899999999997 334568999997 9999999999999999998 99999999999999999999
Q ss_pred CCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE------EEeCCCCeEEEEcCC-CCcEEEEEEeecCCCC--cc
Q 039441 398 LSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV------FIIPPGHPIALVASP-NEKLLTVGFSLNARNN--QR 468 (539)
Q Consensus 398 ~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV------~vVPaG~~h~i~n~g-ne~l~~v~F~~na~n~--~~ 468 (539)
++ ..+..|++||| ++||+|.+||++|.+ +++|.+|+++..++++ ..
T Consensus 91 ~~-------------------------~~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~ 145 (397)
T 2phl_A 91 DD-------------------------RREYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHE 145 (397)
T ss_dssp TT-------------------------EEEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCE
T ss_pred CC-------------------------cEEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCcccee
Confidence 75 24689999999 999999999999998 7899999876544333 34
Q ss_pred cccccc---chhcccCcHHHHHHHcCCCHHHHHHhhcCCC--CceeEecCChhhhh
Q 039441 469 NFLAGK---INIMNQVERETMEVAFNVPARLIERVFGTNP--KESYFVAGPEEQQQ 519 (539)
Q Consensus 469 ~fLAG~---~svL~~~p~evLa~AF~vs~e~v~kL~~~q~--e~~~fv~~p~~~~~ 519 (539)
++|||. .|||++||++||++||+++.+++++|+..+. +.++||..+..+++
T Consensus 146 f~L~G~~~~~s~~~~~~~~vLa~af~v~~~~v~~l~~~~~~q~~~~Iv~~~~~~~~ 201 (397)
T 2phl_A 146 FFLSSTEAQQSYLQEFSKHILEASFNSKFEEINRVLFEEEGQQEGVIVNIDSEQIK 201 (397)
T ss_dssp EECCCBTTBCCGGGGSCHHHHHHHHTSCHHHHHHHHTCSTTCBSSSEEECCTTTHH
T ss_pred eeccCCCchhHHhhcCCHHHHHHHhCCCHHHHHhhhhcccccccCceEEcCcccch
Confidence 788885 4799999999999999999999999994443 23489988866544
No 27
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.92 E-value=4e-25 Score=235.15 Aligned_cols=154 Identities=23% Similarity=0.337 Sum_probs=130.3
Q ss_pred cceecC--CCCCcccCCCceEEEeCCcc--ccccccc-ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCC
Q 039441 324 APFNLL--SRKPIYNNNFGRFFEATPKD--YQQLQEI-DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPL 398 (539)
Q Consensus 324 ~~fnl~--~~~p~~sn~~G~i~~~~~~~--fP~L~~l-~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~ 398 (539)
.||.+. +-...+.+++|.+..|...+ .+.|.++ ++++++++|.|||+++||| ++|++|+||++|+|++++|.++
T Consensus 5 ~p~~f~~~~f~~~~~se~G~i~~l~~f~~~s~~l~~l~~~~l~~~~l~p~gl~~Phh-~~A~ei~yV~~G~g~~g~V~~~ 83 (418)
T 3s7i_A 5 NPFYFPSRRFSTRYGNQNGRIRVLQRFDQRSRQFQNLQNHRIVQIEAKPNTLVLPKH-ADADNILVIQQGQATVTVANGN 83 (418)
T ss_dssp CTTEECGGGEEEEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEEE-ESEEEEEEEEESEEEEEEECSS
T ss_pred CCcccccccccceEEcCCcEEEEecccCCcchhcccccceEEEEEEecCCceeeeee-CCCCeEEEEEEeeEEEEEEecC
Confidence 455554 44488999999999996533 4677773 6999999999999999995 7999999999999999999997
Q ss_pred CCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCC-CCcEEEEEEeecCCCC---cccccccc
Q 039441 399 SSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASP-NEKLLTVGFSLNARNN---QRNFLAGK 474 (539)
Q Consensus 399 gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~g-ne~l~~v~F~~na~n~---~~~fLAG~ 474 (539)
+ ..+.+|++||||+||+|.+||++|.+ ++.|.+++|.++++++ ..++|||.
T Consensus 84 ~-------------------------~~~~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~ 138 (418)
T 3s7i_A 84 N-------------------------RKSFNLDEGHALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASS 138 (418)
T ss_dssp C-------------------------EEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCC
T ss_pred C-------------------------EEEEEecCCCEEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCC
Confidence 5 45689999999999999999999975 4679999887665444 45678987
Q ss_pred c---hhcccCcHHHHHHHcCCCHHHHHHhhcC
Q 039441 475 I---NIMNQVERETMEVAFNVPARLIERVFGT 503 (539)
Q Consensus 475 ~---svL~~~p~evLa~AF~vs~e~v~kL~~~ 503 (539)
. +||++||.+||++||+++.++|++|+..
T Consensus 139 ~~~~s~~~gf~~evLa~af~v~~~~v~kl~~~ 170 (418)
T 3s7i_A 139 RDQSSYLQGFSRNTLEAAFNAEFNEIRRVLLE 170 (418)
T ss_dssp SSCCCGGGGSCHHHHHHHHTSCHHHHHHHTTS
T ss_pred cchhHHhhcCCHHHHHHHHCcCHHHHHhhhcc
Confidence 4 7999999999999999999999999954
No 28
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.92 E-value=1.1e-24 Score=233.17 Aligned_cols=169 Identities=24% Similarity=0.390 Sum_probs=140.1
Q ss_pred cceecCC---CCCcccCCCceEEEeCC--cccccccccc-eeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecC
Q 039441 324 APFNLLS---RKPIYNNNFGRFFEATP--KDYQQLQEID-AGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGP 397 (539)
Q Consensus 324 ~~fnl~~---~~p~~sn~~G~i~~~~~--~~fP~L~~l~-isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p 397 (539)
.||.+.. ..+.+.+.+|++..++. .++|.|.+++ +++++++|.|||+++|| |++|++|+||++|+|+++++++
T Consensus 21 ~p~~f~~~~~~~~~~~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~~ 99 (434)
T 2ea7_A 21 NPFYFNSDRWFRTLYRNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVNP 99 (434)
T ss_dssp CTTEECTTTSEEEEEEETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS
T ss_pred CCeEEeccccccceEEcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEeC
Confidence 3455544 44888899999999743 5678999987 99999999999999999 6799999999999999999998
Q ss_pred CCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCC-CCcEEEEEEeecCCCC---ccccccc
Q 039441 398 LSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASP-NEKLLTVGFSLNARNN---QRNFLAG 473 (539)
Q Consensus 398 ~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~g-ne~l~~v~F~~na~n~---~~~fLAG 473 (539)
++ ..+..|++|||++||+|.+||++|++ +++|.+|++...++++ ..++|+|
T Consensus 100 ~~-------------------------~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g 154 (434)
T 2ea7_A 100 DS-------------------------RDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSS 154 (434)
T ss_dssp SC-------------------------EEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSC
T ss_pred CC-------------------------CEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecC
Confidence 64 35678999999999999999999998 7899999987554343 3457888
Q ss_pred c---chhcccCcHHHHHHHcCCCHHHHHHhh-cCCC---------CceeEecCChhhh
Q 039441 474 K---INIMNQVERETMEVAFNVPARLIERVF-GTNP---------KESYFVAGPEEQQ 518 (539)
Q Consensus 474 ~---~svL~~~p~evLa~AF~vs~e~v~kL~-~~q~---------e~~~fv~~p~~~~ 518 (539)
+ .+||++||++||++||+++.++|++|+ ..++ ..++||+.+..++
T Consensus 155 ~~~~~~~~~~~~~~vLa~af~v~~~~v~~l~~~~~~~~~~~~~~q~~g~Iv~~~~~~~ 212 (434)
T 2ea7_A 155 TEAQQSYLRGFSKNILEASFDSDFKEINRVLFGEERQQQQGEESREEGVIVELKREQI 212 (434)
T ss_dssp CSSCCCGGGGSCHHHHHHHHTSCHHHHHHHHTCC---------CCCSSSEEECCHHHH
T ss_pred CcchhhhhhcCCHHHHHHHhCCCHHHHHhhhhcccccccccccccccceEEECCcccC
Confidence 6 369999999999999999999999999 5432 2249999876654
No 29
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.91 E-value=4.2e-24 Score=229.12 Aligned_cols=170 Identities=21% Similarity=0.338 Sum_probs=140.4
Q ss_pred CcceecCCCCCcccCCCceEEEeCC--cccccccccc-eeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCC
Q 039441 323 TAPFNLLSRKPIYNNNFGRFFEATP--KDYQQLQEID-AGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLS 399 (539)
Q Consensus 323 ~~~fnl~~~~p~~sn~~G~i~~~~~--~~fP~L~~l~-isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~g 399 (539)
++.|...+..+.+.+.+|++..++. .++|.|++++ +++++++|.|||++.|| |+++++|+||++|+|+++++.+++
T Consensus 48 p~vf~~~~~~~~i~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~~~~ 126 (445)
T 2cav_A 48 PYLFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNPDG 126 (445)
T ss_dssp TTEECGGGEEEEEEETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEETTE
T ss_pred CeEEchhhcCceEEcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEeCCC
Confidence 3445544544567788999999765 3456888887 99999999999999999 569999999999999999999864
Q ss_pred CccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCC-CCcEEEEEEeecCCCC---ccccccccc
Q 039441 400 SRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASP-NEKLLTVGFSLNARNN---QRNFLAGKI 475 (539)
Q Consensus 400 s~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~g-ne~l~~v~F~~na~n~---~~~fLAG~~ 475 (539)
..+..|++|||++||+|.+||++|++ +++|.+|++.+.++++ ..++|||..
T Consensus 127 -------------------------~~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~ 181 (445)
T 2cav_A 127 -------------------------RDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTK 181 (445)
T ss_dssp -------------------------EEEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCS
T ss_pred -------------------------CEEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCC
Confidence 25678999999999999999999998 7899999877655444 245789873
Q ss_pred ---hhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeEecCChhhh
Q 039441 476 ---NIMNQVERETMEVAFNVPARLIERVFGTNPKESYFVAGPEEQQ 518 (539)
Q Consensus 476 ---svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~fv~~p~~~~ 518 (539)
+||++||++||++||+++.+++++|+..+++.++||+.+..++
T Consensus 182 ~~~~~~~~~~~~vLa~af~v~~~~v~~l~~~~~~~g~Iv~~~~~~~ 227 (445)
T 2cav_A 182 RLPSYLSAFSKNFLEASYDSPYDEIEQTLLQEEQEGVIVKMPKDQI 227 (445)
T ss_dssp SCCCGGGGSCHHHHHHHHTSCHHHHHHHTTSCCSSSSEEECCCC--
T ss_pred chhhhhhcCCHHHHHHHhCCCHHHHHhhhcccCCCCcEEEeCCcch
Confidence 8999999999999999999999999965543358998886543
No 30
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.91 E-value=4.9e-24 Score=226.90 Aligned_cols=170 Identities=22% Similarity=0.356 Sum_probs=140.5
Q ss_pred cceecC---CCCCcccCCCceEEEeCC--cccccccccc-eeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecC
Q 039441 324 APFNLL---SRKPIYNNNFGRFFEATP--KDYQQLQEID-AGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGP 397 (539)
Q Consensus 324 ~~fnl~---~~~p~~sn~~G~i~~~~~--~~fP~L~~l~-isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p 397 (539)
.||.+. +..+.+.+.+|++..++. .+.+.|.+++ +++++++|.||++++|| |++|++|+||++|+|++++|++
T Consensus 9 ~p~~f~~~~~~~~~~~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~~ 87 (416)
T 1uij_A 9 NPFYFRSSNSFQTLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVNN 87 (416)
T ss_dssp CTTEECGGGSEEEEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEECS
T ss_pred CCeEecccccccceEEcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEEC
Confidence 455444 445678899999999754 4458899987 99999999999999999 5699999999999999999998
Q ss_pred CCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcC-CCCcEEEEEEeecCCCC---ccccccc
Q 039441 398 LSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVAS-PNEKLLTVGFSLNARNN---QRNFLAG 473 (539)
Q Consensus 398 ~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~-gne~l~~v~F~~na~n~---~~~fLAG 473 (539)
++ ..+..|++|||++||+|.+||++|+ ++++|++|++...++++ ..++|+|
T Consensus 88 ~~-------------------------~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g 142 (416)
T 1uij_A 88 DD-------------------------RDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSS 142 (416)
T ss_dssp SC-------------------------EEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSC
T ss_pred CC-------------------------CeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecC
Confidence 53 4567899999999999999999999 49999999987644332 3457888
Q ss_pred cc---hhcccCcHHHHHHHcCCCHHHHHHhh-cCCC----CceeEecCChhhhh
Q 039441 474 KI---NIMNQVERETMEVAFNVPARLIERVF-GTNP----KESYFVAGPEEQQQ 519 (539)
Q Consensus 474 ~~---svL~~~p~evLa~AF~vs~e~v~kL~-~~q~----e~~~fv~~p~~~~~ 519 (539)
.. +||++||++||++||+++.+++++|+ ..++ ..++||+.+..+++
T Consensus 143 ~~~~~~~~~~~~~~vLa~af~v~~~~v~~l~~~~~~~~~~~~g~Iv~~~~~~~~ 196 (416)
T 1uij_A 143 TQAQQSYLQGFSHNILETSFHSEFEEINRVLFGEEEEQRQQEGVIVELSKEQIR 196 (416)
T ss_dssp BSSCCCGGGGSCHHHHHHHHTSCHHHHHHHHTCTTCGGGSBSSSEEECCHHHHH
T ss_pred CcccchhhhcCCHHHHHHHhCcCHHHHHhhhhccccccccCcceEEEeCCcccc
Confidence 64 69999999999999999999999999 6552 23589998765544
No 31
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.90 E-value=4e-23 Score=198.82 Aligned_cols=155 Identities=19% Similarity=0.246 Sum_probs=135.8
Q ss_pred CCcceec-CCCCCcccCCCce-EEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCC-
Q 039441 322 STAPFNL-LSRKPIYNNNFGR-FFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPL- 398 (539)
Q Consensus 322 ~~~~fnl-~~~~p~~sn~~G~-i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~- 398 (539)
..+.|++ +.+++.++|..|. ++.++..++|.|.++++++.++.|.||++..||||+++++|+||++|+++++++++.
T Consensus 34 ~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~ 113 (201)
T 1fi2_A 34 DDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLD 113 (201)
T ss_dssp SCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGG
T ss_pred cceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCC
Confidence 4567887 7777776766555 899999999999999999999999999999999999999999999999999999764
Q ss_pred --CCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecCCCCccccccccch
Q 039441 399 --SSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNARNNQRNFLAGKIN 476 (539)
Q Consensus 399 --gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na~n~~~~fLAG~~s 476 (539)
+ ++++..|++||+++||+|.+|++.|.+++++.++++.... ++....++ .+
T Consensus 114 ~~~------------------------~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~-~p~~~~~~--~~ 166 (201)
T 1fi2_A 114 SGN------------------------KLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQ-NPGIVFVP--LT 166 (201)
T ss_dssp GTT------------------------CEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSS-CCCCEEHH--HH
T ss_pred CCC------------------------eEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCC-CCCeEehh--hH
Confidence 2 4567899999999999999999999999999999887655 66666665 46
Q ss_pred hccc---CcHHHHHHHcCCCHHHHHHhhcC
Q 039441 477 IMNQ---VERETMEVAFNVPARLIERVFGT 503 (539)
Q Consensus 477 vL~~---~p~evLa~AF~vs~e~v~kL~~~ 503 (539)
+|.. ||++||+++|+++.++|++|++.
T Consensus 167 ~~~~~~~~~~~vl~~af~~~~~~v~~l~~~ 196 (201)
T 1fi2_A 167 LFGSDPPIPTPVLTKALRVEAGVVELLKSK 196 (201)
T ss_dssp HHHCSSCCCHHHHHHHHTSCHHHHHHHHHH
T ss_pred HhcCCCCCCHHHHHHHHCcCHHHHHHHHHh
Confidence 8876 99999999999999999999864
No 32
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=99.87 E-value=6.5e-22 Score=169.29 Aligned_cols=89 Identities=38% Similarity=0.687 Sum_probs=85.2
Q ss_pred ceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecCCCCccccccc-cchhcccCcHHHHHHHcCCCHHHHHHh
Q 039441 422 ELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNARNNQRNFLAG-KINIMNQVERETMEVAFNVPARLIERV 500 (539)
Q Consensus 422 ~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na~n~~~~fLAG-~~svL~~~p~evLa~AF~vs~e~v~kL 500 (539)
+|++++.+|++|||||||+|||++++|+. +|+||+|.||+++|+++|||| ++|+|++||.+||++||+++.+++++|
T Consensus 2 ~~~~~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~~l~~evla~aF~~s~ee~~~l 79 (93)
T 1dgw_Y 2 QLRRYAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIRQIPRQVSDLTFPGSGEEVEEL 79 (93)
T ss_dssp CEEEEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTTTSCHHHHHHHSSSCTHHHHHH
T ss_pred ccchhhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHHhCCHHHHHHHcCCCHHHHHHH
Confidence 58999999999999999999999999984 499999999999999999999 999999999999999999999999999
Q ss_pred hcCCCCceeEecC
Q 039441 501 FGTNPKESYFVAG 513 (539)
Q Consensus 501 ~~~q~e~~~fv~~ 513 (539)
+.+|+++ +|+++
T Consensus 80 ~~~q~e~-~~~~~ 91 (93)
T 1dgw_Y 80 LENQKES-YFVDG 91 (93)
T ss_dssp TTSCCCC-SEECC
T ss_pred HhcCCCc-eeccC
Confidence 9999887 89987
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.86 E-value=3.3e-22 Score=166.51 Aligned_cols=76 Identities=45% Similarity=0.844 Sum_probs=73.9
Q ss_pred cceecCCCCCcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCC
Q 039441 324 APFNLLSRKPIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLS 399 (539)
Q Consensus 324 ~~fnl~~~~p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~g 399 (539)
.||||++++|+|+|.+|+++++++.+||+|++++||+++++|.||||++|||||+|++|+||++|+++++||++++
T Consensus 2 ~pfnl~~~~p~~~n~~G~~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~g 77 (79)
T 1dgw_X 2 KPFNLRSRDPIYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQ 77 (79)
T ss_dssp CCEETTSSCCSEECSSEEEEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC-
T ss_pred CccccccCCCCccCCCCcEEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCCC
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999986
No 34
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.85 E-value=1.7e-20 Score=195.66 Aligned_cols=260 Identities=16% Similarity=0.142 Sum_probs=163.0
Q ss_pred cCCCceeecCccceeEec-------CCceEEEeeccCcccccccC-cceeeEEEeeeCCCeeecccccCCCcEEEEEece
Q 039441 160 ENNPYYFHSQRFRYRVRS-------DSGHMRVLQRFSQKSHLLRG-IDNYRLAILEANPSTLVVPHHSDAETILVLLKGK 231 (539)
Q Consensus 160 ~~~py~f~~~~f~~~v~s-------e~G~i~vl~~f~~~s~~l~g-v~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~ 231 (539)
...|++|.=...+..+.. ++...++|...+....-... ...+.+.++++.|++...||+++..+|+||++|+
T Consensus 51 ~~~p~~~~~~~~~~~l~~~~~~~~~~~~~rr~l~~~np~~~g~~~~~~~l~~~~~~l~PG~~~~~H~H~~~e~~yVl~G~ 130 (354)
T 2d40_A 51 NCAPAYWNYQEIRPLLLESGGLIGAKEAVRRVLVLENPALRGQSSITATLYAGLQLIMPGEVAPSHRHNQSALRFIVEGK 130 (354)
T ss_dssp CSCCEEECSTTTCCCC-----------------EECCSSCTTSCCSSSSCEEEEEEECTTCEEEEEEESSCEEEEEEECS
T ss_pred CCcCceeCHHHHHHHHHHhhhccCcCCCCEEEEEecCCCcCCccccCCcEEEEEEEECCCCCcCCeecCcceEEEEEEEE
Confidence 456788876655444433 22233333332322110011 2356677888899999999999999999999999
Q ss_pred EEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCC---CCCCceeccccCccE-EEcChhh-hh
Q 039441 232 GVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVN---TPGQFRVQQRQQGTI-KRASQEQ-LK 306 (539)
Q Consensus 232 g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n---~pg~f~~~~q~~G~I-vrv~~eq-l~ 306 (539)
|.++.|.. +.+.|++||+|+||+|++|++.|.+ +++++++.+.+..- ....|...- +..+. ...+..+ .+
T Consensus 131 g~~t~v~g---~~~~l~~GD~~~iP~g~~H~~~n~~-~~~~~~l~v~d~p~~~~l~~~~~~~~-~~~~~~~~~p~~~~~~ 205 (354)
T 2d40_A 131 GAFTAVDG---ERTPMNEGDFILTPQWRWHDHGNPG-DEPVIWLDGLDLPLVNILGCGFAEDY-PEEQQPVTRKEGDYLP 205 (354)
T ss_dssp SCEEEETT---EEEECCTTCEEEECTTSCEEEECCS-SSCEEEEEEECHHHHHHHTCCCEEEC-C--CCCCCSCTTTHHH
T ss_pred EEEEEECC---EEEEEcCCCEEEECCCCcEEeEeCC-CCCEEEEEEECchhHhhcCceeeecC-ccccCcCcCCcchhhh
Confidence 99977754 5899999999999999999999998 57788888776421 011121100 00000 0001111 00
Q ss_pred h----cCccccccCCCCCCCC-cceecCC-----------CCCcccCCCceEEEeCCc-ccccccccceeEEEEEEcCCc
Q 039441 307 A----LSHHASSRRRHGRGST-APFNLLS-----------RKPIYNNNFGRFFEATPK-DYQQLQEIDAGVTYVEINQGG 369 (539)
Q Consensus 307 ~----l~~~~~~~~~~~~~~~-~~fnl~~-----------~~p~~sn~~G~i~~~~~~-~fP~L~~l~isva~v~L~pGg 369 (539)
. +.|.. ......++ ..|.... ..+. ...++.+..+++. .++++.. |++..+.|.||+
T Consensus 206 ~~~~~~~p~~---~~~~~~sp~~~y~~~~~~~~l~~~~~~~~~~-~~~G~~~~~~np~t~~~~~~t--i~~~~~~l~pG~ 279 (354)
T 2d40_A 206 RYAANMLPLR---HQTGNSSPIFNYRYDRSREVLHDLTRLGDAD-EWDGYKMRYVNPVTGGYPMPS--MGAFLQLLPKGF 279 (354)
T ss_dssp HHSSSEECSS---CCCCSSCSCCEECHHHHHHHHHHHHTTSCCB-TTTBEEEEECCTTTSSCSSSS--CEEEEEEECTTC
T ss_pred hhccCCCCcc---ccccCCCcceeccHHHHHHHHHhhhhccccC-CCCCeEEEEeCCCcCCCCCCc--ceeEEEEECCCC
Confidence 0 01100 00000011 2232211 1111 1235567777754 5777765 778889999999
Q ss_pred eecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcC
Q 039441 370 MMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVAS 449 (539)
Q Consensus 370 m~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~ 449 (539)
+..||||+++ +|.||++|+|+++| ++ .+.++++||+|+||++++|++.|+
T Consensus 280 ~~~~H~h~~~-ev~~v~~G~g~~~v---~~--------------------------~~~~~~~GD~~~vP~~~~H~~~n~ 329 (354)
T 2d40_A 280 ASRVARTTDS-TIYHVVEGSGQVII---GN--------------------------ETFSFSAKDIFVVPTWHGVSFQTT 329 (354)
T ss_dssp BCCCBEESSC-EEEEEEEEEEEEEE---TT--------------------------EEEEEETTCEEEECTTCCEEEEEE
T ss_pred CCCceecCCc-EEEEEEeCeEEEEE---CC--------------------------EEEEEcCCCEEEECCCCeEEEEeC
Confidence 9999999887 99999999999999 32 236899999999999999999995
Q ss_pred CCCcEEEEEEeec
Q 039441 450 PNEKLLTVGFSLN 462 (539)
Q Consensus 450 gne~l~~v~F~~n 462 (539)
+++.+++|.+.
T Consensus 330 --e~~~l~~~~d~ 340 (354)
T 2d40_A 330 --QDSVLFSFSDR 340 (354)
T ss_dssp --EEEEEEEEESH
T ss_pred --CCEEEEEEcCH
Confidence 67888887543
No 35
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.83 E-value=8.5e-20 Score=188.85 Aligned_cols=154 Identities=11% Similarity=0.136 Sum_probs=130.2
Q ss_pred CcceecCCCCCcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCcc
Q 039441 323 TAPFNLLSRKPIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRW 402 (539)
Q Consensus 323 ~~~fnl~~~~p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~ 402 (539)
...|++.+..+. .+.+|++..++..+||.+.. +++..+.|.||+++.||||+++.+|+||++|+++++|+++++.
T Consensus 20 ~~~~~~~~~~~~-~~~~G~~~~~~~~~~p~~~~--~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~-- 94 (361)
T 2vqa_A 20 AFTYAFSKTPLV-LYDGGTTKQVGTYNFPVSKG--MAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGK-- 94 (361)
T ss_dssp CSEECGGGSCCE-EETTEEEEEESTTTCTTCCS--CEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSC--
T ss_pred ceEEEcccCCce-ecCCceEEEeChhhCccccc--eeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCc--
Confidence 467788777664 55899999999999999875 7999999999999999999889999999999999999998752
Q ss_pred chhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecCCCCccccccccchhcccCc
Q 039441 403 SQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNARNNQRNFLAGKINIMNQVE 482 (539)
Q Consensus 403 s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na~n~~~~fLAG~~svL~~~p 482 (539)
.....|++||+++||+|.+|++.|.+++++.++.+++.+ +...+...+..+||+++|
T Consensus 95 ----------------------~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~-~~~~~~~~~~~~~~~~~p 151 (361)
T 2vqa_A 95 ----------------------VEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDG-TFSEGATFSVTDWLSHTP 151 (361)
T ss_dssp ----------------------EEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESST-TCCTTSSEEHHHHHHTSC
T ss_pred ----------------------EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCC-CccccceecHhHHHHhCC
Confidence 234789999999999999999999988999999877665 222111112379999999
Q ss_pred HHHHHHHcCCCHHHHHHhhcCC
Q 039441 483 RETMEVAFNVPARLIERVFGTN 504 (539)
Q Consensus 483 ~evLa~AF~vs~e~v~kL~~~q 504 (539)
.++|+++|+++.+.+++|...+
T Consensus 152 ~~vLa~~~~v~~~~~~~l~~~~ 173 (361)
T 2vqa_A 152 IAWVEENLGWTAAQVAQLPKKQ 173 (361)
T ss_dssp HHHHHHHHTCCHHHHTTSCSSC
T ss_pred HHHHHHHhCcCHHHHHhccccC
Confidence 9999999999999999998654
No 36
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.81 E-value=6.8e-18 Score=171.96 Aligned_cols=257 Identities=18% Similarity=0.185 Sum_probs=157.3
Q ss_pred cCCCceeecCccceeEecCCceEEEeeccCcccccccCcceeeEEEeeeCCCeeecccccC-CCcEEEEEeceEEEEEEe
Q 039441 160 ENNPYYFHSQRFRYRVRSDSGHMRVLQRFSQKSHLLRGIDNYRLAILEANPSTLVVPHHSD-AETILVLLKGKGVITLVS 238 (539)
Q Consensus 160 ~~~py~f~~~~f~~~v~se~G~i~vl~~f~~~s~~l~gv~~~Rl~il~l~P~~l~lPh~~d-A~~~~yV~~G~g~i~~v~ 238 (539)
...|||+.......+. ..+..+++|-. . ...-..+.+.++++.|++...+|||. +.+++||++|++.+++
T Consensus 12 ~~~~~v~r~~~~~~~~-~~g~~~~~l~~--~----~~~~~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~-- 82 (337)
T 1y3t_A 12 EKMPYLLRSGEGERYL-FGRQVATVMAN--G----RSTGDLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL-- 82 (337)
T ss_dssp SSCCEEECTTCSEEEE-ETTEEEEEEEC--H----HHHTSSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE--
T ss_pred CCCCEEecCCCccEEE-ECCeEEEEEee--c----CCCCCeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE--
Confidence 4568998877765433 34455554321 0 00113667778888999998889888 9999999999999986
Q ss_pred CCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCCCCcee-ccccCccEE------EcChhhhhh----
Q 039441 239 HERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPGQFRV-QQRQQGTIK------RASQEQLKA---- 307 (539)
Q Consensus 239 pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg~f~~-~~q~~G~Iv------rv~~eql~~---- 307 (539)
...++.|++||+|+||+|++|.+.|.++ .++++.++.+.....-|.. +....+... ..+.+.+..
T Consensus 83 --~~~~~~l~~Gd~~~~p~~~~H~~~n~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~l~~~a~~ 158 (337)
T 1y3t_A 83 --DGERYLLISGDYANIPAGTPHSYRMQSH--RTRLVSYTMKGNVAHLYSVIGNPYDHAEHPPYASEEVSNERFAEAAAV 158 (337)
T ss_dssp --TTEEEEECTTCEEEECTTCCEEEEECST--TEEEEEEEETTSSTHHHHHHSEECSCSSCCSSCCCCCTTCTTGGGTSS
T ss_pred --CCEEEEECCCCEEEECCCCcEEEEECCC--CeEEEEEECCCCHHHHHHHhCcccccccCCCCCCcccCHHHHHHhHhh
Confidence 2367999999999999999999999974 4778887776532111111 100000000 000000100
Q ss_pred -----cCc---cccc-cCC--CCCCCCcceecCC-CCCcccCCCceEEEeCCcccccccccceeEEEEEEcC-Cceecce
Q 039441 308 -----LSH---HASS-RRR--HGRGSTAPFNLLS-RKPIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQ-GGMMVPH 374 (539)
Q Consensus 308 -----l~~---~~~~-~~~--~~~~~~~~fnl~~-~~p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~p-Ggm~~PH 374 (539)
+.+ ...+ .|. .......+|.+.. ..+.+...+..+..+.+. ......+ +..+.+.| |+...+|
T Consensus 159 ~gv~~~~~~~~~~~~~~~~~~~l~~~~~~~v~r~~~~~~~~~~g~~~~~l~~~---~~~~~~~-~~~~~~~p~g~~~~~h 234 (337)
T 1y3t_A 159 ATIVFLDEAKPACSAKLAELTELPDGAVPYVLESGEGDRLLTGDQLHRIVAAQ---KNTDGQF-IVVSSEGPKGDRIVDH 234 (337)
T ss_dssp CEECCCCCCCSSCSCEECCBCSCCSSSCCEEECTTCSEEEEETTEEEEEEECG---GGTTTSC-EEEEEEECSCCCCCCE
T ss_pred ccEEEcCCCCccccccchhhhcCCCCCCCEEECCCCcCEEEECCcEEEEEecc---cccCCcE-EEEEEEcCCCCCCCCc
Confidence 000 0000 000 0011122333332 222333333334444321 1122223 44556666 6777899
Q ss_pred ecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcE
Q 039441 375 YNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKL 454 (539)
Q Consensus 375 whpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l 454 (539)
||+.+.+++||++|++.+.+ ++ + +..|++||+++||++.+|++.|.++ ++
T Consensus 235 ~H~~~~e~~~vl~G~~~~~i---~~------------------------~--~~~l~~GD~~~ip~~~~H~~~n~~~-~~ 284 (337)
T 1y3t_A 235 YHEYHTETFYCLEGQMTMWT---DG------------------------Q--EIQLNPGDFLHVPANTVHSYRLDSH-YT 284 (337)
T ss_dssp ECSSCEEEEEEEESCEEEEE---TT------------------------E--EEEECTTCEEEECTTCCEEEEECSS-SE
T ss_pred CCCCCcEEEEEEeCEEEEEE---CC------------------------E--EEEECCCCEEEECCCCeEEEEECCC-Ce
Confidence 99889999999999999987 22 1 2579999999999999999999987 88
Q ss_pred EEEEEeecC
Q 039441 455 LTVGFSLNA 463 (539)
Q Consensus 455 ~~v~F~~na 463 (539)
.++.+.+.+
T Consensus 285 ~~l~v~~~~ 293 (337)
T 1y3t_A 285 KMVGVLVPG 293 (337)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEcCc
Confidence 888876444
No 37
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.75 E-value=6.9e-17 Score=160.81 Aligned_cols=191 Identities=11% Similarity=0.073 Sum_probs=132.2
Q ss_pred eeEEEeeeCCCeeeccc-c-cCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 201 YRLAILEANPSTLVVPH-H-SDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 201 ~Rl~il~l~P~~l~lPh-~-~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
+-+.++++.|++-..++ | ..+.+++||++|++.+++ +.+++.|++||.++||+|++|++.|.+ +++++++.+.
T Consensus 59 ~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~----~~~~~~L~~Gd~~~~~~~~~H~~~N~~-~~~~~~l~v~ 133 (261)
T 1rc6_A 59 FVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKA----EGKTFALSEGGYLYCPPGSLMTFVNAQ-AEDSQIFLYK 133 (261)
T ss_dssp SEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEE----TTEEEEEETTEEEEECTTCCCEEEECS-SSCEEEEEEE
T ss_pred EEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEE----CCEEEEECCCCEEEECCCCCEEEEeCC-CCCEEEEEEE
Confidence 34556677999877654 3 357899999999999987 346899999999999999999999998 5778877766
Q ss_pred ccCCC-CCCceeccccCccEEEcChhhhhhcCccccccCCCCCCCCcceecCCCCCcccC-CCc-eEEEeCCcccccccc
Q 039441 279 QPVNT-PGQFRVQQRQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPFNLLSRKPIYNN-NFG-RFFEATPKDYQQLQE 355 (539)
Q Consensus 279 d~~n~-pg~f~~~~q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fnl~~~~p~~sn-~~G-~i~~~~~~~fP~L~~ 355 (539)
..... +|. .+.-.|+ +..+-.+.... .+| .+..+.+.+ ..
T Consensus 134 ~~~~~~~g~-----~p~~~v~----------------------------~~~~~~~~~~~~~~~~~~~~l~~~~----~~ 176 (261)
T 1rc6_A 134 RRYVPVEGY-----APWLVSG----------------------------NASELERIHYEGMDDVILLDFLPKE----LG 176 (261)
T ss_dssp EECCCCTTC-----CCCCEEE----------------------------EGGGSCCC-------CEEEECSCCS----TT
T ss_pred eccccCCCC-----CCceEEc----------------------------CHHHCCcccCCCCcceEEEEecCcc----cC
Confidence 43211 110 0111111 11111111111 122 223333221 13
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
.++.+..+.|.||+...+|||+...+++||++|++.+.+= + +. ..|++||+
T Consensus 177 ~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~---~------------------------~~--~~l~~GD~ 227 (261)
T 1rc6_A 177 FDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLD---N------------------------NW--IPVKKGDY 227 (261)
T ss_dssp CSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESS---S------------------------CE--EEEETTCE
T ss_pred CceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEEC---C------------------------EE--EEeCCCCE
Confidence 4688999999999999999998889999999999998752 1 12 57999999
Q ss_pred EEeCCCCeEEEEcCCC-CcEEEEEEeec
Q 039441 436 FIIPPGHPIALVASPN-EKLLTVGFSLN 462 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gn-e~l~~v~F~~n 462 (539)
++||+|.+|++.|.++ +++.++.+.+.
T Consensus 228 i~~~~~~~H~~~n~g~~~~~~~l~~~d~ 255 (261)
T 1rc6_A 228 IFMGAYSLQAGYGVGRGEAFSYIYSKDC 255 (261)
T ss_dssp EEECSSEEEEEEEC----CEEEEEEEEC
T ss_pred EEECCCCcEEeEeCCCCcCEEEEEEecC
Confidence 9999999999999988 99999987654
No 38
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.73 E-value=7.6e-16 Score=160.19 Aligned_cols=221 Identities=19% Similarity=0.171 Sum_probs=144.4
Q ss_pred eeCCCeeec---ccccC-CCcEEEEEeceEEEEEEe-CCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccC
Q 039441 207 EANPSTLVV---PHHSD-AETILVLLKGKGVITLVS-HERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPV 281 (539)
Q Consensus 207 ~l~P~~l~l---Ph~~d-A~~~~yV~~G~g~i~~v~-pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~ 281 (539)
.+.|++... ||||. ..+++||++|++.+.+=. ++...++.|++||+++||+|++|++.|.++ .. +++.++.+.
T Consensus 53 ~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~-~~-~~l~v~~p~ 130 (350)
T 1juh_A 53 TNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDP-DT-EMTGVIVPG 130 (350)
T ss_dssp EEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECST-TE-EEEEEEESS
T ss_pred EEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCC-CC-EEEEEEcCc
Confidence 346777665 78776 999999999999998877 455579999999999999999999999985 44 667766654
Q ss_pred CCCCCcee-ccc-------------------------------cCccEEEcChhhhhhcC-ccccccCCCCCCCCccee-
Q 039441 282 NTPGQFRV-QQR-------------------------------QQGTIKRASQEQLKALS-HHASSRRRHGRGSTAPFN- 327 (539)
Q Consensus 282 n~pg~f~~-~~q-------------------------------~~G~Ivrv~~eql~~l~-~~~~~~~~~~~~~~~~fn- 327 (539)
....-|.. +.. .-|+++..+..+++.|. ..+.+ .......+++
T Consensus 131 ~~~~~f~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~a~~---~~~w~~~~~~~ 207 (350)
T 1juh_A 131 GFEDLFYYLGTNATDTTHTPYIPSSSDSSSTTGPDSSTISTLQSFDVYAELSFTPRTDTVNGTAPA---NTVWHTGANAL 207 (350)
T ss_dssp CTTHHHHHHSEECCCTTCCSSCCC--------------CGGGGGGTCEECTTCCCCCCCBTTEESS---SSCSSSSCCCC
T ss_pred cHHHHHHHhccccccccccccCCcccccCccccCHHHHHHHHHHcCCEeccccCChhHhhcccccc---CCccccCcccc
Confidence 32111110 110 11122111111111111 00000 1122345777
Q ss_pred cC-CCCCcc-cCCCceEEE---------eCCcccccccccceeEEEEEEcCC--ceecceecCCCCEEEEEEeceEEEEE
Q 039441 328 LL-SRKPIY-NNNFGRFFE---------ATPKDYQQLQEIDAGVTYVEINQG--GMMVPHYNSKATTIVLVVEGRGRFEM 394 (539)
Q Consensus 328 l~-~~~p~~-sn~~G~i~~---------~~~~~fP~L~~l~isva~v~L~pG--gm~~PHwhpnA~ei~yV~~G~g~v~v 394 (539)
|. +.+|.| .++.|..+. ..-...+.++...+++..+.+.++ |...|+|+...++++||++|++.++|
T Consensus 208 l~~~~~p~~~~~~~g~~~~~~~~g~v~~~~l~~~~~~~~~~f~~~~i~~~~~~~g~~~~~h~~~~~~~~~vleG~~~i~i 287 (350)
T 1juh_A 208 ASTAGDPYFIANGWGPKYLNSQYGYQIVAPFVTATQAQDTNYTLSTISMSTTPSTVTVPTWSFPGACAFQVQEGRVVVQI 287 (350)
T ss_dssp CSSTTCCEEECTTCSCEEEECTTSCEEEEEEECHHHHGGGCEEEEEEEECCCCTTSCCCCBCCSSCEEEEEEESCEEEEE
T ss_pred cCCCCCceEECCCccchhhcccCCcEEEEEEEeCCcCceeEEEEEEEeeccccCCCCCCcccCCCcEEEEEEeeEEEEEE
Confidence 54 566777 666665332 011112344555688999999884 55677776799999999999999999
Q ss_pred ecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEee
Q 039441 395 GGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSL 461 (539)
Q Consensus 395 V~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~ 461 (539)
-... ...|++||+++||+|.+|.+.|.++. ..++.+..
T Consensus 288 ~g~~----------------------------~~~l~~Gd~~~iPag~~h~~~~~~~~-~~~l~~~~ 325 (350)
T 1juh_A 288 GDYA----------------------------ATELGSGDVAFIPGGVEFKYYSEAYF-SKVLFVSS 325 (350)
T ss_dssp TTSC----------------------------CEEECTTCEEEECTTCCEEEEESSSS-EEEEEEEE
T ss_pred CCeE----------------------------EEEeCCCCEEEECCCCCEEEEecCCe-EEEEEEec
Confidence 7631 15799999999999999999998553 66666554
No 39
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.71 E-value=1.2e-15 Score=161.11 Aligned_cols=266 Identities=14% Similarity=0.130 Sum_probs=165.6
Q ss_pred ccCCCceeecCccce-------eEecCCceEEEeeccCcccccccCc-ceeeEEEeeeCCCeeecccccCCCcEEEEEec
Q 039441 159 EENNPYYFHSQRFRY-------RVRSDSGHMRVLQRFSQKSHLLRGI-DNYRLAILEANPSTLVVPHHSDAETILVLLKG 230 (539)
Q Consensus 159 ~~~~py~f~~~~f~~-------~v~se~G~i~vl~~f~~~s~~l~gv-~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G 230 (539)
..--|++++-...+. .+..+.|.-++|...+........+ ..+-..+..+.|+...-+|.+.+.++.||++|
T Consensus 73 ~~~~p~~w~~~~~~~~l~~~~~~~~~~~~~RR~~~L~nP~~~~~~~~t~~L~a~~~~l~PG~~~~~HrH~~~ev~~IleG 152 (394)
T 3bu7_A 73 PKSAPVHWKWSDLRREVLRAIDLVRPEDAGRRVVYLRNPQRKDVSAACGWLFSGIQTMKAGERAGAHRHAASALRFIMEG 152 (394)
T ss_dssp CSSCCCEECHHHHHHHHHHHHHHSCSSCSSCCCEECCCGGGGGGTCSBTTBEEEEEEECTTCBCCCEEESSCEEEEEEEC
T ss_pred CCcccceecHHHHHHHHHHhhcccCcccCceEEEEEeCCcccCcCccCCeeEEEEEEECCCCCcCCccCCcceEEEEEEe
Confidence 445688888666554 3455666666666666543222221 23444666779999999998888899999999
Q ss_pred eEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEe-cCCCceEEEEEEeccC--C-CCCCcee-ccccCccEEEcChhh-
Q 039441 231 KGVITLVSHERRESFNMEHGDVISVPAGTTYYLSN-QDNVDRLHVAKLLQPV--N-TPGQFRV-QQRQQGTIKRASQEQ- 304 (539)
Q Consensus 231 ~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N-~g~~e~L~iv~l~d~~--n-~pg~f~~-~~q~~G~Ivrv~~eq- 304 (539)
+|..+.|+ .+.+.+++||+|++|+|..|++.| +| +++|+++.++|-. + ..-.|.. ...+...+ ..+...
T Consensus 153 ~G~~t~v~---G~~~~~~~GD~i~~P~g~~H~~~N~~g-de~l~~l~v~d~Pl~~~l~~~f~e~~~~~~~~~-~~~~~~~ 227 (394)
T 3bu7_A 153 SGAYTIVD---GHKVELGANDFVLTPNGTWHEHGILES-GTECIWQDGLDIPLTNCLEANFYEVHPNDYQTT-DIPLNDS 227 (394)
T ss_dssp SCEEEEET---TEEEEECTTCEEEECTTCCEEEEECTT-CCCEEEEEEECHHHHHHTTCCCEEECTTSSCCC-CCCTTHH
T ss_pred eEEEEEEC---CEEEEEcCCCEEEECcCCCEEEEcCCC-CCCEEEEEcccchhhhhcCccccccCcccccCc-cCCccch
Confidence 99887774 358899999999999999999999 87 5899999888731 1 1112211 00000000 000000
Q ss_pred h-----hhcCccccccCCCCCCCC-cceec-------C--CCCCcccCCCceEEE-eCCcccccccccceeEEEEEEcCC
Q 039441 305 L-----KALSHHASSRRRHGRGST-APFNL-------L--SRKPIYNNNFGRFFE-ATPKDYQQLQEIDAGVTYVEINQG 368 (539)
Q Consensus 305 l-----~~l~~~~~~~~~~~~~~~-~~fnl-------~--~~~p~~sn~~G~i~~-~~~~~fP~L~~l~isva~v~L~pG 368 (539)
. -.|.|.. . .+....++ ..|.. . .....-....|.... +++.+=... ...|.+..+.|.||
T Consensus 228 ~~~~~~~~l~p~~-~-~~~~~~sP~~~y~w~~~~~~L~~~~~~~~~~~~~~~~l~l~nP~~g~~~-~~tl~~~~~~l~PG 304 (394)
T 3bu7_A 228 PLTYGGPALLPQL-D-KWDKPYSPLLKYSWEPTYEALLNYAKASDGSPYDGLILRYTNPQTGGHP-MLTMGASMQMLRPG 304 (394)
T ss_dssp HHHHCSTTEEESS-C-CCCCSSCSCCEECHHHHHHHHHHHHTTCCCBTTTBEEEEECCTTTSSCS-SSSCEEEEEEECTT
T ss_pred hhhhcCccccccc-c-cccCCCCCcEEecHHHHHHHHHHhhhccCcCcCCceEEEEeCCCCCCCC-CCeeeEEEEEECCC
Confidence 0 0000000 0 00000011 01111 0 000111222344333 343321111 23488999999999
Q ss_pred ceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEc
Q 039441 369 GMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVA 448 (539)
Q Consensus 369 gm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n 448 (539)
+...||.|+ ..++.||++|+|.+.| ++ ++ ..+++||+|+||+|..|.+.|
T Consensus 305 ~~~~~HrH~-~~~v~~VleG~G~~~V---~g------------------------e~--~~~~~GD~~~iP~g~~H~~~N 354 (394)
T 3bu7_A 305 EHTKAHRHT-GNVIYNVAKGQGYSIV---GG------------------------KR--FDWSEHDIFCVPAWTWHEHCN 354 (394)
T ss_dssp CBCCCEEES-SCEEEEEEECCEEEEE---TT------------------------EE--EEECTTCEEEECTTCCEEEEE
T ss_pred CcCCCcccC-CcEEEEEEeCeEEEEE---CC------------------------EE--EEEeCCCEEEECCCCeEEeEe
Confidence 999999996 5579999999997766 22 22 579999999999999999999
Q ss_pred CC-CCcEEEEEEeec
Q 039441 449 SP-NEKLLTVGFSLN 462 (539)
Q Consensus 449 ~g-ne~l~~v~F~~n 462 (539)
.+ ++++.+++|.+.
T Consensus 355 ~g~~e~~~ll~i~D~ 369 (394)
T 3bu7_A 355 TQERDDACLFSFNDF 369 (394)
T ss_dssp CCSSCCEEEEEEESH
T ss_pred CCCCCCeEEEEeeCH
Confidence 87 788999998643
No 40
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.71 E-value=4.4e-16 Score=153.56 Aligned_cols=185 Identities=12% Similarity=0.131 Sum_probs=129.9
Q ss_pred eEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEE-eCCCCeEEEEecCCCceEEEEEEecc
Q 039441 202 RLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVIS-VPAGTTYYLSNQDNVDRLHVAKLLQP 280 (539)
Q Consensus 202 Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~-iPaG~~h~i~N~g~~e~L~iv~l~d~ 280 (539)
.+.++++.|++..-+||+...+++||++|++.+++ ...++.|.+||.++ ||+|++|.+.|.++ ++++++-+.+.
T Consensus 35 ~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~----~~~~~~l~~Gd~i~~ip~~~~H~~~n~~~-~~~~~l~i~r~ 109 (243)
T 3h7j_A 35 EVLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTV----GDVTRKMTALESAYIAPPHVPHGARNDTD-QEVIAIDIKRL 109 (243)
T ss_dssp EEEEEEECTTEEEEEECCSSEEEEEEEESEEEEEE----TTEEEEEETTTCEEEECTTCCEEEEECSS-SCEEEEEEEEC
T ss_pred EEEEEEECCCCccCCEECCCcEEEEEEEeEEEEEE----CCEEEEECCCCEEEEcCCCCcEeeEeCCC-CcEEEEEEecc
Confidence 45566789999999999999999999999999987 23578999999885 99999999999984 66665544321
Q ss_pred CCCCCCceeccccCccEEEcChhhhhhcCccccccCCCCCCCCcceecCCCCCcccCCCceEEEeCCcccccccccceeE
Q 039441 281 VNTPGQFRVQQRQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPFNLLSRKPIYNNNFGRFFEATPKDYQQLQEIDAGV 360 (539)
Q Consensus 281 ~n~pg~f~~~~q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fnl~~~~p~~sn~~G~i~~~~~~~fP~L~~l~isv 360 (539)
...+ .+.. ..+ -..+.|..... . .....+.+....+.+
T Consensus 110 ~~~e----------------------~~~~--------p~g-~~~~~L~~~~~-~----------~~~~~~~~~~~~~~~ 147 (243)
T 3h7j_A 110 KADE----------------------TYTS--------PED-YFLDIFKTRDL-L----------PGMEVTFFVEDWVEI 147 (243)
T ss_dssp CTTC----------------------CCCC--------CTT-SEECCEECSCS-B----------TTBCEEEEEETTEEE
T ss_pred Cccc----------------------cCCC--------chh-hhhhhccCccc-c----------cCcceeeeccceeEE
Confidence 1000 0000 000 00001110000 0 000111122334677
Q ss_pred EEEEEcC-CceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeC
Q 039441 361 TYVEINQ-GGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIP 439 (539)
Q Consensus 361 a~v~L~p-Ggm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVP 439 (539)
..+.|.| |+...+|||+ ..+++||++|++.+.+-. +. ..|++||+++||
T Consensus 148 ~~~~~~p~g~~~~~H~H~-~~e~~~Vl~G~~~~~i~~---------------------------~~--~~l~~Gd~i~ip 197 (243)
T 3h7j_A 148 MLAKIPGNGGEMPFHKHR-NEQIGICIGGGYDMTVEG---------------------------CT--VEMKFGTAYFCE 197 (243)
T ss_dssp EEEEECTTTEEEEEECCS-SEEEEEECSSCEEEEETT---------------------------EE--EEECTTCEEEEC
T ss_pred EEEEECCCCCcCCCEeCC-CcEEEEEEECEEEEEECC---------------------------EE--EEECCCCEEEEC
Confidence 8889999 9999999996 479999999999887532 12 469999999999
Q ss_pred CCCeEEEEcCCCCcEEEEEEeecC
Q 039441 440 PGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 440 aG~~h~i~n~gne~l~~v~F~~na 463 (539)
+|.+|.+.|.+++++.++.+.+.+
T Consensus 198 ~~~~H~~~n~~~~~~~~l~v~~p~ 221 (243)
T 3h7j_A 198 PREDHGAINRSEKESKSINIFFPP 221 (243)
T ss_dssp TTCCEEEEECSSSCEEEEEEEESC
T ss_pred CCCcEEeEeCCCCCEEEEEEEcCC
Confidence 999999999999999998876543
No 41
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.70 E-value=8.3e-16 Score=154.31 Aligned_cols=189 Identities=13% Similarity=0.166 Sum_probs=134.5
Q ss_pred eeEEEeeeCCCeeeccc--ccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 201 YRLAILEANPSTLVVPH--HSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 201 ~Rl~il~l~P~~l~lPh--~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
+-+.++++.|++-..++ +..+.+++||++|+..+++ +.+++.|++||.++||+|++|++.|.+ ++.++++.+.
T Consensus 62 ~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~----~~~~~~L~~GD~~~~~~~~~H~~~N~~-~~~~~~l~v~ 136 (274)
T 1sef_A 62 FVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSD----GQETHELEAGGYAYFTPEMKMYLANAQ-EADTEVFLYK 136 (274)
T ss_dssp SEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEEC----SSCEEEEETTEEEEECTTSCCEEEESS-SSCEEEEEEE
T ss_pred EEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEE----CCEEEEECCCCEEEECCCCCEEEEeCC-CCCEEEEEEE
Confidence 34556677999876544 3457899999999999887 235899999999999999999999998 5778777766
Q ss_pred ccCC-CCCCceeccccCccEEEcChhhhhhcCccccccCCCCCCCCcceecCCCCCcc-c-CCCceEEEeCCcccccccc
Q 039441 279 QPVN-TPGQFRVQQRQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPFNLLSRKPIY-N-NNFGRFFEATPKDYQQLQE 355 (539)
Q Consensus 279 d~~n-~pg~f~~~~q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fnl~~~~p~~-s-n~~G~i~~~~~~~fP~L~~ 355 (539)
.... .+|. .+.-.|+++ .+..+.. . ..+..+..+.+... .
T Consensus 137 ~~y~~~~g~-----~p~~~v~~~----------------------------~d~~~~~~~~~~g~~~~~l~~~~~----~ 179 (274)
T 1sef_A 137 KRYQPLAGH-----QPYKVVGSI----------------------------HDQQPEEYEGMTDVLLWSLLPKEF----D 179 (274)
T ss_dssp EECCCCTTC-----CCCCEEEEG----------------------------GGSCCEEGGGCTTEEEEECSCSST----T
T ss_pred eeeeeCCCC-----CCcceeCCh----------------------------HHCCccccCCCCCeEEEEeCCccc----C
Confidence 4321 1110 111122221 1111111 1 12233444443222 2
Q ss_pred cceeEEEEEEcCCceecc-eecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCc
Q 039441 356 IDAGVTYVEINQGGMMVP-HYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGV 434 (539)
Q Consensus 356 l~isva~v~L~pGgm~~P-HwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GD 434 (539)
.++.+..+.|.||+...+ ||| ...+++||++|++.+.+-. +. ..|++||
T Consensus 180 ~~~~~~~~~l~pg~~~~~~H~H-~~~E~~yVl~G~~~~~i~~---------------------------~~--~~l~~GD 229 (274)
T 1sef_A 180 FDMNMHILSFEPGASHAYIETH-VQEHGAYLISGQGMYNLDN---------------------------EW--YPVEKGD 229 (274)
T ss_dssp CSEEEEEEEECTTCBCSSCBCC-SCCEEEEEEECEEEEEETT---------------------------EE--EEEETTC
T ss_pred CCEEEEEEEECCCCccCcceec-cCeEEEEEEeCEEEEEECC---------------------------EE--EEECCCC
Confidence 368899999999999988 999 5689999999999997621 12 5799999
Q ss_pred EEEeCCCCeEEEEcCCC-CcEEEEEEee
Q 039441 435 VFIIPPGHPIALVASPN-EKLLTVGFSL 461 (539)
Q Consensus 435 V~vVPaG~~h~i~n~gn-e~l~~v~F~~ 461 (539)
+++||++.+|++.|.++ +++.++++.+
T Consensus 230 ~i~i~~~~~H~~~n~~~~~~~~~l~~~~ 257 (274)
T 1sef_A 230 YIFMSAYVPQAAYAVGREEPLMYVYSKD 257 (274)
T ss_dssp EEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred EEEECCCCCEEEEeCCCCCCEEEEEEEc
Confidence 99999999999999988 8899988754
No 42
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.70 E-value=8.4e-17 Score=168.11 Aligned_cols=150 Identities=13% Similarity=0.187 Sum_probs=124.1
Q ss_pred cceecCCCCCcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccc
Q 039441 324 APFNLLSRKPIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWS 403 (539)
Q Consensus 324 ~~fnl~~~~p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s 403 (539)
..|++.+..+. ...+|+++.++...+|.+. ++++..+.|.||++..||||+ +.+|+||++|++++++++.++
T Consensus 48 ~~~~~~~~~~~-~~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~g---- 119 (385)
T 1j58_A 48 MKFSFSDTHNR-LEKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEKG---- 119 (385)
T ss_dssp CEECGGGSCCE-EETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTTS----
T ss_pred eEEEcccCCcc-ccCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCCC----
Confidence 67788777664 4579999999999999988 599999999999999999997 999999999999999999865
Q ss_pred hhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecCCCCccccccccchhcccCcH
Q 039441 404 QESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNARNNQRNFLAGKINIMNQVER 483 (539)
Q Consensus 404 ~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na~n~~~~fLAG~~svL~~~p~ 483 (539)
+.+...|++||+++||+|.+|++.|.+ +++.|+.++..........+ ...+||+.+|.
T Consensus 120 --------------------~~~~~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~p~ 177 (385)
T 1j58_A 120 --------------------RSFIDDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTF-QLTDWLAHTPK 177 (385)
T ss_dssp --------------------CEEEEEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEE-EHHHHHHTSCH
T ss_pred --------------------cEEEEEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchh-hhhhhhhcccH
Confidence 344568999999999999999999986 46888875544422221111 12689999999
Q ss_pred HHHHHHcCCCHHHHHHhhcC
Q 039441 484 ETMEVAFNVPARLIERVFGT 503 (539)
Q Consensus 484 evLa~AF~vs~e~v~kL~~~ 503 (539)
++|+++|+++.+++++|...
T Consensus 178 evla~~~~vs~~~~~~l~~~ 197 (385)
T 1j58_A 178 EVIAANFGVTKEEISNLPGK 197 (385)
T ss_dssp HHHHHHHTCCTGGGTTSCSS
T ss_pred HHHHHHhCCCHHHHHhcccc
Confidence 99999999999999998764
No 43
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.69 E-value=2.2e-15 Score=147.20 Aligned_cols=187 Identities=17% Similarity=0.293 Sum_probs=129.6
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEec
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQ 279 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d 279 (539)
+..++++.+.|++.+-+|.++.++++||++|++.+++ +-+++.|++||++++|+|++|.+.|.. +++++.++-
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i----~~~~~~l~~Gd~~~~p~~~~H~~~a~~---~~~~l~i~~ 108 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFI----ENNKKTISNGDFLEITANHNYSIEARD---NLKLIEIGE 108 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCSSCEEEEEEESEEEEEE----SSCEEEEETTEEEEECSSCCEEEEESS---SEEEEEEEE
T ss_pred CcEEEEEEECCCCccCccccCCCEEEEEEeCEEEEEE----CCEEEEECCCCEEEECCCCCEEEEECC---CcEEEEEEe
Confidence 5577888889999998998899999999999999987 235799999999999999999999975 355555443
Q ss_pred cCCCCCCceeccccCccEEEcChhhhhhcCccccccCCCCCCCCcceecCCCCCcccCCCceE-EEeCCcccccccccce
Q 039441 280 PVNTPGQFRVQQRQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPFNLLSRKPIYNNNFGRF-FEATPKDYQQLQEIDA 358 (539)
Q Consensus 280 ~~n~pg~f~~~~q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fnl~~~~p~~sn~~G~i-~~~~~~~fP~L~~l~i 358 (539)
... +... ....++.+. ....|++.+..+ |.. ++.. ..+ ..+-++
T Consensus 109 ~~~------------~~~~--~~~~~~~l~------------~~~~~~~~d~~~-~~~-g~~~~~~l-------~~~~~~ 153 (227)
T 3rns_A 109 KIG------------DGNM--ENKTLKMLE------------SASAFNLAEVVE-YQE-GKIVSKNL-------VAKPNL 153 (227)
T ss_dssp CC------------------------------------------CCEESGGGSC-CCT-TCEEEEEE-------EEETTE
T ss_pred ecc------------cchh--hhhHhhcCC------------ccccCcHHHccc-cCC-CCEEEEEE-------EECCCe
Confidence 100 0000 000011111 123455544332 222 3321 111 122358
Q ss_pred eEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe
Q 039441 359 GVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII 438 (539)
Q Consensus 359 sva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV 438 (539)
.+..+.+.||+...+|||+ ..+++||++|++.+.+= + + ...|++||.++|
T Consensus 154 ~~~~~~~~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i~---g------------------------~--~~~l~~Gd~i~i 203 (227)
T 3rns_A 154 VMTIMSFWKGESLDPHKAP-GDALVTVLDGEGKYYVD---G------------------------K--PFIVKKGESAVL 203 (227)
T ss_dssp EEEEEEECTTCEEEEECCS-SEEEEEEEEEEEEEEET---T------------------------E--EEEEETTEEEEE
T ss_pred EEEEEEECCCCccCCEECC-CcEEEEEEeEEEEEEEC---C------------------------E--EEEECCCCEEEE
Confidence 8899999999999999996 67999999999998762 2 1 357999999999
Q ss_pred CCCCeEEEEcCCCCcEEEEEE
Q 039441 439 PPGHPIALVASPNEKLLTVGF 459 (539)
Q Consensus 439 PaG~~h~i~n~gne~l~~v~F 459 (539)
|+|.+|++.|. .+++.++.+
T Consensus 204 p~~~~H~~~~~-~~~~~~ll~ 223 (227)
T 3rns_A 204 PANIPHAVEAE-TENFKMLLI 223 (227)
T ss_dssp CTTSCEEEECC-SSCEEEEEE
T ss_pred CCCCcEEEEeC-CCCEEEEEE
Confidence 99999999993 345666543
No 44
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.63 E-value=1.4e-14 Score=146.19 Aligned_cols=195 Identities=15% Similarity=0.187 Sum_probs=132.8
Q ss_pred eeeEEEeeeCCCeee-cc-cccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEE
Q 039441 200 NYRLAILEANPSTLV-VP-HHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKL 277 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~-lP-h~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l 277 (539)
.+-+.++++.|++-. .| |++...+++||++|++.+.+= .+++.|++||.++||+|++|++.|.+ +++++++.+
T Consensus 67 ~~~~~~~~l~PG~~~~~~~h~H~~eE~~~Vl~G~l~v~v~----g~~~~L~~GD~i~ip~~~~H~~~N~g-~~~~~~l~v 141 (278)
T 1sq4_A 67 TFSQYIVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTLQ----GQVHAMQPGGYAFIPPGADYKVRNTT-GQHTRFHWI 141 (278)
T ss_dssp SCEEEEEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEES----SCEEEECTTEEEEECTTCCEEEECCS-SSCEEEEEE
T ss_pred cEEEEEEEECCCCccCCCCcCCCceEEEEEEeCEEEEEEC----CEEEEECCCCEEEECCCCcEEEEECC-CCCEEEEEE
Confidence 445556667999877 45 447889999999999999872 35789999999999999999999998 477887776
Q ss_pred eccCCC-CCCceeccccCccEEEcChhhhhhcCccccccCCCCCCCCcceecCCCCCcccCCCc--eEEEeCCccccccc
Q 039441 278 LQPVNT-PGQFRVQQRQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPFNLLSRKPIYNNNFG--RFFEATPKDYQQLQ 354 (539)
Q Consensus 278 ~d~~n~-pg~f~~~~q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fnl~~~~p~~sn~~G--~i~~~~~~~fP~L~ 354 (539)
...... +|.- .+.-.+..+ ..+.+. ++ + ...+. ....+. |.-.
T Consensus 142 ~~~y~~~~g~~----~p~~~vgn~-----~di~~~-------------~~------~--~~~~~~~~~r~l~----p~~~ 187 (278)
T 1sq4_A 142 RKHYQKVDGVP----LPEAFVTNE-----QDIQPL-------------VM------P--DTEGRWSTTRFVD----MSDM 187 (278)
T ss_dssp EEECCCCTTCC----CCCCEEEEG-----GGSCCE-------------EC------S--SGGGCEEEECSSC----TTCT
T ss_pred EeccccCCCCc----CCcccccch-----hhcCcc-------------cC------C--CCCCceeEEEEec----CCCc
Confidence 643211 1100 011011111 001100 00 0 00011 111222 2222
Q ss_pred ccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCc
Q 039441 355 EIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGV 434 (539)
Q Consensus 355 ~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GD 434 (539)
..++.+..++|.||+-...|.+..-.+.+||++|+|.+.+ ++ + ...|++||
T Consensus 188 ~~~~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~---~~------------------------~--~~~v~~GD 238 (278)
T 1sq4_A 188 RHDMHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRL---NQ------------------------D--WVEVEAGD 238 (278)
T ss_dssp TCSEEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEE---TT------------------------E--EEEEETTC
T ss_pred CCCeEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEE---CC------------------------E--EEEeCCCC
Confidence 4579999999999999886443356789999999998865 22 1 25899999
Q ss_pred EEEeCCCCeEEEEcCCCCcEEEEEEeec
Q 039441 435 VFIIPPGHPIALVASPNEKLLTVGFSLN 462 (539)
Q Consensus 435 V~vVPaG~~h~i~n~gne~l~~v~F~~n 462 (539)
++++++|.+|++.|.|+++|+||.+.+-
T Consensus 239 ~~~~~~~~~h~~~n~g~~~~~yl~~~d~ 266 (278)
T 1sq4_A 239 FMWLRAFCPQACYSGGPGRFRYLLYKDV 266 (278)
T ss_dssp EEEEEESCCEEEECCSSSCEEEEEEEEC
T ss_pred EEEECCCCCEEEEcCCCCCEEEEEEEEc
Confidence 9999999999999999999999976544
No 45
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.60 E-value=9.6e-14 Score=139.65 Aligned_cols=191 Identities=11% Similarity=0.106 Sum_probs=136.2
Q ss_pred ceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 199 DNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
+.+.+.+++|.|++-..+|++.+.+++||++|+..|.+= ..+++.|++||.++||+|..|++.|. ++.+++.+.
T Consensus 68 ~~f~~~lv~l~PGg~s~~~~h~~EEfiyVleG~l~l~l~---~g~~~~L~~Gds~y~p~~~~H~~~N~---~~Ar~l~V~ 141 (266)
T 4e2q_A 68 SHFVMYLAKMKEMSSSGLPPQDIERLIFVVEGAVTLTNT---SSSSKKLTVDSYAYLPPNFHHSLDCV---ESATLVVFE 141 (266)
T ss_dssp CSSEEEEEEECSSEECCCCCTTEEEEEEEEEECEEEEC-----CCCEEECTTEEEEECTTCCCEEEES---SCEEEEEEE
T ss_pred CcEEEEEEEECcCCcCCCCCCCCeEEEEEEEEEEEEEEC---CCcEEEEcCCCEEEECCCCCEEEEeC---CCEEEEEEE
Confidence 466677888899998877888999999999999988762 12479999999999999999999995 346655554
Q ss_pred ccCCC-CCCceeccccCccEEEcChhhhhhcCccccccCCCCCCCCcceecCCCCCccc-CCCceEEEeCCccccccccc
Q 039441 279 QPVNT-PGQFRVQQRQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPFNLLSRKPIYN-NNFGRFFEATPKDYQQLQEI 356 (539)
Q Consensus 279 d~~n~-pg~f~~~~q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fnl~~~~p~~s-n~~G~i~~~~~~~fP~L~~l 356 (539)
..... +| ..-..|+. |..+-++.-- ...-....+.+.++ ..
T Consensus 142 k~y~~~~g------~~p~~~v~---------------------------~~~dv~~~~~~g~~~~~r~l~p~~~----~~ 184 (266)
T 4e2q_A 142 RRYEYLGS------HTTELIVG---------------------------STDKQPLLETPGEVFELRKLLPMSV----AY 184 (266)
T ss_dssp EECCCCTT------CCCCCEEE---------------------------EGGGSCCBCCTTCCSEEEESSCCST----TC
T ss_pred eEeeeCCC------CCCceeeC---------------------------cHhHCCCcccCCCcEEEEEccCccc----cc
Confidence 32110 00 00111111 1111111111 11112445555543 55
Q ss_pred ceeEEEEEEcCCceecc-eecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 357 DAGVTYVEINQGGMMVP-HYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 357 ~isva~v~L~pGgm~~P-HwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
++.|..++|+|||.... |.| ...+.+||++|+|.+.+=. -...|++||+
T Consensus 185 d~~~~~~t~~PG~~~p~~e~H-~~eh~~~vL~G~g~y~l~~-----------------------------~~~~V~~GD~ 234 (266)
T 4e2q_A 185 DFNIHTMDFQPGEFLNVKEVH-YNQHGLLLLEGQGIYRLGD-----------------------------NWYPVQAGDV 234 (266)
T ss_dssp SEEEEEEEECTTCBCSSCCCC-SCCEEEEEEECEEEEEETT-----------------------------EEEEEETTCE
T ss_pred ceEEEEEEECCCcCcCCceEc-ccceEEEEEeceEEEEECC-----------------------------EEEEecCCCE
Confidence 89999999999999986 666 5669999999999886422 1257999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEeec
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSLN 462 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~n 462 (539)
+++|++.+|++.|+|++++.+|-.++-
T Consensus 235 i~~~~~~~h~~~n~G~e~~~yl~ykd~ 261 (266)
T 4e2q_A 235 IWMAPFVPQWYAALGKTRSRYLLYKDV 261 (266)
T ss_dssp EEECTTCCEEEEEESSSCEEEEEEEEC
T ss_pred EEECCCCcEEEEeCCCCCEEEEEEccc
Confidence 999999999999999999999976654
No 46
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.58 E-value=3e-13 Score=133.86 Aligned_cols=190 Identities=14% Similarity=0.112 Sum_probs=130.7
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEec
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQ 279 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d 279 (539)
.+-+.++++.|++-..+++ ..+++||++|++.+++ ..+++.|++||.++||+|++|++.|. .+++++.+..
T Consensus 49 ~~~~~~~~l~Pg~~~~~~~--~ee~~~Vl~G~~~~~~----~~~~~~l~~Gd~~~~p~~~~H~~~n~---~~~~~l~v~~ 119 (246)
T 1sfn_A 49 RFVQFTAEMPAGAQATESV--YQRFAFVLSGEVDVAV----GGETRTLREYDYVYLPAGEKHMLTAK---TDARVSVFEK 119 (246)
T ss_dssp SSEEEEEEECTTCEEECCS--SEEEEEEEEEEEEEEC----SSCEEEECTTEEEEECTTCCCEEEEE---EEEEEEEEEE
T ss_pred cEEEEEEEECCCCcCCCCc--eeEEEEEEECEEEEEE----CCEEEEECCCCEEEECCCCCEEEEeC---CCEEEEEEEe
Confidence 3445566779998776665 8899999999998886 23579999999999999999999998 4465555443
Q ss_pred cCCC-CCCceeccccCccEEEcChhhhhhcCccccccCCCCCCCCcceecCCCCCc-ccCCCce-EEEeCCccccccccc
Q 039441 280 PVNT-PGQFRVQQRQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPFNLLSRKPI-YNNNFGR-FFEATPKDYQQLQEI 356 (539)
Q Consensus 280 ~~n~-pg~f~~~~q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fnl~~~~p~-~sn~~G~-i~~~~~~~fP~L~~l 356 (539)
.... +|. ..+. .++. |..+-.+. +....|. +..+.+.+ + ..
T Consensus 120 ~y~~~~g~----~~p~-~~vg---------------------------~~~dv~~~~~~~~~g~~~r~l~p~~---~-~~ 163 (246)
T 1sfn_A 120 PYQTVEGV----QAPG-VYWG---------------------------NERENPGYPFEGDDHLIARKLLPDE---P-AF 163 (246)
T ss_dssp CCCCBTTB----CCCC-CEEE---------------------------ETTTCCCEETTSCTTEEEEECSCCC---T-TC
T ss_pred eeccCCCC----cCCc-eeec---------------------------cHhhCCccccCCCCCeEEEEeCCCc---c-CC
Confidence 2110 000 0000 1111 11111111 1111232 33333322 1 45
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
++.+..++|.||+-...|.+....+.+||++|++.+.+ ++ +. ..|++||.+
T Consensus 164 ~~~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~---~~------------------------~~--~~l~~GD~~ 214 (246)
T 1sfn_A 164 DFMVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKL---EE------------------------NY--YPVTAGDII 214 (246)
T ss_dssp SEEEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEE---TT------------------------EE--EEEETTCEE
T ss_pred CeEEEEEEECCCCccCcccCCCceEEEEEEECEEEEEE---CC------------------------EE--EEcCCCCEE
Confidence 78999999999999886544467899999999999876 22 23 589999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 437 IIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
+++++.+|++.|.+++++.+|.+++-+
T Consensus 215 ~~~~~~pH~~~n~g~~~~~yl~~kd~~ 241 (246)
T 1sfn_A 215 WMGAHCPQWYGALGRNWSKYLLYKDMN 241 (246)
T ss_dssp EECTTCCEEEEEESSSCEEEEEEEECS
T ss_pred EECCCCCEEEEcCCCCCEEEEEEEecc
Confidence 999999999999999999999887654
No 47
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.57 E-value=2.1e-13 Score=142.71 Aligned_cols=223 Identities=18% Similarity=0.188 Sum_probs=142.9
Q ss_pred ceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 199 DNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
..+-..+..+.|++-.-+|-|..+++.||++|+|..++|+. +.+.+++||+|++|+|+.|.+.|+| +++|+++.++
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~~vdG---~~~~~~~GD~v~iP~g~~H~~~N~g-de~l~~l~v~ 176 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVVNG---DPVRMSRGDLLLTPGWCFHGHMNDT-DQPMAWIDGL 176 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEESSCEEEECSSCEEEEEEETT---EEEEEETTCEEEECTTCCEEEEECS-SSCEEEEEEE
T ss_pred CceEEEEEEECCCCccCceecccceEEEEEecceEEEEECC---EEEEEeCCCEEEECCCCcEEeEeCC-CCCeEEEEec
Confidence 34566667779999999997788899999999997566643 6899999999999999999999998 5899999988
Q ss_pred ccCC---CCCCcee-ccc---cCccEEEcChhh-h---hhcCccccccCCCCCCCC---ccee-----cCC-----CCCc
Q 039441 279 QPVN---TPGQFRV-QQR---QQGTIKRASQEQ-L---KALSHHASSRRRHGRGST---APFN-----LLS-----RKPI 334 (539)
Q Consensus 279 d~~n---~pg~f~~-~~q---~~G~Ivrv~~eq-l---~~l~~~~~~~~~~~~~~~---~~fn-----l~~-----~~p~ 334 (539)
|-.- ..-.|.. ... ++-.. ..+.+. + ..|.|... ......++ +++. |.. ....
T Consensus 177 D~Pl~~~l~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~l~P~~~--~~~~~~sP~~~ypw~~~~~aL~~~~~l~~~~~ 253 (368)
T 3nw4_A 177 DIPFSQQMDVGFFEFGSDRVTDYATP-NFSRGERLWCHPGLRPLSG--LQNTVASPIGAYRWEFTDRALTEQLLLEDEGQ 253 (368)
T ss_dssp CHHHHHHHTCCCEEECCSSCSCCCCC-SSCHHHHHHCSTTCCCGGG--CSCCSSCSCCEECHHHHHHHHHHHHHHHHTTC
T ss_pred chHHHhhcCceeeecccccccccccc-cCCcccchhhccccccccc--cCCCCCCCceecCHHHHHHHHHhhhhhhhccC
Confidence 8421 1112221 100 00000 000000 0 01111100 00001111 1111 111 1111
Q ss_pred ccCCC-ce--EEEeCCcc-cccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhh
Q 039441 335 YNNNF-GR--FFEATPKD-YQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQ 410 (539)
Q Consensus 335 ~sn~~-G~--i~~~~~~~-fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~ 410 (539)
..... |. +..+++.+ -+.+.. |++....|.||.-..||=|+ +..|.||++|+|.+.| ++
T Consensus 254 ~~~~~~g~~~~~y~NP~tg~~~~pt--i~~~~~~L~pG~~t~~hRht-~s~Vy~V~eG~G~~~I---~~----------- 316 (368)
T 3nw4_A 254 PATVAPGHAAIRYVNPTTGGDVMPT--LRCEFHRLRAGTETATRNEV-GSTVFQVFEGAGAVVM---NG----------- 316 (368)
T ss_dssp SCSSBTTEEEEECBCTTTSSBSSSS--CEEEEEEECTTCBCCCEEES-SCEEEEEEESCEEEEE---TT-----------
T ss_pred CCcccCceEEEEEeCCCCCCCcchh--HHhheEEECCCCccCCeecc-ccEEEEEEeCcEEEEE---CC-----------
Confidence 11111 33 34444432 345554 88899999999999999994 6699999999999988 22
Q ss_pred hHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeec
Q 039441 411 QEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLN 462 (539)
Q Consensus 411 ~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~n 462 (539)
++ +++++||+|+||.+.+|...|. +++.+++|.+.
T Consensus 317 -------------~~--~~w~~gD~fvvP~w~~h~~~n~--~~a~Lf~~~D~ 351 (368)
T 3nw4_A 317 -------------ET--TKLEKGDMFVVPSWVPWSLQAE--TQFDLFRFSDA 351 (368)
T ss_dssp -------------EE--EEECTTCEEEECTTCCEEEEES--SSEEEEEEESH
T ss_pred -------------EE--EEecCCCEEEECCCCcEEEEeC--CCEEEEEEeCH
Confidence 23 5799999999999999999997 46777776543
No 48
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.27 E-value=4e-11 Score=115.02 Aligned_cols=102 Identities=16% Similarity=0.189 Sum_probs=77.8
Q ss_pred CceEEEeeccCccccccc--CcceeeEEEeeeCCCeeecccccC-CCcEEEEEeceEEEEEEeCC----CceeeecCCCc
Q 039441 179 SGHMRVLQRFSQKSHLLR--GIDNYRLAILEANPSTLVVPHHSD-AETILVLLKGKGVITLVSHE----RRESFNMEHGD 251 (539)
Q Consensus 179 ~G~i~vl~~f~~~s~~l~--gv~~~Rl~il~l~P~~l~lPh~~d-A~~~~yV~~G~g~i~~v~pg----~~~~~~v~~GD 251 (539)
++.+.+ .+....+.|. |+..++ +++.|++...||||. +.+|+||++|++.+++++.+ ...++.|++||
T Consensus 53 G~~v~~--~~~~~~p~l~~~~~~~~~---~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD 127 (201)
T 1fi2_A 53 GSAVTE--LDVAEWPGTNTLGVSMNR---VDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGE 127 (201)
T ss_dssp SEEEEE--ESTTTCGGGTTSSCEEEE---EEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTC
T ss_pred CcEEEE--EecccCCCcccCceEEEE---EEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCC
Confidence 444554 2344445555 444444 555999999999887 68999999999999999764 33489999999
Q ss_pred EEEeCCCCeEEEEecCCCceEEEEEEeccCCCCCCc
Q 039441 252 VISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPGQF 287 (539)
Q Consensus 252 V~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg~f 287 (539)
+++||+|++||+.|.+ +++++++.++.+. +|+..
T Consensus 128 ~~~iP~g~~H~~~N~g-~~~~~~l~v~~~~-~p~~~ 161 (201)
T 1fi2_A 128 TFVIPRGLMHFQFNVG-KTEAYMVVSFNSQ-NPGIV 161 (201)
T ss_dssp EEEECTTCCEEEEECS-SSCEEEEEEESSS-CCCCE
T ss_pred EEEECCCCeEEEEeCC-CCCEEEEEEECCC-CCCeE
Confidence 9999999999999998 4789988888643 34443
No 49
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.01 E-value=1.3e-09 Score=95.28 Aligned_cols=79 Identities=19% Similarity=0.277 Sum_probs=67.1
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
++.+.++.|.||+...+|||+...++.||++|++.+.+-.. +. ..|++||++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~--------------------------~~--~~l~~Gd~~ 89 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNG--------------------------IV--THLKAGDIA 89 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTT--------------------------CE--EEEETTEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECCC--------------------------eE--EEeCCCCEE
Confidence 57889999999999999999878999999999998865221 12 579999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 437 IIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
+||+|.+|.+.|.+++++.++++.+..
T Consensus 90 ~i~~~~~H~~~n~~~~~~~~l~v~~p~ 116 (125)
T 3h8u_A 90 IAKPGQVHGAMNSGPEPFIFVSVVAPG 116 (125)
T ss_dssp EECTTCCCEEEECSSSCEEEEEEEEST
T ss_pred EECCCCEEEeEeCCCCCEEEEEEECCC
Confidence 999999999999999999999876543
No 50
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=99.00 E-value=6e-08 Score=96.04 Aligned_cols=183 Identities=15% Similarity=0.196 Sum_probs=116.7
Q ss_pred ceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 199 DNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
..+.+.++.+ .+.+.+-.|. .++++||++|+.+|+. + -....+++||+++||+|+.+-|...+. -++ +.+.
T Consensus 45 ~~~~~G~~~~-~g~~~v~~~p-~dE~~~VleG~~~lt~---~-g~~~~~~~Gd~~~ip~G~~~~w~~~~~-~~~--~y~~ 115 (238)
T 3myx_A 45 QGIAAGIVEF-GTALSVEAYP-YTEMLVMHRGSVTLTS---G-TDSVTLSTGESAVIGRGTQVRIDAQPE-SLW--AFCA 115 (238)
T ss_dssp TSEEEEEEEE-CSEEEESSCS-SEEEEEEEESEEEEEE---T-TEEEEEETTCEEEECTTCCEEEEECTT-EEE--EEEE
T ss_pred CCeEEEEEEe-ccccccccCC-CcEEEEEEEeEEEEEC---C-CeEEEEcCCCEEEECCCCEEEEEecCC-eEE--EEEe
Confidence 4566777888 7777764433 3899999999999997 2 478889999999999999999999873 333 2222
Q ss_pred cc-CCCCCCceeccccCccEEEcChhhhhhcCccccccCCCCCCCCcceecCCCCCcccCCCceEEEeCCcccccccccc
Q 039441 279 QP-VNTPGQFRVQQRQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPFNLLSRKPIYNNNFGRFFEATPKDYQQLQEID 357 (539)
Q Consensus 279 d~-~n~pg~f~~~~q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fnl~~~~p~~sn~~G~i~~~~~~~fP~L~~l~ 357 (539)
-+ ...| .+.| |+.+..+ ..|.|.. ...+=.+.+..|... ...+... .+-.
T Consensus 116 ~~~~~~p-------~~~~-~~~i~~~--~~l~P~~---------~p~p~~~l~G~P~~~-----~~~~~~~-----~~g~ 166 (238)
T 3myx_A 116 STQASGP-------DKSG-ITALDRL--ALLTPSS---------PPDPSIMISPLPQCR-----SNNLFED-----TAST 166 (238)
T ss_dssp ECSCCSC-------CCCS-EEEECTT--CCCEEEC---------CCCGGGBSSCCCCEE-----EEEEEEC-----SSSS
T ss_pred ccCCCCC-------CCCc-cEEecCC--CCCCCCC---------CCChhheecCCchhe-----eeEEEEC-----CCCC
Confidence 22 2223 1244 5555432 1122210 011122333344321 1111110 1224
Q ss_pred eeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEE
Q 039441 358 AGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFI 437 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~v 437 (539)
+++..-..+||..+ + |+-..+|++||++|+..++. .+| .. .+|++||+++
T Consensus 167 ~~~GiW~~tpG~~~-~-~~~~~~E~~~ILeG~v~lt~--~~G------------------------~~--~~~~aGD~~~ 216 (238)
T 3myx_A 167 LRIGVWDSTPYERI-S-RPHKIHELMNLIEGRVVLSL--ENG------------------------SS--LTVNTGDTVF 216 (238)
T ss_dssp CEEEEEEECCEEBC-C-EECSSCEEEEEEECCEEEEE--TTS------------------------CE--EEECTTCEEE
T ss_pred EEEeEEEeCCCEEE-C-CcCCCCEEEEEEEeEEEEEe--CCC------------------------CE--EEECCCCEEE
Confidence 78888899998844 3 22268899999999998864 333 12 4699999999
Q ss_pred eCCCCeEEEEcC
Q 039441 438 IPPGHPIALVAS 449 (539)
Q Consensus 438 VPaG~~h~i~n~ 449 (539)
||+|+...+.-.
T Consensus 217 ~P~G~~~tWev~ 228 (238)
T 3myx_A 217 VAQGAPCKWTST 228 (238)
T ss_dssp ECTTCEEEEEES
T ss_pred ECCCCEEEEEEC
Confidence 999999888766
No 51
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.00 E-value=2.9e-09 Score=101.41 Aligned_cols=83 Identities=16% Similarity=0.308 Sum_probs=72.1
Q ss_pred ceeEEEEEEcCCce------ecceecC--CCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEe
Q 039441 357 DAGVTYVEINQGGM------MVPHYNS--KATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISA 428 (539)
Q Consensus 357 ~isva~v~L~pGgm------~~PHwhp--nA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~ 428 (539)
++.+..+.|.||+. ..+|||+ +..++.||++|++.+.+-...+ +.+..
T Consensus 66 ~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g------------------------~~~~~ 121 (190)
T 1x82_A 66 DLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEG------------------------DAKWI 121 (190)
T ss_dssp CEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTC------------------------CEEEE
T ss_pred CeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCC------------------------cEEEE
Confidence 57888889999998 7899998 4689999999999999987644 35667
Q ss_pred eeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 429 NLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 429 ~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
.|++||+++||+|.+|.+.|.+++++.++++...+
T Consensus 122 ~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 122 SMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp EECTTCEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred EECCCcEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 89999999999999999999999999999876543
No 52
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.00 E-value=4.1e-09 Score=87.69 Aligned_cols=79 Identities=16% Similarity=0.226 Sum_probs=67.9
Q ss_pred ccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCc
Q 039441 355 EIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGV 434 (539)
Q Consensus 355 ~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GD 434 (539)
.-++.+..+.+.||+...+|||+...+++||++|++.+.+- + + ...|++||
T Consensus 25 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~---~------------------------~--~~~l~~Gd 75 (105)
T 1v70_A 25 SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVG---E------------------------E--EALLAPGM 75 (105)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEET---T------------------------E--EEEECTTC
T ss_pred CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEEC---C------------------------E--EEEeCCCC
Confidence 44688999999999999999998788999999999998762 1 1 25799999
Q ss_pred EEEeCCCCeEEEEcCCCCcEEEEEEeec
Q 039441 435 VFIIPPGHPIALVASPNEKLLTVGFSLN 462 (539)
Q Consensus 435 V~vVPaG~~h~i~n~gne~l~~v~F~~n 462 (539)
+++||+|.+|.+.|.+++++.++.+.+.
T Consensus 76 ~~~ip~~~~H~~~~~~~~~~~~~~v~~p 103 (105)
T 1v70_A 76 AAFAPAGAPHGVRNESASPALLLVVTAP 103 (105)
T ss_dssp EEEECTTSCEEEECCSSSCEEEEEEEES
T ss_pred EEEECCCCcEEeEeCCCCCEEEEEEeCC
Confidence 9999999999999988888998877543
No 53
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=98.99 E-value=2e-09 Score=99.11 Aligned_cols=84 Identities=19% Similarity=0.342 Sum_probs=70.4
Q ss_pred CcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeC-----CCceeeecCCCcEEEeCCCCeEEEEecCCCce
Q 039441 197 GIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSH-----ERRESFNMEHGDVISVPAGTTYYLSNQDNVDR 271 (539)
Q Consensus 197 gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~p-----g~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~ 271 (539)
|...+.+.++++.|++..-+|||+..+++||++|++.+.+-.. +....+.|++||+++||+|++|++.|.+.+++
T Consensus 37 g~~~~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~ 116 (163)
T 1lr5_A 37 GMKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHED 116 (163)
T ss_dssp CCSSEEEEEEEECTTCBCCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSC
T ss_pred CCCcEEEEEEEECCCCcCCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCC
Confidence 4455677777789999988999999999999999999988553 23378999999999999999999999873477
Q ss_pred EEEEEEecc
Q 039441 272 LHVAKLLQP 280 (539)
Q Consensus 272 L~iv~l~d~ 280 (539)
++++.++.+
T Consensus 117 ~~~l~i~~~ 125 (163)
T 1lr5_A 117 LQVLVIISR 125 (163)
T ss_dssp EEEEEEEES
T ss_pred EEEEEEECC
Confidence 888887764
No 54
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.99 E-value=1.5e-09 Score=94.89 Aligned_cols=78 Identities=12% Similarity=0.199 Sum_probs=65.1
Q ss_pred eeeEEEeeeCCCeeecccccC-CCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 200 NYRLAILEANPSTLVVPHHSD-AETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~d-A~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
.+.+.++++.|++..-+|||. ..+++||++|++.+.+ ++..++.|++||+++||+|++|++.|.+ +++++++.++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~---~~~~~~~l~~Gd~~~i~~~~~H~~~n~~-~~~~~~l~v~ 113 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQ---GNGIVTHLKAGDIAIAKPGQVHGAMNSG-PEPFIFVSVV 113 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEEC---STTCEEEEETTEEEEECTTCCCEEEECS-SSCEEEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEE---CCCeEEEeCCCCEEEECCCCEEEeEeCC-CCCEEEEEEE
Confidence 456667777999999999888 4899999999998865 2346899999999999999999999998 5889888888
Q ss_pred ccC
Q 039441 279 QPV 281 (539)
Q Consensus 279 d~~ 281 (539)
.+.
T Consensus 114 ~p~ 116 (125)
T 3h8u_A 114 APG 116 (125)
T ss_dssp EST
T ss_pred CCC
Confidence 764
No 55
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=98.98 E-value=3.4e-09 Score=96.26 Aligned_cols=85 Identities=19% Similarity=0.200 Sum_probs=71.0
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
.++.+..+.+.||+...+|||+...+++||++|++.+.+-..... ..++..|.+||+
T Consensus 41 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~-----------------------~~~~~~l~~Gd~ 97 (148)
T 2oa2_A 41 DHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDN-----------------------LHFQEEVFDDYA 97 (148)
T ss_dssp SSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTB-----------------------CCEEEEEETTCE
T ss_pred CceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCcccc-----------------------ceeeEEECCCCE
Confidence 357888999999999999999888899999999999988543210 124468999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
++||+|.+|.+.|.+++++.++++...+
T Consensus 98 i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 125 (148)
T 2oa2_A 98 ILIPAGTWHNVRNTGNRPLKLYSIYAPP 125 (148)
T ss_dssp EEECTTCEEEEEECSSSCEEEEEEEESC
T ss_pred EEECCCCcEEEEECCCCCEEEEEEECCC
Confidence 9999999999999988899988876554
No 56
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=98.96 E-value=2e-09 Score=99.14 Aligned_cols=86 Identities=20% Similarity=0.224 Sum_probs=70.1
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
++.+..+.|.||+...+||| ...+++||++|++.+.+-.....- ....-...|++||++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H-~~~E~~~Vl~G~~~~~~~~~~~~~--------------------~~~~~~~~l~~Gd~i 98 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRH-SCEEVFTVLKGKGTLLMGSSSLKY--------------------PGQPQEIPFFQNTTF 98 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEE-SSCEEEEEEECCEEEEECCSSSSS--------------------CCSCEEEEECTTEEE
T ss_pred cEEEEEEEECCCCcCCCeEC-CCCeEEEEEeCEEEEEECCccccc--------------------cCccEEEEeCCCCEE
Confidence 58889999999999999999 578999999999999887642100 001234689999999
Q ss_pred EeCCCCeEEEEcCC-CCcEEEEEEeecC
Q 039441 437 IIPPGHPIALVASP-NEKLLTVGFSLNA 463 (539)
Q Consensus 437 vVPaG~~h~i~n~g-ne~l~~v~F~~na 463 (539)
+||+|.+|.+.|.+ ++++.++++...+
T Consensus 99 ~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 126 (163)
T 1lr5_A 99 SIPVNDPHQVWNSDEHEDLQVLVIISRP 126 (163)
T ss_dssp EECTTCCEEEECCCSSSCEEEEEEEESS
T ss_pred EECCCCcEEeEeCCCCCCEEEEEEECCC
Confidence 99999999999998 8899999876554
No 57
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.95 E-value=3e-09 Score=97.69 Aligned_cols=79 Identities=18% Similarity=0.292 Sum_probs=69.1
Q ss_pred cceeEEEEEEcCCc-eecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCc
Q 039441 356 IDAGVTYVEINQGG-MMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGV 434 (539)
Q Consensus 356 l~isva~v~L~pGg-m~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GD 434 (539)
.++.+..+.|.||+ ...+|||+...+++||++|++.+.+-. +. ..|++||
T Consensus 44 ~~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~---------------------------~~--~~l~~Gd 94 (162)
T 3l2h_A 44 RHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMEN---------------------------DQ--YPIAPGD 94 (162)
T ss_dssp CSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETT---------------------------EE--EEECTTC
T ss_pred CeEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECC---------------------------EE--EEeCCCC
Confidence 35899999999999 589999999999999999999987521 12 5799999
Q ss_pred EEEeCCC-CeEEEEcCCCCcEEEEEEeecC
Q 039441 435 VFIIPPG-HPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 435 V~vVPaG-~~h~i~n~gne~l~~v~F~~na 463 (539)
+++||+| .+|.+.|.+++++.++++.+.+
T Consensus 95 ~i~i~~~~~~H~~~n~~~~~~~~l~v~~p~ 124 (162)
T 3l2h_A 95 FVGFPCHAAAHSISNDGTETLVCLVIGQRL 124 (162)
T ss_dssp EEEECTTSCCEEEECCSSSCEEEEEEEECC
T ss_pred EEEECCCCceEEeEeCCCCCEEEEEEECCC
Confidence 9999998 9999999999999999887665
No 58
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.95 E-value=3.3e-09 Score=97.36 Aligned_cols=80 Identities=20% Similarity=0.400 Sum_probs=68.7
Q ss_pred CcceeeEEEeeeCCCe-eeccccc-CCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCC-CeEEEEecCCCceEE
Q 039441 197 GIDNYRLAILEANPST-LVVPHHS-DAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAG-TTYYLSNQDNVDRLH 273 (539)
Q Consensus 197 gv~~~Rl~il~l~P~~-l~lPh~~-dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG-~~h~i~N~g~~e~L~ 273 (539)
|...+.+.++++.|++ ...+||| +..+++||++|++.+.+ ...++.|++||+++||+| ++|++.|.+ +++++
T Consensus 42 g~~~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~----~~~~~~l~~Gd~i~i~~~~~~H~~~n~~-~~~~~ 116 (162)
T 3l2h_A 42 GLRHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTM----ENDQYPIAPGDFVGFPCHAAAHSISNDG-TETLV 116 (162)
T ss_dssp TCCSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEE----TTEEEEECTTCEEEECTTSCCEEEECCS-SSCEE
T ss_pred CCCeEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEE----CCEEEEeCCCCEEEECCCCceEEeEeCC-CCCEE
Confidence 6667778888889999 5788988 89999999999999885 235799999999999998 999999998 58888
Q ss_pred EEEEeccC
Q 039441 274 VAKLLQPV 281 (539)
Q Consensus 274 iv~l~d~~ 281 (539)
++.+..+.
T Consensus 117 ~l~v~~p~ 124 (162)
T 3l2h_A 117 CLVIGQRL 124 (162)
T ss_dssp EEEEEECC
T ss_pred EEEEECCC
Confidence 88877653
No 59
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=98.93 E-value=1.6e-09 Score=92.76 Aligned_cols=81 Identities=14% Similarity=0.166 Sum_probs=68.6
Q ss_pred cccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCC
Q 039441 354 QEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPG 433 (539)
Q Consensus 354 ~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~G 433 (539)
.+-.+.|.+++|.||+-...|+|+...++.||+.|++.++. +++ ......|++|
T Consensus 13 en~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~--~d~------------------------~~~~~~l~~G 66 (98)
T 3lag_A 13 DNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--PDG------------------------TRSLAQLKTG 66 (98)
T ss_dssp ESSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--TTS------------------------CEECCCBCTT
T ss_pred cCCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEe--CCC------------------------ceEEEEecCC
Confidence 34468999999999999999999999999999999998754 333 1234679999
Q ss_pred cEEEeCCCCeEEEEcCCCCcEEEEEEe
Q 039441 434 VVFIIPPGHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 434 DV~vVPaG~~h~i~n~gne~l~~v~F~ 460 (539)
|+++||+|..|.+.|.|+.+|.||.+.
T Consensus 67 ~~~~ip~G~~H~~~N~g~~pl~~IeVE 93 (98)
T 3lag_A 67 RSYARKAGVQHDVRNESTAEIVFLEIE 93 (98)
T ss_dssp CCEEECTTCEEEEBCCSSSCEEEEEEE
T ss_pred cEEEEcCCCcEECEECCCCeEEEEEEE
Confidence 999999999999999999999999864
No 60
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=98.92 E-value=6.9e-09 Score=86.27 Aligned_cols=76 Identities=16% Similarity=0.216 Sum_probs=63.4
Q ss_pred eeeEEEeeeCCCeeecccccC-CCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 200 NYRLAILEANPSTLVVPHHSD-AETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~d-A~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
.+.+.++++.|++-.-+|+++ ..+++||++|++.+.+ ....+.|.+||+++||+|++|++.|.+ +++++++.++
T Consensus 27 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~----~~~~~~l~~Gd~~~ip~~~~H~~~~~~-~~~~~~~~v~ 101 (105)
T 1v70_A 27 RMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV----GEEEALLAPGMAAFAPAGAPHGVRNES-ASPALLLVVT 101 (105)
T ss_dssp TEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEE----TTEEEEECTTCEEEECTTSCEEEECCS-SSCEEEEEEE
T ss_pred ceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE----CCEEEEeCCCCEEEECCCCcEEeEeCC-CCCEEEEEEe
Confidence 355666777999988888776 4789999999999876 236899999999999999999999987 4778888777
Q ss_pred cc
Q 039441 279 QP 280 (539)
Q Consensus 279 d~ 280 (539)
.+
T Consensus 102 ~p 103 (105)
T 1v70_A 102 AP 103 (105)
T ss_dssp ES
T ss_pred CC
Confidence 64
No 61
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=98.92 E-value=7.5e-09 Score=87.73 Aligned_cols=78 Identities=15% Similarity=0.244 Sum_probs=64.9
Q ss_pred eeeEEEeeeCCCeeeccc--ccC-CCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEE
Q 039441 200 NYRLAILEANPSTLVVPH--HSD-AETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAK 276 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh--~~d-A~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~ 276 (539)
.+.+.++++.|++...+| +++ ..+++||++|++.+.+ ...++.|++||+++||+|++|++.|.+ +++++++.
T Consensus 20 ~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~----~~~~~~l~~Gd~~~i~~~~~H~~~~~~-~~~~~~~~ 94 (113)
T 2gu9_A 20 QVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIV----DGHTQALQAGSLIAIERGQAHEIRNTG-DTPLKTVN 94 (113)
T ss_dssp TEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEE----TTEEEEECTTEEEEECTTCCEEEECCS-SSCEEEEE
T ss_pred cEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEE----CCEEEEeCCCCEEEECCCCcEEeEcCC-CCCEEEEE
Confidence 445666677999988777 777 8999999999999887 236799999999999999999999987 47788888
Q ss_pred EeccCC
Q 039441 277 LLQPVN 282 (539)
Q Consensus 277 l~d~~n 282 (539)
++.+..
T Consensus 95 v~~~~~ 100 (113)
T 2gu9_A 95 FYHPPA 100 (113)
T ss_dssp EEESCC
T ss_pred EECCCC
Confidence 776543
No 62
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=98.90 E-value=1.2e-08 Score=86.37 Aligned_cols=80 Identities=19% Similarity=0.190 Sum_probs=68.4
Q ss_pred ccceeEEEEEEcCCceecce--ecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCC
Q 039441 355 EIDAGVTYVEINQGGMMVPH--YNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSP 432 (539)
Q Consensus 355 ~l~isva~v~L~pGgm~~PH--whpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~ 432 (539)
.-++.+..+.+.||+...+| ||++..+++||++|++.+.+ ++ +. ..|++
T Consensus 18 ~~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~---~~------------------------~~--~~l~~ 68 (113)
T 2gu9_A 18 LRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIV---DG------------------------HT--QALQA 68 (113)
T ss_dssp ETTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEE---TT------------------------EE--EEECT
T ss_pred CCcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEE---CC------------------------EE--EEeCC
Confidence 34688999999999999988 99779999999999999877 21 12 57999
Q ss_pred CcEEEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 433 GVVFIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 433 GDV~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
||+++||+|.+|.+.|.+++++.++.+...+
T Consensus 69 Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~~ 99 (113)
T 2gu9_A 69 GSLIAIERGQAHEIRNTGDTPLKTVNFYHPP 99 (113)
T ss_dssp TEEEEECTTCCEEEECCSSSCEEEEEEEESC
T ss_pred CCEEEECCCCcEEeEcCCCCCEEEEEEECCC
Confidence 9999999999999999888889988876543
No 63
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.89 E-value=6.1e-09 Score=103.17 Aligned_cols=104 Identities=14% Similarity=0.134 Sum_probs=75.0
Q ss_pred CCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEe-------cCC-CCccchhhhh
Q 039441 337 NNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMG-------GPL-SSRWSQESQR 408 (539)
Q Consensus 337 n~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV-------~p~-gs~~s~~~~~ 408 (539)
+.+|.++.+-. +...+.++++..+.+.||+...||||+++.|+.||++|++.+.+- ... ..+ .
T Consensus 25 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~--~---- 95 (239)
T 2xlg_A 25 TPANEIFDIAS---CSAKDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVG--G---- 95 (239)
T ss_dssp CTTCCEEEEEE---EEETTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTT--T----
T ss_pred cCCceEEEEec---cCCCCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCccccc--c----
Confidence 34555544321 122344688999999999999999999999999999999999771 111 000 0
Q ss_pred hhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEE-EEEe
Q 039441 409 EQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLT-VGFS 460 (539)
Q Consensus 409 g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~-v~F~ 460 (539)
+..-+.....|++||+++||+|.+|.+.|.+++++.+ +.+.
T Consensus 96 -----------~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 96 -----------AGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp -----------TCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEEEE
T ss_pred -----------cccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEE
Confidence 0000345678999999999999999999998888887 5544
No 64
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=98.89 E-value=8.7e-09 Score=96.18 Aligned_cols=80 Identities=8% Similarity=0.158 Sum_probs=68.7
Q ss_pred ceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 199 DNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
..+-+.++++.|++...+||+...+++||++|++.+.+ +..++.|++||+++||+|++|++.|.+.++++++++++
T Consensus 54 ~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i----~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~ 129 (167)
T 3ibm_A 54 PAFETRYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVL----DDRVEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIV 129 (167)
T ss_dssp SSEEEEEEEECTTCBCCCBBCSSCEEEEEEESEEEEEE----TTEEEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEE
T ss_pred CcEEEEEEEECCCCCCCCccCCCcEEEEEEeCEEEEEE----CCEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEE
Confidence 35566777889999999999999999999999999876 23589999999999999999999999844789888888
Q ss_pred ccCC
Q 039441 279 QPVN 282 (539)
Q Consensus 279 d~~n 282 (539)
.+..
T Consensus 130 ~~~~ 133 (167)
T 3ibm_A 130 DSDR 133 (167)
T ss_dssp ESSC
T ss_pred eCCc
Confidence 7643
No 65
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=98.89 E-value=9.9e-09 Score=88.77 Aligned_cols=75 Identities=20% Similarity=0.307 Sum_probs=62.7
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceee-ecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESF-NMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~-~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
.+.+.++++.|++..-+||++..+++||++|++.+.+ + ...+ .|++||+++||+|++|++.|.+ +.++.++.+.
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i---~-~~~~~~l~~Gd~i~ip~~~~H~~~~~~-~~~~~~l~i~ 100 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTL---E-DQEPHNYKEGNIVYVPFNVKMLIQNIN-SDILEFFVVK 100 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECSSCEEEEEEESEEEEEE---T-TSCCEEEETTCEEEECTTCEEEEECCS-SSEEEEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCCCcEEEEEEeCEEEEEE---C-CEEEEEeCCCCEEEECCCCcEEeEcCC-CCCEEEEEEE
Confidence 4455666779999888999999999999999999887 2 2456 9999999999999999999998 4778777764
Q ss_pred c
Q 039441 279 Q 279 (539)
Q Consensus 279 d 279 (539)
.
T Consensus 101 ~ 101 (117)
T 2b8m_A 101 A 101 (117)
T ss_dssp C
T ss_pred C
Confidence 3
No 66
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=98.87 E-value=1.3e-08 Score=96.92 Aligned_cols=81 Identities=21% Similarity=0.228 Sum_probs=68.2
Q ss_pred eeeEEEeeeCCCee------ecccccC---CCcEEEEEeceEEEEEEeC-CCceeeecCCCcEEEeCCCCeEEEEecCCC
Q 039441 200 NYRLAILEANPSTL------VVPHHSD---AETILVLLKGKGVITLVSH-ERRESFNMEHGDVISVPAGTTYYLSNQDNV 269 (539)
Q Consensus 200 ~~Rl~il~l~P~~l------~lPh~~d---A~~~~yV~~G~g~i~~v~p-g~~~~~~v~~GDV~~iPaG~~h~i~N~g~~ 269 (539)
++.+.++++.|++. ..+|||. .++++||++|++.+.+-.. |....+.|++||+++||+|++|++.|.+ +
T Consensus 66 ~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g-~ 144 (190)
T 1x82_A 66 DLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIG-D 144 (190)
T ss_dssp CEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECS-S
T ss_pred CeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECC-c
Confidence 56677778899998 6688774 4799999999999998765 3445799999999999999999999998 5
Q ss_pred ceEEEEEEeccC
Q 039441 270 DRLHVAKLLQPV 281 (539)
Q Consensus 270 e~L~iv~l~d~~ 281 (539)
++++++.++.+.
T Consensus 145 ~~~~~l~v~~~~ 156 (190)
T 1x82_A 145 EPFIFLAIYPAD 156 (190)
T ss_dssp SCEEEEEEEETT
T ss_pred ccEEEEEEECCC
Confidence 789888887654
No 67
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=98.87 E-value=1.3e-08 Score=94.93 Aligned_cols=78 Identities=22% Similarity=0.250 Sum_probs=68.0
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
.++.+..+.|.||+...+||| ...+++||++|++.+.+-. + ...|++||+
T Consensus 54 ~~~~~~~~~l~pG~~~~~H~H-~~~E~~~Vl~G~~~~~i~~---------------------------~--~~~l~~Gd~ 103 (167)
T 3ibm_A 54 PAFETRYFEVEPGGYTTLERH-EHTHVVMVVRGHAEVVLDD---------------------------R--VEPLTPLDC 103 (167)
T ss_dssp SSEEEEEEEECTTCBCCCBBC-SSCEEEEEEESEEEEEETT---------------------------E--EEEECTTCE
T ss_pred CcEEEEEEEECCCCCCCCccC-CCcEEEEEEeCEEEEEECC---------------------------E--EEEECCCCE
Confidence 358899999999999999999 5899999999999987621 1 357999999
Q ss_pred EEeCCCCeEEEEcCC-CCcEEEEEEeecC
Q 039441 436 FIIPPGHPIALVASP-NEKLLTVGFSLNA 463 (539)
Q Consensus 436 ~vVPaG~~h~i~n~g-ne~l~~v~F~~na 463 (539)
++||+|.+|.+.|.+ ++++.++++...+
T Consensus 104 i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 104 VYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp EEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred EEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 999999999999998 8999999876554
No 68
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=98.85 E-value=1.8e-08 Score=87.78 Aligned_cols=76 Identities=16% Similarity=0.192 Sum_probs=63.1
Q ss_pred ceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 199 DNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
..+.+..+++.|++..-+||+..++++||++|++.+.+ . ..++.|++||+++||+|++|++.|.+ +..+.++.++
T Consensus 34 ~~~~v~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i--~--~~~~~l~~Gd~i~ip~~~~H~~~~~~-~~~~~~~~v~ 108 (114)
T 3fjs_A 34 HRLEVMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGV--D--GAQRRLHQGDLLYLGAGAAHDVNAIT-NTSLLVTVVL 108 (114)
T ss_dssp TTEEEEEEEECTTCEEEEECCSSCEEEEEEESCEEEEE--T--TEEEEECTTEEEEECTTCCEEEEESS-SEEEEEEEEC
T ss_pred CCEEEEEEEECCCCccCceeCCCcEEEEEEECEEEEEE--C--CEEEEECCCCEEEECCCCcEEEEeCC-CcEEEEEEEe
Confidence 45667777779999999999999999999999999886 2 24799999999999999999999997 4556555544
Q ss_pred c
Q 039441 279 Q 279 (539)
Q Consensus 279 d 279 (539)
.
T Consensus 109 p 109 (114)
T 3fjs_A 109 V 109 (114)
T ss_dssp C
T ss_pred C
Confidence 3
No 69
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.85 E-value=1.2e-08 Score=86.01 Aligned_cols=79 Identities=19% Similarity=0.241 Sum_probs=67.0
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
.++.+..++|.||+-..+|.|+...+++||++|++.+.+-+. .....|++||+
T Consensus 16 ~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~g---------------------------~~~~~l~~Gd~ 68 (97)
T 2fqp_A 16 ERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPEG---------------------------SVTSQLTRGVS 68 (97)
T ss_dssp SSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETTE---------------------------EEEEEECTTCC
T ss_pred CeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCCC---------------------------CEEEEEcCCCE
Confidence 358899999999999999999877789999999999876321 02357999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEee
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSL 461 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~ 461 (539)
+++|+|.+|.+.|.+++++.+|.+..
T Consensus 69 ~~~p~~~~H~~~N~g~~~~~~l~v~~ 94 (97)
T 2fqp_A 69 YTRPEGVEHNVINPSDTEFVFVEIEI 94 (97)
T ss_dssp EEECTTCEEEEECCSSSCEEEEEEEE
T ss_pred EEeCCCCcccCEeCCCCcEEEEEEEE
Confidence 99999999999999999999987653
No 70
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=98.83 E-value=2.2e-08 Score=90.89 Aligned_cols=83 Identities=13% Similarity=0.197 Sum_probs=65.8
Q ss_pred eeeEEEeeeCCCeeecccccC-CCcEEEEEeceEEEEEEeCCC--ceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEE
Q 039441 200 NYRLAILEANPSTLVVPHHSD-AETILVLLKGKGVITLVSHER--RESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAK 276 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~d-A~~~~yV~~G~g~i~~v~pg~--~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~ 276 (539)
.+.+.++++.|++...+||++ .++++||++|++.+.+-.... ..++.|.+||+++||+|++|++.|.+ +++++++.
T Consensus 42 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~-~~~~~~l~ 120 (148)
T 2oa2_A 42 HLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTG-NRPLKLYS 120 (148)
T ss_dssp SCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECS-SSCEEEEE
T ss_pred ceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECC-CCCEEEEE
Confidence 345666677999988899876 569999999999998743221 12489999999999999999999998 57788888
Q ss_pred EeccCCC
Q 039441 277 LLQPVNT 283 (539)
Q Consensus 277 l~d~~n~ 283 (539)
++.+...
T Consensus 121 i~~~~~~ 127 (148)
T 2oa2_A 121 IYAPPQH 127 (148)
T ss_dssp EEESCCS
T ss_pred EECCCCC
Confidence 7766543
No 71
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=98.83 E-value=3.3e-08 Score=86.27 Aligned_cols=75 Identities=21% Similarity=0.309 Sum_probs=64.2
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEec
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQ 279 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d 279 (539)
.+.+.++++.|++..-+|+|...+++||++|++.+.+ ....+.|.+||+++||+|++|.+.|.++ .++++.++.
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~----~~~~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~~l~v~~ 113 (126)
T 4e2g_A 40 NLMLNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTI----GEETRVLRPGMAYTIPGGVRHRARTFED--GCLVLDIFS 113 (126)
T ss_dssp SCEEEEEEECTTCEEEEECCSSEEEEEEEEECEEEEE----TTEEEEECTTEEEEECTTCCEEEECCTT--CEEEEEEEE
T ss_pred CeEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEE----CCEEEEeCCCCEEEECCCCcEEeEECCC--CEEEEEEEC
Confidence 4566677779999999999999999999999999877 2357999999999999999999999974 577777776
Q ss_pred c
Q 039441 280 P 280 (539)
Q Consensus 280 ~ 280 (539)
+
T Consensus 114 p 114 (126)
T 4e2g_A 114 P 114 (126)
T ss_dssp S
T ss_pred C
Confidence 5
No 72
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=98.83 E-value=2.2e-08 Score=86.51 Aligned_cols=76 Identities=12% Similarity=0.244 Sum_probs=64.9
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEe-eeCCCcE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISA-NLSPGVV 435 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~-~L~~GDV 435 (539)
++.+..+.+.||+...+||| ...+++||++|++.+.+-.. . . .|++||+
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H-~~~e~~~Vl~G~~~~~i~~~---------------------------~--~~~l~~Gd~ 75 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYS-NSYVHLIIIKGEMTLTLEDQ---------------------------E--PHNYKEGNI 75 (117)
T ss_dssp SCEEEEEEEETTCBCCCEEC-SSCEEEEEEESEEEEEETTS---------------------------C--CEEEETTCE
T ss_pred ceEEEEEEECCCCcCCCEeC-CCcEEEEEEeCEEEEEECCE---------------------------E--EEEeCCCCE
Confidence 57788899999999999999 67899999999999887211 1 4 7999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEeec
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSLN 462 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~n 462 (539)
++||+|.+|.+.|.++.++.++.+...
T Consensus 76 i~ip~~~~H~~~~~~~~~~~~l~i~~~ 102 (117)
T 2b8m_A 76 VYVPFNVKMLIQNINSDILEFFVVKAP 102 (117)
T ss_dssp EEECTTCEEEEECCSSSEEEEEEEECS
T ss_pred EEECCCCcEEeEcCCCCCEEEEEEECC
Confidence 999999999999998888888887543
No 73
>2l37_A Ribosome-inactivating protein luffin P1; hydrolase; NMR {Luffa aegyptiaca}
Probab=98.82 E-value=2.9e-09 Score=78.19 Aligned_cols=41 Identities=29% Similarity=0.653 Sum_probs=37.7
Q ss_pred CCchhhHHHHHHHhhhhccchHhHHHHHHHHHHHHhhhhhh
Q 039441 99 RDPKWQHEQCLKQCERRESGEQQQQQCKSWCEKHRQKGQRR 139 (539)
Q Consensus 99 ~~p~~~~~~c~~~c~~~~~~~~~~~~c~~~c~~~~~~~~~~ 139 (539)
.||.++|.+|+++|+.+.++++++.+|+++|+++|++++++
T Consensus 1 ~dP~~el~~C~~~C~~q~q~~eq~q~C~qrCee~y~e~~~~ 41 (43)
T 2l37_A 1 GSPRTEYEACRVRCQVAEHGVERQRRCQQVCEKRLREREGR 41 (43)
T ss_dssp CCCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHCS
T ss_pred CCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHhhcc
Confidence 48999999999999999998898899999999999988754
No 74
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=98.79 E-value=1.4e-08 Score=90.39 Aligned_cols=80 Identities=18% Similarity=0.236 Sum_probs=67.0
Q ss_pred ceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 199 DNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
..+.+.++++.|++...+|||+..+++||++|++.+.+...+ .++.|++||+++||+|++|++.|.+ +++++++.++
T Consensus 37 ~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~~--~~~~l~~Gd~~~ip~~~~H~~~~~~-~~~~~~l~i~ 113 (145)
T 3ht1_A 37 DRFVLTEFEVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPDQG--RTEEVGPGEAIFIPRGEPHGFVTGP-GQTCRFLVVA 113 (145)
T ss_dssp CSEEEEEEEEEEEEECCCEECSSCEEEEEEEECEEEEEGGGT--EEEEECTTCEEEECTTCCBEEECCT-TCCEEEEEEE
T ss_pred CcEEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEEeECC--EEEEECCCCEEEECCCCeEEeEcCC-CCCEEEEEEE
Confidence 456677777799999999999999999999999988742333 6899999999999999999999998 4678877777
Q ss_pred ccC
Q 039441 279 QPV 281 (539)
Q Consensus 279 d~~ 281 (539)
.+.
T Consensus 114 ~~~ 116 (145)
T 3ht1_A 114 PCE 116 (145)
T ss_dssp ESC
T ss_pred CCC
Confidence 543
No 75
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=98.79 E-value=4.3e-08 Score=85.50 Aligned_cols=76 Identities=17% Similarity=0.230 Sum_probs=64.2
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
-++.+..+.+.||+...+|||+. .+++||++|++.+.+ ++ +. ..|++||+
T Consensus 39 ~~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~---~~------------------------~~--~~l~~Gd~ 88 (126)
T 4e2g_A 39 KNLMLNWVRIEPNTEMPAHEHPH-EQAGVMLEGTLELTI---GE------------------------ET--RVLRPGMA 88 (126)
T ss_dssp SSCEEEEEEECTTCEEEEECCSS-EEEEEEEEECEEEEE---TT------------------------EE--EEECTTEE
T ss_pred CCeEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEE---CC------------------------EE--EEeCCCCE
Confidence 36899999999999999999975 899999999999977 21 12 57999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEeec
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSLN 462 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~n 462 (539)
++||+|.+|.+.|.++ ++.++.+.+.
T Consensus 89 ~~ip~~~~H~~~~~~~-~~~~l~v~~p 114 (126)
T 4e2g_A 89 YTIPGGVRHRARTFED-GCLVLDIFSP 114 (126)
T ss_dssp EEECTTCCEEEECCTT-CEEEEEEEES
T ss_pred EEECCCCcEEeEECCC-CEEEEEEECC
Confidence 9999999999999876 6777765543
No 76
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.78 E-value=4.5e-08 Score=92.28 Aligned_cols=77 Identities=8% Similarity=0.040 Sum_probs=62.6
Q ss_pred eeEEEeeeCCCeeec---ccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEec-CCCceEEEEE
Q 039441 201 YRLAILEANPSTLVV---PHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQ-DNVDRLHVAK 276 (539)
Q Consensus 201 ~Rl~il~l~P~~l~l---Ph~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~-g~~e~L~iv~ 276 (539)
+.+.++++.|++... +||++..+++||++|++.+.+=..+....+.|++||.++||+|++|++.|. + +++++++.
T Consensus 117 ~~~~~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~~~~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~-~~~~~~l~ 195 (198)
T 2bnm_A 117 LVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGDKENPKEALLPTGASMFVEEHVPHAFTAAKG-TGSAKLIA 195 (198)
T ss_dssp CEEEEEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEESCTTSCEEEEECTTCEEEECTTCCEEEEESTT-SCCEEEEE
T ss_pred ceEEEEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEECCcCCcccEEECCCCEEEeCCCCceEEEecCC-CCCeEEEE
Confidence 444555569999776 588888999999999999987333344789999999999999999999999 7 47787776
Q ss_pred Ee
Q 039441 277 LL 278 (539)
Q Consensus 277 l~ 278 (539)
++
T Consensus 196 v~ 197 (198)
T 2bnm_A 196 VN 197 (198)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 77
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.78 E-value=2.5e-08 Score=92.53 Aligned_cols=99 Identities=17% Similarity=0.171 Sum_probs=77.7
Q ss_pred CcccCCCceEEEeCCcccccccccceeEEEEEEcCCcee-cceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhh
Q 039441 333 PIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMM-VPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQ 411 (539)
Q Consensus 333 p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~-~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~ 411 (539)
|......|..+..-. +.+....+.+..+.|.||+.. .+|||+...+++||++|++.+.+-.
T Consensus 21 p~~~~~~G~~~~~l~---~~~~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~--------------- 82 (163)
T 3i7d_A 21 RLNAAMDGRSSLRLG---DAGGLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQ--------------- 82 (163)
T ss_dssp GGGGGGTTEEEEEHH---HHTTCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETT---------------
T ss_pred CccccCCCeEEEEcc---cCCCCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECC---------------
Confidence 333455677554432 223334689999999999965 7999987789999999999987622
Q ss_pred HHHHHHhhhcceeeEEeeeCCCcEEEeCCC--CeEEEEcCCCCcEEEEEEeecC
Q 039441 412 EEEEEEESSRELQKISANLSPGVVFIIPPG--HPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 412 ~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG--~~h~i~n~gne~l~~v~F~~na 463 (539)
+ ...|++||+++||+| .+|.+.|.+++++.++++.+.+
T Consensus 83 ------------~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~~p~ 122 (163)
T 3i7d_A 83 ------------G--EHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVGTRT 122 (163)
T ss_dssp ------------E--EEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEEECC
T ss_pred ------------E--EEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEECCC
Confidence 1 257999999999999 9999999999999999887665
No 78
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.78 E-value=1.5e-08 Score=85.48 Aligned_cols=77 Identities=10% Similarity=0.141 Sum_probs=61.2
Q ss_pred ceeeEEEeeeCCCeeecccccCCC-cEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEE
Q 039441 199 DNYRLAILEANPSTLVVPHHSDAE-TILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKL 277 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh~~dA~-~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l 277 (539)
..+.+..+++.|++-.-+|+|..+ +++||++|++.+.+ .++...+.|.+||+++||+|++|++.|.+ +++++++.+
T Consensus 16 ~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~--~~g~~~~~l~~Gd~~~~p~~~~H~~~N~g-~~~~~~l~v 92 (97)
T 2fqp_A 16 ERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLET--PEGSVTSQLTRGVSYTRPEGVEHNVINPS-DTEFVFVEI 92 (97)
T ss_dssp SSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEE--TTEEEEEEECTTCCEEECTTCEEEEECCS-SSCEEEEEE
T ss_pred CeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEe--CCCCEEEEEcCCCEEEeCCCCcccCEeCC-CCcEEEEEE
Confidence 345566667799998778877776 59999999998875 22226889999999999999999999998 467777665
Q ss_pred e
Q 039441 278 L 278 (539)
Q Consensus 278 ~ 278 (539)
-
T Consensus 93 ~ 93 (97)
T 2fqp_A 93 E 93 (97)
T ss_dssp E
T ss_pred E
Confidence 3
No 79
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=98.76 E-value=5.1e-08 Score=90.27 Aligned_cols=78 Identities=19% Similarity=0.305 Sum_probs=67.7
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
.++.+..+.|.||+...+|||+ ..+++||++|++.+.+ . + + ...|++||+
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~v~v-~--g------------------------~--~~~l~~Gd~ 91 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHA-HVHAVMIHRGHGQCLV-G--E------------------------T--ISDVAQGDL 91 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEEEEEEEE-T--T------------------------E--EEEEETTCE
T ss_pred CcEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEE-C--C------------------------E--EEEeCCCCE
Confidence 4688899999999999999995 5799999999999875 2 1 2 257999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
++||+|.+|.+.|.+++++.++++....
T Consensus 92 i~ip~~~~H~~~n~g~~~~~~l~i~~~~ 119 (156)
T 3kgz_A 92 VFIPPMTWHQFRANRGDCLGFLCVVNAA 119 (156)
T ss_dssp EEECTTCCEEEECCSSSCEEEEEEEESS
T ss_pred EEECCCCcEEeEeCCCCCEEEEEEEeCC
Confidence 9999999999999999999999877654
No 80
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=98.75 E-value=4.4e-08 Score=85.77 Aligned_cols=82 Identities=18% Similarity=0.252 Sum_probs=66.3
Q ss_pred ccccceeEEEEEEcCCceec-ceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeC
Q 039441 353 LQEIDAGVTYVEINQGGMMV-PHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLS 431 (539)
Q Consensus 353 L~~l~isva~v~L~pGgm~~-PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~ 431 (539)
+...++.+..+.+.||+... ||||+....+.||++|++.+.+- + +. ..|+
T Consensus 21 ~~~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~---~------------------------~~--~~l~ 71 (125)
T 3cew_A 21 LALTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITID---G------------------------EK--IELQ 71 (125)
T ss_dssp HTCSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEET---T------------------------EE--EEEE
T ss_pred cCCCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEEC---C------------------------EE--EEeC
Confidence 33456888899999999988 89995554566699999998762 1 22 5799
Q ss_pred CCcEEEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 432 PGVVFIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 432 ~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
+||+++||+|.+|.+.|.+++++.++++...+
T Consensus 72 ~Gd~i~i~~~~~H~~~~~~~~~~~~~~i~~~~ 103 (125)
T 3cew_A 72 AGDWLRIAPDGKRQISAASDSPIGFLCIQVKA 103 (125)
T ss_dssp TTEEEEECTTCCEEEEEBTTBCEEEEEEEEET
T ss_pred CCCEEEECCCCcEEEEcCCCCCEEEEEEEcCC
Confidence 99999999999999999888889888776554
No 81
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=98.75 E-value=5.7e-08 Score=85.00 Aligned_cols=77 Identities=12% Similarity=0.201 Sum_probs=66.9
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
..+.+..+.+.||+...+||| +..+++||++|++.+.+ ++ + ...|++||+
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H-~~~Ei~~v~~G~~~~~i---~~------------------------~--~~~l~~Gd~ 81 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSH-NEYELFIVIQGNAIIRI---ND------------------------E--DFPVTKGDL 81 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCC-SSEEEEEEEESEEEEEE---TT------------------------E--EEEEETTCE
T ss_pred CCcEEEEEEECCCCccCCEec-CCeEEEEEEeCEEEEEE---CC------------------------E--EEEECCCcE
Confidence 458889999999999999999 79999999999999877 22 1 257999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEeec
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSLN 462 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~n 462 (539)
++||+|.+|.+.|.+++++.++++..+
T Consensus 82 ~~i~~~~~H~~~~~~~~~~~~~~i~f~ 108 (128)
T 4i4a_A 82 IIIPLDSEHHVINNNQEDFHFYTIWWD 108 (128)
T ss_dssp EEECTTCCEEEEECSSSCEEEEEEEEC
T ss_pred EEECCCCcEEeEeCCCCCEEEEEEEEC
Confidence 999999999999988888888876544
No 82
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=98.75 E-value=4.5e-08 Score=84.06 Aligned_cols=73 Identities=10% Similarity=0.009 Sum_probs=61.6
Q ss_pred eeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEecc
Q 039441 201 YRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQP 280 (539)
Q Consensus 201 ~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~ 280 (539)
+.+..+++.|++..-+|+|+..+++||++|++.+.+ ....+.|.+||+++||+|++|++.|.+ +++++.++.+
T Consensus 34 ~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~----~~~~~~l~~Gd~~~ip~~~~H~~~~~~---~~~~l~v~~p 106 (116)
T 2pfw_A 34 LMAVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNV----DGVIKVLTAGDSFFVPPHVDHGAVCPT---GGILIDTFSP 106 (116)
T ss_dssp EEEEEEEECTTEEEEEECCSSEEEEEEEEECEEEEE----TTEEEEECTTCEEEECTTCCEEEEESS---CEEEEEEEES
T ss_pred eEEEEEEECCCCcCCcEECCcceEEEEEeeEEEEEE----CCEEEEeCCCCEEEECcCCceeeEeCC---CcEEEEEECC
Confidence 556667779999888899999999999999999887 235899999999999999999999987 3566666654
No 83
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.75 E-value=3.5e-08 Score=91.57 Aligned_cols=80 Identities=15% Similarity=0.250 Sum_probs=67.6
Q ss_pred CcceeeEEEeeeCCCeee-cccccCC-CcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCC--CeEEEEecCCCceE
Q 039441 197 GIDNYRLAILEANPSTLV-VPHHSDA-ETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAG--TTYYLSNQDNVDRL 272 (539)
Q Consensus 197 gv~~~Rl~il~l~P~~l~-lPh~~dA-~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG--~~h~i~N~g~~e~L 272 (539)
+...+.+.++++.|++.. .+|||.. ++++||++|++.+.+ ...++.|++||+++||+| ++|++.|.+ ++++
T Consensus 39 ~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~----~~~~~~l~~GD~i~ip~~~~~~H~~~n~~-~~~~ 113 (163)
T 3i7d_A 39 GLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVD----DQGEHPMVPGDCAAFPAGDPNGHQFVNRT-DAPA 113 (163)
T ss_dssp TCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEE----TTEEEEECTTCEEEECTTCCCCBEEECCS-SSCE
T ss_pred CCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEE----CCEEEEeCCCCEEEECCCCCcceEEEECC-CCCE
Confidence 556677888888999966 5887776 799999999999886 225899999999999999 999999998 5788
Q ss_pred EEEEEeccC
Q 039441 273 HVAKLLQPV 281 (539)
Q Consensus 273 ~iv~l~d~~ 281 (539)
+++.+..+.
T Consensus 114 ~~l~v~~p~ 122 (163)
T 3i7d_A 114 TFLVVGTRT 122 (163)
T ss_dssp EEEEEEECC
T ss_pred EEEEEECCC
Confidence 888888754
No 84
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=98.75 E-value=4.2e-08 Score=87.23 Aligned_cols=80 Identities=20% Similarity=0.321 Sum_probs=66.6
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
.++.+..+.+.||+...+|||+ ..+++||++|++.+.+...+ + ...|++||+
T Consensus 37 ~~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~~~-------------------------~--~~~l~~Gd~ 88 (145)
T 3ht1_A 37 DRFVLTEFEVSPNGSTPPHFHE-WEHEIYVLEGSMGLVLPDQG-------------------------R--TEEVGPGEA 88 (145)
T ss_dssp CSEEEEEEEEEEEEECCCEECS-SCEEEEEEEECEEEEEGGGT-------------------------E--EEEECTTCE
T ss_pred CcEEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEEeECC-------------------------E--EEEECCCCE
Confidence 3688999999999999999995 56778999999998742222 1 257999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
++||+|.+|.+.|.+++++.++.+...+
T Consensus 89 ~~ip~~~~H~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 89 IFIPRGEPHGFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp EEECTTCCBEEECCTTCCEEEEEEEESC
T ss_pred EEECCCCeEEeEcCCCCCEEEEEEECCC
Confidence 9999999999999988899988876554
No 85
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.75 E-value=3.4e-08 Score=88.14 Aligned_cols=75 Identities=15% Similarity=0.201 Sum_probs=65.1
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
.+.+..+.+.||+...+|||+...+++||++|++.+.+- + + ...|++||++
T Consensus 56 ~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~---~------------------------~--~~~l~~Gd~i 106 (133)
T 1o4t_A 56 ARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDN---G------------------------K--DVPIKAGDVC 106 (133)
T ss_dssp EEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEET---T------------------------E--EEEEETTEEE
T ss_pred eEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEEC---C------------------------E--EEEeCCCcEE
Confidence 467889999999999999997789999999999998762 1 1 2579999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEEEe
Q 039441 437 IIPPGHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~F~ 460 (539)
+||+|.+|.+.|.+++++.++++.
T Consensus 107 ~i~~~~~H~~~n~~~~~~~~l~v~ 130 (133)
T 1o4t_A 107 FTDSGESHSIENTGNTDLEFLAVI 130 (133)
T ss_dssp EECTTCEEEEECCSSSCEEEEEEE
T ss_pred EECCCCcEEeEECCCCCEEEEEEE
Confidence 999999999999988899888764
No 86
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=98.75 E-value=2.7e-08 Score=92.09 Aligned_cols=78 Identities=12% Similarity=0.141 Sum_probs=66.9
Q ss_pred ceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 199 DNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
..+-+.++++.|++..-+||++..+++||++|++.+.+ +.+++.|.+||+++||+|++|.+.|.+ ++++++++++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~v----~g~~~~l~~Gd~i~ip~~~~H~~~n~g-~~~~~~l~i~ 116 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHAHVHAVMIHRGHGQCLV----GETISDVAQGDLVFIPPMTWHQFRANR-GDCLGFLCVV 116 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSSCEEEEEEEEEEEEEE----TTEEEEEETTCEEEECTTCCEEEECCS-SSCEEEEEEE
T ss_pred CcEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEE----CCEEEEeCCCCEEEECCCCcEEeEeCC-CCCEEEEEEE
Confidence 34556666779999999999999999999999999986 235899999999999999999999998 5889888888
Q ss_pred ccC
Q 039441 279 QPV 281 (539)
Q Consensus 279 d~~ 281 (539)
...
T Consensus 117 ~~~ 119 (156)
T 3kgz_A 117 NAA 119 (156)
T ss_dssp ESS
T ss_pred eCC
Confidence 643
No 87
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=98.73 E-value=3.2e-08 Score=92.57 Aligned_cols=77 Identities=14% Similarity=0.176 Sum_probs=66.5
Q ss_pred ceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 199 DNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
..+-+.++++.|++...+||+...+++||++|++.+.+ +..++.|.+||+++||+|++|++.|.+ +++++++++.
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~v----~g~~~~l~~GD~i~ip~g~~H~~~n~~-~~~~~~l~i~ 125 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQHAHGVMILKGRGHAMV----GRAVSAVAPYDLVTIPGWSWHQFRAPA-DEALGFLCMV 125 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSSCEEEEEEEECEEEEE----TTEEEEECTTCEEEECTTCCEEEECCT-TSCEEEEEEE
T ss_pred CeEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEE----CCEEEEeCCCCEEEECCCCcEEeEeCC-CCCEEEEEEE
Confidence 34556667789999999999999999999999999876 235899999999999999999999998 5888888877
Q ss_pred cc
Q 039441 279 QP 280 (539)
Q Consensus 279 d~ 280 (539)
.+
T Consensus 126 ~~ 127 (166)
T 3jzv_A 126 NA 127 (166)
T ss_dssp ES
T ss_pred cc
Confidence 64
No 88
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=98.73 E-value=7.4e-08 Score=90.12 Aligned_cols=78 Identities=18% Similarity=0.222 Sum_probs=67.4
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
.++.+..+.|.||+...+|||+ ..+++||++|++.+.+ ++ + ...|++||+
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~~v---~g------------------------~--~~~l~~GD~ 100 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQ-HAHGVMILKGRGHAMV---GR------------------------A--VSAVAPYDL 100 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEECEEEEE---TT------------------------E--EEEECTTCE
T ss_pred CeEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEE---CC------------------------E--EEEeCCCCE
Confidence 4688899999999999999996 5799999999999865 21 2 257999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
++||+|.+|.+.|.+++++.++++....
T Consensus 101 i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 128 (166)
T 3jzv_A 101 VTIPGWSWHQFRAPADEALGFLCMVNAE 128 (166)
T ss_dssp EEECTTCCEEEECCTTSCEEEEEEEESS
T ss_pred EEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 9999999999999999999999876554
No 89
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=98.72 E-value=5.8e-08 Score=84.91 Aligned_cols=73 Identities=19% Similarity=0.409 Sum_probs=60.8
Q ss_pred eeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 201 YRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 201 ~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
+.+..+++.|+....|||++..+++||++|++.+.+ +..++.|++||++.||+|++|++.|.+ ++++.++.+.
T Consensus 34 ~~~~~~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~i----~~~~~~l~~Gd~~~i~~~~~H~~~~~~-~~~~~~~~i~ 106 (128)
T 4i4a_A 34 FGGAWCIVRPETKSFRHSHNEYELFIVIQGNAIIRI----NDEDFPVTKGDLIIIPLDSEHHVINNN-QEDFHFYTIW 106 (128)
T ss_dssp SEEEEEEECTTEECCCBCCSSEEEEEEEESEEEEEE----TTEEEEEETTCEEEECTTCCEEEEECS-SSCEEEEEEE
T ss_pred cEEEEEEECCCCccCCEecCCeEEEEEEeCEEEEEE----CCEEEEECCCcEEEECCCCcEEeEeCC-CCCEEEEEEE
Confidence 334445559999999999999999999999999887 335899999999999999999999987 4666665544
No 90
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=98.71 E-value=1.7e-08 Score=86.29 Aligned_cols=76 Identities=13% Similarity=0.216 Sum_probs=58.9
Q ss_pred eeeEEEeeeCCCeeecccccCCC-cEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEE
Q 039441 200 NYRLAILEANPSTLVVPHHSDAE-TILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKL 277 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~-~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l 277 (539)
.+|+.-++++|++-+-.|+|..+ ++.||+.|+++|.. ..+......+.+||.++||+|+.|++.|.| +.+|+||-+
T Consensus 16 ~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~-~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g-~~pl~~IeV 92 (98)
T 3lag_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA-PDGTRSLAQLKTGRSYARKAGVQHDVRNES-TAEIVFLEI 92 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC-TTSCEECCCBCTTCCEEECTTCEEEEBCCS-SSCEEEEEE
T ss_pred eEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEe-CCCceEEEEecCCcEEEEcCCCcEECEECC-CCeEEEEEE
Confidence 45556666699999988866555 66677799988754 223345788999999999999999999999 688988765
No 91
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.70 E-value=8.4e-08 Score=87.33 Aligned_cols=97 Identities=24% Similarity=0.316 Sum_probs=76.0
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
.++.+..+.+.||+...+|||+. .+++||++|++.+.+=.. . ...|.+||+
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~~~---------------------------~-~~~l~~Gd~ 96 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQERGK---------------------------P-ARILKKGDV 96 (147)
T ss_dssp SSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEETTS---------------------------C-CEEEETTCE
T ss_pred CcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEECCE---------------------------E-EEEECCCCE
Confidence 36889999999999999999965 899999999999875221 1 146999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEeecCCCCccccccccchhcccCcHHHHHH
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSLNARNNQRNFLAGKINIMNQVERETMEV 488 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~na~n~~~~fLAG~~svL~~~p~evLa~ 488 (539)
++||+|.+|++.|.++.++.++++....... ...||..+..+....
T Consensus 97 i~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~-------~~~wl~~v~~e~~~~ 142 (147)
T 2f4p_A 97 VEIPPNVVHWHGAAPDEELVHIGISTQVHLG-------PAEWLGSVTEEEYRK 142 (147)
T ss_dssp EEECTTCCEEEEEBTTBCEEEEEEECCGGGC-------CCEECCCCCHHHHHH
T ss_pred EEECCCCcEEeEeCCCCCEEEEEEEccCCCC-------CceecccCCHHHhhh
Confidence 9999999999999988899998876553111 135666666665544
No 92
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=98.70 E-value=6.5e-08 Score=85.58 Aligned_cols=74 Identities=14% Similarity=0.328 Sum_probs=59.9
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEec
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQ 279 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d 279 (539)
.+-+.++++.|++-. +.|.+.++++||++|++.+.+ + .+++.|++||+++||+|+.|++.|.+ +.++++.+..
T Consensus 39 ~~~~~~~~~~pG~~~-~~H~~~~E~~~Vl~G~~~~~~---~-g~~~~l~~GD~v~ip~g~~H~~~~~~--~~~~~l~v~~ 111 (119)
T 3lwc_A 39 PITIGYGRYAPGQSL-TETMAVDDVMIVLEGRLSVST---D-GETVTAGPGEIVYMPKGETVTIRSHE--EGALTAYVTY 111 (119)
T ss_dssp CCEEEEEEECTTCEE-EEECSSEEEEEEEEEEEEEEE---T-TEEEEECTTCEEEECTTCEEEEEEEE--EEEEEEEEEE
T ss_pred CEEEEEEEECCCCCc-CccCCCCEEEEEEeCEEEEEE---C-CEEEEECCCCEEEECCCCEEEEEcCC--CCeEEEEEEC
Confidence 455667777999855 444599999999999999988 2 36889999999999999999998875 5666777665
Q ss_pred c
Q 039441 280 P 280 (539)
Q Consensus 280 ~ 280 (539)
|
T Consensus 112 P 112 (119)
T 3lwc_A 112 P 112 (119)
T ss_dssp C
T ss_pred C
Confidence 4
No 93
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=98.69 E-value=4.9e-08 Score=86.05 Aligned_cols=79 Identities=9% Similarity=0.171 Sum_probs=67.1
Q ss_pred ccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCc
Q 039441 355 EIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGV 434 (539)
Q Consensus 355 ~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GD 434 (539)
..++.+..+.+.||+...+|||+ ..+++||++|++.+.+- + +. ..|++||
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~---~------------------------~~--~~l~~Gd 94 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHP-WEHEIFVLKGKLTVLKE---Q------------------------GE--ETVEEGF 94 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCS-SCEEEEEEESEEEEECS---S------------------------CE--EEEETTE
T ss_pred CCCEEEEEEEECCCCcCCceeCC-CcEEEEEEEeEEEEEEC---C------------------------EE--EEECCCC
Confidence 34688999999999999999995 88999999999988752 1 12 5799999
Q ss_pred EEEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 435 VFIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 435 V~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
+++||+|.+|.+.|.+++++.++++...+
T Consensus 95 ~i~ip~g~~H~~~~~~~~~~~~l~v~~~~ 123 (126)
T 1vj2_A 95 YIFVEPNEIHGFRNDTDSEVEFLCLIPKE 123 (126)
T ss_dssp EEEECTTCCEEEECCSSSCEEEEEEEEGG
T ss_pred EEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 99999999999999888889988876543
No 94
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.69 E-value=2e-07 Score=87.86 Aligned_cols=81 Identities=14% Similarity=0.118 Sum_probs=66.8
Q ss_pred cccceeEEEEEEcCCceec---ceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeee
Q 039441 354 QEIDAGVTYVEINQGGMMV---PHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANL 430 (539)
Q Consensus 354 ~~l~isva~v~L~pGgm~~---PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L 430 (539)
....+.+..+.|.||+... +|||+. .+++||++|++.+.+-..+. .-...|
T Consensus 113 ~~~~~~~~~~~~~pg~~~~~~~~h~h~~-~E~~~Vl~G~~~~~~~~~~~-------------------------~~~~~l 166 (198)
T 2bnm_A 113 RAPSLVPLVVDVLTDNPDDAKFNSGHAG-NEFLFVLEGEIHMKWGDKEN-------------------------PKEALL 166 (198)
T ss_dssp TSTTCEEEEEEECCCCGGGCCCCCCCSS-CEEEEEEESCEEEEESCTTS-------------------------CEEEEE
T ss_pred CCCcceEEEEEEcCCCCCcccccccCCC-eEEEEEEeeeEEEEECCcCC-------------------------cccEEE
Confidence 3456889999999999987 588855 89999999999998744211 233689
Q ss_pred CCCcEEEeCCCCeEEEEcC-CCCcEEEEEEe
Q 039441 431 SPGVVFIIPPGHPIALVAS-PNEKLLTVGFS 460 (539)
Q Consensus 431 ~~GDV~vVPaG~~h~i~n~-gne~l~~v~F~ 460 (539)
++||.++||++.+|.+.|. +++++.++++.
T Consensus 167 ~~GD~~~~~~~~~H~~~n~~~~~~~~~l~v~ 197 (198)
T 2bnm_A 167 PTGASMFVEEHVPHAFTAAKGTGSAKLIAVN 197 (198)
T ss_dssp CTTCEEEECTTCCEEEEESTTSCCEEEEEEE
T ss_pred CCCCEEEeCCCCceEEEecCCCCCeEEEEEe
Confidence 9999999999999999998 88899888754
No 95
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.69 E-value=5.1e-08 Score=101.53 Aligned_cols=77 Identities=14% Similarity=0.141 Sum_probs=67.9
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
.+.+..+.|.||+...|||| ...+|.||++|+|.++.|+. +. ..|++||+|
T Consensus 99 ~l~~~~~~l~PG~~~~~H~H-~~~e~~yVl~G~g~~t~v~g--------------------------~~--~~l~~GD~~ 149 (354)
T 2d40_A 99 TLYAGLQLIMPGEVAPSHRH-NQSALRFIVEGKGAFTAVDG--------------------------ER--TPMNEGDFI 149 (354)
T ss_dssp SCEEEEEEECTTCEEEEEEE-SSCEEEEEEECSSCEEEETT--------------------------EE--EECCTTCEE
T ss_pred cEEEEEEEECCCCCcCCeec-CcceEEEEEEEEEEEEEECC--------------------------EE--EEEcCCCEE
Confidence 58899999999999999999 57799999999999877754 23 579999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEEEeec
Q 039441 437 IIPPGHPIALVASPNEKLLTVGFSLN 462 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~F~~n 462 (539)
+||+|.+|.+.|.+++++.|++|.+.
T Consensus 150 ~iP~g~~H~~~n~~~~~~~~l~v~d~ 175 (354)
T 2d40_A 150 LTPQWRWHDHGNPGDEPVIWLDGLDL 175 (354)
T ss_dssp EECTTSCEEEECCSSSCEEEEEEECH
T ss_pred EECCCCcEEeEeCCCCCEEEEEEECc
Confidence 99999999999999999999987643
No 96
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=98.69 E-value=9.7e-08 Score=83.55 Aligned_cols=79 Identities=16% Similarity=0.227 Sum_probs=63.3
Q ss_pred ceeeEEEeeeCCCeeec-ccccCCCcEEE-EEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEE
Q 039441 199 DNYRLAILEANPSTLVV-PHHSDAETILV-LLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAK 276 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~l-Ph~~dA~~~~y-V~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~ 276 (539)
..+.+.++++.|++... |||++..+++| |++|++.+.+ ....+.|++||+++||+|++|++.|.+ ++++.++.
T Consensus 24 ~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i----~~~~~~l~~Gd~i~i~~~~~H~~~~~~-~~~~~~~~ 98 (125)
T 3cew_A 24 TGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITI----DGEKIELQAGDWLRIAPDGKRQISAAS-DSPIGFLC 98 (125)
T ss_dssp SSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEE----TTEEEEEETTEEEEECTTCCEEEEEBT-TBCEEEEE
T ss_pred CCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEE----CCEEEEeCCCCEEEECCCCcEEEEcCC-CCCEEEEE
Confidence 44556667779999886 79888776555 9999999887 236799999999999999999999987 46787777
Q ss_pred EeccCC
Q 039441 277 LLQPVN 282 (539)
Q Consensus 277 l~d~~n 282 (539)
+..+.+
T Consensus 99 i~~~~~ 104 (125)
T 3cew_A 99 IQVKAG 104 (125)
T ss_dssp EEEETT
T ss_pred EEcCCc
Confidence 665544
No 97
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=98.68 E-value=4.8e-08 Score=86.13 Aligned_cols=76 Identities=20% Similarity=0.243 Sum_probs=62.9
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEec
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQ 279 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d 279 (539)
.+.+.++++.|++...+|+++..+++||++|++.+.+ . ..++.|.+||+++||+|++|++.|.+ ++++.++.++.
T Consensus 47 ~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i--~--~~~~~l~~Gd~i~ip~g~~H~~~~~~-~~~~~~l~v~~ 121 (126)
T 1vj2_A 47 NFVMRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLK--E--QGEETVEEGFYIFVEPNEIHGFRNDT-DSEVEFLCLIP 121 (126)
T ss_dssp SEEEEEEEEEEEEEEEEECCSSCEEEEEEESEEEEEC--S--SCEEEEETTEEEEECTTCCEEEECCS-SSCEEEEEEEE
T ss_pred CEEEEEEEECCCCcCCceeCCCcEEEEEEEeEEEEEE--C--CEEEEECCCCEEEECCCCcEEeEeCC-CCCEEEEEEEc
Confidence 3445566669999888999999999999999998876 2 35789999999999999999999987 46777776664
Q ss_pred c
Q 039441 280 P 280 (539)
Q Consensus 280 ~ 280 (539)
+
T Consensus 122 ~ 122 (126)
T 1vj2_A 122 K 122 (126)
T ss_dssp G
T ss_pred c
Confidence 3
No 98
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=98.68 E-value=4.1e-08 Score=84.17 Aligned_cols=81 Identities=15% Similarity=0.178 Sum_probs=64.0
Q ss_pred ccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCc
Q 039441 355 EIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGV 434 (539)
Q Consensus 355 ~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GD 434 (539)
+-.+.+..++|.||+....|.|+....|+|+++|++.+ ...++ ......|++||
T Consensus 14 ~~~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~--~~~dG------------------------~~~~~~l~aGd 67 (98)
T 2ozi_A 14 NDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTI--VAPDG------------------------TRSLAQLKTGR 67 (98)
T ss_dssp SSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CE--ECTTS------------------------CEECCCBCTTC
T ss_pred CCcEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEE--EeCCC------------------------cEEEEEECCCC
Confidence 44689999999999999989887665555666666654 45554 11235799999
Q ss_pred EEEeCCCCeEEEEcCCCCcEEEEEEee
Q 039441 435 VFIIPPGHPIALVASPNEKLLTVGFSL 461 (539)
Q Consensus 435 V~vVPaG~~h~i~n~gne~l~~v~F~~ 461 (539)
++++|+|.+|++.|.++.++.||++..
T Consensus 68 ~~~~p~G~~H~~~N~g~~~l~fi~vE~ 94 (98)
T 2ozi_A 68 SYARKAGVQHDVRNESTAEIVFLEIEL 94 (98)
T ss_dssp CEEECTTCEEEEEECSSSCEEEEEEEE
T ss_pred EEEECCCCceeCEECCCCCEEEEEEEE
Confidence 999999999999999999999998754
No 99
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.68 E-value=1.9e-07 Score=83.24 Aligned_cols=73 Identities=21% Similarity=0.286 Sum_probs=61.0
Q ss_pred eeEEEeeeCCCeeecccccC-CCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 201 YRLAILEANPSTLVVPHHSD-AETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 201 ~Rl~il~l~P~~l~lPh~~d-A~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
+-+..+++.|++-..||+++ ..+++||++|++.+.+ ...++.|.+||+++||+|++|++.|.+ +++++++.+.
T Consensus 57 ~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i----~~~~~~l~~Gd~i~i~~~~~H~~~n~~-~~~~~~l~v~ 130 (133)
T 1o4t_A 57 RLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHD----NGKDVPIKAGDVCFTDSGESHSIENTG-NTDLEFLAVI 130 (133)
T ss_dssp EEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEE----TTEEEEEETTEEEEECTTCEEEEECCS-SSCEEEEEEE
T ss_pred EEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEE----CCEEEEeCCCcEEEECCCCcEEeEECC-CCCEEEEEEE
Confidence 34556677999988888886 6999999999999876 236899999999999999999999998 4677776654
No 100
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=98.67 E-value=1.2e-07 Score=81.15 Aligned_cols=64 Identities=20% Similarity=0.432 Sum_probs=55.9
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecC
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQD 267 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g 267 (539)
.+.+.++++.|++..-+|+++..+++||++|++.+.+ . ...+.|.+||+++||+|++|++.|.+
T Consensus 39 ~~~~~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~~--~--~~~~~l~~Gd~~~ip~~~~H~~~~~~ 102 (115)
T 1yhf_A 39 DLGITVFSLDKGQEIGRHSSPGDAMVTILSGLAEITI--D--QETYRVAEGQTIVMPAGIPHALYAVE 102 (115)
T ss_dssp TEEEEEEEECTTCEEEEECCSSEEEEEEEESEEEEEE--T--TEEEEEETTCEEEECTTSCEEEEESS
T ss_pred ceEEEEEEECCCCccCCEECCCcEEEEEEeCEEEEEE--C--CEEEEECCCCEEEECCCCCEEEEECC
Confidence 3456667779999988999999999999999999876 2 25789999999999999999999987
No 101
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=98.67 E-value=3.7e-07 Score=78.23 Aligned_cols=74 Identities=16% Similarity=0.160 Sum_probs=62.1
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
++.+..+.+.||+...+|||+ ..+++||++|++.+.+ ++ + ...|.+||++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~---~~------------------------~--~~~l~~Gd~~ 82 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNV---DG------------------------V--IKVLTAGDSF 82 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEE---TT------------------------E--EEEECTTCEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEE---CC------------------------E--EEEeCCCCEE
Confidence 478899999999999999996 8999999999999887 22 2 2579999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEEEeec
Q 039441 437 IIPPGHPIALVASPNEKLLTVGFSLN 462 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~F~~n 462 (539)
+||+|.+|.+.|.+ +..++.+...
T Consensus 83 ~ip~~~~H~~~~~~--~~~~l~v~~p 106 (116)
T 2pfw_A 83 FVPPHVDHGAVCPT--GGILIDTFSP 106 (116)
T ss_dssp EECTTCCEEEEESS--CEEEEEEEES
T ss_pred EECcCCceeeEeCC--CcEEEEEECC
Confidence 99999999999986 4666665543
No 102
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.66 E-value=8.5e-08 Score=90.18 Aligned_cols=75 Identities=8% Similarity=0.105 Sum_probs=60.7
Q ss_pred eeeEEEeeeCCCeeec--ccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEE
Q 039441 200 NYRLAILEANPSTLVV--PHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKL 277 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~l--Ph~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l 277 (539)
.+.+.++++.|++... +||++..+++||++|++.+.+ +-+++.|++||+++||+|++|++.|.++ +++ ++.+
T Consensus 103 ~~~~~~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~----~~~~~~l~~GD~i~i~~~~~H~~~n~~~-~~~-~l~v 176 (192)
T 1y9q_A 103 GLEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFF----DEQWHELQQGEHIRFFSDQPHGYAAVTE-KAV-FQNI 176 (192)
T ss_dssp TEEEEEEEECTTCEEEECCCSTTCEEEEEEEESCEEEEE----TTEEEEECTTCEEEEECSSSEEEEESSS-CEE-EEEE
T ss_pred cEEEEEEEECCCCCccCCCCCCCCEEEEEEEEeEEEEEE----CCEEEEeCCCCEEEEcCCCCeEeECCCC-CcE-EEEE
Confidence 3445556669998765 667788999999999999877 2468999999999999999999999984 677 6666
Q ss_pred ecc
Q 039441 278 LQP 280 (539)
Q Consensus 278 ~d~ 280 (539)
+.+
T Consensus 177 ~~~ 179 (192)
T 1y9q_A 177 VAY 179 (192)
T ss_dssp EEC
T ss_pred Eec
Confidence 654
No 103
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.66 E-value=1.1e-07 Score=86.43 Aligned_cols=77 Identities=17% Similarity=0.251 Sum_probs=63.3
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEec
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQ 279 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d 279 (539)
.+.+.++++.|++...+|+++..+++||++|++.+.+ ++...+.|.+||+++||+|++|++.|.+ +.++.++.++.
T Consensus 47 ~~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~---~~~~~~~l~~Gd~i~ip~~~~H~~~n~~-~~~~~~l~v~~ 122 (147)
T 2f4p_A 47 NTQVYDVVFEPGARTHWHSHPGGQILIVTRGKGFYQE---RGKPARILKKGDVVEIPPNVVHWHGAAP-DEELVHIGIST 122 (147)
T ss_dssp SCEEEEEEECTTCEECSEECTTCEEEEEEEEEEEEEE---TTSCCEEEETTCEEEECTTCCEEEEEBT-TBCEEEEEEEC
T ss_pred cEEEEEEEECCCCccCceECCCceEEEEEeCEEEEEE---CCEEEEEECCCCEEEECCCCcEEeEeCC-CCCEEEEEEEc
Confidence 3445556669999888999999999999999999876 2222489999999999999999999998 57788777776
Q ss_pred c
Q 039441 280 P 280 (539)
Q Consensus 280 ~ 280 (539)
+
T Consensus 123 ~ 123 (147)
T 2f4p_A 123 Q 123 (147)
T ss_dssp C
T ss_pred c
Confidence 4
No 104
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=98.64 E-value=9.9e-08 Score=83.10 Aligned_cols=72 Identities=18% Similarity=0.225 Sum_probs=60.2
Q ss_pred ccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCc
Q 039441 355 EIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGV 434 (539)
Q Consensus 355 ~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GD 434 (539)
.-++.+.++.|.||+...+|||+. .+++||++|++.+.+= + + +..|++||
T Consensus 33 ~~~~~v~~~~l~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i~---~------------------------~--~~~l~~Gd 82 (114)
T 3fjs_A 33 EHRLEVMRMVLPAGKQVGSHSVAG-PSTIQCLEGEVEIGVD---G------------------------A--QRRLHQGD 82 (114)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSS-CEEEEEEESCEEEEET---T------------------------E--EEEECTTE
T ss_pred CCCEEEEEEEECCCCccCceeCCC-cEEEEEEECEEEEEEC---C------------------------E--EEEECCCC
Confidence 446899999999999999999965 6999999999998762 1 1 36799999
Q ss_pred EEEeCCCCeEEEEcCCCCcEEE
Q 039441 435 VFIIPPGHPIALVASPNEKLLT 456 (539)
Q Consensus 435 V~vVPaG~~h~i~n~gne~l~~ 456 (539)
+++||+|.+|.+.|.++..+.+
T Consensus 83 ~i~ip~~~~H~~~~~~~~~~~~ 104 (114)
T 3fjs_A 83 LLYLGAGAAHDVNAITNTSLLV 104 (114)
T ss_dssp EEEECTTCCEEEEESSSEEEEE
T ss_pred EEEECCCCcEEEEeCCCcEEEE
Confidence 9999999999999986544433
No 105
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=98.62 E-value=1.2e-07 Score=83.84 Aligned_cols=76 Identities=13% Similarity=0.146 Sum_probs=56.0
Q ss_pred eEEEeeeCCCeeecccccCC-CcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEecc
Q 039441 202 RLAILEANPSTLVVPHHSDA-ETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQP 280 (539)
Q Consensus 202 Rl~il~l~P~~l~lPh~~dA-~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~ 280 (539)
.++.+.+.|++...+|||+. .+++||++|++.+.+- + ...+.|++||+++||+|++|++.|.++ .++++.++.+
T Consensus 44 ~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~--~-~~~~~l~~Gd~~~ip~g~~H~~~~~~~--~~~~l~~~~p 118 (134)
T 2o8q_A 44 HVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYE--D-IGAVMLEAGGSAFQPPGVRHRELRHSD--DLEVLEIVSP 118 (134)
T ss_dssp EEEEECC-----CCCEEECCSCEEEEEEESEEEEEET--T-TEEEEEETTCEEECCTTCCEEEEEECT--TCEEEEEESS
T ss_pred EEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEEC--C-cEEEEecCCCEEEECCCCcEEeEeCCC--CeEEEEEECC
Confidence 34444445888888898886 9999999999998772 2 278999999999999999999999874 3577767765
Q ss_pred CC
Q 039441 281 VN 282 (539)
Q Consensus 281 ~n 282 (539)
..
T Consensus 119 ~~ 120 (134)
T 2o8q_A 119 AG 120 (134)
T ss_dssp TT
T ss_pred Cc
Confidence 43
No 106
>2l37_A Ribosome-inactivating protein luffin P1; hydrolase; NMR {Luffa aegyptiaca}
Probab=98.62 E-value=4e-08 Score=72.09 Aligned_cols=34 Identities=29% Similarity=0.756 Sum_probs=30.9
Q ss_pred CChHHHHHHHHHHHHHH-------HHHHHHHHHHHHHhhCC
Q 039441 45 QDPEEEYKQCKQLCEKQ-------EAVQRRCERHYKEQQGG 78 (539)
Q Consensus 45 ~dp~~~~~~c~~~c~~q-------~~c~~~ce~~~~~~~~~ 78 (539)
.||+++|++|+++|+.+ ++|+++|+++|++++++
T Consensus 1 ~dP~~el~~C~~~C~~q~q~~eq~q~C~qrCee~y~e~~~~ 41 (43)
T 2l37_A 1 GSPRTEYEACRVRCQVAEHGVERQRRCQQVCEKRLREREGR 41 (43)
T ss_dssp CCCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHCS
T ss_pred CCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHhhcc
Confidence 49999999999999987 39999999999998854
No 107
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=98.62 E-value=9.9e-08 Score=81.78 Aligned_cols=78 Identities=15% Similarity=0.236 Sum_probs=59.3
Q ss_pred ceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCc-eeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEE
Q 039441 199 DNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERR-ESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKL 277 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~-~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l 277 (539)
..+|+..+++.|++-.-.|.|..+ ..+|.-++|.+.+...++. ....|++||++++|+|+.|++.|.+ +++|+++.+
T Consensus 15 ~~v~v~~~~l~PG~~~~~H~H~~~-~~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g-~~~l~fi~v 92 (98)
T 2ozi_A 15 DEVRVTEWRLPPGSATGHHTHGMD-YVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNES-TAEIVFLEI 92 (98)
T ss_dssp SSEEEEEEEECTTEECCSEECCSC-EEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEEECS-SSCEEEEEE
T ss_pred CcEEEEEEEECCCCccCcEeCCCC-EEEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCceeCEECC-CCCEEEEEE
Confidence 356777788899998755545444 4445556666667776766 5789999999999999999999999 578988876
Q ss_pred e
Q 039441 278 L 278 (539)
Q Consensus 278 ~ 278 (539)
-
T Consensus 93 E 93 (98)
T 2ozi_A 93 E 93 (98)
T ss_dssp E
T ss_pred E
Confidence 4
No 108
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.61 E-value=4.9e-07 Score=76.35 Aligned_cols=75 Identities=17% Similarity=0.289 Sum_probs=60.1
Q ss_pred ccceeEEEEEEcCCceecceecCCCCEE-EEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCC
Q 039441 355 EIDAGVTYVEINQGGMMVPHYNSKATTI-VLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPG 433 (539)
Q Consensus 355 ~l~isva~v~L~pGgm~~PHwhpnA~ei-~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~G 433 (539)
+-++.+..+.+.||+...+|||+...++ +||++|++.+.+-. + +. ..|.+|
T Consensus 30 ~~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~--~------------------------~~--~~l~~G 81 (110)
T 2q30_A 30 SENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDG--D------------------------AV--IPAPRG 81 (110)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGG--G------------------------CE--EEECTT
T ss_pred CCCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCC--C------------------------EE--EEECCC
Confidence 3457888999999999999999766788 89999999886521 1 12 579999
Q ss_pred cEEEeCCCCeEEEEcCCCCcEEEEEE
Q 039441 434 VVFIIPPGHPIALVASPNEKLLTVGF 459 (539)
Q Consensus 434 DV~vVPaG~~h~i~n~gne~l~~v~F 459 (539)
|+++||+|.+|.+.|.++ ..++.+
T Consensus 82 d~~~ip~~~~H~~~~~~~--~~~l~~ 105 (110)
T 2q30_A 82 AVLVAPISTPHGVRAVTD--MKVLVT 105 (110)
T ss_dssp EEEEEETTSCEEEEESSS--EEEEEE
T ss_pred CEEEeCCCCcEEEEEcCC--cEEEEE
Confidence 999999999999999765 445543
No 109
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=98.61 E-value=3.7e-07 Score=78.10 Aligned_cols=76 Identities=18% Similarity=0.349 Sum_probs=62.5
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
-++.+..+.+.||+...+|||+ ..+++||++|.+.+.+ ++ +. ..|.+||+
T Consensus 38 ~~~~~~~~~~~~g~~~~~H~H~-~~e~~~vl~G~~~~~~---~~------------------------~~--~~l~~Gd~ 87 (115)
T 1yhf_A 38 QDLGITVFSLDKGQEIGRHSSP-GDAMVTILSGLAEITI---DQ------------------------ET--YRVAEGQT 87 (115)
T ss_dssp TTEEEEEEEECTTCEEEEECCS-SEEEEEEEESEEEEEE---TT------------------------EE--EEEETTCE
T ss_pred CceEEEEEEECCCCccCCEECC-CcEEEEEEeCEEEEEE---CC------------------------EE--EEECCCCE
Confidence 3578899999999999999995 6899999999999875 21 12 57999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
++||+|.+|.+.|.+ ++.++++.+.+
T Consensus 88 ~~ip~~~~H~~~~~~--~~~~~~v~~~~ 113 (115)
T 1yhf_A 88 IVMPAGIPHALYAVE--AFQMLLVVVKP 113 (115)
T ss_dssp EEECTTSCEEEEESS--CEEEEEEEECS
T ss_pred EEECCCCCEEEEECC--CceEEEEEEcc
Confidence 999999999999986 46666655443
No 110
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=98.61 E-value=9.3e-08 Score=84.55 Aligned_cols=74 Identities=16% Similarity=0.112 Sum_probs=54.3
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeC
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIP 439 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVP 439 (539)
+..+.+.||+...+|||+...+++||++|++.+.+-.. -...|++||+++||
T Consensus 45 ~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~~----------------------------~~~~l~~Gd~~~ip 96 (134)
T 2o8q_A 45 VIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYEDI----------------------------GAVMLEAGGSAFQP 96 (134)
T ss_dssp EEEECC-----CCCEEECCSCEEEEEEESEEEEEETTT----------------------------EEEEEETTCEEECC
T ss_pred EEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEECCc----------------------------EEEEecCCCEEEEC
Confidence 44444558999999999778999999999999877331 12579999999999
Q ss_pred CCCeEEEEcCCCCcEEEEEEeec
Q 039441 440 PGHPIALVASPNEKLLTVGFSLN 462 (539)
Q Consensus 440 aG~~h~i~n~gne~l~~v~F~~n 462 (539)
+|.+|.+.|.++ .+.++++...
T Consensus 97 ~g~~H~~~~~~~-~~~~l~~~~p 118 (134)
T 2o8q_A 97 PGVRHRELRHSD-DLEVLEIVSP 118 (134)
T ss_dssp TTCCEEEEEECT-TCEEEEEESS
T ss_pred CCCcEEeEeCCC-CeEEEEEECC
Confidence 999999999766 4677765544
No 111
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.60 E-value=1.8e-07 Score=78.97 Aligned_cols=75 Identities=16% Similarity=0.314 Sum_probs=59.0
Q ss_pred eeeEEEeeeCCCeeecccccCC-CcE-EEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEE
Q 039441 200 NYRLAILEANPSTLVVPHHSDA-ETI-LVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKL 277 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA-~~~-~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l 277 (539)
.+.+.++++.|++...+|+|+. .++ +||++|++.+.+ +....+.|.+||+++||+|++|++.|.++ ..++.+
T Consensus 32 ~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~---~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~---~~~l~~ 105 (110)
T 2q30_A 32 NFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVG---DGDAVIPAPRGAVLVAPISTPHGVRAVTD---MKVLVT 105 (110)
T ss_dssp SCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEEC---GGGCEEEECTTEEEEEETTSCEEEEESSS---EEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEe---CCCEEEEECCCCEEEeCCCCcEEEEEcCC---cEEEEE
Confidence 4556666779999888898875 687 899999998875 21357899999999999999999999874 445555
Q ss_pred ecc
Q 039441 278 LQP 280 (539)
Q Consensus 278 ~d~ 280 (539)
+.|
T Consensus 106 ~~p 108 (110)
T 2q30_A 106 IAP 108 (110)
T ss_dssp EES
T ss_pred ECC
Confidence 543
No 112
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.59 E-value=1.5e-06 Score=87.32 Aligned_cols=203 Identities=13% Similarity=0.152 Sum_probs=117.0
Q ss_pred ecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCCCCcee----
Q 039441 214 VVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPGQFRV---- 289 (539)
Q Consensus 214 ~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg~f~~---- 289 (539)
..=||-+.++|+|+++|..+|-+++.|......|++||++.+|+|++|.=+-..+ . +++++.+.-.+|..+-
T Consensus 44 ~d~H~~~~dE~FyqlkG~m~l~~~d~g~~~~V~i~eGemfllP~gv~HsP~r~~e---t-~gLviE~~R~~~~~D~l~wy 119 (286)
T 2qnk_A 44 KDYHIEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVPHSPQRFAN---T-VGLVVERRRLETELDGLRYY 119 (286)
T ss_dssp CCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTEEEEECTTCCEEEEECTT---C-EEEEEEECCCTTCCEEEEEE
T ss_pred ccCcCCCCCeEEEEEeCeEEEEEEeCCceeeEEECCCeEEEeCCCCCcCCcccCC---e-EEEEEeecCCCCCccceEEE
Confidence 4446788999999999999999999877788999999999999999999998653 2 3344544443343321
Q ss_pred ccccCccEEEcC------hhhh-------------hhcCcccccc---CC---CCCCCCcceecC----CCCCcccCCCc
Q 039441 290 QQRQQGTIKRAS------QEQL-------------KALSHHASSR---RR---HGRGSTAPFNLL----SRKPIYNNNFG 340 (539)
Q Consensus 290 ~~q~~G~Ivrv~------~eql-------------~~l~~~~~~~---~~---~~~~~~~~fnl~----~~~p~~sn~~G 340 (539)
-.+-..++..+. ..|| +-=.|...+- ++ .......||+|. ...+.+.+ .|
T Consensus 120 c~~c~~~~~e~~f~~~dl~~ql~~~~~~f~~~~~~rtc~p~~~~~~~~~p~~~~~~~~~~pf~Lk~Wl~~h~~ei~s-~~ 198 (286)
T 2qnk_A 120 VGDTMDVLFEKWFYCKDLGTQLAPIIQEFFSSEQYRTGKPIPDQLLKEPPFPLSTRSIMEPMSLDAWLDSHHRELQA-GT 198 (286)
T ss_dssp STTSSSEEEEEEECCSSHHHHHHHHHHHHHTSHHHHHSCCCGGGSCSSCSSCCCCCCCCCCEEHHHHHHHTHHHHHT-TC
T ss_pred cCCCCCEEEEEEEEEechHHhhHHHHHHHhcCcccccCCCChhhcccCCCCCCccccccCCcCHHHHHHhhhHHHhc-CC
Confidence 111111221110 0111 1111111000 11 112344567763 23333322 11
Q ss_pred eEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhh
Q 039441 341 RFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESS 420 (539)
Q Consensus 341 ~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~ 420 (539)
.+ .+...+ .....+-+.+|.-...- .....|+++++|+..|+|-.
T Consensus 199 ~~-sLFg~~--------~eteV~l~G~Ges~~~~--~~~d~wiWqLEGss~Vt~~~------------------------ 243 (286)
T 2qnk_A 199 PL-SLFGDT--------YETQVIAYGQGSSEGLR--QNVDVWLWQLEGSSVVTMGG------------------------ 243 (286)
T ss_dssp CE-ESSCTT--------SSEEEEEECSEEEEECC--CSSCEEEEEEESCEEEEETT------------------------
T ss_pred cc-ccccCC--------CceEEEEEcCCcccccc--CcCcEEEEEEcCceEEEECC------------------------
Confidence 21 111111 11122225566443332 34589999999999765532
Q ss_pred cceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 421 RELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 421 ~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
.++.|++||.+.||++..|.+....+ ..+|.+..++
T Consensus 244 -----q~~~L~~~DsLLIpa~~~y~~~r~~g--sv~L~I~~~p 279 (286)
T 2qnk_A 244 -----RRLSLAPDDSLLVLAGTSYAWERTQG--SVALSVTQDP 279 (286)
T ss_dssp -----EEEEECTTEEEEECTTCCEEEEECTT--CEEEEEEECG
T ss_pred -----eEEeccCCCEEEecCCCeEEEEecCC--eEEEEEEECc
Confidence 23679999999999999999998644 5555544444
No 113
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.58 E-value=5.6e-07 Score=88.18 Aligned_cols=163 Identities=15% Similarity=0.134 Sum_probs=110.8
Q ss_pred eeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEecc
Q 039441 201 YRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQP 280 (539)
Q Consensus 201 ~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~ 280 (539)
....++++.|++.+-+|.|...+.+||++|.-. +. ...+.+||.+++|+|+.|.....+ . +.++..+
T Consensus 43 ~~~~lvr~~pG~~~p~H~H~g~Ee~~VL~G~f~----d~----~~~~~~Gd~~~~P~g~~H~p~a~~--g-c~~~vk~-- 109 (223)
T 3o14_A 43 RATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ----DE----HGDYPAGTYVRNPPTTSHVPGSAE--G-CTIFVKL-- 109 (223)
T ss_dssp EEEEEEEECTTEECCCEECTTCEEEEEEEEEEE----ET----TEEEETTEEEEECTTCEECCEESS--C-EEEEEEE--
T ss_pred cEEEEEEECCCCCcccccCCCCEEEEEEEeEEE----EC----CeEECCCeEEEeCCCCccccEeCC--C-CEEEEEe--
Confidence 456788999999999999999999999999954 22 458999999999999999888732 2 4333322
Q ss_pred CCCCCCceeccccCccEEEcChhhhhhcCccccccCCCCCCCCcceecCCCCCccc-CCCce-EEEeCCcccccccccce
Q 039441 281 VNTPGQFRVQQRQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPFNLLSRKPIYN-NNFGR-FFEATPKDYQQLQEIDA 358 (539)
Q Consensus 281 ~n~pg~f~~~~q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fnl~~~~p~~s-n~~G~-i~~~~~~~fP~L~~l~i 358 (539)
++|..+..+ .+ .. +...... ...|. +..+... ..-
T Consensus 110 ----~~~~~~d~~--~v-~~-----------------------------~~~~W~~~~~~Gv~~~~L~~~-------~~E 146 (223)
T 3o14_A 110 ----WQFDPADRT--QF-SK-----------------------------NMEAELGAPVEGISTSLLHED-------ERE 146 (223)
T ss_dssp ----SCSCTTCCB--CE-EE-----------------------------ETTTTCCCCBTTEEEEEEEEC-------SSC
T ss_pred ----cCCCCCccc--cc-cc-----------------------------chhcccccCCCCeEEEEEecC-------CCc
Confidence 222221111 01 00 0000000 01333 3333322 236
Q ss_pred eEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe
Q 039441 359 GVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII 438 (539)
Q Consensus 359 sva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV 438 (539)
.++++.+.||+.+.+|.| ...|| ||++|... ..+ ..+.+|+-+..
T Consensus 147 ~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d~~-----------------------------~~~~~GsWlR~ 191 (223)
T 3o14_A 147 TVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----VND-----------------------------EVLGRNAWLRL 191 (223)
T ss_dssp EEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----ETT-----------------------------EEECTTEEEEE
T ss_pred EEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----ECC-----------------------------ceECCCeEEEe
Confidence 778899999999999999 88997 99999963 221 35899999999
Q ss_pred CCCCeEEEEcCCCCcEE
Q 039441 439 PPGHPIALVASPNEKLL 455 (539)
Q Consensus 439 PaG~~h~i~n~gne~l~ 455 (539)
|.|..|...++ .++..
T Consensus 192 P~gs~h~~~ag-~~g~~ 207 (223)
T 3o14_A 192 PEGEALSATAG-ARGAK 207 (223)
T ss_dssp CTTCCEEEEEE-EEEEE
T ss_pred CCCCccCcEEC-CCCeE
Confidence 99999999884 34444
No 114
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=98.57 E-value=3.1e-07 Score=81.16 Aligned_cols=73 Identities=18% Similarity=0.293 Sum_probs=59.5
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
..+++.++.+.||+-. |||....+++||++|++.+++ ++ +. ..|++||+
T Consensus 38 ~~~~~~~~~~~pG~~~--~~H~~~~E~~~Vl~G~~~~~~---~g------------------------~~--~~l~~GD~ 86 (119)
T 3lwc_A 38 GPITIGYGRYAPGQSL--TETMAVDDVMIVLEGRLSVST---DG------------------------ET--VTAGPGEI 86 (119)
T ss_dssp CCCEEEEEEECTTCEE--EEECSSEEEEEEEEEEEEEEE---TT------------------------EE--EEECTTCE
T ss_pred CCEEEEEEEECCCCCc--CccCCCCEEEEEEeCEEEEEE---CC------------------------EE--EEECCCCE
Confidence 3589999999999854 677789999999999999988 23 22 57999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEe
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~ 460 (539)
++||+|.+|.+.|.+ +...+|.+.
T Consensus 87 v~ip~g~~H~~~~~~-~~~~~l~v~ 110 (119)
T 3lwc_A 87 VYMPKGETVTIRSHE-EGALTAYVT 110 (119)
T ss_dssp EEECTTCEEEEEEEE-EEEEEEEEE
T ss_pred EEECCCCEEEEEcCC-CCeEEEEEE
Confidence 999999999998874 556665443
No 115
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.57 E-value=2.9e-07 Score=86.52 Aligned_cols=79 Identities=13% Similarity=0.091 Sum_probs=64.2
Q ss_pred cccceeEEEEEEcCCceec--ceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeC
Q 039441 354 QEIDAGVTYVEINQGGMMV--PHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLS 431 (539)
Q Consensus 354 ~~l~isva~v~L~pGgm~~--PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~ 431 (539)
....+.+..+++.||+... +||| ...+++||++|++.+.+ ++ +. ..|+
T Consensus 100 ~~~~~~~~~~~~~pg~~~~~~~H~h-~~~E~~~Vl~G~~~~~~---~~------------------------~~--~~l~ 149 (192)
T 1y9q_A 100 ADTGLEIFEITLLDHHQQMSSPHAL-GVIEYIHVLEGIMKVFF---DE------------------------QW--HELQ 149 (192)
T ss_dssp TTTTEEEEEEEECTTCEEEECCCST-TCEEEEEEEESCEEEEE---TT------------------------EE--EEEC
T ss_pred CCCcEEEEEEEECCCCCccCCCCCC-CCEEEEEEEEeEEEEEE---CC------------------------EE--EEeC
Confidence 3456889999999999987 4554 56899999999999876 22 12 5799
Q ss_pred CCcEEEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 432 PGVVFIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 432 ~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
+||+++||+|.+|.+.|.+++++ ++.+...+
T Consensus 150 ~GD~i~i~~~~~H~~~n~~~~~~-~l~v~~~~ 180 (192)
T 1y9q_A 150 QGEHIRFFSDQPHGYAAVTEKAV-FQNIVAYP 180 (192)
T ss_dssp TTCEEEEECSSSEEEEESSSCEE-EEEEEECC
T ss_pred CCCEEEEcCCCCeEeECCCCCcE-EEEEEecC
Confidence 99999999999999999988888 77765443
No 116
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=98.56 E-value=2.4e-07 Score=79.60 Aligned_cols=72 Identities=18% Similarity=0.354 Sum_probs=59.6
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
++.+.++.+.|+.-..+|+++..+++||++|++.+.+ ...++.|++||+++||+|++|++.|.+ +++++.+.
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~~~e~~~vl~G~~~~~i----~~~~~~l~~Gd~i~i~~~~~H~~~~~~---~~~~~~i~ 108 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYFGDTLYLILQGEAVITF----DDQKIDLVPEDVLMVPAHKIHAIAGKG---RFKMLQIT 108 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCSSCEEEEEEEEEEEEEE----TTEEEEECTTCEEEECTTCCBEEEEEE---EEEEEEEE
T ss_pred CceEEEEEECCCCccccEECCCCeEEEEEeCEEEEEE----CCEEEEecCCCEEEECCCCcEEEEeCC---CcEEEEEE
Confidence 3557777789998888899999999999999999877 235899999999999999999999974 45544443
No 117
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.56 E-value=1.9e-07 Score=91.76 Aligned_cols=77 Identities=12% Similarity=0.066 Sum_probs=66.4
Q ss_pred eeeEEEeeeCC-CeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 200 NYRLAILEANP-STLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 200 ~~Rl~il~l~P-~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
.+.+.++++.| ++...+|++...+++||++|++.+.+ . ...+.|++||+++||+|++|++.|.+ +++++++.++
T Consensus 144 ~~~~~~~~~~p~g~~~~~H~H~~~e~~~Vl~G~~~~~i--~--~~~~~l~~Gd~i~ip~~~~H~~~n~~-~~~~~~l~v~ 218 (243)
T 3h7j_A 144 WVEIMLAKIPGNGGEMPFHKHRNEQIGICIGGGYDMTV--E--GCTVEMKFGTAYFCEPREDHGAINRS-EKESKSINIF 218 (243)
T ss_dssp TEEEEEEEECTTTEEEEEECCSSEEEEEECSSCEEEEE--T--TEEEEECTTCEEEECTTCCEEEEECS-SSCEEEEEEE
T ss_pred eeEEEEEEECCCCCcCCCEeCCCcEEEEEEECEEEEEE--C--CEEEEECCCCEEEECCCCcEEeEeCC-CCCEEEEEEE
Confidence 35677888999 88888898999999999999999876 2 25788999999999999999999998 5788888888
Q ss_pred ccC
Q 039441 279 QPV 281 (539)
Q Consensus 279 d~~ 281 (539)
.|.
T Consensus 219 ~p~ 221 (243)
T 3h7j_A 219 FPP 221 (243)
T ss_dssp ESC
T ss_pred cCC
Confidence 753
No 118
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.56 E-value=1.6e-07 Score=92.98 Aligned_cols=78 Identities=14% Similarity=0.105 Sum_probs=61.0
Q ss_pred eeeEEEeeeCCCeeecccccC-CCcEEEEEeceEEEEEEe---C--CCc-----------eeeecCCCcEEEeCCCCeEE
Q 039441 200 NYRLAILEANPSTLVVPHHSD-AETILVLLKGKGVITLVS---H--ERR-----------ESFNMEHGDVISVPAGTTYY 262 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~d-A~~~~yV~~G~g~i~~v~---p--g~~-----------~~~~v~~GDV~~iPaG~~h~ 262 (539)
.+.+..+++.|++...||||. +++|+||++|++.+.+-. + +.. .++.+++||+++||+|++|+
T Consensus 42 ~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~ 121 (239)
T 2xlg_A 42 GFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHG 121 (239)
T ss_dssp EEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEE
T ss_pred CEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEE
Confidence 344555566999998999766 899999999999996611 0 111 28899999999999999999
Q ss_pred EEecCCCceEEE-EEEe
Q 039441 263 LSNQDNVDRLHV-AKLL 278 (539)
Q Consensus 263 i~N~g~~e~L~i-v~l~ 278 (539)
+.|.++ +++++ +.++
T Consensus 122 ~~N~~~-~~~~~~l~~~ 137 (239)
T 2xlg_A 122 FVNPTD-KTLPIVFVWM 137 (239)
T ss_dssp EECCSS-SCEEEEEEEE
T ss_pred EEeCCC-CCEEEEEEEE
Confidence 999984 66777 5555
No 119
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.55 E-value=2.5e-07 Score=80.50 Aligned_cols=61 Identities=16% Similarity=0.127 Sum_probs=49.7
Q ss_pred cccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEec
Q 039441 217 HHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQ 279 (539)
Q Consensus 217 h~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d 279 (539)
+|++.++++||++|++.+.+ .+....+.|++||.++||||++|.+.|.+++..+++++++-
T Consensus 49 ~~~~~~E~~~Vl~G~~~l~~--~~~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~~ 109 (112)
T 2opk_A 49 YDSPQDEWVMVVSGSAGIEC--EGDTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVHC 109 (112)
T ss_dssp BCCSSEEEEEEEESCEEEEE--TTCSSCEEECTTEEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred ccCCccEEEEEEeCeEEEEE--CCEEEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEE
Confidence 67889999999999999987 22222389999999999999999999998654666666654
No 120
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.54 E-value=2.8e-07 Score=92.21 Aligned_cols=76 Identities=20% Similarity=0.190 Sum_probs=64.9
Q ss_pred eeeEEEeeeCCCeeecc-cccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 200 NYRLAILEANPSTLVVP-HHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lP-h~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
.+.+.++++.|++..-+ |++...+++||++|++.+.+ +.+.+.|++||+++||+|++|++.|.++.++++++++.
T Consensus 181 ~~~~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i----~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~~ 256 (274)
T 1sef_A 181 DMNMHILSFEPGASHAYIETHVQEHGAYLISGQGMYNL----DNEWYPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYSK 256 (274)
T ss_dssp SEEEEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEE----TTEEEEEETTCEEEECTTCCEEEEEECSSSCEEEEEEE
T ss_pred CEEEEEEEECCCCccCcceeccCeEEEEEEeCEEEEEE----CCEEEEECCCCEEEECCCCCEEEEeCCCCCCEEEEEEE
Confidence 55677778899998876 88899999999999999987 23689999999999999999999999843778877765
Q ss_pred c
Q 039441 279 Q 279 (539)
Q Consensus 279 d 279 (539)
+
T Consensus 257 ~ 257 (274)
T 1sef_A 257 D 257 (274)
T ss_dssp E
T ss_pred c
Confidence 5
No 121
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.53 E-value=2.3e-07 Score=91.95 Aligned_cols=77 Identities=17% Similarity=0.090 Sum_probs=61.7
Q ss_pred eeeEEEeeeCCCeeeccccc-CCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 200 NYRLAILEANPSTLVVPHHS-DAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~-dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
.+.+.++++.|++-.-+||+ ...+++||++|++.+.+ ..+.+.|++||+++||+|++|++.|.++.++++++.+.
T Consensus 178 ~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i----~~~~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~~~ 253 (261)
T 1rc6_A 178 DMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNL----DNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSK 253 (261)
T ss_dssp SEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEES----SSCEEEEETTCEEEECSSEEEEEEEC----CEEEEEEE
T ss_pred ceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEE----CCEEEEeCCCCEEEECCCCcEEeEeCCCCcCEEEEEEe
Confidence 34567777899998777865 67899999999999876 23689999999999999999999999843789888877
Q ss_pred cc
Q 039441 279 QP 280 (539)
Q Consensus 279 d~ 280 (539)
|.
T Consensus 254 d~ 255 (261)
T 1rc6_A 254 DC 255 (261)
T ss_dssp EC
T ss_pred cC
Confidence 64
No 122
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.51 E-value=6e-07 Score=90.99 Aligned_cols=78 Identities=15% Similarity=0.234 Sum_probs=66.4
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
..+.+..+.+.||+...+|||+++.+++||++|++.+.+ ++ +. ..|++||+
T Consensus 44 ~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~---~~------------------------~~--~~l~~Gd~ 94 (337)
T 1y3t_A 44 DLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL---DG------------------------ER--YLLISGDY 94 (337)
T ss_dssp SSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE---TT------------------------EE--EEECTTCE
T ss_pred CeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE---CC------------------------EE--EEECCCCE
Confidence 368899999999999999999779999999999999986 22 22 57999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
++||+|.+|.+.|.++ ++.++.+.+.+
T Consensus 95 ~~~p~~~~H~~~n~~~-~~~~~~~~~p~ 121 (337)
T 1y3t_A 95 ANIPAGTPHSYRMQSH-RTRLVSYTMKG 121 (337)
T ss_dssp EEECTTCCEEEEECST-TEEEEEEEETT
T ss_pred EEECCCCcEEEEECCC-CeEEEEEECCC
Confidence 9999999999999876 58787765544
No 123
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.51 E-value=2.5e-07 Score=86.95 Aligned_cols=105 Identities=14% Similarity=0.173 Sum_probs=66.7
Q ss_pred CCceeecCc--cceeEecCCceEEEeeccCcccccccCcceeeEEEeeeCC-Ceeeccc-ccCCCcEEEEEeceEEEEEE
Q 039441 162 NPYYFHSQR--FRYRVRSDSGHMRVLQRFSQKSHLLRGIDNYRLAILEANP-STLVVPH-HSDAETILVLLKGKGVITLV 237 (539)
Q Consensus 162 ~py~f~~~~--f~~~v~se~G~i~vl~~f~~~s~~l~gv~~~Rl~il~l~P-~~l~lPh-~~dA~~~~yV~~G~g~i~~v 237 (539)
.+++|.... ......++.+.+++...|++.. ..+-..+|+|.| ++-.-|+ ++++.+++||++|+..|++
T Consensus 53 ~~ia~~~~~~~t~~v~~~~~~~~~fa~~fs~~~------~~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl- 125 (166)
T 2vpv_A 53 EIIAFAPNLSQTEQVKDTKDENFALEIMFDKHK------EYFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTV- 125 (166)
T ss_dssp --------------------CBCCCCEECCTTT------CSCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEE-
T ss_pred eeEEECCCCCceEecCCCCCCCEEEEEeecCCc------ccceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEE-
Confidence 456665432 2333334446665555555432 133455677899 7655554 6889999999999999998
Q ss_pred eCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEE
Q 039441 238 SHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKL 277 (539)
Q Consensus 238 ~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l 277 (539)
...++.|.+||.++||+|.+|.|.|.++ ..++++.+
T Consensus 126 ---~g~~~~L~~Gds~~iP~g~~H~~~N~~d-~~Arll~V 161 (166)
T 2vpv_A 126 ---CKNKFLSVKGSTFQIPAFNEYAIANRGN-DEAKMFFV 161 (166)
T ss_dssp ---TTEEEEEETTCEEEECTTCEEEEEECSS-SCEEEEEE
T ss_pred ---CCEEEEEcCCCEEEECCCCCEEEEECCC-CCEEEEEE
Confidence 3478999999999999999999999984 66666654
No 124
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.49 E-value=4.6e-07 Score=83.89 Aligned_cols=76 Identities=14% Similarity=0.221 Sum_probs=61.2
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEec
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQ 279 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d 279 (539)
.+...+++++ +-..|+|++.++++||++|++.|++ .| +++.|++||+|+||+|+.|.+.|. +.++++++..
T Consensus 65 ~~s~g~~~~e--~~~~~~~~~~eE~~yVLeG~~~l~i--~g--~~~~l~~GD~i~iP~G~~h~~~n~---~~a~~l~V~~ 135 (151)
T 4axo_A 65 RLGCGMMEMK--ETTFDWTLNYDEIDYVIDGTLDIII--DG--RKVSASSGELIFIPKGSKIQFSVP---DYARFIYVTY 135 (151)
T ss_dssp SCEEEEEEEE--EEEEEEECSSEEEEEEEEEEEEEEE--TT--EEEEEETTCEEEECTTCEEEEEEE---EEEEEEEEEE
T ss_pred cEEEEEEEEc--CccccEeCCCcEEEEEEEeEEEEEE--CC--EEEEEcCCCEEEECCCCEEEEEeC---CCEEEEEEEC
Confidence 4556666666 3345677899999999999999996 22 689999999999999999999997 4688888888
Q ss_pred cCCCC
Q 039441 280 PVNTP 284 (539)
Q Consensus 280 ~~n~p 284 (539)
|.+.+
T Consensus 136 P~~~~ 140 (151)
T 4axo_A 136 PADWA 140 (151)
T ss_dssp CSCC-
T ss_pred CCCcc
Confidence 76654
No 125
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.48 E-value=2.4e-07 Score=87.48 Aligned_cols=79 Identities=16% Similarity=0.210 Sum_probs=66.2
Q ss_pred ceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 199 DNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
....+.++++.|++-..+|++...+++||++|+..+.+= ..+++.|++||++ ||+|++|++.|.+ +++++++.++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~ld---~ge~~~L~~GDsi-~~~g~~H~~~N~g-~~~ar~l~V~ 151 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTNSIDYGIVLEGEIELELD---DGAKRTVRQGGII-VQRGTNHLWRNTT-DKPCRIAFIL 151 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCSEEEEEEEEESCEEEECG---GGCEEEECTTCEE-EECSCCBEEECCS-SSCEEEEEEE
T ss_pred CCeEEEEEEECCCCCCCCeecCceEEEEEEeCEEEEEEC---CCeEEEECCCCEE-EeCCCcEEEEeCC-CCCEEEEEEE
Confidence 345566677799999999988989999999999998752 1357899999999 9999999999998 5789998888
Q ss_pred ccCC
Q 039441 279 QPVN 282 (539)
Q Consensus 279 d~~n 282 (539)
.+..
T Consensus 152 ~P~~ 155 (172)
T 3es1_A 152 IEAP 155 (172)
T ss_dssp EECC
T ss_pred cCCC
Confidence 7543
No 126
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.48 E-value=5.7e-07 Score=95.04 Aligned_cols=78 Identities=12% Similarity=0.051 Sum_probs=68.0
Q ss_pred ccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCc
Q 039441 355 EIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGV 434 (539)
Q Consensus 355 ~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GD 434 (539)
.-.|.+..+.|.||....+|.|.. .++.||++|+|.++.++. ++ ..+++||
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~-~ev~~IleG~G~~t~v~G--------------------------~~--~~~~~GD 170 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAA-SALRFIMEGSGAYTIVDG--------------------------HK--VELGAND 170 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESS-CEEEEEEECSCEEEEETT--------------------------EE--EEECTTC
T ss_pred CCeeEEEEEEECCCCCcCCccCCc-ceEEEEEEeeEEEEEECC--------------------------EE--EEEcCCC
Confidence 346889999999999999999955 599999999998877754 23 4799999
Q ss_pred EEEeCCCCeEEEEc-CCCCcEEEEEEee
Q 039441 435 VFIIPPGHPIALVA-SPNEKLLTVGFSL 461 (539)
Q Consensus 435 V~vVPaG~~h~i~n-~gne~l~~v~F~~ 461 (539)
+|++|.|..|.+.| .++++|.||++.+
T Consensus 171 ~i~~P~g~~H~~~N~~gde~l~~l~v~d 198 (394)
T 3bu7_A 171 FVLTPNGTWHEHGILESGTECIWQDGLD 198 (394)
T ss_dssp EEEECTTCCEEEEECTTCCCEEEEEEEC
T ss_pred EEEECcCCCEEEEcCCCCCCEEEEEccc
Confidence 99999999999999 9999999998553
No 127
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.45 E-value=1.6e-06 Score=80.78 Aligned_cols=99 Identities=18% Similarity=0.196 Sum_probs=69.9
Q ss_pred ceecCCCCCcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEe--ceEEEEEecCCCCcc
Q 039441 325 PFNLLSRKPIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVE--GRGRFEMGGPLSSRW 402 (539)
Q Consensus 325 ~fnl~~~~p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~--G~g~v~vV~p~gs~~ 402 (539)
..+|.+- |.....+|....+-... ..+.+++..+.+ ++-..+|||+...|+.||++ |+|.+.+ ++
T Consensus 19 iv~~~ei-~~~~~~~G~srR~l~~~----~~fp~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~i---dg--- 85 (157)
T 4h7l_A 19 MISLSEI-EAVACPCGWAQRAFGHD----AGTSVSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIEL---NG--- 85 (157)
T ss_dssp EEETTTS-CCEEETTEEEEEESCGG----GCCSCEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEE---TT---
T ss_pred EEEhhhC-CCccCCCCeeeEEeEcC----CCCcEEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEE---CC---
Confidence 3444433 33455688865544321 122345555555 45568999988999999999 9999987 22
Q ss_pred chhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 403 SQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 403 s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
+. ..|++||+++||+|..|.+.+ ++.+|++.+-+
T Consensus 86 ---------------------e~--~~l~~GD~v~IPpg~~H~i~g----~l~~L~I~~Pp 119 (157)
T 4h7l_A 86 ---------------------QS--YPLTKLLAISIPPLVRHRIVG----EATIINIVSPP 119 (157)
T ss_dssp ---------------------EE--EECCTTEEEEECTTCCEEEES----CEEEEEEEESS
T ss_pred ---------------------EE--EEeCCCCEEEECCCCeEeeEC----CEEEEEEECCC
Confidence 22 579999999999999999973 59999987665
No 128
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.45 E-value=4.4e-07 Score=81.81 Aligned_cols=73 Identities=16% Similarity=0.294 Sum_probs=59.3
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEec
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQ 279 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d 279 (539)
.+...++++.|+. .++|++.++++||++|++.|++ + -+++.|++||+++||+|++|.+.|. ++++++.++.
T Consensus 56 ~~~~~~~~~~pG~--~~~h~~~~E~~~VLeG~~~l~~---~-g~~~~l~~GD~i~~p~g~~h~~~~~---~~~~~l~v~~ 126 (133)
T 2pyt_A 56 SMAAGFMQWDNAF--FPWTLNYDEIDMVLEGELHVRH---E-GETMIAKAGDVMFIPKGSSIEFGTP---TSVRFLYVAW 126 (133)
T ss_dssp SSEEEEEEEEEEE--EEEECSSEEEEEEEEEEEEEEE---T-TEEEEEETTCEEEECTTCEEEEEEE---EEEEEEEEEE
T ss_pred cEEEEEEEECCCC--ccccCCCCEEEEEEECEEEEEE---C-CEEEEECCCcEEEECCCCEEEEEeC---CCEEEEEEEc
Confidence 4567777889993 4556689999999999999987 2 4678999999999999999999985 4677777775
Q ss_pred cC
Q 039441 280 PV 281 (539)
Q Consensus 280 ~~ 281 (539)
+.
T Consensus 127 p~ 128 (133)
T 2pyt_A 127 PA 128 (133)
T ss_dssp ST
T ss_pred CC
Confidence 43
No 129
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.44 E-value=6.4e-07 Score=93.86 Aligned_cols=77 Identities=13% Similarity=0.094 Sum_probs=66.8
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
-.|.+.+..|.||+...+|-|. ..+|.||++|+|...+|+. ++ ..+++||+
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~-~~ev~~VleG~G~~~~vdG--------------------------~~--~~~~~GD~ 151 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHS-QNAFRFVVEGEGVWTVVNG--------------------------DP--VRMSRGDL 151 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEECSSCEEEEEEETT--------------------------EE--EEEETTCE
T ss_pred CceEEEEEEECCCCccCceecc-cceEEEEEecceEEEEECC--------------------------EE--EEEeCCCE
Confidence 4689999999999999999995 5699999999996455543 23 57999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEee
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSL 461 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~ 461 (539)
|+||+|..|.+.|++++++.|+++.+
T Consensus 152 v~iP~g~~H~~~N~gde~l~~l~v~D 177 (368)
T 3nw4_A 152 LLTPGWCFHGHMNDTDQPMAWIDGLD 177 (368)
T ss_dssp EEECTTCCEEEEECSSSCEEEEEEEC
T ss_pred EEECCCCcEEeEeCCCCCeEEEEecc
Confidence 99999999999999999999998654
No 130
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.41 E-value=1.8e-06 Score=82.74 Aligned_cols=81 Identities=14% Similarity=0.253 Sum_probs=65.2
Q ss_pred eeEEEEEEcCCc----------eecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEE
Q 039441 358 AGVTYVEINQGG----------MMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKIS 427 (539)
Q Consensus 358 isva~v~L~pGg----------m~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~ 427 (539)
.++..+.+.|+. .+.+|+|+. .+|.||++|+|.+.|-..++ +.++
T Consensus 74 ~~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~-~Ei~yVleG~G~f~i~d~~d------------------------~~~~ 128 (191)
T 1vr3_A 74 SWMDIITICKDTLPNYEEKIKMFFEEHLHLD-EEIRYILEGSGYFDVRDKED------------------------KWIR 128 (191)
T ss_dssp CEEEEEEESTTTSTTHHHHHHHHHSCEECSS-CEEEEEEEEEEEEEEECTTS------------------------CEEE
T ss_pred CceeEEEECCCcCcchhhhhccCCcceECCc-ceEEEEEeceEEEEECCCCC------------------------eEEE
Confidence 356777787776 347899976 89999999999999987533 2455
Q ss_pred eeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 428 ANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 428 ~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
..|++||+++||+|.+|+..++.+..+..|-|+...
T Consensus 129 i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~ 164 (191)
T 1vr3_A 129 ISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGE 164 (191)
T ss_dssp EEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSS
T ss_pred EEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCC
Confidence 689999999999999999999877678888777654
No 131
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.40 E-value=1.2e-06 Score=88.11 Aligned_cols=76 Identities=16% Similarity=0.259 Sum_probs=65.5
Q ss_pred ceeeEEEeeeCCCeeecc-cccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEE
Q 039441 199 DNYRLAILEANPSTLVVP-HHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKL 277 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lP-h~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l 277 (539)
.+|-+.+++++|++..-. |+|.....+||++|+|++.+ +...+.|++||++++|++.+||++|.| +++|++|+.
T Consensus 184 ~d~~~~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~l----~~~~~~V~~GD~i~~~~~~~h~~~n~G-~e~~~yl~y 258 (266)
T 4e2q_A 184 YDFNIHTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYRL----GDNWYPVQAGDVIWMAPFVPQWYAALG-KTRSRYLLY 258 (266)
T ss_dssp CSEEEEEEEECTTCBCSSCCCCSCCEEEEEEECEEEEEE----TTEEEEEETTCEEEECTTCCEEEEEES-SSCEEEEEE
T ss_pred cceEEEEEEECCCcCcCCceEcccceEEEEEeceEEEEE----CCEEEEecCCCEEEECCCCcEEEEeCC-CCCEEEEEE
Confidence 467778889999999864 67888899999999999986 336899999999999999999999999 589987765
Q ss_pred ec
Q 039441 278 LQ 279 (539)
Q Consensus 278 ~d 279 (539)
=|
T Consensus 259 kd 260 (266)
T 4e2q_A 259 KD 260 (266)
T ss_dssp EE
T ss_pred cc
Confidence 44
No 132
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.37 E-value=1.5e-06 Score=81.55 Aligned_cols=73 Identities=12% Similarity=0.070 Sum_probs=63.3
Q ss_pred eeEEEEEEcC-CceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 358 AGVTYVEINQ-GGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 358 isva~v~L~p-Ggm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
+.+..+.|.| |+...|+.+..+.+++||++|++.++|-. + ++.|.+||.+
T Consensus 88 ~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~g---------------------------~--~~~L~~Gds~ 138 (166)
T 2vpv_A 88 FASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCK---------------------------N--KFLSVKGSTF 138 (166)
T ss_dssp CEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETT---------------------------E--EEEEETTCEE
T ss_pred ceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEECC---------------------------E--EEEEcCCCEE
Confidence 6777899999 88889988889999999999999998822 1 2579999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEEE
Q 039441 437 IIPPGHPIALVASPNEKLLTVGF 459 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~F 459 (539)
+||+|.+|.+.|.++.++.++..
T Consensus 139 ~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 139 QIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp EECTTCEEEEEECSSSCEEEEEE
T ss_pred EECCCCCEEEEECCCCCEEEEEE
Confidence 99999999999999988777653
No 133
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.37 E-value=1.1e-06 Score=85.52 Aligned_cols=64 Identities=17% Similarity=0.366 Sum_probs=57.1
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEe-cC
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSN-QD 267 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N-~g 267 (539)
.+.+.++++.|++..-+|++..++++||++|++.+.+ +...+.|++||.++||+|++|++.| .+
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i----~g~~~~l~~Gd~i~ip~~~~H~~~~~~~ 216 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAPGDALVTVLDGEGKYYV----DGKPFIVKKGESAVLPANIPHAVEAETE 216 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCSSEEEEEEEEEEEEEEE----TTEEEEEETTEEEEECTTSCEEEECCSS
T ss_pred CeEEEEEEECCCCccCCEECCCcEEEEEEeEEEEEEE----CCEEEEECCCCEEEECCCCcEEEEeCCC
Confidence 4677888889999999999999999999999999986 2358999999999999999999999 64
No 134
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=98.36 E-value=1.5e-06 Score=74.47 Aligned_cols=72 Identities=14% Similarity=0.267 Sum_probs=58.7
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
++.+..+.+.||.-..+||| ...+++||++|++.+.+ ++ + ...|++||++
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h-~~~e~~~vl~G~~~~~i---~~------------------------~--~~~l~~Gd~i 86 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEY-FGDTLYLILQGEAVITF---DD------------------------Q--KIDLVPEDVL 86 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCC-SSCEEEEEEEEEEEEEE---TT------------------------E--EEEECTTCEE
T ss_pred CceEEEEEECCCCccccEEC-CCCeEEEEEeCEEEEEE---CC------------------------E--EEEecCCCEE
Confidence 46677888999999999999 57899999999999876 21 1 2579999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEEEe
Q 039441 437 IIPPGHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~F~ 460 (539)
+||+|.+|.+.|. +++.++.+.
T Consensus 87 ~i~~~~~H~~~~~--~~~~~~~i~ 108 (114)
T 2ozj_A 87 MVPAHKIHAIAGK--GRFKMLQIT 108 (114)
T ss_dssp EECTTCCBEEEEE--EEEEEEEEE
T ss_pred EECCCCcEEEEeC--CCcEEEEEE
Confidence 9999999999996 356666544
No 135
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.35 E-value=1.2e-06 Score=73.00 Aligned_cols=68 Identities=19% Similarity=0.330 Sum_probs=51.4
Q ss_pred eEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe
Q 039441 359 GVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII 438 (539)
Q Consensus 359 sva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV 438 (539)
.+....+. +...+|||+.+.+++||++|++.+.+-.. . ..|.+||+++|
T Consensus 32 ~~~~~~~~--~~~~~H~H~~~~e~~~v~~G~~~~~~~~~---------------------------~--~~l~~Gd~~~i 80 (102)
T 3d82_A 32 QFKLVKVE--GEFVWHEHADTDEVFIVMEGTLQIAFRDQ---------------------------N--ITLQAGEMYVI 80 (102)
T ss_dssp EEEEEEEE--EECCCBCCTTCCEEEEEEESEEEEECSSC---------------------------E--EEEETTEEEEE
T ss_pred EEEEEEEC--CCCCceeCCCCcEEEEEEeCEEEEEECCE---------------------------E--EEEcCCCEEEE
Confidence 33344443 45789999877999999999998865221 2 46999999999
Q ss_pred CCCCeEEEEcCCCCcEEEEEE
Q 039441 439 PPGHPIALVASPNEKLLTVGF 459 (539)
Q Consensus 439 PaG~~h~i~n~gne~l~~v~F 459 (539)
|+|.+|.+.|.+ +..++.+
T Consensus 81 p~~~~H~~~~~~--~~~~l~i 99 (102)
T 3d82_A 81 PKGVEHKPMAKE--ECKIMII 99 (102)
T ss_dssp CTTCCBEEEEEE--EEEEEEE
T ss_pred CCCCeEeeEcCC--CCEEEEE
Confidence 999999999973 4555554
No 136
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.34 E-value=8.3e-07 Score=75.45 Aligned_cols=70 Identities=11% Similarity=0.086 Sum_probs=53.2
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeC
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIP 439 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVP 439 (539)
...+.+.||.. .+|||+...++.||++|++.+.+-.. . . ..|++||+++||
T Consensus 30 ~~~~~~~~g~~-~~H~H~~~~E~~~Vl~G~~~~~~~~~-~-------------------------~--~~l~~Gd~~~ip 80 (107)
T 2i45_A 30 QFHLVKLLGDY-GWHTHGYSDKVLFAVEGDMAVDFADG-G-------------------------S--MTIREGEMAVVP 80 (107)
T ss_dssp EEEEEEEEEEC-CCBCC--CCEEEEESSSCEEEEETTS-C-------------------------E--EEECTTEEEEEC
T ss_pred EEEEEECCCCC-cceeCCCCCEEEEEEeCEEEEEECCC-c-------------------------E--EEECCCCEEEEC
Confidence 34466778874 59999777999999999999876431 1 2 579999999999
Q ss_pred CCCeEEEEcCCCCcEEEEEEe
Q 039441 440 PGHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 440 aG~~h~i~n~gne~l~~v~F~ 460 (539)
+|.+|.+.|. +++.++.|.
T Consensus 81 ~~~~H~~~~~--~~~~~l~i~ 99 (107)
T 2i45_A 81 KSVSHRPRSE--NGCSLVLIE 99 (107)
T ss_dssp TTCCEEEEEE--EEEEEEEEE
T ss_pred CCCcEeeEeC--CCeEEEEEE
Confidence 9999999995 356666654
No 137
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.32 E-value=2e-06 Score=89.24 Aligned_cols=81 Identities=11% Similarity=0.028 Sum_probs=63.2
Q ss_pred ceeEEEEEEcCCceec---ceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCC
Q 039441 357 DAGVTYVEINQGGMMV---PHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPG 433 (539)
Q Consensus 357 ~isva~v~L~pGgm~~---PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~G 433 (539)
.+.+. ..+.|++... ||||++..|++||++|++.+.+-..++. .....|++|
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~------------------------~~~~~L~~G 101 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNET------------------------QQTRVLSSG 101 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSC------------------------CEEEEEETT
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCc------------------------eEEEEECCC
Confidence 35666 5666766655 8999889999999999999988774431 234689999
Q ss_pred cEEEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 434 VVFIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 434 DV~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
|+++||+|.+|.+.|.+++. .+|.+.+.+
T Consensus 102 D~v~ip~g~~H~~~n~~~~~-~~l~v~~p~ 130 (350)
T 1juh_A 102 DYGSVPRNVTHTFQIQDPDT-EMTGVIVPG 130 (350)
T ss_dssp CEEEECTTEEEEEEECSTTE-EEEEEEESS
T ss_pred CEEEECCCCcEEEEeCCCCC-EEEEEEcCc
Confidence 99999999999999987765 776655444
No 138
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.32 E-value=1.5e-06 Score=87.49 Aligned_cols=78 Identities=18% Similarity=0.179 Sum_probs=67.7
Q ss_pred ceeeEEEeeeCCCeeecc-cccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEE
Q 039441 199 DNYRLAILEANPSTLVVP-HHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKL 277 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lP-h~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l 277 (539)
.++.+.+++++|++-.-. |++.-.+.+||++|+|++.+ +...+.|++||++++++|.+|+++|.| +++|++|++
T Consensus 189 ~~~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~----~~~~~~v~~GD~~~~~~~~~h~~~n~g-~~~~~yl~~ 263 (278)
T 1sq4_A 189 HDMHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRL----NQDWVEVEAGDFMWLRAFCPQACYSGG-PGRFRYLLY 263 (278)
T ss_dssp CSEEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEE----TTEEEEEETTCEEEEEESCCEEEECCS-SSCEEEEEE
T ss_pred CCeEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEE----CCEEEEeCCCCEEEECCCCCEEEEcCC-CCCEEEEEE
Confidence 478888999999997764 56777789999999999886 346899999999999999999999999 589999998
Q ss_pred eccC
Q 039441 278 LQPV 281 (539)
Q Consensus 278 ~d~~ 281 (539)
.|..
T Consensus 264 ~d~n 267 (278)
T 1sq4_A 264 KDVN 267 (278)
T ss_dssp EECS
T ss_pred EEcC
Confidence 8854
No 139
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.31 E-value=7.2e-06 Score=71.16 Aligned_cols=80 Identities=16% Similarity=0.230 Sum_probs=58.2
Q ss_pred cccceeEEEEEEcCCceecce--ecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeC
Q 039441 354 QEIDAGVTYVEINQGGMMVPH--YNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLS 431 (539)
Q Consensus 354 ~~l~isva~v~L~pGgm~~PH--whpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~ 431 (539)
.+-++.+.++. .+|....++ +|....++.||++|++.+.+=.. .....|+
T Consensus 27 ~~~~~~i~~i~-~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~~~~---------------------------~~~~~l~ 78 (112)
T 2opk_A 27 ERKGLKIERII-SNGQASPPGFWYDSPQDEWVMVVSGSAGIECEGD---------------------------TAPRVMR 78 (112)
T ss_dssp EETTEEEEEEE-ESSCCCCTTCCBCCSSEEEEEEEESCEEEEETTC---------------------------SSCEEEC
T ss_pred cCCCEEEEEEE-eCCccCCCCccccCCccEEEEEEeCeEEEEECCE---------------------------EEEEEEC
Confidence 34456666664 445555552 55578999999999999977332 1014699
Q ss_pred CCcEEEeCCCCeEEEEcCCCC-cEEEEEEee
Q 039441 432 PGVVFIIPPGHPIALVASPNE-KLLTVGFSL 461 (539)
Q Consensus 432 ~GDV~vVPaG~~h~i~n~gne-~l~~v~F~~ 461 (539)
+||.++||+|.+|.+.|.+++ ...||++..
T Consensus 79 ~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~~ 109 (112)
T 2opk_A 79 PGDWLHVPAHCRHRVAWTDGGEPTVWLAVHC 109 (112)
T ss_dssp TTEEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred CCCEEEECCCCcEEEEeCCCCCCEEEEEEEE
Confidence 999999999999999998765 577777653
No 140
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.31 E-value=1.3e-06 Score=82.53 Aligned_cols=77 Identities=14% Similarity=0.172 Sum_probs=65.7
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
++.+.+++|.||+-..+|.| ...+++||++|++.+.+-.. +. ..|++||++
T Consensus 78 G~~~~~v~l~PG~~~~~H~H-~~eE~~~VLeGel~l~ld~g--------------------------e~--~~L~~GDsi 128 (172)
T 3es1_A 78 GSVIRVVDMLPGKESPMHRT-NSIDYGIVLEGEIELELDDG--------------------------AK--RTVRQGGII 128 (172)
T ss_dssp SEEEEEEEECTTCBCCCBCC-SEEEEEEEEESCEEEECGGG--------------------------CE--EEECTTCEE
T ss_pred CeEEEEEEECCCCCCCCeec-CceEEEEEEeCEEEEEECCC--------------------------eE--EEECCCCEE
Confidence 67888999999999999998 56789999999999875321 12 469999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 437 IIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
||+|.+|.+.|.+++++.++++.+.+
T Consensus 129 -~~~g~~H~~~N~g~~~ar~l~V~~P~ 154 (172)
T 3es1_A 129 -VQRGTNHLWRNTTDKPCRIAFILIEA 154 (172)
T ss_dssp -EECSCCBEEECCSSSCEEEEEEEEEC
T ss_pred -EeCCCcEEEEeCCCCCEEEEEEEcCC
Confidence 99999999999999999999877665
No 141
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.31 E-value=1.3e-06 Score=81.31 Aligned_cols=67 Identities=18% Similarity=0.272 Sum_probs=54.9
Q ss_pred CCCeeecccccC-CCcEEEEEe--ceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCC
Q 039441 209 NPSTLVVPHHSD-AETILVLLK--GKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTP 284 (539)
Q Consensus 209 ~P~~l~lPh~~d-A~~~~yV~~--G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~p 284 (539)
.+++...+|||. ..+++||++ |+|.+.+ .-+.+.|++||+++||+|+.|++.+ +|+++.++.|...+
T Consensus 53 ~~g~~~~~H~H~~~~E~~yVLe~~G~g~v~i----dge~~~l~~GD~v~IPpg~~H~i~g-----~l~~L~I~~Pp~~~ 122 (157)
T 4h7l_A 53 QITKAARTHYHREHQEIYVVLDHAAHATIEL----NGQSYPLTKLLAISIPPLVRHRIVG-----EATIINIVSPPFDP 122 (157)
T ss_dssp EECSCCCCBBCSSCEEEEEEEEECTTCEEEE----TTEEEECCTTEEEEECTTCCEEEES-----CEEEEEEEESSCCT
T ss_pred eCCCCccceECCCCcEEEEEEecCcEEEEEE----CCEEEEeCCCCEEEECCCCeEeeEC-----CEEEEEEECCCCCC
Confidence 445556788774 679999999 9999987 2368999999999999999999984 48999988876543
No 142
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.29 E-value=1.1e-06 Score=74.78 Aligned_cols=64 Identities=13% Similarity=0.200 Sum_probs=49.4
Q ss_pred eeeCCCeeecccccCC-CcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEE
Q 039441 206 LEANPSTLVVPHHSDA-ETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAK 276 (539)
Q Consensus 206 l~l~P~~l~lPh~~dA-~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~ 276 (539)
+.+.|+.+. +|||+. .+++||++|++.+.+= + ..++.|++||+++||+|++|++.|.+ +++++.
T Consensus 33 ~~~~~g~~~-~H~H~~~~E~~~Vl~G~~~~~~~--~-~~~~~l~~Gd~~~ip~~~~H~~~~~~---~~~~l~ 97 (107)
T 2i45_A 33 LVKLLGDYG-WHTHGYSDKVLFAVEGDMAVDFA--D-GGSMTIREGEMAVVPKSVSHRPRSEN---GCSLVL 97 (107)
T ss_dssp EEEEEEECC-CBCC--CCEEEEESSSCEEEEET--T-SCEEEECTTEEEEECTTCCEEEEEEE---EEEEEE
T ss_pred EEECCCCCc-ceeCCCCCEEEEEEeCEEEEEEC--C-CcEEEECCCCEEEECCCCcEeeEeCC---CeEEEE
Confidence 344787754 888876 9999999999998762 2 25799999999999999999999953 455443
No 143
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.28 E-value=1.3e-06 Score=75.26 Aligned_cols=59 Identities=24% Similarity=0.341 Sum_probs=49.3
Q ss_pred EeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCC
Q 039441 205 ILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDN 268 (539)
Q Consensus 205 il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~ 268 (539)
+.++.|+.+. .+++..+++||++|++.+.+ +...++.|++||+++||+|++|.+.|.++
T Consensus 35 ~~~~~pg~~~--~hH~~~E~~~Vl~G~~~~~i---~~g~~~~l~~GD~i~ip~g~~H~~~n~~~ 93 (101)
T 1o5u_A 35 IWEKEVSEFD--WYYDTNETCYILEGKVEVTT---EDGKKYVIEKGDLVTFPKGLRCRWKVLEP 93 (101)
T ss_dssp EEEECSEEEE--EECSSCEEEEEEEEEEEEEE---TTCCEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEEeCCCccc--ccCCceEEEEEEeCEEEEEE---CCCCEEEECCCCEEEECCCCcEEEEeCCC
Confidence 5566898764 34789999999999999987 22367999999999999999999999863
No 144
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.28 E-value=2.7e-06 Score=76.68 Aligned_cols=71 Identities=14% Similarity=0.211 Sum_probs=58.2
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
.+.+..+.+.|| ..|||....|++||++|++.+++= + +. ..|++||++
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~~---g------------------------~~--~~l~~GD~i 103 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRHE---G------------------------ET--MIAKAGDVM 103 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEET---T------------------------EE--EEEETTCEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEEC---C------------------------EE--EEECCCcEE
Confidence 588999999999 457887899999999999999872 2 23 479999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEEEee
Q 039441 437 IIPPGHPIALVASPNEKLLTVGFSL 461 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~F~~ 461 (539)
+||+|.+|.+.|. +++.++.+..
T Consensus 104 ~~p~g~~h~~~~~--~~~~~l~v~~ 126 (133)
T 2pyt_A 104 FIPKGSSIEFGTP--TSVRFLYVAW 126 (133)
T ss_dssp EECTTCEEEEEEE--EEEEEEEEEE
T ss_pred EECCCCEEEEEeC--CCEEEEEEEc
Confidence 9999999999874 4677776543
No 145
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.27 E-value=3.9e-06 Score=82.71 Aligned_cols=76 Identities=14% Similarity=0.208 Sum_probs=63.8
Q ss_pred ceeeEEEeeeCCCeeecc-cccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEE
Q 039441 199 DNYRLAILEANPSTLVVP-HHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKL 277 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lP-h~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l 277 (539)
.++-+.+++++|++-.-. +++...+.+||++|++.+++ +...+.|++||.+++++|.+|+++|.+ +++++++.+
T Consensus 163 ~~~~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~----~~~~~~l~~GD~~~~~~~~pH~~~n~g-~~~~~yl~~ 237 (246)
T 1sfn_A 163 FDFMVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKL----EENYYPVTAGDIIWMGAHCPQWYGALG-RNWSKYLLY 237 (246)
T ss_dssp CSEEEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEE----TTEEEEEETTCEEEECTTCCEEEEEES-SSCEEEEEE
T ss_pred CCeEEEEEEECCCCccCcccCCCceEEEEEEECEEEEEE----CCEEEEcCCCCEEEECCCCCEEEEcCC-CCCEEEEEE
Confidence 356677888899987654 56778899999999999987 346789999999999999999999998 588877665
Q ss_pred ec
Q 039441 278 LQ 279 (539)
Q Consensus 278 ~d 279 (539)
=|
T Consensus 238 kd 239 (246)
T 1sfn_A 238 KD 239 (246)
T ss_dssp EE
T ss_pred Ee
Confidence 55
No 146
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.26 E-value=2.3e-06 Score=71.15 Aligned_cols=62 Identities=13% Similarity=0.416 Sum_probs=49.4
Q ss_pred eeeEEEeeeCCCeeecccccCC-CcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecC
Q 039441 200 NYRLAILEANPSTLVVPHHSDA-ETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQD 267 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA-~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g 267 (539)
.+.+.+..+. +...+||++. .+++||++|++.+.+ .+ ..+.|.+||+++||+|++|++.|.+
T Consensus 30 ~~~~~~~~~~--~~~~~H~H~~~~e~~~v~~G~~~~~~--~~--~~~~l~~Gd~~~ip~~~~H~~~~~~ 92 (102)
T 3d82_A 30 DYQFKLVKVE--GEFVWHEHADTDEVFIVMEGTLQIAF--RD--QNITLQAGEMYVIPKGVEHKPMAKE 92 (102)
T ss_dssp TEEEEEEEEE--EECCCBCCTTCCEEEEEEESEEEEEC--SS--CEEEEETTEEEEECTTCCBEEEEEE
T ss_pred CCEEEEEEEC--CCCCceeCCCCcEEEEEEeCEEEEEE--CC--EEEEEcCCCEEEECCCCeEeeEcCC
Confidence 3445555553 4566888876 999999999998876 22 5789999999999999999999984
No 147
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.25 E-value=3e-06 Score=81.30 Aligned_cols=68 Identities=24% Similarity=0.367 Sum_probs=55.6
Q ss_pred eeecccccCCCcEEEEEeceEEEEEEeCCC-ceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEecc
Q 039441 212 TLVVPHHSDAETILVLLKGKGVITLVSHER-RESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQP 280 (539)
Q Consensus 212 ~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~-~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~ 280 (539)
+++.+|+++.++|+||++|+|.+.+-..+. .....|++||+|.||+|+.||+.+.. +..+..+-+|.+
T Consensus 95 ~~~~~H~H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~-~~~~~airlF~~ 163 (191)
T 1vr3_A 95 MFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDE-KNYVKAMRLFVG 163 (191)
T ss_dssp HHHSCEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECT-TCCEEEEEEESS
T ss_pred cCCcceECCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCC-CCCEEEEEEECC
Confidence 355678888899999999999999876533 33579999999999999999999876 466777777764
No 148
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.25 E-value=4.7e-07 Score=85.97 Aligned_cols=68 Identities=18% Similarity=0.309 Sum_probs=53.9
Q ss_pred eeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEecc
Q 039441 212 TLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQP 280 (539)
Q Consensus 212 ~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~ 280 (539)
+++.+|+|+.+++.||++|+|.+.+...+......|++||+|.||+|+.||+.+.+ +..+..+-+|.+
T Consensus 91 ~~~~~H~H~~~Ei~~Vl~G~g~~~i~~~d~~~~~~l~~GDli~IP~g~~H~~~~~~-~~~~~~ir~F~~ 158 (179)
T 1zrr_A 91 KFLNEHTHGEDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFDMGS-EPNFTAIRIFDN 158 (179)
T ss_dssp HHHSCBEESSCEEEEEEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCCCSS-CSSCEEEEEECC
T ss_pred ccccceECChheEEEEEcceEEEEEEeCCEEEEEEECCCCEEEECCCCeEeeecCC-CceEEEEEeccC
Confidence 34667888899999999999999877333333567999999999999999999866 356777777753
No 149
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.21 E-value=1.3e-06 Score=77.88 Aligned_cols=66 Identities=11% Similarity=0.162 Sum_probs=53.8
Q ss_pred ceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCC
Q 039441 199 DNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDN 268 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~ 268 (539)
..+...++++.|+.+.. |++..++++||++|++.|++ . +.+.+.|++||+++||+|++|.|.|.+.
T Consensus 47 g~~~~g~w~~~pG~~~~-~~~~~~E~~~Vl~G~~~l~~--~-~g~~~~l~~GD~~~ip~g~~h~~~~~~~ 112 (123)
T 3bcw_A 47 GKVESGVWESTSGSFQS-NTTGYIEYCHIIEGEARLVD--P-DGTVHAVKAGDAFIMPEGYTGRWEVDRH 112 (123)
T ss_dssp TTEEEEEEEEEEEEEEC-CCTTEEEEEEEEEEEEEEEC--T-TCCEEEEETTCEEEECTTCCCEEEEEEE
T ss_pred CCEEEEEEEECCCceee-EcCCCcEEEEEEEEEEEEEE--C-CCeEEEECCCCEEEECCCCeEEEEECCc
Confidence 34667788889998875 33333999999999999986 2 3457899999999999999999999863
No 150
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=98.20 E-value=2.2e-06 Score=70.97 Aligned_cols=71 Identities=30% Similarity=0.333 Sum_probs=55.2
Q ss_pred eecCccceeEecCCceEEEeeccCccccccc--CcceeeEEEeeeCCCeeecccc-cCCCcEEEEEeceEEEEEEeCCC
Q 039441 166 FHSQRFRYRVRSDSGHMRVLQRFSQKSHLLR--GIDNYRLAILEANPSTLVVPHH-SDAETILVLLKGKGVITLVSHER 241 (539)
Q Consensus 166 f~~~~f~~~v~se~G~i~vl~~f~~~s~~l~--gv~~~Rl~il~l~P~~l~lPh~-~dA~~~~yV~~G~g~i~~v~pg~ 241 (539)
|...+-...+.+..|.+.. ....+-|.|. ||+..|+-| .|+|+..||| ..|.+|+||++|++.+++|.+.+
T Consensus 4 fnl~~~~p~~~n~~G~~~~--~~~~~~P~Ln~lgls~~r~~l---~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~g 77 (79)
T 1dgw_X 4 FNLRSRDPIYSNNYGKLYE--ITPEKNSQLRDLDILLNCLQM---NEGALFVPHYNSRATVILVANEGRAEVELVGLEQ 77 (79)
T ss_dssp EETTSSCCSEECSSEEEEE--ECTTTCHHHHTTTEEEEEEEE---CTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC-
T ss_pred cccccCCCCccCCCCcEEE--EChhhCcccCcCCcceEEEEE---cCCcCcCCccCCCCcEEEEEEeceEEEEEecCCC
Confidence 4444445778899998743 3333336777 678888877 9999999997 58999999999999999999864
No 151
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.16 E-value=1e-05 Score=74.85 Aligned_cols=73 Identities=18% Similarity=0.240 Sum_probs=58.4
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
.+++.++.+. ++ ..|||....++.||++|++.+++ ++ +. ..|++||++
T Consensus 65 ~~s~g~~~~e-~~--~~~~~~~~eE~~yVLeG~~~l~i---~g------------------------~~--~~l~~GD~i 112 (151)
T 4axo_A 65 RLGCGMMEMK-ET--TFDWTLNYDEIDYVIDGTLDIII---DG------------------------RK--VSASSGELI 112 (151)
T ss_dssp SCEEEEEEEE-EE--EEEEECSSEEEEEEEEEEEEEEE---TT------------------------EE--EEEETTCEE
T ss_pred cEEEEEEEEc-Cc--cccEeCCCcEEEEEEEeEEEEEE---CC------------------------EE--EEEcCCCEE
Confidence 4788888887 33 35788899999999999999986 32 22 579999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 437 IIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
+||+|.+|.+.|. +.+.++++.+-+
T Consensus 113 ~iP~G~~h~~~n~--~~a~~l~V~~P~ 137 (151)
T 4axo_A 113 FIPKGSKIQFSVP--DYARFIYVTYPA 137 (151)
T ss_dssp EECTTCEEEEEEE--EEEEEEEEEECS
T ss_pred EECCCCEEEEEeC--CCEEEEEEECCC
Confidence 9999999999997 567777765443
No 152
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.16 E-value=1.3e-06 Score=82.88 Aligned_cols=68 Identities=13% Similarity=0.179 Sum_probs=54.5
Q ss_pred eecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcC
Q 039441 370 MMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVAS 449 (539)
Q Consensus 370 m~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~ 449 (539)
++.+|+|+. .+|.||++|+|.+.|. .++ +.+...|++||+++||+|.+|+..+.
T Consensus 92 ~~~~H~H~~-~Ei~~Vl~G~g~~~i~-~~d------------------------~~~~~~l~~GDli~IP~g~~H~~~~~ 145 (179)
T 1zrr_A 92 FLNEHTHGE-DEVRFFVEGAGLFCLH-IGD------------------------EVFQVLCEKNDLISVPAHTPHWFDMG 145 (179)
T ss_dssp HHSCBEESS-CEEEEEEESCCCCCEE-CSS------------------------CEEEEECCCSCEEEECTTCCBCCCCS
T ss_pred cccceECCh-heEEEEEcceEEEEEE-eCC------------------------EEEEEEECCCCEEEECCCCeEeeecC
Confidence 357899975 8999999999999887 322 35556799999999999999999887
Q ss_pred CCCcEEEEEEeecC
Q 039441 450 PNEKLLTVGFSLNA 463 (539)
Q Consensus 450 gne~l~~v~F~~na 463 (539)
.+..+..+-|+.++
T Consensus 146 ~~~~~~~ir~F~~~ 159 (179)
T 1zrr_A 146 SEPNFTAIRIFDNP 159 (179)
T ss_dssp SCSSCEEEEEECCG
T ss_pred CCceEEEEEeccCC
Confidence 66567777666554
No 153
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.05 E-value=2.4e-05 Score=76.25 Aligned_cols=98 Identities=23% Similarity=0.223 Sum_probs=76.4
Q ss_pred CcccCCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhH
Q 039441 333 PIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQE 412 (539)
Q Consensus 333 p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~ 412 (539)
+.|.+++|....+.+... ...-+|.+.++.|.||+....|.|+ +.|+.||++|.+.+.+-...
T Consensus 109 ~~f~~~~a~~elvGP~g~--~~s~~l~lG~v~l~PG~~yP~HsHp-~EEiy~VLsG~~e~~v~~g~-------------- 171 (217)
T 4b29_A 109 RDFLNRFGWFELAGPSGH--FLTQSLRVTVGYWGPGLDYGWHEHL-PEELYSVVSGRALFHLRNAP-------------- 171 (217)
T ss_dssp HHHHHHEEEEEEEETTSS--EECSSCEEEEEEECSSCEEEEEECS-SEEEEEEEEECEEEEETTSC--------------
T ss_pred hhHHhCceEEEEECCCCC--CCCCeEEEEEEEECCCCcCCCCCCC-CceEEEEEeCCEEEEECCCC--------------
Confidence 356677888777765433 2334699999999999999999996 78999999999999885331
Q ss_pred HHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeec
Q 039441 413 EEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLN 462 (539)
Q Consensus 413 ~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~n 462 (539)
...+.+||++++|+|.+|++.+ ++++|..+.+-+.
T Consensus 172 --------------~~~l~pGd~v~ipsgv~Ha~rt-~dePllalwvW~G 206 (217)
T 4b29_A 172 --------------DLMLEPGQTRFHPANAPHAMTT-LTDPILTLVLWRG 206 (217)
T ss_dssp --------------CEEECTTCEEEECTTCCEEEEC-CSSCEEEEEEEES
T ss_pred --------------EEecCCCCEEEcCCCCceeEEE-CCccEEEEEEEeC
Confidence 1469999999999999999985 5788865543333
No 154
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.96 E-value=3.6e-05 Score=78.58 Aligned_cols=85 Identities=18% Similarity=0.294 Sum_probs=69.6
Q ss_pred EEEeeeCCCeeeccccc-CCCcEEEEEeceEEEEEEeCCCceeeecCC-C---cEEEeCCCCeEEEEecCCCceEEEEEE
Q 039441 203 LAILEANPSTLVVPHHS-DAETILVLLKGKGVITLVSHERRESFNMEH-G---DVISVPAGTTYYLSNQDNVDRLHVAKL 277 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~-dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~-G---DV~~iPaG~~h~i~N~g~~e~L~iv~l 277 (539)
..+.+++|+..+--||+ +..+++||++|+++|.+=++...+.+.+.. | |+++||+|.+|.|.|.+ +++|+++.+
T Consensus 274 ~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~-~~~~~~~~~ 352 (369)
T 3st7_A 274 VSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLG-DTDMVTIMW 352 (369)
T ss_dssp EEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEECS-SSCEEEEEE
T ss_pred EEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEEcC-CCcEEEEEe
Confidence 34556699999999965 566999999999999998887777788877 8 99999999999999998 468988888
Q ss_pred eccCC---CCCCce
Q 039441 278 LQPVN---TPGQFR 288 (539)
Q Consensus 278 ~d~~n---~pg~f~ 288 (539)
.+..- .|.+|.
T Consensus 353 ~~~~y~~~~~d~~~ 366 (369)
T 3st7_A 353 VNEMFDPNQPDTYF 366 (369)
T ss_dssp ESSCCCSSSCCCEE
T ss_pred cCcccCCCCCcccc
Confidence 87653 355553
No 155
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=97.96 E-value=2.5e-05 Score=76.07 Aligned_cols=75 Identities=16% Similarity=0.184 Sum_probs=62.5
Q ss_pred ceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 199 DNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
..+++.++.|.|++..-.|.+.+++++||++|.+.+.+ ++...+.+.+||++++|+|++|++-+ + +++|.++.+.
T Consensus 130 ~~l~lG~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v---~~g~~~~l~pGd~v~ipsgv~Ha~rt-~-dePllalwvW 204 (217)
T 4b29_A 130 QSLRVTVGYWGPGLDYGWHEHLPEELYSVVSGRALFHL---RNAPDLMLEPGQTRFHPANAPHAMTT-L-TDPILTLVLW 204 (217)
T ss_dssp SSCEEEEEEECSSCEEEEEECSSEEEEEEEEECEEEEE---TTSCCEEECTTCEEEECTTCCEEEEC-C-SSCEEEEEEE
T ss_pred CeEEEEEEEECCCCcCCCCCCCCceEEEEEeCCEEEEE---CCCCEEecCCCCEEEcCCCCceeEEE-C-CccEEEEEEE
Confidence 46778888889999977777889999999999998887 33468899999999999999999985 4 4788655554
No 156
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=97.92 E-value=1.4e-05 Score=68.64 Aligned_cols=69 Identities=10% Similarity=0.043 Sum_probs=51.6
Q ss_pred eeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEE
Q 039441 358 AGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFI 437 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~v 437 (539)
+.+....+.||... ||-...+++||++|++.+.+- ++ +. ..|++||+++
T Consensus 31 ~~~~~~~~~pg~~~---~hH~~~E~~~Vl~G~~~~~i~--~g------------------------~~--~~l~~GD~i~ 79 (101)
T 1o5u_A 31 EKWPIWEKEVSEFD---WYYDTNETCYILEGKVEVTTE--DG------------------------KK--YVIEKGDLVT 79 (101)
T ss_dssp GGSCEEEECSEEEE---EECSSCEEEEEEEEEEEEEET--TC------------------------CE--EEEETTCEEE
T ss_pred eEEEEEEeCCCccc---ccCCceEEEEEEeCEEEEEEC--CC------------------------CE--EEECCCCEEE
Confidence 44556778888753 334689999999999999873 12 12 5799999999
Q ss_pred eCCCCeEEEEcCCCCcEEEE
Q 039441 438 IPPGHPIALVASPNEKLLTV 457 (539)
Q Consensus 438 VPaG~~h~i~n~gne~l~~v 457 (539)
||+|.+|.+.|.++....++
T Consensus 80 ip~g~~H~~~n~~~~~~~yv 99 (101)
T 1o5u_A 80 FPKGLRCRWKVLEPVRKHYN 99 (101)
T ss_dssp ECTTCEEEEEEEEEEEEEEE
T ss_pred ECCCCcEEEEeCCCeeEEEE
Confidence 99999999999765444443
No 157
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.88 E-value=4.4e-05 Score=77.95 Aligned_cols=81 Identities=20% Similarity=0.212 Sum_probs=65.4
Q ss_pred eeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCC---c
Q 039441 358 AGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPG---V 434 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~G---D 434 (539)
..+...++.||.+...|||.+..++++|++|++.+.+-++... +.+...+. | +
T Consensus 272 ~q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~-----------------------~~~~~~~~-~~~~~ 327 (369)
T 3st7_A 272 GQVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDD-----------------------EIIEYYVS-GDKLE 327 (369)
T ss_dssp CEEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCC-----------------------CCEEEEEE-TTBCC
T ss_pred ceEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCC-----------------------cEEEEEec-CCcce
Confidence 3456778899999999999999999999999999988755431 23433332 6 9
Q ss_pred EEEeCCCCeEEEEcCCCCcEEEEEEeec
Q 039441 435 VFIIPPGHPIALVASPNEKLLTVGFSLN 462 (539)
Q Consensus 435 V~vVPaG~~h~i~n~gne~l~~v~F~~n 462 (539)
+++||.|+.|.+.|.++++++++.+.+.
T Consensus 328 ~~~ip~g~~h~~~n~~~~~~~~~~~~~~ 355 (369)
T 3st7_A 328 VVDIPVGYTHNIENLGDTDMVTIMWVNE 355 (369)
T ss_dssp EEEECTTEEEEEEECSSSCEEEEEEESS
T ss_pred EEEeCCCceEEeEEcCCCcEEEEEecCc
Confidence 9999999999999999889988875433
No 158
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=97.86 E-value=4.5e-05 Score=71.81 Aligned_cols=59 Identities=20% Similarity=0.347 Sum_probs=52.7
Q ss_pred CCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecC
Q 039441 209 NPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQD 267 (539)
Q Consensus 209 ~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g 267 (539)
.||+-..=|+++.++++||++|..+|.+.+.|......|++||++.+|+|++|+-+..+
T Consensus 43 Gpn~r~d~H~h~~dE~FyvlkG~m~i~v~d~g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 43 GPNHRTDYHDDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp SCBCCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred CCCcCccCcCCCCceEEEEEeeEEEEEEEcCCceeeEEECCCCEEEeCCCCCcCccccC
Confidence 46777777888999999999999999999877677899999999999999999998764
No 159
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=97.82 E-value=0.00011 Score=68.18 Aligned_cols=94 Identities=19% Similarity=0.187 Sum_probs=68.5
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
+..++++.+.||+.+.+|.|+. .+.+||++|...+ ..++ ..+.+||.+
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~---~e~~----------------------------~~~~~Gd~~ 88 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHTG-TVIVYTVQGSWRY---KEHD----------------------------WVAHAGSVV 88 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEESS-CEEEEEEESCEEE---TTSS----------------------------CCBCTTCEE
T ss_pred CeEEEEEEECCCCCcccccCCC-CEEEEEEEeEEEE---eCCC----------------------------eEECCCeEE
Confidence 4788999999999999999965 7889999999864 2221 258999999
Q ss_pred EeCCCCeEEEEcC--CCCcEEEEEEeecCCCCccccccccchhcccCcHHHH
Q 039441 437 IIPPGHPIALVAS--PNEKLLTVGFSLNARNNQRNFLAGKINIMNQVERETM 486 (539)
Q Consensus 437 vVPaG~~h~i~n~--gne~l~~v~F~~na~n~~~~fLAG~~svL~~~p~evL 486 (539)
+.|+|..|...+. +++++.++...+.+ ..|+....++++-++....
T Consensus 89 ~~P~g~~H~~~~~~~~~e~~~~~~~~~G~----l~~~~~~g~~~~~~d~~~~ 136 (159)
T 3ebr_A 89 YETASTRHTPQSAYAEGPDIITFNIVAGE----LLYLDDKDNIIAVENWKTS 136 (159)
T ss_dssp EECSSEEECEEESSSSSSCEEEEEEEESC----EEEECTTCCEEEEECHHHH
T ss_pred EECCCCcceeEeCCCCCCCEEEEEEecCc----cEecCCCCCEEEEcCHHHH
Confidence 9999999999997 67787766645443 1233333445544444333
No 160
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=97.82 E-value=3e-05 Score=69.00 Aligned_cols=72 Identities=15% Similarity=0.141 Sum_probs=54.7
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
.+.+....++||.... |+|. ..+++||++|++.+.+- ++ .. ..|++||++
T Consensus 48 ~~~~g~w~~~pG~~~~-~~~~-~~E~~~Vl~G~~~l~~~--~g------------------------~~--~~l~~GD~~ 97 (123)
T 3bcw_A 48 KVESGVWESTSGSFQS-NTTG-YIEYCHIIEGEARLVDP--DG------------------------TV--HAVKAGDAF 97 (123)
T ss_dssp TEEEEEEEEEEEEEEC-CCTT-EEEEEEEEEEEEEEECT--TC------------------------CE--EEEETTCEE
T ss_pred CEEEEEEEECCCceee-EcCC-CcEEEEEEEEEEEEEEC--CC------------------------eE--EEECCCCEE
Confidence 4888899999998753 5542 28999999999998762 33 12 469999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEE
Q 039441 437 IIPPGHPIALVASPNEKLLTVG 458 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~ 458 (539)
+||+|.+|.+.|.+.....++.
T Consensus 98 ~ip~g~~h~~~~~~~~rK~yv~ 119 (123)
T 3bcw_A 98 IMPEGYTGRWEVDRHVKKIYFV 119 (123)
T ss_dssp EECTTCCCEEEEEEEEEEEEEE
T ss_pred EECCCCeEEEEECCceeEEEEE
Confidence 9999999999997554334443
No 161
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=97.72 E-value=0.0001 Score=65.93 Aligned_cols=59 Identities=15% Similarity=0.268 Sum_probs=48.0
Q ss_pred cccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEE
Q 039441 215 VPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKL 277 (539)
Q Consensus 215 lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l 277 (539)
-||.++.-++.||++|+|.+.+ ...++.|++||++.||+|++|++.+.+++.+...+.+
T Consensus 32 ~p~~h~~~~i~~v~~G~~~~~i----~~~~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i 90 (164)
T 2arc_A 32 RPLGMKGYILNLTIRGQGVVKN----QGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWV 90 (164)
T ss_dssp ETTCCSSEEEEEEEEECEEEEE----TTEEEEECTTCEEEECTTCCEEEEECTTSSEEEEEEE
T ss_pred cccCCCceEEEEEEEeEEEEEE----CCEEEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEE
Confidence 4888999999999999999987 3368999999999999999999998753244443333
No 162
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=97.64 E-value=0.00016 Score=68.11 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=51.1
Q ss_pred CCCeeecccccCCCcEEEEEeceEEEEEEeCC----CceeeecCCCcEEEeCCCCeEEEEecC
Q 039441 209 NPSTLVVPHHSDAETILVLLKGKGVITLVSHE----RRESFNMEHGDVISVPAGTTYYLSNQD 267 (539)
Q Consensus 209 ~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg----~~~~~~v~~GDV~~iPaG~~h~i~N~g 267 (539)
.||+-.-=||.+.++|+||++|..+|.+.+.| ......|++||++.+|+|++|+=+-..
T Consensus 42 GPn~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~ 104 (176)
T 1zvf_A 42 GPNERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRFA 104 (176)
T ss_dssp SSBCCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEECT
T ss_pred CCCcCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcccC
Confidence 46675666789999999999999999999966 346799999999999999999997764
No 163
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=97.61 E-value=7.9e-05 Score=67.79 Aligned_cols=98 Identities=7% Similarity=-0.095 Sum_probs=64.1
Q ss_pred eeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEE
Q 039441 358 AGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFI 437 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~v 437 (539)
-.+.++.+.||+.+.+|+|+. .+.+||++|+.... .+. ......|++||.++
T Consensus 44 ~~~~~~~~~pG~~~p~H~H~~-~ee~~VL~G~~~~~----~g~-----------------------~~~~~~~~~Gd~~~ 95 (145)
T 2o1q_A 44 SWTAIFDCPAGSSFAAHVHVG-PGEYFLTKGKMDVR----GGK-----------------------AAGGDTAIAPGYGY 95 (145)
T ss_dssp EEEEEEEECTTEEECCEEESS-CEEEEEEEEEEEET----TCG-----------------------GGTSEEEESSEEEE
T ss_pred cEEEEEEECCCCCCCccCCCC-CEEEEEEEeEEEEc----CCC-----------------------EecceEeCCCEEEE
Confidence 468889999999999999975 56699999999852 220 01125689999999
Q ss_pred eCCCCeEE-EEcCCCCcEEEEEEeecCCCCccccccccchhcccCcHHHHHHH
Q 039441 438 IPPGHPIA-LVASPNEKLLTVGFSLNARNNQRNFLAGKINIMNQVERETMEVA 489 (539)
Q Consensus 438 VPaG~~h~-i~n~gne~l~~v~F~~na~n~~~~fLAG~~svL~~~p~evLa~A 489 (539)
+|+|..|. ..+. ++..++.+++.+ ..|+....+...-++......+
T Consensus 96 ~p~g~~H~p~~~~--e~~~~l~~~~gp----~~f~~~~g~~~~~~d~~~~~~~ 142 (145)
T 2o1q_A 96 ESANARHDKTEFP--VASEFYMSFLGP----LTFVKPDGSPIAVIGWEDAQGA 142 (145)
T ss_dssp ECTTCEESCCEEE--EEEEEEEEEESC----EEEECTTSCEEEEECHHHHHHH
T ss_pred ECcCCccCCeECC--CCeEEEEEECCc----ceecCCCCCEeEEecHHHHHHh
Confidence 99999999 4333 345555444333 1344333444444554444443
No 164
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=97.59 E-value=0.00017 Score=65.53 Aligned_cols=71 Identities=11% Similarity=-0.066 Sum_probs=55.9
Q ss_pred eEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCcee--eecCCCcEEEeCCCCeEE-EEecCCCceEEEEEEe
Q 039441 202 RLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRES--FNMEHGDVISVPAGTTYY-LSNQDNVDRLHVAKLL 278 (539)
Q Consensus 202 Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~--~~v~~GDV~~iPaG~~h~-i~N~g~~e~L~iv~l~ 278 (539)
.+++++++|++.+-+|.|...+.+||++|+... ...... ..|++||.+++|+|..|. ..+.+ .+.++.++
T Consensus 45 ~~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~----~~g~~~~~~~~~~Gd~~~~p~g~~H~p~~~~e---~~~~l~~~ 117 (145)
T 2o1q_A 45 WTAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDV----RGGKAAGGDTAIAPGYGYESANARHDKTEFPV---ASEFYMSF 117 (145)
T ss_dssp EEEEEEECTTEEECCEEESSCEEEEEEEEEEEE----TTCGGGTSEEEESSEEEEECTTCEESCCEEEE---EEEEEEEE
T ss_pred EEEEEEECCCCCCCccCCCCCEEEEEEEeEEEE----cCCCEecceEeCCCEEEEECcCCccCCeECCC---CeEEEEEE
Confidence 467788899999999988889999999999974 233334 789999999999999999 55543 35555555
Q ss_pred c
Q 039441 279 Q 279 (539)
Q Consensus 279 d 279 (539)
+
T Consensus 118 ~ 118 (145)
T 2o1q_A 118 L 118 (145)
T ss_dssp E
T ss_pred C
Confidence 5
No 165
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=97.55 E-value=0.01 Score=58.64 Aligned_cols=180 Identities=14% Similarity=0.123 Sum_probs=111.0
Q ss_pred eeCCCeeeccc-ccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCC--CeEEEEecCCCceEEEEEEeccCCC
Q 039441 207 EANPSTLVVPH-HSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAG--TTYYLSNQDNVDRLHVAKLLQPVNT 283 (539)
Q Consensus 207 ~l~P~~l~lPh-~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG--~~h~i~N~g~~e~L~iv~l~d~~n~ 283 (539)
.+.|++-+-|| |.+-+-|.||++|...-. +. .-....|++|||-.+-|| +.|.-.|..+++.|+++-|.-.
T Consensus 47 ~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS-~Gn~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlWv~--- 120 (242)
T 1tq5_A 47 VIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DS-MGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWIM--- 120 (242)
T ss_dssp EECTTCEEEEEEECSCEEEEEEEESEEEEE--ES-SSCEEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEEEC---
T ss_pred eeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eC-CCCcEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEEEEc---
Confidence 34887655677 899999999999974321 21 124567999999999666 8899999765567776654421
Q ss_pred CCCceeccccCccEEEcChhhhhhcCccccccCCCCCCCCcceecCCCCCcccCCCceEEEeC-CcccccccccceeEEE
Q 039441 284 PGQFRVQQRQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPFNLLSRKPIYNNNFGRFFEAT-PKDYQQLQEIDAGVTY 362 (539)
Q Consensus 284 pg~f~~~~q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fnl~~~~p~~sn~~G~i~~~~-~~~fP~L~~l~isva~ 362 (539)
| . . +...| .|.-.. -|... .|++.... ..+-|.-...++.+..
T Consensus 121 P-----------------~-~-k~~~P--------------~y~~~~-~p~~~--~g~~iag~~g~~~p~~~~~~~~~~~ 164 (242)
T 1tq5_A 121 P-----------------E-E-NGITP--------------RYEQRR-FDAVQ--GKQLVLSPDARDGSLKVHQDMELYR 164 (242)
T ss_dssp C-----------------S-S-CSCCC--------------EEEEEC-CCCCS--SEEEEEESSCGGGCEECSSSCEEEE
T ss_pred c-----------------h-h-cCCCC--------------cceeec-CCchh--CCEEEEecCCCCCcEeccCCCEEEE
Confidence 1 1 0 11111 111111 11111 23322221 1122332334688888
Q ss_pred EEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCC
Q 039441 363 VEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGH 442 (539)
Q Consensus 363 v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~ 442 (539)
+.|.+|+-+.....+.-.-++||++|++.+ ++ ..|.+||.+++..+-
T Consensus 165 ~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v-----~g----------------------------~~l~~gd~~~~~~~~ 211 (242)
T 1tq5_A 165 WALLKDEQSVHQIAAERRVWIQVVKGNVTI-----NG----------------------------VKASTSDGLAIWDEQ 211 (242)
T ss_dssp EEECTTCEEEECCCTTCEEEEEEEESEEEE-----TT----------------------------EEEETTCEEEEESCS
T ss_pred EEECCCCEEEeecCCCcEEEEEEccCcEEE-----CC----------------------------EEeCCCCEEEECCCC
Confidence 999999977554444556789999999876 22 148899999998887
Q ss_pred eEEEEcCCCCcEEEEEEeecC
Q 039441 443 PIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 443 ~h~i~n~gne~l~~v~F~~na 463 (539)
...+.|. ++..+|.|....
T Consensus 212 ~l~l~a~--~~a~~Ll~~~~~ 230 (242)
T 1tq5_A 212 AISIHAD--SDSEVLLFDLPP 230 (242)
T ss_dssp CEEEEES--SSEEEEEEEECC
T ss_pred eEEEEeC--CCCEEEEEECCc
Confidence 7777774 456666665443
No 166
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=97.55 E-value=0.00014 Score=69.58 Aligned_cols=71 Identities=11% Similarity=-0.032 Sum_probs=59.0
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEec
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQ 279 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d 279 (539)
..++.++++.|++.+.+|.|...++.||++|.-. + +...+.+||.+++|+|+.|...+.+ .+.+.++.++|
T Consensus 124 ~~~v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~----d----e~~~~~~Gd~~~~p~g~~H~p~a~~-~~gc~~l~~~d 194 (195)
T 2q1z_B 124 EAIARLLWIPGGQAVPDHGHRGLELTLVLQGAFR----D----ETDRFGAGDIEIADQELEHTPVAER-GLDCICLAATD 194 (195)
T ss_dssp SSEEEEEEECTTCBCCCCCCSSCEEEEEEESEEE----C----SSSEEETTCEEEECSSCCCCCEECS-SSCEEEEEEEC
T ss_pred CcEEEEEEECCCCCCCCcCCCCeEEEEEEEEEEE----C----CcEEECCCeEEEeCcCCccCCEeCC-CCCEEEEEEec
Confidence 4577889999999999998899999999999833 2 3468999999999999999999975 35677766664
No 167
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.50 E-value=0.013 Score=58.37 Aligned_cols=191 Identities=14% Similarity=0.119 Sum_probs=114.4
Q ss_pred Ccceee-EEEeeeCCCeeeccc-ccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCC--CeEEEEecCCCceE
Q 039441 197 GIDNYR-LAILEANPSTLVVPH-HSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAG--TTYYLSNQDNVDRL 272 (539)
Q Consensus 197 gv~~~R-l~il~l~P~~l~lPh-~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG--~~h~i~N~g~~e~L 272 (539)
+....| +.-.++.|++-+-|| |.+-+-|.||++|...-. +. .-....|++|||-.+-|| +.|.-.|..+++.|
T Consensus 59 ~fg~l~vln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS-~Gn~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l 135 (256)
T 2vec_A 59 GYASLRVLNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DS-EGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPL 135 (256)
T ss_dssp SCCCEEEEEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ET-TSCEEEEETTEEEEECCCTTCCEEEEECCSSSCE
T ss_pred cCCceEeccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eC-CCCEEEECCCeEEEEECCCCeEEEEEECCCCceE
Confidence 444444 233445887666677 888889999999984322 21 234677999999999776 68999998656778
Q ss_pred EEEEEeccCCCCCCceeccccCccEEEcChhhhhhcCccccccCCCCCCCCcceecCCCCCcccCCCceEEEe-CCcccc
Q 039441 273 HVAKLLQPVNTPGQFRVQQRQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPFNLLSRKPIYNNNFGRFFEA-TPKDYQ 351 (539)
Q Consensus 273 ~iv~l~d~~n~pg~f~~~~q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fnl~~~~p~~sn~~G~i~~~-~~~~fP 351 (539)
+++-|.-. ++.... .|.- ..+.+. + ...++..- +..+-|
T Consensus 136 ~~lQlWi~-------------------l~p~~~---~P~y-----------q~~~~p---~----~~~~lIag~~G~~~p 175 (256)
T 2vec_A 136 TRMQLWLD-------------------ACPQRE---NPLI-----------QKLALN---M----GKQQLIASPEGAMGS 175 (256)
T ss_dssp EEEEEEEE-------------------CCTTSC---CCSE-----------EEEECC---C----SSEEEEEESSCGGGC
T ss_pred EEEEEEEe-------------------CChhcC---CCCc-----------eEEcCC---C----CCEEEEEeCCCCCCc
Confidence 77665531 100000 0000 001111 0 01121111 111223
Q ss_pred cccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeC
Q 039441 352 QLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLS 431 (539)
Q Consensus 352 ~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~ 431 (539)
.--..++.+..+.|.+|+-+.....++- -++||++|++.|. ... .-...|.
T Consensus 176 ~~~~~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~--g~~--------------------------~~~~~l~ 226 (256)
T 2vec_A 176 LQLRQQVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHAL--THH--------------------------EEKAALT 226 (256)
T ss_dssp EECSSSCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEE--ETT--------------------------EEEEEEC
T ss_pred eEccCCcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEEC--Ccc--------------------------ccceEEC
Confidence 2223468888899999998765554333 8899999988763 111 0123589
Q ss_pred CCcEEEeCCCCeEEEEcCCCCcEEEEEEee
Q 039441 432 PGVVFIIPPGHPIALVASPNEKLLTVGFSL 461 (539)
Q Consensus 432 ~GDV~vVPaG~~h~i~n~gne~l~~v~F~~ 461 (539)
+||.++|-.+-...+.+. ++..+|.|..
T Consensus 227 ~gd~~~l~~~~~l~l~a~--~~a~~LL~dl 254 (256)
T 2vec_A 227 CGDGAFIRDEANITLVAD--SPLRALLIDL 254 (256)
T ss_dssp TTCEEEEESCSEEEEEES--SSEEEEEEEE
T ss_pred CCCEEEECCCCeEEEEeC--CCCEEEEEEe
Confidence 999999988877777774 4567766553
No 168
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=97.48 E-value=0.028 Score=56.47 Aligned_cols=200 Identities=14% Similarity=0.100 Sum_probs=112.7
Q ss_pred CcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeC-----C-CceeeecCCCcEEEeCCCCeEEEEecCCCc
Q 039441 197 GIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSH-----E-RRESFNMEHGDVISVPAGTTYYLSNQDNVD 270 (539)
Q Consensus 197 gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~p-----g-~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e 270 (539)
|..-+.+.+++|+|+.-+.-.--+-...+.++.|++.|++=.. + ....|+=.+.|.++||.|+..-|...++
T Consensus 25 ~~~y~~f~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~~~g~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~~-- 102 (270)
T 2qjv_A 25 GWEYVGFDVWQLXAGESITLPSDERERCLVLVAGLASVXAADSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAETD-- 102 (270)
T ss_dssp TSSSCEEEEEEECTTCEEEECCSSEEEEEEEEESCEEEEETTEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESSS--
T ss_pred CcEEeEEEEEEecCCCEEEecCCCcEEEEEEecceEEEEECCEEEeccccccccccCCCCcEEEECCCCEEEEEecCC--
Confidence 5555667778889988766555566667778899999987210 0 1112222236999999999888888763
Q ss_pred eEEEEEEeccCCCCCCceeccccCccEEEcChhhhhhcCccccccCCCCCCCCcceecCCCCCcccCCCceEEEeCCccc
Q 039441 271 RLHVAKLLQPVNTPGQFRVQQRQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPFNLLSRKPIYNNNFGRFFEATPKDY 350 (539)
Q Consensus 271 ~L~iv~l~d~~n~pg~f~~~~q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fnl~~~~p~~sn~~G~i~~~~~~~f 350 (539)
++|+..--+... .|. ...++.+++.... .+.+ +| --.|..+-..++
T Consensus 103 -~~~~v~sAp~~~--~~p--------~r~i~~~d~~~~~-------rG~g---------------~n-~R~V~~i~~~~~ 148 (270)
T 2qjv_A 103 -LELAVCSAPGFG--ELP--------VRLISPQEVGVEH-------RGXG---------------RN-QRLVHNILPDSQ 148 (270)
T ss_dssp -EEEEEEEEECCS--CCC--------CEEECGGGSEEEE-------ESSG---------------GG-CEEEEEEECTTS
T ss_pred -ceEEEEeeecCC--cCC--------cEEECHHHCCeEe-------ccCc---------------cc-hhhhhhhcCCCC
Confidence 554443333221 000 0111111111000 0000 11 112323222234
Q ss_pred ccccccceeEEEEEEcCCcee---cceecCCC--C------EEEEE-Ee---ceEEEEEecCCCCccchhhhhhhhHHHH
Q 039441 351 QQLQEIDAGVTYVEINQGGMM---VPHYNSKA--T------TIVLV-VE---GRGRFEMGGPLSSRWSQESQREQQEEEE 415 (539)
Q Consensus 351 P~L~~l~isva~v~L~pGgm~---~PHwhpnA--~------ei~yV-~~---G~g~v~vV~p~gs~~s~~~~~g~~~~~~ 415 (539)
|. -.|-|..+ |+|||.- .||-|... . |+.|. +. |-|.--|..++++-
T Consensus 149 ~a---~~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~-------------- 210 (270)
T 2qjv_A 149 LA---DSLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSL-------------- 210 (270)
T ss_dssp CC---SSCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSS--------------
T ss_pred Cc---ceEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCC--------------
Confidence 43 34667766 9999987 99999754 5 88876 43 44544444444321
Q ss_pred HHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEe
Q 039441 416 EEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 416 ~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~ 460 (539)
-.+..|+-||+++||.|+ |-..+...-.+=+|-+.
T Consensus 211 ---------de~~~V~~~d~VlvP~Gy-Hp~~a~pGy~~YylwvM 245 (270)
T 2qjv_A 211 ---------DECMAVYNRDVVXVPXGY-HPVATIAGYDNYYLNVM 245 (270)
T ss_dssp ---------EEEEEEETTCEEEESSSB-CCEEECTTCEEEEEEEE
T ss_pred ---------ceEEEEECCCEEecCCCc-CCCcCCCCcccEEEEEE
Confidence 124789999999999999 88766533333355433
No 169
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=97.48 E-value=0.00025 Score=65.84 Aligned_cols=73 Identities=14% Similarity=0.178 Sum_probs=58.9
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEec--CCCceEEEEEE
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQ--DNVDRLHVAKL 277 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~--g~~e~L~iv~l 277 (539)
...++++++.|++.+-+|.|...+.+||++|+.... .. ...+.+||.++.|+|+.|...+. + ++.++++.+
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~---e~---~~~~~~Gd~~~~P~g~~H~~~~~~~~-~e~~~~~~~ 113 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRYK---EH---DWVAHAGSVVYETASTRHTPQSAYAE-GPDIITFNI 113 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEESSCEEEEEEESCEEET---TS---SCCBCTTCEEEECSSEEECEEESSSS-SSCEEEEEE
T ss_pred CeEEEEEEECCCCCcccccCCCCEEEEEEEeEEEEe---CC---CeEECCCeEEEECCCCcceeEeCCCC-CCCEEEEEE
Confidence 466788889999999999888899999999997642 21 14799999999999999999998 5 366766554
Q ss_pred ec
Q 039441 278 LQ 279 (539)
Q Consensus 278 ~d 279 (539)
.+
T Consensus 114 ~~ 115 (159)
T 3ebr_A 114 VA 115 (159)
T ss_dssp EE
T ss_pred ec
Confidence 44
No 170
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=97.47 E-value=0.00028 Score=67.42 Aligned_cols=70 Identities=17% Similarity=0.159 Sum_probs=57.6
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
+..+.++.+.||+.+.+|+| ...++.||++|.-. +.. ..+.+||.+
T Consensus 124 ~~~v~l~~~~pG~~~p~H~H-~g~E~~~VL~G~f~----de~-----------------------------~~~~~Gd~~ 169 (195)
T 2q1z_B 124 EAIARLLWIPGGQAVPDHGH-RGLELTLVLQGAFR----DET-----------------------------DRFGAGDIE 169 (195)
T ss_dssp SSEEEEEEECTTCBCCCCCC-SSCEEEEEEESEEE----CSS-----------------------------SEEETTCEE
T ss_pred CcEEEEEEECCCCCCCCcCC-CCeEEEEEEEEEEE----CCc-----------------------------EEECCCeEE
Confidence 46778999999999999999 57799999999843 221 358999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEEEe
Q 039441 437 IIPPGHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~F~ 460 (539)
++|.|..|...+.++++..++.+.
T Consensus 170 ~~p~g~~H~p~a~~~~gc~~l~~~ 193 (195)
T 2q1z_B 170 IADQELEHTPVAERGLDCICLAAT 193 (195)
T ss_dssp EECSSCCCCCEECSSSCEEEEEEE
T ss_pred EeCcCCccCCEeCCCCCEEEEEEe
Confidence 999999999999766777766543
No 171
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=97.46 E-value=0.00051 Score=62.52 Aligned_cols=70 Identities=7% Similarity=0.036 Sum_probs=53.5
Q ss_pred CCceecceecCCCCEEEEEEeceEEEEEecCC-CCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEE
Q 039441 367 QGGMMVPHYNSKATTIVLVVEGRGRFEMGGPL-SSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIA 445 (539)
Q Consensus 367 pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~-gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~ 445 (539)
++++...|-|.++++++||++|+.++.+-... .+. .--.-.|++|++++||+|.-|.
T Consensus 38 ~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~----------------------~d~~V~l~~Ge~yvVPkGveH~ 95 (140)
T 3d0j_A 38 IEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKF----------------------NIELTLMEKGKVYNVPAECWFY 95 (140)
T ss_dssp TTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEE----------------------EEEEEECCTTCCEEECTTCEEE
T ss_pred cccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCC----------------------ccceEEecCCCEEEeCCCccCc
Confidence 44788889999999999999999999988531 100 1223579999999999999999
Q ss_pred EEcCCCCcEEEEEEe
Q 039441 446 LVASPNEKLLTVGFS 460 (539)
Q Consensus 446 i~n~gne~l~~v~F~ 460 (539)
-.+.. ...++-|.
T Consensus 96 p~a~~--e~~vLLiE 108 (140)
T 3d0j_A 96 SITQK--DTKMMYVQ 108 (140)
T ss_dssp EEECT--TCEEEEEE
T ss_pred ccCCC--ceEEEEEE
Confidence 99964 35555444
No 172
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=97.44 E-value=0.00068 Score=61.72 Aligned_cols=56 Identities=27% Similarity=0.392 Sum_probs=45.7
Q ss_pred eeeccc-ccCCCcEEEEEeceEEEEEEeCCC----ceeeecCCCcEEEeCCCCeEEEEecC
Q 039441 212 TLVVPH-HSDAETILVLLKGKGVITLVSHER----RESFNMEHGDVISVPAGTTYYLSNQD 267 (539)
Q Consensus 212 ~l~lPh-~~dA~~~~yV~~G~g~i~~v~pg~----~~~~~v~~GDV~~iPaG~~h~i~N~g 267 (539)
.+.-.| |.+.|+++||++|+.+|-+-+.+. -....+++|+++.||+|+-|--....
T Consensus 40 ~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~ 100 (140)
T 3d0j_A 40 GIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQK 100 (140)
T ss_dssp TCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECT
T ss_pred cCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCC
Confidence 444444 889999999999999999875321 23688999999999999999998865
No 173
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=97.44 E-value=0.00037 Score=65.13 Aligned_cols=74 Identities=14% Similarity=0.116 Sum_probs=58.2
Q ss_pred eeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCC-CceEEEEEEec
Q 039441 201 YRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDN-VDRLHVAKLLQ 279 (539)
Q Consensus 201 ~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~-~e~L~iv~l~d 279 (539)
..+.++++.|++.+-+|.|...+.+||++|+.... +. ..+.+.+||.+++|+|+.|...+..+ .+.+.++.+.+
T Consensus 43 ~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~f~~~----~~-~~~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l~v~~ 117 (165)
T 3cjx_A 43 LMVMRASFAPGLTLPLHFHTGTVHMYTISGCWYYT----EY-PGQKQTAGCYLYEPGGSIHQFNTPRDNEGQTEVIFMLS 117 (165)
T ss_dssp EEEEEEEECTTCBCCEEEESSCEEEEEEESEEEET----TC-TTSCEETTEEEEECTTCEECEECCTTCSSCEEEEEEEE
T ss_pred cEEEEEEECCCCcCCcccCCCCEEEEEEEEEEEEC----CC-ceEEECCCeEEEeCCCCceeeEeCCCCCCCcEEEEEEe
Confidence 45778889999999999999999999999998752 21 14678999999999999999999653 33665554443
No 174
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=97.36 E-value=0.0012 Score=58.87 Aligned_cols=62 Identities=18% Similarity=0.253 Sum_probs=47.5
Q ss_pred ecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCC
Q 039441 371 MVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASP 450 (539)
Q Consensus 371 ~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~g 450 (539)
..||.| +..+|+||++|+|.+.+ ++ + ...|++||+++||+|.+|...+.+
T Consensus 31 ~~p~~h-~~~~i~~v~~G~~~~~i---~~------------------------~--~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 31 DRPLGM-KGYILNLTIRGQGVVKN---QG------------------------R--EFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp EETTCC-SSEEEEEEEEECEEEEE---TT------------------------E--EEEECTTCEEEECTTCCEEEEECT
T ss_pred ccccCC-CceEEEEEEEeEEEEEE---CC------------------------E--EEEecCCeEEEEcCCCCEEEEeCC
Confidence 358887 78899999999999977 21 1 257999999999999999988865
Q ss_pred C-CcEEEEEEeec
Q 039441 451 N-EKLLTVGFSLN 462 (539)
Q Consensus 451 n-e~l~~v~F~~n 462 (539)
+ ++..++.+..+
T Consensus 81 ~~~~~~~~~i~f~ 93 (164)
T 2arc_A 81 EAREWYHQWVYFR 93 (164)
T ss_dssp TSSEEEEEEEEEC
T ss_pred CCCcEEEEEEEEC
Confidence 3 55655544433
No 175
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=97.30 E-value=0.001 Score=62.79 Aligned_cols=93 Identities=14% Similarity=0.102 Sum_probs=63.2
Q ss_pred eeEEEEEEcCCceecceecCC------CCEEEEEEeceEEEEEecCCCCccch---hhhhhhhHHHHHHhhhcceeeE-E
Q 039441 358 AGVTYVEINQGGMMVPHYNSK------ATTIVLVVEGRGRFEMGGPLSSRWSQ---ESQREQQEEEEEEESSRELQKI-S 427 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhpn------A~ei~yV~~G~g~v~vV~p~gs~~s~---~~~~g~~~~~~~e~~~~~y~~~-~ 427 (539)
...-.+.|.||.+.+.|+||. -.|=.+|+.|.+++.+ .+...... -. .|. ...|.+- .
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~--~g~~~~~~~v~v~-dg~---------~~~~~a~~~ 120 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYV--EGEKTPLPKVLPP-QED---------REHYTVWHE 120 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEE--SSSCCSSCSCCCC-GGG---------GGGCCCCEE
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEE--CCccccCcceecc-CCc---------eeeecCCcE
Confidence 778899999999999999999 8888889999977766 32110000 00 000 0011111 1
Q ss_pred eeeCCCcEEEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 428 ANLSPGVVFIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 428 ~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
-.|++||.+.||+|.+|++.|. .+++.+..|.+..
T Consensus 121 i~L~pGesvtIppg~~H~f~ag-eegvli~EvSt~~ 155 (175)
T 2y0o_A 121 IELEPGGQYTIPPNTKHWFQAG-EEGAVVTEMSSTS 155 (175)
T ss_dssp EEECTTCEEEECTTCCEEEEEE-EEEEEEEEEEECC
T ss_pred EEECCCCEEEECCCCcEEEEeC-CCCEEEEEEeCCC
Confidence 3699999999999999999994 3456666665543
No 176
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=97.30 E-value=0.0016 Score=61.33 Aligned_cols=59 Identities=14% Similarity=0.167 Sum_probs=49.2
Q ss_pred cCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEE
Q 039441 366 NQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIA 445 (539)
Q Consensus 366 ~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~ 445 (539)
.||+-+.=|.| ...++.||++|...+.+.+.+ +.-+..|++||+|+||+|.+|.
T Consensus 43 Gpn~r~d~H~h-~~dE~FyvlkG~m~i~v~d~g-------------------------~~~~v~l~eGE~f~lP~gvpH~ 96 (174)
T 1yfu_A 43 GPNHRTDYHDD-PLEEFFYQLRGNAYLNLWVDG-------------------------RRERADLKEGDIFLLPPHVRHS 96 (174)
T ss_dssp SCBCCCCEEEC-SSCEEEEEEESCEEEEEEETT-------------------------EEEEEEECTTCEEEECTTCCEE
T ss_pred CCCcCccCcCC-CCceEEEEEeeEEEEEEEcCC-------------------------ceeeEEECCCCEEEeCCCCCcC
Confidence 46666777877 899999999999999999853 2334689999999999999999
Q ss_pred EEcCC
Q 039441 446 LVASP 450 (539)
Q Consensus 446 i~n~g 450 (539)
-.+.+
T Consensus 97 P~r~~ 101 (174)
T 1yfu_A 97 PQRPE 101 (174)
T ss_dssp EEBCC
T ss_pred ccccC
Confidence 88864
No 177
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.28 E-value=0.0058 Score=57.61 Aligned_cols=82 Identities=13% Similarity=0.007 Sum_probs=62.1
Q ss_pred EEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeC---CCcEEEeC
Q 039441 363 VEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLS---PGVVFIIP 439 (539)
Q Consensus 363 v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~---~GDV~vVP 439 (539)
....+|.++..|||..-.++++|++|+..+-+|+-...+..- . +.....|. ....++||
T Consensus 58 s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTf----------------g--~~~~v~Ls~~~n~~~L~IP 119 (174)
T 3ejk_A 58 SEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTS----------------G--RLAQVTLGRPDNYRLLRIP 119 (174)
T ss_dssp EEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTT----------------T--CEEEEEEETTTBCEEEEEC
T ss_pred EECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCC----------------C--eEEEEEECCccCceEEEeC
Confidence 345799999999998899999999999999999864311000 0 24456676 67899999
Q ss_pred CCCeEEEEcCCCCcEEEEEEeec
Q 039441 440 PGHPIALVASPNEKLLTVGFSLN 462 (539)
Q Consensus 440 aG~~h~i~n~gne~l~~v~F~~n 462 (539)
+|++|-+.+.++++..++.+.+.
T Consensus 120 ~G~aHgf~~lsd~~av~ly~~s~ 142 (174)
T 3ejk_A 120 PQVWYGFAATGDTPALVANCTDI 142 (174)
T ss_dssp TTCEEEEEECTTSCEEEEEEESS
T ss_pred CCcEEEEEEccCCCEEEEEECCC
Confidence 99999999987756776655443
No 178
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=97.23 E-value=0.0012 Score=61.59 Aligned_cols=74 Identities=11% Similarity=0.119 Sum_probs=57.4
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
+..+.++.+.||+.+.+|+|+ ..+.+||++|....+ .++ +..+.+||.+
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~f~~~---~~~---------------------------~~~~~aGd~~ 90 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHT-GTVHMYTISGCWYYT---EYP---------------------------GQKQTAGCYL 90 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEES-SCEEEEEEESEEEET---TCT---------------------------TSCEETTEEE
T ss_pred CcEEEEEEECCCCcCCcccCC-CCEEEEEEEEEEEEC---CCc---------------------------eEEECCCeEE
Confidence 467899999999999999995 579999999998762 111 1357999999
Q ss_pred EeCCCCeEEEEcCC--CCcEEEEEEee
Q 039441 437 IIPPGHPIALVASP--NEKLLTVGFSL 461 (539)
Q Consensus 437 vVPaG~~h~i~n~g--ne~l~~v~F~~ 461 (539)
++|+|..|...+.. +++..+|.+.+
T Consensus 91 ~~P~g~~H~~~a~~~~~~gci~l~v~~ 117 (165)
T 3cjx_A 91 YEPGGSIHQFNTPRDNEGQTEVIFMLS 117 (165)
T ss_dssp EECTTCEECEECCTTCSSCEEEEEEEE
T ss_pred EeCCCCceeeEeCCCCCCCcEEEEEEe
Confidence 99999999999964 23564444333
No 179
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.20 E-value=0.0014 Score=57.95 Aligned_cols=63 Identities=17% Similarity=0.308 Sum_probs=49.9
Q ss_pred eeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecC
Q 039441 201 YRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQD 267 (539)
Q Consensus 201 ~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g 267 (539)
+...+-+..|+.+.... ...++++||++|+++|+.- ..+...|++||+++||+|..--|.-..
T Consensus 42 ~~~GvWe~tPG~~~~~~-~~~~E~~~iLeG~~~lt~d---dG~~~~l~aGD~~~~P~G~~gtWev~e 104 (116)
T 3es4_A 42 TIVAVWMAEPGIYNYAG-RDLEETFVVVEGEALYSQA---DADPVKIGPGSIVSIAKGVPSRLEILS 104 (116)
T ss_dssp CEEEEEEECSEEEEECC-CSEEEEEEEEECCEEEEET---TCCCEEECTTEEEEECTTCCEEEEECS
T ss_pred EEEEEEecCCceeECee-CCCcEEEEEEEeEEEEEeC---CCeEEEECCCCEEEECCCCeEEEEEeE
Confidence 34556677999988754 3345999999999999852 245789999999999999998886654
No 180
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=97.03 E-value=0.0068 Score=56.89 Aligned_cols=87 Identities=13% Similarity=0.131 Sum_probs=69.2
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
++.+..+...||.-..+|=|.++.-+++|++|+...++....+.. .. ..-...|.+||++
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~-------------------~~-~~~~~~l~~G~~~ 127 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEH-------------------AE-LSNSYFVHEGECL 127 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSS-------------------EE-EEEEEEEETTCEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCc-------------------ee-ecceEEeCCCcEE
Confidence 468889999999999999998899999999999999887543210 00 1234578999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 437 IIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
++|.+.+|.+.|.++++.+.|-+..-+
T Consensus 128 ~~~~~~iH~V~N~~~~~aVSlHvY~pp 154 (171)
T 3eqe_A 128 ISTKGLIHKMSNPTSERMVSLHVYSPP 154 (171)
T ss_dssp EECTTCEEEEECCSSSCEEEEEEEESC
T ss_pred EeCCCCEEEEECCCCCCEEEEEEeCCC
Confidence 999999999999988877777655443
No 181
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=97.03 E-value=0.0025 Score=60.20 Aligned_cols=78 Identities=14% Similarity=0.230 Sum_probs=55.8
Q ss_pred eeeEEEeeeCCCeeecccccC-------CCcEEEEEeceEEEEEEeCCCc-------------------eeeecCCCcEE
Q 039441 200 NYRLAILEANPSTLVVPHHSD-------AETILVLLKGKGVITLVSHERR-------------------ESFNMEHGDVI 253 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~d-------A~~~~yV~~G~g~i~~v~pg~~-------------------~~~~v~~GDV~ 253 (539)
.|-..+|.+.|+...-.|+|. -.+=++|+.|.+.+.+ ++.. ....|++||.+
T Consensus 52 ~Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~--~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesv 129 (175)
T 2y0o_A 52 RYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYV--EGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQY 129 (175)
T ss_dssp SEEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEE--SSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEE
T ss_pred CceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEE--CCccccCcceeccCCceeeecCCcEEEECCCCEE
Confidence 488888999998877777443 3466669999977766 4422 23489999999
Q ss_pred EeCCCCeEEEEecCCCceEEEEEEeccCC
Q 039441 254 SVPAGTTYYLSNQDNVDRLHVAKLLQPVN 282 (539)
Q Consensus 254 ~iPaG~~h~i~N~g~~e~L~iv~l~d~~n 282 (539)
.||+|+.||+.|.. +. .+|.-+.+.|
T Consensus 130 tIppg~~H~f~age--eg-vli~EvSt~~ 155 (175)
T 2y0o_A 130 TIPPNTKHWFQAGE--EG-AVVTEMSSTS 155 (175)
T ss_dssp EECTTCCEEEEEEE--EE-EEEEEEEECC
T ss_pred EECCCCcEEEEeCC--CC-EEEEEEeCCC
Confidence 99999999999932 22 4455555444
No 182
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=96.98 E-value=0.0043 Score=58.27 Aligned_cols=81 Identities=16% Similarity=0.315 Sum_probs=64.8
Q ss_pred eeeEEEeeeCCCeeeccc-ccCCCcEEEEEeceEEEEEEeC-CC-c---eeeecCCCcEEEeCCCCeEEEEecCCCceEE
Q 039441 200 NYRLAILEANPSTLVVPH-HSDAETILVLLKGKGVITLVSH-ER-R---ESFNMEHGDVISVPAGTTYYLSNQDNVDRLH 273 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh-~~dA~~~~yV~~G~g~i~~v~p-g~-~---~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~ 273 (539)
.+-|.+|...|+..--+| |.++..+++|++|+.+.++-.. ++ . .+..+.+||++++|+|.+|.+.|.++ +..+
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~-~~aV 146 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTS-ERMV 146 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSS-SCEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCC-CCEE
Confidence 456777788999999888 7788999999999999886542 22 1 35678999999999999999999985 6776
Q ss_pred EEEEeccC
Q 039441 274 VAKLLQPV 281 (539)
Q Consensus 274 iv~l~d~~ 281 (539)
.|-+.-+.
T Consensus 147 SlHvY~pp 154 (171)
T 3eqe_A 147 SLHVYSPP 154 (171)
T ss_dssp EEEEEESC
T ss_pred EEEEeCCC
Confidence 66666543
No 183
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=96.97 E-value=0.0026 Score=62.80 Aligned_cols=64 Identities=17% Similarity=0.413 Sum_probs=52.6
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecC
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQD 267 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g 267 (539)
.+...+.+..|+. ..+.+++.++++||++|+++|+. . .-+...+++||+++||+|+.--|.-..
T Consensus 166 ~~~~GiW~~tpG~-~~~~~~~~~E~~~ILeG~v~lt~--~-~G~~~~~~aGD~~~~P~G~~~tWev~e 229 (238)
T 3myx_A 166 TLRIGVWDSTPYE-RISRPHKIHELMNLIEGRVVLSL--E-NGSSLTVNTGDTVFVAQGAPCKWTSTG 229 (238)
T ss_dssp SCEEEEEEECCEE-BCCEECSSCEEEEEEECCEEEEE--T-TSCEEEECTTCEEEECTTCEEEEEESS
T ss_pred CEEEeEEEeCCCE-EECCcCCCCEEEEEEEeEEEEEe--C-CCCEEEECCCCEEEECCCCEEEEEECc
Confidence 4566778889988 55667789999999999999974 2 345789999999999999998888764
No 184
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=96.93 E-value=0.011 Score=55.58 Aligned_cols=87 Identities=16% Similarity=0.216 Sum_probs=68.5
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceE-EEEEEeCCCce-e----eecCCCcE--EEeCCCCeEEEEecCCCceEEE
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKG-VITLVSHERRE-S----FNMEHGDV--ISVPAGTTYYLSNQDNVDRLHV 274 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g-~i~~v~pg~~~-~----~~v~~GDV--~~iPaG~~h~i~N~g~~e~L~i 274 (539)
.+.+-|.++.+-..|-.+|++|.|...|.+ .+.++.+++.. + -+|..|++ ++||+|+.+...+.++ ..+.|
T Consensus 51 ~IYfLL~~g~~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G~wqaa~~~~g-~~~LV 129 (170)
T 1yud_A 51 SIYFLLRTGEVSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQD-GFSLV 129 (170)
T ss_dssp EEEEEEETTCCEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTTCEEEEEESSS-SEEEE
T ss_pred EEEEEECCCCCCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCCCEEEEEECCC-CcEEE
Confidence 334445888888888889999999999997 78888887653 2 36889999 9999999999999853 67777
Q ss_pred EEEeccCCCCCCceec
Q 039441 275 AKLLQPVNTPGQFRVQ 290 (539)
Q Consensus 275 v~l~d~~n~pg~f~~~ 290 (539)
-++..|+.....|.+.
T Consensus 130 ~C~VaPGF~f~dfel~ 145 (170)
T 1yud_A 130 GCMVSPGFTFDDFELF 145 (170)
T ss_dssp EEEESSCCCGGGCCBC
T ss_pred EEEECCCccCCceEEc
Confidence 8888877666666653
No 185
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=96.91 E-value=0.024 Score=53.20 Aligned_cols=114 Identities=14% Similarity=0.180 Sum_probs=79.3
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceE-EEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRG-RFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g-~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
..++.+.-|.+|.....|-+ +|+||-|...|.+ .+.++.+++.. .-.++-.+|..|++
T Consensus 48 ~~T~IYfLL~~g~~S~~HRv-~sdEiW~~~~G~pL~l~l~~~dg~~--------------------~~~~LG~dv~~Ge~ 106 (170)
T 1yud_A 48 LWSSIYFLLRTGEVSHFHRL-TADEMWYFHAGQSLTIYMISPEGEL--------------------TTAQLGLDLAAGER 106 (170)
T ss_dssp SCEEEEEEEETTCCEEEEEC-SSCEEEEEEEESCEEEEEECTTSCE--------------------EEEEESSCTTTTEE
T ss_pred cceEEEEEECCCCCCeeEEc-CCCEEEEEEcCCCEEEEEEcCCCCE--------------------EEEEeCCCcccCce
Confidence 36778888999998888876 7999999999996 88899998631 00234456889999
Q ss_pred --EEeCCCCeEEEEcCCCCcEEEEEEeecCCCCc-cccccccchhcccCcHHHHHHHcCCCHHHHHHhh
Q 039441 436 --FIIPPGHPIALVASPNEKLLTVGFSLNARNNQ-RNFLAGKINIMNQVERETMEVAFNVPARLIERVF 501 (539)
Q Consensus 436 --~vVPaG~~h~i~n~gne~l~~v~F~~na~n~~-~~fLAG~~svL~~~p~evLa~AF~vs~e~v~kL~ 501 (539)
+|||+|..+...+.+. +..+|+-.+.+-+.- .+-| ++++.|.+.|---.+.|.+|-
T Consensus 107 pQ~vVP~G~wqaa~~~~g-~~~LV~C~VaPGF~f~dfel---------~~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 107 PQFLVPKGCIFGSAMNQD-GFSLVGCMVSPGFTFDDFEL---------FSQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp SCEEECTTCEEEEEESSS-SEEEEEEEESSCCCGGGCCB---------CBHHHHHHSCCTTHHHHTTSC
T ss_pred eEEEECCCCEEEEEECCC-CcEEEEEEECCCccCCceEE---------cCHHHHHhHCchhHHHHHHhh
Confidence 9999999999988732 455554455542211 1122 356666666766566666654
No 186
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=96.72 E-value=0.045 Score=58.50 Aligned_cols=64 Identities=23% Similarity=0.492 Sum_probs=43.4
Q ss_pred eeEEEEEEc--CCc-eecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCc
Q 039441 358 AGVTYVEIN--QGG-MMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGV 434 (539)
Q Consensus 358 isva~v~L~--pGg-m~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GD 434 (539)
+++.++++. +++ ... .......|++|++|+|.+.. .++ ..-...|++||
T Consensus 357 F~v~~~~~~~~~~~~~~~--~~~~~~~illv~~G~g~i~~--~~~------------------------~~~~~~l~~G~ 408 (440)
T 1pmi_A 357 FSVLQTIFDKSKGGKQVI--EGLNGPSIVIATNGKGTIQI--TGD------------------------DSTKQKIDTGY 408 (440)
T ss_dssp CEEEEEECCTTTCCEEEE--CCCSSCEEEEEEESEEEEEE--TTC------------------------GGGCEEEETTC
T ss_pred EEEEEEEecCCCCceeEE--ecCCCcEEEEEEeCeEEEEe--CCc------------------------ccceEEeccCC
Confidence 677778887 443 222 23367899999999999865 111 00003689999
Q ss_pred EEEeCCCCeEEEEcC
Q 039441 435 VFIIPPGHPIALVAS 449 (539)
Q Consensus 435 V~vVPaG~~h~i~n~ 449 (539)
+|+||++..+.+.+.
T Consensus 409 ~~fvpa~~~~~i~g~ 423 (440)
T 1pmi_A 409 VFFVAPGSSIELTAD 423 (440)
T ss_dssp EEEECTTCCEEEEEC
T ss_pred EEEEeCCCcEEEEEe
Confidence 999999976666664
No 187
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=96.69 E-value=0.0075 Score=56.77 Aligned_cols=68 Identities=13% Similarity=0.128 Sum_probs=48.7
Q ss_pred CCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEE
Q 039441 367 QGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIAL 446 (539)
Q Consensus 367 pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i 446 (539)
||.-+-=|+| ...++.||++|...+.+.+.+.+. . +..+..|++||+|++|+|.+|.-
T Consensus 43 Pn~r~D~H~~-~~eE~Fy~lkG~m~l~v~d~g~~~-------------------~--~~~dv~i~eGdmfllP~gvpHsP 100 (176)
T 1zvf_A 43 PNERTDYHIN-PTPEWFYQKKGSMLLKVVDETDAE-------------------P--KFIDIIINEGDSYLLPGNVPHSP 100 (176)
T ss_dssp SBCCSCEEEC-SSCEEEEEEESCEEEEEEECSSSS-------------------C--EEEEEEECTTEEEEECTTCCEEE
T ss_pred CCcCCcCcCC-CCceEEEEEeCEEEEEEEcCCCcc-------------------c--ceeeEEECCCCEEEcCCCCCcCC
Confidence 4454445543 689999999999999999853111 0 13456899999999999999998
Q ss_pred EcCCCCcEEEE
Q 039441 447 VASPNEKLLTV 457 (539)
Q Consensus 447 ~n~gne~l~~v 457 (539)
.+.. +...+|
T Consensus 101 ~r~~-e~v~lv 110 (176)
T 1zvf_A 101 VRFA-DTVGIV 110 (176)
T ss_dssp EECT-TCEEEE
T ss_pred cccC-CcEEEE
Confidence 7763 334433
No 188
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=96.67 E-value=0.0082 Score=64.20 Aligned_cols=162 Identities=16% Similarity=0.212 Sum_probs=90.0
Q ss_pred ccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccC-CC-------------
Q 039441 218 HSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPV-NT------------- 283 (539)
Q Consensus 218 ~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~-n~------------- 283 (539)
-+|.++++|+.+|++.|.... =...|++||+++||.|+.|.+.=.+ ..+..|+=++... ..
T Consensus 175 NaDGD~Livpq~G~l~i~TEf----G~L~v~pgei~VIPRGi~frv~l~~-p~Rgyi~E~~g~~f~LP~lGpiGanglan 249 (471)
T 1eyb_A 175 NSDGDFLIVPQKGNLLIYTEF----GKMLVQPNEICVIQRGMRFSIDVFE-ETRGYILEVYGVHFELPDLGPIGANGLAN 249 (471)
T ss_dssp ESSEEEEEEEEESCEEEEETT----EEEEECTTEEEEECTTCCEEEECSS-SEEEEEEEEESCCEECCCCGGGTTSCBSC
T ss_pred cCCCCEEEEEEeCCEEEEEec----ccEEeccCCEEEECCccEEEEeeCC-CceEEEEEccCCccccccccccccCCccC
Confidence 378899999999999887522 1467999999999999999987665 4445455444421 11
Q ss_pred CCCcee-----c--ccc--CccEEEcChhhhhhcC----ccccccCCCCCCCCcceecCCCCCcccCCCceEEEeCCccc
Q 039441 284 PGQFRV-----Q--QRQ--QGTIKRASQEQLKALS----HHASSRRRHGRGSTAPFNLLSRKPIYNNNFGRFFEATPKDY 350 (539)
Q Consensus 284 pg~f~~-----~--~q~--~G~Ivrv~~eql~~l~----~~~~~~~~~~~~~~~~fnl~~~~p~~sn~~G~i~~~~~~~f 350 (539)
|..|.. . ..+ --+|+|.... +.... |-.-- .|.+.-.++.|||..-.|+-+.. .--.++.-|
T Consensus 250 ~RDF~~PvA~~ed~~~~~~~~vv~K~~G~-l~~~~~~hsPfDVV-aWhGn~~PYkydl~~F~pI~svs---~dH~dPSIf 324 (471)
T 1eyb_A 250 PRDFLIPIAWYEDRQVPGGYTVINKYQGK-LFAAKQDVSPFNVV-AWHGNYTPYKYNLKNFMVINSVA---FDHADPSIF 324 (471)
T ss_dssp GGGEEEECCCCCCCEEEEEEEEEEEETTE-EEEEEEEECSCCEE-EEEESCCCEEEEGGGCBCCCCSS---SSCCCGGGG
T ss_pred hhhccCccccccccCCCccEEEEEEeCCe-eEEEecCCCCceEE-eEcCcccCeEechHHcccccccc---cccCCCCcc
Confidence 222322 0 011 1245555322 32221 11001 12233467788887655543310 011122222
Q ss_pred ccccc----cceeEE-------EEEEcCCceecceecCCC-CEEEEEEece
Q 039441 351 QQLQE----IDAGVT-------YVEINQGGMMVPHYNSKA-TTIVLVVEGR 389 (539)
Q Consensus 351 P~L~~----l~isva-------~v~L~pGgm~~PHwhpnA-~ei~yV~~G~ 389 (539)
-.|.. -|+.+. +-...++++..|.||.|. .|+++.+.|.
T Consensus 325 tVltaps~~pg~av~dFViFpPRw~v~e~TfrpPyyHrNv~SEfmgli~G~ 375 (471)
T 1eyb_A 325 TVLTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGH 375 (471)
T ss_dssp EEEEEECSSTTCEEEEEEEECSEEECCSSSCCSCCCBCCSCEEEEEECCC-
T ss_pred eEEEccCCCCCceEEeEeecCCccCCCCCccCCCCCccchhhhhhhhcccc
Confidence 22222 123322 225789999999999984 5699999987
No 189
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=96.62 E-value=0.014 Score=51.50 Aligned_cols=69 Identities=17% Similarity=0.211 Sum_probs=50.4
Q ss_pred eeEEEEEEcCCceecceecCCCC-EEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 358 AGVTYVEINQGGMMVPHYNSKAT-TIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhpnA~-ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
+.+..=..+||.+...+ ..+ |++|||+|++.++.- +|. . .+|++||++
T Consensus 42 ~~~GvWe~tPG~~~~~~---~~~~E~~~iLeG~~~lt~d--dG~------------------------~--~~l~aGD~~ 90 (116)
T 3es4_A 42 TIVAVWMAEPGIYNYAG---RDLEETFVVVEGEALYSQA--DAD------------------------P--VKIGPGSIV 90 (116)
T ss_dssp CEEEEEEECSEEEEECC---CSEEEEEEEEECCEEEEET--TCC------------------------C--EEECTTEEE
T ss_pred EEEEEEecCCceeECee---CCCcEEEEEEEeEEEEEeC--CCe------------------------E--EEECCCCEE
Confidence 45556689999886433 444 999999999999764 331 1 469999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEEE
Q 039441 437 IIPPGHPIALVASPNEKLLTVGF 459 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~F 459 (539)
+||+|+.-.+.-. +.+.=+.|
T Consensus 91 ~~P~G~~gtWev~--e~vrK~~~ 111 (116)
T 3es4_A 91 SIAKGVPSRLEIL--SSFRKLAT 111 (116)
T ss_dssp EECTTCCEEEEEC--SCEEEEEE
T ss_pred EECCCCeEEEEEe--EEEeEEEE
Confidence 9999999888665 34544444
No 190
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=96.58 E-value=0.015 Score=56.20 Aligned_cols=83 Identities=12% Similarity=0.076 Sum_probs=64.6
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEec--CCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCc
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGG--PLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGV 434 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~--p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GD 434 (539)
.+.+..+...||.-..+|-|.+ ..+++|++|....++.. +++.. - -..-...|.+|+
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~~--------l------------~~~~~~~l~~G~ 136 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGRP--------V------------LHGEPTRLEPGH 136 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSCE--------E------------ECSCCEEECTTC
T ss_pred CEEEEEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCCCCcc--------c------------cccceEEeCCCC
Confidence 4788899999999999999986 89999999999999865 22210 0 000135699999
Q ss_pred EEEeCC--CCeEEEEcC-CCCcEEEEEEe
Q 039441 435 VFIIPP--GHPIALVAS-PNEKLLTVGFS 460 (539)
Q Consensus 435 V~vVPa--G~~h~i~n~-gne~l~~v~F~ 460 (539)
|++|+. |..|-+.|. ++++...|-+.
T Consensus 137 v~~~~~~~g~iH~V~N~~~~~~avsLHvY 165 (208)
T 2gm6_A 137 VEAVSPTVGDIHRVHNAYDDRVSISIHVY 165 (208)
T ss_dssp EEEEBTTTBCCEEEEESCSSSCEEEEEEE
T ss_pred EEEECCCCCCeEEeccCCCCCcEEEEEEE
Confidence 999999 999999987 67777777544
No 191
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=96.50 E-value=0.036 Score=50.39 Aligned_cols=100 Identities=12% Similarity=0.090 Sum_probs=71.4
Q ss_pred eeEecCCceEEEeeccCcccccccCcceeeEEEeee-CCCeeeccc-ccCCCcEEEEEeceEEEEEEeCCCceeeecCCC
Q 039441 173 YRVRSDSGHMRVLQRFSQKSHLLRGIDNYRLAILEA-NPSTLVVPH-HSDAETILVLLKGKGVITLVSHERRESFNMEHG 250 (539)
Q Consensus 173 ~~v~se~G~i~vl~~f~~~s~~l~gv~~~Rl~il~l-~P~~l~lPh-~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~G 250 (539)
+.+..+-|.+.+++.++.-. | ...|+..+.- .|+..+=+| |....+++++++|+..|.+-+.....++.|...
T Consensus 11 ~~i~D~RG~L~~~e~~~~ip--f---~ikRvy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~~~~~~L~~~ 85 (141)
T 2pa7_A 11 KKIIDSRGSLVAIEENKNIP--F---SIKRVYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNIIQEITLDSP 85 (141)
T ss_dssp CEEEETTEEEEEEETTTTSS--S---CCCEEEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECSSCEEEEEECCT
T ss_pred CcEecCCCcEEEEeccCCCC--C---CccEEEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECCcEEEEEEECCC
Confidence 45677889998877633211 2 2345555443 588899999 888999999999999999944334556777555
Q ss_pred c-EEEeCCCCeEEEEecCCCceEEEEEEec
Q 039441 251 D-VISVPAGTTYYLSNQDNVDRLHVAKLLQ 279 (539)
Q Consensus 251 D-V~~iPaG~~h~i~N~g~~e~L~iv~l~d 279 (539)
+ .+.||+|+.|-+.|.+++ .+++.+.+
T Consensus 86 ~~gL~IppgvWh~~~~~s~~--avllvlas 113 (141)
T 2pa7_A 86 AVGLYVGPAVWHEMHDFSSD--CVMMVLAS 113 (141)
T ss_dssp TEEEEECTTCEEEEECCCTT--CEEEEEES
T ss_pred CcEEEeCCCEEEEEEEcCCC--eEEEEECC
Confidence 4 499999999999999753 44455544
No 192
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=96.44 E-value=0.12 Score=51.93 Aligned_cols=183 Identities=15% Similarity=0.184 Sum_probs=109.0
Q ss_pred CCCeeeccc-ccCCCcEEEEEeceEEEEEEeCC-CceeeecCCCcEEEeCCCC--eEEEEecCCCceEEEEEEeccCCCC
Q 039441 209 NPSTLVVPH-HSDAETILVLLKGKGVITLVSHE-RRESFNMEHGDVISVPAGT--TYYLSNQDNVDRLHVAKLLQPVNTP 284 (539)
Q Consensus 209 ~P~~l~lPh-~~dA~~~~yV~~G~g~i~~v~pg-~~~~~~v~~GDV~~iPaG~--~h~i~N~g~~e~L~iv~l~d~~n~p 284 (539)
.|++=+-|| |.+-+-|.||++|.. .+.+ .-..-.|++|||-.+-||. .|.=.|.. +..++.+-|.-
T Consensus 47 ~~~~gf~~HPHrg~EtVTyvl~G~~----~H~DS~Gn~~~i~~GdvQwMtAG~GI~HsE~~~~-~~~~~~lQlWv----- 116 (277)
T 2p17_A 47 FERGTFDVHPHRGIETVTYVISGEL----EHFDSKAGHSTLGPGDVQWMTAGRGVVHKEDPAS-GSTVHSLQLWV----- 116 (277)
T ss_dssp ECTTCCCCEEECSEEEEEEEEESCE----EEEETTTEEEEECTTCEEEEECTTCEEEEEEECT-TCCEEEEEEEE-----
T ss_pred CCCCCCCCCCCCCcEEEEEEEEeEE----EEeeCCCCceEECCCeEEEEeCCCCEEEEeecCC-CCCEEEEEEEe-----
Confidence 455545566 899999999999983 2222 1245679999999999865 68888875 46666544332
Q ss_pred CCceeccccCccEEEcChhhhhhcCccccccCCCCCCCCcce-ecCC-CCCcccCCCceEEEeC----Ccccccccccce
Q 039441 285 GQFRVQQRQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPF-NLLS-RKPIYNNNFGRFFEAT----PKDYQQLQEIDA 358 (539)
Q Consensus 285 g~f~~~~q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~f-nl~~-~~p~~sn~~G~i~~~~----~~~fP~L~~l~i 358 (539)
.++.. .+...| .| .+.. .-|.+...++.+..+- ..+-|.--..++
T Consensus 117 --------------nLP~~-~k~~~P--------------~y~~~~~~~ip~~~~~g~~~rviaG~~~g~~~p~~~~~~~ 167 (277)
T 2p17_A 117 --------------NLPSA-YKMTEP--------------RYQNLRSKDMPVRKEEGATIRVFSGSSKGVKAPTKNIVPV 167 (277)
T ss_dssp --------------ECCGG-GTTCCC--------------EEEEECGGGSCEEEETTEEEEEEESEETTEECCCCCSSCE
T ss_pred --------------eCChh-hcCCCC--------------cceeeccccCCeeeeCCeEEEEEEcCccCCCCceecCCCC
Confidence 12211 011111 11 1111 1122222233333322 112233234468
Q ss_pred eEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe
Q 039441 359 GVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII 438 (539)
Q Consensus 359 sva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV 438 (539)
.+..+.|.+|+-+.-...+.-.-++||++|.+.+ + +. ...|.+||.+++
T Consensus 168 ~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v---~--g~--------------------------~~~l~~~d~~~~ 216 (277)
T 2p17_A 168 TMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVF---G--AD--------------------------NIEGKAGQALFF 216 (277)
T ss_dssp EEEEEEECTTCEEEEEEETTCEEEEEEEESEEEE---T--TT--------------------------TEEEETTEEEEE
T ss_pred EEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEE---C--CC--------------------------ceEeCCCcEEEE
Confidence 8889999999988666555567899999999766 1 10 024889999999
Q ss_pred CC-C----CeEEEEcCCCCcEEEEEEeecC
Q 039441 439 PP-G----HPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 439 Pa-G----~~h~i~n~gne~l~~v~F~~na 463 (539)
.. | -...+.|.. +..+|.|.-.+
T Consensus 217 ~~~~~~~~~~l~l~a~~--~a~~Ll~~G~P 244 (277)
T 2p17_A 217 SRHNRGEETELNVTARE--KLRLLLYAGEP 244 (277)
T ss_dssp CCCCTTCEEEEEEEESS--SEEEEEEEECC
T ss_pred cCCCCCccceEEEEeCC--CcEEEEEeccc
Confidence 86 7 666677753 46666655443
No 193
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=96.42 E-value=0.0095 Score=59.95 Aligned_cols=54 Identities=13% Similarity=0.156 Sum_probs=44.7
Q ss_pred ecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCC
Q 039441 371 MVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVASP 450 (539)
Q Consensus 371 ~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~g 450 (539)
.-=| |....|+.|+++|...+.|++.+ +.-+-.|++|++|++|+|.+|.=.+..
T Consensus 44 ~d~H-~~~~dE~FyqlkG~m~l~~~d~g-------------------------~~~~V~i~eGemfllP~gv~HsP~r~~ 97 (286)
T 2qnk_A 44 KDYH-IEEGEEVFYQLEGDMVLRVLEQG-------------------------KHRDVVIRQGEIFLLPARVPHSPQRFA 97 (286)
T ss_dssp CCEE-ECSSCEEEEEEESCEEEEEEETT-------------------------EEEEEEECTTEEEEECTTCCEEEEECT
T ss_pred ccCc-CCCCCeEEEEEeCeEEEEEEeCC-------------------------ceeeEEECCCeEEEeCCCCCcCCcccC
Confidence 5446 55789999999999999999853 233468999999999999999988864
No 194
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=96.40 E-value=0.047 Score=49.65 Aligned_cols=101 Identities=12% Similarity=0.082 Sum_probs=67.8
Q ss_pred cccCCCceEEEeCC-cccccccccceeEEEEE-EcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhh
Q 039441 334 IYNNNFGRFFEATP-KDYQQLQEIDAGVTYVE-INQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQ 411 (539)
Q Consensus 334 ~~sn~~G~i~~~~~-~~fP~L~~l~isva~v~-L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~ 411 (539)
.+...-|.+..+.. .+.|. . . -.+..+. +.||..+.+|.|...++++++++|+..|.+-+...
T Consensus 12 ~i~D~RG~L~~~e~~~~ipf-~-i-kRvy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~------------ 76 (141)
T 2pa7_A 12 KIIDSRGSLVAIEENKNIPF-S-I-KRVYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNI------------ 76 (141)
T ss_dssp EEEETTEEEEEEETTTTSSS-C-C-CEEEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECSSC------------
T ss_pred cEecCCCcEEEEeccCCCCC-C-c-cEEEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECCcE------------
Confidence 34445677777765 34443 1 1 2333333 44899999999999999999999999998833211
Q ss_pred HHHHHHhhhcceeeEEeeeCC-CcEEEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 412 EEEEEEESSRELQKISANLSP-GVVFIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 412 ~~~~~e~~~~~y~~~~~~L~~-GDV~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
.-+..|.+ -..+.||+|..|.+.+.+.. .+++.|....
T Consensus 77 -------------~~~~~L~~~~~gL~IppgvWh~~~~~s~~-avllvlas~~ 115 (141)
T 2pa7_A 77 -------------IQEITLDSPAVGLYVGPAVWHEMHDFSSD-CVMMVLASDY 115 (141)
T ss_dssp -------------EEEEEECCTTEEEEECTTCEEEEECCCTT-CEEEEEESSC
T ss_pred -------------EEEEEECCCCcEEEeCCCEEEEEEEcCCC-eEEEEECCCC
Confidence 22234543 34699999999999998654 6666655443
No 195
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=96.38 E-value=0.54 Score=47.46 Aligned_cols=189 Identities=14% Similarity=0.095 Sum_probs=109.4
Q ss_pred eCCCeeeccc-ccCCCcEEEEE-eceEEEEEEeCCCceeeecCCCcEEEeCCCC--eEEEEecCCCceEEEEEEeccCCC
Q 039441 208 ANPSTLVVPH-HSDAETILVLL-KGKGVITLVSHERRESFNMEHGDVISVPAGT--TYYLSNQDNVDRLHVAKLLQPVNT 283 (539)
Q Consensus 208 l~P~~l~lPh-~~dA~~~~yV~-~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~--~h~i~N~g~~e~L~iv~l~d~~n~ 283 (539)
+.|++-+-|| |.+-+-|.||+ +|...-- +. --..-.|++|||-.+-||. .|.=.|.+ +..++.+-|.-
T Consensus 47 ~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~--DS-~Gn~~~i~~GdvQwMtAG~GI~HsE~~~~-~~~~~~lQlWv---- 118 (290)
T 1j1l_A 47 GGRPGGFPDHPHRGFETVSYLLEGGSMAHE--DF-CGHTGKMNPGDLQWMTAGRGILHAEMPCS-EEPAHGLQLWV---- 118 (290)
T ss_dssp ECTTCBEEEEEEBSEEEEEEECSSSCEEEE--ET-TSCEEEECTTCEEEEECTTCEEEEEEECS-SSCEEEEEEEE----
T ss_pred cCCCCCCCCCCCCCeEEEEEECcceEEEEe--eC-CCCceEECCCcEEEEeCCCCEEEEeEcCC-CCCEEEEEEEe----
Confidence 3566445666 88888888988 7764321 11 1235679999999998865 57778874 46676555442
Q ss_pred CCCceeccccCccEEEcChhhhhhcCccccccCCCCCCCCccee-cCC-CCCcccCCCceEEEeCCcc----cccccccc
Q 039441 284 PGQFRVQQRQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPFN-LLS-RKPIYNNNFGRFFEATPKD----YQQLQEID 357 (539)
Q Consensus 284 pg~f~~~~q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fn-l~~-~~p~~sn~~G~i~~~~~~~----fP~L~~l~ 357 (539)
.++.. .+.+.| .|. +.. .-|.....+..+..+.... -|.....+
T Consensus 119 ---------------nLP~~-~k~~~P--------------~y~~~~~~~ip~~~~~g~~v~viaG~~~g~~~p~~~~~~ 168 (290)
T 1j1l_A 119 ---------------NLRSS-EKMVEP--------------QYQELKSEEIPKPSKDGVTVAVISGEALGIKSKVYTRTP 168 (290)
T ss_dssp ---------------ECCGG-GTTSCC--------------EEEEECGGGSCCCEETTEEEEEEESEETTEECCCCCSSC
T ss_pred ---------------cCChh-hcCCCC--------------cceecccccCCcEeECCEEEEEEcCCcccCCCceeccCC
Confidence 12211 011111 111 110 1122222233444443321 23333446
Q ss_pred eeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEE
Q 039441 358 AGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFI 437 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~v 437 (539)
+.+..+.|.+|+-+.....+.-.-++||++|.+.+ .... ....+.++.+++
T Consensus 169 ~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v---~g~~--------------------------~~~~~~~~~~~~ 219 (290)
T 1j1l_A 169 TLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYI---GPDD--------------------------AQQKIEPHHTAV 219 (290)
T ss_dssp EEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEE---SCTT--------------------------SCEEECTTEEEE
T ss_pred cEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEE---CCcc--------------------------cceeccCceEEE
Confidence 88888999999988655555567899999999876 2110 002366677777
Q ss_pred eCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 438 IPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 438 VPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
...|-...+.|..+++..+|.|.--+
T Consensus 220 l~~gd~~~i~~~a~~~a~~LLl~G~P 245 (290)
T 1j1l_A 220 LGEGDSVQVENKDPKRSHFVLIAGEP 245 (290)
T ss_dssp ECSCSEEEEECCSSSCEEEEEEEECC
T ss_pred ecCCCEEEEEEcCCCCcEEEEEEccc
Confidence 77777777776435567777665443
No 196
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=96.37 E-value=0.006 Score=59.62 Aligned_cols=51 Identities=10% Similarity=0.096 Sum_probs=44.8
Q ss_pred ecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEec
Q 039441 214 VVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQ 266 (539)
Q Consensus 214 ~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~ 266 (539)
+-+||+|.-+|+||++|+|. .++..+...+.|.+||++.||+|.+|.+...
T Consensus 22 ~~~~~~~~~~i~~v~~G~~~--~i~~~~~~~~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 22 FNNLYINDYKMFWIDSGIAK--LIDKNCLVSYEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEEECSSCEEEEESSSCEE--EEETTTTEEEEECTTEEEEECTTCEEEEEEE
T ss_pred ccHhhhcceEEEEEecCceE--EECCccceeEEEcCCCEEEEcCCCceeeccc
Confidence 35789999999999999999 6675555589999999999999999998876
No 197
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=96.34 E-value=0.012 Score=57.49 Aligned_cols=66 Identities=14% Similarity=0.144 Sum_probs=52.6
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
+..+.++.+.||+.+.+|.| ...+.+||++|... +.+ ..+.+||.+
T Consensus 42 g~~~~lvr~~pG~~~p~H~H-~g~Ee~~VL~G~f~----d~~-----------------------------~~~~~Gd~~ 87 (223)
T 3o14_A 42 ARATSIVRYAPGSRFSAHTH-DGGEEFIVLDGVFQ----DEH-----------------------------GDYPAGTYV 87 (223)
T ss_dssp CEEEEEEEECTTEECCCEEC-TTCEEEEEEEEEEE----ETT-----------------------------EEEETTEEE
T ss_pred ccEEEEEEECCCCCcccccC-CCCEEEEEEEeEEE----ECC-----------------------------eEECCCeEE
Confidence 34678999999999999999 57899999999964 221 358999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEE
Q 039441 437 IIPPGHPIALVASPNEKLLTVG 458 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~ 458 (539)
++|+|..|...+ ++++.++.
T Consensus 88 ~~P~g~~H~p~a--~~gc~~~v 107 (223)
T 3o14_A 88 RNPPTTSHVPGS--AEGCTIFV 107 (223)
T ss_dssp EECTTCEECCEE--SSCEEEEE
T ss_pred EeCCCCccccEe--CCCCEEEE
Confidence 999999998887 34454443
No 198
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.32 E-value=0.017 Score=59.59 Aligned_cols=96 Identities=16% Similarity=0.263 Sum_probs=58.0
Q ss_pred EEEcC-CceecceecCCCCEEEEEEeceEEEEEe-cCCCCc--cc--hhhhhhhhHHHHHHhhhcc------eeeEEeee
Q 039441 363 VEINQ-GGMMVPHYNSKATTIVLVVEGRGRFEMG-GPLSSR--WS--QESQREQQEEEEEEESSRE------LQKISANL 430 (539)
Q Consensus 363 v~L~p-Ggm~~PHwhpnA~ei~yV~~G~g~v~vV-~p~gs~--~s--~~~~~g~~~~~~~e~~~~~------y~~~~~~L 430 (539)
+-+.| |+.+.|||. ..+.++..+.|+=++.+. .|.... .. ..+...- .-.-....... -..+...|
T Consensus 145 ~~~gp~g~~~~~H~D-~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~L 222 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFD-AYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYY-PDDLQSYWKGDPPKEDLPDAEIVNL 222 (342)
T ss_dssp EEEECSSCCCCSEEC-SSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----C-CHHHHHHCCSCCCCTTCCSSEEEEE
T ss_pred EEEeCCCCCCCCeEC-ChhcEEEEEEEEEEEEEecCCccccccCcccccccccc-cccccccchhhccccccCCceEEEE
Confidence 44555 889999997 446888889999999999 665221 00 0000000 00000000000 12456789
Q ss_pred CCCcEEEeCCCCeEEEEcCCCCcEEEEEEe
Q 039441 431 SPGVVFIIPPGHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 431 ~~GDV~vVPaG~~h~i~n~gne~l~~v~F~ 460 (539)
.+|||++||+|+.|+..+.+++...-|+|.
T Consensus 223 ~pGD~LyiP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 223 TPGTMLYLPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp CTTCEEEECTTCEEEEECSSCEEEEEEEEC
T ss_pred CCCcEEEeCCCccEEEEECCCCceEEEEEC
Confidence 999999999999999999854444455554
No 199
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=96.31 E-value=0.021 Score=55.67 Aligned_cols=72 Identities=6% Similarity=0.074 Sum_probs=50.9
Q ss_pred eeEEEEEEcCCce--ecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 358 AGVTYVEINQGGM--MVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 358 isva~v~L~pGgm--~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
+-+....|....- +.+||| +..+|+||++|.|. .++..+ .....|.+||+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~G~~~--~i~~~~-------------------------~~~~~l~~g~l 58 (276)
T 3gbg_A 7 FQTNVYRMSKFDTYIFNNLYI-NDYKMFWIDSGIAK--LIDKNC-------------------------LVSYEINSSSI 58 (276)
T ss_dssp EEEEEEEECTTCEEEEEEEEC-SSCEEEEESSSCEE--EEETTT-------------------------TEEEEECTTEE
T ss_pred hhhhhhhhhcccchhccHhhh-cceEEEEEecCceE--EECCcc-------------------------ceeEEEcCCCE
Confidence 3344555555544 478998 99999999999999 444421 11367999999
Q ss_pred EEeCCCCeEEEEcC--CCCcEEEE
Q 039441 436 FIIPPGHPIALVAS--PNEKLLTV 457 (539)
Q Consensus 436 ~vVPaG~~h~i~n~--gne~l~~v 457 (539)
++||+|.+|.+... .+++...+
T Consensus 59 ~~i~p~~~h~~~~~~~~~~~~~~~ 82 (276)
T 3gbg_A 59 ILLKKNSIQRFSLTSLSDENINVS 82 (276)
T ss_dssp EEECTTCEEEEEEEECCSSCEEEE
T ss_pred EEEcCCCceeeccccCCCcceEEE
Confidence 99999999998765 33444433
No 200
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=96.30 E-value=0.072 Score=50.12 Aligned_cols=106 Identities=10% Similarity=0.102 Sum_probs=71.4
Q ss_pred eEecCCceEEEeeccCcccccccCcceeeEEEeeeCCCeeecccc-cCCCcEEEEEeceEEEEEEeCCCc-------eee
Q 039441 174 RVRSDSGHMRVLQRFSQKSHLLRGIDNYRLAILEANPSTLVVPHH-SDAETILVLLKGKGVITLVSHERR-------ESF 245 (539)
Q Consensus 174 ~v~se~G~i~vl~~f~~~s~~l~gv~~~Rl~il~l~P~~l~lPh~-~dA~~~~yV~~G~g~i~~v~pg~~-------~~~ 245 (539)
++..+-|.+.. .|..+...+. ...+.-+....|+.++=.|| ....++++|++|+..+.+++-... ..+
T Consensus 30 ~~~D~RG~f~e--~~~~~~~~~~--~f~Q~n~s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v 105 (174)
T 3ejk_A 30 QIPAEGGPVLH--MLRLDSPQFS--QFGEIYFSEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQV 105 (174)
T ss_dssp EECCTTSCEEC--CCCTTCTTCC--CCCEEEEEEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEE
T ss_pred cEecCCcCEEE--EEecCccCCC--CeeEEEEEECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEE
Confidence 44566677653 4444332221 22333444558999998885 468899999999999999885432 456
Q ss_pred ecC---CCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCC
Q 039441 246 NME---HGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTP 284 (539)
Q Consensus 246 ~v~---~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~p 284 (539)
.|. ..-.++||+|++|-++|..+ ++.+++.+.+....|
T Consensus 106 ~Ls~~~n~~~L~IP~G~aHgf~~lsd-~~av~ly~~s~~Y~p 146 (174)
T 3ejk_A 106 TLGRPDNYRLLRIPPQVWYGFAATGD-TPALVANCTDIPHRQ 146 (174)
T ss_dssp EEETTTBCEEEEECTTCEEEEEECTT-SCEEEEEEESSCCCT
T ss_pred EECCccCceEEEeCCCcEEEEEEccC-CCEEEEEECCCccCC
Confidence 666 56799999999999999974 356666666544333
No 201
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=96.30 E-value=0.05 Score=55.68 Aligned_cols=59 Identities=24% Similarity=0.313 Sum_probs=40.9
Q ss_pred eeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEE
Q 039441 358 AGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFI 437 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~v 437 (539)
+++.++.+..+. .. -...+..|+.|++|+|.+.. ++ . ...|++||.|+
T Consensus 251 F~~~~~~~~~~~-~~--~~~~~~~il~v~~G~~~l~~---~~------------------------~--~~~l~~G~~~~ 298 (319)
T 1qwr_A 251 FSVYKWDINGEA-EM--AQDESFLICSVIEGSGLLKY---ED------------------------K--TCPLKKGDHFI 298 (319)
T ss_dssp CEEEEEEEEEEE-EE--CCCSSCEEEEEEEEEEEEEE---TT------------------------E--EEEEETTCEEE
T ss_pred EEEEEEEECCce-EE--ccCCccEEEEEEcCeEEEEE---CC------------------------E--EEEEcCCcEEE
Confidence 566677776442 21 22367899999999998865 22 1 24799999999
Q ss_pred eCCCCeEEEEc
Q 039441 438 IPPGHPIALVA 448 (539)
Q Consensus 438 VPaG~~h~i~n 448 (539)
||++..-+.+.
T Consensus 299 vpa~~~~~~i~ 309 (319)
T 1qwr_A 299 LPAQMPDFTIK 309 (319)
T ss_dssp ECTTCCCEEEE
T ss_pred EeCCCceEEEE
Confidence 99987544443
No 202
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=96.30 E-value=0.0072 Score=55.87 Aligned_cols=76 Identities=7% Similarity=-0.062 Sum_probs=55.1
Q ss_pred cceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 356 IDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 356 l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
.+..+.++.+.||+.+.+|||| ..+.+|||+|..... .|. |. -+..+.+|+.
T Consensus 44 ~g~~t~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~----~Gd----------------------~~-~~~~~~aGsY 95 (153)
T 3bal_A 44 TSSWTAIFNCPAGSSFASHIHA-GPGEYFLTKGKMEVR----GGE----------------------QE-GGSTAYAPSY 95 (153)
T ss_dssp TTEEEEEEEECTTEEECCEEES-SCEEEEEEESEEEET----TCG----------------------GG-TSEEEESSEE
T ss_pred cceEEEEEEeCCCCCccCccCC-CCEEEEEEEEEEEec----Ccc----------------------cc-CccccCCCeE
Confidence 3578889999999999999995 668899999998662 220 00 1345789999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEe
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~ 460 (539)
++-|+|..|+.....+ +.+++.+.
T Consensus 96 v~ePpGs~H~p~~~~~-~~~~~~~~ 119 (153)
T 3bal_A 96 GFESSGALHGKTFFPV-ESQFYMTF 119 (153)
T ss_dssp EEECTTCEESCCEESS-CEEEEEEE
T ss_pred EEcCCCCcccceeCCC-CeEEEEEE
Confidence 9999999998654423 34444333
No 203
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=96.16 E-value=0.036 Score=56.27 Aligned_cols=57 Identities=18% Similarity=0.216 Sum_probs=39.4
Q ss_pred eeEEEEEEcCCceecceecCCCC-EEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 358 AGVTYVEINQGGMMVPHYNSKAT-TIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhpnA~-ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
+++.++.+.. .... -. .+. .|+.|++| |.+.. ++ .. ..|++|+++
T Consensus 230 F~v~~~~~~~-~~~~--~~-~~~~~il~v~~G-~~i~~---~~------------------------~~--~~l~~G~~~ 275 (300)
T 1zx5_A 230 FGLEVVDVTG-TAEI--KT-GGVMNILYAAEG-YFILR---GK------------------------ET--ADLHRGYSC 275 (300)
T ss_dssp EEEEEEEEEE-EEEE--EC-CSBCEEEEEEES-CEEEE---SS------------------------SE--EEECTTCEE
T ss_pred EEEEEEEECC-ceEE--ec-CCceEEEEEccc-EEEEe---CC------------------------eE--EEEccceEE
Confidence 5666777764 3222 23 667 89999999 88765 22 12 369999999
Q ss_pred EeCCCCeEEEEc
Q 039441 437 IIPPGHPIALVA 448 (539)
Q Consensus 437 vVPaG~~h~i~n 448 (539)
+||++..-+.+.
T Consensus 276 ~ipa~~~~~~i~ 287 (300)
T 1zx5_A 276 LVPASTDSFTVE 287 (300)
T ss_dssp EECTTCCEEEEE
T ss_pred EEeCCCceEEEE
Confidence 999998655554
No 204
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=96.12 E-value=0.041 Score=57.98 Aligned_cols=60 Identities=17% Similarity=0.221 Sum_probs=42.1
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
.+++.++.|.++.. ++..++..|+.|++|+|.+.. .+ .. ..|++||++
T Consensus 323 ~F~v~~~~l~~~~~---~~~~~~~~il~v~~G~~~l~~--~~-------------------------~~--~~l~~G~~~ 370 (394)
T 2wfp_A 323 DFAFSLHDLALQET---SIGQHSAAILFCVEGEAVLRK--DE-------------------------QR--LVLKPGESA 370 (394)
T ss_dssp SCEEEEEECCSSCE---EECCSSCEEEEEEEEEEEEEE--TT-------------------------EE--EEECTTCEE
T ss_pred EEEEEEEEEcCCeE---EecCCCcEEEEEEeceEEEEE--CC-------------------------eE--EEEccCcEE
Confidence 36777788876533 334467899999999998654 21 12 479999999
Q ss_pred EeCCCCeEEEEc
Q 039441 437 IIPPGHPIALVA 448 (539)
Q Consensus 437 vVPaG~~h~i~n 448 (539)
+||++..-+.+.
T Consensus 371 fvpa~~~~~~i~ 382 (394)
T 2wfp_A 371 FIGADESPVNAS 382 (394)
T ss_dssp EECGGGCCEEEE
T ss_pred EEeCCCceEEEE
Confidence 999986444443
No 205
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=95.92 E-value=0.035 Score=52.48 Aligned_cols=87 Identities=21% Similarity=0.189 Sum_probs=50.9
Q ss_pred EEEcC-CceecceecCCCCEEEEEEeceEEEEEecCCCCc-----cchhhhhhhh--HHH-HHHh--hhcceeeEEeeeC
Q 039441 363 VEINQ-GGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSR-----WSQESQREQQ--EEE-EEEE--SSRELQKISANLS 431 (539)
Q Consensus 363 v~L~p-Ggm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~-----~s~~~~~g~~--~~~-~~e~--~~~~y~~~~~~L~ 431 (539)
+-|.+ |+...+|+.+ .+.++.++.|+=++.++.|.... .......... -.. .-+. .-..-+.+...|+
T Consensus 128 ~wiG~~gs~t~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~ 206 (235)
T 4gjz_A 128 AWFGPQGTISPLHQDP-QQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILS 206 (235)
T ss_dssp EEEECTTCEEEEECCS-SEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEEC
T ss_pred EEEeCCCCCceeeecc-ccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEEC
Confidence 33444 4555567765 46788999999999999885321 0000000000 000 0000 0001134567899
Q ss_pred CCcEEEeCCCCeEEEEcCC
Q 039441 432 PGVVFIIPPGHPIALVASP 450 (539)
Q Consensus 432 ~GDV~vVPaG~~h~i~n~g 450 (539)
+||+++||+|+.|++.|.+
T Consensus 207 pGD~LyiP~gW~H~V~~l~ 225 (235)
T 4gjz_A 207 PGEILFIPVKYWHYVRALD 225 (235)
T ss_dssp TTCEEEECTTCEEEEEESS
T ss_pred CCCEEEeCCCCcEEEEECC
Confidence 9999999999999999984
No 206
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=95.91 E-value=0.047 Score=52.59 Aligned_cols=80 Identities=14% Similarity=0.129 Sum_probs=61.9
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEe--CCC-c----eeeecCCCcEEEeCC--CCeEEEEecCCCc
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVS--HER-R----ESFNMEHGDVISVPA--GTTYYLSNQDNVD 270 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~--pg~-~----~~~~v~~GDV~~iPa--G~~h~i~N~g~~e 270 (539)
.+-+.+|...|+...-+|-|....+++|++|....++-. +++ . ....+.+||+++|++ |.+|-+.|...++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~ 157 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDDR 157 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSS
T ss_pred CEEEEEEEeCCCcccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCCC
Confidence 345677788999999999555699999999999888754 222 1 367899999999999 9999999984456
Q ss_pred eEEEEEEec
Q 039441 271 RLHVAKLLQ 279 (539)
Q Consensus 271 ~L~iv~l~d 279 (539)
..+.|-++-
T Consensus 158 ~avsLHvY~ 166 (208)
T 2gm6_A 158 VSISIHVYG 166 (208)
T ss_dssp CEEEEEEES
T ss_pred cEEEEEEEc
Confidence 565555443
No 207
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=95.91 E-value=0.015 Score=54.98 Aligned_cols=60 Identities=25% Similarity=0.401 Sum_probs=46.0
Q ss_pred CCCeeecccccC-CCcEEEEEeceEEEEEEeCCCc-----------------------------------eeeecCCCcE
Q 039441 209 NPSTLVVPHHSD-AETILVLLKGKGVITLVSHERR-----------------------------------ESFNMEHGDV 252 (539)
Q Consensus 209 ~P~~l~lPh~~d-A~~~~yV~~G~g~i~~v~pg~~-----------------------------------~~~~v~~GDV 252 (539)
-|.+-..|.|.| .+-|+.++.|+=+..+..|... ....|++||+
T Consensus 131 G~~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~ 210 (235)
T 4gjz_A 131 GPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEI 210 (235)
T ss_dssp ECTTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTCE
T ss_pred eCCCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCCE
Confidence 555544554444 5778889999999999887531 1246899999
Q ss_pred EEeCCCCeEEEEecCC
Q 039441 253 ISVPAGTTYYLSNQDN 268 (539)
Q Consensus 253 ~~iPaG~~h~i~N~g~ 268 (539)
++||+|..|++.|.+.
T Consensus 211 LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 211 LFIPVKYWHYVRALDL 226 (235)
T ss_dssp EEECTTCEEEEEESSS
T ss_pred EEeCCCCcEEEEECCC
Confidence 9999999999999973
No 208
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=95.74 E-value=0.12 Score=49.44 Aligned_cols=87 Identities=8% Similarity=-0.007 Sum_probs=65.8
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecC-CCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGP-LSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p-~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
.+++..+...||.-..+|=|.++.-+++|++|....++..- .... ..--..-...|.+|||
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~------------------~~l~~~~~~~l~~G~v 130 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKS------------------NEMIKKSERTLRENQC 130 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSC------------------CCCCEEEEEEECTTCE
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCc------------------ccccccceEEeCCCCE
Confidence 37788899999999999999889999999999999998663 2110 0000123467999999
Q ss_pred EEe-CCCCeEEEEcCC-CCcEEEEEEee
Q 039441 436 FII-PPGHPIALVASP-NEKLLTVGFSL 461 (539)
Q Consensus 436 ~vV-PaG~~h~i~n~g-ne~l~~v~F~~ 461 (539)
.++ |.+..|.+.|.+ ++..+-|-+..
T Consensus 131 ~~~~~~~giH~V~N~s~~~~avSlHvY~ 158 (200)
T 3eln_A 131 AYINDSIGLHRVENVSHTEPAVSLHLYS 158 (200)
T ss_dssp EEECTTTCEEEEECCCSSCCEEEEEEEE
T ss_pred EEecCCCcEEEEECCCCCCCEEEEEeCC
Confidence 999 889999999987 56666554443
No 209
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=95.67 E-value=0.07 Score=51.15 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=60.0
Q ss_pred ceeeEEEeeeCCCeeeccc-ccCCCcEEEEEeceEEEEEEe-CCC-------ceeeecCCCcEEEe-CCCCeEEEEecCC
Q 039441 199 DNYRLAILEANPSTLVVPH-HSDAETILVLLKGKGVITLVS-HER-------RESFNMEHGDVISV-PAGTTYYLSNQDN 268 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh-~~dA~~~~yV~~G~g~i~~v~-pg~-------~~~~~v~~GDV~~i-PaG~~h~i~N~g~ 268 (539)
..+.|.+|...|+..--+| |.++-.+++|++|.-+.+... ++. .....+.+|||.+| |++-+|.+.|.+.
T Consensus 68 ~~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~ 147 (200)
T 3eln_A 68 GKFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSH 147 (200)
T ss_dssp GTCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCS
T ss_pred CceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCC
Confidence 3466778888999999999 777999999999999888755 222 12578999999999 8888999999874
Q ss_pred CceEE
Q 039441 269 VDRLH 273 (539)
Q Consensus 269 ~e~L~ 273 (539)
++..+
T Consensus 148 ~~~av 152 (200)
T 3eln_A 148 TEPAV 152 (200)
T ss_dssp SCCEE
T ss_pred CCCEE
Confidence 45544
No 210
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.52 E-value=0.087 Score=56.33 Aligned_cols=78 Identities=22% Similarity=0.279 Sum_probs=52.3
Q ss_pred EEEEcCCceec--ceecCCCCEEEEEEeceEEEEEecCCCCc--cchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEE
Q 039441 362 YVEINQGGMMV--PHYNSKATTIVLVVEGRGRFEMGGPLSSR--WSQESQREQQEEEEEEESSRELQKISANLSPGVVFI 437 (539)
Q Consensus 362 ~v~L~pGgm~~--PHwhpnA~ei~yV~~G~g~v~vV~p~gs~--~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~v 437 (539)
.+-+.|+|-.. |||. ..+.+++.+.|+=++.+..|..+- .++-. - +.... -..++..|.+|||++
T Consensus 142 n~y~~~~g~~g~~~H~D-~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d---~-----~~~~~--~~~~~~~L~pGD~LY 210 (442)
T 2xdv_A 142 NVYITPAGSQGLPPHYD-DVEVFILQLEGEKHWRLYHPTVPLAREYSVE---A-----EERIG--RPVHEFMLKPGDLLY 210 (442)
T ss_dssp EEEEECTTCBCSCSEEC-SSEEEEEEEESCEEEEEECCSSTTCSSCEEC---C-----TTTSC--SCSEEEEECTTCEEE
T ss_pred ceEECCCCCCCccceEC-CcceEEEEEEeEEEEEEccCCCCccccCCCC---c-----hhhcC--CcceEEEECCCcEEE
Confidence 34556666555 9996 567788889999999998886321 00000 0 00000 023567899999999
Q ss_pred eCCCCeEEEEcCC
Q 039441 438 IPPGHPIALVASP 450 (539)
Q Consensus 438 VPaG~~h~i~n~g 450 (539)
||+|++|+..+.+
T Consensus 211 iP~g~~H~~~s~~ 223 (442)
T 2xdv_A 211 FPRGTIHQADTPA 223 (442)
T ss_dssp ECTTCEEEEECCS
T ss_pred ECCCceEEEEecC
Confidence 9999999999874
No 211
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=95.49 E-value=0.13 Score=48.78 Aligned_cols=75 Identities=17% Similarity=0.133 Sum_probs=55.5
Q ss_pred cCCceecceec--CCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcce-eeEEeeeCC--CcEEEeCC
Q 039441 366 NQGGMMVPHYN--SKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSREL-QKISANLSP--GVVFIIPP 440 (539)
Q Consensus 366 ~pGgm~~PHwh--pnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y-~~~~~~L~~--GDV~vVPa 440 (539)
.+|.++..||| ..-.++++|++|+...-+|+-.-.+ +.| +.....|.+ +..++||+
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~S-------------------pTfg~~~~~~Ls~~n~~~L~IP~ 116 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNS-------------------DTYGEWTGVRLSDENRREFFIPE 116 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTC-------------------TTTTCEEEEEEETTTCCEEEECT
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCC-------------------CCCCeEEEEEecCCCCCEEEeCC
Confidence 48999999999 6678999999999988788764211 011 244556754 68999999
Q ss_pred CCeEEEEcCCCCcEEEEEEe
Q 039441 441 GHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 441 G~~h~i~n~gne~l~~v~F~ 460 (539)
|++|-+.+.++. ..++.+.
T Consensus 117 G~aHgf~~lsd~-a~~~y~~ 135 (185)
T 1ep0_A 117 GFAHGFLALSDE-CIVNYKC 135 (185)
T ss_dssp TEEEEEEECSSE-EEEEEEE
T ss_pred CeEEEEEEcCCC-eEEEEec
Confidence 999999998654 5555433
No 212
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=95.47 E-value=0.022 Score=52.57 Aligned_cols=64 Identities=13% Similarity=-0.030 Sum_probs=50.6
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCC-ceeeecCCCcEEEeCCCCeEEEEec
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHER-RESFNMEHGDVISVPAGTTYYLSNQ 266 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~-~~~~~v~~GDV~~iPaG~~h~i~N~ 266 (539)
..-..||++.|++.+-+|+|...+.+||++|.-... .|. +....+.+|+.++-|+|+.|+..-.
T Consensus 45 g~~t~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~---~Gd~~~~~~~~aGsYv~ePpGs~H~p~~~ 109 (153)
T 3bal_A 45 SSWTAIFNCPAGSSFASHIHAGPGEYFLTKGKMEVR---GGEQEGGSTAYAPSYGFESSGALHGKTFF 109 (153)
T ss_dssp TEEEEEEEECTTEEECCEEESSCEEEEEEESEEEET---TCGGGTSEEEESSEEEEECTTCEESCCEE
T ss_pred ceEEEEEEeCCCCCccCccCCCCEEEEEEEEEEEec---CccccCccccCCCeEEEcCCCCcccceeC
Confidence 345667788999999999999999999999987542 221 1245678999999999999986543
No 213
>2lqx_A Trypsin inhibitor BWI-2C; helical hairpin, hydrolase inhibitor; NMR {Fagopyrum esculentum}
Probab=94.34 E-value=0.0028 Score=44.07 Aligned_cols=32 Identities=25% Similarity=0.857 Sum_probs=27.7
Q ss_pred CChHHHHHHHHHHHHHH-------HHHHHHHHHHHHHhh
Q 039441 45 QDPEEEYKQCKQLCEKQ-------EAVQRRCERHYKEQQ 76 (539)
Q Consensus 45 ~dp~~~~~~c~~~c~~q-------~~c~~~ce~~~~~~~ 76 (539)
..|+++|+.|+.-|+-- +.|+..||+.+++++
T Consensus 2 ekpqqeleecqnvcrmkrwstemvhrcekkceekferqq 40 (41)
T 2lqx_A 2 EKPQQELEECQNVCRMKRWSTEMVHRCEKKCEEKFERQQ 40 (41)
Confidence 46999999999999866 489999999998765
No 214
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.32 E-value=0.09 Score=56.87 Aligned_cols=92 Identities=18% Similarity=0.285 Sum_probs=57.3
Q ss_pred EEEEcCCcee--cceecCCCCEEEEEEeceEEEEEecCCCCc----cchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 362 YVEINQGGMM--VPHYNSKATTIVLVVEGRGRFEMGGPLSSR----WSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 362 ~v~L~pGgm~--~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~----~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
.+-+.|+|-. .|||- .-+.+++-+.|+=+..|..|.... ..+.. .=. ..+.. -..+...|++|||
T Consensus 167 N~Y~tp~Gs~g~~pH~D-~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~-~~~-----~~~~~--~p~~e~~L~pGDv 237 (489)
T 4diq_A 167 NVYLTPPNSQGFAPHYD-DIEAFVLQLEGRKLWRVYRPRAPTEELALTSSP-NFS-----QDDLG--EPVLQTVLEPGDL 237 (489)
T ss_dssp EEEEECSSBCCSCCBCC-SSEEEEEEEEECEEEEEECCSSGGGTTCSSCCC-CCC-----GGGCC--CCSEEEEECTTCE
T ss_pred eEEecCCCcccccCccC-CcceEEEEEeeEEEEEEeCCCCccccCCCcccc-cCC-----ccccc--CcceEEEECCCCE
Confidence 4566677754 59997 446677777888899998876321 00000 000 00000 0235678999999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEeec
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSLN 462 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~n 462 (539)
++||+|++|+..+.++..-.-|.|.+.
T Consensus 238 LYiP~g~~H~~~s~~~~~SlhlTi~~~ 264 (489)
T 4diq_A 238 LYFPRGFIHQAECQDGVHSLHLTLSTY 264 (489)
T ss_dssp EEECTTCEEEEEBCSSCCEEEEEEEEC
T ss_pred EEECCCCceEEEecCCCceEEEeeccc
Confidence 999999999999986544444455544
No 215
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=95.30 E-value=0.15 Score=48.31 Aligned_cols=75 Identities=16% Similarity=0.067 Sum_probs=55.2
Q ss_pred cCCceecceec--CCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcce-eeEEeeeCC--CcEEEeCC
Q 039441 366 NQGGMMVPHYN--SKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSREL-QKISANLSP--GVVFIIPP 440 (539)
Q Consensus 366 ~pGgm~~PHwh--pnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y-~~~~~~L~~--GDV~vVPa 440 (539)
.+|.++..||| ..-+++++|++|+...-+|+-.-.+ +.| +.....|.+ +..++||.
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~S-------------------pTfg~~~~~~Ls~~n~~~L~IP~ 117 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGS-------------------PTFGQWVGERLSAENKRQMWIPA 117 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTS-------------------TTTTCEEEEEEETTTCCEEEECT
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCC-------------------CCCCeEEEEEeCCCcCCEEEeCC
Confidence 48999999999 6678999999999987777764211 111 244556654 68999999
Q ss_pred CCeEEEEcCCCCcEEEEEEe
Q 039441 441 GHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 441 G~~h~i~n~gne~l~~v~F~ 460 (539)
|++|-+.+.++. ..++.+.
T Consensus 118 G~aHgf~~lsd~-a~~~y~~ 136 (184)
T 2ixk_A 118 GFAHGFVVLSEY-AEFLYKT 136 (184)
T ss_dssp TEEEEEEECSSE-EEEEEEE
T ss_pred CeEEEEEEcCCC-EEEEEeC
Confidence 999999998654 5555433
No 216
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=95.16 E-value=0.25 Score=47.56 Aligned_cols=73 Identities=16% Similarity=0.100 Sum_probs=54.6
Q ss_pred cCCceecceecCC---CCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcce-eeEEeeeCC--CcEEEeC
Q 039441 366 NQGGMMVPHYNSK---ATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSREL-QKISANLSP--GVVFIIP 439 (539)
Q Consensus 366 ~pGgm~~PHwhpn---A~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y-~~~~~~L~~--GDV~vVP 439 (539)
.+|.++..|||.. -+++++|++|+...-+|+-.-.+ +.| +.....|.+ +..++||
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~S-------------------pTfG~~~~v~Ls~~n~~~L~IP 115 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGS-------------------PTFGQWDSVLMDQQDPRAVYLP 115 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTC-------------------TTTTCEEEEEECSSSCCEEEEC
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCC-------------------CCCCeEEEEEecCCCCCEEEeC
Confidence 5899999999954 58999999999988888874211 011 245567765 5899999
Q ss_pred CCCeEEEEcCCCCcEEEEE
Q 039441 440 PGHPIALVASPNEKLLTVG 458 (539)
Q Consensus 440 aG~~h~i~n~gne~l~~v~ 458 (539)
.|++|-+.+.++. .+++.
T Consensus 116 ~G~aHgf~~lsd~-a~~~y 133 (205)
T 1oi6_A 116 VGVGHAFVALEDD-TVMSY 133 (205)
T ss_dssp TTCEEEEEECSTT-EEEEE
T ss_pred CCeeEEEEEccCC-eEEEE
Confidence 9999999998665 44443
No 217
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=95.08 E-value=0.055 Score=55.86 Aligned_cols=97 Identities=19% Similarity=0.224 Sum_probs=58.7
Q ss_pred EEEc-CCceecceecCCCCEEEEEEeceEEEEEecCCCCc--cch--hh-hhhhhH---HHHHHhhhc---ceeeEEeee
Q 039441 363 VEIN-QGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSR--WSQ--ES-QREQQE---EEEEEESSR---ELQKISANL 430 (539)
Q Consensus 363 v~L~-pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~--~s~--~~-~~g~~~---~~~~e~~~~---~y~~~~~~L 430 (539)
+-|. +|+...+|+.+. +.|..++.|+=++.++.|.... ... .. ..+... ....-+.-+ .-..+...|
T Consensus 187 l~iG~~gs~t~~H~D~~-~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCSE-EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECCh-hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 4454 667888999866 7899999999999999886311 000 00 000000 000000000 013567889
Q ss_pred CCCcEEEeCCCCeEEEEcCCCCc-EEEEEEe
Q 039441 431 SPGVVFIIPPGHPIALVASPNEK-LLTVGFS 460 (539)
Q Consensus 431 ~~GDV~vVPaG~~h~i~n~gne~-l~~v~F~ 460 (539)
++||+++||+|+.|++.|.++.. -..|.|.
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w 296 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNFW 296 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEEE
Confidence 99999999999999999986433 3334443
No 218
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=95.08 E-value=0.17 Score=48.51 Aligned_cols=73 Identities=7% Similarity=-0.036 Sum_probs=56.3
Q ss_pred cCCceecceecCCCCEEEEEEe-ceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeE
Q 039441 366 NQGGMMVPHYNSKATTIVLVVE-GRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPI 444 (539)
Q Consensus 366 ~pGgm~~PHwhpnA~ei~yV~~-G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h 444 (539)
.+|.++..|+| .-.++++|++ |+...-+|+-. .+..- | +.....|..+..++||.|++|
T Consensus 68 ~~GvlRGlH~h-~q~Klv~~~~~G~v~dV~VDlR-~SpTf----g--------------~~~~v~Ls~~~~L~IP~G~aH 127 (197)
T 1nxm_A 68 RKNVLRGLHAE-PWDKYISVADGGKVLGTWVDLR-EGETF----G--------------NTYQTVIDASKSIFVPRGVAN 127 (197)
T ss_dssp ETTBEEEEEEC-SSCEEEEECSSCCEEEEEEECB-SSTTT----T--------------CEEEEEECTTEEEEECTTEEE
T ss_pred CCCCcceeeec-ccceEEEEcCCCEEEEEEEECC-CCCCC----C--------------eEEEEEeCCCcEEEeCCCeEE
Confidence 68999999999 5679999999 99988888876 22000 0 245667888999999999999
Q ss_pred EEEcCCCCcEEEEEE
Q 039441 445 ALVASPNEKLLTVGF 459 (539)
Q Consensus 445 ~i~n~gne~l~~v~F 459 (539)
-..+.++. .+++..
T Consensus 128 gf~~lsd~-a~~~y~ 141 (197)
T 1nxm_A 128 GFQVLSDF-VAYSYL 141 (197)
T ss_dssp EEEECSSE-EEEEEE
T ss_pred EEEeccCC-eEEEEE
Confidence 99998553 555543
No 219
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=95.06 E-value=3.3 Score=41.69 Aligned_cols=167 Identities=14% Similarity=0.172 Sum_probs=87.8
Q ss_pred cCCCcEEE-EEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecC-CCceEEEEEEeccCCCCCCceeccccCcc
Q 039441 219 SDAETILV-LLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQD-NVDRLHVAKLLQPVNTPGQFRVQQRQQGT 296 (539)
Q Consensus 219 ~dA~~~~y-V~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g-~~e~L~iv~l~d~~n~pg~f~~~~q~~G~ 296 (539)
+...|++. .+.|.|.|++ .| .+|+|..-|.++||.|+..++.... ...+++|+..--+... .--
T Consensus 76 l~~rE~~iV~l~G~~~V~v--dG--~~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav~sAPa~~----------~~P 141 (282)
T 1xru_A 76 LERRELGVINIGGAGTITV--DG--QCYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYNCAPAHT----------TYP 141 (282)
T ss_dssp TTTEEEEEEECSSCEEEEE--TT--EEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEEECSS----------CCC
T ss_pred cCCcEEEEEEccCeEEEEE--CC--EEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEccccCC----------CCC
Confidence 44445554 5678888887 22 5789999999999999976666533 2234544443333221 000
Q ss_pred EEEcChhhhhhcCccccccCCCCCCCCcceecCCCCCcccCCCceEEE-eCCcccccccccceeEEEEEEcCCce---ec
Q 039441 297 IKRASQEQLKALSHHASSRRRHGRGSTAPFNLLSRKPIYNNNFGRFFE-ATPKDYQQLQEIDAGVTYVEINQGGM---MV 372 (539)
Q Consensus 297 Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fnl~~~~p~~sn~~G~i~~-~~~~~fP~L~~l~isva~v~L~pGgm---~~ 372 (539)
..+++.+++..... +.. .. ++.-.|.- +.+..+ ....+-+..-.|+|||. ++
T Consensus 142 ~r~I~~~dv~~~~r-------G~~-------------~~-sn~R~I~~il~~~~~---~~~qllmg~evltpgg~WSSyP 197 (282)
T 1xru_A 142 TKKVTPDEVSPVTL-------GDN-------------LT-SNRRTINKYFVPDVL---ETCQLSMGLTELAPGNLWNTMP 197 (282)
T ss_dssp CEEECHHHHCCEEE-------CCG-------------GG-TCCEEEEEEESTTTC---CCSSCEEEEEEECTTCCEESCS
T ss_pred CEEECHHHCCeeec-------cCC-------------CC-CCcEEEEEeeCCCCC---chhhEEEEEEEEeCCCCcCCCC
Confidence 11222222211110 110 00 00111221 121222 33357788888999984 69
Q ss_pred ceecCCCCEEEEEEe--c-eEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEE
Q 039441 373 PHYNSKATTIVLVVE--G-RGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIALV 447 (539)
Q Consensus 373 PHwhpnA~ei~yV~~--G-~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~ 447 (539)
||-|=+-.|..|..+ . ...++++.... ....-.|+-||+++||..|+|.-.
T Consensus 198 pHkHDrr~EeyyYF~l~~~gfv~q~~g~p~------------------------Etrhi~V~n~daVlvP~wh~h~~~ 251 (282)
T 1xru_A 198 CHTHERRMEVYFYFNMDDDACVFHMMGQPQ------------------------ETRHIVMHNEQAVISPSWSIHSGV 251 (282)
T ss_dssp EEECTTEEEEEEEESCCTTCCEEEEEEETT------------------------EEEEEEECSSEEEEECTTCEEEEE
T ss_pred CccCCCCceEEEEEEeCCCCEEEEEeCCCC------------------------CeeEEEEECCCEEEeCCCCCCCCC
Confidence 999965666666665 1 12333332210 122236899999999966777744
No 220
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=95.04 E-value=0.2 Score=47.97 Aligned_cols=74 Identities=20% Similarity=0.241 Sum_probs=54.7
Q ss_pred cCCceecceecCC---CCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcce-eeEEeeeCC--CcEEEeC
Q 039441 366 NQGGMMVPHYNSK---ATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSREL-QKISANLSP--GVVFIIP 439 (539)
Q Consensus 366 ~pGgm~~PHwhpn---A~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y-~~~~~~L~~--GDV~vVP 439 (539)
.+|.++..|||.. -.++++|++|+...-+|+-.-.+ +.| +.....|.+ +..++||
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~S-------------------pTfG~~~~v~Ls~en~~~L~IP 133 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSS-------------------PTFGKYVKAELNEENHYMLWIP 133 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTS-------------------TTTTCEEEEEEETTTCCEEEEC
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCC-------------------CCCCeEEEEEecCCCCCEEEeC
Confidence 5899999999954 58999999999988788764211 011 245566764 7999999
Q ss_pred CCCeEEEEcCCCCcEEEEEE
Q 039441 440 PGHPIALVASPNEKLLTVGF 459 (539)
Q Consensus 440 aG~~h~i~n~gne~l~~v~F 459 (539)
.|++|-+.+.++ +..++.+
T Consensus 134 ~G~aHgf~~lsd-~a~~ly~ 152 (196)
T 1wlt_A 134 PGFAHGFQALED-SIVIYFI 152 (196)
T ss_dssp TTEEEEEEESSS-EEEEEEE
T ss_pred CCeEEEEEEcCC-CeEEEEE
Confidence 999999999865 4444443
No 221
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.03 E-value=0.11 Score=53.19 Aligned_cols=87 Identities=16% Similarity=0.295 Sum_probs=52.5
Q ss_pred EEEEc-CCceecceecCCCCEEEEEEeceEEEEEecCCCCcc----chhhhhhhhHHHHHHhhhc---ceeeEEeeeCCC
Q 039441 362 YVEIN-QGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRW----SQESQREQQEEEEEEESSR---ELQKISANLSPG 433 (539)
Q Consensus 362 ~v~L~-pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~----s~~~~~g~~~~~~~e~~~~---~y~~~~~~L~~G 433 (539)
.+-|. +|+-..+||.+. +.+..++.|+=++.++.|..... ...+.. -.-....-+.-+ ....+...|++|
T Consensus 170 ~l~~g~~g~~~~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~-~d~~~~d~~~~p~~~~~~~~~~~L~pG 247 (338)
T 3al5_A 170 VFRISSPGLQLWTHYDVM-DNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEV-LNIDNPDLAKYPLFSKARRYECSLEAG 247 (338)
T ss_dssp EEEEECTTCEEEEECCSS-EEEEEECSSCEEEEEECGGGGGGGTEETTEESC-CCSSSCCTTTCTTGGGCCEEEEEECTT
T ss_pred eeEECCCCCCccceECCc-ccEEEEEEEEEEEEEECcccccccccCCCCccc-ccCCCcchhhCcccccCCCEEEEECCC
Confidence 34444 455667799754 67888999999999998853210 000000 000000000000 113567889999
Q ss_pred cEEEeCCCCeEEEEcCC
Q 039441 434 VVFIIPPGHPIALVASP 450 (539)
Q Consensus 434 DV~vVPaG~~h~i~n~g 450 (539)
|+++||+|+.|++.|.+
T Consensus 248 D~LyiP~gWwH~v~~l~ 264 (338)
T 3al5_A 248 DVLFIPALWFHNVISEE 264 (338)
T ss_dssp CEEEECTTCEEEEEESS
T ss_pred CEEEECCCCeEEEeeCC
Confidence 99999999999999984
No 222
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=94.91 E-value=0.15 Score=49.17 Aligned_cols=73 Identities=14% Similarity=0.125 Sum_probs=54.9
Q ss_pred cCCceecceecC---CCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcce-eeEEeeeCC--CcEEEeC
Q 039441 366 NQGGMMVPHYNS---KATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSREL-QKISANLSP--GVVFIIP 439 (539)
Q Consensus 366 ~pGgm~~PHwhp---nA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y-~~~~~~L~~--GDV~vVP 439 (539)
.+|.++..|||. .-.++++|++|++..-+|+-.-.+ +.| +.....|.+ +..++||
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~S-------------------pTfg~~~~~~Ls~~n~~~L~IP 138 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDS-------------------PTFKQWRGYILSADNHRQLLVP 138 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTS-------------------TTTTCEEEEEEETTTCCEEEEC
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCC-------------------CCCCeEEEEEecCCCCCEEEeC
Confidence 689999999994 268999999999988888864211 111 345566764 8999999
Q ss_pred CCCeEEEEcCCCCcEEEEE
Q 039441 440 PGHPIALVASPNEKLLTVG 458 (539)
Q Consensus 440 aG~~h~i~n~gne~l~~v~ 458 (539)
.|++|-+.+.++. ..++.
T Consensus 139 ~G~aHGF~~Lsd~-a~~~Y 156 (205)
T 3ryk_A 139 KGFAHGFCTLVPH-TIVMY 156 (205)
T ss_dssp TTEEEEEEECSSS-EEEEE
T ss_pred CCceEEEEEcCCC-EEEEE
Confidence 9999999998654 44443
No 223
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=94.91 E-value=0.25 Score=46.76 Aligned_cols=73 Identities=15% Similarity=0.060 Sum_probs=53.9
Q ss_pred cCCceecceecC---CCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcce-eeEEeeeCC--CcEEEeC
Q 039441 366 NQGGMMVPHYNS---KATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSREL-QKISANLSP--GVVFIIP 439 (539)
Q Consensus 366 ~pGgm~~PHwhp---nA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y-~~~~~~L~~--GDV~vVP 439 (539)
.+|.++..|||. .-.++++|++|+...-+|+-.-.+ +.| +.....|.+ +..++||
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~S-------------------pTfg~~~~~~Ls~~n~~~L~IP 115 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKES-------------------PTFGQWVGVNLSAENKRQLWIP 115 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTC-------------------TTTTCEEEEEEETTTCCEEEEC
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCC-------------------CCCCeEEEEEecCCCCCEEEeC
Confidence 489999999995 568999999999988788764211 111 244556654 6899999
Q ss_pred CCCeEEEEcCCCCcEEEEE
Q 039441 440 PGHPIALVASPNEKLLTVG 458 (539)
Q Consensus 440 aG~~h~i~n~gne~l~~v~ 458 (539)
.|++|-+.+.++. ..++.
T Consensus 116 ~G~aHgf~~lsd~-a~~~y 133 (183)
T 1dzr_A 116 EGFAHGFVTLSEY-AEFLY 133 (183)
T ss_dssp TTEEEEEEECSSE-EEEEE
T ss_pred CCeEEEEEEcCCC-eEEEE
Confidence 9999999998654 44443
No 224
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=94.67 E-value=0.088 Score=54.29 Aligned_cols=64 Identities=17% Similarity=0.243 Sum_probs=47.8
Q ss_pred EEeeeCC-CeeecccccCCCcEEEEEeceEEEEEE-eCCC----------------------------------ceeeec
Q 039441 204 AILEANP-STLVVPHHSDAETILVLLKGKGVITLV-SHER----------------------------------RESFNM 247 (539)
Q Consensus 204 ~il~l~P-~~l~lPh~~dA~~~~yV~~G~g~i~~v-~pg~----------------------------------~~~~~v 247 (539)
.++-+-| ++.+-|||-..+-++..+.|+=++.+. .|.. .....|
T Consensus 143 ~~~~~gp~g~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L 222 (342)
T 1vrb_A 143 AIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNL 222 (342)
T ss_dssp EEEEEECSSCCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEE
T ss_pred ceEEEeCCCCCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEE
Confidence 3345566 666667776666677778899888888 5441 023578
Q ss_pred CCCcEEEeCCCCeEEEEecC
Q 039441 248 EHGDVISVPAGTTYYLSNQD 267 (539)
Q Consensus 248 ~~GDV~~iPaG~~h~i~N~g 267 (539)
++|||++||+|..|+..+.+
T Consensus 223 ~pGD~LyiP~gwwH~v~s~~ 242 (342)
T 1vrb_A 223 TPGTMLYLPRGLWHSTKSDQ 242 (342)
T ss_dssp CTTCEEEECTTCEEEEECSS
T ss_pred CCCcEEEeCCCccEEEEECC
Confidence 99999999999999999985
No 225
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=94.54 E-value=0.41 Score=46.73 Aligned_cols=73 Identities=12% Similarity=0.023 Sum_probs=53.8
Q ss_pred cCCceecceecCC---CCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcce-eeEEeeeCC--CcEEEeC
Q 039441 366 NQGGMMVPHYNSK---ATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSREL-QKISANLSP--GVVFIIP 439 (539)
Q Consensus 366 ~pGgm~~PHwhpn---A~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y-~~~~~~L~~--GDV~vVP 439 (539)
.+|.++..|||.. -+++++|++|+...-+|+-.-.+ +.| +.....|.+ +..++||
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~S-------------------pTfG~~~~v~Ls~~n~~~L~IP 134 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGS-------------------PTFGRWDSVLLDDQDRRTIYVS 134 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTC-------------------TTTTCEEEEEEETTTCCEEEEC
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCC-------------------CCCCcEEEEEecCCCCcEEEeC
Confidence 5899999999954 48999999999988888764211 111 245556755 5899999
Q ss_pred CCCeEEEEcCCCCcEEEEE
Q 039441 440 PGHPIALVASPNEKLLTVG 458 (539)
Q Consensus 440 aG~~h~i~n~gne~l~~v~ 458 (539)
.|++|-+.+.++. .+++.
T Consensus 135 ~G~aHgF~~Lsd~-a~vly 152 (225)
T 1upi_A 135 EGLAHGFLALQDN-STVMY 152 (225)
T ss_dssp TTCEEEEEECSSS-EEEEE
T ss_pred CCeeEEEEEcCCC-EEEEE
Confidence 9999999998665 44443
No 226
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=94.44 E-value=0.32 Score=47.21 Aligned_cols=74 Identities=12% Similarity=-0.051 Sum_probs=53.7
Q ss_pred cCCceecceecCC---CCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCC--CcEEEeCC
Q 039441 366 NQGGMMVPHYNSK---ATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSP--GVVFIIPP 440 (539)
Q Consensus 366 ~pGgm~~PHwhpn---A~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~--GDV~vVPa 440 (539)
.+|.++..|||.. -+++++|++|+...-+|+-.-.+..- | +.....|.+ +..++||.
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTf----G--------------~~~~v~Ls~~n~~~L~IP~ 124 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTY----G--------------CWEGTRLDDVSRRAVYLSE 124 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTT----T--------------CEEEEEEETTTCCEEEECT
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCC----C--------------eEEEEEecCCCCCEEEeCC
Confidence 4899999999954 58999999999987778764211000 0 245556765 58999999
Q ss_pred CCeEEEEcCCCCcEEEEE
Q 039441 441 GHPIALVASPNEKLLTVG 458 (539)
Q Consensus 441 G~~h~i~n~gne~l~~v~ 458 (539)
|++|-+.+.++. .+++.
T Consensus 125 G~aHgF~~Lsd~-a~~ly 141 (216)
T 2c0z_A 125 GIGHGFCAISDE-ATLCY 141 (216)
T ss_dssp TEEEEEEECSSE-EEEEE
T ss_pred CeeEEEEEcCCC-eEEEE
Confidence 999999998664 44443
No 227
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=94.29 E-value=0.19 Score=51.75 Aligned_cols=83 Identities=17% Similarity=0.198 Sum_probs=54.2
Q ss_pred CCceecceecCCCC-EEEEEEeceEEEEEecCCCCc-----cchhhhhhhhHHHHHH-------hhh-----cceeeEEe
Q 039441 367 QGGMMVPHYNSKAT-TIVLVVEGRGRFEMGGPLSSR-----WSQESQREQQEEEEEE-------ESS-----RELQKISA 428 (539)
Q Consensus 367 pGgm~~PHwhpnA~-ei~yV~~G~g~v~vV~p~gs~-----~s~~~~~g~~~~~~~e-------~~~-----~~y~~~~~ 428 (539)
+|+....|+.+..+ .|..++.|+=++.++.|.-+. ....++ ......-+ ... ...+.+..
T Consensus 181 ~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~--~~~~~~~~w~~~~~P~~~~~~~p~~~~~~~~ 258 (336)
T 3k2o_A 181 PRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGG--NQQDEAITWFNVIYPRTQLPTWPPEFKPLEI 258 (336)
T ss_dssp TTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHG--GGTTCHHHHHHHTGGGGGSTTSCGGGCCEEE
T ss_pred CCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccC--CCccchhhhhhhhCcchhhhcccccCceEEE
Confidence 46777889988754 799999999999999997532 000000 00000000 000 01234567
Q ss_pred eeCCCcEEEeCCCCeEEEEcCCC
Q 039441 429 NLSPGVVFIIPPGHPIALVASPN 451 (539)
Q Consensus 429 ~L~~GDV~vVPaG~~h~i~n~gn 451 (539)
.|++||+++||+|+.|++.|.++
T Consensus 259 ~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 259 LQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp EECTTCEEEECTTCEEEEEESSC
T ss_pred EECCCCEEEeCCCCcEEEecCCC
Confidence 89999999999999999999854
No 228
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=94.20 E-value=0.58 Score=44.97 Aligned_cols=74 Identities=11% Similarity=0.104 Sum_probs=55.2
Q ss_pred cCCceecceecC---CCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcce-eeEEeeeCC--CcEEEeC
Q 039441 366 NQGGMMVPHYNS---KATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSREL-QKISANLSP--GVVFIIP 439 (539)
Q Consensus 366 ~pGgm~~PHwhp---nA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y-~~~~~~L~~--GDV~vVP 439 (539)
.+|.++..||+. .-+++++|++|+...-+|+-.-.+ +.| +.+...|.+ +..++||
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~S-------------------pTfG~w~~v~Ls~en~~~l~IP 112 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGS-------------------PTFGRWEIVPMDAERNTAVYLT 112 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTC-------------------TTTTCEEEEEEETTTCCEEEEC
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCC-------------------CCCCeEEEEEecCCCCCEEEeC
Confidence 689999999994 468999999999988888874321 111 234456654 8899999
Q ss_pred CCCeEEEEcCCCCcEEEEEE
Q 039441 440 PGHPIALVASPNEKLLTVGF 459 (539)
Q Consensus 440 aG~~h~i~n~gne~l~~v~F 459 (539)
.|++|-..+.++. ..++-.
T Consensus 113 ~GfaHGF~~Lsd~-a~~~Y~ 131 (201)
T 4hn1_A 113 AGLGRAFLSLTDD-ATLVFL 131 (201)
T ss_dssp TTCEEEEEECSTT-EEEEEE
T ss_pred CcceEEEeecCCC-eEEEEe
Confidence 9999999998654 555443
No 229
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=94.02 E-value=1.8 Score=43.63 Aligned_cols=60 Identities=15% Similarity=0.074 Sum_probs=39.3
Q ss_pred cccccCCCcEEE-EEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCC-CceEEEEEEe
Q 039441 215 VPHHSDAETILV-LLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDN-VDRLHVAKLL 278 (539)
Q Consensus 215 lPh~~dA~~~~y-V~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~-~e~L~iv~l~ 278 (539)
.+..+..-|++. .+.|.|.|++ .| .+|+|..-|.++||.|+..++....+ ..+++|+..-
T Consensus 72 ~~~fl~~rE~~iV~lgG~~~V~v--dg--~~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav~s 133 (289)
T 1ywk_A 72 VDYFLERRELGVINIGGPGFIEI--DG--AKETMKKQDGYYIGKETKHVRFSSENPDNPAKFYISC 133 (289)
T ss_dssp SSSTTTTEEEEEEECSSCEEEEE--TT--EEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEE
T ss_pred ccccCCCcEEEEEEccCeEEEEE--CC--EEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEc
Confidence 344455566665 4677888877 22 57899999999999998866665422 2345444433
No 230
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=93.72 E-value=0.11 Score=44.09 Aligned_cols=35 Identities=17% Similarity=0.312 Sum_probs=29.7
Q ss_pred eeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccC
Q 039441 244 SFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPV 281 (539)
Q Consensus 244 ~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~ 281 (539)
...|++|||+.||+|.++.+.+.. .|.+|++-.+.
T Consensus 7 ~~~l~~G~v~vVPq~~~v~~~A~~---~le~v~F~tna 41 (93)
T 1dgw_Y 7 AATLSEGDIIVIPSSFPVALKAAS---DLNMVGIGVNA 41 (93)
T ss_dssp EEEECTTCEEEECTTCCEEEEESS---SEEEEEEEESC
T ss_pred hceecCCcEEEECCCCceeEEecC---CeEEEEEEecC
Confidence 568999999999999999999984 39988875544
No 231
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=93.58 E-value=0.19 Score=51.80 Aligned_cols=59 Identities=14% Similarity=0.117 Sum_probs=45.4
Q ss_pred CCCeeecccccCCCcEEEEEeceEEEEEEeCCCc------------------------------------eeeecCCCcE
Q 039441 209 NPSTLVVPHHSDAETILVLLKGKGVITLVSHERR------------------------------------ESFNMEHGDV 252 (539)
Q Consensus 209 ~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~------------------------------------~~~~v~~GDV 252 (539)
.+++..-+||-..+-|..++.|+=++.+..|... ....|++||+
T Consensus 191 ~~gs~t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~ 270 (349)
T 3d8c_A 191 MEGNVTPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDV 270 (349)
T ss_dssp CTTCEEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEECTTCE
T ss_pred CCCCCccceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEECCCCE
Confidence 3455655555445678888999999998876521 2357899999
Q ss_pred EEeCCCCeEEEEecC
Q 039441 253 ISVPAGTTYYLSNQD 267 (539)
Q Consensus 253 ~~iPaG~~h~i~N~g 267 (539)
++||+|..|++.|.+
T Consensus 271 LyiP~gWwH~V~~l~ 285 (349)
T 3d8c_A 271 LYIPMYWWHHIESLL 285 (349)
T ss_dssp EEECTTCEEEEEECT
T ss_pred EEECCCCcEEEEEcC
Confidence 999999999999997
No 232
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=93.27 E-value=0.33 Score=52.06 Aligned_cols=89 Identities=17% Similarity=0.152 Sum_probs=54.2
Q ss_pred cCCceecceecCCC-CEEEEEEeceEEEEEecCCCCccc-hhh--hhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCC
Q 039441 366 NQGGMMVPHYNSKA-TTIVLVVEGRGRFEMGGPLSSRWS-QES--QREQQEEEEEEESSRELQKISANLSPGVVFIIPPG 441 (539)
Q Consensus 366 ~pGgm~~PHwhpnA-~ei~yV~~G~g~v~vV~p~gs~~s-~~~--~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG 441 (539)
.+|+....|+.+.+ +.|..|+.|+=+.-++.|+-.... ... .-+.+...--..... +.+...|.+||+++||.|
T Consensus 204 p~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~--~~~~v~l~pGE~LfIPsG 281 (451)
T 2yu1_A 204 VRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVS--DCQRIELKQGYTFVIPSG 281 (451)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSS--CCEEEEECTTCEEEECTT
T ss_pred cCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccc--cceEEEECCCcEEEeCCC
Confidence 46677777888874 568899999999999999732100 000 000000000000001 234567999999999999
Q ss_pred CeEEEEcCCCCcEEEE
Q 039441 442 HPIALVASPNEKLLTV 457 (539)
Q Consensus 442 ~~h~i~n~gne~l~~v 457 (539)
|.|++.|..+ .+.+-
T Consensus 282 WwH~V~nled-sIait 296 (451)
T 2yu1_A 282 WIHAVYTPTD-TLVFG 296 (451)
T ss_dssp CEEEEECSSC-EEEEE
T ss_pred ceEEEecCCC-eEEEe
Confidence 9999999843 34443
No 233
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=93.23 E-value=0.65 Score=44.45 Aligned_cols=80 Identities=14% Similarity=0.070 Sum_probs=62.6
Q ss_pred eeEEEeeeCCCeeecccccCCCcEEEEEe-ceEEEEEEeCC------CceeeecCCCcEEEeCCCCeEEEEecCCCceEE
Q 039441 201 YRLAILEANPSTLVVPHHSDAETILVLLK-GKGVITLVSHE------RRESFNMEHGDVISVPAGTTYYLSNQDNVDRLH 273 (539)
Q Consensus 201 ~Rl~il~l~P~~l~lPh~~dA~~~~yV~~-G~g~i~~v~pg------~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~ 273 (539)
.+.-.....++.++=.|++...++++|+. |+....+|+-. ....+.|..+-.++||+|++|=+++..+ ...
T Consensus 60 ~Q~n~S~s~~GvlRGlH~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd--~a~ 137 (197)
T 1nxm_A 60 LQNNVSFSRKNVLRGLHAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSD--FVA 137 (197)
T ss_dssp CEEEEEEEETTBEEEEEECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSS--EEE
T ss_pred EEEEEEECCCCCcceeeecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccC--CeE
Confidence 45555555789999999888999999999 99988888875 3356778789999999999999999974 355
Q ss_pred EEEEeccCC
Q 039441 274 VAKLLQPVN 282 (539)
Q Consensus 274 iv~l~d~~n 282 (539)
++.+.+...
T Consensus 138 ~~y~~s~~Y 146 (197)
T 1nxm_A 138 YSYLVNDYW 146 (197)
T ss_dssp EEEEESSCC
T ss_pred EEEECCCcc
Confidence 555555433
No 234
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=93.14 E-value=0.71 Score=44.12 Aligned_cols=79 Identities=9% Similarity=0.085 Sum_probs=59.3
Q ss_pred eeeEEEeeeCCCeeecccccC----CCcEEEEEeceEEEEEEeCCC-------ceeeecC--CCcEEEeCCCCeEEEEec
Q 039441 200 NYRLAILEANPSTLVVPHHSD----AETILVLLKGKGVITLVSHER-------RESFNME--HGDVISVPAGTTYYLSNQ 266 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~d----A~~~~yV~~G~g~i~~v~pg~-------~~~~~v~--~GDV~~iPaG~~h~i~N~ 266 (539)
..+.-+....++.++=.||+. ..++++|++|+....+|+-.. ...+.|. .+-.++||+|++|-++|.
T Consensus 64 f~Q~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~l 143 (196)
T 1wlt_A 64 VIQTNMSFSRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQAL 143 (196)
T ss_dssp EEEEEEEEECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEES
T ss_pred EEEEEEEECCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEc
Confidence 345555556799999999876 489999999999888888643 2456665 478999999999999999
Q ss_pred CCCceEEEEEEecc
Q 039441 267 DNVDRLHVAKLLQP 280 (539)
Q Consensus 267 g~~e~L~iv~l~d~ 280 (539)
.+ ...++.+.+.
T Consensus 144 sd--~a~~ly~~s~ 155 (196)
T 1wlt_A 144 ED--SIVIYFITHN 155 (196)
T ss_dssp SS--EEEEEEEESS
T ss_pred CC--CeEEEEEeCC
Confidence 74 3444554443
No 235
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=92.96 E-value=0.31 Score=52.71 Aligned_cols=70 Identities=24% Similarity=0.352 Sum_probs=46.3
Q ss_pred CCCeeec-ccccCCCcEEEEEeceEEEEEEeCCCc---------------------eeeecCCCcEEEeCCCCeEEEEec
Q 039441 209 NPSTLVV-PHHSDAETILVLLKGKGVITLVSHERR---------------------ESFNMEHGDVISVPAGTTYYLSNQ 266 (539)
Q Consensus 209 ~P~~l~l-Ph~~dA~~~~yV~~G~g~i~~v~pg~~---------------------~~~~v~~GDV~~iPaG~~h~i~N~ 266 (539)
.|++.-+ |||=+-+-++.-+.|+=+..+..|... ....|++|||++||+|++|+..+.
T Consensus 172 p~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~ 251 (489)
T 4diq_A 172 PPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQ 251 (489)
T ss_dssp CSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEEEBC
T ss_pred CCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEEEec
Confidence 4454434 555555555555666666666665421 146899999999999999999999
Q ss_pred CCCceEEEEEEe
Q 039441 267 DNVDRLHVAKLL 278 (539)
Q Consensus 267 g~~e~L~iv~l~ 278 (539)
++.-.+.+-.-+
T Consensus 252 ~~~~SlhlTi~~ 263 (489)
T 4diq_A 252 DGVHSLHLTLST 263 (489)
T ss_dssp SSCCEEEEEEEE
T ss_pred CCCceEEEeecc
Confidence 754455544433
No 236
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=92.89 E-value=0.28 Score=53.08 Aligned_cols=78 Identities=19% Similarity=0.209 Sum_probs=52.0
Q ss_pred cCCceecceecCCCC-EEEEEEeceEEEEEecCCCCc------cchhhhhhhhHHHHHHh-h-hcceeeEEeeeCCCcEE
Q 039441 366 NQGGMMVPHYNSKAT-TIVLVVEGRGRFEMGGPLSSR------WSQESQREQQEEEEEEE-S-SRELQKISANLSPGVVF 436 (539)
Q Consensus 366 ~pGgm~~PHwhpnA~-ei~yV~~G~g~v~vV~p~gs~------~s~~~~~g~~~~~~~e~-~-~~~y~~~~~~L~~GDV~ 436 (539)
.+|+....|+.+..+ .|..|+.|+=++-++.|.-.. +.... . +.+. . ...-+-+...|++||++
T Consensus 274 ~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~---~----~~~~~~~~~~~~~~~~~l~pGe~l 346 (488)
T 3kv5_D 274 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSV---T----QSEVFFGDKVDKCYKCVVKQGHTL 346 (488)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCS---S----GGGSCGGGSSSCCEEEEEETTCEE
T ss_pred CCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCC---c----cchhhhcccccceEEEeeCCCCEE
Confidence 577888889988755 678899999999999885211 00000 0 0000 0 00013445679999999
Q ss_pred EeCCCCeEEEEcCC
Q 039441 437 IIPPGHPIALVASP 450 (539)
Q Consensus 437 vVPaG~~h~i~n~g 450 (539)
+||+|+.|+++|..
T Consensus 347 fIPsGWwH~V~nle 360 (488)
T 3kv5_D 347 FVPTGWIHAVLTSQ 360 (488)
T ss_dssp EECTTCEEEEEEEE
T ss_pred EeCCCceEEeeCCC
Confidence 99999999999973
No 237
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=92.87 E-value=0.12 Score=53.00 Aligned_cols=58 Identities=24% Similarity=0.351 Sum_probs=43.2
Q ss_pred CCeeecccccCCCcEEEEEeceEEEEEEeCCC-------------------------------ceeeecCCCcEEEeCCC
Q 039441 210 PSTLVVPHHSDAETILVLLKGKGVITLVSHER-------------------------------RESFNMEHGDVISVPAG 258 (539)
Q Consensus 210 P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~-------------------------------~~~~~v~~GDV~~iPaG 258 (539)
|++..-+||-..+-|..++.|+=++.+..|.. .....|++||+++||+|
T Consensus 176 ~g~~~~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~LyiP~g 255 (338)
T 3al5_A 176 PGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPAL 255 (338)
T ss_dssp TTCEEEEECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCEEEECTT
T ss_pred CCCCccceECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCEEEECCC
Confidence 44444456544556667788998888887631 12457899999999999
Q ss_pred CeEEEEecC
Q 039441 259 TTYYLSNQD 267 (539)
Q Consensus 259 ~~h~i~N~g 267 (539)
..|++.|.+
T Consensus 256 WwH~v~~l~ 264 (338)
T 3al5_A 256 WFHNVISEE 264 (338)
T ss_dssp CEEEEEESS
T ss_pred CeEEEeeCC
Confidence 999999996
No 238
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=92.77 E-value=1.1 Score=43.19 Aligned_cols=104 Identities=11% Similarity=0.113 Sum_probs=69.5
Q ss_pred eEecCCceEEEeeccCccc-ccccC---cceeeEEEeeeCCCeeecccccC----CCcEEEEEeceEEEEEEeCCC----
Q 039441 174 RVRSDSGHMRVLQRFSQKS-HLLRG---IDNYRLAILEANPSTLVVPHHSD----AETILVLLKGKGVITLVSHER---- 241 (539)
Q Consensus 174 ~v~se~G~i~vl~~f~~~s-~~l~g---v~~~Rl~il~l~P~~l~lPh~~d----A~~~~yV~~G~g~i~~v~pg~---- 241 (539)
++..+-|.+. +.|.... ....| ....+.-+....++.++=.||+. ..++++|++|+....+|+-..
T Consensus 18 ~~~D~RG~f~--e~~~~~~f~~~~g~~~~~f~Q~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpT 95 (205)
T 1oi6_A 18 VFADDRGLLI--LPYQEEAFVEAHGGPLFRVAQTIHSMSKRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPT 95 (205)
T ss_dssp CEEETTEEEE--CSCBHHHHHHHHSSCCCCCCEEEEEEECTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTT
T ss_pred eEecCCcCEE--EEeehhhhHhhcCCCCCCEEEEEEEeCCCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCC
Confidence 3455667764 3455432 11112 23445555556789999899776 489999999999888888652
Q ss_pred ---ceeeecCC--CcEEEeCCCCeEEEEecCCCceEEEEEEeccC
Q 039441 242 ---RESFNMEH--GDVISVPAGTTYYLSNQDNVDRLHVAKLLQPV 281 (539)
Q Consensus 242 ---~~~~~v~~--GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~ 281 (539)
...+.|.. +-.++||+|++|-++|..++ ..++.+.+..
T Consensus 96 fG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~--a~~~y~~s~~ 138 (205)
T 1oi6_A 96 FGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD--TVMSYMLSRS 138 (205)
T ss_dssp TTCEEEEEECSSSCCEEEECTTCEEEEEECSTT--EEEEEEESSC
T ss_pred CCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC--eEEEEecCCc
Confidence 23556654 68999999999999999854 3445545433
No 239
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=92.73 E-value=0.42 Score=51.04 Aligned_cols=66 Identities=23% Similarity=0.360 Sum_probs=47.1
Q ss_pred CCCeeec-ccccCCCcEEEEEeceEEEEEEeCCCc-----------------eeeecCCCcEEEeCCCCeEEEEecCC-C
Q 039441 209 NPSTLVV-PHHSDAETILVLLKGKGVITLVSHERR-----------------ESFNMEHGDVISVPAGTTYYLSNQDN-V 269 (539)
Q Consensus 209 ~P~~l~l-Ph~~dA~~~~yV~~G~g~i~~v~pg~~-----------------~~~~v~~GDV~~iPaG~~h~i~N~g~-~ 269 (539)
.+++.-+ |||-+.+-++..+.|+=+..+..|..+ ....|++|||++||+|+.||..+.++ .
T Consensus 147 ~~g~~g~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~~~~ 226 (442)
T 2xdv_A 147 PAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPAGLA 226 (442)
T ss_dssp CTTCBCSCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECCSSSC
T ss_pred CCCCCCccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEecCCCc
Confidence 4555544 666555666667779888888777521 24689999999999999999999862 2
Q ss_pred ceEEE
Q 039441 270 DRLHV 274 (539)
Q Consensus 270 e~L~i 274 (539)
..+.+
T Consensus 227 ~Slhl 231 (442)
T 2xdv_A 227 HSTHV 231 (442)
T ss_dssp CEEEE
T ss_pred ceeec
Confidence 34544
No 240
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=92.54 E-value=0.18 Score=51.16 Aligned_cols=71 Identities=15% Similarity=0.095 Sum_probs=46.5
Q ss_pred eeCCCeeecccccCCCcEEEEEeceEEE--EEEe-CCCc-----eeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 207 EANPSTLVVPHHSDAETILVLLKGKGVI--TLVS-HERR-----ESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 207 ~l~P~~l~lPh~~dA~~~~yV~~G~g~i--~~v~-pg~~-----~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
+|.||+.+.|| .|.-++.+...|..++ .++. |++. ..+..++|.+|+|-...+||..|.++..++ .+++
T Consensus 97 rL~PG~~I~~H-rD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~GE~w~~d~~~~H~v~N~g~~~RI--hLv~ 173 (290)
T 1e5r_A 97 RNLKNAIVIPH-RDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRPGEIWFLDAATVHSAVNFSEISRQ--SLCV 173 (290)
T ss_dssp EEEESEEEEEE-CCC--------CBCCEEEECSCCTTEEEEETTEEECCCTTEEEECCTTSCEEEEESSSSCCC--EEEE
T ss_pred EeCCCCEeeCc-cCccccccccCCceEEEeeEecCCCcEEEECCEEEecCCCCEEEEcCCCeeEEEcCCCCCeE--EEEE
Confidence 77999999888 4544445455676544 4443 3332 468899999999999999999999865554 4455
Q ss_pred cc
Q 039441 279 QP 280 (539)
Q Consensus 279 d~ 280 (539)
|-
T Consensus 174 D~ 175 (290)
T 1e5r_A 174 DF 175 (290)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 241
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=92.53 E-value=0.86 Score=43.09 Aligned_cols=104 Identities=10% Similarity=0.062 Sum_probs=69.5
Q ss_pred eEecCCceEEEeeccCcccccccC--cceeeEEEeeeCCCeeeccccc---CCCcEEEEEeceEEEEEEeCCC-------
Q 039441 174 RVRSDSGHMRVLQRFSQKSHLLRG--IDNYRLAILEANPSTLVVPHHS---DAETILVLLKGKGVITLVSHER------- 241 (539)
Q Consensus 174 ~v~se~G~i~vl~~f~~~s~~l~g--v~~~Rl~il~l~P~~l~lPh~~---dA~~~~yV~~G~g~i~~v~pg~------- 241 (539)
++..+-|.+. +.|....-.-.| ....+.-.....++.++=.||+ ...++++|++|+....+|+-..
T Consensus 21 ~~~D~RG~f~--e~~~~~~~~~~g~~~~f~Q~n~S~s~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~ 98 (185)
T 1ep0_A 21 VYTDERGYFM--ETFNEAIFQENGLEVRFVQDNESMSVRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGE 98 (185)
T ss_dssp EEEETTEEEE--CCCCHHHHHHTTCCCCCCEEEEEEEETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTC
T ss_pred eEecCCccEE--EEeehhhHHhcCCCCCEEEEEEEeCcCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCe
Confidence 4556667763 345543310012 2234444445568999988866 7789999999999888888653
Q ss_pred ceeeecC--CCcEEEeCCCCeEEEEecCCCceEEEEEEeccC
Q 039441 242 RESFNME--HGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPV 281 (539)
Q Consensus 242 ~~~~~v~--~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~ 281 (539)
...+.|. .+-.++||+|++|-++|..++ ..++.+.+..
T Consensus 99 ~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~--a~~~y~~s~~ 138 (185)
T 1ep0_A 99 WTGVRLSDENRREFFIPEGFAHGFLALSDE--CIVNYKCTEL 138 (185)
T ss_dssp EEEEEEETTTCCEEEECTTEEEEEEECSSE--EEEEEEESSC
T ss_pred EEEEEecCCCCCEEEeCCCeEEEEEEcCCC--eEEEEecCCc
Confidence 2345554 378999999999999999743 5555555543
No 242
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=92.48 E-value=0.36 Score=51.64 Aligned_cols=91 Identities=15% Similarity=0.116 Sum_probs=55.1
Q ss_pred EEEcCCceecceecCCCC-EEEEEEeceEEEEEecCCCCc-cchhhhhhhhHHHHHHh-h-hcceeeEEeeeCCCcEEEe
Q 039441 363 VEINQGGMMVPHYNSKAT-TIVLVVEGRGRFEMGGPLSSR-WSQESQREQQEEEEEEE-S-SRELQKISANLSPGVVFII 438 (539)
Q Consensus 363 v~L~pGgm~~PHwhpnA~-ei~yV~~G~g~v~vV~p~gs~-~s~~~~~g~~~~~~~e~-~-~~~y~~~~~~L~~GDV~vV 438 (539)
+-=.+|+....|+.+.++ .|..|+.|+=+.-++.|.-.. .....-... .. +.+. . ...-+-+...+++||+++|
T Consensus 236 ~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s-~~-~~~~~~~~~~~~~~~v~l~pGetlfI 313 (447)
T 3kv4_A 236 LMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSS-SN-QNEMFFGDQVDKCYKCSVKQGQTLFI 313 (447)
T ss_dssp EEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTC-SS-GGGSCGGGGSSCCEEEEEETTCEEEE
T ss_pred EEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccC-cc-hhhhhccccccceEEEEECCCcEEec
Confidence 333567777889888755 678899999999999886311 000000000 00 0000 0 0011335568999999999
Q ss_pred CCCCeEEEEcCCCCcEEE
Q 039441 439 PPGHPIALVASPNEKLLT 456 (539)
Q Consensus 439 PaG~~h~i~n~gne~l~~ 456 (539)
|+|+.|+++|..+ .+.+
T Consensus 314 PsGWwH~V~nled-sIai 330 (447)
T 3kv4_A 314 PTGWIHAVLTPVD-CLAF 330 (447)
T ss_dssp CTTCEEEEEESSC-EEEE
T ss_pred CCCCeEEEecCCC-EEEE
Confidence 9999999999843 3443
No 243
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=92.44 E-value=0.8 Score=44.11 Aligned_cols=74 Identities=11% Similarity=0.120 Sum_probs=56.0
Q ss_pred CCCeeecccccC----CCcEEEEEeceEEEEEEeCCCc-------eeeecC--CCcEEEeCCCCeEEEEecCCCceEEEE
Q 039441 209 NPSTLVVPHHSD----AETILVLLKGKGVITLVSHERR-------ESFNME--HGDVISVPAGTTYYLSNQDNVDRLHVA 275 (539)
Q Consensus 209 ~P~~l~lPh~~d----A~~~~yV~~G~g~i~~v~pg~~-------~~~~v~--~GDV~~iPaG~~h~i~N~g~~e~L~iv 275 (539)
.|+.++=.||+. ..++++|++|+....+|+-... ..+.|. .+-.++||+|++|-++|..++ ..++
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~--a~~~ 155 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH--TIVM 155 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS--EEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC--EEEE
Confidence 789999999875 6899999999999988885421 355665 488999999999999999853 4444
Q ss_pred EEeccCCCC
Q 039441 276 KLLQPVNTP 284 (539)
Q Consensus 276 ~l~d~~n~p 284 (539)
.+.+....|
T Consensus 156 Y~~s~~Y~p 164 (205)
T 3ryk_A 156 YKVDEYYSA 164 (205)
T ss_dssp EEESSCCCT
T ss_pred EEcCCCcCC
Confidence 444443333
No 244
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=92.38 E-value=1.4 Score=43.07 Aligned_cols=106 Identities=12% Similarity=0.105 Sum_probs=70.7
Q ss_pred eEecCCceEEEeeccCccc-ccccC--cceeeEEEeeeCCCeeecccccC----CCcEEEEEeceEEEEEEeCCCc----
Q 039441 174 RVRSDSGHMRVLQRFSQKS-HLLRG--IDNYRLAILEANPSTLVVPHHSD----AETILVLLKGKGVITLVSHERR---- 242 (539)
Q Consensus 174 ~v~se~G~i~vl~~f~~~s-~~l~g--v~~~Rl~il~l~P~~l~lPh~~d----A~~~~yV~~G~g~i~~v~pg~~---- 242 (539)
++..+-|.+. +.|.... ....| ....+.-+....++.++=.||+. ..++++|++|++...+|+-...
T Consensus 38 ~~~D~RG~F~--e~~~~~~~~~~~gi~~~f~Q~n~S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTf 115 (225)
T 1upi_A 38 IHVDSRGLFF--EWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTF 115 (225)
T ss_dssp EEEETTEEEE--CSCCHHHHHHHHSSCCCCCEEEEEEECTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTT
T ss_pred eEecCCcCEE--EEeehhhHHHhcCCCCCeEEEEEEeCCCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCC
Confidence 4566667765 3455432 11112 23445555556799999999876 4899999999998888875422
Q ss_pred ---eeeecCC--CcEEEeCCCCeEEEEecCCCceEEEEEEeccCCC
Q 039441 243 ---ESFNMEH--GDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNT 283 (539)
Q Consensus 243 ---~~~~v~~--GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~ 283 (539)
..+.|.. +-.++||+|++|-++|..++ .+++.+.+....
T Consensus 116 G~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~--a~vly~~s~~Y~ 159 (225)
T 1upi_A 116 GRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN--STVMYLCSAEYN 159 (225)
T ss_dssp TCEEEEEEETTTCCEEEECTTCEEEEEECSSS--EEEEEEESSCCC
T ss_pred CcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC--EEEEEecCCccC
Confidence 3455544 68999999999999999854 345555554333
No 245
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=92.32 E-value=0.86 Score=43.97 Aligned_cols=74 Identities=14% Similarity=0.143 Sum_probs=57.8
Q ss_pred eeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEe--CCCc-----eeeecCCCcEEEeCCC--CeEEEEecCCCc
Q 039441 200 NYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVS--HERR-----ESFNMEHGDVISVPAG--TTYYLSNQDNVD 270 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~--pg~~-----~~~~v~~GDV~~iPaG--~~h~i~N~g~~e 270 (539)
.+-|.+|...|+...-+|=|.+..++.|++|.-+.+.-. +++. ....+.+||+++|+++ .+|-+.|...++
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d~ 151 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDR 151 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSS
T ss_pred CEEEEEEEECCCCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCCC
Confidence 455777888999999999444999999999999887744 2222 2478999999999987 899999985445
Q ss_pred eEE
Q 039441 271 RLH 273 (539)
Q Consensus 271 ~L~ 273 (539)
..+
T Consensus 152 ~av 154 (211)
T 3uss_A 152 TSI 154 (211)
T ss_dssp CEE
T ss_pred CEE
Confidence 443
No 246
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=92.32 E-value=0.87 Score=43.01 Aligned_cols=104 Identities=12% Similarity=0.029 Sum_probs=68.4
Q ss_pred eEecCCceEEEeeccCccc-ccccC--cceeeEEEeeeCCCeeeccccc---CCCcEEEEEeceEEEEEEeCCC------
Q 039441 174 RVRSDSGHMRVLQRFSQKS-HLLRG--IDNYRLAILEANPSTLVVPHHS---DAETILVLLKGKGVITLVSHER------ 241 (539)
Q Consensus 174 ~v~se~G~i~vl~~f~~~s-~~l~g--v~~~Rl~il~l~P~~l~lPh~~---dA~~~~yV~~G~g~i~~v~pg~------ 241 (539)
++..+-|.+.. .|.... ....| ....+.-+....++.++=.||+ ...++++|++|+...-+|+-..
T Consensus 21 ~~~D~RG~f~e--~~~~~~~~~~~g~~~~f~Q~n~S~s~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg 98 (184)
T 2ixk_A 21 VFGDDRGFFFE--SYNQRAFEEACGHPVSFVQDNHSRSARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFG 98 (184)
T ss_dssp EEEETTEEEEE--EEEHHHHHHHHSSCCCCCEEEEEEEETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTT
T ss_pred eEecCCccEEE--EeehhhhHhhcCCCCCEEEEEEEeCCCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCC
Confidence 45566676653 444332 11112 2234444444568999988866 6789999999999888888543
Q ss_pred -ceeeecCC--CcEEEeCCCCeEEEEecCCCceEEEEEEeccC
Q 039441 242 -RESFNMEH--GDVISVPAGTTYYLSNQDNVDRLHVAKLLQPV 281 (539)
Q Consensus 242 -~~~~~v~~--GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~ 281 (539)
...+.|.. +-.++||+|++|-++|..++ ..++.+.+..
T Consensus 99 ~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~--a~~~y~~s~~ 139 (184)
T 2ixk_A 99 QWVGERLSAENKRQMWIPAGFAHGFVVLSEY--AEFLYKTTDF 139 (184)
T ss_dssp CEEEEEEETTTCCEEEECTTEEEEEEECSSE--EEEEEEESSC
T ss_pred eEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC--EEEEEeCCCc
Confidence 23455543 68999999999999999743 5555555543
No 247
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=92.26 E-value=0.5 Score=48.66 Aligned_cols=60 Identities=20% Similarity=0.184 Sum_probs=45.9
Q ss_pred CCCeeecccccCCC---cEEEEEeceEEEEEEeCCCc----------------------------------------eee
Q 039441 209 NPSTLVVPHHSDAE---TILVLLKGKGVITLVSHERR----------------------------------------ESF 245 (539)
Q Consensus 209 ~P~~l~lPh~~dA~---~~~yV~~G~g~i~~v~pg~~----------------------------------------~~~ 245 (539)
-|.+-..|-|.|.. .|..++.|+=++.++.|... ...
T Consensus 179 G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~~~~ 258 (336)
T 3k2o_A 179 GPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEI 258 (336)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCCEEE
T ss_pred CCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCceEEE
Confidence 55544555565554 49999999999999987631 023
Q ss_pred ecCCCcEEEeCCCCeEEEEecCC
Q 039441 246 NMEHGDVISVPAGTTYYLSNQDN 268 (539)
Q Consensus 246 ~v~~GDV~~iPaG~~h~i~N~g~ 268 (539)
.+++||+++||+|..|++.|.++
T Consensus 259 ~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 259 LQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp EECTTCEEEECTTCEEEEEESSC
T ss_pred EECCCCEEEeCCCCcEEEecCCC
Confidence 57999999999999999999973
No 248
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=92.20 E-value=0.28 Score=51.26 Aligned_cols=80 Identities=19% Similarity=0.245 Sum_probs=53.0
Q ss_pred EEEcCCceecceecCCCC-EEEEEEeceEEEEEecCCCCc------cchhhhhhhhHHHHHHh-hh-cceeeEEeeeCCC
Q 039441 363 VEINQGGMMVPHYNSKAT-TIVLVVEGRGRFEMGGPLSSR------WSQESQREQQEEEEEEE-SS-RELQKISANLSPG 433 (539)
Q Consensus 363 v~L~pGgm~~PHwhpnA~-ei~yV~~G~g~v~vV~p~gs~------~s~~~~~g~~~~~~~e~-~~-~~y~~~~~~L~~G 433 (539)
+-=.+|+....|+.+..+ .|..|+.|+=+.-++.|.... +..+. . +.+. .. ..-+-+...+++|
T Consensus 152 ~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~---~----~~e~~~~~~~~~~~ev~l~pG 224 (371)
T 3k3o_A 152 LMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSS---N----QNEMFFGDQVDKCYKCSVKQG 224 (371)
T ss_dssp EEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTST---T----GGGSCGGGTSSCCEEEEEETT
T ss_pred EEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCC---c----cchhhcccccCceEEEEECCC
Confidence 334577888889988866 477899999999999886321 00000 0 0000 00 0013355689999
Q ss_pred cEEEeCCCCeEEEEcC
Q 039441 434 VVFIIPPGHPIALVAS 449 (539)
Q Consensus 434 DV~vVPaG~~h~i~n~ 449 (539)
|+++||+|+.|+++|.
T Consensus 225 EtLfIPsGWwH~V~nl 240 (371)
T 3k3o_A 225 QTLFIPTGWIHAVLTP 240 (371)
T ss_dssp CEEEECTTCEEEEEEE
T ss_pred cEEEeCCCCeEEEecC
Confidence 9999999999999997
No 249
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=91.82 E-value=1.4 Score=42.61 Aligned_cols=107 Identities=8% Similarity=0.038 Sum_probs=70.9
Q ss_pred eeEecCCceEEEeeccCccc-ccccC--cceeeEEEeeeCCCeeecccccC----CCcEEEEEeceEEEEEEeCCC----
Q 039441 173 YRVRSDSGHMRVLQRFSQKS-HLLRG--IDNYRLAILEANPSTLVVPHHSD----AETILVLLKGKGVITLVSHER---- 241 (539)
Q Consensus 173 ~~v~se~G~i~vl~~f~~~s-~~l~g--v~~~Rl~il~l~P~~l~lPh~~d----A~~~~yV~~G~g~i~~v~pg~---- 241 (539)
.++..+-|.+. +.|.... ....| ....+.-+....++.++=.||+. ..++++|++|++...+|+-..
T Consensus 26 ~~~~D~RG~F~--e~~~~~~~~~~~gi~~~f~Q~n~S~s~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpT 103 (216)
T 2c0z_A 26 EQRADPRGVFL--DWYHVDRFAEAIGRPLRLAQANLSVSVRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPT 103 (216)
T ss_dssp EEEEETTEEEE--ECCCHHHHHHHHSSCCCCCEEEEEEEETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTT
T ss_pred CeEecCCcCEE--EEeehhHHHHhcCCCCCEEEEEEEeCCCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCC
Confidence 34566677765 3555433 11112 22344444455789999999876 489999999999888888642
Q ss_pred ---ceeeecCC--CcEEEeCCCCeEEEEecCCCceEEEEEEeccCCC
Q 039441 242 ---RESFNMEH--GDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNT 283 (539)
Q Consensus 242 ---~~~~~v~~--GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~ 283 (539)
...+.|.. +-.++||+|++|-++|..++ .+++.+.+....
T Consensus 104 fG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~--a~~ly~~s~~Y~ 148 (216)
T 2c0z_A 104 YGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE--ATLCYLSSGTYD 148 (216)
T ss_dssp TTCEEEEEEETTTCCEEEECTTEEEEEEECSSE--EEEEEEESSCCC
T ss_pred CCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC--eEEEEecCCccC
Confidence 23555544 57999999999999999753 445555554333
No 250
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=91.80 E-value=1.7 Score=40.92 Aligned_cols=80 Identities=9% Similarity=-0.007 Sum_probs=58.0
Q ss_pred eeEEEeeeCCCeeeccccc----CCCcEEEEEeceEEEEEEeCCC-------ceeeecCC--CcEEEeCCCCeEEEEecC
Q 039441 201 YRLAILEANPSTLVVPHHS----DAETILVLLKGKGVITLVSHER-------RESFNMEH--GDVISVPAGTTYYLSNQD 267 (539)
Q Consensus 201 ~Rl~il~l~P~~l~lPh~~----dA~~~~yV~~G~g~i~~v~pg~-------~~~~~v~~--GDV~~iPaG~~h~i~N~g 267 (539)
.+.-.....++.++=.||+ ...++++|++|+....+|+-.. ...+.|.. +-.++||+|++|-++|..
T Consensus 47 ~Q~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~ls 126 (183)
T 1dzr_A 47 VQDNHSKSKKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLS 126 (183)
T ss_dssp CEEEEEEEETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECS
T ss_pred EEEEEEeCCCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcC
Confidence 4444444568999988876 5689999999999888888652 23455543 689999999999999997
Q ss_pred CCceEEEEEEeccCC
Q 039441 268 NVDRLHVAKLLQPVN 282 (539)
Q Consensus 268 ~~e~L~iv~l~d~~n 282 (539)
++ ..++.+.+...
T Consensus 127 d~--a~~~y~~s~~Y 139 (183)
T 1dzr_A 127 EY--AEFLYKATNYY 139 (183)
T ss_dssp SE--EEEEEEESSCC
T ss_pred CC--eEEEEEcCCcc
Confidence 53 44555554433
No 251
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=91.70 E-value=0.5 Score=49.80 Aligned_cols=81 Identities=19% Similarity=0.196 Sum_probs=52.1
Q ss_pred EEEc-CCceecceecCCCC-EEEEEEeceEEEEEecCCCCc------cchhhhhhhhHHHHHHhh-hcceeeEEeeeCCC
Q 039441 363 VEIN-QGGMMVPHYNSKAT-TIVLVVEGRGRFEMGGPLSSR------WSQESQREQQEEEEEEES-SRELQKISANLSPG 433 (539)
Q Consensus 363 v~L~-pGgm~~PHwhpnA~-ei~yV~~G~g~v~vV~p~gs~------~s~~~~~g~~~~~~~e~~-~~~y~~~~~~L~~G 433 (539)
+-|. +|+....|+.+..+ .|..++.|+=+.-++.|.... +..+. . +.+.-. ...-+-+...+.+|
T Consensus 179 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~---~---~~e~~~~~~~~~~~~v~l~pG 252 (397)
T 3kv9_A 179 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSV---T---QSEVFFGDKVDKCYKCVVKQG 252 (397)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSG---G---GGGSCGGGGSSCCEEEEEETT
T ss_pred EEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCC---C---cchhhhccccCceEEEEECCC
Confidence 4444 46676779998865 578999999999999886311 00000 0 000000 00013345679999
Q ss_pred cEEEeCCCCeEEEEcC
Q 039441 434 VVFIIPPGHPIALVAS 449 (539)
Q Consensus 434 DV~vVPaG~~h~i~n~ 449 (539)
|+++||+|+.|++.|.
T Consensus 253 e~lfIPsGW~H~V~nl 268 (397)
T 3kv9_A 253 HTLFVPTGWIHAVLTS 268 (397)
T ss_dssp CEEEECTTCEEEEEEE
T ss_pred CEEEeCCCCeEEccCC
Confidence 9999999999999997
No 252
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=91.43 E-value=1.6 Score=42.01 Aligned_cols=82 Identities=11% Similarity=0.069 Sum_probs=62.6
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecC--CCCccchhhhhhhhHHHHHHhhhcceeeE-EeeeCCC
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGP--LSSRWSQESQREQQEEEEEEESSRELQKI-SANLSPG 433 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p--~gs~~s~~~~~g~~~~~~~e~~~~~y~~~-~~~L~~G 433 (539)
.+++..+...||--..+|=|. +.-++.|++|....++..- ++.- . ... ...|.+|
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~--------~-------------~~~~~~~l~~G 129 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRP--------H-------------PSGARRRLEPG 129 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCE--------E-------------ECSCCEEECTT
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCc--------c-------------cccceEEecCC
Confidence 478889999999999999997 9999999999999988552 2210 0 001 2569999
Q ss_pred cEEEeCCC--CeEEEEcC-CCCcEEEEEEe
Q 039441 434 VVFIIPPG--HPIALVAS-PNEKLLTVGFS 460 (539)
Q Consensus 434 DV~vVPaG--~~h~i~n~-gne~l~~v~F~ 460 (539)
||++++.+ ..|-+.|. +++..+-|-+.
T Consensus 130 ~v~~~~p~~g~IH~V~N~~~d~~avSLHvY 159 (211)
T 3uss_A 130 EVEALSPRIGDVHQVSNAFSDRTSISIHVY 159 (211)
T ss_dssp CEEEEBTTTBCCEEEEESCSSSCEEEEEEE
T ss_pred CEEEECCCCCCEEEEccCCCCCCEEEEEEc
Confidence 99999987 89999986 46665555443
No 253
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=91.09 E-value=0.52 Score=49.64 Aligned_cols=87 Identities=17% Similarity=0.152 Sum_probs=53.7
Q ss_pred EEEEcCCceecceecCCC-CEEEEEEeceEEEEEecCCCCcc-chhhhhhhhHHHHHHh-hh-cceeeEEeeeCCCcEEE
Q 039441 362 YVEINQGGMMVPHYNSKA-TTIVLVVEGRGRFEMGGPLSSRW-SQESQREQQEEEEEEE-SS-RELQKISANLSPGVVFI 437 (539)
Q Consensus 362 ~v~L~pGgm~~PHwhpnA-~ei~yV~~G~g~v~vV~p~gs~~-s~~~~~g~~~~~~~e~-~~-~~y~~~~~~L~~GDV~v 437 (539)
.+-=.+|+....|+.+.+ +.|..|+.|+=+.-++.|....- ....-... .. +.+. .. ..-+-+...+++||+++
T Consensus 178 ~~mGp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s-~~-~~e~~~~~~~~~~~ev~l~pGEtlf 255 (392)
T 3pua_A 178 CLICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSA-SN-HSEMFFADQVDKCYKCIVKQGQTLF 255 (392)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHS-TT-GGGSCGGGGSSCCEEEEEETTCEEE
T ss_pred EEEeCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccC-cc-hhhhhhcccccceEEEEECCCcEEe
Confidence 344457888888988885 57889999999998888853110 00000000 00 0000 00 00123456799999999
Q ss_pred eCCCCeEEEEcCC
Q 039441 438 IPPGHPIALVASP 450 (539)
Q Consensus 438 VPaG~~h~i~n~g 450 (539)
||+|+.|+++|..
T Consensus 256 IPsGWwH~V~nle 268 (392)
T 3pua_A 256 IPSGWIYATLTPV 268 (392)
T ss_dssp ECTTCEEEEEEEE
T ss_pred eCCCceEEEecCC
Confidence 9999999999973
No 254
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=90.90 E-value=0.48 Score=50.73 Aligned_cols=66 Identities=12% Similarity=0.208 Sum_probs=48.0
Q ss_pred eeEEEeeeCCCeeeccccc---CCCcEEEEEeceEEEEEEeCCCc--------------------------eeeecCCCc
Q 039441 201 YRLAILEANPSTLVVPHHS---DAETILVLLKGKGVITLVSHERR--------------------------ESFNMEHGD 251 (539)
Q Consensus 201 ~Rl~il~l~P~~l~lPh~~---dA~~~~yV~~G~g~i~~v~pg~~--------------------------~~~~v~~GD 251 (539)
+|..+ |-|.+-.-+-|. .+..|..|+.|+=+.-++.|... ....+++||
T Consensus 232 ~r~~~--mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGe 309 (447)
T 3kv4_A 232 QKYCL--MSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQ 309 (447)
T ss_dssp SCEEE--EECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTC
T ss_pred eeEEE--EeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCc
Confidence 44444 345444444443 44558999999999988888632 124689999
Q ss_pred EEEeCCCCeEEEEecCC
Q 039441 252 VISVPAGTTYYLSNQDN 268 (539)
Q Consensus 252 V~~iPaG~~h~i~N~g~ 268 (539)
+++||+|..|+++|.++
T Consensus 310 tlfIPsGWwH~V~nled 326 (447)
T 3kv4_A 310 TLFIPTGWIHAVLTPVD 326 (447)
T ss_dssp EEEECTTCEEEEEESSC
T ss_pred EEecCCCCeEEEecCCC
Confidence 99999999999999964
No 255
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=90.69 E-value=6 Score=37.01 Aligned_cols=112 Identities=13% Similarity=0.051 Sum_probs=74.8
Q ss_pred eeEEEEEEcCCceecceecCCCCEEEEEEeceE-EEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCc--
Q 039441 358 AGVTYVEINQGGMMVPHYNSKATTIVLVVEGRG-RFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGV-- 434 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g-~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GD-- 434 (539)
.++.+.-|.+|.+..-|-. +++||-+...|.. .+-++.++|.- .-.++-.+|..|+
T Consensus 53 ~TaIYfLL~~~~~S~~HRv-~sdEiW~~~~G~pL~l~~~~~dG~~--------------------~~~~LG~d~~~Ge~~ 111 (172)
T 3loi_A 53 LTMIYYLMQAGQPDPFHRV-KSDETFVHNLGGSMKIHMIHPDGSY--------------------SCSILGNPLEHPEAR 111 (172)
T ss_dssp CEEEEEEEETTCCEEEEEC-SSEEEEEEEEESCEEEEEECTTSCE--------------------EEEEESCTTTSTTCB
T ss_pred ceEEEEEEcCCCCccCEEe-cCCEEEEEEcCCCEEEEEEcCCCce--------------------EEEEeCCCcccCCcc
Confidence 5677788899996644443 6999999999975 89999998632 0023334677888
Q ss_pred -EEEeCCCCeEEEEcCCCCcEEEEEEeecCCCCccccccccchhcccCcHHHHHHHcCCCHHHHHHhh
Q 039441 435 -VFIIPPGHPIALVASPNEKLLTVGFSLNARNNQRNFLAGKINIMNQVERETMEVAFNVPARLIERVF 501 (539)
Q Consensus 435 -V~vVPaG~~h~i~n~gne~l~~v~F~~na~n~~~~fLAG~~svL~~~p~evLa~AF~vs~e~v~kL~ 501 (539)
.+|||+|+...-.. .+..+|+-.+.+.+ ..+ =|.-++++-|.+.|.--.+.|++|-
T Consensus 112 pQ~vVP~G~WqaA~~---~~~~LVsctVaPGF----~f~----dfel~~~~~L~~~~P~~~~~I~~lt 168 (172)
T 3loi_A 112 HQVVVPRRVWFAQEV---DGYCLASVLVAPGF----DFK----DFSLGKREELIKEYPQHRDVIMRCT 168 (172)
T ss_dssp SEEEECTTCEEEEEE---SSEEEEEEEEESCC----CGG----GCEECCHHHHHHHCGGGHHHHHHTS
T ss_pred eEEEECCCEEEEEEe---CCcEEEEEEEcCCc----cch----hcEEcCHHHHHHHCchHHHHHHHhc
Confidence 78999999777655 35777765555521 111 1122467777777866667777764
No 256
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=90.65 E-value=0.98 Score=48.20 Aligned_cols=65 Identities=17% Similarity=0.308 Sum_probs=45.9
Q ss_pred ceeeEEEeeeC--CC-eeecccccCCCcEEEEEeceEEEEEEeCCCcee-eecCCCcEEEeCCCCeEEEEec
Q 039441 199 DNYRLAILEAN--PS-TLVVPHHSDAETILVLLKGKGVITLVSHERRES-FNMEHGDVISVPAGTTYYLSNQ 266 (539)
Q Consensus 199 ~~~Rl~il~l~--P~-~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~-~~v~~GDV~~iPaG~~h~i~N~ 266 (539)
..+.+..+++. ++ ...++ -.+.+.|+.|++|+|+|+. .+.... ..|++||+++|||+....|.+.
T Consensus 355 ~eF~v~~~~~~~~~~~~~~~~-~~~~~~illv~~G~g~i~~--~~~~~~~~~l~~G~~~fvpa~~~~~i~g~ 423 (440)
T 1pmi_A 355 AEFSVLQTIFDKSKGGKQVIE-GLNGPSIVIATNGKGTIQI--TGDDSTKQKIDTGYVFFVAPGSSIELTAD 423 (440)
T ss_dssp SSCEEEEEECCTTTCCEEEEC-CCSSCEEEEEEESEEEEEE--TTCGGGCEEEETTCEEEECTTCCEEEEEC
T ss_pred CeEEEEEEEecCCCCceeEEe-cCCCcEEEEEEeCeEEEEe--CCcccceEEeccCCEEEEeCCCcEEEEEe
Confidence 34555556667 44 23332 2367889999999999876 222122 6899999999999987778876
No 257
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=90.55 E-value=1.3 Score=42.23 Aligned_cols=71 Identities=17% Similarity=0.207 Sum_probs=55.6
Q ss_pred eEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCC--Cc-----eeeecCCCcEEEeCCCCeEEEEecCCCceEEE
Q 039441 202 RLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHE--RR-----ESFNMEHGDVISVPAGTTYYLSNQDNVDRLHV 274 (539)
Q Consensus 202 Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg--~~-----~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~i 274 (539)
...+..|.|++-+-||.-..+..+ +.-++++.|. |. ++...+.|.+|+|-.-..|+..|.++. -+|
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~n~~l-----R~HL~L~~p~~~~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~--~Rv 175 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPTNCRL-----RMHLGLVIPKEGCKIRCANETKTWEEGKVLIFDDSFEHEVWQDASS--FRL 175 (197)
T ss_dssp EEEEEEECTTEEEEEECCSCTTEE-----EEEEEEECCSSSEEEEETTEEECCCBTCEEEECTTSCEEEEECSSS--CEE
T ss_pred eEEEEEeCCCCCcCCeeCCCCCeE-----EEEEEEEeCCCCcEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCC--CEE
Confidence 467788999999999976544333 6678888875 32 467899999999999999999999743 556
Q ss_pred EEEec
Q 039441 275 AKLLQ 279 (539)
Q Consensus 275 v~l~d 279 (539)
++++|
T Consensus 176 vL~~D 180 (197)
T 3rcq_A 176 IFIVD 180 (197)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 67776
No 258
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=90.37 E-value=0.6 Score=50.01 Aligned_cols=61 Identities=13% Similarity=0.195 Sum_probs=48.7
Q ss_pred eCCCeeecccccCC---CcEEEEEeceEEEEEEeCCCce--------------------------eeecCCCcEEEeCCC
Q 039441 208 ANPSTLVVPHHSDA---ETILVLLKGKGVITLVSHERRE--------------------------SFNMEHGDVISVPAG 258 (539)
Q Consensus 208 l~P~~l~lPh~~dA---~~~~yV~~G~g~i~~v~pg~~~--------------------------~~~v~~GDV~~iPaG 258 (539)
|-|.+-..|-|.|- ..|..|+.|+=+.-++.|.... ...|.+||+++||+|
T Consensus 202 mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsG 281 (451)
T 2yu1_A 202 MSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSG 281 (451)
T ss_dssp EECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTT
T ss_pred EccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCC
Confidence 46666666777665 4589999999999999887421 246789999999999
Q ss_pred CeEEEEecCC
Q 039441 259 TTYYLSNQDN 268 (539)
Q Consensus 259 ~~h~i~N~g~ 268 (539)
..|+++|.++
T Consensus 282 WwH~V~nled 291 (451)
T 2yu1_A 282 WIHAVYTPTD 291 (451)
T ss_dssp CEEEEECSSC
T ss_pred ceEEEecCCC
Confidence 9999999973
No 259
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=90.10 E-value=2.4 Score=45.42 Aligned_cols=86 Identities=13% Similarity=0.054 Sum_probs=58.9
Q ss_pred CceEEEeCCcccccccccceeEEEEEEcCCce-ecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHH
Q 039441 339 FGRFFEATPKDYQQLQEIDAGVTYVEINQGGM-MVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEE 417 (539)
Q Consensus 339 ~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm-~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e 417 (539)
-|..+.+.+ .-+.++. |+++.....+. +| -.-.+|.++++++|+-+|.+.+.-..-
T Consensus 140 ~Gl~tl~gn-gD~~~~~-G~aI~~y~~n~-sM~~~~f~NaDGD~Livpq~G~l~i~TEfG-------------------- 196 (471)
T 1eyb_A 140 SGLHTLCGA-GDIKSNN-GLAIHIFLCNT-SMENRCFYNSDGDFLIVPQKGNLLIYTEFG-------------------- 196 (471)
T ss_dssp TTEEEEEEE-SCGGGTC-CEEEEEEEECS-CCCSEEEEESSEEEEEEEEESCEEEEETTE--------------------
T ss_pred cchhheecc-CCccccc-ceEEEEEeCCC-CcccceeecCCCCEEEEEEeCCEEEEEecc--------------------
Confidence 455444443 3333332 56665555554 56 556788899999999999998865443
Q ss_pred hhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEEE
Q 039441 418 ESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTVG 458 (539)
Q Consensus 418 ~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v~ 458 (539)
++ .|++||++|||+|..+.+.-.+ +...+.
T Consensus 197 -------~L--~v~pgei~VIPRGi~frv~l~~--p~Rgyi 226 (471)
T 1eyb_A 197 -------KM--LVQPNEICVIQRGMRFSIDVFE--ETRGYI 226 (471)
T ss_dssp -------EE--EECTTEEEEECTTCCEEEECSS--SEEEEE
T ss_pred -------cE--EeccCCEEEECCccEEEEeeCC--CceEEE
Confidence 33 5899999999999999887664 554443
No 260
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=89.79 E-value=0.62 Score=50.40 Aligned_cols=60 Identities=15% Similarity=0.189 Sum_probs=45.2
Q ss_pred eCCCeeecccccC---CCcEEEEEeceEEEEEEeCCCc--------------------------eeeecCCCcEEEeCCC
Q 039441 208 ANPSTLVVPHHSD---AETILVLLKGKGVITLVSHERR--------------------------ESFNMEHGDVISVPAG 258 (539)
Q Consensus 208 l~P~~l~lPh~~d---A~~~~yV~~G~g~i~~v~pg~~--------------------------~~~~v~~GDV~~iPaG 258 (539)
|-|.+-.-|-|.| +..|..|+.|+=+..++.|... ....+++||+++||+|
T Consensus 272 mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsG 351 (488)
T 3kv5_D 272 MGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTG 351 (488)
T ss_dssp EECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTT
T ss_pred EcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCC
Confidence 3454444444444 4458899999999999988531 1246899999999999
Q ss_pred CeEEEEecC
Q 039441 259 TTYYLSNQD 267 (539)
Q Consensus 259 ~~h~i~N~g 267 (539)
..|+++|.+
T Consensus 352 WwH~V~nle 360 (488)
T 3kv5_D 352 WIHAVLTSQ 360 (488)
T ss_dssp CEEEEEEEE
T ss_pred ceEEeeCCC
Confidence 999999986
No 261
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=89.43 E-value=0.4 Score=50.16 Aligned_cols=60 Identities=15% Similarity=0.218 Sum_probs=45.2
Q ss_pred eCCCeeecccccC---CCcEEEEEeceEEEEEEeCCCc--------------------------eeeecCCCcEEEeCCC
Q 039441 208 ANPSTLVVPHHSD---AETILVLLKGKGVITLVSHERR--------------------------ESFNMEHGDVISVPAG 258 (539)
Q Consensus 208 l~P~~l~lPh~~d---A~~~~yV~~G~g~i~~v~pg~~--------------------------~~~~v~~GDV~~iPaG 258 (539)
|-|.+-.-|-|.| +..|..|+.|+=+.-++.|... ....+++||+++||+|
T Consensus 153 mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsG 232 (371)
T 3k3o_A 153 MSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTG 232 (371)
T ss_dssp EECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTT
T ss_pred EcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCC
Confidence 3555545555544 3458899999999988887632 1246899999999999
Q ss_pred CeEEEEecC
Q 039441 259 TTYYLSNQD 267 (539)
Q Consensus 259 ~~h~i~N~g 267 (539)
..|+++|.+
T Consensus 233 WwH~V~nle 241 (371)
T 3k3o_A 233 WIHAVLTPV 241 (371)
T ss_dssp CEEEEEEEE
T ss_pred CeEEEecCC
Confidence 999999986
No 262
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=89.40 E-value=9.8 Score=36.46 Aligned_cols=113 Identities=14% Similarity=0.186 Sum_probs=68.1
Q ss_pred eeEEEEEEcCCc-eecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCc--
Q 039441 358 AGVTYVEINQGG-MMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGV-- 434 (539)
Q Consensus 358 isva~v~L~pGg-m~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GD-- 434 (539)
.++.+.-|++++ +..-|=. +|++|-|...|.+..-++.+++.- .-.++-.+|..|+
T Consensus 79 ~TaIYfLL~~~~~~S~wHRv-~sdEiW~~h~G~p~~~li~~dg~~--------------------~~~~LG~dl~~Ge~p 137 (203)
T 1xe7_A 79 STLIYYLLTPDSPIGKFHKN-INRIIHILQRGKGQYVLVYPDGQV--------------------KSFKVGFDYKNGEVS 137 (203)
T ss_dssp CEEEEEEEBTTBCEEEEEEE-SSCEEEEEEEECEEEEEECTTSCE--------------------EEEEESSCGGGTCBS
T ss_pred eeEEEEEEcCCCCcccceee-CCCEEEEEEcCCccEEEEcCCCCE--------------------EEEEeCCCcccCccc
Confidence 456667788887 6644443 699999999998877778887631 0023344566676
Q ss_pred EEEeCCCCeEEEEcCCCCcE---EEEEEeecCCCCccccccccchhcccCcHH-HHHHHcCCCHHHHHHhh
Q 039441 435 VFIIPPGHPIALVASPNEKL---LTVGFSLNARNNQRNFLAGKINIMNQVERE-TMEVAFNVPARLIERVF 501 (539)
Q Consensus 435 V~vVPaG~~h~i~n~gne~l---~~v~F~~na~n~~~~fLAG~~svL~~~p~e-vLa~AF~vs~e~v~kL~ 501 (539)
.+|||+|+...-....+... .+|+-.+.+.+ . .+ =|.-++++ .|.+.|. .+.+++|.
T Consensus 138 Q~vVPaG~WqaA~~~~~~~~~~~tLVgCtVaPGF---d-F~----dFel~~~~~~L~~~~P--~~~~~~l~ 198 (203)
T 1xe7_A 138 QWVVPGGVFKASFLLPNEEFDNGFLISEVVVPGF---D-FE----DHTFLKGEDELKHLVG--PEKAAELA 198 (203)
T ss_dssp EEEECTTCEEEEEECCCTTTTTCEEEEEEESSCC---C-GG----GEEECCHHHHHHHHHC--HHHHHHTG
T ss_pred EEEEcCCEEEEeEecCCCCcccceEEEEEecCCc---c-ch----hcEecCCcHHHHHHCC--HHHHHHHH
Confidence 48999999887654322222 56654555521 1 11 12223555 5566664 56666654
No 263
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=88.89 E-value=6.6 Score=38.20 Aligned_cols=132 Identities=8% Similarity=0.059 Sum_probs=74.6
Q ss_pred eeEEEEEEcCCceecceecC-CCCEEEEEEeceE-EEEEecCCCCc----cchhhhhhhhHH--HHHHhhhc---ceee-
Q 039441 358 AGVTYVEINQGGMMVPHYNS-KATTIVLVVEGRG-RFEMGGPLSSR----WSQESQREQQEE--EEEEESSR---ELQK- 425 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhp-nA~ei~yV~~G~g-~v~vV~p~gs~----~s~~~~~g~~~~--~~~e~~~~---~y~~- 425 (539)
.++.+.-|++|... |||- ++++|-+...|.. .+-++.++|.. .-+. +...+ ....+... .|+.
T Consensus 60 ~TaIYfLL~~g~~S--~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~---~~~P~~~~~~~~~~~~~~~~~~~ 134 (225)
T 3m3i_A 60 YTTIYFLCTPESPS--HLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQP---PAAPQAETDTADARPKYQVYRRV 134 (225)
T ss_dssp CEEEEEEECSSSCE--EEEECSSEEEEEEEEESCEEEEEEESSSTTTTC---------------------CCSSCEEEEE
T ss_pred ceeEEEEecCCCCc--ccEEecCCEEEEEECCCCEEEEEEcCCCcccccccccc---cccccccccccccccccCceEEE
Confidence 56677788999975 5553 6999999999985 78888887610 0000 00000 00000000 1222
Q ss_pred -EEeeeCCCc--EEEeCCCCeEEEEcCCCC-----cEEEEEEeecCCCCccccccccchhcccCcHHHHHHHcCCCHHHH
Q 039441 426 -ISANLSPGV--VFIIPPGHPIALVASPNE-----KLLTVGFSLNARNNQRNFLAGKINIMNQVERETMEVAFNVPARLI 497 (539)
Q Consensus 426 -~~~~L~~GD--V~vVPaG~~h~i~n~gne-----~l~~v~F~~na~n~~~~fLAG~~svL~~~p~evLa~AF~vs~e~v 497 (539)
+-.+|..|+ .+|||+|+...-...++. +..+|+-.+.+.+ ..+ =|.-++++-|.+.|.--.+.|
T Consensus 135 ~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCtVaPGF----dF~----DFel~~~~~L~~~~P~~~~~I 206 (225)
T 3m3i_A 135 LVGARVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCIVSPGF----DYR----DFEIFTQAQLMELYPQHEAVI 206 (225)
T ss_dssp EESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEEEESCC----CGG----GCEECBHHHHHHHCGGGHHHH
T ss_pred EeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEEEcCCc----cch----hcEecCHHHHHHHCchHHHHH
Confidence 223456676 579999998877655443 5677765555522 111 112246777777776666777
Q ss_pred HHhhc
Q 039441 498 ERVFG 502 (539)
Q Consensus 498 ~kL~~ 502 (539)
.+|-.
T Consensus 207 ~~lt~ 211 (225)
T 3m3i_A 207 KQMAY 211 (225)
T ss_dssp HHHSB
T ss_pred HHhch
Confidence 77743
No 264
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=88.78 E-value=0.48 Score=49.91 Aligned_cols=65 Identities=17% Similarity=0.223 Sum_probs=47.7
Q ss_pred eeEEEeeeCCCeeecccccC---CCcEEEEEeceEEEEEEeCCCc--------------------------eeeecCCCc
Q 039441 201 YRLAILEANPSTLVVPHHSD---AETILVLLKGKGVITLVSHERR--------------------------ESFNMEHGD 251 (539)
Q Consensus 201 ~Rl~il~l~P~~l~lPh~~d---A~~~~yV~~G~g~i~~v~pg~~--------------------------~~~~v~~GD 251 (539)
+|..+ |-|.+-.-+-|.| ++.|..|+.|+=+.-++.|... ....+++||
T Consensus 175 ~r~~~--mGp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGE 252 (392)
T 3pua_A 175 TKYCL--ICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQ 252 (392)
T ss_dssp SCEEE--EECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTC
T ss_pred eeEEE--EeCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCc
Confidence 55544 3454444444443 4679999999999988887642 124679999
Q ss_pred EEEeCCCCeEEEEecC
Q 039441 252 VISVPAGTTYYLSNQD 267 (539)
Q Consensus 252 V~~iPaG~~h~i~N~g 267 (539)
+++||+|..|+++|.+
T Consensus 253 tlfIPsGWwH~V~nle 268 (392)
T 3pua_A 253 TLFIPSGWIYATLTPV 268 (392)
T ss_dssp EEEECTTCEEEEEEEE
T ss_pred EEeeCCCceEEEecCC
Confidence 9999999999999986
No 265
>2lqx_A Trypsin inhibitor BWI-2C; helical hairpin, hydrolase inhibitor; NMR {Fagopyrum esculentum}
Probab=88.26 E-value=0.085 Score=36.68 Aligned_cols=39 Identities=21% Similarity=0.538 Sum_probs=33.2
Q ss_pred CCchhhHHHHHHHhhhhccchHhHHHHHHHHHHHHhhhh
Q 039441 99 RDPKWQHEQCLKQCERRESGEQQQQQCKSWCEKHRQKGQ 137 (539)
Q Consensus 99 ~~p~~~~~~c~~~c~~~~~~~~~~~~c~~~c~~~~~~~~ 137 (539)
..|++.|..|+.-|..-+-+.+--.+|...|++++..||
T Consensus 2 ekpqqeleecqnvcrmkrwstemvhrcekkceekferqq 40 (41)
T 2lqx_A 2 EKPQQELEECQNVCRMKRWSTEMVHRCEKKCEEKFERQQ 40 (41)
Confidence 358889999999999988566678899999999987765
No 266
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=88.49 E-value=1 Score=49.10 Aligned_cols=87 Identities=11% Similarity=0.137 Sum_probs=52.7
Q ss_pred EEEEcCCceecceecCCC-CEEEEEEeceEEEEEecCCCCc-cchhhhhhhhHHHHHHhhhcce--eeEEeeeCCCcEEE
Q 039441 362 YVEINQGGMMVPHYNSKA-TTIVLVVEGRGRFEMGGPLSSR-WSQESQREQQEEEEEEESSREL--QKISANLSPGVVFI 437 (539)
Q Consensus 362 ~v~L~pGgm~~PHwhpnA-~ei~yV~~G~g~v~vV~p~gs~-~s~~~~~g~~~~~~~e~~~~~y--~~~~~~L~~GDV~v 437 (539)
.+--..|+....|..+.+ +.|..|+.|+=+.-++.|.-.. .-...-... . ....-..+.+ ..+...+.+|++++
T Consensus 300 ~lmg~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s-~-~~~~wfgd~l~~~~~~v~l~pGEtlf 377 (528)
T 3pur_A 300 CLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETS-P-DTTTWFGDIANGAVKRVVIKEGQTLL 377 (528)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHS-S-CCSCCGGGGTTTCCEEEEEETTCEEE
T ss_pred EEEeCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccC-C-chhhhhcccccccEEEEEECCCCEEE
Confidence 344457888888988875 4788999999999888875211 000000000 0 0000000111 12345799999999
Q ss_pred eCCCCeEEEEcCC
Q 039441 438 IPPGHPIALVASP 450 (539)
Q Consensus 438 VPaG~~h~i~n~g 450 (539)
||+|+.|+++|..
T Consensus 378 IPsGW~HaV~tle 390 (528)
T 3pur_A 378 IPAGWIHAVLTPV 390 (528)
T ss_dssp ECTTCEEEEEEEE
T ss_pred ecCCceEEEecCC
Confidence 9999999999973
No 267
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=87.50 E-value=3 Score=40.02 Aligned_cols=72 Identities=14% Similarity=0.144 Sum_probs=54.0
Q ss_pred eeCCCeeecccccC----CCcEEEEEeceEEEEEEeCC--Cc-----eeeecC--CCcEEEeCCCCeEEEEecCCCceEE
Q 039441 207 EANPSTLVVPHHSD----AETILVLLKGKGVITLVSHE--RR-----ESFNME--HGDVISVPAGTTYYLSNQDNVDRLH 273 (539)
Q Consensus 207 ~l~P~~l~lPh~~d----A~~~~yV~~G~g~i~~v~pg--~~-----~~~~v~--~GDV~~iPaG~~h~i~N~g~~e~L~ 273 (539)
...++.++=.||.. ..++++|+.|+....+|+-. .+ ....|. .+-.++||+|++|=+++..++ ..
T Consensus 50 ~S~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~--a~ 127 (201)
T 4hn1_A 50 VSHRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD--AT 127 (201)
T ss_dssp EECTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT--EE
T ss_pred EcCCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC--eE
Confidence 34789999999764 68999999999999999854 22 244554 588999999999999999753 33
Q ss_pred EEEEecc
Q 039441 274 VAKLLQP 280 (539)
Q Consensus 274 iv~l~d~ 280 (539)
++...+.
T Consensus 128 ~~Y~~t~ 134 (201)
T 4hn1_A 128 LVFLCSS 134 (201)
T ss_dssp EEEEESS
T ss_pred EEEeCCC
Confidence 4444443
No 268
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=87.50 E-value=3.4 Score=36.84 Aligned_cols=73 Identities=12% Similarity=0.175 Sum_probs=53.5
Q ss_pred EEEeeccCcccccccCcceeeEEEeeeCCCeeeccc---ccCCCcE--EEEEeceEEEEEEeCCCc----eeeecCCCcE
Q 039441 182 MRVLQRFSQKSHLLRGIDNYRLAILEANPSTLVVPH---HSDAETI--LVLLKGKGVITLVSHERR----ESFNMEHGDV 252 (539)
Q Consensus 182 i~vl~~f~~~s~~l~gv~~~Rl~il~l~P~~l~lPh---~~dA~~~--~yV~~G~g~i~~v~pg~~----~~~~v~~GDV 252 (539)
++.++.|+..+ -|.+|+.+| ...+..| +-|++|+......+.++. +..-+.+|+.
T Consensus 11 yk~tP~~t~~t----------------lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~ 74 (127)
T 3bb6_A 11 TRSTPFWNKQT----------------APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQF 74 (127)
T ss_dssp EEECCCBCTTT----------------SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBE
T ss_pred eeecCCCCccc----------------ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCc
Confidence 45566788776 788998888 5555555 569999988876665432 3345689999
Q ss_pred EEeCCCCeEEEEecCCCc
Q 039441 253 ISVPAGTTYYLSNQDNVD 270 (539)
Q Consensus 253 ~~iPaG~~h~i~N~g~~e 270 (539)
+.||++..|.|.-..++-
T Consensus 75 ~~i~Pq~wH~Ve~lsdd~ 92 (127)
T 3bb6_A 75 AVFPPEKWHNIEAMTDDT 92 (127)
T ss_dssp EECCSSCEEEEEESSTTC
T ss_pred eEECCCCcEEEEEcCCCE
Confidence 999999999999754333
No 269
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=87.41 E-value=0.81 Score=48.25 Aligned_cols=60 Identities=15% Similarity=0.189 Sum_probs=45.8
Q ss_pred eCCCeeecccccC---CCcEEEEEeceEEEEEEeCCCc--------------------------eeeecCCCcEEEeCCC
Q 039441 208 ANPSTLVVPHHSD---AETILVLLKGKGVITLVSHERR--------------------------ESFNMEHGDVISVPAG 258 (539)
Q Consensus 208 l~P~~l~lPh~~d---A~~~~yV~~G~g~i~~v~pg~~--------------------------~~~~v~~GDV~~iPaG 258 (539)
|-|.+-.-|-|.| +..|..++.|+=+.-++.|... ....+++||+++||+|
T Consensus 181 mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsG 260 (397)
T 3kv9_A 181 MGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTG 260 (397)
T ss_dssp EECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTT
T ss_pred EcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCC
Confidence 3565555554444 4568999999999999988632 1236799999999999
Q ss_pred CeEEEEecC
Q 039441 259 TTYYLSNQD 267 (539)
Q Consensus 259 ~~h~i~N~g 267 (539)
..|+++|.+
T Consensus 261 W~H~V~nle 269 (397)
T 3kv9_A 261 WIHAVLTSQ 269 (397)
T ss_dssp CEEEEEEEE
T ss_pred CeEEccCCc
Confidence 999999986
No 270
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=87.09 E-value=0.66 Score=50.51 Aligned_cols=59 Identities=14% Similarity=0.225 Sum_probs=43.6
Q ss_pred CCCeeecccc--cCCCcEEEEEeceEEEEEEeCCCc--------------------------eeeecCCCcEEEeCCCCe
Q 039441 209 NPSTLVVPHH--SDAETILVLLKGKGVITLVSHERR--------------------------ESFNMEHGDVISVPAGTT 260 (539)
Q Consensus 209 ~P~~l~lPh~--~dA~~~~yV~~G~g~i~~v~pg~~--------------------------~~~~v~~GDV~~iPaG~~ 260 (539)
..+++.-.|. ..++.|.+|+.|+=+.-++.|... ....+++||+++||+|..
T Consensus 304 ~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~ 383 (528)
T 3pur_A 304 MAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWI 383 (528)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCce
Confidence 3344444442 334559999999999988877631 024688999999999999
Q ss_pred EEEEecC
Q 039441 261 YYLSNQD 267 (539)
Q Consensus 261 h~i~N~g 267 (539)
|.++|..
T Consensus 384 HaV~tle 390 (528)
T 3pur_A 384 HAVLTPV 390 (528)
T ss_dssp EEEEEEE
T ss_pred EEEecCC
Confidence 9999985
No 271
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=86.46 E-value=3.8 Score=39.06 Aligned_cols=79 Identities=13% Similarity=0.145 Sum_probs=56.6
Q ss_pred eEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCC-CCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEE
Q 039441 359 GVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPL-SSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFI 437 (539)
Q Consensus 359 sva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~-gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~v 437 (539)
+|.+..|.||+-..||..|....+ +..++++.|. +.. ...--.+...++|.+++
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~n~~l------R~HL~L~~p~~~~~-------------------i~V~~~~~~w~eGe~~~ 157 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPTNCRL------RMHLGLVIPKEGCK-------------------IRCANETKTWEEGKVLI 157 (197)
T ss_dssp EEEEEEECTTEEEEEECCSCTTEE------EEEEEEECCSSSEE-------------------EEETTEEECCCBTCEEE
T ss_pred eEEEEEeCCCCCcCCeeCCCCCeE------EEEEEEEeCCCCcE-------------------EEECCEEEEeeCCcEEE
Confidence 588899999999999998765544 3445666664 211 00001135689999999
Q ss_pred eCCCCeEEEEcCCCCcEEEEEEeec
Q 039441 438 IPPGHPIALVASPNEKLLTVGFSLN 462 (539)
Q Consensus 438 VPaG~~h~i~n~gne~l~~v~F~~n 462 (539)
+=-.+.|...|.++++-.++.|..-
T Consensus 158 fDds~~Hev~N~~d~~RvvL~~D~~ 182 (197)
T 3rcq_A 158 FDDSFEHEVWQDASSFRLIFIVDVW 182 (197)
T ss_dssp ECTTSCEEEEECSSSCEEEEEEEEE
T ss_pred EcCCeEEEEEECCCCCEEEEEEeee
Confidence 9999999999998887776666543
No 272
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=86.10 E-value=1.2 Score=45.26 Aligned_cols=42 Identities=17% Similarity=0.383 Sum_probs=34.0
Q ss_pred cCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEE
Q 039441 219 SDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLS 264 (539)
Q Consensus 219 ~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~ 264 (539)
.++..|+.|++|+|+|+. . ..++.|++||.++|||++.-|..
T Consensus 267 ~~~~~il~v~~G~~~l~~--~--~~~~~l~~G~~~~vpa~~~~~~i 308 (319)
T 1qwr_A 267 DESFLICSVIEGSGLLKY--E--DKTCPLKKGDHFILPAQMPDFTI 308 (319)
T ss_dssp CSSCEEEEEEEEEEEEEE--T--TEEEEEETTCEEEECTTCCCEEE
T ss_pred CCccEEEEEEcCeEEEEE--C--CEEEEEcCCcEEEEeCCCceEEE
Confidence 478889999999999976 2 34679999999999999844433
No 273
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=86.07 E-value=1.4 Score=46.23 Aligned_cols=60 Identities=13% Similarity=0.291 Sum_probs=42.8
Q ss_pred cceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEE
Q 039441 198 IDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYL 263 (539)
Q Consensus 198 v~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i 263 (539)
+..+.+..+++.++...+ -.+++.|+.|++|+|+|+. .+ .+..|++||+++|||++.-|.
T Consensus 321 ~~~F~v~~~~l~~~~~~~--~~~~~~il~v~~G~~~l~~--~~--~~~~l~~G~~~fvpa~~~~~~ 380 (394)
T 2wfp_A 321 VDDFAFSLHDLALQETSI--GQHSAAILFCVEGEAVLRK--DE--QRLVLKPGESAFIGADESPVN 380 (394)
T ss_dssp SSSCEEEEEECCSSCEEE--CCSSCEEEEEEEEEEEEEE--TT--EEEEECTTCEEEECGGGCCEE
T ss_pred CCEEEEEEEEEcCCeEEe--cCCCcEEEEEEeceEEEEE--CC--eEEEEccCcEEEEeCCCceEE
Confidence 344556566667654433 3467899999999998765 22 568999999999999964433
No 274
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=84.94 E-value=4.5 Score=40.01 Aligned_cols=73 Identities=11% Similarity=0.229 Sum_probs=55.2
Q ss_pred EEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCC
Q 039441 362 YVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPG 441 (539)
Q Consensus 362 ~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG 441 (539)
...+.||+=+.||=|.+-..|.||++|...- -++.|. ...|++|||-++-||
T Consensus 68 ~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H--~DS~Gn--------------------------~~~i~~GdvQ~MtAG 119 (256)
T 2vec_A 68 QEVLAPGAAFQPRTYPKVDILNVILDGEAEY--RDSEGN--------------------------HVQASAGEALLLSTQ 119 (256)
T ss_dssp EEEECTTCEEEEECCSSEEEEEEEEESEEEE--EETTSC--------------------------EEEEETTEEEEECCC
T ss_pred ccccCCCCccCCcCCCCcEEEEEEEeeEEEE--EeCCCC--------------------------EEEECCCeEEEEECC
Confidence 4567888888999997777799999998654 344442 246999999999877
Q ss_pred C--eEEEEcCC-CCcEEEEEEeec
Q 039441 442 H--PIALVASP-NEKLLTVGFSLN 462 (539)
Q Consensus 442 ~--~h~i~n~g-ne~l~~v~F~~n 462 (539)
. .|..+|.. ++++.++-+-++
T Consensus 120 ~GI~HsE~n~~~~~~l~~lQlWi~ 143 (256)
T 2vec_A 120 PGVSYSEHNLSKDKPLTRMQLWLD 143 (256)
T ss_dssp TTCCEEEEECCSSSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCceEEEEEEEEe
Confidence 5 78888864 467888866555
No 275
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=84.07 E-value=2.5 Score=42.74 Aligned_cols=83 Identities=12% Similarity=0.086 Sum_probs=52.1
Q ss_pred eeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCc--cchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 358 AGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSR--WSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~--~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
+.++++.|.|||.+.||-.| .+..+...|..|+-|--...+. ..- .-....+++|.+
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~v-------------------dg~~~~m~~GE~ 149 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSN-------------------EDTVIHMRPGEI 149 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEE-------------------TTEEECCCTTEE
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEE-------------------CCEEEecCCCCE
Confidence 36787899999999999643 3444455777666664333221 000 012357899999
Q ss_pred EEeCCCCeEEEEcCCCCcEEEEEEee
Q 039441 436 FIIPPGHPIALVASPNEKLLTVGFSL 461 (539)
Q Consensus 436 ~vVPaG~~h~i~n~gne~l~~v~F~~ 461 (539)
+++=...+|+..|.++.+-..+.++.
T Consensus 150 w~~d~~~~H~v~N~g~~~RIhLv~D~ 175 (290)
T 1e5r_A 150 WFLDAATVHSAVNFSEISRQSLCVDF 175 (290)
T ss_dssp EECCTTSCEEEEESSSSCCCEEEEEE
T ss_pred EEEcCCCeeEEEcCCCCCeEEEEEEe
Confidence 99999999999998886655554454
No 276
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=84.02 E-value=6.1 Score=33.46 Aligned_cols=71 Identities=15% Similarity=0.119 Sum_probs=55.8
Q ss_pred ceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 357 DAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 357 ~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
+-......|.||- -++++.+.|++=|+.|...+.+-.... ...+.+|+-|
T Consensus 22 G~~~TvGVm~pGe---ytF~T~~~E~M~vvsG~~~V~lpg~~e---------------------------w~~~~aGesF 71 (94)
T 2oyz_A 22 GQDVSVGVMLPGE---YTFGTQAPERMTVVKGALVVKRVGEAD---------------------------WTTYSSGESF 71 (94)
T ss_dssp TEEEEEEEECSEE---EEEEESSCEEEEEEESEEEEEETTCSS---------------------------CEEEETTCEE
T ss_pred CCCEEEEEEeceE---EEEcCCCeEEEEEEEeEEEEEcCCCCc---------------------------CEEECCCCEE
Confidence 4566677788885 478899999999999999887765431 2457999999
Q ss_pred EeCCCCeEEEEcCCCCcEEEEEE
Q 039441 437 IIPPGHPIALVASPNEKLLTVGF 459 (539)
Q Consensus 437 vVPaG~~h~i~n~gne~l~~v~F 459 (539)
.||++.-+-+... +...++|.
T Consensus 72 ~Vpans~F~l~v~--~~~~YlC~ 92 (94)
T 2oyz_A 72 DVEGNSSFELQVK--DATAYLCE 92 (94)
T ss_dssp EECSSEEEEEEES--SCEEEEEE
T ss_pred EECCCCEEEEEEc--ccEeEEEE
Confidence 9999999888775 55888874
No 277
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=84.02 E-value=3.8 Score=39.24 Aligned_cols=98 Identities=15% Similarity=0.164 Sum_probs=56.7
Q ss_pred EEEEEEcCCceecceecCCCC--EEEEEEe--ceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcE
Q 039441 360 VTYVEINQGGMMVPHYNSKAT--TIVLVVE--GRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVV 435 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~--ei~yV~~--G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV 435 (539)
+=.+...+|+...+|.|+++. -+.||-- +.|.+.+..|.....-.....+.. ...... ......-++||+
T Consensus 105 ~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~----~~~~~~--~~~~i~P~~G~l 178 (216)
T 2rg4_A 105 IWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKG----AREELR--TFRSVAPKVGDV 178 (216)
T ss_dssp EEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCC----SCGGGC--SEEEECCCTTEE
T ss_pred EEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCccccc----CcccCC--CeeEecCCCCeE
Confidence 455667899999999998753 3445543 346666666632100000000000 000000 112456799999
Q ss_pred EEeCCCCeEEEEcC-CCCcEEEEEEeecC
Q 039441 436 FIIPPGHPIALVAS-PNEKLLTVGFSLNA 463 (539)
Q Consensus 436 ~vVPaG~~h~i~n~-gne~l~~v~F~~na 463 (539)
+++|.-++|.+.-. ++++-..|+|....
T Consensus 179 vlFpS~l~H~V~p~~~~~~RiSIsFN~~~ 207 (216)
T 2rg4_A 179 LLWESWLRHEVPMNMAEEDRISVSFNYAW 207 (216)
T ss_dssp EEEETTSCEEECCCCSSSCEEEEEEEEEC
T ss_pred EEECCCCEEeccCCCCCCCEEEEEEEeec
Confidence 99999999998764 34567777876553
No 278
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=83.62 E-value=2.1 Score=43.28 Aligned_cols=58 Identities=22% Similarity=0.325 Sum_probs=40.2
Q ss_pred ceeeEEEeeeCCCeeecccccCCC-cEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEE
Q 039441 199 DNYRLAILEANPSTLVVPHHSDAE-TILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLS 264 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh~~dA~-~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~ 264 (539)
..+.+..+++.+ ...+.. ++. .|+.|++| |+|+. .+ .+..|++||+++|||++.-|..
T Consensus 228 ~~F~v~~~~~~~-~~~~~~--~~~~~il~v~~G-~~i~~--~~--~~~~l~~G~~~~ipa~~~~~~i 286 (300)
T 1zx5_A 228 ENFGLEVVDVTG-TAEIKT--GGVMNILYAAEG-YFILR--GK--ETADLHRGYSCLVPASTDSFTV 286 (300)
T ss_dssp SSEEEEEEEEEE-EEEEEC--CSBCEEEEEEES-CEEEE--SS--SEEEECTTCEEEECTTCCEEEE
T ss_pred CeEEEEEEEECC-ceEEec--CCceEEEEEccc-EEEEe--CC--eEEEEccceEEEEeCCCceEEE
Confidence 344555555564 333333 777 89999999 98876 22 4568999999999999854443
No 279
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=83.06 E-value=2.7 Score=35.61 Aligned_cols=54 Identities=17% Similarity=0.294 Sum_probs=44.7
Q ss_pred eeeccc-c---cCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecC
Q 039441 212 TLVVPH-H---SDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQD 267 (539)
Q Consensus 212 ~l~lPh-~---~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g 267 (539)
|+.+|- | .+++++.=|+.|...|-+ ||..+-..+.+||.+.|||.+-+-|.-..
T Consensus 28 GVm~pGeytF~T~~~E~M~vvsG~~~V~l--pg~~ew~~~~aGesF~Vpans~F~l~v~~ 85 (94)
T 2oyz_A 28 GVMLPGEYTFGTQAPERMTVVKGALVVKR--VGEADWTTYSSGESFDVEGNSSFELQVKD 85 (94)
T ss_dssp EEECSEEEEEEESSCEEEEEEESEEEEEE--TTCSSCEEEETTCEEEECSSEEEEEEESS
T ss_pred EEEeceEEEEcCCCeEEEEEEEeEEEEEc--CCCCcCEEECCCCEEEECCCCEEEEEEcc
Confidence 345555 3 689999999999987766 88888889999999999999998887653
No 280
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=82.99 E-value=12 Score=37.13 Aligned_cols=100 Identities=15% Similarity=0.233 Sum_probs=59.1
Q ss_pred CCCceeecC--ccceeEecCCceEEEee-ccCcccccccCcceeeEEEeeeCCCee-ecccccCCCcEEEEEeceEEEEE
Q 039441 161 NNPYYFHSQ--RFRYRVRSDSGHMRVLQ-RFSQKSHLLRGIDNYRLAILEANPSTL-VVPHHSDAETILVLLKGKGVITL 236 (539)
Q Consensus 161 ~~py~f~~~--~f~~~v~se~G~i~vl~-~f~~~s~~l~gv~~~Rl~il~l~P~~l-~lPh~~dA~~~~yV~~G~g~i~~ 236 (539)
..|.|-... .+ +.+..+++.++++- .++...-.+.--....+.-++|+|++- .+|--.+-..++||++|++.|+
T Consensus 125 ~~P~y~~~~~~~i-p~~~~~g~~~rviaG~~~g~~~p~~~~~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~- 202 (277)
T 2p17_A 125 TEPRYQNLRSKDM-PVRKEEGATIRVFSGSSKGVKAPTKNIVPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG- 202 (277)
T ss_dssp CCCEEEEECGGGS-CEEEETTEEEEEEESEETTEECCCCCSSCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET-
T ss_pred CCCcceeeccccC-CeeeeCCeEEEEEEcCccCCCCceecCCCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC-
Confidence 345554432 23 33344566677654 233322122222344555566799874 4554445568999999997763
Q ss_pred EeCCCceeeecCCCcEEEeCC-C----CeEEEEecC
Q 039441 237 VSHERRESFNMEHGDVISVPA-G----TTYYLSNQD 267 (539)
Q Consensus 237 v~pg~~~~~~v~~GDV~~iPa-G----~~h~i~N~g 267 (539)
+. ...|.+||.++|.. | ...-|.+..
T Consensus 203 ---g~--~~~l~~~d~~~~~~~~~~~~~~l~l~a~~ 233 (277)
T 2p17_A 203 ---AD--NIEGKAGQALFFSRHNRGEETELNVTARE 233 (277)
T ss_dssp ---TT--TEEEETTEEEEECCCCTTCEEEEEEEESS
T ss_pred ---CC--ceEeCCCcEEEEcCCCCCccceEEEEeCC
Confidence 21 23699999999986 7 667777754
No 281
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=82.82 E-value=24 Score=32.38 Aligned_cols=101 Identities=11% Similarity=0.122 Sum_probs=65.1
Q ss_pred CCceEEEeCCcccccccccceeEEEEEEcCCceecceecC--CCCEEEEEEece-EEEEEecCCCCccchhhhhhhhHHH
Q 039441 338 NFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNS--KATTIVLVVEGR-GRFEMGGPLSSRWSQESQREQQEEE 414 (539)
Q Consensus 338 ~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhp--nA~ei~yV~~G~-g~v~vV~p~gs~~s~~~~~g~~~~~ 414 (539)
.+|...+........-+. -.++.+.-|++|... |||- +|+||-|...|. ..+-++.+++..
T Consensus 21 EGG~yrEt~Rs~~~~~R~-~~TaIYfLL~~g~~S--~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~------------- 84 (154)
T 1znp_A 21 EGGFYHQTFRDKAGGERG-HSTAIYYLLEKGVRS--HWHRVTDAVEVWHYYAGAPIALHLSQDGREV------------- 84 (154)
T ss_dssp TSSEEEEEEECSSSTTTC-SCEEEEEEEESSCCE--EEEEETTSCEEEEEEEESCEEEEEESSSSCC-------------
T ss_pred CCccEEEEEeCCCCCCCc-ceeEEEEEecCCCCC--cceeccCCCEEEEeECCCCEEEEEEcCCCcE-------------
Confidence 466655554332222222 245566668888876 5554 599999999997 677788887632
Q ss_pred HHHhhhcceeeEEeeeCCCcE--EEeCCCCeEEEEcCCCCcEEEEEEeecC
Q 039441 415 EEEESSRELQKISANLSPGVV--FIIPPGHPIALVASPNEKLLTVGFSLNA 463 (539)
Q Consensus 415 ~~e~~~~~y~~~~~~L~~GDV--~vVPaG~~h~i~n~gne~l~~v~F~~na 463 (539)
.-.++-.+|..|++ +|||+|+...-...+ +..+|+-.+.+
T Consensus 85 -------~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~g--~~~LVsCtVaP 126 (154)
T 1znp_A 85 -------QTFTLGPAILEGERPQVIVPANCWQSAESLG--DFTLVGCTVSP 126 (154)
T ss_dssp -------EEEEESSCTTTTEESEEEECTTCEEEEEESS--SEEEEEEEESS
T ss_pred -------EEEEeCCCcccCcccEEEEcCCEEEEeeECC--CeEEEEEEecC
Confidence 00234456778875 899999988876553 57777656565
No 282
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=82.63 E-value=8 Score=34.08 Aligned_cols=76 Identities=12% Similarity=0.161 Sum_probs=58.4
Q ss_pred eEEEeeccCcccccccCcceeeEEEeeeCCCeeecccccCCCcEEE--EEeceEEEEEEeCCCc----eeeecCCCcEEE
Q 039441 181 HMRVLQRFSQKSHLLRGIDNYRLAILEANPSTLVVPHHSDAETILV--LLKGKGVITLVSHERR----ESFNMEHGDVIS 254 (539)
Q Consensus 181 ~i~vl~~f~~~s~~l~gv~~~Rl~il~l~P~~l~lPh~~dA~~~~y--V~~G~g~i~~v~pg~~----~~~~v~~GDV~~ 254 (539)
.++.++.|+..+ -|.+|+..|-..+.-|+- |++|+.+......++. +..-+.+|+...
T Consensus 12 ~Yk~tP~~t~~t----------------lP~~l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~ 75 (119)
T 3dl3_A 12 IQRSTPFFTKDN----------------VPEALLTHHNTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFAT 75 (119)
T ss_dssp EEEECCCBCTTT----------------CCHHHHSSBCCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEE
T ss_pred EeccCCCCChhh----------------chHHHHhccCCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCce
Confidence 345567788876 688888889888888875 8999998887765432 445778999999
Q ss_pred eCCCCeEEEEecCCCceEE
Q 039441 255 VPAGTTYYLSNQDNVDRLH 273 (539)
Q Consensus 255 iPaG~~h~i~N~g~~e~L~ 273 (539)
||+.+.|.|.-.| +-.+.
T Consensus 76 i~Pq~wHrVe~sd-D~~f~ 93 (119)
T 3dl3_A 76 SPPQYWHRIELSD-DAQFN 93 (119)
T ss_dssp ECTTCEEEEEECT-TCEEE
T ss_pred eCCCceEEEEECC-CeEEE
Confidence 9999999999554 34443
No 283
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=81.02 E-value=6.2 Score=35.19 Aligned_cols=74 Identities=14% Similarity=0.161 Sum_probs=51.9
Q ss_pred CCceecce---e-cCCCCEEEEEEeceEEEEEecCCCC-ccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCC
Q 039441 367 QGGMMVPH---Y-NSKATTIVLVVEGRGRFEMGGPLSS-RWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPG 441 (539)
Q Consensus 367 pGgm~~PH---w-hpnA~ei~yV~~G~g~v~vV~p~gs-~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG 441 (539)
|++++.+| . ++..-..+-|++|+..+-.+...+. .- ... --+.+|+..+||++
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~---------------------~~~-~l~~~~~~~~i~Pq 80 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEP---------------------DQV-ILIEAGQFAVFPPE 80 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSC---------------------SEE-EEEEBTBEEECCSS
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcce---------------------eEE-EEeCCCCceEECCC
Confidence 56777888 3 3334466789999999988777653 10 011 23579999999999
Q ss_pred CeEEEEcCCCCcEEE-EEEeecC
Q 039441 442 HPIALVASPNEKLLT-VGFSLNA 463 (539)
Q Consensus 442 ~~h~i~n~gne~l~~-v~F~~na 463 (539)
..|.+....+ ++.| |.|...+
T Consensus 81 ~wH~Ve~lsd-d~~f~leFyc~~ 102 (127)
T 3bb6_A 81 KWHNIEAMTD-DTYFNIDFFVAP 102 (127)
T ss_dssp CEEEEEESST-TCEEEEEEEECH
T ss_pred CcEEEEEcCC-CEEEEEEEEeCC
Confidence 9999998534 5666 7776554
No 284
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=77.61 E-value=2.6 Score=43.90 Aligned_cols=50 Identities=12% Similarity=0.030 Sum_probs=37.0
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCc-eeeecCCCcEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERR-ESFNMEHGDVI 253 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~-~~~~v~~GDV~ 253 (539)
......++.++.-.--.++.+++|++|.+.|..-..|.. ....+.+||++
T Consensus 169 ~~~~~~~Ge~I~~qGd~~d~~YiI~sG~v~v~~~~~G~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 169 FEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSF 219 (416)
T ss_dssp EEEEECTTCEEECTTSCCCEEEEEEECEEEEEEECSSCEEEEEEEESCCEE
T ss_pred EEEEeCCCCEEEeCCCCCceEEEEEeeEEEEEEecCCCEEEEEEecCCCEE
Confidence 344568999998888888999999999999887333322 24567788866
No 285
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=77.31 E-value=23 Score=30.77 Aligned_cols=71 Identities=15% Similarity=0.166 Sum_probs=55.0
Q ss_pred eEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe
Q 039441 359 GVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII 438 (539)
Q Consensus 359 sva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV 438 (539)
......|-||- -+-++++.+.|++=|+.|...|.+-.... ...+.+|+-|.|
T Consensus 38 ~kTlGVm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lpg~~e---------------------------W~~~~aGesF~V 89 (111)
T 3hqx_A 38 KKTLGVILPTE-QPLTFETHVPERMEIISGECRVKIADSTE---------------------------SELFRAGQSFYV 89 (111)
T ss_dssp EEEEEEECCCS-SCEEEECSSCEEEEEEESEEEEEETTCSS---------------------------CEEEETTCEEEE
T ss_pred EEEEEEEeccc-cceEEcCCCcEEEEEEEeEEEEEcCCccc---------------------------CEEeCCCCEEEE
Confidence 45666778874 01478899999999999999887765431 145799999999
Q ss_pred CCCCeEEEEcCCCCcEEEEEE
Q 039441 439 PPGHPIALVASPNEKLLTVGF 459 (539)
Q Consensus 439 PaG~~h~i~n~gne~l~~v~F 459 (539)
|++.-+-+... +...++|-
T Consensus 90 panssF~lkv~--~~~~Y~C~ 108 (111)
T 3hqx_A 90 PGNSLFKIETD--EVLDYVCH 108 (111)
T ss_dssp CTTCEEEEECS--SCEEEEEE
T ss_pred CCCCcEEEEEC--cceeEEEE
Confidence 99999888775 56888884
No 286
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=76.74 E-value=64 Score=32.23 Aligned_cols=80 Identities=13% Similarity=0.184 Sum_probs=51.4
Q ss_pred CcceeeEEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCe-EEEEecCCCceEEEE
Q 039441 197 GIDNYRLAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTT-YYLSNQDNVDRLHVA 275 (539)
Q Consensus 197 gv~~~Rl~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~-h~i~N~g~~e~L~iv 275 (539)
|-+-.++.+ .|+=-+-|.-+.|+.=+||++|...+| -..+.+|+-+++|||+. =.|.-.| ++...|+
T Consensus 90 GaSTl~V~f---pp~~~~P~Gi~~ad~E~fVL~G~i~~G--------~~~l~~h~Y~f~PaGV~~~~~kv~~-~~g~~iL 157 (303)
T 2qdr_A 90 GASTSRVVL---PPKFEAPSGIFTADLEIFVIKGAIQLG--------EWQLNKHSYSFIPAGVRIGSWKVLG-GEEAEIL 157 (303)
T ss_dssp SCEEEEEEE---CTTCEECCBEESSCEEEEEEESEEEET--------TEEECTTEEEEECTTCCBCCEEEET-TSCEEEE
T ss_pred CcceEEEEe---cCCCCCCCcccccceEEEEEEeEEEeC--------CEEecCCceEEecCCCccCceeecC-CCCcEEE
Confidence 445556666 554444445778888899999998876 47899999999999993 3444444 3445444
Q ss_pred EEeccCCCCCCcee
Q 039441 276 KLLQPVNTPGQFRV 289 (539)
Q Consensus 276 ~l~d~~n~pg~f~~ 289 (539)
. |..+..|=.|..
T Consensus 158 ~-fe~g~~pl~y~~ 170 (303)
T 2qdr_A 158 W-MENGSVPLEYKY 170 (303)
T ss_dssp E-EECSSSCCCEEC
T ss_pred E-EecCCccccccc
Confidence 3 344444433333
No 287
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=76.29 E-value=4.4 Score=34.19 Aligned_cols=51 Identities=14% Similarity=0.171 Sum_probs=41.4
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVIS 254 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~~ 254 (539)
.+.+..++.++...--.++.++||++|.+.+...++++.+ ...+.+||++-
T Consensus 29 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 81 (149)
T 2pqq_A 29 SEVTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIG 81 (149)
T ss_dssp EEEEECTTCEEECTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEec
Confidence 4556699999888777788999999999999998876553 56788899873
No 288
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=76.23 E-value=10 Score=32.76 Aligned_cols=69 Identities=17% Similarity=0.213 Sum_probs=51.6
Q ss_pred eeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEE
Q 039441 358 AGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFI 437 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~v 437 (539)
-......|.||- -++++.+.|++=|+.|...+.+-.... ...+.+|+-|.
T Consensus 36 ~~kTlGVm~PGe---Y~F~T~~~E~MevvsG~l~V~LpG~~e---------------------------W~~~~aGesF~ 85 (106)
T 3eo6_A 36 SMHSLTLLHPGV---YTLSSEVAETIRVLSGMAYYHAEGAND---------------------------VQELHAGDSMV 85 (106)
T ss_dssp CEEEEEEECSEE---EEECCSSCEEEEEEEEEEEEECTTCSS---------------------------CEEEETTCEEE
T ss_pred CeEEEEEEeeeE---EEecCCCcEEEEEEEeEEEEECCCCcc---------------------------CEEECCCCEEE
Confidence 345566777874 578999999999999998886654321 24579999999
Q ss_pred eCCCCeEEEEcCCCCcEEEEE
Q 039441 438 IPPGHPIALVASPNEKLLTVG 458 (539)
Q Consensus 438 VPaG~~h~i~n~gne~l~~v~ 458 (539)
||++.-+-+... +...++|
T Consensus 86 VpanssF~lkv~--~~t~Y~C 104 (106)
T 3eo6_A 86 IPANQSYRLEVM--EPLDYLL 104 (106)
T ss_dssp ECSSSCEEEEEE--EEEEEEE
T ss_pred ECCCCcEEEEEC--ceEEEEE
Confidence 999988887664 3566665
No 289
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=75.82 E-value=17 Score=35.49 Aligned_cols=74 Identities=15% Similarity=0.161 Sum_probs=54.7
Q ss_pred EEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCC
Q 039441 362 YVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPG 441 (539)
Q Consensus 362 ~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG 441 (539)
...+.||+=+.||=|.+-..|.||++|...- -++.|. ...|++|||-++-||
T Consensus 45 ~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H--~DS~Gn--------------------------~~~i~~GdvQ~MtAG 96 (242)
T 1tq5_A 45 DDVIEAGQGFGTHPHKDMEILTYVLEGTVEH--QDSMGN--------------------------KEQVPAGEFQIMSAG 96 (242)
T ss_dssp EEEECTTCEEEEEEECSCEEEEEEEESEEEE--EESSSC--------------------------EEEEETTCEEEEECT
T ss_pred cceeCCCCcCCCcCCCCcEEEEEEEEeEEEE--EeCCCC--------------------------cEEECCCcEEEEECC
Confidence 4567888888999998888899999998644 344442 246999999999777
Q ss_pred --CeEEEEcCC-CCcEEEEEEeecC
Q 039441 442 --HPIALVASP-NEKLLTVGFSLNA 463 (539)
Q Consensus 442 --~~h~i~n~g-ne~l~~v~F~~na 463 (539)
..|..+|.. ++++.++-+-+++
T Consensus 97 ~GI~HsE~~~~~~~~l~~lQlWv~P 121 (242)
T 1tq5_A 97 TGIRHSEYNPSSTERLHLYQIWIMP 121 (242)
T ss_dssp TCEEEEEECCCSSCCEEEEEEEECC
T ss_pred CCcEEEEEcCCCCCeEEEEEEEEcc
Confidence 557778854 4678888655444
No 290
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=75.32 E-value=4.4 Score=34.01 Aligned_cols=52 Identities=12% Similarity=0.186 Sum_probs=38.3
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce-----eeecCCCcEEE
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE-----SFNMEHGDVIS 254 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~-----~~~v~~GDV~~ 254 (539)
..+.+..|+.++...-..++.++||++|.+.+....+++.+ ...+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 44556699999888888899999999999999888776543 55788898874
No 291
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=73.81 E-value=4.6 Score=37.09 Aligned_cols=51 Identities=18% Similarity=0.249 Sum_probs=41.3
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVIS 254 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~~ 254 (539)
.+.+..++.++...-..++.++||++|.+.+...++++.+ ...+.+||++-
T Consensus 23 ~~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 75 (213)
T 1o5l_A 23 KVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIA 75 (213)
T ss_dssp EEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESS
T ss_pred EEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEee
Confidence 3445599998888777888999999999999999887654 46788999873
No 292
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=73.53 E-value=4.2 Score=34.65 Aligned_cols=51 Identities=14% Similarity=0.132 Sum_probs=39.6
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEE
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVI 253 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~ 253 (539)
..+.+..|+.++...-..++.++||++|.+.+....+++.+ ...+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 44556699999988878889999999999999888776543 5678899987
No 293
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=73.04 E-value=7.2 Score=33.71 Aligned_cols=53 Identities=23% Similarity=0.374 Sum_probs=42.8
Q ss_pred eeeccc-c---cCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEec
Q 039441 212 TLVVPH-H---SDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQ 266 (539)
Q Consensus 212 ~l~lPh-~---~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~ 266 (539)
|+++|- | .+++++.=|+.|...|-+ ||...-..+..|+-+.|||.+-|-|.-.
T Consensus 41 GVm~PGeY~F~T~~~E~MevvsG~l~V~L--pG~~eW~~~~aGesF~VpanssF~lkv~ 97 (106)
T 3eo6_A 41 TLLHPGVYTLSSEVAETIRVLSGMAYYHA--EGANDVQELHAGDSMVIPANQSYRLEVM 97 (106)
T ss_dssp EEECSEEEEECCSSCEEEEEEEEEEEEEC--TTCSSCEEEETTCEEEECSSSCEEEEEE
T ss_pred EEEeeeEEEecCCCcEEEEEEEeEEEEEC--CCCccCEEECCCCEEEECCCCcEEEEEC
Confidence 455665 3 689999999999876654 8877888999999999999888876654
No 294
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=72.85 E-value=7 Score=34.97 Aligned_cols=50 Identities=8% Similarity=-0.009 Sum_probs=41.2
Q ss_pred EeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEEE
Q 039441 205 ILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVIS 254 (539)
Q Consensus 205 il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~~ 254 (539)
+.+.++|.++...--.++.++||++|.+.+..+++++.+ ..-+.+||++-
T Consensus 32 ~~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 32 LKKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred EEEEcCCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 445589998888777889999999999999999887654 45678999885
No 295
>2l2r_A Antimicrobial peptide ecamp1; disulfide-stabilized helical hairpin, antifungal peptide, antimicrobial protein; NMR {Echinochloa crus-galli}
Probab=72.80 E-value=2.9 Score=28.91 Aligned_cols=24 Identities=38% Similarity=0.733 Sum_probs=15.6
Q ss_pred HHHHHhh-hhccchHhHHHHHHHHH
Q 039441 107 QCLKQCE-RRESGEQQQQQCKSWCE 130 (539)
Q Consensus 107 ~c~~~c~-~~~~~~~~~~~c~~~c~ 130 (539)
.|.++|- .-+.-|-.++.|+.+|+
T Consensus 6 eCRrqC~Rr~edePWr~QECm~qCr 30 (37)
T 2l2r_A 6 SCRSQCMRRHEDEPWRVQECVSQCR 30 (37)
T ss_dssp CHHHHHHHHTSSCGGGHHHHHHHHH
T ss_pred HHHHHHHHhccCCccHHHHHHHHHH
Confidence 3777773 33433457788988886
No 296
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=71.97 E-value=7.4 Score=33.07 Aligned_cols=66 Identities=20% Similarity=0.257 Sum_probs=39.9
Q ss_pred EcCCceecceecCCCCEEEEEEe-ceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCe
Q 039441 365 INQGGMMVPHYNSKATTIVLVVE-GRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHP 443 (539)
Q Consensus 365 L~pGgm~~PHwhpnA~ei~yV~~-G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~ 443 (539)
-+.||+++|--.-.-.....|+. |.|+. ..+| ......|+.||.++++.||.
T Consensus 20 kT~gGI~LP~sakeKp~~G~VvAVG~G~~---~~~G------------------------~~~p~~VkvGD~Vlf~k~y~ 72 (97)
T 1pcq_O 20 KSAGGIVLTGSAAAKSTRGEVLAVGNGRI---LENG------------------------EVKPLDVKVGDIVIFNDGYG 72 (97)
T ss_dssp TTTTSSCCCCCCSCCCCEEEEEEECSEEC---TTSS------------------------SCEECSCCTTCEEEECCCSS
T ss_pred cccceEEeCcccccCCcccEEEEEcCcee---cCCC------------------------CEEecccCCCCEEEECCccC
Confidence 34789999854322334444443 66653 3333 24556799999999999776
Q ss_pred EEEEcCCCCcEEEE
Q 039441 444 IALVASPNEKLLTV 457 (539)
Q Consensus 444 h~i~n~gne~l~~v 457 (539)
-.-+..+++...++
T Consensus 73 Gtevk~dgeey~i~ 86 (97)
T 1pcq_O 73 VKSEKIDNEEVLIM 86 (97)
T ss_dssp CEEEEETTEEEEEE
T ss_pred CeEEEECCEEEEEE
Confidence 65555544444433
No 297
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=70.33 E-value=8.7 Score=34.80 Aligned_cols=51 Identities=8% Similarity=0.015 Sum_probs=41.7
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVIS 254 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~~ 254 (539)
...+..++.++...-..++.++||++|.+.+...++++.+ ...+.+||++-
T Consensus 23 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 75 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFG 75 (216)
T ss_dssp EEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEEC
T ss_pred eEEEeCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 3455699998888877889999999999999999887664 56788999873
No 298
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=70.16 E-value=8.2 Score=35.68 Aligned_cols=51 Identities=12% Similarity=0.121 Sum_probs=41.9
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVIS 254 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~~ 254 (539)
.+.+..++.++...--.++.++||++|.+.+...++++.+ ...+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 87 (237)
T 3fx3_A 35 VWRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFG 87 (237)
T ss_dssp EEEEECTTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEEC
T ss_pred EEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEec
Confidence 4455699999888878889999999999999999887664 56788999873
No 299
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=69.92 E-value=26 Score=33.48 Aligned_cols=83 Identities=20% Similarity=0.247 Sum_probs=55.0
Q ss_pred eCCCe-eecccccCCCcEEEEEeceEEEEEEeCCCce-ee----ecCCCc--EEEeCCCCeEEEEecCCCce---EEEEE
Q 039441 208 ANPST-LVVPHHSDAETILVLLKGKGVITLVSHERRE-SF----NMEHGD--VISVPAGTTYYLSNQDNVDR---LHVAK 276 (539)
Q Consensus 208 l~P~~-l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~-~~----~v~~GD--V~~iPaG~~h~i~N~g~~e~---L~iv~ 276 (539)
|.++. +---|-.+|++|-|-..|.+.+-++.+++.. +. +|..|. .++||+|+.+--....++.. .-|=+
T Consensus 86 L~~~~~~S~wHRv~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~~~~~tLVgC 165 (203)
T 1xe7_A 86 LTPDSPIGKFHKNINRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEEFDNGFLISE 165 (203)
T ss_dssp EBTTBCEEEEEEESSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTTTTTCEEEEE
T ss_pred EcCCCCcccceeeCCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCCCcccceEEEE
Confidence 46666 4555557999999999999888788887643 22 556676 38999999887765522222 33445
Q ss_pred EeccCCCCCCceec
Q 039441 277 LLQPVNTPGQFRVQ 290 (539)
Q Consensus 277 l~d~~n~pg~f~~~ 290 (539)
..-|+-....|++.
T Consensus 166 tVaPGFdF~dFel~ 179 (203)
T 1xe7_A 166 VVVPGFDFEDHTFL 179 (203)
T ss_dssp EESSCCCGGGEEEC
T ss_pred EecCCccchhcEec
Confidence 55555555566654
No 300
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=69.77 E-value=9.5 Score=34.29 Aligned_cols=49 Identities=18% Similarity=0.284 Sum_probs=39.3
Q ss_pred EeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEE
Q 039441 205 ILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVI 253 (539)
Q Consensus 205 il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~ 253 (539)
+.+..++.++...--.++.++||++|.+.+...++++.+ ...+.+||++
T Consensus 15 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~ 65 (207)
T 2oz6_A 15 RRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFF 65 (207)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred eEEECCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCc
Confidence 344588888887777888999999999999998876553 4567888877
No 301
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=69.67 E-value=8.1 Score=34.79 Aligned_cols=46 Identities=15% Similarity=0.089 Sum_probs=36.6
Q ss_pred eCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEE
Q 039441 208 ANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVI 253 (539)
Q Consensus 208 l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~ 253 (539)
..++.++...-..++.++||++|.+.+...++++.+ ...+.+||++
T Consensus 4 ~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 51 (195)
T 3b02_A 4 FARKETIYLRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYF 51 (195)
T ss_dssp ECTTCEEECTTSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred cCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEe
Confidence 477777776666788899999999999998877654 4677888887
No 302
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=68.58 E-value=22 Score=32.49 Aligned_cols=61 Identities=18% Similarity=0.298 Sum_probs=44.8
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEEEeCCCCeEEEEec
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVISVPAGTTYYLSNQ 266 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~~iPaG~~h~i~N~ 266 (539)
..+.+..++.++...-..++.++||++|.+.+. +.+++.+ ...+.+||++- .-..+++...
T Consensus 23 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~ 85 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC--MHSGCLVEAT 85 (222)
T ss_dssp CEEEEECTTCEEECTTCCCCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE--SCSSCEEEES
T ss_pred CcEEEECCCCEEECCCCCCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec--CCCCEEEEEc
Confidence 344556999988877778889999999999995 6666554 56789999987 3334444444
No 303
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=68.19 E-value=38 Score=33.89 Aligned_cols=96 Identities=16% Similarity=0.231 Sum_probs=57.9
Q ss_pred eeeEEEeeeCCCe-eecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 200 NYRLAILEANPST-LVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 200 ~~Rl~il~l~P~~-l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
...+.-++|+|++ +.+|--.+-..++||++|.+.|+ +......+.++.++++.+|...-|.|.. .++.+++++.
T Consensus 168 ~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~----g~~~~~~~~~~~~~~l~~gd~~~i~~~a-~~~a~~LLl~ 242 (290)
T 1j1l_A 168 PTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG----PDDAQQKIEPHHTAVLGEGDSVQVENKD-PKRSHFVLIA 242 (290)
T ss_dssp CEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES----CTTSCEEECTTEEEEECSCSEEEEECCS-SSCEEEEEEE
T ss_pred CcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC----CcccceeccCceEEEecCCCEEEEEEcC-CCCcEEEEEE
Confidence 3445556679987 43554445578999999998773 2222245677888888888888888742 2345544433
Q ss_pred -ccCCCCCCceeccccCccEEEcChhhhh
Q 039441 279 -QPVNTPGQFRVQQRQQGTIKRASQEQLK 306 (539)
Q Consensus 279 -d~~n~pg~f~~~~q~~G~Ivrv~~eql~ 306 (539)
.|.+.|- -.-|.+|--+++.|.
T Consensus 243 G~Pl~epi------~~~gpFVmnt~eeI~ 265 (290)
T 1j1l_A 243 GEPLREPV------IQHGPFVMNTNEEIS 265 (290)
T ss_dssp ECCCCSCC------EEETTEEESSHHHHH
T ss_pred cccCCCCE------EecCCeeeCCHHHHH
Confidence 3444431 123556666666554
No 304
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=68.16 E-value=10 Score=34.25 Aligned_cols=51 Identities=12% Similarity=0.176 Sum_probs=42.4
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEE
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVI 253 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~ 253 (539)
..+.+..++.++...--.++.++||++|.+.+....+++.+ ...+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 44556699999988878889999999999999999887754 5678999987
No 305
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=68.13 E-value=9.7 Score=34.31 Aligned_cols=50 Identities=22% Similarity=0.360 Sum_probs=40.3
Q ss_pred EeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEEE
Q 039441 205 ILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVIS 254 (539)
Q Consensus 205 il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~~ 254 (539)
+.+..++.++...-..++.++||++|.+.+...++++.+ ...+.+||++-
T Consensus 21 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 21 IHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 72 (210)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred EEEeCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 344589998888877889999999999999999877654 45678888873
No 306
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=66.49 E-value=12 Score=34.15 Aligned_cols=51 Identities=18% Similarity=0.130 Sum_probs=41.4
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVIS 254 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~~ 254 (539)
.+.+..++.++...--.++.++||++|.+.+...++++.+ ...+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 3455699999888877889999999999999999887654 45678888873
No 307
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=66.44 E-value=12 Score=33.83 Aligned_cols=50 Identities=18% Similarity=0.242 Sum_probs=41.6
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVI 253 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~ 253 (539)
.+.+..++.++...--.++.++||++|...+...++++.+ ...+.+||++
T Consensus 27 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 78 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMC 78 (220)
T ss_dssp EEEEECTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred ceEEeCCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCee
Confidence 3455699999988888889999999999999999887664 4677899985
No 308
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=66.39 E-value=11 Score=35.25 Aligned_cols=50 Identities=18% Similarity=0.173 Sum_probs=41.2
Q ss_pred EeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEEE
Q 039441 205 ILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVIS 254 (539)
Q Consensus 205 il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~~ 254 (539)
+.+..++.++...--.++.++||++|.+.+...++++.+ ...+.+||++-
T Consensus 45 ~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G 96 (243)
T 3la7_A 45 VETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFG 96 (243)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEES
T ss_pred eEEECCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEc
Confidence 344589999888878889999999999999999887664 46688999873
No 309
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=66.29 E-value=79 Score=28.89 Aligned_cols=79 Identities=18% Similarity=0.133 Sum_probs=50.5
Q ss_pred CCCeeeccccc-CCCcEEEEEece-EEEEEEeCCCc-ee----eecCCCcE--EEeCCCCeEEEEecCCCceEEEEEEec
Q 039441 209 NPSTLVVPHHS-DAETILVLLKGK-GVITLVSHERR-ES----FNMEHGDV--ISVPAGTTYYLSNQDNVDRLHVAKLLQ 279 (539)
Q Consensus 209 ~P~~l~lPh~~-dA~~~~yV~~G~-g~i~~v~pg~~-~~----~~v~~GDV--~~iPaG~~h~i~N~g~~e~L~iv~l~d 279 (539)
.++.+---|=. +|++|-|-..|. -.|.++.+++. ++ -+|..|.+ ++||+|+.+--...| ...-|=+..-
T Consensus 48 ~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~g--~~~LVsCtVa 125 (154)
T 1znp_A 48 EKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGERPQVIVPANCWQSAESLG--DFTLVGCTVS 125 (154)
T ss_dssp ESSCCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTEESEEEECTTCEEEEEESS--SEEEEEEEES
T ss_pred cCCCCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCcccEEEEcCCEEEEeeECC--CeEEEEEEec
Confidence 56665555556 899999999997 56667777653 22 26677875 899999988776654 2222334444
Q ss_pred cCCCCCCcee
Q 039441 280 PVNTPGQFRV 289 (539)
Q Consensus 280 ~~n~pg~f~~ 289 (539)
|+-....|++
T Consensus 126 PGF~f~dFel 135 (154)
T 1znp_A 126 PGFAFSSFVM 135 (154)
T ss_dssp SCCCGGGEEE
T ss_pred CCCcccccEe
Confidence 4443444444
No 310
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=66.14 E-value=63 Score=31.71 Aligned_cols=93 Identities=17% Similarity=0.145 Sum_probs=62.0
Q ss_pred eeEEEEEEcCCceecceecCCCCEEEEEEec-eEEEEEecCCCCcc-chhh----hhhhhHHHHHHhhhcceeeE----E
Q 039441 358 AGVTYVEINQGGMMVPHYNSKATTIVLVVEG-RGRFEMGGPLSSRW-SQES----QREQQEEEEEEESSRELQKI----S 427 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhpnA~ei~yV~~G-~g~v~vV~p~gs~~-s~~~----~~g~~~~~~~e~~~~~y~~~----~ 427 (539)
.+.-.+.+.+|=..+.|+|+.-.|=++..-| ...|.+..++.... .... -.|. . +.+ .
T Consensus 106 YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~---------~---~~~~aG~~ 173 (246)
T 3kmh_A 106 YAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGC---------R---QKHTAGSQ 173 (246)
T ss_dssp EEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTE---------E---EEECTTCE
T ss_pred ceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCe---------E---EEeCCCCE
Confidence 7778889999999999999998888888777 66677766653210 0000 0000 0 011 1
Q ss_pred eeeCCCcEEEeCCCCeEEEEcCCCCc-EEEEEEeec
Q 039441 428 ANLSPGVVFIIPPGHPIALVASPNEK-LLTVGFSLN 462 (539)
Q Consensus 428 ~~L~~GDV~vVPaG~~h~i~n~gne~-l~~v~F~~n 462 (539)
-.|.||+-+-||+|.-|++.+.+..+ +.+-.|.+.
T Consensus 174 i~L~PGESiTl~Pg~~H~F~ae~g~G~vligEVSt~ 209 (246)
T 3kmh_A 174 LRLSPGESICLPPGLYHSFWAEAGFGDVLVGEVSSV 209 (246)
T ss_dssp EEECTTCEEEECTTEEEEEEECTTSCCEEEEEEEEC
T ss_pred EEECCCCeEecCCCCEEEEEecCCCccEEEEEcccC
Confidence 26899999999999999999975433 444445433
No 311
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=65.85 E-value=10 Score=34.17 Aligned_cols=48 Identities=10% Similarity=0.104 Sum_probs=38.0
Q ss_pred eeCCCeeecccccCC--CcEEEEEeceEEEEEEeCCCce--eeecCCCcEEE
Q 039441 207 EANPSTLVVPHHSDA--ETILVLLKGKGVITLVSHERRE--SFNMEHGDVIS 254 (539)
Q Consensus 207 ~l~P~~l~lPh~~dA--~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~~ 254 (539)
+.+++.++...--.+ +.++||++|...+...++++.+ ...+.+||++-
T Consensus 9 ~~~~g~~i~~~g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 60 (202)
T 2zcw_A 9 SFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFG 60 (202)
T ss_dssp EECTTCEEECSBSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred EECCCCEEECCCCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEee
Confidence 447888777766667 8899999999999998877654 46778899873
No 312
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=65.48 E-value=29 Score=31.56 Aligned_cols=62 Identities=11% Similarity=0.269 Sum_probs=45.9
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEEEeCCCCeEEEEecC
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVISVPAGTTYYLSNQD 267 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~~iPaG~~h~i~N~g 267 (539)
..+.+..++.++...-..++.++||++|.+.+ ...+++.+ ...+.+||++-.| ..+.+....
T Consensus 27 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~-~~~~~G~~~~~~~~~~G~~~G~~--~~~~~~A~~ 90 (220)
T 2fmy_A 27 FREQRYSKKAILYTPNTERNLVFLVKSGRVRV-YLAYEDKEFTLAILEAGDIFCTH--TRAFIQAME 90 (220)
T ss_dssp SEEEEECTTCEEECTTCSSCEEEEEEESEEEE-EEECSSCEEEEEEEETTCEEESC--SSSEEEESS
T ss_pred hheeEeCCCCEEECCCCCCCeEEEEEecEEEE-EECCCCCEEEEEEcCCCCEeCCc--cceEEEEcC
Confidence 34556699998887777888999999999999 56666554 5678999998773 344555543
No 313
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=65.34 E-value=13 Score=34.77 Aligned_cols=52 Identities=13% Similarity=0.224 Sum_probs=42.9
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEEE
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVIS 254 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~~ 254 (539)
..+.+..++.++...--.++.++||++|.+.+...++++.+ ...+.+||++-
T Consensus 32 ~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 85 (250)
T 3e6c_C 32 GLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIG 85 (250)
T ss_dssp SEEEEECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CeEEEECCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 34455699999988888889999999999999999887665 46789999884
No 314
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=65.15 E-value=26 Score=32.72 Aligned_cols=79 Identities=15% Similarity=0.149 Sum_probs=55.2
Q ss_pred eCCCeeecccccCCCcEEEEEeceE-EEEEEeCCCce-e----eecCCCc---EEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 208 ANPSTLVVPHHSDAETILVLLKGKG-VITLVSHERRE-S----FNMEHGD---VISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 208 l~P~~l~lPh~~dA~~~~yV~~G~g-~i~~v~pg~~~-~----~~v~~GD---V~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
|.++.+---|-.+++++.|-..|.. .+.++.+++.. + .+|..|+ .++||+|+.+--.- | ...-|=+..
T Consensus 60 L~~~~~S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~-~--~~~LVsctV 136 (172)
T 3loi_A 60 MQAGQPDPFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLEHPEARHQVVVPRRVWFAQEV-D--GYCLASVLV 136 (172)
T ss_dssp EETTCCEEEEECSSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTTSTTCBSEEEECTTCEEEEEE-S--SEEEEEEEE
T ss_pred EcCCCCccCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcccCCcceEEEECCCEEEEEEe-C--CcEEEEEEE
Confidence 4677755556679999999999986 78999988653 2 2677898 78999999776666 3 333344444
Q ss_pred ccCCCCCCcee
Q 039441 279 QPVNTPGQFRV 289 (539)
Q Consensus 279 d~~n~pg~f~~ 289 (539)
-|+-....|.+
T Consensus 137 aPGF~f~dfel 147 (172)
T 3loi_A 137 APGFDFKDFSL 147 (172)
T ss_dssp ESCCCGGGCEE
T ss_pred cCCccchhcEE
Confidence 55555556665
No 315
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=65.00 E-value=25 Score=31.71 Aligned_cols=125 Identities=11% Similarity=0.060 Sum_probs=79.2
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe-
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII- 438 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV- 438 (539)
+....+.+|.++...= -.++.+.+|++|..++....++|. ......+.+||++.+
T Consensus 26 ~~~~~~~~g~~i~~~G-~~~~~~y~i~~G~v~~~~~~~~G~-----------------------~~~~~~~~~G~~~~~g 81 (220)
T 3dv8_A 26 LITQHVKKGTIIHNGN-MDCTGLLLVKSGQLRTYILSDEGR-----------------------EITLYRLFDMDMCLLS 81 (220)
T ss_dssp CEEEEECTTCEEEEGG-GCCCEEEEEEESCEEEEEECTTSC-----------------------EEEEEEECTTCEESGG
T ss_pred CceEEeCCCCEEECCC-CCcceEEEEEeceEEEEEECCCCC-----------------------EEEEEecCCCCeeehh
Confidence 4678888888874443 357899999999999999998863 245577899999632
Q ss_pred ------CCCCeEEEEcCCCCcEEEEEEeecC------CCCccc-----ccccc---------------------------
Q 039441 439 ------PPGHPIALVASPNEKLLTVGFSLNA------RNNQRN-----FLAGK--------------------------- 474 (539)
Q Consensus 439 ------PaG~~h~i~n~gne~l~~v~F~~na------~n~~~~-----fLAG~--------------------------- 474 (539)
..-+++.+.+..+ ..++.+.... .++... .++-+
T Consensus 82 ~~~~~~~~~~~~~~~a~~~--~~~~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~ 159 (220)
T 3dv8_A 82 ASCIMRSIQFEVTIEAEKD--TDLWIIPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEE 159 (220)
T ss_dssp GGGGCTTCCCCCEEEESSC--EEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHhCCCCCceEEEEeee--eEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 2345666777644 5555544322 111100 00000
Q ss_pred ----chhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeE
Q 039441 475 ----INIMNQVERETMEVAFNVPARLIERVFGTNPKESYF 510 (539)
Q Consensus 475 ----~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~f 510 (539)
..+.-.++.+-||..+|++.+++.++++.-.+.++|
T Consensus 160 ~~~~~~~~~~~t~~~lA~~lg~sr~tvsR~l~~L~~~g~I 199 (220)
T 3dv8_A 160 TSIEGTNELKITHETIANHLGSHREVITRMLRYFQVEGLV 199 (220)
T ss_dssp HHHHTSSEECCCHHHHHHHHTCCHHHHHHHHHHHHHTTSE
T ss_pred hhhcCCceecCCHHHHHHHhCCCHHHHHHHHHHHHHCCCE
Confidence 011125788999999999999999888654333233
No 316
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=64.93 E-value=13 Score=34.07 Aligned_cols=49 Identities=16% Similarity=0.206 Sum_probs=39.8
Q ss_pred EeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEE
Q 039441 205 ILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVI 253 (539)
Q Consensus 205 il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~ 253 (539)
+.+..++.++...--.++.++||++|.+.+...++++.+ ...+.+||++
T Consensus 31 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 81 (227)
T 3d0s_A 31 PVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMF 81 (227)
T ss_dssp EEEECTTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred EEEeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEE
Confidence 344589998888777889999999999999999876654 4577888887
No 317
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=64.89 E-value=24 Score=32.92 Aligned_cols=119 Identities=15% Similarity=0.145 Sum_probs=78.2
Q ss_pred eEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe
Q 039441 359 GVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII 438 (539)
Q Consensus 359 sva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV 438 (539)
.+....+.+|.++..-- -.++.+.||++|..++....++|. ..+...+.+||+|-.
T Consensus 31 ~~~~~~~~~g~~i~~~G-~~~~~~y~i~~G~v~~~~~~~~G~-----------------------~~~~~~~~~G~~~G~ 86 (250)
T 3e6c_C 31 MGLIRDFAKGSAVIMPG-EEITSMIFLVEGKIKLDIIFEDGS-----------------------EKLLYYAGGNSLIGK 86 (250)
T ss_dssp GSEEEEECTTCEEECTT-CCCCSEEEEEESCEEEEEECTTSC-----------------------EEEEEEECTTCEECC
T ss_pred hCeEEEECCCCEEECCC-CCCCeEEEEEeeEEEEEEECCCCC-----------------------EEEEEEecCCCEEee
Confidence 36678888888874433 357889999999999999988873 245578999999842
Q ss_pred ---CCCCeEEEEcCCCCcEEEEEEeecC------CCCcc--------------------------------ccc---c--
Q 039441 439 ---PPGHPIALVASPNEKLLTVGFSLNA------RNNQR--------------------------------NFL---A-- 472 (539)
Q Consensus 439 ---PaG~~h~i~n~gne~l~~v~F~~na------~n~~~--------------------------------~fL---A-- 472 (539)
.. +++.+.+..+ ..++.+.... .++.. .+| +
T Consensus 87 ~l~~~-~~~~~~A~~~--~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~ 163 (250)
T 3e6c_C 87 LYPTG-NNIYATAMEP--TRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSS 163 (250)
T ss_dssp CSCCS-CCEEEEESSS--EEEEEECHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred ecCCC-CceEEEEccc--EEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 34 6777777644 5555443221 11110 000 0
Q ss_pred -cc-----chhcccCcHHHHHHHcCCCHHHHHHhhcCC
Q 039441 473 -GK-----INIMNQVERETMEVAFNVPARLIERVFGTN 504 (539)
Q Consensus 473 -G~-----~svL~~~p~evLa~AF~vs~e~v~kL~~~q 504 (539)
|. ..+.-.++.+-||..+|++.++|.++++.=
T Consensus 164 ~~~~~~~~~~i~~~~t~~~iA~~lG~sr~tvsR~l~~L 201 (250)
T 3e6c_C 164 QGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLASL 201 (250)
T ss_dssp HCEEETTEEEEECCCCHHHHHHHHTCCHHHHHHHHHHH
T ss_pred hCCCCCCCcEecCCCCHHHHHHHhCCcHHHHHHHHHHH
Confidence 00 012235789999999999999998888653
No 318
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=64.39 E-value=8.8 Score=35.34 Aligned_cols=51 Identities=16% Similarity=0.119 Sum_probs=37.2
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEE
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVI 253 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~ 253 (539)
..+.+..|+.++...-..++.++||++|.+.+...++++.+ ...+.+||++
T Consensus 33 ~~~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 85 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFF 85 (232)
T ss_dssp CEEEEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEE
T ss_pred CeEEEECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 34455699998888778889999999999999988775543 5677888887
No 319
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=64.10 E-value=48 Score=32.98 Aligned_cols=95 Identities=11% Similarity=0.151 Sum_probs=55.7
Q ss_pred CCCceEEEeCCcccccccccceeEEEEEEcCCceecceecCCCCEE-EEEEeceEEEEEecCCCCccchhhhhhhhHHHH
Q 039441 337 NNFGRFFEATPKDYQQLQEIDAGVTYVEINQGGMMVPHYNSKATTI-VLVVEGRGRFEMGGPLSSRWSQESQREQQEEEE 415 (539)
Q Consensus 337 n~~G~i~~~~~~~fP~L~~l~isva~v~L~pGgm~~PHwhpnA~ei-~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~ 415 (539)
+..|.+..+++..-+ +.. +++..++|.+|....-.- ...|+ ++.+.|.+.|++-... +.-
T Consensus 11 ~~~g~~~~itp~~a~-~~y--~~f~~~~L~~Ge~~~~~~--~~~E~~iv~l~G~~~V~~~g~~---~~~----------- 71 (270)
T 2qjv_A 11 SESGNIQHISPQNAG-WEY--VGFDVWQLXAGESITLPS--DERERCLVLVAGLASVXAADSF---FYR----------- 71 (270)
T ss_dssp CSSEEEEEECHHHHT-SSS--CEEEEEEECTTCEEEECC--SSEEEEEEEEESCEEEEETTEE---EEE-----------
T ss_pred cCCCCEEEeCCCCCC-cEE--eEEEEEEecCCCEEEecC--CCcEEEEEEecceEEEEECCEE---Eec-----------
Confidence 346777777754322 222 778899999999876553 44455 4556788888773210 000
Q ss_pred HHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEE
Q 039441 416 EEESSRELQKISANLSPGVVFIIPPGHPIALVASPNEKLLTV 457 (539)
Q Consensus 416 ~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v 457 (539)
...+.-.+.=.+.|.++||.|..+.+.+.+ +++|.
T Consensus 72 -----~g~R~svF~~~~p~~lYvp~g~~v~i~a~~--~~~~~ 106 (270)
T 2qjv_A 72 -----IGQRMSPFERIPAYSVYLPHHTEAXVTAET--DLELA 106 (270)
T ss_dssp -----ECCCSSGGGCSCCCEEEECSSCCEEEEESS--SEEEE
T ss_pred -----cccccccccCCCCcEEEECCCCEEEEEecC--CceEE
Confidence 000000011112599999999988888875 35554
No 320
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=63.23 E-value=20 Score=32.09 Aligned_cols=75 Identities=11% Similarity=0.057 Sum_probs=51.1
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeC
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIP 439 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVP 439 (539)
+....+.+|.++...- -.++.+.+|++|..++....++|. ......+.+||+|-..
T Consensus 13 ~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~G~-----------------------~~~~~~~~~g~~~G~~ 68 (207)
T 2oz6_A 13 CHRRRYTAKSTIIYAG-DRCETLFFIIKGSVTILIEDDDGR-----------------------EMIIGYLNSGDFFGEL 68 (207)
T ss_dssp SEEEEECTTCEEECTT-SBCCEEEEEEESEEEEEEECTTSC-----------------------EEEEEEEETTCEESCT
T ss_pred cceEEECCCCEEEcCC-CCCCeEEEEEeCEEEEEEECCCCC-----------------------EEEEEEcCCCCCcccH
Confidence 4567788888764322 257789999999999999988763 2455778999998432
Q ss_pred -----C----CCeEEEEcCCCCcEEEEEEe
Q 039441 440 -----P----GHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 440 -----a----G~~h~i~n~gne~l~~v~F~ 460 (539)
. -+++.+.+..+ ..++.+.
T Consensus 69 ~~~~~~~~~~~~~~~~~A~~~--~~v~~i~ 96 (207)
T 2oz6_A 69 GLFEKEGSEQERSAWVRAKVE--CEVAEIS 96 (207)
T ss_dssp TTCC-----CBCCSEEEESSC--EEEEEEE
T ss_pred HHhcCCCCCCCcceEEEECCc--EEEEEEC
Confidence 2 24556677644 5555444
No 321
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=63.22 E-value=13 Score=32.19 Aligned_cols=49 Identities=12% Similarity=0.055 Sum_probs=38.2
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCc--eeeecCCCcEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERR--ESFNMEHGDVI 253 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~--~~~~v~~GDV~ 253 (539)
...+..++.++.-.--.++.+++|++|.+.+.. .+++. ....+.+||++
T Consensus 62 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 62 FEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp EEEEECTTCEEECTTSCCCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEE
T ss_pred ceeEeCCCCEEEeCCCCCcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEe
Confidence 345568999988888889999999999999998 54443 24567888876
No 322
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=63.04 E-value=10 Score=34.86 Aligned_cols=51 Identities=22% Similarity=0.260 Sum_probs=40.4
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEE
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVI 253 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~ 253 (539)
..+.+..++.++...--.++.++||++|.+.+....+++.+ ...+.+||++
T Consensus 29 ~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 81 (231)
T 3e97_A 29 VTERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVV 81 (231)
T ss_dssp EEEEEECTTCBCCCTTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEE
T ss_pred cEEEEECCCCEEEeCCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEE
Confidence 34556699999888878889999999999999999877654 4678888887
No 323
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=62.99 E-value=1.1e+02 Score=31.95 Aligned_cols=58 Identities=16% Similarity=0.213 Sum_probs=38.6
Q ss_pred cCCCcEEEEEe-c-eEEEEEEeCCCce-eeecCCCc-EEEeCCCCeEEEEecCCCceEEEEEE
Q 039441 219 SDAETILVLLK-G-KGVITLVSHERRE-SFNMEHGD-VISVPAGTTYYLSNQDNVDRLHVAKL 277 (539)
Q Consensus 219 ~dA~~~~yV~~-G-~g~i~~v~pg~~~-~~~v~~GD-V~~iPaG~~h~i~N~g~~e~L~iv~l 277 (539)
+....++||.. + ...|++|+..... ...|.-|. +...|.|...|+.+.++ ..+.++.+
T Consensus 185 spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~d-G~~~~V~~ 246 (426)
T 3c75_H 185 TPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRD-GSLARVDF 246 (426)
T ss_dssp CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETT-SSEEEEEC
T ss_pred cCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCC-CCEEEEEC
Confidence 45567999986 3 6899999987543 34444433 45678888888888774 44544443
No 324
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=62.57 E-value=28 Score=33.08 Aligned_cols=66 Identities=14% Similarity=0.071 Sum_probs=44.5
Q ss_pred eCCCeeecccccCCCc---EEEEEe--ceEEEEEEeCCC------------------c-eeeecCCCcEEEeCCCCeEEE
Q 039441 208 ANPSTLVVPHHSDAET---ILVLLK--GKGVITLVSHER------------------R-ESFNMEHGDVISVPAGTTYYL 263 (539)
Q Consensus 208 l~P~~l~lPh~~dA~~---~~yV~~--G~g~i~~v~pg~------------------~-~~~~v~~GDV~~iPaG~~h~i 263 (539)
..|+++..+|.+.... ++||-- +.|.+.+.+|.. . .....++||+|.||+-..|.+
T Consensus 110 ~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~l~H~V 189 (216)
T 2rg4_A 110 LPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWLRHEV 189 (216)
T ss_dssp ECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETTSCEEE
T ss_pred cCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCCCEEec
Confidence 5889999999664444 446554 346777777631 1 134678999999999999999
Q ss_pred Ee-cCCCceEE
Q 039441 264 SN-QDNVDRLH 273 (539)
Q Consensus 264 ~N-~g~~e~L~ 273 (539)
.= .++.+++.
T Consensus 190 ~p~~~~~~RiS 200 (216)
T 2rg4_A 190 PMNMAEEDRIS 200 (216)
T ss_dssp CCCCSSSCEEE
T ss_pred cCCCCCCCEEE
Confidence 84 44334443
No 325
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=61.88 E-value=16 Score=31.49 Aligned_cols=48 Identities=8% Similarity=0.149 Sum_probs=37.5
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEE
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVI 253 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~ 253 (539)
+...+..++.++.-.-..++.++||++|.+.+.. ++.....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~---~~~~~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV---NNEWATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEESCEEEEE---TTEEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCCCCCeEEEEEecEEEEEE---CCEEEEEecCCCEe
Confidence 3445669999998887888999999999998876 34456667888876
No 326
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=61.79 E-value=17 Score=30.49 Aligned_cols=75 Identities=12% Similarity=0.178 Sum_probs=49.8
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeC
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIP 439 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVP 439 (539)
+....+.+|.++...= -.++.+.+|++|...+....++|. ......+.+||+|-..
T Consensus 28 ~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~g~-----------------------~~~~~~~~~g~~~G~~ 83 (149)
T 2pqq_A 28 MSEVTLARGDTLFHEG-DPGDRLYVVTEGKVKLHRTSPDGR-----------------------ENMLAVVGPSELIGEL 83 (149)
T ss_dssp CEEEEECTTCEEECTT-SEECEEEEEEESCEEEEEECTTSS-----------------------EEEEEEECTTCEESGG
T ss_pred ceEEEeCCCCEEECCC-CCCCeEEEEEecEEEEEEECCCCc-----------------------EEEEEEcCCcCEechH
Confidence 5678888988874432 246789999999999999888763 2455789999987432
Q ss_pred C-----CCeEEEEcCCCCcEEEEEEe
Q 039441 440 P-----GHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 440 a-----G~~h~i~n~gne~l~~v~F~ 460 (539)
. -+++.+.+.. +..++.+.
T Consensus 84 ~~~~~~~~~~~~~a~~--~~~~~~i~ 107 (149)
T 2pqq_A 84 SLFDPGPRTATGTALT--EVKLLALG 107 (149)
T ss_dssp GGTSCEECSSEEEESS--CEEEEEEE
T ss_pred HhcCCCCcceEEEEcc--ceEEEEEe
Confidence 1 2334445543 35555443
No 327
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=61.40 E-value=11 Score=34.92 Aligned_cols=51 Identities=18% Similarity=0.196 Sum_probs=41.0
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEE
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVI 253 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~ 253 (539)
..+.+..++.++...--.++.++||++|.+.+...++++.+ ...+.+||++
T Consensus 43 ~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~f 95 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLI 95 (232)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEE
T ss_pred cEEEEECCCCEEECCCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCee
Confidence 44555699999888777889999999999999988876543 4567889887
No 328
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=61.18 E-value=24 Score=30.65 Aligned_cols=46 Identities=13% Similarity=0.307 Sum_probs=40.5
Q ss_pred cCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEec
Q 039441 219 SDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQ 266 (539)
Q Consensus 219 ~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~ 266 (539)
.+++++.=|+.|...|-+ ||..+-..+..|+-+.|||.+-|-|.-.
T Consensus 55 T~~~E~MevvsG~l~V~L--pg~~eW~~~~aGesF~VpanssF~lkv~ 100 (111)
T 3hqx_A 55 THVPERMEIISGECRVKI--ADSTESELFRAGQSFYVPGNSLFKIETD 100 (111)
T ss_dssp CSSCEEEEEEESEEEEEE--TTCSSCEEEETTCEEEECTTCEEEEECS
T ss_pred CCCcEEEEEEEeEEEEEc--CCcccCEEeCCCCEEEECCCCcEEEEEC
Confidence 689999999999987665 8888888999999999999999888765
No 329
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=60.90 E-value=86 Score=30.41 Aligned_cols=83 Identities=14% Similarity=0.212 Sum_probs=55.6
Q ss_pred eeCCCeeecccccCCCcEEEEEeceE-EEEEEeCCC----------------------------c-eee----ecCCCc-
Q 039441 207 EANPSTLVVPHHSDAETILVLLKGKG-VITLVSHER----------------------------R-ESF----NMEHGD- 251 (539)
Q Consensus 207 ~l~P~~l~lPh~~dA~~~~yV~~G~g-~i~~v~pg~----------------------------~-~~~----~v~~GD- 251 (539)
=|.|+.+---|-.+++++.+-..|.. .|-++.+++ . ++. +|..|.
T Consensus 66 LL~~g~~S~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~ 145 (225)
T 3m3i_A 66 LCTPESPSHLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQPPAAPQAETDTADARPKYQVYRRVLVGARVERGEL 145 (225)
T ss_dssp EECSSSCEEEEECSSEEEEEEEEESCEEEEEEESSSTTTTC------------------CCSSCEEEEEEESSCGGGTCB
T ss_pred EecCCCCcccEEecCCEEEEEECCCCEEEEEEcCCCcccccccccccccccccccccccccccCceEEEEeCCCccCCce
Confidence 34777765555579999999999996 677888776 1 222 456677
Q ss_pred -EEEeCCCCeEEEEecCCC-----ceEEEEEEeccCCCCCCcee
Q 039441 252 -VISVPAGTTYYLSNQDNV-----DRLHVAKLLQPVNTPGQFRV 289 (539)
Q Consensus 252 -V~~iPaG~~h~i~N~g~~-----e~L~iv~l~d~~n~pg~f~~ 289 (539)
.++||+|+.+-..-.+++ ...-|=+..-|+.....|.+
T Consensus 146 pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCtVaPGFdF~DFel 189 (225)
T 3m3i_A 146 LQYTVPGGAIFGSSVAADGADGQAGYSLVSCIVSPGFDYRDFEI 189 (225)
T ss_dssp SEEEECTTCEEEEECCSSSTTCSSSCEEEEEEEESCCCGGGCEE
T ss_pred eEEEeCCCEEEEEEECCCCcCcCCCeEEEEEEEcCCccchhcEe
Confidence 579999998877766532 33444445555555556665
No 330
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=60.62 E-value=14 Score=33.40 Aligned_cols=48 Identities=10% Similarity=0.193 Sum_probs=37.4
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVI 253 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~ 253 (539)
......|+.++.-.--.++.++||++|.+.+.. +++.....+.+||++
T Consensus 95 ~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~~--~~g~~~~~l~~G~~f 142 (198)
T 2ptm_A 95 EFEVFQPADYVIQEGTFGDRMFFIQQGIVDIIM--SDGVIATSLSDGSYF 142 (198)
T ss_dssp EEEEECTTCEEECTTSCCSEEEEEEECCEEEEC--TTSCEEEEECTTCEE
T ss_pred cceeeCCCCEEEECCCcCcEEEEEEeCEEEEEe--cCCeEEEEecCCCEe
Confidence 344558999888777778889999999998875 555566778888877
No 331
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=60.61 E-value=28 Score=31.58 Aligned_cols=122 Identities=14% Similarity=0.135 Sum_probs=77.2
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeC
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIP 439 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVP 439 (539)
+....+.+|.++.--- -.++.+.||++|..++ ...++|. ......+.+||+|-.
T Consensus 27 ~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~-~~~~~G~-----------------------~~~~~~~~~G~~~G~- 80 (220)
T 2fmy_A 27 FREQRYSKKAILYTPN-TERNLVFLVKSGRVRV-YLAYEDK-----------------------EFTLAILEAGDIFCT- 80 (220)
T ss_dssp SEEEEECTTCEEECTT-CSSCEEEEEEESEEEE-EEECSSC-----------------------EEEEEEEETTCEEES-
T ss_pred hheeEeCCCCEEECCC-CCCCeEEEEEecEEEE-EECCCCC-----------------------EEEEEEcCCCCEeCC-
Confidence 5677888888864322 2478899999999999 5777653 245577899999987
Q ss_pred CCCeEEEEcCCCCcEEEEEEeecC------CCCcc--------------------------------ccc---c---cc-
Q 039441 440 PGHPIALVASPNEKLLTVGFSLNA------RNNQR--------------------------------NFL---A---GK- 474 (539)
Q Consensus 440 aG~~h~i~n~gne~l~~v~F~~na------~n~~~--------------------------------~fL---A---G~- 474 (539)
.+++.+.+..+ ..++.+.... .++.. .+| + |.
T Consensus 81 -~~~~~~~A~~~--~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~ 157 (220)
T 2fmy_A 81 -HTRAFIQAMED--TTILYTDIRNFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLK 157 (220)
T ss_dssp -CSSSEEEESSS--EEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEE
T ss_pred -ccceEEEEcCc--EEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCC
Confidence 45566677644 5555544221 12110 000 0 00
Q ss_pred ----chhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeE
Q 039441 475 ----INIMNQVERETMEVAFNVPARLIERVFGTNPKESYF 510 (539)
Q Consensus 475 ----~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~f 510 (539)
..+.-.++.+-||..+|++.+++.++++.-.+.++|
T Consensus 158 ~~~~~~~~~~~t~~~lA~~lg~sr~tvsR~l~~l~~~g~I 197 (220)
T 2fmy_A 158 VPQGIKLELGLNTEEIALMLGTTRQTVSVLLNDFKKMGIL 197 (220)
T ss_dssp ETTEEEEECSSCHHHHHHHHTSCHHHHHHHHHHHHHTTSE
T ss_pred CCCcEEEeccCCHHHHHHHhCCcHHHHHHHHHHHHHCCCE
Confidence 012335789999999999999998888654333344
No 332
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=60.59 E-value=22 Score=31.93 Aligned_cols=75 Identities=13% Similarity=0.047 Sum_probs=51.8
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeC
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIP 439 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVP 439 (539)
+....+.+|.++...= -.++.+.||++|..++....++|. ......+.+||+|-..
T Consensus 19 ~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~g~-----------------------~~~~~~~~~g~~~G~~ 74 (210)
T 3ryp_A 19 CHIHKYPSKSTLIHQG-EKAETLYYIVKGSVAVLIKDEEGK-----------------------EMILSYLNQGDFIGEL 74 (210)
T ss_dssp SEEEEECTTCEEECTT-SBCCEEEEEEESEEEEEEECTTCC-----------------------EEEEEEEETTCEESCT
T ss_pred cEEEEeCCCCEEECCC-CCCCeEEEEEeCEEEEEEECCCCC-----------------------EEEEEEcCCCCEeeeH
Confidence 4567788888764432 247889999999999999988763 2455778999998532
Q ss_pred -----C-CCeEEEEcCCCCcEEEEEEe
Q 039441 440 -----P-GHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 440 -----a-G~~h~i~n~gne~l~~v~F~ 460 (539)
. -+++.+.+..+ ..++.+.
T Consensus 75 ~~~~~~~~~~~~~~a~~~--~~v~~i~ 99 (210)
T 3ryp_A 75 GLFEEGQERSAWVRAKTA--CEVAEIS 99 (210)
T ss_dssp TTTSTTCBCSSEEEESSC--EEEEEEE
T ss_pred HHhcCCCCceEEEEECCc--EEEEEEc
Confidence 2 25566667644 5555544
No 333
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=60.14 E-value=5.1 Score=41.23 Aligned_cols=23 Identities=22% Similarity=0.332 Sum_probs=20.8
Q ss_pred ecCCCcEEEeCCCCeEEEEecCC
Q 039441 246 NMEHGDVISVPAGTTYYLSNQDN 268 (539)
Q Consensus 246 ~v~~GDV~~iPaG~~h~i~N~g~ 268 (539)
.=++||.|++++|+.||.+|.|=
T Consensus 282 ~QkpGd~Vi~~PgayH~v~n~G~ 304 (332)
T 2xxz_A 282 VQRPGDLVWINAGTVHWVQATGW 304 (332)
T ss_dssp EECTTCEEEECTTCEEEEEESSS
T ss_pred EECCCCEEEECCCceEEEEecce
Confidence 34899999999999999999984
No 334
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=59.54 E-value=16 Score=34.70 Aligned_cols=49 Identities=22% Similarity=0.365 Sum_probs=39.9
Q ss_pred EeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEE
Q 039441 205 ILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVI 253 (539)
Q Consensus 205 il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~ 253 (539)
+.+..++.++...--.++.++||++|.+.+...++++.+ ...+.+||++
T Consensus 71 ~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~ 121 (260)
T 3kcc_A 71 IHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFI 121 (260)
T ss_dssp EEEECTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEE
T ss_pred EEEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEE
Confidence 344589998887777789999999999999999877654 5667888887
No 335
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=57.90 E-value=21 Score=32.58 Aligned_cols=77 Identities=12% Similarity=0.161 Sum_probs=52.7
Q ss_pred eeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEE
Q 039441 358 AGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFI 437 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~v 437 (539)
-.+....+.+|.++.-.- -.++.+.+|++|..++....++|. ......+.+||+|-
T Consensus 20 ~~~~~~~~~~g~~i~~~G-~~~~~~y~v~~G~v~~~~~~~~G~-----------------------~~~~~~~~~G~~~G 75 (213)
T 1o5l_A 20 PCGKVIVFRKGEIVKHQD-DPIEDVLILLEGTLKTEHVSENGK-----------------------TLEIDEIKPVQIIA 75 (213)
T ss_dssp GGSEEEEECTTCEEECTT-CBCCEEEEEEESCEEEEEECTTSC-----------------------EEEEEEECSSEESS
T ss_pred cccEEEEECCCCEEEcCC-CccceEEEEEeeEEEEEEECCCCC-----------------------EEEEEEecCCCEee
Confidence 345677888888764432 246789999999999999988763 24557789999883
Q ss_pred e-----CC-CCeEEEEcCCCCcEEEEEEe
Q 039441 438 I-----PP-GHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 438 V-----Pa-G~~h~i~n~gne~l~~v~F~ 460 (539)
. .. .+++.+.+..+ ..++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~A~~~--~~v~~i~ 102 (213)
T 1o5l_A 76 SGFIFSSEPRFPVNVVAGEN--SKILSIP 102 (213)
T ss_dssp GGGTTSSSCBCSSEEEESSS--EEEEEEE
T ss_pred eHHHhcCCCCceEEEEEccc--eEEEEEe
Confidence 2 12 35666777644 5555443
No 336
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=57.43 E-value=19 Score=29.98 Aligned_cols=55 Identities=18% Similarity=0.295 Sum_probs=36.7
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeE---EeeeCCCcEE
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKI---SANLSPGVVF 436 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~---~~~L~~GDV~ 436 (539)
+....+.+|.++..-= -.++.+.||++|...+....++|. ... ...+.+||+|
T Consensus 29 ~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~g~-----------------------~~~~~~~~~~~~G~~f 84 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKEN-SKADNLMLLLEGGVELFYSNGGAG-----------------------SAANSTVCSVVPGAIF 84 (142)
T ss_dssp EEEEEECTTCEEECTT-SBCCEEEEEEESCEEEECC--------------------------------CEEEEECTTCEE
T ss_pred hcEEecCCCCEEEeCC-CCCCcEEEEEeCEEEEEEECCCCC-----------------------ceEeeeEEEecCCCEe
Confidence 6778888888764332 357899999999999988777652 123 4678999998
Q ss_pred Ee
Q 039441 437 II 438 (539)
Q Consensus 437 vV 438 (539)
-.
T Consensus 85 G~ 86 (142)
T 3mdp_A 85 GV 86 (142)
T ss_dssp CG
T ss_pred ch
Confidence 53
No 337
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=57.40 E-value=27 Score=31.81 Aligned_cols=116 Identities=12% Similarity=0.075 Sum_probs=74.5
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeC
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIP 439 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVP 439 (539)
+....+.+|.++...= -.++.+.||++|..++. ..++|. ......+.+||+|-
T Consensus 23 ~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~-~~~~G~-----------------------~~~~~~~~~G~~fG-- 75 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTGE-GDENGVFVVVDGRLRVY-LVGEER-----------------------EISLFYLTSGDMFC-- 75 (222)
T ss_dssp CEEEEECTTCEEECTT-CCCCCEEEEEESEEEEE-EEETTE-----------------------EEEEEEEETTCEEE--
T ss_pred CcEEEECCCCEEECCC-CCCCeEEEEEecEEEEE-ECCCCC-----------------------EEEEEEcCCCCEec--
Confidence 5677888888764322 24678999999999995 666652 24557789999998
Q ss_pred CCCeEEEEcCCCCcEEEEEEeecC------CCCccc--------------------------------cc---c---cc-
Q 039441 440 PGHPIALVASPNEKLLTVGFSLNA------RNNQRN--------------------------------FL---A---GK- 474 (539)
Q Consensus 440 aG~~h~i~n~gne~l~~v~F~~na------~n~~~~--------------------------------fL---A---G~- 474 (539)
..+++.+++..+ ..++.+.... .++... +| + |.
T Consensus 76 ~~~~~~~~A~~~--~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~ 153 (222)
T 1ft9_A 76 MHSGCLVEATER--TEVRFADIRTFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQ 153 (222)
T ss_dssp SCSSCEEEESSC--EEEEEECHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCBCCCSC
T ss_pred CCCCEEEEEccc--eEEEEEeHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCC
Confidence 556777777644 5555543221 111100 00 0 00
Q ss_pred ----chhcccCcHHHHHHHcCCCHHHHHHhhcCC
Q 039441 475 ----INIMNQVERETMEVAFNVPARLIERVFGTN 504 (539)
Q Consensus 475 ----~svL~~~p~evLa~AF~vs~e~v~kL~~~q 504 (539)
..+.-.++.+-||..+|++.+++.++++.-
T Consensus 154 ~~~~~~~~~~~t~~~lA~~lG~sr~tvsR~l~~L 187 (222)
T 1ft9_A 154 TQGGVIVSVDFTVEEIANLIGSSRQTTSTALNSL 187 (222)
T ss_dssp C--CCCCEECCCHHHHHHHHCSCHHHHHHHHHHH
T ss_pred CCCcEEEeccCCHHHHHHHhCCcHHHHHHHHHHH
Confidence 012234789999999999999988887653
No 338
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=56.62 E-value=18 Score=30.35 Aligned_cols=47 Identities=19% Similarity=0.205 Sum_probs=36.1
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVI 253 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~ 253 (539)
.+.+..++.++.-.--.++.+++|++|.+.+.. ++.....+.+||++
T Consensus 47 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~---~g~~~~~~~~G~~f 93 (139)
T 3ocp_A 47 YPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK---EGVKLCTMGPGKVF 93 (139)
T ss_dssp EEEEECSSCEEECTTSCCCEEEEEEECCEEEEE---TTEEEEEECTTCEE
T ss_pred EEEecCCCCEEEeCCCcCCEEEEEEeCEEEEEE---CCEEEEEeCCCCEe
Confidence 345568999888887889999999999998833 33456677888876
No 339
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=56.22 E-value=21 Score=30.41 Aligned_cols=47 Identities=13% Similarity=0.267 Sum_probs=36.6
Q ss_pred EeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEE
Q 039441 205 ILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVIS 254 (539)
Q Consensus 205 il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~ 254 (539)
..+..|+.++...--.++.++||++|.+.+.. .......+.+||++-
T Consensus 52 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~---~~~~~~~~~~G~~fG 98 (160)
T 4f8a_A 52 TVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQ---DDEVVAILGKGDVFG 98 (160)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEE---TTEEEEEEETTCEEE
T ss_pred eeeeCCCCEEEeCCCCccEEEEEEeeEEEEEE---CCEEEEEecCCCEeC
Confidence 34558999998888889999999999999865 334456677888774
No 340
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=56.00 E-value=27 Score=31.46 Aligned_cols=125 Identities=15% Similarity=0.092 Sum_probs=79.4
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe-
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII- 438 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV- 438 (539)
+....+.+|.++...= -.++.+.+|++|...+....++|. ......+.+||+|-.
T Consensus 22 ~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~g~-----------------------~~~~~~~~~g~~~G~~ 77 (216)
T 4ev0_A 22 FQRRLYPQGKPIFYQG-DLGQALYLVASGKVRLFRTHLGGQ-----------------------ERTLALLGPGELFGEM 77 (216)
T ss_dssp CEEEEECTTCEEECTT-CBCCEEEEEEESCEEEEEECSSSC-----------------------EEEEEEECTTCEECHH
T ss_pred heEEEeCCCCEEEeCC-CCCCEEEEEEeCEEEEEEECCCCC-----------------------EEEEEEecCCCEEeeh
Confidence 4677888888764432 347899999999999999988763 245578999999853
Q ss_pred ----CCCCeEEEEcCCCCcEEEEEEeecC------CCCcc--------------------------------cccc---c
Q 039441 439 ----PPGHPIALVASPNEKLLTVGFSLNA------RNNQR--------------------------------NFLA---G 473 (539)
Q Consensus 439 ----PaG~~h~i~n~gne~l~~v~F~~na------~n~~~--------------------------------~fLA---G 473 (539)
..-+++.+.+..+ ..++.+.... .++.. .+|. .
T Consensus 78 ~~~~~~~~~~~~~a~~~--~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl~~~L~~~~~ 155 (216)
T 4ev0_A 78 SLLDEGERSASAVAVED--TELLALFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRVAYALLKLLR 155 (216)
T ss_dssp HHHHCCBCSSEEEESSS--EEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCCCcceEEEEcCC--EEEEEEcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Confidence 2334566677644 5555544322 11110 0000 0
Q ss_pred -cchhcccCcHHHHHHHcCCCHHHHHHhhcCCCCceeE
Q 039441 474 -KINIMNQVERETMEVAFNVPARLIERVFGTNPKESYF 510 (539)
Q Consensus 474 -~~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~~~f 510 (539)
...+.-.++.+-||..+|++.+++.++++.=.+.++|
T Consensus 156 ~~~~~~~~~t~~~lA~~lg~sr~tvsR~l~~l~~~g~I 193 (216)
T 4ev0_A 156 QGLGPLFQIRHHELAALAGTSRETVSRVLHALAEEGVV 193 (216)
T ss_dssp TTCCSEEECCHHHHHHHHTSCHHHHHHHHHHHHHTTSE
T ss_pred cCCccCCCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCE
Confidence 0122345789999999999999999888654333233
No 341
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=55.33 E-value=15 Score=31.01 Aligned_cols=54 Identities=15% Similarity=0.181 Sum_probs=38.2
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEE
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFI 437 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~v 437 (539)
+....+.+|.++...- -.++.+.||++|...+....++|. ......+.+||+|-
T Consensus 35 ~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~g~-----------------------~~~~~~~~~G~~~G 88 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQG-EPAHAFYYLISGCVKIYRLTPEGQ-----------------------EKILEVTNERNTFA 88 (154)
T ss_dssp CEEEEECTTCEEECTT-SBCCEEEEEEESCEEEECCCC----------------------------CCEEECTTEEES
T ss_pred CcEEEecCCCEEecCC-CccceEEEEEeCEEEEEEECCCCC-----------------------EEEEEEccCCCeec
Confidence 6677888888874433 357889999999999988777652 23446789999873
No 342
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=54.95 E-value=48 Score=30.79 Aligned_cols=82 Identities=10% Similarity=-0.012 Sum_probs=55.0
Q ss_pred ccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCC
Q 039441 353 LQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSP 432 (539)
Q Consensus 353 L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~ 432 (539)
|......+....+.+|-++...- -.++.+.+|++|..++....++|. ..+...+.+
T Consensus 36 L~~~~~~~~~~~~~~ge~i~~~G-~~~~~ly~v~~G~v~~~~~~~~G~-----------------------~~~l~~~~~ 91 (243)
T 3la7_A 36 MATGAFPPVVETFERNKTIFFPG-DPAERVYFLLKGAVKLSRVYEAGE-----------------------EITVALLRE 91 (243)
T ss_dssp HCCSSCCCEEEEECTTCEEECTT-SBCCEEEEEEESCEEEEEECTTCC-----------------------EEEEEEECT
T ss_pred HhhccchheeEEECCCCEEEcCC-CCCceEEEEEeCEEEEEEECCCCC-----------------------EEEEEEecC
Confidence 33333444588899999875433 357899999999999999998873 245578999
Q ss_pred CcEEEe-------CCCCeEEEEcCCCCcEEEEEEe
Q 039441 433 GVVFII-------PPGHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 433 GDV~vV-------PaG~~h~i~n~gne~l~~v~F~ 460 (539)
||+|-. |..+.+.+.+..+ ..++.+.
T Consensus 92 g~~~G~~~~~~~~~~~~~~~~~A~~~--~~v~~i~ 124 (243)
T 3la7_A 92 NSVFGVLSLLTGNKSDRFYHAVAFTP--VELLSAP 124 (243)
T ss_dssp TCEESCHHHHSSCCSBCCEEEEESSS--EEEEEEE
T ss_pred CCEEcchHHhCCCCCcceEEEEEccc--eEEEEEc
Confidence 998843 2223356666643 5555543
No 343
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=54.93 E-value=25 Score=32.26 Aligned_cols=75 Identities=16% Similarity=0.200 Sum_probs=52.3
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe-
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII- 438 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV- 438 (539)
+....+.+|.++...= -.++.+.||++|..++....++|. ......+.+||+|-.
T Consensus 34 ~~~~~~~~g~~i~~~G-~~~~~~y~i~~G~v~~~~~~~~G~-----------------------~~~~~~~~~G~~~G~~ 89 (237)
T 3fx3_A 34 AVWRSYDRGETLFLQE-EKAQAIHVVIDGWVKLFRMTPTGS-----------------------EAVVSVFTRGESFGEA 89 (237)
T ss_dssp CEEEEECTTCEEECTT-SCCCEEEEEEESEEEEEEECTTSC-----------------------EEEEEEEETTEEECHH
T ss_pred CEEEEECCCCEEEcCC-CccceEEEEEeeEEEEEEECCCCC-----------------------EEEEEEeCCCCEechH
Confidence 5677888888864432 357899999999999999988863 245577899999844
Q ss_pred ----CCCCeEEEEcCCCCcEEEEEEe
Q 039441 439 ----PPGHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 439 ----PaG~~h~i~n~gne~l~~v~F~ 460 (539)
..-+++.+.+..+ ..++.+.
T Consensus 90 ~~~~~~~~~~~~~a~~~--~~v~~i~ 113 (237)
T 3fx3_A 90 VALRNTPYPVSAEAVTP--CEVMHIP 113 (237)
T ss_dssp HHHHTCCCSSEEEESSS--EEEEEEE
T ss_pred HHhcCCCCCceEEECCc--eEEEEEc
Confidence 2335556667643 5555544
No 344
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=54.57 E-value=28 Score=30.83 Aligned_cols=75 Identities=7% Similarity=-0.020 Sum_probs=51.7
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEE-e
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFI-I 438 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~v-V 438 (539)
+....+.+|.++..- .-.++.+.||++|..++....++|. .....-+.+||+|- +
T Consensus 30 ~~~~~~~~g~~l~~~-G~~~~~~y~i~~G~v~~~~~~~~G~-----------------------e~~~~~~~~g~~~ge~ 85 (194)
T 3dn7_A 30 FQLKKVRKKETLLKT-GEICRINYFVVKGCLRLFFIDEKGI-----------------------EQTTQFAIENWWLSDY 85 (194)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTSC-----------------------EEEEEEEETTCEECCH
T ss_pred CEEEEEcCCCEEECC-CCeeeEEEEeecCeEEEEEECCCCC-----------------------EEEEEEccCCcEEeeh
Confidence 357788888876332 2247899999999999999988763 24456789999996 3
Q ss_pred C-----CCCeEEEEcCCCCcEEEEEEe
Q 039441 439 P-----PGHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 439 P-----aG~~h~i~n~gne~l~~v~F~ 460 (539)
. .-+++.+.+..+ ..++.+.
T Consensus 86 ~~~~~~~~~~~~~~a~~~--~~v~~i~ 110 (194)
T 3dn7_A 86 MAFQKQQPADFYIQSVEN--CELLSIT 110 (194)
T ss_dssp HHHHHTCBCSSEEEESSC--EEEEEEE
T ss_pred HHHhcCCCCceEEEEECC--EEEEEEe
Confidence 1 235566677644 5555544
No 345
>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.78 E-value=36 Score=31.46 Aligned_cols=67 Identities=16% Similarity=0.297 Sum_probs=42.4
Q ss_pred ceeeEEEeeeCCCeeecccccC---CCcEEEEEeceEEE----EEEeCCCceeeecCCCcEE---EeCCCCeEEEEecC
Q 039441 199 DNYRLAILEANPSTLVVPHHSD---AETILVLLKGKGVI----TLVSHERRESFNMEHGDVI---SVPAGTTYYLSNQD 267 (539)
Q Consensus 199 ~~~Rl~il~l~P~~l~lPh~~d---A~~~~yV~~G~g~i----~~v~pg~~~~~~v~~GDV~---~iPaG~~h~i~N~g 267 (539)
..+|+.+...+|..|.+|.++. ...|+ +.|.++. .+...-+.....+..||++ +-+.|-.|+..|-.
T Consensus 65 G~l~~GvT~~dP~~l~lP~~~~~L~~~~Wv--~~~~~v~~ng~~~~e~~~~~l~~l~~Gd~ig~~~~~~G~l~~~iNg~ 141 (170)
T 2e63_A 65 GSIEIGVTALDPSVLDFPSSATGLKGGSWV--VSGCSVLRDGRSVLEEYGQDLDQLGEGDRVGVERTVAGELRLWVNGR 141 (170)
T ss_dssp CCCEEEEESSCTTSCCCCSSGGGCCSSEEE--ESSSEEEESSCEEEESCSSCGGGCCSSCCEEEEECTTSCEEEEESSC
T ss_pred eeEEEEEEccChhhccCCCChhhCCCCeEE--EeccccccCCcccchhccccccccCCCCEEEEEEcCCcEEEEEECCc
Confidence 3678999999999999999752 12232 2221111 1111222334466899977 45789999999965
No 346
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=52.78 E-value=9.1 Score=34.95 Aligned_cols=52 Identities=13% Similarity=0.137 Sum_probs=41.4
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEEE
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVIS 254 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~~ 254 (539)
..+.+..++.++...-..++.++||++|.+.+...++++.+ ...+.+||++-
T Consensus 32 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 85 (227)
T 3dkw_A 32 SDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFA 85 (227)
T ss_dssp CEEEECCTTEEEECTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEES
T ss_pred CEEEEECCCCEEEcCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 34556699999888888889999999999999988876543 46678898873
No 347
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=52.56 E-value=32 Score=32.49 Aligned_cols=76 Identities=13% Similarity=0.040 Sum_probs=52.4
Q ss_pred eEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe
Q 039441 359 GVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII 438 (539)
Q Consensus 359 sva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV 438 (539)
.+....+.+|.++..-= -.++.+.||++|..++....++|. ..+...+.+||+|-.
T Consensus 68 ~~~~~~~~~ge~i~~~G-~~~~~~y~I~~G~v~~~~~~~~G~-----------------------e~~~~~~~~G~~~Ge 123 (260)
T 3kcc_A 68 HCHIHKYPSKSTLIHQG-EKAETLYYIVKGSVAVLIKDEEGK-----------------------EMILSYLNQGDFIGE 123 (260)
T ss_dssp TSEEEEECTTCEEECTT-CBCCEEEEEEECEEEEEEECTTCC-----------------------EEEEEEEETTCEESC
T ss_pred hCEEEEECCCCEEECCC-CcCCeEEEEEeCEEEEEEECCCCC-----------------------EEEEEEcCCCCEEee
Confidence 35677888888764332 247889999999999999988763 245578999999843
Q ss_pred C-----C-CCeEEEEcCCCCcEEEEEEe
Q 039441 439 P-----P-GHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 439 P-----a-G~~h~i~n~gne~l~~v~F~ 460 (539)
. . .+++.+.+..+ ..++.+.
T Consensus 124 ~~~~~~~~~~~~~~~A~~~--~~l~~i~ 149 (260)
T 3kcc_A 124 LGLFEEGQERSAWVRAKTA--CEVAEIS 149 (260)
T ss_dssp TTTTSTTCBCCSEEEESSC--EEEEEEE
T ss_pred hHHhCCCCCCceEEEECCC--eEEEEEc
Confidence 2 2 34556677644 5555443
No 348
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=52.35 E-value=21 Score=33.19 Aligned_cols=49 Identities=14% Similarity=0.178 Sum_probs=37.5
Q ss_pred eeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--eeecCCCcEEEeC
Q 039441 207 EANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SFNMEHGDVISVP 256 (539)
Q Consensus 207 ~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~~v~~GDV~~iP 256 (539)
+..++.++...--.++.++||++|.+.+...++++.+ ..-+ +||++-..
T Consensus 22 ~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~ 72 (238)
T 2bgc_A 22 QFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMS 72 (238)
T ss_dssp EEETTCEEECTTCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEES
T ss_pred EECCCCEEEeCCCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecch
Confidence 3488888877667788999999999999998887654 2345 88887543
No 349
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=51.80 E-value=14 Score=38.74 Aligned_cols=26 Identities=12% Similarity=0.084 Sum_probs=22.9
Q ss_pred EEeeeCCCcEEEeCCCCeEEEEcCCC
Q 039441 426 ISANLSPGVVFIIPPGHPIALVASPN 451 (539)
Q Consensus 426 ~~~~L~~GDV~vVPaG~~h~i~n~gn 451 (539)
.+..-.+||+++||+|.||-+.|..+
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~ 318 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHS 318 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSE
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccc
Confidence 56677999999999999999999853
No 350
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=51.79 E-value=32 Score=31.21 Aligned_cols=75 Identities=9% Similarity=-0.044 Sum_probs=51.6
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeC
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIP 439 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVP 439 (539)
+....+.+|.++...= -.++.+.||++|..++....++|. ..+...+.+||+|-..
T Consensus 34 ~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~G~-----------------------~~~~~~~~~g~~~G~~ 89 (230)
T 3iwz_A 34 SHRRRYPTRTDVFRPG-DPAGTLYYVISGSVSIIAEEDDDR-----------------------ELVLGYFGSGEFVGEM 89 (230)
T ss_dssp SEEEEECTTCEEECTT-SBCCEEEEEEESCEEEEEECTTSC-----------------------EEEEEEECTTCEESCG
T ss_pred CeEEEeCCCCEEECCC-CCCCeEEEEEeeEEEEEEECCCCC-----------------------EEEEEEecCCCEEEeh
Confidence 4677888888764432 247899999999999999998863 2455778999999532
Q ss_pred ----C--CCeEEEEcCCCCcEEEEEEe
Q 039441 440 ----P--GHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 440 ----a--G~~h~i~n~gne~l~~v~F~ 460 (539)
. -+.+.+.+..+ ..++.+.
T Consensus 90 ~~~~~~~~~~~~~~a~~~--~~v~~i~ 114 (230)
T 3iwz_A 90 GLFIESDTREVILRTRTQ--CELAEIS 114 (230)
T ss_dssp GGTSCCSBCCSEEEESSC--EEEEEEE
T ss_pred hhhcCCCCceeEEEEcCc--EEEEEEe
Confidence 1 24455666644 4555443
No 351
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=50.88 E-value=12 Score=39.09 Aligned_cols=24 Identities=29% Similarity=0.358 Sum_probs=21.4
Q ss_pred eeecCCCcEEEeCCCCeEEEEecC
Q 039441 244 SFNMEHGDVISVPAGTTYYLSNQD 267 (539)
Q Consensus 244 ~~~v~~GDV~~iPaG~~h~i~N~g 267 (539)
++.-..||+|+||||.+|-+.|..
T Consensus 294 ~~~Q~~GeavfiPaG~~HQV~Nl~ 317 (392)
T 2ypd_A 294 TLIQFLGDAIVLPAGALHQVQNFH 317 (392)
T ss_dssp EEEEETTCEEEECTTCEEEEEESS
T ss_pred EEEEcCCCEEEecCCCHHHHhccc
Confidence 445588999999999999999997
No 352
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=50.81 E-value=29 Score=32.92 Aligned_cols=51 Identities=14% Similarity=0.233 Sum_probs=41.0
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCc---eeeecCCCcEE
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERR---ESFNMEHGDVI 253 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~---~~~~v~~GDV~ 253 (539)
+......|+.++...--.++.+++|++|++.+....+++. ....+.+||++
T Consensus 180 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCccCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 4455668999998887888999999999999988776542 36778999987
No 353
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=50.36 E-value=14 Score=30.92 Aligned_cols=47 Identities=13% Similarity=0.228 Sum_probs=34.7
Q ss_pred EEeeeC-CCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEE
Q 039441 204 AILEAN-PSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVI 253 (539)
Q Consensus 204 ~il~l~-P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~ 253 (539)
.+.+.. ++.++.-.--.++.++||++|.+.+.. +++.. ..+.+||++
T Consensus 40 ~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~--~~g~~-~~l~~G~~f 87 (134)
T 2d93_A 40 IFEVVEQAGAIILEDGQELDSWYVILNGTVEISH--PDGKV-ENLFMGNSF 87 (134)
T ss_dssp EEEEECSSSCEEECTTCEECEEEECCBSCEEEEC--SSSCE-EEECTTCEE
T ss_pred eEEEecCCCCEEEeCCCCCCeEEEEEeCEEEEEc--CCCcE-EEecCCCcc
Confidence 345558 888887776677889999999998773 44444 668888876
No 354
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=50.15 E-value=13 Score=30.91 Aligned_cols=49 Identities=12% Similarity=0.164 Sum_probs=37.2
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce--ee--ecCCCcEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE--SF--NMEHGDVI 253 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~--~~--~v~~GDV~ 253 (539)
.+.+..++.++...--.++.++||++|.+.+. ..+++.+ .. .+.+||++
T Consensus 30 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 30 KPCLFTEKSYLVREGDPVNEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp BCCCBCTTEEEECTTSBCSEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBS
T ss_pred eEEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEe
Confidence 44566899988888778899999999999954 4555443 33 78899976
No 355
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=49.79 E-value=9 Score=41.78 Aligned_cols=23 Identities=22% Similarity=0.296 Sum_probs=20.8
Q ss_pred ecCCCcEEEeCCCCeEEEEecCC
Q 039441 246 NMEHGDVISVPAGTTYYLSNQDN 268 (539)
Q Consensus 246 ~v~~GDV~~iPaG~~h~i~N~g~ 268 (539)
.=++||.|++++|+.||.+|.|-
T Consensus 341 vQkpGd~Vi~~PgayH~v~n~G~ 363 (531)
T 3avr_A 341 IQRPGDLVWINAGTVHWVQAIGW 363 (531)
T ss_dssp EECTTCEEEECTTCEEEEEESSS
T ss_pred EECCCCEEEECCCceEEEEecce
Confidence 34899999999999999999994
No 356
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=49.76 E-value=31 Score=30.90 Aligned_cols=55 Identities=9% Similarity=0.098 Sum_probs=41.9
Q ss_pred eEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEE
Q 039441 359 GVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFI 437 (539)
Q Consensus 359 sva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~v 437 (539)
.+....+.+|.++...= -.++.+.+|++|.+.+....++|. ......+.+||+|-
T Consensus 61 ~~~~~~~~~ge~i~~~G-~~~~~ly~I~~G~v~v~~~~~~g~-----------------------~~~~~~~~~G~~fG 115 (187)
T 3gyd_A 61 YMQCYAAPRDCQLLTEG-DPGDYLLLILTGEVNVIKDIPNKG-----------------------IQTIAKVGAGAIIG 115 (187)
T ss_dssp TCEEEEECTTCEEECTT-SCCCEEEEEEEEEEEEEEEETTTE-----------------------EEEEEEEETTCEES
T ss_pred hcEEEEeCCCCEEEcCC-CCCCeEEEEEeCEEEEEEECCCCC-----------------------eEEEEEccCCCeee
Confidence 46677888888864432 357899999999999999988762 24557899999873
No 357
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=49.72 E-value=15 Score=30.52 Aligned_cols=45 Identities=4% Similarity=0.170 Sum_probs=34.7
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVI 253 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~ 253 (539)
.+.+..|+.++...-..++.++||++|.+.+.... ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~-----~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN-----PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTSCCCEEEEEEESCEEECSSS-----CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCCCcceEEEEEeeEEEEEeCC-----cceECCCCEe
Confidence 34556999999888788899999999999986543 2456777765
No 358
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=49.61 E-value=25 Score=31.77 Aligned_cols=47 Identities=9% Similarity=0.240 Sum_probs=34.6
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVI 253 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~ 253 (539)
......|+.++...--.++.++||++|.+.+. .+++.. ..+.+||++
T Consensus 96 ~~~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~--~~~g~~-~~l~~G~~f 142 (202)
T 3bpz_A 96 KFEVFQPGDYIIREGTIGKKMYFIQHGVVSVL--TKGNKE-MKLSDGSYF 142 (202)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEECEEEEE--CTTSCC-EEEETTCEE
T ss_pred CceEECCCCEEEECCCcCCeEEEEeccEEEEE--ECCCeE-EEEcCCCEe
Confidence 34455899988877777889999999998874 344433 357888876
No 359
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=49.61 E-value=25 Score=32.14 Aligned_cols=121 Identities=16% Similarity=0.158 Sum_probs=73.3
Q ss_pred eEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe
Q 039441 359 GVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII 438 (539)
Q Consensus 359 sva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV 438 (539)
.+....+.+|.++.-.- -.++.+.||++|..++....++|. ..+...+.+||+|-.
T Consensus 32 ~~~~~~~~~g~~i~~~g-~~~~~~y~v~~G~v~~~~~~~~g~-----------------------~~~~~~~~~G~~~G~ 87 (232)
T 2gau_A 32 EIQPFPCKKASTVFSEG-DIPNNLFYLYEGKIKILREGVYGR-----------------------FHISRIVKPGQFFGM 87 (232)
T ss_dssp HCEEEEECTTCEEECTT-CCCCEEEEEEESCEEEEC-----C-----------------------CCEEEEECTTCEESH
T ss_pred hCeEEEECCCCEEEeCC-CCCCeEEEEEeCEEEEEEECCCCC-----------------------EEEEEEeCCCCEeee
Confidence 36778888998864432 247789999999999988887653 244578999999842
Q ss_pred -----CCCCeEEEEcCCCCcEEEEEEeecC------CCCcc--------------------------------ccc---c
Q 039441 439 -----PPGHPIALVASPNEKLLTVGFSLNA------RNNQR--------------------------------NFL---A 472 (539)
Q Consensus 439 -----PaG~~h~i~n~gne~l~~v~F~~na------~n~~~--------------------------------~fL---A 472 (539)
...+++.+++..+ ..++.+.... .++.. .+| +
T Consensus 88 ~~~~~~~~~~~~~~A~~~--~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~ 165 (232)
T 2gau_A 88 RPYFAEETCSSTAIAVEN--SKVLAIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILK 165 (232)
T ss_dssp HHHHHTSCCSSEEEESSC--EEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred ehhhCCCCcceEEEEecc--eEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 2335666777644 5555544221 11100 011 0
Q ss_pred ---cc----chhcccCcHHHHHHHcCCCHHHHHHhhcCCC
Q 039441 473 ---GK----INIMNQVERETMEVAFNVPARLIERVFGTNP 505 (539)
Q Consensus 473 ---G~----~svL~~~p~evLa~AF~vs~e~v~kL~~~q~ 505 (539)
|. ..+.-.++.+-||..+|++.+++.++++.-.
T Consensus 166 ~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~tvsR~l~~l~ 205 (232)
T 2gau_A 166 ENFGFENDGATLSIYLSREELATLSNMTVSNAIRTLSTFV 205 (232)
T ss_dssp HHHCBCTTSSBBSCCCCHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHcCCCCCCcEEEcccCHHHHHHHhCCCHHHHHHHHHHHH
Confidence 00 1122357889999999999999888876543
No 360
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=49.39 E-value=39 Score=30.69 Aligned_cols=75 Identities=11% Similarity=0.226 Sum_probs=51.5
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe-
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII- 438 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV- 438 (539)
+....+.+|.++.-.- -.++.+.+|++|...+....++|. ......+.+||+|-.
T Consensus 29 ~~~~~~~~g~~i~~~G-~~~~~~y~i~~G~v~~~~~~~~g~-----------------------~~~~~~~~~G~~~G~~ 84 (227)
T 3d0s_A 29 LQPVDFPRGHTVFAEG-EPGDRLYIIISGKVKIGRRAPDGR-----------------------ENLLTIMGPSDMFGEL 84 (227)
T ss_dssp SCEEEECTTCEEECTT-CCCCEEEEEEESCEEEEEECTTSC-----------------------EEEEEEECTTCEESCH
T ss_pred CeEEEeCCCCEEEcCC-CcCCEEEEEEeeEEEEEEECCCCc-----------------------EEEEEEecCCCEEeeH
Confidence 3467788888764322 247889999999999999988763 245578999999842
Q ss_pred ----CCCCeEEEEcCCCCcEEEEEEe
Q 039441 439 ----PPGHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 439 ----PaG~~h~i~n~gne~l~~v~F~ 460 (539)
...+++.+.+..+ ..++.+.
T Consensus 85 ~~~~~~~~~~~~~A~~~--~~v~~i~ 108 (227)
T 3d0s_A 85 SIFDPGPRTSSATTITE--VRAVSMD 108 (227)
T ss_dssp HHHSCSCCSSEEEESSC--EEEEEEE
T ss_pred HHcCCCCceeEEEEccc--EEEEEEe
Confidence 2345666777644 5555443
No 361
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=48.95 E-value=46 Score=30.34 Aligned_cols=75 Identities=13% Similarity=0.081 Sum_probs=51.7
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeC
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIP 439 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVP 439 (539)
+....+.+|.++...= -.++.+.||++|...+....++|. ......+.+||+|-..
T Consensus 29 ~~~~~~~~g~~i~~~G-~~~~~~y~i~~G~v~~~~~~~~g~-----------------------~~~~~~~~~g~~~G~~ 84 (231)
T 3e97_A 29 VTERNFQPDELVVEQD-AEGEALHLVTTGVVRVSRVSLGGR-----------------------ERVLGDIYAPGVVGET 84 (231)
T ss_dssp EEEEEECTTCBCCCTT-CTTTCEEEECSSEEEEEEECC--C-----------------------EEEEEEEESSEEESTT
T ss_pred cEEEEECCCCEEEeCC-CCCCeEEEEEecEEEEEEECCCCc-----------------------eEEEEecCCCCEEeeH
Confidence 5678888888864433 357889999999999999988763 2455789999998532
Q ss_pred -----CCCeEEEEcCCCCcEEEEEEe
Q 039441 440 -----PGHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 440 -----aG~~h~i~n~gne~l~~v~F~ 460 (539)
.-+++.+.+..+ ..++.+.
T Consensus 85 ~~~~~~~~~~~~~a~~~--~~v~~i~ 108 (231)
T 3e97_A 85 AVLAHQERSASVRALTP--VRTLMLH 108 (231)
T ss_dssp TTTCCCCCCEEEEESSC--EEEEEEC
T ss_pred HHhCCCCceEEEEECCc--EEEEEEe
Confidence 335566677643 5555543
No 362
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=48.72 E-value=30 Score=30.85 Aligned_cols=116 Identities=16% Similarity=0.099 Sum_probs=69.5
Q ss_pred EEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe----C
Q 039441 364 EINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII----P 439 (539)
Q Consensus 364 ~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV----P 439 (539)
.+.+|.++... .-.++.+.||++|...+....++|. ......+.+||+|-. .
T Consensus 3 ~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~-----------------------~~~~~~~~~G~~~Ge~~~~~ 58 (195)
T 3b02_A 3 RFARKETIYLR-GEEARTLYRLEEGLVRVVELLPDGR-----------------------LITLRHVLPGDYFGEEALEG 58 (195)
T ss_dssp EECTTCEEECT-TSBCCCEEEEEESCEEEEEECTTSC-----------------------EEEEEEECTTCEECGGGGTC
T ss_pred EcCCCCEEECC-CCCCCeEEEEEeCEEEEEEECCCCC-----------------------EEEEEEecCCCEechhhhCC
Confidence 45566654322 2246789999999999999888763 245578999999843 1
Q ss_pred CCCeEEEEcCCCCcEEEEEEeecCCCCcc--------------------------------ccc---c---ccc---h-h
Q 039441 440 PGHPIALVASPNEKLLTVGFSLNARNNQR--------------------------------NFL---A---GKI---N-I 477 (539)
Q Consensus 440 aG~~h~i~n~gne~l~~v~F~~na~n~~~--------------------------------~fL---A---G~~---s-v 477 (539)
.-+++.+.+..+ ..++.+....-.+.. .+| + |.. . +
T Consensus 59 ~~~~~~~~A~~~--~~v~~i~~~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~ 136 (195)
T 3b02_A 59 KAYRYTAEAMTE--AVVQGLEPRAMDHEALHRVARNLARQMRRVQAYEAHLQTGELRARIARYLLFLADTPLSARDRQGI 136 (195)
T ss_dssp SBCSSEEEESSS--EEEEEECGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTSTTEEEETTEE
T ss_pred CCceeEEEECCc--EEEEEEcHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCee
Confidence 224556666543 555554432200000 001 0 000 0 2
Q ss_pred cccCcHHHHHHHcCCCHHHHHHhhcCCC
Q 039441 478 MNQVERETMEVAFNVPARLIERVFGTNP 505 (539)
Q Consensus 478 L~~~p~evLa~AF~vs~e~v~kL~~~q~ 505 (539)
.-.++.+-||..+|++.++|.++++.-.
T Consensus 137 ~~~~t~~~lA~~lg~sr~tvsR~l~~L~ 164 (195)
T 3b02_A 137 YVTVSHEEIADATASIRESVSKVLADLR 164 (195)
T ss_dssp EEECCHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred eccCCHHHHHHHhCCCHHHHHHHHHHHH
Confidence 2347888999999999998888876543
No 363
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=48.04 E-value=29 Score=32.00 Aligned_cols=119 Identities=11% Similarity=0.107 Sum_probs=75.9
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe-
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII- 438 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV- 438 (539)
+....+.+|.++.-.- -.++.+.||++|..++....++|. ..+...+.+||+|-.
T Consensus 43 ~~~~~~~~ge~i~~~G-~~~~~~y~i~~G~v~~~~~~~~G~-----------------------~~~l~~~~~G~~fG~~ 98 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSG-NPCTQLCFLLKGEISIVTNAKENI-----------------------YTVIEQIEAPYLIEPQ 98 (232)
T ss_dssp CEEEEECTTCEEECTT-SBCCEEEEEEESEEEEEEECGGGS-----------------------CEEEEEEESSEEECGG
T ss_pred cEEEEECCCCEEECCC-CcccEEEEEEeeEEEEEEECCCCC-----------------------EEEEEEccCCCeeeeh
Confidence 6778888998874432 357889999999999998888753 245577899998843
Q ss_pred ----CCC-CeEEEEcCCCCcEEEEEEeecC------CCCcc-------------------c-------------cc---c
Q 039441 439 ----PPG-HPIALVASPNEKLLTVGFSLNA------RNNQR-------------------N-------------FL---A 472 (539)
Q Consensus 439 ----PaG-~~h~i~n~gne~l~~v~F~~na------~n~~~-------------------~-------------fL---A 472 (539)
... +++.+.+..+ ..++.+.... .++.. . +| +
T Consensus 99 ~~~~~~~~~~~~~~A~~~--~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~ 176 (232)
T 1zyb_A 99 SLFGMNTNYASSYVAHTE--VHTVCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHC 176 (232)
T ss_dssp GGSSSCCBCSSEEEESSC--EEEEEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHHHHTTC
T ss_pred HHhCCCCCCceEEEEccc--eEEEEEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 222 5667777644 5555444221 11100 0 00 0
Q ss_pred ccc--hhcccCcHHHHHHHcCCCHHHHHHhhcCC
Q 039441 473 GKI--NIMNQVERETMEVAFNVPARLIERVFGTN 504 (539)
Q Consensus 473 G~~--svL~~~p~evLa~AF~vs~e~v~kL~~~q 504 (539)
-.. .+.-.++.+-||..+|++.+.+.++++.-
T Consensus 177 ~~~~~~~~~~~t~~~lA~~lG~sr~tvsR~l~~l 210 (232)
T 1zyb_A 177 EKPQGEKTFKVKMDDLARCLDDTRLNISKTLNEL 210 (232)
T ss_dssp SSSSSCEEEECCHHHHHHHHTSCHHHHHHHHHHH
T ss_pred hhcCCeEEecCCHHHHHHHhCCChhHHHHHHHHH
Confidence 000 12234789999999999999988887653
No 364
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=47.07 E-value=1.4e+02 Score=28.07 Aligned_cols=83 Identities=16% Similarity=0.175 Sum_probs=61.0
Q ss_pred ccCCCceEEEeCCcccc--cccccceeEEEEEEcCCceecceecCCCCEEEEEEeceE-EEEEecCCCCccchhhhhhhh
Q 039441 335 YNNNFGRFFEATPKDYQ--QLQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRG-RFEMGGPLSSRWSQESQREQQ 411 (539)
Q Consensus 335 ~sn~~G~i~~~~~~~fP--~L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g-~v~vV~p~gs~~s~~~~~g~~ 411 (539)
++|.+|...++-. +| .+.+.+..++.++|...|-+... |.-+.++.+++|.| .+.+ .+.
T Consensus 24 WkNGgG~TrEI~~--~P~~~~~~F~wRiSiA~V~~~g~FS~F--pG~dR~l~lL~G~gl~L~~--~g~------------ 85 (193)
T 3esg_A 24 WKNGGGSTEEITR--DAGTGLEGFGWRLSIADIGESGGFSSF--AGYQRVITVIQGAGMVLTV--DGE------------ 85 (193)
T ss_dssp CTTSSEEEEEEEE--CCCBTTTBCSEEEEEEEECSSEECCCC--TTCEEEEEEEESSCEEEEE--TTS------------
T ss_pred ccCCCeEEEEEEE--cCCCcCCCceEEEEEEEEcCCCCCCCC--CCceEEEEEEcCCcEEEEe--CCC------------
Confidence 6777888777643 24 35677888999999998888776 78999999999984 4443 221
Q ss_pred HHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEEEEcC
Q 039441 412 EEEEEEESSRELQKISANLSPGVVFIIPPGHPIALVAS 449 (539)
Q Consensus 412 ~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~i~n~ 449 (539)
....|.+++.+.++-..+..-...
T Consensus 86 --------------~~~~L~~~~p~~F~G~~~v~a~L~ 109 (193)
T 3esg_A 86 --------------EQRGLLPLQPFAFRGDSQVSCRLI 109 (193)
T ss_dssp --------------CCEEECBTCCEEEETTSCEEEEES
T ss_pred --------------ccEecCCCCCEEeCCCCeEEEEEC
Confidence 113477888999998888887764
No 365
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=46.78 E-value=11 Score=40.83 Aligned_cols=23 Identities=22% Similarity=0.332 Sum_probs=20.8
Q ss_pred ecCCCcEEEeCCCCeEEEEecCC
Q 039441 246 NMEHGDVISVPAGTTYYLSNQDN 268 (539)
Q Consensus 246 ~v~~GDV~~iPaG~~h~i~N~g~ 268 (539)
.=++||.|++++|+.||.+|.|=
T Consensus 316 iQkPGdfVit~PgtyH~Vqs~Gf 338 (510)
T 4ask_A 316 VQRPGDLVWINAGTVHWVQATGW 338 (510)
T ss_dssp EECTTCEEEECTTCEEEEEESSS
T ss_pred EECCCCEEEECCCceEEEEecCe
Confidence 44899999999999999999984
No 366
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=45.69 E-value=31 Score=30.92 Aligned_cols=114 Identities=13% Similarity=0.080 Sum_probs=72.0
Q ss_pred EEEEcCCceecceecCCC--CEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe-
Q 039441 362 YVEINQGGMMVPHYNSKA--TTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII- 438 (539)
Q Consensus 362 ~v~L~pGgm~~PHwhpnA--~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV- 438 (539)
...+.+|.++...-. .+ +.+.+|++|..++....++|. ..+...+.+||+|-.
T Consensus 7 ~~~~~~g~~i~~~g~-~~~~~~~y~v~~G~v~~~~~~~~G~-----------------------~~~~~~~~~g~~~G~~ 62 (202)
T 2zcw_A 7 TVSFKAGDVILYPGV-PGPRDRAYRVLEGLVRLEAVDEEGN-----------------------ALTLRLVRPGGFFGEE 62 (202)
T ss_dssp CEEECTTCEEECSBS-CCTTCCCEEEEESCEEEEEECTTSC-----------------------EEEEEEECTTCEECTH
T ss_pred EEEECCCCEEECCCC-CCCCCeEEEEEeCEEEEEEECCCCc-----------------------EEEEEEecCCCEeeeh
Confidence 456777777643322 35 679999999999999988763 245578999999853
Q ss_pred ---CCCCeEEEEcCCCCcEEEEEEeecCCCCccc----------------------------------cc---c---cc-
Q 039441 439 ---PPGHPIALVASPNEKLLTVGFSLNARNNQRN----------------------------------FL---A---GK- 474 (539)
Q Consensus 439 ---PaG~~h~i~n~gne~l~~v~F~~na~n~~~~----------------------------------fL---A---G~- 474 (539)
...+++.+.+..+ ..++.+ ... .. +. +| + |.
T Consensus 63 ~l~~~~~~~~~~A~~~--~~v~~i-~~~-~~-p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~ 137 (202)
T 2zcw_A 63 ALFGQERIYFAEAATD--VRLEPL-PEN-PD-PELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAH 137 (202)
T ss_dssp HHHTCCBCSEEEESSC--EEEEEC-CSS-CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTEE
T ss_pred hcCCCCcceEEEEccc--EEEEEE-hHh-cC-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCC
Confidence 2335666677644 555555 332 11 10 00 0 00
Q ss_pred ---chhcccCcHHHHHHHcCCCHHHHHHhhcCC
Q 039441 475 ---INIMNQVERETMEVAFNVPARLIERVFGTN 504 (539)
Q Consensus 475 ---~svL~~~p~evLa~AF~vs~e~v~kL~~~q 504 (539)
..+.-.++.+-||..+|++.+.|.++++.-
T Consensus 138 ~~~~~~~~~~t~~~lA~~lg~sr~tvsR~l~~L 170 (202)
T 2zcw_A 138 EEEGKVVLKATHDELAAAVGSVRETVTKVIGEL 170 (202)
T ss_dssp EETTEEEEECCHHHHHHHHTCCHHHHHHHHHHH
T ss_pred CCCcEEccCCCHHHHHHHhCCCHHHHHHHHHHH
Confidence 012234788899999999999888887653
No 367
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=43.19 E-value=1.8e+02 Score=27.45 Aligned_cols=83 Identities=16% Similarity=0.103 Sum_probs=55.4
Q ss_pred cccCCCceEEEeCCccccc---ccccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhh
Q 039441 334 IYNNNFGRFFEATPKDYQQ---LQEIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQ 410 (539)
Q Consensus 334 ~~sn~~G~i~~~~~~~fP~---L~~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~ 410 (539)
.++|.+|..+++- +|. +.+.+..++.++|...|-+... |.-+.++.+++|.|..=.+ ++
T Consensus 18 pWkNGgG~TrEI~---~P~~~~~~~F~wRiSiA~V~~~g~FS~F--pGidR~i~lL~G~g~~L~~-~~------------ 79 (200)
T 1yll_A 18 PWKNGAGSTEEIA---RDGGDGLDGFGWRLSIADVGESGGFSGF--AGYQRIISVLEGGGMRLRV-DG------------ 79 (200)
T ss_dssp C-----CEEEEEE---ESSCSGGGSCSEEEEEEEECSCEEECCC--TTCEEEEEEEESSCEEEEE-TT------------
T ss_pred cccCCCEeEEEEE---ecCCCCcCCceEEEEEEEeccCCCCCCC--CCccEEEEEEeCCcEEEec-CC------------
Confidence 3578788888775 453 6677889999999999988776 7889999999998533222 21
Q ss_pred hHHHHHHhhhcceeeEEeee-CCCcEEEeCCCCeEEEEcC
Q 039441 411 QEEEEEEESSRELQKISANL-SPGVVFIIPPGHPIALVAS 449 (539)
Q Consensus 411 ~~~~~~e~~~~~y~~~~~~L-~~GDV~vVPaG~~h~i~n~ 449 (539)
.... | ++++.+.++-..++.-...
T Consensus 80 --------------~~~~-L~~~~~p~~F~G~~~v~a~L~ 104 (200)
T 1yll_A 80 --------------AESA-PLRARQAFAFSGDSEVHCTLL 104 (200)
T ss_dssp --------------EECC-CBCBTCCEEEETTSCEEEEES
T ss_pred --------------Cccc-cCCCCCcEEeCCCCcEEEEEC
Confidence 1112 5 7777777777777766544
No 368
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=42.80 E-value=44 Score=28.22 Aligned_cols=48 Identities=19% Similarity=0.330 Sum_probs=29.7
Q ss_pred CCeeecccc-cCCCcEEEEE-eceEEEEEEeCCCceeeecCCCcEEEeCCCC
Q 039441 210 PSTLVVPHH-SDAETILVLL-KGKGVITLVSHERRESFNMEHGDVISVPAGT 259 (539)
Q Consensus 210 P~~l~lPh~-~dA~~~~yV~-~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~ 259 (539)
.+|++||.- ..-+.++.|+ =|.|.. ...|......|+.||.+.++.|.
T Consensus 22 ~gGI~LP~sakeKp~~G~VvAVG~G~~--~~~G~~~p~~VkvGD~Vlf~k~y 71 (97)
T 1pcq_O 22 AGGIVLTGSAAAKSTRGEVLAVGNGRI--LENGEVKPLDVKVGDIVIFNDGY 71 (97)
T ss_dssp TTSSCCCCCCSCCCCEEEEEEECSEEC--TTSSSCEECSCCTTCEEEECCCS
T ss_pred cceEEeCcccccCCcccEEEEEcCcee--cCCCCEEecccCCCCEEEECCcc
Confidence 578899953 2334444433 355542 22334446789999999999943
No 369
>2cmy_B Beta trypsin, veronica hederifolia trypsin inhibitor; acyl-enzyme intermediate, serine protease inhibitor, zymogen protease, digestion; 2.25A {Veronica hederifolia} SCOP: g.2.4.1
Probab=42.27 E-value=5.9 Score=26.52 Aligned_cols=24 Identities=38% Similarity=0.798 Sum_probs=12.7
Q ss_pred CChHHHHHHHHHHHHHH--------HHHHHHHHHHH
Q 039441 45 QDPEEEYKQCKQLCEKQ--------EAVQRRCERHY 72 (539)
Q Consensus 45 ~dp~~~~~~c~~~c~~q--------~~c~~~ce~~~ 72 (539)
.|| +||+--|-.| +.|...||+++
T Consensus 2 tdp----eqckvmcyaqrhsspellrrcldncekeh 33 (34)
T 2cmy_B 2 TDP----EQCKVMCYAQRHSSPELLRRCLDNCEKEH 33 (34)
T ss_dssp ---------CHHHHHHBC--CCHHHHHHHHHC----
T ss_pred CCh----HHhhHHHHHhhcCCHHHHHHHHHhhhhcc
Confidence 466 6899999988 37888887653
No 370
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=41.92 E-value=37 Score=28.90 Aligned_cols=31 Identities=6% Similarity=0.165 Sum_probs=20.6
Q ss_pred eEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEE
Q 039441 425 KISANLSPGVVFIIPPGHPIALVASPNEKLLT 456 (539)
Q Consensus 425 ~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~ 456 (539)
.....|+.||.+++|.....-+. .+++...+
T Consensus 59 ~~p~~VkvGD~Vlf~ky~Gtevk-~dgeeyli 89 (100)
T 1we3_O 59 RVPLEVKEGDIVVFAKYGGTEIE-IDGEEYVI 89 (100)
T ss_dssp EECCSCCTTCEEEECTTCSEEEE-CSSCEEEE
T ss_pred EEeeecCCCCEEEECCCCCeEEE-ECCEEEEE
Confidence 45567999999999996655544 33444333
No 371
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=41.33 E-value=48 Score=32.26 Aligned_cols=50 Identities=14% Similarity=0.209 Sum_probs=40.4
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCce-eeecCCCcEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRE-SFNMEHGDVI 253 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~-~~~v~~GDV~ 253 (539)
...+..++.++.-.=-.++.++||++|.+.+....+++.+ ...+.+||++
T Consensus 37 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 37 QPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp EEEEECTTCEEECTTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred eEEEECCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 4455699998887777788999999999999998876654 5667888887
No 372
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=40.27 E-value=32 Score=31.42 Aligned_cols=48 Identities=8% Similarity=0.097 Sum_probs=37.1
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVI 253 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~ 253 (539)
......|+.++.-.--.++.+++|.+|.+.+....++ ....+.+||++
T Consensus 149 ~~~~~~~g~~i~~~g~~~~~~y~I~~G~v~v~~~~~~--~~~~l~~g~~f 196 (246)
T 3of1_A 149 DTKIYQPGETIIREGDQGENFYLIEYGAVDVSKKGQG--VINKLKDHDYF 196 (246)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEECEEEEEETTTE--EEEEEETTCEE
T ss_pred heEEeCCCCEEEeCCCcCCEEEEEEecEEEEEEcCCc--eEEEcCCCCcc
Confidence 4455689998888777889999999999988765443 56677788776
No 373
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=40.12 E-value=38 Score=30.70 Aligned_cols=49 Identities=12% Similarity=0.208 Sum_probs=37.3
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEE
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVIS 254 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~ 254 (539)
+......|+.++.-.--.++.++||++|.+.+.. ++.....+.+||++-
T Consensus 98 ~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~---~~~~~~~l~~G~~fG 146 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLK---DNTVLAILGKGDLIG 146 (212)
T ss_dssp CEEEEECTTCEEECTTSBCCEEEEEEECCEEEES---SSCEEEEECTTCEEE
T ss_pred hheEEeCCCCEEEECCCcccEEEEEEecEEEEEE---CCeEEEEecCCCCcC
Confidence 3444569999988777778999999999998764 235566788888874
No 374
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=40.10 E-value=46 Score=28.57 Aligned_cols=54 Identities=7% Similarity=0.036 Sum_probs=38.9
Q ss_pred eEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEE
Q 039441 359 GVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFI 437 (539)
Q Consensus 359 sva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~v 437 (539)
.+....+.+|.++.-. .-.++.+.+|++|...+.. .++|. ......+.+||+|=
T Consensus 60 ~~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~-~~~g~-----------------------~~~~~~~~~G~~fG 113 (161)
T 3idb_B 60 AMFEKLVKEGEHVIDQ-GDDGDNFYVIDRGTFDIYV-KCDGV-----------------------GRCVGNYDNRGSFG 113 (161)
T ss_dssp HCEEEEECTTCEEECT-TSCCCEEEEEEESEEEEEE-EETTE-----------------------EEEEEEEESCCEEC
T ss_pred hcceeEeCCCCEEEeC-CCCCcEEEEEEeCEEEEEE-cCCCC-----------------------eEEEEEcCCCCEec
Confidence 3566788888886433 2357899999999999988 55542 24456789999773
No 375
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=39.56 E-value=47 Score=31.45 Aligned_cols=47 Identities=9% Similarity=0.133 Sum_probs=36.5
Q ss_pred EEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEE
Q 039441 204 AILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVI 253 (539)
Q Consensus 204 ~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~ 253 (539)
.+.+..|+.++.-.--.++.+++|++|...+.. ++.....+.+||++
T Consensus 63 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~---~g~~~~~l~~G~~f 109 (291)
T 2qcs_B 63 FPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV---NNEWATSVGEGGSF 109 (291)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEECCEEEEE---TTEEEEEECTTCEE
T ss_pred cEEEECCCCEEEeCCCCCceEEEEeeeEEEEEE---CCeEEEEcCCCCcc
Confidence 344568999888777788999999999998876 33556677888876
No 376
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=39.55 E-value=1.4e+02 Score=27.32 Aligned_cols=75 Identities=7% Similarity=0.067 Sum_probs=48.8
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeC
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIP 439 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVP 439 (539)
+....+.+|.++..-- -.++.+.+|++|..++....++|.. .+..-+ +||+|-..
T Consensus 18 ~~~~~~~~ge~i~~~G-~~~~~~y~I~~G~v~~~~~~~~G~e-----------------------~~~~~~-~G~~~Ge~ 72 (238)
T 2bgc_A 18 IKPKQFHKKELIFNQW-DPQEYCIFLYDGITKLTSISENGTI-----------------------MNLQYY-KGAFVIMS 72 (238)
T ss_dssp CCCEEEETTCEEECTT-CCCCEEEEEEESEEEEEEECTTSCE-----------------------EEEEEE-ESSEEEES
T ss_pred ceEEEECCCCEEEeCC-CCCceEEEEEecEEEEEEECCCCCE-----------------------EEEEEc-CCCEecch
Confidence 4566788888763322 2467899999999999999887632 333557 99998654
Q ss_pred C---CC----eEEEEcCCCCcEEEEEEe
Q 039441 440 P---GH----PIALVASPNEKLLTVGFS 460 (539)
Q Consensus 440 a---G~----~h~i~n~gne~l~~v~F~ 460 (539)
. +. ++...+.. ++..++.+.
T Consensus 73 ~~~~~~~~~~~~~~~a~~-~~~~v~~i~ 99 (238)
T 2bgc_A 73 GFIDTETSVGYYNLEVIS-EQATAYVIK 99 (238)
T ss_dssp BCTTTCCBSCCCEEEECS-SEEEEEEEE
T ss_pred hhhcCCCcCcceeEEEEE-cceEEEEEe
Confidence 2 21 34555543 346666554
No 377
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=39.38 E-value=97 Score=27.12 Aligned_cols=70 Identities=16% Similarity=0.162 Sum_probs=48.0
Q ss_pred ceecceecCCCCEE--EEEEeceEEEEEecCCCC-ccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeCCCCeEE
Q 039441 369 GMMVPHYNSKATTI--VLVVEGRGRFEMGGPLSS-RWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIPPGHPIA 445 (539)
Q Consensus 369 gm~~PHwhpnA~ei--~yV~~G~g~v~vV~p~gs-~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVPaG~~h~ 445 (539)
+++.-| |+++..| +-|++|+....++...++ .- ....-+.+|+..+||+...|-
T Consensus 27 ~l~~~H-nTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~----------------------~~~~~~~~~~~~~i~Pq~wHr 83 (119)
T 3dl3_A 27 ALLTHH-NTAVDVFGQICVMEGVVTYYGFANSEATEP----------------------EIKVVINAGQFATSPPQYWHR 83 (119)
T ss_dssp HHHSSB-CCCTTEEEEEEEEESEEEEEEESSTTCCSC----------------------SEEEEEETTEEEEECTTCEEE
T ss_pred HHHhcc-CCCCcEEEEEEEEEeEEEEEEEcCCCCCcc----------------------cEEEEeCCCCCceeCCCceEE
Confidence 444556 5677666 468999999998776542 10 011246899999999999999
Q ss_pred EEcCCCCcEEE-EEEeecC
Q 039441 446 LVASPNEKLLT-VGFSLNA 463 (539)
Q Consensus 446 i~n~gne~l~~-v~F~~na 463 (539)
+..++| +.| |.|...+
T Consensus 84 Ve~sdD--~~f~leFyc~~ 100 (119)
T 3dl3_A 84 IELSDD--AQFNINFWSDQ 100 (119)
T ss_dssp EEECTT--CEEEEEEEECC
T ss_pred EEECCC--eEEEEEEEECc
Confidence 996543 555 5676554
No 378
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=38.48 E-value=43 Score=34.38 Aligned_cols=52 Identities=6% Similarity=0.036 Sum_probs=42.4
Q ss_pred EeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCc----eeeecCCCcEEEeC
Q 039441 205 ILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERR----ESFNMEHGDVISVP 256 (539)
Q Consensus 205 il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~----~~~~v~~GDV~~iP 256 (539)
+.+..++.++.-.--.++.++||++|.+.+....+++. ....+.+||++--.
T Consensus 67 ~~~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe~ 122 (469)
T 1o7f_A 67 YENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGES 122 (469)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECGG
T ss_pred EEEECCCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcchh
Confidence 34558999888887888999999999999999887763 46788999998543
No 379
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=37.52 E-value=42 Score=30.66 Aligned_cols=46 Identities=9% Similarity=0.093 Sum_probs=36.0
Q ss_pred EeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEE
Q 039441 205 ILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVI 253 (539)
Q Consensus 205 il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~ 253 (539)
+.+..++.++.-.--.++.++||++|.+.+.. ++.....+.+||++
T Consensus 32 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~---~~~~~~~~~~g~~f 77 (246)
T 3of1_A 32 EKSVPKGATIIKQGDQGDYFYVVEKGTVDFYV---NDNKVNSSGPGSSF 77 (246)
T ss_dssp EEEECTTCEEECTTCCCCEEEEEEECCEEEES---TTSCCEEECTTCEE
T ss_pred eEEECCCCEEEecCCCCCEEEEEEeeEEEEEE---CCEEEEecCCCCee
Confidence 44558998888777788999999999998764 33456777888877
No 380
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=37.17 E-value=1.2e+02 Score=29.87 Aligned_cols=69 Identities=14% Similarity=0.255 Sum_probs=47.1
Q ss_pred eeeEEEeeeCCCeeeccccc-CCCcEEEEEec-eEEEEEEeCC----------------Cce------eeecCCCcEEEe
Q 039441 200 NYRLAILEANPSTLVVPHHS-DAETILVLLKG-KGVITLVSHE----------------RRE------SFNMEHGDVISV 255 (539)
Q Consensus 200 ~~Rl~il~l~P~~l~lPh~~-dA~~~~yV~~G-~g~i~~v~pg----------------~~~------~~~v~~GDV~~i 255 (539)
.|--.+|-+.|+-..-.|+| .-.+=+++..| ..+|.+...+ ... .-.|.+|+-|.|
T Consensus 105 ~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 105 CYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICL 184 (246)
T ss_dssp CEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEE
T ss_pred cceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEec
Confidence 57777888899888888844 44444455554 4444444432 122 236899999999
Q ss_pred CCCCeEEEEecCC
Q 039441 256 PAGTTYYLSNQDN 268 (539)
Q Consensus 256 PaG~~h~i~N~g~ 268 (539)
|+|+-||++.-++
T Consensus 185 ~Pg~~H~F~ae~g 197 (246)
T 3kmh_A 185 PPGLYHSFWAEAG 197 (246)
T ss_dssp CTTEEEEEEECTT
T ss_pred CCCCEEEEEecCC
Confidence 9999999999764
No 381
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=33.36 E-value=49 Score=31.58 Aligned_cols=51 Identities=16% Similarity=0.197 Sum_probs=39.8
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEe-CCCc--eeeecCCCcEE
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKGVITLVS-HERR--ESFNMEHGDVI 253 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~-pg~~--~~~~v~~GDV~ 253 (539)
+.+....++.++...--.++.+++|++|.+.+.... +++. ....+.+||++
T Consensus 180 ~~~~~~~~g~~I~~~G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 180 LEETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp CEEEEECTTCEEECTTCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred ccEEEECCCCEEEeCCCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 345566899988888778899999999999999887 3333 35678888887
No 382
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=32.20 E-value=65 Score=27.08 Aligned_cols=31 Identities=10% Similarity=-0.114 Sum_probs=20.4
Q ss_pred eEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEE
Q 039441 425 KISANLSPGVVFIIPPGHPIALVASPNEKLLT 456 (539)
Q Consensus 425 ~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~ 456 (539)
.+...|+.||.+++|.....-+. .+++...+
T Consensus 54 ~~p~~VkvGD~Vl~~ky~Gtevk-~dg~ey~i 84 (95)
T 3nx6_A 54 LHAPVVKVGDKVIYGQYAGSSYK-SEGVEYKV 84 (95)
T ss_dssp EECCSCCTTCEEEECTTCSEEEE-ETTEEEEE
T ss_pred EEccccCCCCEEEECCcCCeEEE-ECCEEEEE
Confidence 45568999999999986655443 33443433
No 383
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=30.74 E-value=26 Score=31.77 Aligned_cols=122 Identities=15% Similarity=0.127 Sum_probs=73.8
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeC
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIP 439 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVP 439 (539)
+....+.+|.++...= -.++.+.||++|...+....++|. ......+.+||+|-..
T Consensus 32 ~~~~~~~~g~~i~~~g-~~~~~~y~i~~G~v~~~~~~~~G~-----------------------~~~~~~~~~g~~~G~~ 87 (227)
T 3dkw_A 32 SDLVNLDKGAYVFRQG-EPAHAFYYLISGCVKIYRLTPEGQ-----------------------EKILEVTNERNTFAEA 87 (227)
T ss_dssp CEEEECCTTEEEECTT-SBCCEEEEEEESCEECCBCCGGGC-----------------------CBCCCEECTTEEESCT
T ss_pred CEEEEECCCCEEEcCC-CccceEEEEEeCEEEEEEECCCCC-----------------------EEEEEEcCCCCEeeeH
Confidence 5667788888764432 357889999999999888777652 2344678999998643
Q ss_pred C-----C-CeEEEEcCCCCcEEEEEEeecC------CCCccc--------------------------------cc---c
Q 039441 440 P-----G-HPIALVASPNEKLLTVGFSLNA------RNNQRN--------------------------------FL---A 472 (539)
Q Consensus 440 a-----G-~~h~i~n~gne~l~~v~F~~na------~n~~~~--------------------------------fL---A 472 (539)
. . +++.+.+..+ ..++.+.... .++... +| +
T Consensus 88 ~~~~~~~~~~~~~~a~~~--~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~ 165 (227)
T 3dkw_A 88 MMFMDTPNYVATAQAVVP--SQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLA 165 (227)
T ss_dssp TTTTTCSBCSSCEEESSC--CEEEEEESHHHHHHHSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCceEEEEcCc--EEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhh
Confidence 2 2 4556666644 4444433221 122100 00 0
Q ss_pred -----ccchhcccCcHHHHHHHcCCCHHHHHHhhcCCCCc
Q 039441 473 -----GKINIMNQVERETMEVAFNVPARLIERVFGTNPKE 507 (539)
Q Consensus 473 -----G~~svL~~~p~evLa~AF~vs~e~v~kL~~~q~e~ 507 (539)
+...+.-.++.+-||..+|++.+++.++++.=.+.
T Consensus 166 ~~~~~~~~~~~~~~t~~~lA~~lg~sr~tvsR~l~~l~~~ 205 (227)
T 3dkw_A 166 AHAPGENCRVEIPVAKQLVAGHLSIQPETFSRIMHRLGDE 205 (227)
T ss_dssp CSSSSSCCCCCCCSCTHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred hhcCCCCeEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHC
Confidence 00012234678899999999999988887654333
No 384
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=28.51 E-value=96 Score=27.59 Aligned_cols=51 Identities=14% Similarity=0.201 Sum_probs=36.6
Q ss_pred eeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEE
Q 039441 358 AGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVF 436 (539)
Q Consensus 358 isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~ 436 (539)
..+....+.||-++.-.= -.++.+.||++|...+.. ++| + ....+.+||+|
T Consensus 92 ~~~~~~~~~~ge~I~~~G-~~~~~ly~I~~G~v~~~~--~~g------------------------~-~~~~l~~G~~f 142 (198)
T 2ptm_A 92 TLLEFEVFQPADYVIQEG-TFGDRMFFIQQGIVDIIM--SDG------------------------V-IATSLSDGSYF 142 (198)
T ss_dssp HHCEEEEECTTCEEECTT-SCCSEEEEEEECCEEEEC--TTS------------------------C-EEEEECTTCEE
T ss_pred HhccceeeCCCCEEEECC-CcCcEEEEEEeCEEEEEe--cCC------------------------e-EEEEecCCCEe
Confidence 346778888988864332 357789999999988764 443 2 34679999987
No 385
>1pp9_H Ubiquinol-cytochrome C reductase complex 11 kDa P; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: f.28.1.1 PDB: 1bgy_H* 1be3_H* 1l0n_H* 1ntk_H* 1ntm_H* 1ntz_H* 1nu1_H* 1l0l_H* 1ppj_H* 1sqb_H* 1sqp_H* 1sqq_H* 1sqv_H* 1sqx_H* 2a06_H* 2fyu_H* 2ybb_H* 1bcc_H* 2bcc_H* 3bcc_H* ...
Probab=28.42 E-value=89 Score=25.36 Aligned_cols=34 Identities=21% Similarity=0.397 Sum_probs=24.0
Q ss_pred cCCCCChHHHHH-HHH--HHHHHHHHHHHHHHHHHHH
Q 039441 41 NIVPQDPEEEYK-QCK--QLCEKQEAVQRRCERHYKE 74 (539)
Q Consensus 41 ~~~~~dp~~~~~-~c~--~~c~~q~~c~~~ce~~~~~ 74 (539)
++-+.||...|+ .|+ ..|...-.-.+.|.++-..
T Consensus 10 eEE~vDp~~~l~e~C~~~~~C~~~~~~y~~C~eRV~s 46 (78)
T 1pp9_H 10 EEELVDPLTTVREQCEQLEKCVKARERLELCDERVSS 46 (78)
T ss_dssp ---CCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHT
T ss_pred cccccChHHHHHHHHhcchhhHHHHHHHHHHHHHHhc
Confidence 456789977664 698 7899887777777777765
No 386
>3tgu_H Mitochondrial ubiquinol-cytochrome C reductase 11 protein, complex III subunit VIII...; cytochrome BC1, membrane protein, heme protein, rieske iron protein; HET: HEM WF3 UQ CDL PEE HEC BOG; 2.70A {Gallus gallus} PDB: 3cwb_H* 3h1i_H* 3h1h_H* 3h1k_H* 3h1l_H* 3h1j_H* 3l71_H* 3l72_H* 3l73_H* 3l74_H* 3l75_H* 3l70_H*
Probab=27.71 E-value=1.3e+02 Score=24.27 Aligned_cols=41 Identities=20% Similarity=0.321 Sum_probs=22.9
Q ss_pred hhhhhhccCCCCChHHHH-HHHH--HHHHHHHHHHHHHHHHHHH
Q 039441 34 REQFEDINIVPQDPEEEY-KQCK--QLCEKQEAVQRRCERHYKE 74 (539)
Q Consensus 34 ~~~~~~~~~~~~dp~~~~-~~c~--~~c~~q~~c~~~ce~~~~~ 74 (539)
|+.-+.+++.+.||...| +.|+ ..|...-.=.+.|.++-..
T Consensus 2 ~~~~~eeEeE~vDp~~~lre~C~~~~~C~~~~~~y~~C~eRV~~ 45 (77)
T 3tgu_H 2 RGSGEEEEEELVDPLTTIREHCEQTEKCVKARERLELCDARVSS 45 (77)
T ss_dssp -------CCCCCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCccccccccCHHHHHHHHHhccchhHHHHHHHHHHHHHHhc
Confidence 344455677789997776 5788 5788774444555555554
No 387
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=25.26 E-value=1.3e+02 Score=29.08 Aligned_cols=73 Identities=15% Similarity=0.159 Sum_probs=47.8
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEe-
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFII- 438 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vV- 438 (539)
+....+.+|-++.-- .-.++.+.+|++|..++....++|. .....+.+||+|=-
T Consensus 36 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~g~------------------------~~~~~~~~G~~fGe~ 90 (333)
T 4ava_A 36 VQPLRAAAGQVLLRQ-GEPAVSFLLISSGSAEVSHVGDDGV------------------------AIIARALPGMIVGEI 90 (333)
T ss_dssp CEEEEECTTCEEECT-TSBCCCEEEEEECCEEEEEECTTCC------------------------EEEEEECTTCEESHH
T ss_pred CeEEEECCCCEEEeC-CCcCCEEEEEEeeEEEEEEECCCCc------------------------EEEEEecCCCEeeHH
Confidence 556778888775332 2247789999999999999888762 24567899998821
Q ss_pred ----CCCCeEEEEcCCCCcEEEEEE
Q 039441 439 ----PPGHPIALVASPNEKLLTVGF 459 (539)
Q Consensus 439 ----PaG~~h~i~n~gne~l~~v~F 459 (539)
..-+.+.+.+..+ ..++.+
T Consensus 91 ~l~~~~~~~~~v~A~~~--~~~~~i 113 (333)
T 4ava_A 91 ALLRDSPRSATVTTIEP--LTGWTG 113 (333)
T ss_dssp HHHHTCBCSSEEEESSC--EEEEEE
T ss_pred HhcCCCCceEEEEEecC--EEEEEE
Confidence 1223445566533 444443
No 388
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=25.20 E-value=95 Score=29.52 Aligned_cols=169 Identities=14% Similarity=0.172 Sum_probs=89.1
Q ss_pred eeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEeccCCCCC
Q 039441 206 LEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLLQPVNTPG 285 (539)
Q Consensus 206 l~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~d~~n~pg 285 (539)
.+..|+.++.-.--.++.+++|++|.+.+.. ++.....+.+||++---+ .+.| .|.
T Consensus 65 ~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~---~g~~~~~~~~G~~fGe~~----ll~~-----------------~~~ 120 (299)
T 3shr_A 65 VEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK---EGVKLCTMGPGKVFGELA----ILYN-----------------CTR 120 (299)
T ss_dssp EEECTTCEEECTTCBCCCEEEEEESCEEEEE---TTEEEEEECTTCEESCSG----GGTT-----------------TBC
T ss_pred EEECCCCEEEcCCCcCceEEEEEEEEEEEEE---CCEEEEEeCCCCeeeHhH----HhcC-----------------CCC
Confidence 4458999888887788999999999998832 335566677777762110 0111 111
Q ss_pred CceeccccCccEEEcChhhhhhcCccccccCCCCCCCCcceecCCCCCcccCCCceEEEeCCcccccccccceeEEEEEE
Q 039441 286 QFRVQQRQQGTIKRASQEQLKALSHHASSRRRHGRGSTAPFNLLSRKPIYNNNFGRFFEATPKDYQQLQEIDAGVTYVEI 365 (539)
Q Consensus 286 ~f~~~~q~~G~Ivrv~~eql~~l~~~~~~~~~~~~~~~~~fnl~~~~p~~sn~~G~i~~~~~~~fP~L~~l~isva~v~L 365 (539)
.....-.....+..++.+.+..+-....... .....++...-+.+.+ ++.... ..+-..+....+
T Consensus 121 ~~tv~a~~~~~l~~i~~~~~~~i~~~~~~~~-----~~~~~~~l~~~~~f~~-------l~~~~l---~~l~~~~~~~~~ 185 (299)
T 3shr_A 121 TATVKTLVNVKLWAIDRQCFQTIMMRTGLIK-----HTEYMEFLKSVPTFQS-------LPEEIL---SKLADVLEETHY 185 (299)
T ss_dssp CSEEEESSCEEEEEECHHHHHHHHHHHHHHH-----HHHHHHHHTTSHHHHH-------SCHHHH---HHHTTTCEEEEE
T ss_pred CcEEEEcCCeEEEEEcHHHHHHHhhHhHHHH-----HHHHHHHHhhCHHhhh-------CCHHHH---HHHHHhccEEEE
Confidence 1111111223455555555543321100000 0001122222232221 122222 222233456677
Q ss_pred cCCceecceecCCCCEEEEEEeceEEEEEec-CCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEE
Q 039441 366 NQGGMMVPHYNSKATTIVLVVEGRGRFEMGG-PLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFI 437 (539)
Q Consensus 366 ~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~-p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~v 437 (539)
.+|.++.--= -.++.+.+|++|...+.... ++|. ......+.+||+|=
T Consensus 186 ~~g~~I~~~G-~~~~~~yiI~~G~v~~~~~~~~~g~-----------------------~~~~~~l~~G~~fG 234 (299)
T 3shr_A 186 ENGEYIIRQG-ARGDTFFIISKGKVNVTREDSPNED-----------------------PVFLRTLGKGDWFG 234 (299)
T ss_dssp CTTCEEECTT-CEECEEEEEEESEEEEEECCSSSCC-----------------------CEEEEEEETTCEEC
T ss_pred CCCCEEEeCC-CCCCEEEEEEeeEEEEEEecCCCCc-----------------------ceEEEEcCCCCEeC
Confidence 7777654332 24678999999999998887 4442 24457899999883
No 389
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=24.07 E-value=1.8e+02 Score=24.44 Aligned_cols=34 Identities=9% Similarity=0.175 Sum_probs=26.1
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEE
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEM 394 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~v 394 (539)
+....+.+|.++.-- .-.++.+.+|++|...+..
T Consensus 61 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~ 94 (154)
T 3pna_A 61 MFPVSFIAGETVIQQ-GDEGDNFYVIDQGEMDVYV 94 (154)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEESCEEEEE
T ss_pred ceEEEECCCCEEEeC-CCCCCeEEEEEecEEEEEE
Confidence 566888888886433 2357899999999999876
No 390
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=22.95 E-value=72 Score=32.27 Aligned_cols=49 Identities=8% Similarity=0.130 Sum_probs=38.7
Q ss_pred EeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCCCc---eeeecCCCcEE
Q 039441 205 ILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHERR---ESFNMEHGDVI 253 (539)
Q Consensus 205 il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg~~---~~~~v~~GDV~ 253 (539)
.....++.++.-.--.++.+++|++|.+.+....+++. ....+.+||++
T Consensus 273 ~~~~~~ge~I~~eGd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 273 PVQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCCBCSSCBSSCTTSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred hccCCCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 34568888887777788999999999999998876543 35678899987
No 391
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=22.56 E-value=96 Score=31.87 Aligned_cols=51 Identities=14% Similarity=0.167 Sum_probs=37.3
Q ss_pred EEEeeeCCCeeecccccCCCcEEEEEeceEEEEEEeCC------Cc--eeeecCCCcEE
Q 039441 203 LAILEANPSTLVVPHHSDAETILVLLKGKGVITLVSHE------RR--ESFNMEHGDVI 253 (539)
Q Consensus 203 l~il~l~P~~l~lPh~~dA~~~~yV~~G~g~i~~v~pg------~~--~~~~v~~GDV~ 253 (539)
+......++.+++..--.++.+++|++|.+.|....++ +. ....+.+||++
T Consensus 290 l~~~~~~~Ge~I~~eGd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEECTTSCCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 44556689998888777889999999999999887664 22 35677888876
No 392
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=22.24 E-value=1.4e+02 Score=25.20 Aligned_cols=32 Identities=16% Similarity=0.195 Sum_probs=20.0
Q ss_pred eEEeeeCCCcEEEeCCCCeEEEEcCCCCcEEEE
Q 039441 425 KISANLSPGVVFIIPPGHPIALVASPNEKLLTV 457 (539)
Q Consensus 425 ~~~~~L~~GDV~vVPaG~~h~i~n~gne~l~~v 457 (539)
.....|+.||.++++.....-+. .+++...++
T Consensus 57 ~~p~~VkvGD~Vlf~ky~Gtevk-~dgeey~i~ 88 (99)
T 1p3h_A 57 RIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLIL 88 (99)
T ss_dssp EECCSCCTTCEEEEECTTCEEEE-ETTEEEEEE
T ss_pred EEccccCCCCEEEECCcCCeEEE-ECCEEEEEE
Confidence 34457999999999986554433 334434333
No 393
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=21.33 E-value=2.3e+02 Score=23.13 Aligned_cols=32 Identities=9% Similarity=0.235 Sum_probs=24.3
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEE
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRF 392 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v 392 (539)
+....+.+|.++.-- .-.++.+.+|++|...+
T Consensus 46 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~ 77 (139)
T 3ocp_A 46 MYPVEYGKDSCIIKE-GDVGSLVYVMEDGKVEV 77 (139)
T ss_dssp CEEEEECSSCEEECT-TSCCCEEEEEEECCEEE
T ss_pred cEEEecCCCCEEEeC-CCcCCEEEEEEeCEEEE
Confidence 466788888876433 23578999999999988
No 394
>2rqx_A PMRD, polymyxin B resistance protein; signaling protein; NMR {Klebsiella pneumoniae}
Probab=21.23 E-value=99 Score=25.54 Aligned_cols=58 Identities=16% Similarity=0.316 Sum_probs=37.7
Q ss_pred cCCCcEEEEEeceEEEEEEeCCCceeeecCCCcEEEeCCCCeEEEEecCCCceEEEEEEe
Q 039441 219 SDAETILVLLKGKGVITLVSHERRESFNMEHGDVISVPAGTTYYLSNQDNVDRLHVAKLL 278 (539)
Q Consensus 219 ~dA~~~~yV~~G~g~i~~v~pg~~~~~~v~~GDV~~iPaG~~h~i~N~g~~e~L~iv~l~ 278 (539)
..++..+.|++|.++ -+|-+-..-++.|++||++. |---+.|+.|......+.|+...
T Consensus 12 kk~~~~~lvL~gGaL-kMIAEv~s~~~~~k~GDlLs-PL~dA~YCiNrn~~~tvKii~As 69 (89)
T 2rqx_A 12 ASASLCRVVLQSGAL-EMIAEIEACRLRLREGDKLT-PLADARYCLNNNPTQTLKIRNAT 69 (89)
T ss_dssp SSSSCEEEEEEETTE-EEEEEEECSCCCCCTTCEEE-ECSSSCEEETTCTTSEEEEEEEE
T ss_pred cccCeEEEEEeCchH-HHHHHHhhcccccccccccc-cchhhhhhhcCCCCceEEEEecc
Confidence 455666677766543 33332222267899999975 66667899998877777766543
No 395
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=20.82 E-value=1.6e+02 Score=29.93 Aligned_cols=77 Identities=13% Similarity=0.102 Sum_probs=50.7
Q ss_pred EEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCcEEEeC
Q 039441 360 VTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGVVFIIP 439 (539)
Q Consensus 360 va~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GDV~vVP 439 (539)
+....+.+|.++---= -.++.+.||++|...+....++|.. + ......+.+||+|--.
T Consensus 65 ~~~~~~~~g~~i~~~G-d~~~~~y~i~~G~v~v~~~~~~g~~--------~-------------~~~~~~~~~G~~fGe~ 122 (469)
T 1o7f_A 65 GYYENLEKGITLFRQG-DIGTNWYAVLAGSLDVKVSETSSHQ--------D-------------AVTICTLGIGTAFGES 122 (469)
T ss_dssp CEEEEECTTCEEECTT-SBCCEEEEEEESCEEEEECSSSCGG--------G-------------CEEEEEECTTCEECGG
T ss_pred ceEEEECCCCEEEeCC-CCCCcEEEEEeeEEEEEEecCCCCC--------c-------------ceEEEEccCCCCcchh
Confidence 5567888888764322 3578899999999999998887621 0 1455789999998542
Q ss_pred ----CCCeEEEEcCCCCcEEEEEEe
Q 039441 440 ----PGHPIALVASPNEKLLTVGFS 460 (539)
Q Consensus 440 ----aG~~h~i~n~gne~l~~v~F~ 460 (539)
.-+++.+.+..+ ..++.+.
T Consensus 123 ~l~~~~~~~tv~A~~~--~~l~~i~ 145 (469)
T 1o7f_A 123 ILDNTPRHATIVTRES--SELLRIE 145 (469)
T ss_dssp GGGTCBCSSEEEESSS--EEEEEEE
T ss_pred hhCCCCccceEEEccc--eeEEEEc
Confidence 223455666543 4444443
No 396
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=20.22 E-value=3.4e+02 Score=27.09 Aligned_cols=71 Identities=15% Similarity=0.065 Sum_probs=52.2
Q ss_pred ccceeEEEEEEcCCceecceecCCCCEEEEEEeceEEEEEecCCCCccchhhhhhhhHHHHHHhhhcceeeEEeeeCCCc
Q 039441 355 EIDAGVTYVEINQGGMMVPHYNSKATTIVLVVEGRGRFEMGGPLSSRWSQESQREQQEEEEEEESSRELQKISANLSPGV 434 (539)
Q Consensus 355 ~l~isva~v~L~pGgm~~PHwhpnA~ei~yV~~G~g~v~vV~p~gs~~s~~~~~g~~~~~~~e~~~~~y~~~~~~L~~GD 434 (539)
+-+-+-.+|.+.|+=-..|-.| .|+.=.||++|+..+ ++ .+|.+|+
T Consensus 88 d~GaSTl~V~fpp~~~~P~Gi~-~ad~E~fVL~G~i~~-----G~----------------------------~~l~~h~ 133 (303)
T 2qdr_A 88 DSGASTSRVVLPPKFEAPSGIF-TADLEIFVIKGAIQL-----GE----------------------------WQLNKHS 133 (303)
T ss_dssp TTSCEEEEEEECTTCEECCBEE-SSCEEEEEEESEEEE-----TT----------------------------EEECTTE
T ss_pred CCCcceEEEEecCCCCCCCccc-ccceEEEEEEeEEEe-----CC----------------------------EEecCCc
Confidence 3467778888988888888887 555559999999865 11 3588999
Q ss_pred EEEeCCCCeEE-EEcCCCCcEEEEEE
Q 039441 435 VFIIPPGHPIA-LVASPNEKLLTVGF 459 (539)
Q Consensus 435 V~vVPaG~~h~-i~n~gne~l~~v~F 459 (539)
-+++|+|...= +...|+++..+|-|
T Consensus 134 Y~f~PaGV~~~~~kv~~~~g~~iL~f 159 (303)
T 2qdr_A 134 YSFIPAGVRIGSWKVLGGEEAEILWM 159 (303)
T ss_dssp EEEECTTCCBCCEEEETTSCEEEEEE
T ss_pred eEEecCCCccCceeecCCCCcEEEEE
Confidence 99999998432 23335677887777
Done!