Query 039447
Match_columns 307
No_of_seqs 127 out of 235
Neff 3.5
Searched_HMMs 29240
Date Mon Mar 25 16:35:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039447.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039447hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ion_A PDCD4, programmed cell 66.7 4.5 0.00015 33.9 3.6 48 248-297 3-50 (152)
2 2nsz_A Programmed cell death p 66.5 4.5 0.00015 32.8 3.4 46 249-296 2-47 (129)
3 2rg8_A Programmed cell death p 66.1 6.3 0.00022 33.4 4.4 48 249-298 5-52 (165)
4 2c0s_A Conserved domain protei 38.2 33 0.0011 25.4 3.8 33 252-284 12-50 (64)
5 2bzb_A Conserved domain protei 36.8 25 0.00085 25.9 2.9 35 252-286 12-52 (62)
6 3bqs_A Uncharacterized protein 33.3 66 0.0023 25.1 5.0 44 255-299 14-59 (93)
7 3eiq_C Programmed cell death p 32.0 40 0.0014 32.1 4.2 46 251-298 51-96 (358)
8 2zzd_C Thiocyanate hydrolase s 30.7 41 0.0014 31.1 3.9 49 249-297 23-74 (243)
9 2zu6_B Programmed cell death p 30.1 45 0.0015 30.9 4.2 48 248-297 160-207 (307)
10 1ugp_A NitrIle hydratase alpha 29.1 55 0.0019 29.5 4.4 50 248-297 14-64 (203)
11 1ug3_A EIF4GI, eukaryotic prot 28.8 45 0.0015 30.6 3.9 47 249-297 6-52 (339)
12 3a8g_A NitrIle hydratase subun 27.4 61 0.0021 29.3 4.3 50 247-296 16-66 (207)
13 3mab_A Uncharacterized protein 25.2 56 0.0019 25.6 3.3 28 255-282 14-43 (93)
14 2o7g_A Probable RNA polymerase 24.7 71 0.0024 23.6 3.7 39 266-304 20-67 (112)
15 3hht_B NitrIle hydratase beta 23.2 92 0.0031 28.2 4.8 35 247-281 70-104 (229)
16 3eiq_C Programmed cell death p 21.6 94 0.0032 29.5 4.7 49 246-296 209-257 (358)
No 1
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=66.67 E-value=4.5 Score=33.91 Aligned_cols=48 Identities=17% Similarity=0.218 Sum_probs=37.9
Q ss_pred ChHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHhcCCCcchhHHHHHHHH
Q 039447 248 DPQRDFRESMVEMIVENNLRGSQDLEDLLACYFSLNSNEYHEVIVKAFEQ 297 (307)
Q Consensus 248 DPy~DFR~SM~EMI~e~~i~~~~dLeeLL~CYLsLNs~~~H~~Iv~AF~d 297 (307)
.|-.+|.+.|..+|.|-= ...|++|-..|.=.||.+.+|..+|.-.+.
T Consensus 3 ~~~eel~kki~~lL~EY~--~~~D~~EA~~cl~EL~~p~f~~e~V~~~i~ 50 (152)
T 2ion_A 3 QPVNHLVKEIDMLLKEYL--LSGDISEAEHCLKELEVPHFHHELVYEAIV 50 (152)
T ss_dssp CCCCHHHHHHHHHHHHHH--HHCCHHHHHHHHHHHTCGGGHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHH--hCCCHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 577899999999998742 235899999999999998888766654443
No 2
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=66.48 E-value=4.5 Score=32.79 Aligned_cols=46 Identities=17% Similarity=0.232 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHhcCCCcchhHHHHHHH
Q 039447 249 PQRDFRESMVEMIVENNLRGSQDLEDLLACYFSLNSNEYHEVIVKAFE 296 (307)
Q Consensus 249 Py~DFR~SM~EMI~e~~i~~~~dLeeLL~CYLsLNs~~~H~~Iv~AF~ 296 (307)
|-.+|.+.|..+|.|-= ...|++|-..|.=.||.+.+|..+|.-.+
T Consensus 2 p~eel~kki~~ll~EY~--~~~D~~Ea~~cl~eL~~p~f~~e~V~~~i 47 (129)
T 2nsz_A 2 PVNHLVKEIDMLLKEYL--LSGDISEAEHCLKELEVPHFHHELVYEAI 47 (129)
T ss_dssp CCCHHHHHHHHHHHHHH--HHCCHHHHHHHHHHHTCGGGHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHH--cCCCHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 66789999999988742 24689999999999999888876665433
No 3
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=66.13 E-value=6.3 Score=33.39 Aligned_cols=48 Identities=17% Similarity=0.189 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHhcCCCcchhHHHHHHHHH
Q 039447 249 PQRDFRESMVEMIVENNLRGSQDLEDLLACYFSLNSNEYHEVIVKAFEQV 298 (307)
Q Consensus 249 Py~DFR~SM~EMI~e~~i~~~~dLeeLL~CYLsLNs~~~H~~Iv~AF~di 298 (307)
+.++|++.+..+|.|- ....|++|.+.|.=.||++.+|..+|+..+..
T Consensus 5 s~ee~~kk~~~ii~EY--f~~~D~~Ea~~~l~eL~~p~~~~~~V~~~I~~ 52 (165)
T 2rg8_A 5 DERAFEKTLTPIIQEY--FEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSL 52 (165)
T ss_dssp SHHHHHHHHHHHHHHH--HHHCCHHHHHHHHHHHTCSGGGGHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH--HcCCCHHHHHHHHHHhCCcccHHHHHHHHHHH
Confidence 4678999999999874 22358999999999999999999888876653
No 4
>2c0s_A Conserved domain protein; transferase, phosphatase, phosphorylation, sporulation, antithetical, negative regulator, spine; NMR {Bacillus anthracis} SCOP: a.30.7.1
Probab=38.24 E-value=33 Score=25.38 Aligned_cols=33 Identities=12% Similarity=0.329 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHhCCCCChh------hHHHHHHHHHhcCC
Q 039447 252 DFRESMVEMIVENNLRGSQ------DLEDLLACYFSLNS 284 (307)
Q Consensus 252 DFR~SM~EMI~e~~i~~~~------dLeeLL~CYLsLNs 284 (307)
.-|+-|.+.+...|+.+++ +|..||..|..+..
T Consensus 12 ~kR~eL~~l~~k~Gl~~~~vI~~SQeLD~LIn~Y~k~~~ 50 (64)
T 2c0s_A 12 AKKKELIYLVEKYGFTHHKVISFSQELDRLLNLLIELKT 50 (64)
T ss_dssp HHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578899999999998766 79999999987643
No 5
>2bzb_A Conserved domain protein; transferase, phosphatase, phosphorylation, sporulation, antithetical, negative, regulator, spine; NMR {Bacillus anthracis} SCOP: a.30.7.1
Probab=36.75 E-value=25 Score=25.93 Aligned_cols=35 Identities=11% Similarity=0.459 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHhCCCCChh------hHHHHHHHHHhcCCCc
Q 039447 252 DFRESMVEMIVENNLRGSQ------DLEDLLACYFSLNSNE 286 (307)
Q Consensus 252 DFR~SM~EMI~e~~i~~~~------dLeeLL~CYLsLNs~~ 286 (307)
.-|+-|.+.+...|+.+++ +|..||..|..+....
T Consensus 12 ~kR~eL~~l~~k~Gl~~~~vI~~SQeLD~LIn~Y~k~~~~~ 52 (62)
T 2bzb_A 12 NKKKELIQLVARHGLDHDKVLLFSRDLDKLINKFMNVKDKV 52 (62)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4578889999999987665 7999999999987653
No 6
>3bqs_A Uncharacterized protein; 10114F, NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.42A {Listeria monocytogenes str} PDB: 3bqt_A 3mab_A
Probab=33.28 E-value=66 Score=25.10 Aligned_cols=44 Identities=7% Similarity=0.237 Sum_probs=33.6
Q ss_pred HHHHHHHHhCCCCChhhHHHH--HHHHHhcCCCcchhHHHHHHHHHH
Q 039447 255 ESMVEMIVENNLRGSQDLEDL--LACYFSLNSNEYHEVIVKAFEQVW 299 (307)
Q Consensus 255 ~SM~EMI~e~~i~~~~dLeeL--L~CYLsLNs~~~H~~Iv~AF~diw 299 (307)
..|++|+..-||.+.++|.++ .++|+.|-....-..+ .+|-.|-
T Consensus 14 ~~~e~~L~~vGI~s~e~L~~~Ga~~ay~rL~~~~~~~c~-~~L~aL~ 59 (93)
T 3bqs_A 14 KVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSSVCM-SELYALE 59 (93)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHTTCTTCCH-HHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHhCCHHHHHHHHHHHCCCCCH-HHHHHHH
Confidence 468999999999999999876 7899999877444333 5555543
No 7
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=31.95 E-value=40 Score=32.08 Aligned_cols=46 Identities=15% Similarity=0.155 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhCCCCChhhHHHHHHHHHhcCCCcchhHHHHHHHHH
Q 039447 251 RDFRESMVEMIVENNLRGSQDLEDLLACYFSLNSNEYHEVIVKAFEQV 298 (307)
Q Consensus 251 ~DFR~SM~EMI~e~~i~~~~dLeeLL~CYLsLNs~~~H~~Iv~AF~di 298 (307)
.+|++-...+|.|- ....|++|.+.|.=.||.+.+|..+|+.++..
T Consensus 51 ee~~k~~~~ii~EY--f~~~d~~Ea~~~l~eL~~p~~~~~~v~~~I~~ 96 (358)
T 3eiq_C 51 TAFEKTLTPIIQEY--FEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSL 96 (358)
T ss_dssp HHHHHHHHHHHHHH--HHHCCHHHHHHHHHTTTCCGGGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--hcCCCHHHHHHHHHHhCCchhHHHHHHHHHHH
Confidence 69999998888874 33468999999999999999999888876654
No 8
>2zzd_C Thiocyanate hydrolase subunit gamma; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dxc_C* 2dxb_C 2dd5_C* 2dd4_C*
Probab=30.73 E-value=41 Score=31.11 Aligned_cols=49 Identities=18% Similarity=0.229 Sum_probs=36.5
Q ss_pred hHHHHHH---HHHHHHHhCCCCChhhHHHHHHHHHhcCCCcchhHHHHHHHH
Q 039447 249 PQRDFRE---SMVEMIVENNLRGSQDLEDLLACYFSLNSNEYHEVIVKAFEQ 297 (307)
Q Consensus 249 Py~DFR~---SM~EMI~e~~i~~~~dLeeLL~CYLsLNs~~~H~~Iv~AF~d 297 (307)
+..+|-. -+++++.|+|+.+.++|+.++..|-...+..=-+++-+|.+|
T Consensus 23 ~~~~~~~~~~AL~~lL~eKGli~~~~~~~~~~~~e~~gP~~GArvVArAW~D 74 (243)
T 2zzd_C 23 EVSDFEILEMAVRELAIEKGLFSAEDHRVWKDYVHTLGPLPAARLVAKAWLD 74 (243)
T ss_dssp CCCHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHCCSHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCcceEEEeecCC
Confidence 4455555 899999999999999999999999999433334445555443
No 9
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=30.11 E-value=45 Score=30.85 Aligned_cols=48 Identities=15% Similarity=0.166 Sum_probs=38.6
Q ss_pred ChHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHhcCCCcchhHHHHHHHH
Q 039447 248 DPQRDFRESMVEMIVENNLRGSQDLEDLLACYFSLNSNEYHEVIVKAFEQ 297 (307)
Q Consensus 248 DPy~DFR~SM~EMI~e~~i~~~~dLeeLL~CYLsLNs~~~H~~Iv~AF~d 297 (307)
-|-.+|++-|.++|.|-- ...|++|-..|.-.||.+.+|..+|+..+.
T Consensus 160 ~~~eelkkki~~lL~EY~--~~~D~~EA~~ci~EL~~p~f~~e~V~~ai~ 207 (307)
T 2zu6_B 160 QSVNHLVKEIDMLLKEYL--LSGDISEAEHCLKELEVPHFHHELVYEAII 207 (307)
T ss_dssp SCHHHHHHHHHHHHHHHH--HHCCHHHHHHHHHHHCCGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--cCCCHHHHHHHHHHcCCCcchHHHHHHHHH
Confidence 467899999999998752 235999999999999998888777665443
No 10
>1ugp_A NitrIle hydratase alpha subunit; complex, N-butyric acid, non-corrin cobalt, hydration, lyase; HET: BUA; 1.63A {Pseudonocardia thermophila} SCOP: d.149.1.1 PDB: 1ire_A 1ugr_A 1ugq_A 1ugs_A
Probab=29.09 E-value=55 Score=29.53 Aligned_cols=50 Identities=14% Similarity=0.216 Sum_probs=39.5
Q ss_pred ChHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHhc-CCCcchhHHHHHHHH
Q 039447 248 DPQRDFRESMVEMIVENNLRGSQDLEDLLACYFSL-NSNEYHEVIVKAFEQ 297 (307)
Q Consensus 248 DPy~DFR~SM~EMI~e~~i~~~~dLeeLL~CYLsL-Ns~~~H~~Iv~AF~d 297 (307)
++..++-.-+++++.|+|+.+.++++.++..|-.. .+..=-++|-+|..|
T Consensus 14 ~~~~~r~~AL~~lL~eKGli~~~~id~~~~~~e~~~gP~nGA~vVArAW~D 64 (203)
T 1ugp_A 14 KEITARVKALESMLIEQGILTTSMIDRMAEIYENEVGPHLGAKVVVKAWTD 64 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHTSSHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHhcccCCcccCeeeehhhCC
Confidence 35778889999999999999999999999999988 444444555555444
No 11
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=28.76 E-value=45 Score=30.59 Aligned_cols=47 Identities=15% Similarity=0.220 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHhcCCCcchhHHHHHHHH
Q 039447 249 PQRDFRESMVEMIVENNLRGSQDLEDLLACYFSLNSNEYHEVIVKAFEQ 297 (307)
Q Consensus 249 Py~DFR~SM~EMI~e~~i~~~~dLeeLL~CYLsLNs~~~H~~Iv~AF~d 297 (307)
+-.+|.+.|..+|.|- ....|++|.+.|.-.||.+.+|..+|.....
T Consensus 6 s~ee~~k~~~~ll~Ey--~~~~d~~Ea~~ci~el~~p~~~~~~v~~~i~ 52 (339)
T 1ug3_A 6 SEEELEKKSKAIIEEY--LHLNDMKEAVQCVQELASPSLLFIFVRHGVE 52 (339)
T ss_dssp HHHHHHHHHHHHHHHH--HHHCCHHHHHHHHHTTCCGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH--HhCCCHHHHHHHHHHcCCcccHHHHHHHHHH
Confidence 3467888888888763 1224788999999999999777666554443
No 12
>3a8g_A NitrIle hydratase subunit alpha; Fe, iron, lyase, metal-binding, oxidation; 1.11A {Rhodococcus erythropolis} PDB: 3a8h_A 3a8l_A 3a8o_A 2zpb_A 2ahj_A 2cyz_A 2cz6_A 2cz7_A 2d0q_A 2cz1_A 2zpe_A 2zpf_A 2zpg_A 2zph_A 2zpi_A 2qdy_A 3a8m_A 2zcf_A 1ahj_A 2cz0_A*
Probab=27.37 E-value=61 Score=29.34 Aligned_cols=50 Identities=14% Similarity=0.090 Sum_probs=39.3
Q ss_pred CChHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHhcCCCcc-hhHHHHHHH
Q 039447 247 FDPQRDFRESMVEMIVENNLRGSQDLEDLLACYFSLNSNEY-HEVIVKAFE 296 (307)
Q Consensus 247 ~DPy~DFR~SM~EMI~e~~i~~~~dLeeLL~CYLsLNs~~~-H~~Iv~AF~ 296 (307)
.++..++-.-+++++.|+|+.+.++++.++..|-..=++.. -++|-+|..
T Consensus 16 ~~~~~~r~~Al~~ll~ekG~i~~~~~~~~~~~~e~~~~P~~GA~vVArAW~ 66 (207)
T 3a8g_A 16 QAPVSDRAWALFRALDGKGLVPDGYVEGWKKTFEEDFSPRRGAELVARAWT 66 (207)
T ss_dssp CCCHHHHHHHHHHHHHTTTCSCTTHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHcCCCCHHHHHHHHHHHhcccCCccccEEeeehhC
Confidence 45678999999999999999999999999999998833333 344445443
No 13
>3mab_A Uncharacterized protein; NYSGXRC, PSI-2, structural genomics; 1.42A {Listeria monocytogenes} PDB: 3bqt_A
Probab=25.22 E-value=56 Score=25.59 Aligned_cols=28 Identities=7% Similarity=0.392 Sum_probs=24.8
Q ss_pred HHHHHHHHhCCCCChhhHHHH--HHHHHhc
Q 039447 255 ESMVEMIVENNLRGSQDLEDL--LACYFSL 282 (307)
Q Consensus 255 ~SM~EMI~e~~i~~~~dLeeL--L~CYLsL 282 (307)
..|++|..+-||.+.++|.++ .+||+.|
T Consensus 14 ~~~e~~L~~~GI~t~~~Lr~~Ga~~ay~rL 43 (93)
T 3mab_A 14 KVLEQDLIKAGIKTPVELKDVGSKEAFLRI 43 (93)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHhCCHHHHHHHH
Confidence 368999999999999999987 7889887
No 14
>2o7g_A Probable RNA polymerase sigma-C factor; sigma factor, transcription regulation, -10 element recognit domain, transcription; 2.70A {Mycobacterium tuberculosis}
Probab=24.73 E-value=71 Score=23.56 Aligned_cols=39 Identities=10% Similarity=0.110 Sum_probs=25.4
Q ss_pred CCChhhHHHHHHHHHh---------cCCCcchhHHHHHHHHHHHHhhc
Q 039447 266 LRGSQDLEDLLACYFS---------LNSNEYHEVIVKAFEQVWLDITN 304 (307)
Q Consensus 266 i~~~~dLeeLL~CYLs---------LNs~~~H~~Iv~AF~diw~~L~~ 304 (307)
-.+.+.+++|+..|-. .|...--+++.++|..+|..+..
T Consensus 20 ~gd~~a~~~l~~~~~~~l~~~~~~~~~~~~aeD~vQe~fl~~~~~~~~ 67 (112)
T 2o7g_A 20 KGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLRAIGAIPR 67 (112)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHGGG
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3355566666543311 45566678899999999987654
No 15
>3hht_B NitrIle hydratase beta subunit; alpha and beta proteins (A+B), lyase; 1.16A {Geobacillus pallidus} SCOP: b.34.4.4 PDB: 2dpp_B 1v29_B
Probab=23.24 E-value=92 Score=28.21 Aligned_cols=35 Identities=6% Similarity=0.135 Sum_probs=31.4
Q ss_pred CChHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHh
Q 039447 247 FDPQRDFRESMVEMIVENNLRGSQDLEDLLACYFS 281 (307)
Q Consensus 247 ~DPy~DFR~SM~EMI~e~~i~~~~dLeeLL~CYLs 281 (307)
.+=|+-....|+.|++++|+.+.+||++..+-||.
T Consensus 70 ~~YYe~WL~ale~lLvekGvit~~EL~~r~~~~~~ 104 (229)
T 3hht_B 70 SSYYGHWIATVAYNLVDTGVLDEKELDERTEVFSK 104 (229)
T ss_dssp SCHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhcc
Confidence 33477789999999999999999999999999996
No 16
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=21.58 E-value=94 Score=29.50 Aligned_cols=49 Identities=16% Similarity=0.209 Sum_probs=38.4
Q ss_pred cCChHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHhcCCCcchhHHHHHHH
Q 039447 246 SFDPQRDFRESMVEMIVENNLRGSQDLEDLLACYFSLNSNEYHEVIVKAFE 296 (307)
Q Consensus 246 S~DPy~DFR~SM~EMI~e~~i~~~~dLeeLL~CYLsLNs~~~H~~Iv~AF~ 296 (307)
...|-.++++-|...|.|-- ...|++|-..|.-.||.+.+|..+|.-.+
T Consensus 209 ~~~~veelkkki~~lL~EY~--~s~D~~EA~~ci~EL~~p~fhhe~V~~av 257 (358)
T 3eiq_C 209 GQQPVNHLVKEIDMLLKEYL--LSGDISEAEHCLKELEVPHFHHELVYEAI 257 (358)
T ss_dssp SSSCHHHHHHHHHHHHHHHH--HHCCHHHHHHHHHHHCCTTCHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHhc--cCCCHHHHHHHHHHccCCcchHHHHHHHH
Confidence 34688999999998888753 35699999999999999987766655333
Done!