Your job contains 1 sequence.
>039448
MDAFEMEDGTAFSIGNDVDLCSSILSRFSSSAQEEHQHLCAAIGAMSQELKDQNLPLTPI
SYFGATCSSLDRLLSSPDPDRSSHIIGSLSTILSLLLPKISVAVLKKKGDFLTDLVVRVV
RLSSVTAGAVASGLTSLSRLLTGRGRVNWSDVSQLYGVVLAFMTDSRLKVRRQSHLCVRE
ILLSLQGTLVLAPASEAITNMFEKFLLLAGGSNTSADEKPKGAQEVLYVLDALKECLPLM
STKYTAVILKYFKTLLELRQPLVTRRVTDALNVICLHPTLEVSAEALLDLLCSLALSVST
NETSADAMTFTARLLNVGMIKIYSINREICSTKLPIVFNALKDILASEHEEAIFAATEAL
KNLINACIDESLIKQGVDQITNVNSDARKSGPTVIEKICATVESLLDYHYSAVWDMAFQI
VSTMFDKLGTYSSYFMRGALKNLADMQNLPDEDFPYRKQLHECVGSAVGSMGPETFLCLL
PLKLEASDLSEVNVWLFPILKQYIIGARLNFFMEKLLGMAKLIGQKSQKFELEGRVFSSR
SADALVYSLWSLLPSFCNYPVDTAESFMDLAGVLCSALHEENDIRGIICSSLQNLIQQNK
KTLEGKNDLSNVVISTASQRAMAHYTTKVATDNLNVLKSSARELLSILSRIFLESAKDEG
GCLQSTIGDFASIADKEIVTRLFKRTMHRLLEATQEAGKTKSTRKSNSMQIDDSSNESSP
DFMRARLFDLALSLLPGLNAKEIDVLFVAIKPALQDDEGLIQKKAYKVLSTILRKCDGFL
SSRLEELLGLMIEVLPSCHFSAKRHRLDCLYFIIAHVSKDDSEQRRSYILSSFLTEIILA
LKEANKRTRNRAYDVLVQIGRAFGDEENGGGKENLYQFFNMVAGGLAGESPHMISAAVKG
LARLAYEFSDLVSNVYKLLPSTFLLLQRKNREIIKANLGLLKVLVAKSHAEGLQIHLASM
VEGLLKWQDDTKNQFKSKIKLLLEMLVKKCGLDAVKAVMPEEHMKLLKNIRKIKERKERK
LATKTEDTKSHFSKTTTSRLSRWNHTKIFSDFGDEGSEGSDAEYMDVGTVSGQGSKASPQ
LKSKVSTLRLKKKRKADKILPEDLFDQLEDEPLDLLDRQKTRSALRSSEHLKQKTESDDE
PEIDSEGRLIIHEGRKPKKVKPSNPDLDGRSEAGSMMSRPSSRKTQKRRKTSESGWAYTG
SEYASKKASGDVKRKGKLEPYAYWPMDRKLMSRRPEHRAAARKGMASVVKLTKKLEGKSA
SSALSMKFTKSKKGRR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039448
(1276 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1006230010 - symbol:AT2G34357 species:3702 "Ar... 3163 0. 2
TAIR|locus:2117914 - symbol:AT4G23540 species:3702 "Arabi... 914 4.9e-100 3
UNIPROTKB|Q5ZKD5 - symbol:RRP12 "RRP12-like protein" spec... 435 3.8e-79 4
UNIPROTKB|Q5JTH9 - symbol:RRP12 "RRP12-like protein" spec... 407 9.3e-75 4
ZFIN|ZDB-GENE-050706-182 - symbol:rrp12 "ribosomal RNA pr... 459 3.3e-74 3
MGI|MGI:2147437 - symbol:Rrp12 "ribosomal RNA processing ... 405 5.1e-74 4
DICTYBASE|DDB_G0280797 - symbol:DDB_G0280797 "putative ri... 516 2.8e-63 6
CGD|CAL0001929 - symbol:orf19.7011 species:5476 "Candida ... 642 2.7e-59 3
UNIPROTKB|Q5AFQ7 - symbol:CaO19.7011 "Putative uncharacte... 642 2.7e-59 3
SGD|S000005933 - symbol:RRP12 "Protein required for expor... 596 9.0e-54 3
ASPGD|ASPL0000000189 - symbol:AN6200 species:162425 "Emer... 570 2.5e-52 4
POMBASE|SPAPB8E5.07c - symbol:rrp12 "rRNA processing prot... 318 1.1e-48 4
FB|FBgn0030504 - symbol:CG2691 species:7227 "Drosophila m... 234 3.0e-23 2
WB|WBGene00021595 - symbol:Y46E12BL.2 species:6239 "Caeno... 164 7.3e-13 3
POMBASE|SPBC1105.01 - symbol:SPBC1105.01 "rRNA processing... 167 7.4e-08 2
>TAIR|locus:1006230010 [details] [associations]
symbol:AT2G34357 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0006406 "mRNA export from
nucleus" evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR016024 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 KO:K14794 InterPro:IPR012978
Pfam:PF08161 OMA:HAAMTMK IPI:IPI00521077 RefSeq:NP_973597.1
UniGene:At.43025 ProteinModelPortal:F4IHU8 SMR:F4IHU8 PRIDE:F4IHU8
EnsemblPlants:AT2G34357.1 GeneID:2745580 KEGG:ath:AT2G34357
Uniprot:F4IHU8
Length = 1280
Score = 3163 (1118.5 bits), Expect = 0., Sum P(2) = 0.
Identities = 648/1123 (57%), Positives = 812/1123 (72%)
Query: 153 SQLYGVVLAFMTDSRLKVRRQSHLCVREILLSLQGTLVLAPASEAITNMFEKFLLLAGGS 212
S Y ++L F+T S KVR+ + C+R++L GT S AIT MF+ +L LA S
Sbjct: 158 SDSYNILLNFVTHSDGKVRKLASSCLRDVLQKSHGTKAWQSVSGAITEMFQNYLDLAHKS 217
Query: 213 NTSADEKPKGAQEVLYVLDALKECLPLMSTKYTAVILKYFKTLLELRQPLVTRRVTDALN 272
+ E +GA++VLY+L LKECL LMS K+ A +++ FK L+ LR P +TR V D+LN
Sbjct: 218 EVGSTEGARGAKQVLYILSTLKECLALMSKKHIATLIEGFKVLMILRDPYITRPVIDSLN 277
Query: 273 VICLHPTLEVXXXXXXXXXXXXXXXVSTNETSADAMTFTARLLNVGMIKIYSINREICST 332
+CL+PT EV S +ETSADAMTFTARLL VGM + +++NR++C
Sbjct: 278 AVCLNPTSEVPVEALLEVLSLAAGLFSGHETSADAMTFTARLLKVGMTRSFTLNRDLCVV 337
Query: 333 KLPIVFNALKDILASEHEEAIFAATEALKNLINACIDESLIKQGVDQITNVNSDARKSGP 392
KLP VFN L DI+ASEHEEAIFAAT+ALK+LI +CIDESLI++GV++I N N + RK P
Sbjct: 338 KLPSVFNGLNDIIASEHEEAIFAATDALKSLIFSCIDESLIREGVNEIRNSNLNVRKPSP 397
Query: 393 TVIEKICATVESLLDYHYSAVWDMAFQIVSTMFDKLGTYSSYFMRGALKNLADMQNLPDE 452
TVIEK+CATVESLLDY Y AVWDMAFQ+VS MFDKLG +S+YFMR L+ L+DMQ+LPDE
Sbjct: 398 TVIEKLCATVESLLDYKYHAVWDMAFQVVSAMFDKLGEHSAYFMRNTLQGLSDMQDLPDE 457
Query: 453 DFPYRKQLHECVGSAVGSMGPETFLCLLPLKLEASDLSEVNVWLFPILKQYIIGARLNFF 512
FPYRKQLHECVGSA+G+MGPETFL ++ L LEA+DLSEV VWLFPILKQY +G RL+FF
Sbjct: 458 GFPYRKQLHECVGSALGAMGPETFLSIVRLNLEANDLSEVKVWLFPILKQYTVGGRLSFF 517
Query: 513 MEKLLGMAKLIGQKSQKFELEGRVFSSRSADALVYSLWSLLPSFCNYPVDTAESFMDLAG 572
E + M + + K+QK +L+G +SRS D+LVYSLW+LLPSFCNYPVDT ESF DL
Sbjct: 518 TEAIFSMVETMSHKAQKLKLQGLPVASRSVDSLVYSLWALLPSFCNYPVDTVESFADLGR 577
Query: 573 VLCSALHEENDIRGIICSSLQNLIQQNKKTLEGKNDLSNVVISTASQRAMAHYTTKVATD 632
+LC L + + GIIC+SL LIQQNK+ +EGK +N S A QRA A Y ++ A
Sbjct: 578 ILCGVLQTQAETHGIICASLNILIQQNKEVVEGKEVPTNDA-SPAMQRATARYDSQHAAA 636
Query: 633 NLNVLKSSARELLSILSRIFLESAKDEGGCLQSTIGDFASIADKEIVTRLFKRTMHRLLE 692
NL VL+ A +LL +LSRIF E +KD+GG LQS IG+ ASIA+K+ V++L +T+ LLE
Sbjct: 637 NLKVLRLCAPKLLDVLSRIFHECSKDDGGSLQSAIGNLASIAEKKTVSKLLFKTLQELLE 696
Query: 693 ATQEAGKTKSTRKSNSMQIDDSSNESSPDFMRARLFDLALSLLPGLNAKEIDVLFVAIKP 752
AT+ A + S M +D++++++S +RARLFDL +SLLPGL+ +E+D +F ++KP
Sbjct: 697 ATKTAIAQDESPVSG-MDVDNTADKNSSSNLRARLFDLLVSLLPGLDGQEVDTIFSSLKP 755
Query: 753 ALQDDEGLIQKKAYKVLSTILRKCDGFLSSRLEELLGLMIEVLPSCHFSAKRHRLDCLYF 812
A+QD +GLIQKKAYKVLS IL+ DGF+S LEELL LM + CH SAKRH+LDCLYF
Sbjct: 756 AMQDSKGLIQKKAYKVLSVILKSSDGFVSKNLEELLVLMHNI---CHVSAKRHKLDCLYF 812
Query: 813 IIAHVSKDDSEQRRSYILSSFLTEIILALKEANKRTRNRAYDVLVQIGRAFGDEENGGGK 872
++AH S+ D + R I+SSFL E+ILALKE NK+TRNRAYDVLVQIG A+ DEENGG
Sbjct: 813 LLAHASRTDDLKERKDIVSSFLPEVILALKEVNKKTRNRAYDVLVQIGHAYADEENGGDN 872
Query: 873 ENLYQFFNMVAGGLAGESPHMISAAVKGLARLAYEFSDLVSNVYKLLPSTFLLLQRKNRE 932
E L+ +F+MV G LAGE P MISAAVKG+ARL YEFSDL+S+ Y LLPSTFLLLQRKN+E
Sbjct: 873 EKLHGYFDMVVGCLAGEKPQMISAAVKGVARLTYEFSDLISSAYNLLPSTFLLLQRKNKE 932
Query: 933 IIKANLGLLKVLVAKSHAEGLQIHLASMVEGLLKWQDDTKNQFKSKIKLLLEMLVKKCGL 992
I KANLGLLKVLVAKS EGL +L SMVEGLLKW + TKN FK+K++LLLEML+KKCG
Sbjct: 933 ITKANLGLLKVLVAKSPVEGLHANLKSMVEGLLKWPEGTKNLFKAKVRLLLEMLIKKCGT 992
Query: 993 DAVKAVMPEEHMXXXXXXXXXXXXXXXXXATKTEDTKSHFSKTTTSRLSRWNHTKIFSD- 1051
+AVK+VMPEEHM A ++ +KS SK T+S++SRWN TKIFSD
Sbjct: 993 EAVKSVMPEEHMKLLTNIRKIKERKEKKYAAGSDISKSQHSKDTSSKVSRWNDTKIFSDV 1052
Query: 1052 FGDEGSEGSDAEYMDVGTVSGQGSKASPQLKSKVSTLRLKKKRKADKIXXXXXXXXXXXX 1111
+ D SE SD + MD + G+ SKAS LKSK S LR KK R +
Sbjct: 1053 YAD--SEDSDGDDMDAES-HGR-SKASSLLKSKASALRSKKSRNQSHLEVDESDDEPLDL 1108
Query: 1112 XXXXXXRQKTRSALRSSEHLKQKTESDDEPEIDSEGRLIIHEGRKPKKVKPSNPDLDGRS 1171
+ KTR ALRSSE K+K +SD+E E D EGRL+I EG + K+ + S+ D D +S
Sbjct: 1109 MD----QHKTRLALRSSELRKRKADSDEEAEFDVEGRLVIREGERSKRKELSDADSDAKS 1164
Query: 1172 EAGSMMSRPSSRKTQKRRKTSESGWAYTGSEYASKKASGDVKRKGKLEPYAYWPMDRKLM 1231
GS S SS+K QKR KTSESG+AYTG EYASKKASGD+K+K KLEPYAYWP+DRK+M
Sbjct: 1165 SKGSRFSGNSSKKNQKRMKTSESGYAYTGKEYASKKASGDLKKKDKLEPYAYWPLDRKMM 1224
Query: 1232 SRRPEHRAAARKGMASVVKLTKKLEGKSASSALSM-KFTKSKK 1273
SRRPE RA A +GM+SVVK+ KK+EGKSA+ AL+ KF K K+
Sbjct: 1225 SRRPEQRAVAVRGMSSVVKMAKKMEGKSAAEALATTKFKKFKR 1267
Score = 91 (37.1 bits), Expect = 0., Sum P(2) = 0.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 35 EHQHLCAAIGAMSQELKDQNLPLTPISYFGATC 67
+H+HLCA I +S+ L + N TP++YF TC
Sbjct: 42 DHEHLCAVIEELSKTLAEDNHRRTPVAYFACTC 74
>TAIR|locus:2117914 [details] [associations]
symbol:AT4G23540 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002687
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 KO:K14794
InterPro:IPR012978 Pfam:PF08161 IPI:IPI00540896 RefSeq:NP_194085.4
UniGene:At.47961 UniGene:At.48897 ProteinModelPortal:F4JNL5
SMR:F4JNL5 PRIDE:F4JNL5 EnsemblPlants:AT4G23540.1 GeneID:828454
KEGG:ath:AT4G23540 OMA:APQHRHL Uniprot:F4JNL5
Length = 1131
Score = 914 (326.8 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 252/884 (28%), Positives = 446/884 (50%)
Query: 148 NWSDVSQLYGVVLAFMTDSRLKVRRQSHLCVREILLSLQGTLVLAPASEAITNMFEKFL- 206
+W + + ++L F D R KVRR + C+ ++ SL+ + V+ AS + + +++
Sbjct: 149 DWESLQIGFALLLKFAIDKRPKVRRCAQECLEKLFGSLRSSTVIKEASNTVYALLKEYKP 208
Query: 207 LLAGGSNTSADE--------KPKGAQEVLYVLDALKECLPLMSTKYTAVILKYFKTLLEL 258
+L+ S+T +E K + A E +VL+ L +P +S K ++ + L+
Sbjct: 209 VLSDLSSTKIEEGSKVDSTLKSENA-EAAHVLNVLSATIPFLSAKVSSRVFSELCGLMAS 267
Query: 259 RQPLVTRRVTDALNVICLHPTLEVXXXXXXXXXXXXXXXVSTNETS-ADAMTFTARLLNV 317
+ +TR++ ++ I + ++ +S ++ + AD + LL
Sbjct: 268 QFSPLTRQILKGIDTIFKNSEDKIVVPEIEGLVTTLTSYLSLHDKNPADTIVHVTTLLKD 327
Query: 318 GMIKIYSINREICSTKLPIVFNALKDILASEHEEAIFAATEALKNLINACIDES-LIKQG 376
+ K YS+ +C +KLP+V ++L +L S + A A+T LK+LI++ ID+ L+ +G
Sbjct: 328 ALEKAYSVEPTLCLSKLPLVCSSLAGLLTSTDDIASKAST-ILKDLISSHIDKKKLLTEG 386
Query: 377 VDQITNVNSDARKSGPTV--IEKICATVESLLDYHYSAVWDMAFQIVSTMFDKLGTYSSY 434
++N + D SG + +C+ ES+L+ + +++ + +KLG S
Sbjct: 387 --SLSNQDEDNVTSGDNINAARCVCSVFESVLNSCDGIPNEHILTVINLLIEKLGELSYI 444
Query: 435 FMRGALKNLADMQNLPDEDFPYRKQLHECVGSAVGSMGPETFLCLLPLKLEASDLSEVNV 494
+ + LAD+ D + L +C+GSAV +MGP L LLP+ L A S N
Sbjct: 445 LAKNIILKLADLMKNAIGDTSSSQDLQQCIGSAVVAMGPVRLLTLLPITLHAESHSCTNA 504
Query: 495 WLFPILKQYIIGARLNFFMEKLLGMAK--LIGQKSQKFELEGRVFSSRSADALVYSLWSL 552
WL PIL++YIIGA L ++++ ++ +AK ++ K K G+ A + L L
Sbjct: 505 WLIPILRKYIIGASLAYYVDNIVPLAKSLMLASKGAKKSTHGKELR-----ACGHELLRL 559
Query: 553 LPSFCNYPVDTAESFMDLAGVLCSALHEENDIRGIICSSLQNLIQQNKKTLEGKNDLSNV 612
LP+FCNYPVD A F LA ++ + +++ + + SLQ L+ QNK + D+
Sbjct: 560 LPAFCNYPVDVANKFGSLAKLMVKFIKKKSFMHEAVALSLQMLVNQNKGMPKPSTDMGEA 619
Query: 613 -VIS-----TASQRAMAHYTTKVATDNLNVLKSSARELLSILSRIFLESAKDEGGCLQST 666
IS T +R HY+ K +T N+ L SS+ ELL L +F S + ++
Sbjct: 620 KAISEEDATTELERGF-HYSKKASTKNMKALASSSTELLQTLVDVFTVSGTEISADFKAA 678
Query: 667 IGDFASIADKEIVTRLFKRTMHRLLEATQEAGKTKS---TRKSNSMQIDDSSNESSP--D 721
IG AS D + R K+ + LL AG++++ +SN ++ N SS
Sbjct: 679 IGCLASTLDSSV--R--KKILISLLNKFDPAGESETEGQVNQSNDSVDEEKENCSSTKTQ 734
Query: 722 FMRARLFDLALSLLPGLNAKEIDVLFVAIKPALQDDEGLIQKKAYKVLSTILRKCDGFLS 781
R+ + DLA S + G I++++ ++ + Q + AY LS +L++ F +
Sbjct: 735 LKRSAVLDLASSFVEGAKEDLIELIYNLVRQSFQATDEADLYGAYDTLSRVLQEHGWFCA 794
Query: 782 SRLEELLGLMIEVLPSCHFSAKRHRLDCLYFIIAH--VSKDDSEQRRSYILSSFLTEIIL 839
S E++ +++ ++ R R CL+ ++AH S + E +++++ L E+IL
Sbjct: 795 SHFAEVIEMLLSHKTPEDAASSRSRFACLHVLMAHGIQSSTEEENEKAFLI---LNEMIL 851
Query: 840 ALKEANKRTRNRAYDVLVQIGRAFGDEENGGGKENLYQFFNMVAGGLAGESPHMISAAVK 899
LKE + R A D LV + + + E + NM+ G ++G SPH+ S AV
Sbjct: 852 TLKEGKEEHRKAACDTLVMVYTTLKNSSSITSDELCPKLINMITGYISGTSPHIRSGAVS 911
Query: 900 GLARLAYEFSDLVSNVYKLLPSTFLLLQRKNREIIKANLGLLKVLVAKSHAEGLQIHLAS 959
L+ L Y+ ++ + +LL S LL K+ EIIKA LG +KVLV+ S A+ L L +
Sbjct: 912 ALSALVYKDPEICLSSPELLSSVLSLLHTKSIEIIKAVLGFVKVLVSTSQAQDLHSLLQN 971
Query: 960 MVEGLLKWQDDTKNQFKSKIKLLLEMLVKKCGLDAVKAVMPEEH 1003
++ +L W +++ FKSK+ +++E++V+KCG AV+ P++H
Sbjct: 972 LLYEILPWSSVSRHYFKSKVTIIVEIMVRKCGTRAVQLATPDKH 1015
Score = 74 (31.1 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 2 DAFEMEDGTAFSIGNDVDLCXXXXXXXXXXAQEEHQHLCAAIGAMSQELKDQNLPLTPIS 61
D + D AF GN D+ + +H+HL A AM L ++LP +P +
Sbjct: 6 DRADENDEIAFKDGN-TDISQQLMDRYGKSSAAQHRHLVATAVAMRSILTSESLPPSPSA 64
Query: 62 YFGA 65
+F A
Sbjct: 65 FFAA 68
Score = 38 (18.4 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 15/77 (19%), Positives = 32/77 (41%)
Query: 1136 ESDDEPEIDSEGRLIIHEGRKPKK--VKPSNPDLDGRSEAGSMMSRPSSRKTQKRRKTSE 1193
+S D+ E + I R P+K + ++ + + + G+ R R Q+ S+
Sbjct: 1029 KSKDKEETNESQTTSIDPSRGPRKRNYREASSETTAKQD-GNKFKR-QKRTYQQHTPASD 1086
Query: 1194 SGWAYTGSEYASKKASG 1210
+ TG + ++ G
Sbjct: 1087 INQSRTGPQRPGNRSFG 1103
>UNIPROTKB|Q5ZKD5 [details] [associations]
symbol:RRP12 "RRP12-like protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR016024 GO:GO:0016021
SUPFAM:SSF48371 GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0031965 EMBL:AJ720149 IPI:IPI00587165 RefSeq:NP_001012926.1
UniGene:Gga.13916 ProteinModelPortal:Q5ZKD5 STRING:Q5ZKD5
GeneID:423845 KEGG:gga:423845 CTD:23223 eggNOG:NOG149372
HOGENOM:HOG000006643 HOVERGEN:HBG080767 InParanoid:Q5ZKD5 KO:K14794
OrthoDB:EOG4VMFDK NextBio:20826252 InterPro:IPR012978 Pfam:PF08161
Uniprot:Q5ZKD5
Length = 1294
Score = 435 (158.2 bits), Expect = 3.8e-79, Sum P(4) = 3.8e-79
Identities = 123/458 (26%), Positives = 206/458 (44%)
Query: 149 WS-DVS-QLYGVVLAFMTDSRLKVRRQSHLCVREILLSLQGTLV-LAPASEAITNMFEKF 205
WS V+ Q+Y +L+F ++ KVR+ + V +L + AP KF
Sbjct: 231 WSYPVTLQVYHGLLSFCVHTKPKVRKAAQHGVCSVLRGSEFMFGDEAPEHHPAAPSSAKF 290
Query: 206 LLL----AGGSNTSADEKPKGAQEVLYVLDALKECLPLMSTKYTAVILKYFKTLLELRQP 261
+ AGG+ K A L+VL L++ LP + ++ L
Sbjct: 291 CVQEIEKAGGT--------KEATTTLHVLALLRDLLPCFPAAVLKTCCETLLRVMTLSHV 342
Query: 262 LVTRRVTDALN-VICLHPTLEVXXXXXXXXXXXXXXXVSTNETSADAMTFTARLLNVGMI 320
LVT A + + P + + + +
Sbjct: 343 LVTACAMQAFHSLFSAQPRTSCLPAELNAQIITALYDYVPSANDLQPLLTWLTTMERAHV 402
Query: 321 KIYSINREICSTKLPIVFNALKDILASEHEEAIFAATEALKNLINACIDESLIKQGVDQI 380
+ + +++C LP +F+A + S H + + AA + L+ L+N CI + D++
Sbjct: 403 NLGRLQKDLCWAHLPRLFSATMNCFLSPHLQVVAAAAQTLETLLNECIAPHM-----DEL 457
Query: 381 TNVNSDARKSGPTVIEKICATVESLLDYHYSAVWDMAFQIVSTMFDKLGTYSSYFMRGAL 440
NV++ G + + K+ +VE L Y + A WD Q++ F+ G MR L
Sbjct: 458 GNVSASTPAPG-SYLCKMFRSVEEGLTYRFHAAWDGVLQVLEVFFEVCGKQCHPIMRKCL 516
Query: 441 KNLADMQNLPDEDFPYRKQLHECVGSAVGSMGPETFLCLLPLKLEASD--LSEVNVWLFP 498
++L D++ P FPY ++ + VG+AVG+MGPE L +PL+++ + L WL P
Sbjct: 517 QSLCDLRLSPH--FPYTTEVDQAVGAAVGAMGPEVLLEAVPLQIDGKEETLDFPRSWLLP 574
Query: 499 ILKQYIIGARLNFFMEKLLGMAKLIGQKSQKFELEGRVFSSRSADALVYSLWSLLPSFCN 558
+L+ Y+ GARL FF L +A + ++ +F G+ S+ D L + +W+LLP FC
Sbjct: 575 VLRDYVQGARLGFFTSYFLPLAATLKSRALEFAQAGKSLESKIYDTLQWQVWTLLPGFCT 634
Query: 559 YPVDTAESFMDLAGVLCSALHEENDIRGIICSSLQNLI 596
P D E+F LA L A+ E D+R +C +L+ LI
Sbjct: 635 RPTDVVEAFKGLARTLGMAISERPDLRPTVCQALRTLI 672
Score = 376 (137.4 bits), Expect = 3.8e-79, Sum P(4) = 3.8e-79
Identities = 98/295 (33%), Positives = 161/295 (54%)
Query: 714 SSNESSPDFMRARLFDLALSLLPGLNAKEIDVLFVAIKPALQDDEGLIQKKAYKVLSTIL 773
+S ESS +F R + DL +++ P N + + L+ I+P+LQ + +QKKAY+VL +
Sbjct: 744 TSPESS-EFARLSILDLVVAMSPYANEQALGSLYRTIQPSLQSKDHSMQKKAYRVLEEVC 802
Query: 774 RK----CDGFLSSRLEELLGLMIEVLPSCHFSAKRHRLDCLYFIIAHVSKDDSEQRRSYI 829
C F+ S LEEL ++++ L S AKR RL CL+ H+ K S + ++
Sbjct: 803 AAPHAPCQAFVHSHLEELQAVLLDSLKSAASPAKRPRLKCLF----HIMKQLSAEHEPFV 858
Query: 830 LSSFLTEIILALKEANKRTRNRAYDVLVQIGRAFGDEENGGGKENLYQFFNMVAGGLAGE 889
++ + E+IL KE + R A+ +LV++G AF +E + +F +V GL G
Sbjct: 859 -TALVPEVILCTKEVSVGARKNAFMLLVEMGHAF-IRFGPTPQEAMERFLLLVYAGLTG- 915
Query: 890 SPHMISAAVKGLARLAYEFSDLVS-NVYK-LLPSTFLLLQRKNREIIKANLGLLKVLVAK 947
S MIS V L RL +EF D + NV + LL + LLL + R+++KA LG +KV++
Sbjct: 916 SVTMISCTVLALTRLFFEFRDHMELNVVEQLLQNICLLLGSRTRDVVKAALGFIKVVLLL 975
Query: 948 SHAEGLQIHLASMVEGLLKWQDDTKNQFKSKIKLLLEMLVKKCGLDAVKAVMPEE 1002
L H+ +M+E + DD + F+ K++ L ++K G + V+ ++P E
Sbjct: 976 VDTTLLAKHVQTMLEAVGSLSDDMRRHFRMKLRNLFTKFIRKFGFELVQGLLPAE 1030
Score = 128 (50.1 bits), Expect = 3.8e-79, Sum P(4) = 3.8e-79
Identities = 34/120 (28%), Positives = 63/120 (52%)
Query: 1132 KQKTESDDEPEIDSEGRLIIHE-GRKPKKVKP----SNPDLDGRSEAGSMMSRPSSRKTQ 1186
+++ ++D+ ++ E ++ E G + KK + PD D E G+ +
Sbjct: 1158 EEEVDNDEAKGVEEEVADVLQEVGLRSKKSQKRRFREEPD-DDEPETGTYSQYRAGGSGI 1216
Query: 1187 KRRKTSESGWAYTGSEYASKKASGDVKRKGKLEPYAYWPMDRKLMSRRPEHRAAAR-KGM 1245
R + + G+EY SKK GDVK+KG+L+PYAY P++R +++R + + + KG+
Sbjct: 1217 HRPLDKKPAF---GAEYRSKKGKGDVKKKGQLDPYAYIPLNRAKLNKRKQAKMQGQFKGL 1273
Score = 61 (26.5 bits), Expect = 3.8e-72, Sum P(4) = 3.8e-72
Identities = 25/95 (26%), Positives = 45/95 (47%)
Query: 1121 TRSALRSSEHLKQKTESDDEPEIDSEGRLIIHEGRKPKKVKPSNPDLDG-RSEAGSMMSR 1179
++ L + LK+ + ++ +GRLIIH+ + ++V N + G E ++
Sbjct: 1124 SQRVLATEPSLKKSRGVKHDFQVSEDGRLIIHD--EEEEV--DNDEAKGVEEEVADVLQE 1179
Query: 1180 PS--SRKTQKRRKTSE--SGWAYTGSEYASKKASG 1210
S+K+QKRR E TG+ Y+ +A G
Sbjct: 1180 VGLRSKKSQKRRFREEPDDDEPETGT-YSQYRAGG 1213
Score = 51 (23.0 bits), Expect = 3.8e-79, Sum P(4) = 3.8e-79
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 36 HQHLCAAIGAMSQELKDQNLPLTPISYFGA 65
H+ +CA + A++ ++ Q T YF A
Sbjct: 123 HKEICAVLAAVTDVIRSQGGKETETEYFAA 152
Score = 41 (19.5 bits), Expect = 2.8e-37, Sum P(3) = 2.8e-37
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 20 LCXXXXXXXXXXAQEEHQHLCAAIGAMSQELKDQNLPL 57
LC E Q + AA+GAM E+ + +PL
Sbjct: 519 LCDLRLSPHFPYTTEVDQAVGAAVGAMGPEVLLEAVPL 556
>UNIPROTKB|Q5JTH9 [details] [associations]
symbol:RRP12 "RRP12-like protein" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR016024 GO:GO:0016021
SUPFAM:SSF48371 GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0031965 EMBL:AL355490 CTD:23223 eggNOG:NOG149372
HOGENOM:HOG000006643 HOVERGEN:HBG080767 KO:K14794 OrthoDB:EOG4VMFDK
InterPro:IPR012978 Pfam:PF08161 OMA:LLCVFFE EMBL:AB014590
EMBL:AK296315 EMBL:BC002621 EMBL:BC012745 EMBL:AL832924
IPI:IPI00101186 IPI:IPI00294794 IPI:IPI00940901 PIR:T00356
RefSeq:NP_001138586.1 RefSeq:NP_055994.2 UniGene:Hs.434251
ProteinModelPortal:Q5JTH9 SMR:Q5JTH9 IntAct:Q5JTH9
MINT:MINT-1160282 STRING:Q5JTH9 PhosphoSite:Q5JTH9 DMDM:71153787
SWISS-2DPAGE:Q5JTH9 PaxDb:Q5JTH9 PRIDE:Q5JTH9
Ensembl:ENST00000315563 Ensembl:ENST00000370992
Ensembl:ENST00000414986 GeneID:23223 KEGG:hsa:23223 UCSC:uc001knf.3
UCSC:uc009xvn.3 GeneCards:GC10M099107 H-InvDB:HIX0009088
HGNC:HGNC:29100 neXtProt:NX_Q5JTH9 PharmGKB:PA162402122
InParanoid:Q5JTH9 PhylomeDB:Q5JTH9 ChiTaRS:RRP12 GenomeRNAi:23223
NextBio:44819 ArrayExpress:Q5JTH9 Bgee:Q5JTH9 CleanEx:HS_RRP12
Genevestigator:Q5JTH9 GermOnline:ENSG00000052749 Uniprot:Q5JTH9
Length = 1297
Score = 407 (148.3 bits), Expect = 9.3e-75, Sum P(4) = 9.3e-75
Identities = 118/447 (26%), Positives = 190/447 (42%)
Query: 154 QLYGVVLAFMTDSRLKVRRQSHLCVREILLSLQGTLVLAPASEAITNMFEKFLLLAGGSN 213
Q+Y +L+F + K+R+ + V +L + APA KF +
Sbjct: 236 QVYHGLLSFTVHPKPKIRKAAQHGVCSVLKGSEFMFEKAPAHHPAAISTAKFCI----QE 291
Query: 214 TSADEKPKGAQEVLYVLDALKECLPLMSTKYTAVILKYFKTLLELRQPLVTRRVTDALNV 273
K A L++L LK+ LP + ++ L LVT A +
Sbjct: 292 IEKSGGSKEATTTLHMLTLLKDLLPCFPEGLVKSCSETLLRVMTLSHVLVTACAMQAFHS 351
Query: 274 IC-LHPTLEVXXXXXXXXXXXXXXXVSTNETSADAMTFTARLLNVGMIKIYSINREICST 332
+ P L +E + +++ I + + ++
Sbjct: 352 LFHARPGLSTLSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHINLVRLQWDLGLG 411
Query: 333 KLPIVFNALKDILASEHEEAIFAATEALKNLINACIDESLIKQGVDQITNVNSDARKSGP 392
LP F L S H + + AAT++LK ++ C+ + G +V S A SGP
Sbjct: 412 HLPRFFGTAVTCLLSPHSQVLTAATQSLKEILKECVAPHMADIG-----SVTSSA--SGP 464
Query: 393 TV-IEKICATVESLLDYHYSAVWDMAFQIVSTMFDKLGTYSSYFMRGALKNLADMQNLPD 451
+ K+ VE L Y + A W Q++ F+ G + MR L++L D++ P
Sbjct: 465 AQSVAKMFRAVEEGLTYKFHAAWSSVLQLLCVFFEACGRQAHPVMRKCLQSLCDLRLSPH 524
Query: 452 EDFPYRKQLHECVGSAVGSMGPETFLCLLPLKLEASD--LSEVNVWLFPILKQYIIGARL 509
FP+ L + VG+AV SMGPE L +PL+++ S+ L WL P+++ ++ RL
Sbjct: 525 --FPHTAALDQAVGAAVTSMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVQETRL 582
Query: 510 NFFMEKLLGMAKLIGQKSQKFELEGRVFSSRSADALVYSLWSLLPSFCNYPVDTAESFMD 569
FF L +A + K+ G S+ D L + +W+LLP FC P D A SF
Sbjct: 583 GFFTTYFLPLANTLKSKAMDLAQAGSTVESKIYDTLQWQMWTLLPGFCTRPTDVAISFKG 642
Query: 570 LAGVLCSALHEENDIRGIICSSLQNLI 596
LA L A+ E D+R +C +L+ LI
Sbjct: 643 LARTLGMAISERPDLRVTVCQALRTLI 669
Score = 367 (134.2 bits), Expect = 9.3e-75, Sum P(4) = 9.3e-75
Identities = 101/343 (29%), Positives = 168/343 (48%)
Query: 668 GDFASIADKEIVTRLFKRTMHRLLEATQEAGKTKSTRKSNSMQIDDSSNESSPDFMRARL 727
G + D R T+ L T K++ +D +S+ DF R +
Sbjct: 698 GQPVAAGDTPAPRRAVLETIRTYLTITDTQLVNSLLEKASEKVLDPASS----DFTRLSV 753
Query: 728 FDLALSLLPGLNAKEIDVLFVAIKPALQDDEGLIQKKAYKVLSTILRKCDG----FLSSR 783
DL ++L P + I L+ I+P L+ +QKKAY+VL + G F+ S
Sbjct: 754 LDLVVALAPCADEAAISKLYSTIRPYLESKAHGVQKKAYRVLEEVCASPQGPGALFVQSH 813
Query: 784 LEELLGLMIEVLPSCHFSAKRHRLDCLYFIIAHVSKDDSEQRRSYILSSFLTEIILALKE 843
LE+L +++ L S AKR RL CL I+ +S + E +++ + E+IL KE
Sbjct: 814 LEDLKKTLLDSLRSTSSPAKRPRLKCLLHIVRKLSAEHKE-----FITALIPEVILCTKE 868
Query: 844 ANKRTRNRAYDVLVQIGRAFGDEENGGGKENLYQ-FFNMVAGGLAGESPHMISAAVKGLA 902
+ R A+ +LV++G AF G +E Q + ++ GL G + M+S ++ L
Sbjct: 869 VSVGARKNAFALLVEMGHAF--LRFGSNQEEALQCYLVLIYPGLVG-AVTMVSCSILALT 925
Query: 903 RLAYEFSDLV--SNVYKLLPSTFLLLQRKNREIIKANLGLLKVLVAKSHAEGLQIHLASM 960
L +EF L+ S V +LL + LLL + R+++K+ LG +KV V L H+ +
Sbjct: 926 HLLFEFKGLMGTSTVEQLLENVCLLLASRTRDVVKSALGFIKVAVTVMDVAHLAKHVQLV 985
Query: 961 VEGLLKWQDDTKNQFKSKIKLLLEMLVKKCGLDAVKAVMPEEH 1003
+E + K DD + F+ K++ L ++K G + VK ++PEE+
Sbjct: 986 MEAIGKLSDDMRRHFRMKLRNLFTKFIRKFGFELVKRLLPEEY 1028
Score = 123 (48.4 bits), Expect = 9.3e-75, Sum P(4) = 9.3e-75
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 1197 AYTGSEYASKKASGDVKRKGKLEPYAYWPMDRKLMSRRPEHRAAAR-KGMASVVK 1250
A G+EY +KKA GDVK+KG+ +PYAY P++R ++RR + + + KG+ +
Sbjct: 1227 AMPGAEYKAKKAKGDVKKKGRPDPYAYIPLNRSKLNRRKKMKLQGQFKGLVKAAR 1281
Score = 53 (23.7 bits), Expect = 9.3e-75, Sum P(4) = 9.3e-75
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 36 HQHLCAAIGAMSQELKDQNLPLTPISYFGA 65
H+ +CA + A+++ ++ Q T YF A
Sbjct: 121 HKEICAVLAAVTEVIRSQGGKETETEYFAA 150
Score = 44 (20.5 bits), Expect = 3.4e-41, Sum P(4) = 3.4e-41
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 677 EIVTRLFKRTMHRLLEATQEA-GKTKSTRKSNSMQIDDSSNESSPD 721
E+V RL HR+L ++A + K R + +++ E +
Sbjct: 1018 ELVKRLLPEEYHRVLVNIRKAEARAKRHRALSQAAVEEEEEEEEEE 1063
Score = 39 (18.8 bits), Expect = 5.3e-66, Sum P(4) = 5.3e-66
Identities = 26/111 (23%), Positives = 42/111 (37%)
Query: 1125 LRSSEHLK---QKTESDDEPEIDSE---GRLIIHEGRKPK-------KVKPSNPDLDGRS 1171
+R+ +H K QK ++E EI + G IH K K K + D+ +
Sbjct: 1187 IRNKKHQKLKHQKEAEEEELEIPPQYQAGGSGIHRPVAKKAMPGAEYKAKKAKGDVKKKG 1246
Query: 1172 EAGSMMSRPSSRKTQKRRKTSESGWAYTGSEYASKKAS--GDVKRKGKLEP 1220
P +R RRK + + G A+++ S G R+ P
Sbjct: 1247 RPDPYAYIPLNRSKLNRRKKMKLQGQFKGLVKAARRGSQVGHKNRRKDRRP 1297
Score = 38 (18.4 bits), Expect = 3.4e-36, Sum P(4) = 3.4e-36
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 562 DTAESFMDLAGVLCSALHEENDIRGIICSSLQNLIQQNKKTLE 604
DT+++FMD+ S+ + +R ++ S L L++ K+ LE
Sbjct: 189 DTSKAFMDIMSAQASS-GSTSVLRWVL-SCLATLLR--KQDLE 227
Score = 37 (18.1 bits), Expect = 8.6e-66, Sum P(4) = 8.6e-66
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 1237 HRAAARKGMASVVKLTKKLEG 1257
HR A+K M KK +G
Sbjct: 1220 HRPVAKKAMPGAEYKAKKAKG 1240
>ZFIN|ZDB-GENE-050706-182 [details] [associations]
symbol:rrp12 "ribosomal RNA processing 12 homolog
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024
ZFIN:ZDB-GENE-050706-182 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 CTD:23223 HOVERGEN:HBG080767 KO:K14794
InterPro:IPR012978 Pfam:PF08161 EMBL:BC098593 IPI:IPI00502767
RefSeq:NP_001025447.1 UniGene:Dr.83713 STRING:Q4KMF4 GeneID:563195
KEGG:dre:563195 InParanoid:Q4KMF4 NextBio:20884776 Uniprot:Q4KMF4
Length = 1283
Score = 459 (166.6 bits), Expect = 3.3e-74, Sum P(3) = 3.3e-74
Identities = 154/551 (27%), Positives = 250/551 (45%)
Query: 716 NESSPDFMRARLFDLALSLLPGLNAKEIDVLFVAIKPALQDDEGLIQKKAYKVLSTIL-- 773
N + +F R + DL +++ P ++ + + IKP ++ + IQKKAY+VL I
Sbjct: 739 NADNTEFTRLAVIDLVVAMAPFVDEASMSQILEFIKPFVESKDTGIQKKAYRVLEEICGG 798
Query: 774 --RKCDGFLSSRLEELLGLMIEVLPSCHFSAKRHRLDCLYFIIAHVSKDDSEQRRSYILS 831
C F+ + LE+L +++E L + AKR RL CL H+ K +E+ R +I +
Sbjct: 799 ERASCKAFVLANLEQLKKMLMESLKTAASPAKRPRLKCLI----HIVKQLNEEHRDFI-T 853
Query: 832 SFLTEIILALKEANKRTRNRAYDVLVQIGRAFGDEENGGGKENLYQFFNMVAGGLAGESP 891
+ L E+IL KE + R AY +LV+IG AF + G K+ + ++ V GL G S
Sbjct: 854 ALLPEVILCTKEMSIGARKNAYTLLVEIGNAF-ERFCGNTKDAINEYLGYVYIGLTG-SV 911
Query: 892 HMISAAVKGLARLAYEFSDLV--SNVYKLLPSTFLLLQRKNREIIKANLGLLKVLVAKSH 949
+I+ V L RL + + D + S++ LL + LLL + R+I+KA+LG LKV++
Sbjct: 912 TLITCTVLALTRLIFHYKDSIDLSSLELLLQNVCLLLTSRTRDIVKASLGFLKVIIFSLD 971
Query: 950 AEGLQIHLASMVEGLLKWQDDTKNQFKSKIKLLLEMLVKKCGLDAVKAVMPEEHMXXXXX 1009
+ L H+ ++EG+ +D + F+ K+K + L++K G + VK+++P E
Sbjct: 972 VKVLAGHVNVIMEGISN-MNDMRRHFRVKLKNIYTKLIRKFGFELVKSMLPAEQHKVLGN 1030
Query: 1010 XXXXXXXXXXXXATKTEDTKSHFSKTTTSRLSRWNHTKIFSDFGDEGSEGSDA-EYMDVG 1068
TKTE+ +S T + I + S+ SD E G
Sbjct: 1031 IRKSEARNKKRKLTKTEEDESD----TEDGKPKVKGESIEDILAETDSDDSDEDEKRKKG 1086
Query: 1069 TVSGQGSKASPQLKSKVST--LRLKKKRKADKIXXXXXXXXXXXXXXXXXXRQKTRSALR 1126
K LK VS L + A ++ K S R
Sbjct: 1087 QKKPMKKKGQAWLKEGVSDEPLNFLDPKAAQRVLATNPNLKKATKADHGF---KVTSDGR 1143
Query: 1127 SSEHLKQKTESDDEPEIDSEGRL--IIHE-GRKPKKVKPSNP---DLDGRSEAGSMMSRP 1180
+K++ + D E E + + ++ E G K KK P DLD + +
Sbjct: 1144 LI--IKEEDDDDYEEEKTKDAEMDDVLEEAGVKTKK-NPKRKIAADLDDDMDVEPALKYK 1200
Query: 1181 SSRKTQKRRKTSESGWAYTGSEYASKKASGDVKRKGKLEPYAYWPMDRKLMSRRPEHRAA 1240
+ R G G+EY SKK GD+K+ GK +PYAY P+ + ++RR + +
Sbjct: 1201 AGGIGIHRPL---GGRPEIGTEYKSKKGKGDIKKAGKCDPYAYIPLKKSQLNRRKKAKLQ 1257
Query: 1241 AR-KGMASVVK 1250
+ KGM K
Sbjct: 1258 GQFKGMVRGAK 1268
Score = 382 (139.5 bits), Expect = 3.3e-74, Sum P(3) = 3.3e-74
Identities = 126/476 (26%), Positives = 212/476 (44%)
Query: 149 WSDVS--QLYGVVLAFMTDSRLKVRR--QSHLC--VR--EILLSLQGTLVLAPASEAITN 200
WS S Q+Y +L+F S+ KVR+ Q +C +R + + S PA+ +
Sbjct: 225 WSYPSTLQVYHGLLSFTVHSKPKVRKAAQQGICSVLRYSDFMFS-DNAPNHHPAAVSTAK 283
Query: 201 MFEKFLLLAGGSNTSADEKPKGAQEVLYVLDALKECL---PLMSTKYTAVILKYFKTLLE 257
K L +GGS K L++L LK+ L PL S K L TL
Sbjct: 284 FCCKELEQSGGS--------KEDTTTLHILGLLKDLLSAFPLSSVKSCCETLLRVMTLSH 335
Query: 258 LRQPLVTRRVTDALNVICLH-PTLEVXXXXXXXXXXXXXXXVSTNETSADAMTFTARLLN 316
+ LVT A + + + P+ +E + ++
Sbjct: 336 V---LVTAHAMQAFHKLFISKPSTSSMSAELNAQIITALYDYVPSENDLQPLLAWLAVME 392
Query: 317 VGMIKIYSINREICSTKLPIVFNALKDILASEHEEAIFAATEALKNLINACIDESLIKQG 376
+ + S+ +C LP +F+ L S H + + AA +K LIN C+ + + G
Sbjct: 393 KAHVHLSSLQSSLCLGHLPRLFSVTMSCLLSPHTQVVSAAASTMKTLINDCVASHMAEIG 452
Query: 377 VDQITNVNSDARKSGPTVIEKICATVESLLDYHYSAVWDMAFQIVSTMFDKLGTYSSYFM 436
Q N +S +G V+ K+ VE L Y + A W +I+ + G + M
Sbjct: 453 PVQ-PNTSSG---NGACVL-KMFHIVEEGLSYRFHASWPFVLKILGCFYRAAGKQAHPIM 507
Query: 437 RGALKNLADMQNLPDEDFPYRKQLHECVGSAVGSMGPETFLCLLPLKLEASD--LSEVNV 494
+L++L+D++ P FP+ +L VG AV SMGPE L +PL + +D L
Sbjct: 508 IKSLQSLSDLRATPQ--FPFTGELDLAVGGAVESMGPEVVLNAVPLLITGTDDDLEFPRS 565
Query: 495 WLFPILKQYIIGARLNFFMEKLLGMAKLIGQKSQKFELEGRVFSSRSADALVYSLWSLLP 554
WL P+++ ++ ++L +F +A + Q + + E G+ ++ L +W++LP
Sbjct: 566 WLIPVIRDHVKNSQLAYFNSHFFPLANKLKQTADELEQSGQKLMAKVYQTLQMQIWTMLP 625
Query: 555 SFCNYPVDTAESFMDLAGVLCSALHEENDIRGIICSSLQNLIQQNKKTLEGKNDLS 610
FC P D SF +A L AL++ D+R IC +L+ LI ++ +T E K +++
Sbjct: 626 GFCTKPTDLLVSFKGIARSLGMALNDRPDLRMCICQALRTLINKSCETEEEKAEMN 681
Score = 53 (23.7 bits), Expect = 3.3e-74, Sum P(3) = 3.3e-74
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 36 HQHLCAAIGAMSQELKDQNLPLTPISYFGA 65
H+ +CA + A+++ ++ Q T YF A
Sbjct: 117 HKEICAVLAAVTEVIRSQGGKETETEYFAA 146
Score = 39 (18.8 bits), Expect = 6.0e-30, Sum P(3) = 6.0e-30
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 677 EIVTRLFKRTMHRLLEATQEAGKTKSTRKSNSMQIDDSSNE 717
E+V + H++L +++ RK + D+S E
Sbjct: 1014 ELVKSMLPAEQHKVLGNIRKSEARNKKRKLTKTEEDESDTE 1054
>MGI|MGI:2147437 [details] [associations]
symbol:Rrp12 "ribosomal RNA processing 12 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR016024 MGI:MGI:2147437 GO:GO:0016021 SUPFAM:SSF48371
GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0031965
CTD:23223 eggNOG:NOG149372 HOGENOM:HOG000006643 HOVERGEN:HBG080767
KO:K14794 OrthoDB:EOG4VMFDK InterPro:IPR012978 Pfam:PF08161
GeneTree:ENSGT00390000013106 OMA:LLCVFFE EMBL:AK122346
EMBL:BC056232 EMBL:BC062977 IPI:IPI00420344 RefSeq:NP_955518.1
UniGene:Mm.276044 ProteinModelPortal:Q6P5B0 SMR:Q6P5B0
STRING:Q6P5B0 PhosphoSite:Q6P5B0 PaxDb:Q6P5B0 PRIDE:Q6P5B0
Ensembl:ENSMUST00000038677 GeneID:107094 KEGG:mmu:107094
InParanoid:Q6P5B0 NextBio:358574 Bgee:Q6P5B0 Genevestigator:Q6P5B0
GermOnline:ENSMUSG00000035049 Uniprot:Q6P5B0
Length = 1295
Score = 405 (147.6 bits), Expect = 5.1e-74, Sum P(4) = 5.1e-74
Identities = 145/606 (23%), Positives = 248/606 (40%)
Query: 154 QLYGVVLAFMTDSRLKVRRQSHLCVREILLSLQGTL-VLAPASEAITNMFEKFLLLAGGS 212
Q+Y +L+F ++ K+R+ + V +L APA KF +
Sbjct: 236 QVYHGLLSFTVHAKPKIRKAAQHGVCSVLKGSDFMFGEKAPAHHPAAVSTAKFCI----Q 291
Query: 213 NTSADEKPKGAQEVLYVLDALKECLPLMSTKYTAVILKYFKTLLELRQPLVTRRVTDAL- 271
K A L++L LK+ LP + ++ L LVT A
Sbjct: 292 EIEKSGGSKEATTTLHMLTLLKDMLPCFPEGLVKSCSETLLRVMTLNHVLVTACAMQAFH 351
Query: 272 NVICLHPTLEVXXXXXXXXXXXXXXXVSTNETSADAMTFTARLLNVGMIKIYSINREICS 331
N+ P+ +E + +++ I + + R++
Sbjct: 352 NLFHAKPSPSTLSAELNAQIVTALYDYVPSENDLQPLLAWLKVMEKAHINLVRLQRDLGL 411
Query: 332 TKLPIVFNALKDILASEHEEAIFAATEALKNLINACIDESLIKQGVDQITNVNSDARKSG 391
L F L S H + AAT+ LK ++ C+ + G +V S A SG
Sbjct: 412 GHLARFFGTAVTCLLSPHSQVAAAATQTLKEILKECVAPHIADIG-----SVTSSA--SG 464
Query: 392 PT-VIEKICATVESLLDYHYSAVWDMAFQIVSTMFDKLGTYSSYFMRGALKNLADMQNLP 450
P I K+ VE L Y + A W Q++ F+ G + M+ L++L D++ P
Sbjct: 465 PPQYITKMFRAVEEGLTYKFHAAWSSVLQLLGVFFEACGKQAHPVMKKCLQSLCDLRLSP 524
Query: 451 DEDFPYRKQLHECVGSAVGSMGPETFLCLLPLKLEASD--LSEVNVWLFPILKQYIIGAR 508
FP+ L + VG+AV SMGPE L +PL+++ S+ L WL P+++ ++ R
Sbjct: 525 H--FPHTAALDQAVGAAVTSMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVRETR 582
Query: 509 LNFFMEKLLGMAKLIGQKSQKFELEGRVFSSRSADALVYSLWSLLPSFCNYPVDTAESFM 568
L FF L +A + +K+ G S+ D L + +W+LLP FC P D A SF
Sbjct: 583 LGFFTTYFLPLATTLKRKAMDLAQAGSTVESKIYDTLQWQIWTLLPGFCTRPTDVAASFK 642
Query: 569 DLAGVLCSALHEENDIRGIICSSLQNLIQQNKKTLEGKNDLSN-------VVISTASQRA 621
LA L +A++E D+R +C +L+ LI + + + ++S ++ + Q
Sbjct: 643 GLARTLGTAINERPDLRVTVCQALRTLITKGCEAEADRAEVSRFAKNFLPILFNLYGQPV 702
Query: 622 MAHYTTKVATDNLNVLKSSARELLSILSRIFLESAKDEGGCLQSTIGDFASIADKEIVTR 681
A L +K+ + L FLE A ++ L DF ++ ++V
Sbjct: 703 AAGEAAAPRRAVLETIKTYLTITEAQLVNSFLEKATEK--VLDPASSDFTRLSVLDLVVA 760
Query: 682 LF----KRTMHRLLEATQE--AGKTKSTRKSNSMQIDD---SSNESSPDFMRARLFDLAL 732
L + + +L + K +K +++ SS + F+++ L DL
Sbjct: 761 LAPYSDEAAISKLYSTIRPYLESKVHGVQKKAYRVLEEVCASSQGPAARFVQSHLDDLKK 820
Query: 733 SLLPGL 738
+LL L
Sbjct: 821 TLLDSL 826
Score = 343 (125.8 bits), Expect = 5.1e-74, Sum P(4) = 5.1e-74
Identities = 89/293 (30%), Positives = 153/293 (52%)
Query: 718 SSPDFMRARLFDLALSLLPGLNAKEIDVLFVAIKPALQDDEGLIQKKAYKVLSTILRKCD 777
+S DF R + DL ++L P + I L+ I+P L+ +QKKAY+VL +
Sbjct: 745 ASSDFTRLSVLDLVVALAPYSDEAAISKLYSTIRPYLESKVHGVQKKAYRVLEEVCASSQ 804
Query: 778 G----FLSSRLEELLGLMIEVLPSCHFSAKRHRLDCLYFIIAHVSKDDSEQRRSYILSSF 833
G F+ S L++L +++ L + AKR RL CL I+ +S + E +++
Sbjct: 805 GPAARFVQSHLDDLKKTLLDSLRTTSSPAKRPRLKCLIHIVKTLSAEHEE-----FIAAL 859
Query: 834 LTEIILALKEANKRTRNRAYDVLVQIGRAFGDEENGGGKEN-LYQFFNMVAGGLAGESPH 892
+ E+IL KE + R A+ +LV++G AF G +E+ L ++ ++ GL G +
Sbjct: 860 IPEVILCTKEVSVGARKSAFTLLVEMGHAF--LRFGSNQEDALQRYLVLIYPGLLG-AVT 916
Query: 893 MISAAVKGLARLAYEFSDLV--SNVYKLLPSTFLLLQRKNREIIKANLGLLKVLVAKSHA 950
+S ++ L L +EF L+ S V +LL + LLL + R+++K+ LG +KV V
Sbjct: 917 TVSCSILALTHLLFEFKGLMGTSTVEQLLENVCLLLASRTRDVVKSALGFIKVAVVVMDV 976
Query: 951 EGLQIHLASMVEGLLKWQDDTKNQFKSKIKLLLEMLVKKCGLDAVKAVMPEEH 1003
L H+ ++E + K DD + F+ K++ L +K G + VK ++P E+
Sbjct: 977 VHLAKHVQLVMEAIGKLSDDMRRHFRMKLRNLFIKFTRKFGFELVKGLLPAEY 1029
Score = 142 (55.0 bits), Expect = 5.1e-74, Sum P(4) = 5.1e-74
Identities = 45/138 (32%), Positives = 72/138 (52%)
Query: 1135 TESDDEPEIDSEGRLIIHEGRKPKKVKPSNPD---LDGRSEAG-SMMSRPSSRKTQKRRK 1190
T+ +DE D+ + +K K+ + D + R +AG S + RP ++K
Sbjct: 1170 TKGEDEDMTDAMEDASVRSKKKLKRQREDEEDELEIPPRYQAGGSGIHRPVAKK------ 1223
Query: 1191 TSESGWAYTGSEYASKKASGDVKRKGKLEPYAYWPMDRKLMSRRPEHRAAAR-KGMASVV 1249
A G+EY +KKA GDVK+KG+L+PYAY P++R ++RR + + + KG+ V
Sbjct: 1224 ------AAPGAEYKAKKAKGDVKKKGRLDPYAYVPLNRSKLNRRKKVKLQGQFKGL---V 1274
Query: 1250 KLTKKLEGKSASSALSMK 1267
K T++ G A L K
Sbjct: 1275 KATQR--GSQAGHKLRRK 1290
Score = 53 (23.7 bits), Expect = 5.1e-74, Sum P(4) = 5.1e-74
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 36 HQHLCAAIGAMSQELKDQNLPLTPISYFGA 65
H+ +CA + A+++ ++ Q T YF A
Sbjct: 121 HKEICAVLAAVTEVIRSQGGKETETEYFAA 150
Score = 47 (21.6 bits), Expect = 4.1e-64, Sum P(4) = 4.1e-64
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 1142 EIDSEGRLIIHEGRKPKKVKPSNPDLDGRSEAGSMMSRPS--SRKTQKRRKTSE 1193
++ ++GRLII E KV+ + + M S S+K KR++ E
Sbjct: 1146 KLSADGRLIIREEEDGNKVEEEDGTKGEDEDMTDAMEDASVRSKKKLKRQREDE 1199
Score = 46 (21.3 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 17/84 (20%), Positives = 40/84 (47%)
Query: 152 VSQLYGVVLAFMTDSRLKVRRQSHLCVREILLSLQGTLVLAPASEAITNMFE--KFLLLA 209
+S+LY + ++ V+++++ + E+ S QG PA+ + + + K LL
Sbjct: 770 ISKLYSTIRPYLESKVHGVQKKAYRVLEEVCASSQG-----PAARFVQSHLDDLKKTLLD 824
Query: 210 GGSNTSADEKPKGAQEVLYVLDAL 233
TS+ K + +++++ L
Sbjct: 825 SLRTTSSPAKRPRLKCLIHIVKTL 848
Score = 45 (20.9 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 1062 AEYMDVGTVSGQGSKASPQLKSKVSTLRLKKKRKADKI 1099
A Y D +S S P L+SKV ++ K R +++
Sbjct: 762 APYSDEAAISKLYSTIRPYLESKVHGVQKKAYRVLEEV 799
Score = 41 (19.5 bits), Expect = 1.7e-63, Sum P(4) = 1.7e-63
Identities = 15/76 (19%), Positives = 31/76 (40%)
Query: 1122 RSALRSSEH--LKQKTESDDEPEIDSEGRLIIHEGRKPKKVKPSNPDLDGRSEAGSMMSR 1179
++ R+ +H L Q ++E E + E + +G +++ + D D E G +
Sbjct: 1038 KAETRAKKHRALSQAAVEEEEEE-EEEEEPVQSKGDSIEEILADSEDEDEEEERGRGKEQ 1096
Query: 1180 PSSRKTQKRRKTSESG 1195
+ + R E G
Sbjct: 1097 RKLARQRSRAWLKEGG 1112
Score = 37 (18.1 bits), Expect = 2.0e-35, Sum P(4) = 2.0e-35
Identities = 18/64 (28%), Positives = 25/64 (39%)
Query: 149 WSDVSQLYGVVLAFMTDSRLKVRRQ--SHLCVREILLSLQGTLVLAPA-SEAITNMFEKF 205
WS V QL GV V ++ LC + T L A A+T+M +
Sbjct: 488 WSSVLQLLGVFFEACGKQAHPVMKKCLQSLCDLRLSPHFPHTAALDQAVGAAVTSMGPEV 547
Query: 206 LLLA 209
+L A
Sbjct: 548 VLQA 551
>DICTYBASE|DDB_G0280797 [details] [associations]
symbol:DDB_G0280797 "putative ribosomal RNA
processing protein RRP19" species:44689 "Dictyostelium discoideum"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000418
InterPro:IPR016024 PROSITE:PS50061 dictyBase:DDB_G0280797
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0043565
GO:GO:0003700 EMBL:AAFI02000038 eggNOG:NOG149372 KO:K14794
InterPro:IPR012978 Pfam:PF08161 RefSeq:XP_641035.1
EnsemblProtists:DDB0204738 GeneID:8622737 KEGG:ddi:DDB_G0280797
InParanoid:Q54UV2 OMA:HAAMTMK Uniprot:Q54UV2
Length = 1427
Score = 516 (186.7 bits), Expect = 2.8e-63, Sum P(6) = 2.8e-63
Identities = 152/552 (27%), Positives = 277/552 (50%)
Query: 308 MTFTARLLNVGMIKIYSINREICSTKLPIVFNALKDILASEHEEAIFAATEALKNLINAC 367
+++T LL + + ++C+ + F+ L + S+ E K++I C
Sbjct: 299 VSYT-ELLTQSYLYFVKLEPKLCNQHVHKYFSILMNNFGSDKAEITKCTMNGFKSVIYEC 357
Query: 368 IDESLIKQGVDQITNVNSDA-RKSGPTVIEKICATVESLLDYHYSAVWDMAFQIVSTMFD 426
I+ +I+QG+ + +A R+ P +E I +T+ES L + + WD+ I+S +F+
Sbjct: 358 INLEVIQQGIYSFQQGSGNANRELSP--LESIISTIESGLRLTFKSSWDLVLMIISALFE 415
Query: 427 KLGTYSSYFMRGALKNLADMQNLPDEDFPYRKQLHECVGSAVGSMGPETFLCLLPLKLEA 486
+LG + M L L + + P+ F ++ + + S+GP+ FL +LPL LE+
Sbjct: 416 QLGPNAYPIMNNTLAGLDQLYHSPE--FHFQTHCRQVFIQVLSSIGPKNFLKILPLNLES 473
Query: 487 --SDLSEVNV-WLFPILKQYIIGARLNFFMEKLLGMAKLIGQKSQKFELEGRVFSSRSAD 543
+D ++N WL P+++ I +L+FF+E MA + ++ ++ E++GR+ +++ +
Sbjct: 474 HPNDKIKINRNWLLPLMRDNIKYTQLSFFIEYFYPMAIAMKERGKQVEMDGRLVEAKNLE 533
Query: 544 ALVYSLWSLLPSFCNYPVDTAESFMDLAGVLCSALHEENDIRGIICSSLQNLIQQNKKTL 603
L +W LLP F N+P+D+ SF +A L AL +E +R +IC++L +I + K T
Sbjct: 534 ILYSQVWDLLPGFLNHPLDSDVSFRVIARNLGVALSDEPGLRIVICAALTQMINKLKDTQ 593
Query: 604 EGKNDLSNVVISTASQRAMAHYTTKVATDNLNVLKSSARELLSILSRIFLESAKDEGGCL 663
K V I Q + T + AT L + ++ L IL IF S +D+ +
Sbjct: 594 ITKPP---VYIPLRKQHHLV--TQERATQLLKSVSVFSKNYLPILFNIFPTSNQDQRYYI 648
Query: 664 QSTIGDFASIADKEIVTRLFKRTMHRLLEA-TQEAGKTKSTRKSNSMQIDDSSNESSPDF 722
+ I SI D + +F + +L+EA T E + K T+ NSM ++ ++
Sbjct: 649 LNAIEALVSITDSINLNTIFNSLITKLVEALTLEGIEKKPTQ--NSMDTTTTTTTTTTPK 706
Query: 723 MRAR---LFDLALSLLPGLNAKEIDVLFVAIKPALQ-DDEGLIQKKAYKVLSTILRKCDG 778
+ + L DL + + L+ + I VL+ IKP L+ D GL QK++YK+L I +
Sbjct: 707 EKTKKYYLTDLTIGFVKHLDEENIKVLYKIIKPQLKCSDPGL-QKRSYKILVKICEYHES 765
Query: 779 FLSSRLEELLGLMIEVLPSCHFSAKRHRLDCLYFIIAHVSKDDSEQRRSYILSSFLTEII 838
F+ L ++ L++ L + K+ RL CL II ++K + ++L+ E++
Sbjct: 766 FILQNLTKIKALLVSNLMQSPSTIKKTRLKCLREIIISLTKSSYNK---HLLTEEELELV 822
Query: 839 LALKEANKRTRN 850
A+ E K+ N
Sbjct: 823 -AINENEKQLEN 833
Score = 221 (82.9 bits), Expect = 2.8e-63, Sum P(6) = 2.8e-63
Identities = 45/133 (33%), Positives = 84/133 (63%)
Query: 873 ENLYQFFNMVAGGLAGESPHMISAAVKGLARLAYEF-SDLVSN-VYKLLPSTFLLLQRKN 930
E ++++ ++ GLA +PHM+SA++ +AR+ +EF D+ V +L+ + +LL +
Sbjct: 931 EAIHEYLQLMMAGLASITPHMVSASIVSIARVIHEFYRDINEEFVGQLVTTVLVLLASPH 990
Query: 931 REIIKANLGLLKVLVAK-SHAEGLQIHLASMVEGLLKWQDDTKNQFKSKIKLLLEMLVKK 989
REI+KA GL++V++A + ++ L +V GL KW KN F++ +++LLE L+K+
Sbjct: 991 REIVKAVFGLVRVVIATFKDTKSIESQLEVLVNGLAKWGGIDKNYFRTIVQILLERLIKR 1050
Query: 990 CGLDAVKAVMPEE 1002
G D + ++PE+
Sbjct: 1051 FGFDQIYQLVPED 1063
Score = 117 (46.2 bits), Expect = 1.3e-52, Sum P(6) = 1.3e-52
Identities = 46/186 (24%), Positives = 90/186 (48%)
Query: 824 QRRSYILSSFLTEIILALKEANKRTRNRAYDVLVQIGRAF------------G----DEE 867
Q ++ + S + EIIL KE N + R A +++++IG+ G D
Sbjct: 866 QLKTKFIPSLIPEIILCTKETNVKCREIANELIIEIGKVMCLISAKLVKPKKGVSMEDTI 925
Query: 868 NGGGKENLYQFFNMVAGGLAGESPHMISAAVKGLARLAYEFSDLVSNVYKLLPSTFLLLQ 927
E ++++ ++ GLA +PHM+SA++ +AR+ +EF Y+ +
Sbjct: 926 TIAHNEAIHEYLQLMMAGLASITPHMVSASIVSIARVIHEF-------YRDI-------- 970
Query: 928 RKNREIIKANLGLLKVLVAKSHAEGLQIHLASMVEGLLKWQDDTKNQFKSKIKLLLEMLV 987
N E + + + VL+A H E ++ + +V ++ DTK+ +S++++L+ L
Sbjct: 971 --NEEFVGQLVTTVLVLLASPHREIVKA-VFGLVRVVIATFKDTKS-IESQLEVLVNGLA 1026
Query: 988 KKCGLD 993
K G+D
Sbjct: 1027 KWGGID 1032
Score = 60 (26.2 bits), Expect = 2.8e-63, Sum P(6) = 2.8e-63
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 1207 KASGDV-KRKGKLEPYAYWPMDRKLMSRR 1234
K GD KR K EPY+Y +D K +++R
Sbjct: 1381 KTKGDNRKRDQKFEPYSYIKLDPKALNKR 1409
Score = 49 (22.3 bits), Expect = 1.1e-13, Sum P(6) = 1.1e-13
Identities = 30/161 (18%), Positives = 67/161 (41%)
Query: 533 EGRVFSSRSADALVYSLWSLLPSFCNYPVDTAES---FMDLAGVLCSALHEENDIRGIIC 589
E + +++ D L L+SL+ + P+ +S + + +L + +E + +
Sbjct: 57 ENKHKENQTPDLL--KLFSLILPQVSIPIIKNQSVNIILQMINILEKYVTQETTLNSTMS 114
Query: 590 SSLQNLIQQNKKTLEGKNDLSNV-VISTASQRAMAHYTTKVATDNLN--VLKSSARELLS 646
+ Q+L++ L L+ ST Y K++ +N + + +A +++
Sbjct: 115 NDEQSLVKSGTYILGYVLVLAESNQWSTPEYLRGYSYILKLSVNNQQSKIRQKAAEQVIL 174
Query: 647 ILSRIFLESAKDEGGCLQSTIGDFASIADKEIVTRLFKRTM 687
+L+ I +GG + + + S EI T + TM
Sbjct: 175 VLNSIGAIQTNAKGGGVHKHLANVTSQFSHEIFTNVTHETM 215
Score = 48 (22.0 bits), Expect = 3.2e-62, Sum P(5) = 3.2e-62
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 1158 KKVKPSNPDLDGRSEAGSMMSRPSSRKTQKRRKTSESGWAYTGSEYASKKASGD--VKRK 1215
K P D DGR S S +K ++ RK S + +E A ++ +G K K
Sbjct: 1212 KLQNPFQLDEDGRMIIESSDSEDEGQKRKRERKKSFLDQVFEENEEAYERKAGYHVTKAK 1271
Query: 1216 G 1216
G
Sbjct: 1272 G 1272
Score = 44 (20.5 bits), Expect = 5.9e-13, Sum P(5) = 5.9e-13
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 39 LCAAIGAMSQELKDQNLPLTPI 60
+CAA+ M +LKD + P+
Sbjct: 578 ICAALTQMINKLKDTQITKPPV 599
Score = 43 (20.2 bits), Expect = 2.8e-63, Sum P(6) = 2.8e-63
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 238 PLMSTKYTAVILKYFKTLLELRQPLVTRRVTDALNVICLHP 278
PL Y A+ +FKT PL+ + + V+ HP
Sbjct: 254 PLTIACYKAIGSLFFKT-----NPLIGSHIQQLIEVLFQHP 289
Score = 43 (20.2 bits), Expect = 1.1e-13, Sum P(6) = 1.1e-13
Identities = 7/32 (21%), Positives = 19/32 (59%)
Query: 766 YKVLSTILRKCDGFLSSRLEELLGLMIEVLPS 797
YK + ++ K + + S +++L+ ++ + PS
Sbjct: 260 YKAIGSLFFKTNPLIGSHIQQLIEVLFQHPPS 291
Score = 41 (19.5 bits), Expect = 3.8e-63, Sum P(5) = 3.8e-63
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 215 SADEKPKGAQEVLY-VLDALK-ECLPLMSTKYTAVILK 250
S+ E K VL V D ++ P+ +T Y A+ILK
Sbjct: 16 SSSETNKRLYAVLTAVTDLIRFNKAPINATSYFAIILK 53
Score = 41 (19.5 bits), Expect = 6.6e-45, Sum P(6) = 6.6e-45
Identities = 21/96 (21%), Positives = 36/96 (37%)
Query: 958 ASMVEGLLKWQDDTKNQFKSKIKLLLEMLVKKCGLDAVKAVMPEEHMXXXXXXXXXXXXX 1017
A +V L++ K K+++K L E+++ K ++ EE +
Sbjct: 776 ALLVSNLMQSPSTIK---KTRLKCLREIIISLTKSSYNKHLLTEEELELVAINENEKQLE 832
Query: 1018 XXXXATKTEDTKSHFSKTTTSRLSRWNHTKIFSDFG 1053
T T T TTT+ S N K+ + G
Sbjct: 833 NTTTTTTTTTTT-----TTTTTTSTDNKPKVKVNIG 863
Score = 41 (19.5 bits), Expect = 5.9e-13, Sum P(5) = 5.9e-13
Identities = 7/35 (20%), Positives = 23/35 (65%)
Query: 151 DVSQLYGVVLAFMTDSRLKVRRQSHLCVREILLSL 185
+++++ ++++ + S +++ C+REI++SL
Sbjct: 770 NLTKIKALLVSNLMQSPSTIKKTRLKCLREIIISL 804
Score = 40 (19.1 bits), Expect = 2.8e-63, Sum P(6) = 2.8e-63
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 32 AQEEHQHLCAAIGAMSQELKDQNLPLTPISYF 63
+ E ++ L A + A++ ++ P+ SYF
Sbjct: 17 SSETNKRLYAVLTAVTDLIRFNKAPINATSYF 48
Score = 40 (19.1 bits), Expect = 8.1e-45, Sum P(5) = 8.1e-45
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 818 SKDDSEQRRSYILSSFLTEIILALKEANKR 847
S+D+ ++R+ SFL ++ +EA +R
Sbjct: 1232 SEDEGQKRKRERKKSFLDQVFEENEEAYER 1261
Score = 39 (18.8 bits), Expect = 2.8e-63, Sum P(6) = 2.8e-63
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1163 SNPDLDGRSEAGSMMSRPSSRKTQKRRKTSESG 1195
SN ++D E G S+K +K + TS G
Sbjct: 1093 SNENMD---ENGDDSKSQKSKKNKKSKNTSGGG 1122
Score = 39 (18.8 bits), Expect = 9.3e-13, Sum P(5) = 9.3e-13
Identities = 14/64 (21%), Positives = 25/64 (39%)
Query: 212 SNTSADEKPKGAQEVLYVLDALKECLPLMSTKYTAVILKYFKTLLELRQPLVTRRVTDAL 271
+ T+ PK + Y+ D + + + V+ K K L+ P + +R L
Sbjct: 697 TTTTTTTTPKEKTKKYYLTDLTIGFVKHLDEENIKVLYKIIKPQLKCSDPGLQKRSYKIL 756
Query: 272 NVIC 275
IC
Sbjct: 757 VKIC 760
>CGD|CAL0001929 [details] [associations]
symbol:orf19.7011 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005816
"spindle pole body" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR016024 CGD:CAL0001929 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AACQ01000024
eggNOG:NOG149372 KO:K14794 InterPro:IPR012978 Pfam:PF08161
RefSeq:XP_720305.1 RefSeq:XP_888733.1 ProteinModelPortal:Q5AFQ7
STRING:Q5AFQ7 GeneID:3638019 GeneID:3704217 KEGG:cal:CaO19.7011
KEGG:cal:CaO19_7011 Uniprot:Q5AFQ7
Length = 1217
Score = 642 (231.1 bits), Expect = 2.7e-59, Sum P(3) = 2.7e-59
Identities = 194/758 (25%), Positives = 364/758 (48%)
Query: 325 INREICSTKLPIVFNALKDILASEHEEAIFAATEALKNLINACIDESLIKQGVDQITNVN 384
++ E C +KLP V + L+SE ++ +A++ L +++ I + + Q +
Sbjct: 330 LSPESCISKLPTVLPIVSSYLSSESKDIYSSASQCLIAIVSQSIPDKFLLQP-SPTNGIT 388
Query: 385 SDARKSGPTVIEKICATVESLL-DYHY-SAVWDMAFQIVSTMFDKLGTYSSYFMRGALKN 442
+ ++ I I +E +L Y +A D+ +T+ KL + ++ LKN
Sbjct: 389 GEIYETVDDAITYISKMIEDILFSIKYQNATKDILEFTTATIL-KLRSRANPDFLDVLKN 447
Query: 443 LADMQNLPDEDFPYRKQLHECVGSAVGSMGPETFLCLLPLKLEASDLSEVNVWLFPILKQ 502
+ D + ++FPY K+ + + +++ SMGPE L +LPL L + WL P+L+
Sbjct: 448 VGDWRTNETDNFPYNKEAEDVIAASISSMGPEVVLSVLPLNLTGENGGPGRAWLLPLLRD 507
Query: 503 YIIGARLNFFMEKLLGMAKLIGQKSQKFELEGRVFSSRSADALVYSLWSLLPSFCNYPVD 562
+ A L+F+ +L + K ++ + + +S+ +V +WSLLP FC+ P D
Sbjct: 508 NVRFAELDFYKNSILPNIEFFDTKIEQSNNKESI-NSKIFQTIVDQIWSLLPHFCDLPKD 566
Query: 563 TAESFMD-LAGVLCSALHEENDIRGIICSSLQNLIQQNKKTLEGKNDLSNVVISTASQRA 621
+F + A L + + ++R IC + + L++ N +G D ++++
Sbjct: 567 LTSAFDETFATKLSDLMFAKVELRVPICHAWRLLVESNVAYRDGALD-EDLLMQQ----- 620
Query: 622 MAHYTTKVATDNLNVLKSSARELLSILSRIFLESAKDEGGCLQSTIGDFASIADKEIVTR 681
+ + A N+ L + A +L++L +F + D G + TI + +I K+ +
Sbjct: 621 --EFPKEEARKNVGYLSTIAGNILTVLFNVFTYTVADSRGFVLETIETYLNIIPKDELAT 678
Query: 682 LFKRTMHRLLEAT-QEAGKTKSTRKSNSMQIDDSSNESSPDFMRARLFDLALSLLPGLNA 740
F + L +A +EAG+T ++ S S++ + D + A +A +P +
Sbjct: 679 TFDKVCGMLKQAMDEEAGQTSQQQQQQSKTDIPSTSITMMDLIVA----MA-KYVPESSH 733
Query: 741 KEIDVLFVAIKPALQDDEGLIQKKAYKVLSTILRKCDGFLS--SRLEELLGLMIEVLPSC 798
+ +FVA +++ L+QK+AY+++S + G S + E+ ++IE +
Sbjct: 734 NALFSIFVATVSLVKNP--LMQKRAYRIISRLAETETGKQSILKFIGEIERVLIETIEQT 791
Query: 799 HFSAKRHRLDCLYFIIAHVSKDDSEQRRSYILSSFLTEIILALKEANKRTRNRAYDVLVQ 858
H SA+ RL+ + ++ + D Y + + L EII+A K+ N+R+R +Y +L++
Sbjct: 792 HNSARSSRLNAILLVLELLPSTDL-----YFIPAILQEIIMATKDVNERSRGLSYQILIK 846
Query: 859 IGRAFGDE---ENG----------GGKENLYQFFNMVAGGLAGESPHMISAAVKGLARLA 905
+G+ + EN +L +FF MV+ GLA ++PHMISA + ++ L
Sbjct: 847 MGQKMNEGGVIENSRVPGFDSDAPNSSASLTEFFTMVSAGLAAQNPHMISATITAISCLI 906
Query: 906 YEFSDLV-SNVYKLLPSTF-LLLQRKNREIIKANLGLLKVLVAKSHAEGLQIHLASMVEG 963
+EF D++ ++V + ST L L +REI K+ +G +KV V E ++ +L+ ++
Sbjct: 907 FEFKDVLPTDVLLEIASTVELFLTHNSREIAKSAIGFVKVEVLSLPEEMVKQNLSDLLSK 966
Query: 964 LLKWQDDTKNQFKSKIKLLLEMLVKKCGLDAVKAVMPEEHMXXXXXXXXXXXXXXXXXAT 1023
L++W + K FKSK+K +LE L++K G++ V+ +PEE
Sbjct: 967 LMRWSHEHKGHFKSKVKHILERLIRKFGVEEVERCIPEEDKKLVANIKKSRNRAKRKQEA 1026
Query: 1024 KTEDTKSHFSKTTTSRLSRWNHTKIFSDFGDEGSEGSD 1061
+TE SKT S N K F +E SD
Sbjct: 1027 ETEAEGETGSKTAGSS---HNSEKKFVSAYEEALYDSD 1061
Score = 55 (24.4 bits), Expect = 2.7e-59, Sum P(3) = 2.7e-59
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 34 EEHQHLCAAIGAMSQELKDQNLPLTPISYF 63
+ +HL + A+ + +++Q TP++YF
Sbjct: 33 DNQKHLAIILSAVEENIEEQKNDKTPVAYF 62
Score = 39 (18.8 bits), Expect = 2.7e-59, Sum P(3) = 2.7e-59
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 1132 KQKTESDDEPEIDSEGRLIIHEGRKPKKVKPSNP 1165
+ + E D+ + D++ ++ +G+ K K S P
Sbjct: 1174 RSRNEEDNWSDDDADSTPVLKKGKTLGKSKISKP 1207
>UNIPROTKB|Q5AFQ7 [details] [associations]
symbol:CaO19.7011 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR016024 CGD:CAL0001929 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AACQ01000024
eggNOG:NOG149372 KO:K14794 InterPro:IPR012978 Pfam:PF08161
RefSeq:XP_720305.1 RefSeq:XP_888733.1 ProteinModelPortal:Q5AFQ7
STRING:Q5AFQ7 GeneID:3638019 GeneID:3704217 KEGG:cal:CaO19.7011
KEGG:cal:CaO19_7011 Uniprot:Q5AFQ7
Length = 1217
Score = 642 (231.1 bits), Expect = 2.7e-59, Sum P(3) = 2.7e-59
Identities = 194/758 (25%), Positives = 364/758 (48%)
Query: 325 INREICSTKLPIVFNALKDILASEHEEAIFAATEALKNLINACIDESLIKQGVDQITNVN 384
++ E C +KLP V + L+SE ++ +A++ L +++ I + + Q +
Sbjct: 330 LSPESCISKLPTVLPIVSSYLSSESKDIYSSASQCLIAIVSQSIPDKFLLQP-SPTNGIT 388
Query: 385 SDARKSGPTVIEKICATVESLL-DYHY-SAVWDMAFQIVSTMFDKLGTYSSYFMRGALKN 442
+ ++ I I +E +L Y +A D+ +T+ KL + ++ LKN
Sbjct: 389 GEIYETVDDAITYISKMIEDILFSIKYQNATKDILEFTTATIL-KLRSRANPDFLDVLKN 447
Query: 443 LADMQNLPDEDFPYRKQLHECVGSAVGSMGPETFLCLLPLKLEASDLSEVNVWLFPILKQ 502
+ D + ++FPY K+ + + +++ SMGPE L +LPL L + WL P+L+
Sbjct: 448 VGDWRTNETDNFPYNKEAEDVIAASISSMGPEVVLSVLPLNLTGENGGPGRAWLLPLLRD 507
Query: 503 YIIGARLNFFMEKLLGMAKLIGQKSQKFELEGRVFSSRSADALVYSLWSLLPSFCNYPVD 562
+ A L+F+ +L + K ++ + + +S+ +V +WSLLP FC+ P D
Sbjct: 508 NVRFAELDFYKNSILPNIEFFDTKIEQSNNKESI-NSKIFQTIVDQIWSLLPHFCDLPKD 566
Query: 563 TAESFMD-LAGVLCSALHEENDIRGIICSSLQNLIQQNKKTLEGKNDLSNVVISTASQRA 621
+F + A L + + ++R IC + + L++ N +G D ++++
Sbjct: 567 LTSAFDETFATKLSDLMFAKVELRVPICHAWRLLVESNVAYRDGALD-EDLLMQQ----- 620
Query: 622 MAHYTTKVATDNLNVLKSSARELLSILSRIFLESAKDEGGCLQSTIGDFASIADKEIVTR 681
+ + A N+ L + A +L++L +F + D G + TI + +I K+ +
Sbjct: 621 --EFPKEEARKNVGYLSTIAGNILTVLFNVFTYTVADSRGFVLETIETYLNIIPKDELAT 678
Query: 682 LFKRTMHRLLEAT-QEAGKTKSTRKSNSMQIDDSSNESSPDFMRARLFDLALSLLPGLNA 740
F + L +A +EAG+T ++ S S++ + D + A +A +P +
Sbjct: 679 TFDKVCGMLKQAMDEEAGQTSQQQQQQSKTDIPSTSITMMDLIVA----MA-KYVPESSH 733
Query: 741 KEIDVLFVAIKPALQDDEGLIQKKAYKVLSTILRKCDGFLS--SRLEELLGLMIEVLPSC 798
+ +FVA +++ L+QK+AY+++S + G S + E+ ++IE +
Sbjct: 734 NALFSIFVATVSLVKNP--LMQKRAYRIISRLAETETGKQSILKFIGEIERVLIETIEQT 791
Query: 799 HFSAKRHRLDCLYFIIAHVSKDDSEQRRSYILSSFLTEIILALKEANKRTRNRAYDVLVQ 858
H SA+ RL+ + ++ + D Y + + L EII+A K+ N+R+R +Y +L++
Sbjct: 792 HNSARSSRLNAILLVLELLPSTDL-----YFIPAILQEIIMATKDVNERSRGLSYQILIK 846
Query: 859 IGRAFGDE---ENG----------GGKENLYQFFNMVAGGLAGESPHMISAAVKGLARLA 905
+G+ + EN +L +FF MV+ GLA ++PHMISA + ++ L
Sbjct: 847 MGQKMNEGGVIENSRVPGFDSDAPNSSASLTEFFTMVSAGLAAQNPHMISATITAISCLI 906
Query: 906 YEFSDLV-SNVYKLLPSTF-LLLQRKNREIIKANLGLLKVLVAKSHAEGLQIHLASMVEG 963
+EF D++ ++V + ST L L +REI K+ +G +KV V E ++ +L+ ++
Sbjct: 907 FEFKDVLPTDVLLEIASTVELFLTHNSREIAKSAIGFVKVEVLSLPEEMVKQNLSDLLSK 966
Query: 964 LLKWQDDTKNQFKSKIKLLLEMLVKKCGLDAVKAVMPEEHMXXXXXXXXXXXXXXXXXAT 1023
L++W + K FKSK+K +LE L++K G++ V+ +PEE
Sbjct: 967 LMRWSHEHKGHFKSKVKHILERLIRKFGVEEVERCIPEEDKKLVANIKKSRNRAKRKQEA 1026
Query: 1024 KTEDTKSHFSKTTTSRLSRWNHTKIFSDFGDEGSEGSD 1061
+TE SKT S N K F +E SD
Sbjct: 1027 ETEAEGETGSKTAGSS---HNSEKKFVSAYEEALYDSD 1061
Score = 55 (24.4 bits), Expect = 2.7e-59, Sum P(3) = 2.7e-59
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 34 EEHQHLCAAIGAMSQELKDQNLPLTPISYF 63
+ +HL + A+ + +++Q TP++YF
Sbjct: 33 DNQKHLAIILSAVEENIEEQKNDKTPVAYF 62
Score = 39 (18.8 bits), Expect = 2.7e-59, Sum P(3) = 2.7e-59
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 1132 KQKTESDDEPEIDSEGRLIIHEGRKPKKVKPSNP 1165
+ + E D+ + D++ ++ +G+ K K S P
Sbjct: 1174 RSRNEEDNWSDDDADSTPVLKKGKTLGKSKISKP 1207
>SGD|S000005933 [details] [associations]
symbol:RRP12 "Protein required for export of the ribosomal
subunits" species:4932 "Saccharomyces cerevisiae" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA;TAS] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0005840 "ribosome" evidence=TAS] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=TAS] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR016024 SGD:S000005933 GO:GO:0005634
SUPFAM:SSF48371 GO:GO:0005730 GO:GO:0003723 GO:GO:0005840
EMBL:Z71255 EMBL:BK006949 EMBL:Z48483 EMBL:U33335 GO:GO:0030686
GO:GO:0000462 eggNOG:NOG149372 KO:K14794 InterPro:IPR012978
Pfam:PF08161 GeneTree:ENSGT00390000013106 OMA:LLCVFFE
OrthoDB:EOG4WQ49N PIR:S59681 RefSeq:NP_015313.1
ProteinModelPortal:Q12754 SMR:Q12754 DIP:DIP-6497N IntAct:Q12754
MINT:MINT-639557 STRING:Q12754 PaxDb:Q12754 PeptideAtlas:Q12754
PRIDE:Q12754 EnsemblFungi:YPL012W GeneID:856095 KEGG:sce:YPL012W
CYGD:YPL012w HOGENOM:HOG000164239 NextBio:981131
Genevestigator:Q12754 Uniprot:Q12754
Length = 1228
Score = 596 (214.9 bits), Expect = 9.0e-54, Sum P(3) = 9.0e-54
Identities = 200/770 (25%), Positives = 348/770 (45%)
Query: 333 KLPIVFNALKDILASEHEEAIFAATEALKNLINACIDESLIKQGVDQITNVNSDARKSGP 392
K+P VF+ + LASE E AA++ L ++++ + + L+ +V+ K+
Sbjct: 353 KIPGVFHIMCTYLASETPEVYQAASQCLISILSESVKDDLLLY----TPSVDEKVFKNVD 408
Query: 393 TVIEKICATVESLLDYHYSAVWDMAFQIVSTMFDKLGTYSS-YFMRGALKNLADMQNLPD 451
+I +I T L YS +I+ F+K S+ +F++ +LK + D + +
Sbjct: 409 EIISQIAKTFIDFLSIRYSHCSREILKILVAAFNKFRYRSNPHFLK-SLK-IVDTWRVNE 466
Query: 452 EDF-PYRKQLHECVGSAVGSMGPETFLCLLPLKLE-ASDLSEVNVWLFPILKQYIIGARL 509
E F R ++ +G+++ +MGPE L PL L+ S WL P+++ Y A L
Sbjct: 467 EQFMDLRNEIELVIGASISAMGPEMILAEAPLNLDNPSSERPGRAWLLPLIRDYTKNANL 526
Query: 510 NFFMEKLLGMAKLIGQKSQKFELEGRVFSSRSADALVYSLWSLLPSFCNYPVDTAESFMD 569
F +L K K K E R +V +WS LP FC P+D ESF D
Sbjct: 527 ATFQNELAPYIKSFQSKFDKVPEES--IQLRVFQTIVDQIWSTLPRFCELPMDLRESFTD 584
Query: 570 -LAGVLCSALHEENDIRGIICSSLQNLIQQNKKTLEGKNDLSNVVISTASQRAMAHYTTK 628
A L S L+ E ++R IC +L+ L + N E ++ NV++ QR +
Sbjct: 585 EFASELSSLLYSEVELRTTICHALKVLAESNVSYAE-ESSSHNVLLL---QR----FPIS 636
Query: 629 VATDNLNVLKSSARELLSILSRIFLESAKDEGGCLQSTIGDFASIADKEIVTRLFKRTMH 688
A N+ L + + LL++L ++ ++ + + TI + I KE + + F
Sbjct: 637 EAQKNIEYLSTKSTNLLAVLFNVYTQTTPNARSYILETIDQYLKITSKEDLEKTFNNV-- 694
Query: 689 RLLEATQEAGKTKSTRKSNSMQIDDSSN---ESSPDFMRARLFDLALSLLPGLNAKEIDV 745
G K NSM + S N E + A L DL + ++ L
Sbjct: 695 --------CGLLK-----NSMNEESSGNVNKEKKKPQLTATLLDLIICMITYLPVSSYSA 741
Query: 746 LFVAIKPALQDDEGLIQKKAYKVLSTI--LRKCDGFLSSRLEELLGLMIEVLPSCHFSAK 803
LF + + LIQK+AY++++ + L+ ++ + ++ +M++ S SAK
Sbjct: 742 LFSMFSLTVNSADALIQKRAYRIITKLSELKSGSTAVAQFISDIENVMVDSASSVQTSAK 801
Query: 804 RHRLDCLYFIIAHVSKDDSEQRRSYILSSFLTEIILALKEANKRTRNRAYDVLVQIGRAF 863
RL + I+ + D + +I+ + + E+IL+ K+ N+++R A+D L+ +GR
Sbjct: 802 AARLTAIKTIVELLPLDHLD----FIVRT-VAEVILSTKDVNEKSRETAFDTLICMGRKM 856
Query: 864 G--------------DEENGGGKENLYQFFNMVAGGLAGESPHMISAAVKGLARLAYEF- 908
D ++ +FF +++ GL GES HM+S+++ G A L +EF
Sbjct: 857 NEPNGIIKLFQIPGYDPTTPDQSSSISEFFKIISAGLIGESQHMVSSSITGYACLVFEFK 916
Query: 909 SDLVSNVYKLLPSTF-LLLQRKNREIIKANLGLLKVLVAKSHAEGLQIHLASMVEGLLKW 967
++L S + + T L L +REI+K+ +G KV V E ++ + ++ LL+W
Sbjct: 917 NELDSGILMDIYDTIELYLTSNSREIVKSAIGFTKVCVLGLPEELMRPKVPELLLKLLRW 976
Query: 968 QDDTKNQFKSKIKLLLEMLVKKCGLDAVKAVMPEEHMXXXXXXXXXXXXXXXXXATKTED 1027
+ FK+K+K ++E L+++ G D ++A PEE T
Sbjct: 977 SHEHTGHFKAKVKHIIERLIRRFGYDYIEANFPEEDRRLLTNIRKMRNRNKRKDEEVTTG 1036
Query: 1028 TKSHFSKTTTSR-LSRWNHTKIFSDFGDEGSEGSDAEYMDVGTVSGQGSK 1076
S + T SR +S ++ SD +E GSD E G G+K
Sbjct: 1037 V-SDVAATKGSRFMSAFDEAVYGSD--EENDNGSDQEENVAGGKMKNGAK 1083
Score = 46 (21.3 bits), Expect = 9.0e-54, Sum P(3) = 9.0e-54
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 1137 SDDEPEIDSEGRLIIHEGRKP 1157
+DD DSEG+L++ KP
Sbjct: 1123 NDDAFNFDSEGKLVVKGQPKP 1143
Score = 46 (21.3 bits), Expect = 9.0e-54, Sum P(3) = 9.0e-54
Identities = 25/106 (23%), Positives = 46/106 (43%)
Query: 176 LCVREILLSL--QGTLVLAPAS-EAITNMFEKFLLLAGGSNTSADEKPKGAQEVLYVLDA 232
LC ++LL + L AS E +MF K + S+ A+ K + ++ L
Sbjct: 264 LC--DVLLGVTKSSEQYLVSASFECFESMF-KTMAETTISSGLAENKYLRVLDTIFALKP 320
Query: 233 LKECLPLMSTKYTAVILKYFKTLLELRQPL-VTRRVTDALNVICLH 277
L++ + AV++K T QPL R++ +++C +
Sbjct: 321 -SNVDTLLTKSWIAVVIKGMSTYAT-HQPLKALRKIPGVFHIMCTY 364
Score = 43 (20.2 bits), Expect = 1.8e-53, Sum P(3) = 1.8e-53
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 256 LELRQPLVTRRVTDALNVICLHP 278
L++R P V +R DA++ + L+P
Sbjct: 169 LDVR-PKVRKRALDAVHAVLLNP 190
Score = 41 (19.5 bits), Expect = 3.0e-53, Sum P(3) = 3.0e-53
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 159 VLAFMTDSRLKVRRQSHLCVREILLSLQGTLVLAPASEAITNMF 202
+L D R KVR+++ V +LL+ +AP +E + +F
Sbjct: 164 ILELSLDVRPKVRKRALDAVHAVLLNPP----VAPTAEHVAAVF 203
>ASPGD|ASPL0000000189 [details] [associations]
symbol:AN6200 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0044732
"mitotic spindle pole body" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BN001301 EMBL:AACD01000105 eggNOG:NOG149372
KO:K14794 InterPro:IPR012978 Pfam:PF08161 OMA:LLCVFFE
OrthoDB:EOG4WQ49N HOGENOM:HOG000164239 RefSeq:XP_663804.1
ProteinModelPortal:Q5AZT0 STRING:Q5AZT0
EnsemblFungi:CADANIAT00006808 GeneID:2870788 KEGG:ani:AN6200.2
Uniprot:Q5AZT0
Length = 1287
Score = 570 (205.7 bits), Expect = 2.5e-52, Sum P(4) = 2.5e-52
Identities = 199/809 (24%), Positives = 370/809 (45%)
Query: 325 INREICSTKLPIVFNALKDILASEHEEAIFAATEALKNLINACIDESLIKQGVDQITNVN 384
I+ E KLP +FN + LAS +A+E L + + CI S+I + +V
Sbjct: 324 ISPEDTFEKLPELFNMISSYLASPSSNIRVSASECLVSFVANCIPASVIIE-----PSVY 378
Query: 385 SDARKSGPTVIEKICATVESLLDYHYSAVWDMAFQIVSTMFDKLGTYSSYFMRGALKNLA 444
+ +EK+ + + LL Y A W F + + MF+ SS F+ +K +
Sbjct: 379 DEK------TLEKLAKSTKDLLSVKYQAAWMEVFNVCAAMFESFKWQSSPFLDDIVKTVG 432
Query: 445 DMQNLPDEDFPYRKQLHECVGSAVGSMGPETFLCLLPLKLEASDLSEVN-VWLFPILKQY 503
++++ +E F +K+ +G+A+ +MGPE L +LPL L + VW PIL+
Sbjct: 433 ELRS--NEAFQGKKEADNVLGAAIEAMGPEAVLNILPLNLIEQKAGQPGRVWFLPILRDS 490
Query: 504 IIGARLNFFMEKLLGMAKLIGQKSQKFELEGRVFSSRSADALVYSLWSLLPSFCNYPVDT 563
+ L+ F + + +++ + Q+ ++ + + + LV W++LP +C P+D
Sbjct: 491 VTNTNLSHFRSEFVPLSEALYQRVMEYASAEKTVEVKIFETLVQQTWAILPGYCELPLDL 550
Query: 564 AESF-MDLAGVLCSALHEENDIRGIICSSLQNLIQQNKKTLEGKNDLSNVVISTASQRAM 622
ESF A +L + L+++ D+R IC +LQNL++ N+ L +N+ ++++ QR +
Sbjct: 551 IESFDQSFAELLSNILYKQTDLRVDICKALQNLVESNQAILSVENEKDDLIL----QRRI 606
Query: 623 AHYTTKVATDNLNVLKSSARELLSILSRIFLESAKDEGGCLQSTIGDFASIADKEIVTRL 682
T + A N+ L A LL++L ++ ++ G + I + SI ++ +
Sbjct: 607 ---TKEAAKKNIAHLAGFASNLLAVLFNVYSQTLPHYRGYILQCINAYLSITPEKELNDT 663
Query: 683 FKRTMHRL---LEATQEAGK--TKSTRKSNSMQ------ID--DSSNESSPDFMRARLFD 729
F+R L + + QEA K + T + M ID + + P A LF
Sbjct: 664 FERVTQMLESSVTSEQEAAKQGNQPTNSGDKMPPTSHTLIDLVIAMSIYLPRSSFAALFS 723
Query: 730 LALSLLPGLNAKEIDVLFVAIK--PALQDDE---GLIQKKAYKVLSTILRKCDGF-LSSR 783
LA ++L G A + ++ A K P L E ++++ ++ IL D S+R
Sbjct: 724 LAAAILNGGTADQ-QLIKKAYKLIPRLATTETGAAALRERNAELQGLILATADKTPASAR 782
Query: 784 LEELLGL--MIEVLPSCHFSAKRHRLDCLYFIIAHVSKDDSEQRRSYILSSFLTEIILAL 841
+ +L + ++ LP+ H + + + K+ +E+ R+ +SF I LA
Sbjct: 783 RDRMLAIHELVSHLPTSDL----HFIPSILSEVVLGCKESNEKART---ASFDLLIQLAK 835
Query: 842 KEANKRTRNRAYDVLVQIGRAFGDEENGGGKENLYQFFNMVAGGLAGESPHMISAAVKGL 901
+ + + + D+ + +FF MV+ GLAG SPHM++A+V L
Sbjct: 836 RTIDHELNPPGTTIRNSLVPHMPDDAPDA-PATIEEFFTMVSAGLAGSSPHMVAASVTAL 894
Query: 902 ARLAYEF-SDLVSNV-YKLLPSTFLLLQRKNREIIKANLGLLKVLVAKSHAEGLQIHLAS 959
+RL ++F D+ S + L+ + L L NREI+++ LG +KV V + L+ L +
Sbjct: 895 SRLFFDFHKDIQSAIRLDLVQTVELFLTSNNREIVRSVLGFVKVAVVVLSDDELRPRLNT 954
Query: 960 MVEGLLKWQDDTKNQFKSKIKLLLEMLVKKCGLDAVKAVMPEEH----MXXXXXXXXXXX 1015
+V L+ W + K + KSK+K +L+ L+++ G ++ ++ E +
Sbjct: 955 LVPNLMVWSKEHKGRLKSKVKGILDRLIRRFGAAPLEELVGEADRKLVVNIRKLRERRKK 1014
Query: 1016 XXXXXXATKTEDTKSHFSKTTTSRLSR-----WNHTKIFSDFGDEGSEGSDAEYMDVGT- 1069
A ED + T + ++ ++ SDF D + S+ + GT
Sbjct: 1015 KKKEGEADDDEDDDDGHNPGTADKNAKSFGNAFDKAVYDSDFSDSDDDASEISVDEEGTT 1074
Query: 1070 -VSGQGSKASPQLKSKVSTLRLKKKRKAD 1097
V +G + + K K S +++ D
Sbjct: 1075 HVQSKGGRKAQGRKGKQSEQYIRELSPED 1103
Score = 59 (25.8 bits), Expect = 2.5e-52, Sum P(4) = 2.5e-52
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 33 QEEHQHLCAAIGAMSQELKDQNLPLTPISYFGA 65
Q +H H + A+ L+DQ +P +YF A
Sbjct: 17 QNQH-HTAVVLNAVEDTLRDQKADFSPTAYFAA 48
Score = 50 (22.7 bits), Expect = 2.5e-52, Sum P(4) = 2.5e-52
Identities = 17/74 (22%), Positives = 30/74 (40%)
Query: 1118 RQKTRSALRSSEHLKQKTESDDEPEIDSEGRLIIHEGRKPKKVKPSNPDLDGRSEAGSMM 1177
R+ R ++ ++ K+K++ DDE ++D + R+ G S GS
Sbjct: 1186 RRGQRGKIKMAQAQKKKSQRDDEMDVDDGNENSANTNRQSSSQAGRGGPGRGSSRGGS-- 1243
Query: 1178 SRPSSRKTQKRRKT 1191
P R+ KT
Sbjct: 1244 -NPPGRRGLGMPKT 1256
Score = 42 (19.8 bits), Expect = 2.5e-52, Sum P(4) = 2.5e-52
Identities = 11/57 (19%), Positives = 28/57 (49%)
Query: 302 ETSADAMTFTARLLNVGMIKIY-----SINREICSTKLPIVFNALKDILASEHEEAI 353
E +A T + +G +++ S+ E S+KLP + A+ ++ ++++ +
Sbjct: 250 ELLMNASRSTNEYITMGAFEVFEVIFSSMANEFTSSKLPRLLEAISELKPAQNDSQL 306
>POMBASE|SPAPB8E5.07c [details] [associations]
symbol:rrp12 "rRNA processing protein Rrp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030490
"maturation of SSU-rRNA" evidence=ISO] [GO:0044732 "mitotic spindle
pole body" evidence=IDA] InterPro:IPR016024 PomBase:SPAPB8E5.07c
GO:GO:0005634 GO:GO:0005737 GO:GO:0043234 EMBL:CU329670
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0044732
GO:GO:0030490 eggNOG:NOG149372 KO:K14794 InterPro:IPR012978
Pfam:PF08161 RefSeq:NP_594781.1 ProteinModelPortal:Q9C0X8
STRING:Q9C0X8 EnsemblFungi:SPAPB8E5.07c.1 GeneID:2543238
KEGG:spo:SPAPB8E5.07c OMA:THMISAT OrthoDB:EOG4WQ49N
NextBio:20804260 Uniprot:Q9C0X8
Length = 1163
Score = 318 (117.0 bits), Expect = 1.1e-48, Sum P(4) = 1.1e-48
Identities = 89/318 (27%), Positives = 159/318 (50%)
Query: 386 DARKSGPTVIEKICATV-ESLLDYHYSAVWDMAFQIVSTMFDKLGTYSSYFMRGALKNLA 444
D + V+E+IC+ + ++L D + + FQI+S++ DKLG +S ++ AL+ +
Sbjct: 354 DTTPNSFAVVEEICSFICDALRDIRFRLAYPECFQIISSLCDKLGPHSDPYLIPALEVID 413
Query: 445 DMQNLPDEDFPYRKQLHECVGSAVGSMGPETFLCLLPLKLEASDLSEVN-VWLFPILKQY 503
++ E F + + E +GS V ++GPE L +LPL LE +D V WL P+L+
Sbjct: 414 YLRG--SEGFDGKALVDEAIGSFVRAIGPEAMLRVLPLNLELNDKDAVGRAWLLPVLRDN 471
Query: 504 IIGARLNFFMEKLLGMAKLIGQKSQKF-ELEGRVFSSRSADALVYSLWSLLPSFCNYPVD 562
I A L F + ++ + QK + +L+ S+ LV +WSLLP +C P+D
Sbjct: 472 IRFANLAHFTNYFVPLSGQLYQKVIEMNDLDS--IPSKLLQTLVDQIWSLLPGYCYLPLD 529
Query: 563 TAESF-MDLAGVLCSALHEENDIRGIICSSLQNLIQQNKKTLEGKNDLSNVVISTASQRA 621
SF ++ A +L + L+E+ +R +IC+SL L++ N K + K L +V+ S
Sbjct: 530 LQSSFTLEFASILVNVLYEQVSLRSVICNSLTALVETNSKVAD-KLPLDDVISVPVS--- 585
Query: 622 MAHYTTKVATDNLNVLKSSARELLSILSRIFLESAKDEGGCLQSTIGDFASIADKEIVTR 681
A+ NL L + + LS+L +F + + I + I+ + +
Sbjct: 586 -----ASDASSNLAFLTNMSSNFLSVLLNVFSSTPSQYRYPILKCIQTWIFISSNDTIHS 640
Query: 682 LFKRTMHRLLEATQE-AG 698
++K+ L ++ + AG
Sbjct: 641 VYKKVTDLLPDSLNDLAG 658
Score = 308 (113.5 bits), Expect = 1.1e-48, Sum P(4) = 1.1e-48
Identities = 123/521 (23%), Positives = 217/521 (41%)
Query: 630 ATDNLNVLKSSARELLSILSRIFLESAKDEGGCLQSTIGDFASIADKEIVTRLFKRTMHR 689
A+ NL L + + LS+L +F + + I + I+ + + ++K+
Sbjct: 589 ASSNLAFLTNMSSNFLSVLLNVFSSTPSQYRYPILKCIQTWIFISSNDTIHSVYKKVTDL 648
Query: 690 LLEATQEAGKTKSTRKSNSMQIDDSSNESSPDFMRARLFDLALSLLPGLNAKEIDVLFVA 749
L ++ + + S I + SSP M L DL + + P LN LF
Sbjct: 649 LPDSLNDL--------AGSFNIA-ADGISSP--MAYSLIDLLIVISPYLNQDYAVTLFEY 697
Query: 750 IKPALQDDEGLIQKKAYKVLSTILRKCDG--FLSSRLEELLGLMIEVLPSCHFSAKRHRL 807
+ L+ IQKK YK+L T+LR G + + ++E+ + V S ++ RL
Sbjct: 698 VHEFLRHVNPAIQKKGYKLLGTLLRVDYGKAYATQHVKEIFEELSSVADRVVSSTRKDRL 757
Query: 808 DCLYFIIAHVSKDDSEQRRSYILSSFLTEIILALKEANKRTRNRAYDVLVQIGR-AFGDE 866
L A SE + L E I++LKE N++ R+ A+ +L I + A
Sbjct: 758 ASLN---ALYELQSSEL--VIAIPQLLPEAIISLKEVNEKARHTAFQLLFNIAKSAVNSV 812
Query: 867 ENGGGK-ENLYQFFNMVAGGLAGESPHMISAAVKGLARLAYEFSDLVSNVY--KLLPSTF 923
E G K E + +F ++++ GLAG S HMISA + ++ + E+ +S + +L+ +
Sbjct: 813 EFGNSKPERVEKFVSVISAGLAGSSTHMISATIIAISSIVMEYKVFISEPFLVQLISTLN 872
Query: 924 LLLQRKNREIIKANLGLLKVLVAKSHAEGLQIHLASMVEGLLKWQDDTKNQFKSKIKLLL 983
L + REI KA + +K+ V+ E ++ L ++ LL W + K + K++ L
Sbjct: 873 LFITSSKREIAKAAIDFIKISVSSFPVECIKPLLPELIPNLLAWSHEGKANLRVKVRHLF 932
Query: 984 EMLVKKCGLDAVKAVMPEEHMXXXXXXXXXXXXXXXXXATKTEDTKSHFSKTTTSRLSRW 1043
E + +K G+ ++ P E A K + K ++ + S +
Sbjct: 933 EKMGRKYGIAEIEPFFPAEDKKLITNIRKTQERNIRKRAMKRDPAKPSSAQPRKTFASAY 992
Query: 1044 NHTKIFSDFGDEGSEGSDAEYMDVGTVSG-QGSKASPQLKSKVSTLRLKKKRKADKIXXX 1102
++ D DE E + + M+ G + +A Q + L L KI
Sbjct: 993 E-AAVY-DTDDEAEEEFENDEMNNGNGGDLRMDEAFVQEDNDEEPLDLLDIEAVSKISST 1050
Query: 1103 XXXXXXXXXXXXXXXRQKTRSALRSSEHLKQKTESDDEPEI 1143
+QK SA +S+E + DE E+
Sbjct: 1051 DPRKKLAAR------KQKLNSAFKSNEEGRLLINDSDEDEL 1085
Score = 38 (18.4 bits), Expect = 1.1e-48, Sum P(4) = 1.1e-48
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 43 IGAMSQELKDQNLPLTPISYFGA 65
+ A+ LK+Q TP +Y A
Sbjct: 31 VSAVEGTLKEQKTEATPTAYLVA 53
Score = 38 (18.4 bits), Expect = 1.1e-48, Sum P(4) = 1.1e-48
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 1132 KQKTESDDEPEIDSEGRLIIHEGRKPKKVKPSNPDLDGRSEAGSMMSRPSSRKTQKRR 1189
KQK S + + EGRL+I++ + + ++ S + +E + K RR
Sbjct: 1060 KQKLNSAFKS--NEEGRLLINDSDEDELIEDSLANAQQHAEVNRTYLEAVAGKESFRR 1115
>FB|FBgn0030504 [details] [associations]
symbol:CG2691 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR016024 GO:GO:0005634
SUPFAM:SSF48371 EMBL:AE014298 eggNOG:NOG149372 KO:K14794
InterPro:IPR012978 Pfam:PF08161 EMBL:AY051753 RefSeq:NP_572906.2
UniGene:Dm.159 ProteinModelPortal:Q9VYA7 SMR:Q9VYA7
MINT:MINT-804811 STRING:Q9VYA7 PaxDb:Q9VYA7
EnsemblMetazoa:FBtr0073848 GeneID:32320 KEGG:dme:Dmel_CG2691
UCSC:CG2691-RA FlyBase:FBgn0030504 GeneTree:ENSGT00390000013106
InParanoid:Q9VYA7 OMA:LLCVFFE OrthoDB:EOG4Z8WBD PhylomeDB:Q9VYA7
GenomeRNAi:32320 NextBio:777923 Bgee:Q9VYA7 Uniprot:Q9VYA7
Length = 1384
Score = 234 (87.4 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 102/468 (21%), Positives = 186/468 (39%)
Query: 148 NWSDVSQLYGVVLAFMTDSRLKVRRQSHLCVREILLSLQGTLVLAPASEAITNMFE---- 203
++S Q + +LAF S+ K+R+ + I L + G+ + PA ++ N +
Sbjct: 252 SYSSTFQYFDAILAFSIHSQPKIRKAAQ---HAIALIIHGSCFMLPAIKSDDNEMDEAVE 308
Query: 204 --KFLLLAGGSNTS----ADEKPK---GAQE-VLYVLDALKECLPLMSTKYTAVILKYFK 253
K S + A KP+ AQ VL+ L+ LK+ L T+ + ++
Sbjct: 309 QPKVKHHPASSRVAKFCLAQFKPEVLANAQTTVLHTLELLKDTLYGFKTEDIRSVCEHLL 368
Query: 254 TLLELRQPLVTRRVTDALNVICLHPTLEVXXXXXXXXXXXXXXXVSTNETSADAMTFTAR 313
+++ LV L + L + + + +
Sbjct: 369 SIMTAANVLVRTNCFQTLYSLFLKKSPNLNASLCAKLLAAIHEYRPDKSDIRQTIAWVT- 427
Query: 314 LLNVGMIKIYSINREICSTKLPIVFNALK-DILASEHEEAIFAATEALKNLINACIDESL 372
+L G + + ++ ++C LP + + D+ S+ +E + + +K L+ C+ +
Sbjct: 428 VLKEGHLHLATMQLDLCMQALPRLIDVCTTDLWLSDQKELVAGVSNCIKELLQDCVSRAC 487
Query: 373 IKQGVDQITNVNSDARKSGPTVIEKICATVESLLDYHYSAVWDMAFQIVSTMFDKLGTYS 432
D N R+S + +I A++ +L+ + + I S +F+ G
Sbjct: 488 AT-AEDAQCN-----RQS----VSRIIASLHKMLNAPFGEISRFVILIFSFVFEACGKLF 537
Query: 433 SYFMRGALKNLADMQNLPDEDFPYRKQLHECVGSAVGSMGPETFLCLLPLKLEASDLSEV 492
+ L + D +R Q+ V SA+ ++GPE L +PL +
Sbjct: 538 GSELTPPLMTICKRY---DTQSAHRLQIEHTVISAIKALGPELVLTAIPLADGKGVMQLE 594
Query: 493 NVWLFPILKQYIIGARLNFFMEKLLGMAKLIGQKSQKFELEGRVFSSRSADALVYSLWSL 552
WL P+L++ GA L FF EK++ +A K ++F SS + L LW L
Sbjct: 595 RSWLLPLLREGANGASLQFFKEKIVALAMDCQLKWKEFAEAKNNSSSHIYELLCCQLWGL 654
Query: 553 LPSFCNYPVDTAESFMDLAGVLCSALHEENDIRGIICSSLQNLIQQNK 600
P FC P D E LA L +A+ + + R I L L+ N+
Sbjct: 655 FPGFCRQPRDP-EYLRYLAPTLGAAVEKNPEFRPPIYDGLMELLGDNQ 701
Score = 132 (51.5 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 40/144 (27%), Positives = 66/144 (45%)
Query: 1131 LKQKTESDDEPEIDSEGRLI---IHEGRKPKKVKPSNPDLDGRSEAGSM-MSRP--SSRK 1184
+K+ E D E + +L+ + +G +K R AG + R +
Sbjct: 1242 VKRGMEDDSSDEDKLQQKLVPKRVRKGDDAMSMKSGKTTASSRYTAGGKGIHRQLTAGNS 1301
Query: 1185 TQKRRKTSESGWAYTGSEYASKKASGDVKRKGKLEPYAYWPMDRKLMSRRPEHRAAARKG 1244
K+ +S GSEY SKKA GD+K+ GKL+PYAY P+ R +++R R+ +
Sbjct: 1302 DAMSVKSGKSTSRPAGSEYGSKKAKGDMKKSGKLDPYAYIPLTRNNLNKRK--RSMNSRK 1359
Query: 1245 MASVVKLTKKLEGKSASSALSMKF 1268
SV++ G + +S K+
Sbjct: 1360 FKSVLRGAGAENGGAGGGRVSKKY 1383
Score = 97 (39.2 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 86/442 (19%), Positives = 165/442 (37%)
Query: 762 QKKAYKVLSTI----LRKCDGFLSSRLEELLGLMIEVL-PSCHFSAKRHRLDCLYFII-A 815
Q+K Y++L + L C F L ++++ SC+ + RL CL +I
Sbjct: 827 QRKTYELLRELMTSELPSCQKFTRKNSIVLQQILLDSFNTSCNV-CQASRLHCLKSLIDC 885
Query: 816 HVSKDDSEQRRSYILSSFLTEIILALKEANKRTRNRAYDVLVQIGRAFGDEENGGGKENL 875
H + ++Q ++ + E +L KE + A ++ I + + D GK N
Sbjct: 886 HSNLAYNDQ----LVMKAIPEAVLNYKEFSNYKEQVAEQLIKSITQLYHD----AGKIN- 936
Query: 876 YQFFNMVAGGLAGESPHMISAAVKGLARLAYEFSDL-VSNVYKLLPSTFLLLQRKNREII 934
F +++ G AG+ + + + A L + L V+ + +L + L +K+R+
Sbjct: 937 -DFVDILTAGFAGDEMLVTNTILAFRAVLQQQGEHLTVATLEFVLQQVSVFLVQKSRKQA 995
Query: 935 KANLGLLKVLVAKSHAEGLQIHLASMVEGLLKWQDDTKNQFKSKIKLLLEMLVKKCGLDA 994
+A + L + + HL +++ L DTK + +I LL+ L +
Sbjct: 996 EAAIAFLITFIKVMPIPLVANHLEAIMRSLSAMTKDTKRYCRIQIGYLLKKLCIRFSPGE 1055
Query: 995 VKAVMP--EEHMXXXXXXXXXXXXXXXXXATKTEDTKSHFSKTTTSRLSRWNHTKIFSDF 1052
+ +P ++ + E + S L ++T I
Sbjct: 1056 LAGFVPGDDDVIHRRLKMIRKRTRRDLRKKQNLEAQEDSSDDELVSGLQEKSYT-IDDML 1114
Query: 1053 GDEGSE-GSDAEYMDVGTVSGQGSKASPQLKSKVSTLRLKKKRKADKIXXXXXXXXXXXX 1111
D S+ D + D + SK S K + ST + D+I
Sbjct: 1115 ADSDSDLPEDMDAKDEAGAAAAASKRSKNAKQQKSTYI---REDPDEIVDLADLKSIGNV 1171
Query: 1112 XXXXXXRQKTRSALRSSEHLKQKTESDDEPEIDSEGRLIIHEGRKPKKVKPSNPDLDGRS 1171
+ T + S+ K + + D +GRLII + K + + N D S
Sbjct: 1172 LTSGSAQTATPA---QSQKTKAQLPNGGFKTAD-DGRLIISD--KALRGQGGNDQSDDDS 1225
Query: 1172 EAGSMMSRPSSRKTQKRRKTSE 1193
++ + M+ + K K ++ E
Sbjct: 1226 DSDASMAYGTVAKQPKVKRGME 1247
>WB|WBGene00021595 [details] [associations]
symbol:Y46E12BL.2 species:6239 "Caenorhabditis elegans"
[GO:0016773 "phosphotransferase activity, alcohol group as
acceptor" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR016024
GO:GO:0009792 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:NOG149372 KO:K14794 InterPro:IPR012978 Pfam:PF08161
GeneTree:ENSGT00390000013106 OMA:LLCVFFE EMBL:FO080087
RefSeq:NP_497319.1 ProteinModelPortal:Q965N8 SMR:Q965N8
MINT:MINT-3386925 PaxDb:Q965N8 EnsemblMetazoa:Y46E12BL.2
GeneID:266878 KEGG:cel:CELE_Y46E12BL.2 UCSC:Y46E12BL.2 CTD:266878
WormBase:Y46E12BL.2 HOGENOM:HOG000021886 InParanoid:Q965N8
NextBio:953338 Uniprot:Q965N8
Length = 1334
Score = 164 (62.8 bits), Expect = 7.3e-13, Sum P(3) = 7.3e-13
Identities = 51/194 (26%), Positives = 96/194 (49%)
Query: 411 SAVWDMAFQIVSTMFDKLGTYSSYFMRGA--LKNLADMQNLPDEDFPYRK-QLHECVGSA 467
++VW + +++ G ++GA K + D+ L D + K +L +G+A
Sbjct: 470 ASVWKFILRAQMKLYETCGEG----LQGAELTKVMEDLARLRQSDDCFCKTELDFTIGAA 525
Query: 468 VGSMGPETFLCLLPLKLE--ASDLSE--VNVWLFPILKQYIIGARLNFFMEKLLGMAKLI 523
V +G + +L L+++ A+ LS WL P+L+ I A ++ F+ L +A I
Sbjct: 526 VRHIGVAHVMNILSLEVDPDAAILSTDFTRSWLLPVLRVNIHNAPISLFISHFLPIAMKI 585
Query: 524 GQKSQKFELEGRVFSSRSADALVYSLWSLLPSFCNYPVDTAESFMDLAGVLCSALHEEND 583
++ + +V R + LW LLPSFC P D +F D+A +L +AL+E D
Sbjct: 586 HRRLPTLQAP-QV--QRLYSTFQFQLWELLPSFCESPSDLETAFPDIAPILGAALNERKD 642
Query: 584 IRGIICSSLQNLIQ 597
+R + ++++ ++
Sbjct: 643 LRMTVLNAIRRALR 656
Score = 79 (32.9 bits), Expect = 7.3e-13, Sum P(3) = 7.3e-13
Identities = 68/332 (20%), Positives = 117/332 (35%)
Query: 932 EIIKANLGLLKVLVAKSHAEGLQIHLASMVEGLLKWQDDTKNQFKSKIKLLLEMLVKKCG 991
++ KAN LL+VLV K LQ + LK + + K K++ E ++
Sbjct: 1014 KVRKANRLLLEVLVEKFGVNVLQKYTEK--PDWLKQMKNIEKIRKRKVRKAGEAEMEHDD 1071
Query: 992 LDAVKAVMPEEHMXXXXXXXXXXXXXXXXXATKTEDTKSHFSKTTTSRL-SRWNHTKIFS 1050
D A+ A D++ K SR+ S W K S
Sbjct: 1072 EDGASAISGSNVSGRTAGADTILELLEDSDADNESDSEEQLMKK--SRVGSVW--LKNES 1127
Query: 1051 DFGDEGSEGSDAEYMDVGTVSGQGSKASPQLKSKVSTLRLKKKRKADKIXXXXXXXXXXX 1110
D GD + +D + Q + +P + K L++++K +
Sbjct: 1128 D-GDV-----PMDLLDSSRMMDQITTMNPAILEKRKKKALERRQKVEAGFQFSKDGKMIV 1181
Query: 1111 XXXXXXXRQKTRSALRSSEHLKQKTESDDEPEID--SEGRLIIHEGRKPK-KVKPSNPDL 1167
K + R DDE + D ++G+ + E + ++ + D
Sbjct: 1182 LGDDEEDEDKKQIGKRKMRSGYDGLGDDDEDDEDGPTKGKKRVKENSDSEDEILSDDDDD 1241
Query: 1168 DGRSEAGSMMSRPSSRKTQKRRKTSESGWAYTGSEYASKKASGDVKRKGK-----LEPYA 1222
D +A + +SR + K SG + GS +K+ K K ++PYA
Sbjct: 1242 DDEKDAKTFVSRAAPSYGGKGIYRDTSGKSQVGSSVGAKRQQKQKPNKPKQQQKSVQPYA 1301
Query: 1223 YWPMDRKLMSR--RPEHRAAARKGMASVVKLT 1252
Y P+ K + R +A + G K+T
Sbjct: 1302 YVPLRNKTAKQDVRQILKAKRKSGKGGGKKVT 1333
Score = 74 (31.1 bits), Expect = 7.3e-13, Sum P(3) = 7.3e-13
Identities = 29/146 (19%), Positives = 64/146 (43%)
Query: 716 NESSPDFMRARLFDLALSLLPGLNAKEIDVLFVAIKPALQD-DEGLIQKKAYKVLSTILR 774
+ES +AR+ D+ +L + + + I P D +QKKA+++L +++
Sbjct: 735 DESVASQKQARVLDILCALAKVAENENVSKILDTIMPWFNSSDTNGVQKKAFRILEEVIQ 794
Query: 775 K-----CDGFLSSRLEELLGLMIEVLPSCHFSAKRHRLDCLYFII--AHVSKDDSEQRRS 827
+ + L +R + + + + + S F A+ C++ + + K+ ++
Sbjct: 795 RRSHPEIEHLLDTRNDYVENALFKPIESISFPARASYCSCVHMLYDGCNTMKEVTD---- 850
Query: 828 YILSSFLTEIILAL-KEANKRTRNRA 852
+ + IIL L K+ N TR +
Sbjct: 851 -LTEKLIRNIILLLDKDNNVHTRQNS 875
>POMBASE|SPBC1105.01 [details] [associations]
symbol:SPBC1105.01 "rRNA processing protein Rrp12-like
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0030490 "maturation of SSU-rRNA"
evidence=ISO] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR016024 PomBase:SPBC1105.01 GO:GO:0005634 GO:GO:0043234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:CU329671
GO:GO:0030490 eggNOG:NOG149372 PIR:T39278 RefSeq:NP_596456.2
EnsemblFungi:SPBC1105.01.1 GeneID:3361337 KEGG:spo:SPBC1105.01
OrthoDB:EOG4B2X77 NextBio:20811405 Uniprot:Q9Y824
Length = 1001
Score = 167 (63.8 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 47/190 (24%), Positives = 93/190 (48%)
Query: 828 YILSSFLTEIILALKEANKRTRNRAYDVLVQIGRAF------------GDEENGGGKE-N 874
++L S + E++L K + R A+++LV++G G+E N E N
Sbjct: 730 HLLPSAIAEVVLFSKHHDDDLRAMAFELLVEVGNRMKNGGKINMSLIDGEEPNKTVVEAN 789
Query: 875 LYQFFNMVAGGLAGESPHMISAAVKGLARLAYEFSDLVSNVY--KLLPSTFLLLQRKNRE 932
+ ++ +M++ L +S ++ + + L R+ YEFSD + + Y +L LQ N+E
Sbjct: 790 INEYISMISANLMNDSLNLKVSTIFALTRIFYEFSDYIDDDYVNAVLEEVQSSLQSNNQE 849
Query: 933 IIKANLGLLKVLVAKSHAEGLQIHLASMVEGLLKWQDDTKNQFKSKIKLLLEMLVKKCGL 992
I +A +G +K+ + + HL +++ +L+W + K K K LL+ +++ L
Sbjct: 850 IARAAVGFIKMYITSFTKSKVLFHLDTLLPLILRWIKEHNAYVKLKAKQLLDRMLRVFSL 909
Query: 993 DAVKAVMPEE 1002
++A E
Sbjct: 910 KELEAFAENE 919
Score = 49 (22.3 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 586 GIICSSLQNLIQQNKKTLEGKNDLS-NVVISTASQR 620
GIIC++L ++ N T E ++S +++ S+R
Sbjct: 224 GIICNALSRILTSNIPTSEPIFEMSIKLILKVLSER 259
Score = 49 (22.3 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 22/83 (26%), Positives = 38/83 (45%)
Query: 738 LNAKEIDVLFVAIKPALQDDEGLIQKKAYKVLSTILRKCDGFLS----SRLEELLGLMIE 793
L K +DV+ + D ++K + +VL T+ +K DG L + +EL + E
Sbjct: 131 LYLKAVDVVMPLLVKFSVDLRPKVRKISIQVLQTLKQKYDGLLPHLYPAIFDELQRSLSE 190
Query: 794 V--LPSCHFSAKRHRLDCLYFII 814
V + + FS H L L ++
Sbjct: 191 VSNMDNPSFSKGLHTLHLLECLV 213
Score = 40 (19.1 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 299 STNETS-ADAMTFTARLLNVGMIK-IYSINREICSTKLPIVFNALKDILASE--HEEAIF 354
S +E S D +F+ L + +++ + IN + + L I+ NAL IL S E IF
Sbjct: 187 SLSEVSNMDNPSFSKGLHTLHLLECLVDIN-QASGSDLGIICNALSRILTSNIPTSEPIF 245
Score = 40 (19.1 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 21/82 (25%), Positives = 38/82 (46%)
Query: 546 VYSLWSLLPSFCNYPVDTAESFMDLAGVLCS-ALHEENDIRGIICSSLQNLIQQNKKTLE 604
+ +L + FC P+ ++ES ++ G S L+ +R N ++N T+
Sbjct: 305 IQTLLEKILDFCISPLQSSESDVEYDGATSSDILNSLKFLRNKFTMKFVN--KKNWATVL 362
Query: 605 GKNDLSNVVIS-TASQRAMAHY 625
N + V+ + TAS R A+Y
Sbjct: 363 S-NGIKKVIKTITASSRH-ANY 382
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1276 1156 0.00093 123 3 11 22 0.40 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 624 (66 KB)
Total size of DFA: 454 KB (2216 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 98.69u 0.11s 98.80t Elapsed: 00:00:07
Total cpu time: 98.70u 0.11s 98.81t Elapsed: 00:00:07
Start: Sat May 11 02:03:06 2013 End: Sat May 11 02:03:13 2013