BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039452
(164 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
+N+LLD+ A + DFG+AKL+ +D + TIG++AP EY G+ S DV+
Sbjct: 171 ANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGTIGHIAP-EYLSTGKSSEKTDVFG 228
Query: 62 FGIMLMEAFTRKKPTDEMF---SGEMTLKRWINDLLSVSVME-VVDANLLTREDRHFAAK 117
+G+ML+E T ++ D ++ L W+ LL +E +VD +L K
Sbjct: 229 YGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL------QGNYK 282
Query: 118 QQCVSFVFNLAMECTIESPERRINAKEIVTEL 149
+ V + +A+ CT SP R E+V L
Sbjct: 283 DEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LLD+N V ++DFGI+K DQ+ T+GY+ P EY +GR++ DVYSF
Sbjct: 169 NILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDP-EYFIKGRLTEKSDVYSF 227
Query: 63 GIMLMEAFTRKKPTDEMFSGEMT-LKRWINDLLSVSVME-VVDANLLTREDRHFAAKQQC 120
G++L E + + EM L W + + +E +VD NL + + +
Sbjct: 228 GVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK------IRPES 281
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTEL 149
+ + A++C S E R + +++ +L
Sbjct: 282 LRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
+N+LLD+ A + DFG+AKL+ +D + IG++AP EY G+ S DV+
Sbjct: 163 ANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGXIGHIAP-EYLSTGKSSEKTDVFG 220
Query: 62 FGIMLMEAFTRKKPTDEMF---SGEMTLKRWINDLLSVSVME-VVDANLLTREDRHFAAK 117
+G+ML+E T ++ D ++ L W+ LL +E +VD +L K
Sbjct: 221 YGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL------QGNYK 274
Query: 118 QQCVSFVFNLAMECTIESPERRINAKEIVTEL 149
+ V + +A+ CT SP R E+V L
Sbjct: 275 DEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LLD+N V ++DFGI+K Q+ T+GY+ P EY +GR++ DVYSF
Sbjct: 169 NILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDP-EYFIKGRLTEKSDVYSF 227
Query: 63 GIMLMEAFTRKKPTDEMFSGEMT-LKRWINDLLSVSVME-VVDANLLTREDRHFAAKQQC 120
G++L E + + EM L W + + +E +VD NL + + +
Sbjct: 228 GVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK------IRPES 281
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTEL 149
+ + A++C S E R + +++ +L
Sbjct: 282 LRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
+N+LLD+ A +SDFG+A+ Q++ ++ + T YMAP G ++ D+YS
Sbjct: 162 ANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAP--EALRGEITPKSDIYS 219
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTL 86
FG++L+E T DE ++ L
Sbjct: 220 FGVVLLEIITGLPAVDEHREPQLLL 244
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 20/147 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ D + +SD G+ + + D +L I +MAP E G+ S + D++S+
Sbjct: 158 NVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP-EAIMYGKFSIDSDIWSY 216
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E F+ + S +VV+ + R + C +
Sbjct: 217 GVVLWEVFSYG----------------LQPYCGYSNQDVVE---MIRNRQVLPCPDDCPA 257
Query: 123 FVFNLAMECTIESPERRINAKEIVTEL 149
+V+ L +EC E P RR K+I + L
Sbjct: 258 WVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 20/147 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ D + +SD G+ + + D +L I +MAP E G+ S + D++S+
Sbjct: 175 NVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP-EAIMYGKFSIDSDIWSY 233
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E F+ + S +VV+ + R + C +
Sbjct: 234 GVVLWEVFSYG----------------LQPYCGYSNQDVVE---MIRNRQVLPCPDDCPA 274
Query: 123 FVFNLAMECTIESPERRINAKEIVTEL 149
+V+ L +EC E P RR K+I + L
Sbjct: 275 WVYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
+N+LLD+ A +SDFG+A+ Q++ + + T YMAP G ++ D+YS
Sbjct: 162 ANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAP--EALRGEITPKSDIYS 219
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTL 86
FG++L+E T DE ++ L
Sbjct: 220 FGVVLLEIITGLPAVDEHREPQLLL 244
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 23/153 (15%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+D ++ +SDFG+ + ++ +DQ ++ T + + AP E + S+ DV++F
Sbjct: 134 NCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAP-EVFHYFKYSSKSDVWAF 191
Query: 63 GIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
GI++ E F+ K P D + E+ LK V + L R H A+
Sbjct: 192 GILMWEVFSLGKMPYDLYTNSEVVLK-------------VSQGHRLYRP--HLASDT--- 233
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRD 154
++ + C E PE+R +++++ + +R+
Sbjct: 234 --IYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 20/150 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ N++ + DFG+++ + D T+ I +M P E + +T DV+SF
Sbjct: 163 NCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP-ESIMYRKFTTESDVWSF 221
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E FT K + W L + V+E + + R C
Sbjct: 222 GVILWEIFTYGK------------QPWFQ-LSNTEVIECITQGRVLERPR------VCPK 262
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
V+++ + C P++R+N KEI L +
Sbjct: 263 EVYDVMLGCWQREPQQRLNIKEIYKILHAL 292
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
+N+LLD+ A +SDFG+A+ Q + + + T YMAP G ++ D+YS
Sbjct: 156 ANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAP--EALRGEITPKSDIYS 213
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTL 86
FG++L+E T DE ++ L
Sbjct: 214 FGVVLLEIITGLPAVDEHREPQLLL 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
+N+LLD+ A +SDFG+A+ Q + ++ + T Y AP G ++ D+YS
Sbjct: 153 ANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP--EALRGEITPKSDIYS 210
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTL 86
FG++L+E T DE ++ L
Sbjct: 211 FGVVLLEIITGLPAVDEHREPQLLL 235
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 140 ANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 196
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 197 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 235
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 236 ECPESLHDLMCQCWRKEPEER 256
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 133 ANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 189
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 190 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 228
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 229 ECPESLHDLMCQCWRKEPEER 249
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 140 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 196
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 197 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 235
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 236 ECPESLHDLMCQCWRKEPEER 256
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 136 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 192
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 193 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 231
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 232 ECPESLHDLMCQCWRKEPEER 252
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 134 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 190
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 191 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 229
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 230 ECPESLHDLMCQCWRKDPEER 250
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQT-QTLATIGYMAPVEYGREGRVSTNGDV 59
P N+L+D N + DFGIAK L + S+TQT L T+ Y +P E + D+
Sbjct: 139 PQNILIDSNKTLKIFDFGIAKAL--SETSLTQTNHVLGTVQYFSP-EQAKGEATDECTDI 195
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDL 93
YS GI+L E + P F+GE + I +
Sbjct: 196 YSIGIVLYEMLVGEPP----FNGETAVSIAIKHI 225
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 132 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 188
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 189 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 227
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 228 ECPESLHDLMCQCWRKDPEER 248
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 199
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 200 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 238
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 239 ECPESLHDLMCQCWRKDPEER 259
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 392 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 448
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 449 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 487
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 488 ECPESLHDLMCQCWRKEPEER 508
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 309 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 365
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 366 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 404
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 405 ECPESLHDLMCQCWRKEPEER 425
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 309 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 365
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 366 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 404
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 405 ECPESLHDLMCQCWRKEPEER 425
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 309 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 365
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 366 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 404
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 405 ECPESLHDLMCQCWRKEPEER 425
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 27/141 (19%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ +N+V ++DFG+ +L+ ED T Q I + AP E GR + DV+
Sbjct: 310 ANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 366
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF--AAKQ 118
SFGI+L E T+ + V +V+ +L + +R +
Sbjct: 367 SFGILLTELTTKGR---------------------VPYPGMVNREVLDQVERGYRMPCPP 405
Query: 119 QCVSFVFNLAMECTIESPERR 139
+C + +L +C + PE R
Sbjct: 406 ECPESLHDLMCQCWRKDPEER 426
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N++ + DFG+++ + D T+ I +M P E + +T DV+S
Sbjct: 158 NCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP-ESIMYRKFTTESDVWSL 216
Query: 63 GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G++L E FT K+P ++ + E V+E + + + R C
Sbjct: 217 GVVLWEIFTYGKQPWYQLSNNE--------------VIECITQGRVLQRPR------TCP 256
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ L + C P R N K I T L +
Sbjct: 257 QEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N ++ ++ + DFG+ + + D + L + +M+P E ++G +T DV+SF
Sbjct: 162 NCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 220
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T + + S E L+ V++ LL + D C
Sbjct: 221 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 261
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
+F L C +P+ R + EI++ + + + FR V
Sbjct: 262 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 299
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ + ++ ++DFG+A+L+ ED T Q I + AP E GR + DV+
Sbjct: 134 ANILVGNGLICKIADFGLARLI--EDNEXTARQGAKFPIKWTAP-EAALYGRFTIKSDVW 190
Query: 61 SFGIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
SFGI+L E T+ + P M + E V+E V+ Q
Sbjct: 191 SFGILLTELVTKGRVPYPGMNNRE--------------VLEQVERGY------RMPCPQD 230
Query: 120 CVSFVFNLAMECTIESPERR 139
C + L + C + PE R
Sbjct: 231 CPISLHELMIHCWKKDPEER 250
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++ VA +SDFG+ K + S TQ + + AP E RE + ST DV+SF
Sbjct: 132 NVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP-EALREKKFSTKSDVWSF 185
Query: 63 GIMLMEAFT 71
GI+L E ++
Sbjct: 186 GILLWEIYS 194
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 31/156 (19%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVS-----TNG 57
N+L++ N+V +SDFG++++L + ++ T T G P+ + +S +
Sbjct: 177 NILVNSNLVCKVSDFGLSRVLEDDPEA-----TYTTSGGKIPIRWTAPEAISYRKFTSAS 231
Query: 58 DVYSFGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
DV+SFGI++ E T ++P E+ + E VM+ ++
Sbjct: 232 DVWSFGIVMWEVMTYGERPYWELSNHE--------------VMKAINDGF------RLPT 271
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C S ++ L M+C + RR +IV+ L K+
Sbjct: 272 PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N ++ ++ + DFG+ + + D + L + +M+P E ++G +T DV+SF
Sbjct: 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 226
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T + + S E L+ V++ LL + D C
Sbjct: 227 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 267
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
+F L C +P+ R + EI++ + + + FR V
Sbjct: 268 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 305
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N ++ ++ + DFG+ + + D + L + +M+P E ++G +T DV+SF
Sbjct: 162 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 220
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T + + S E L+ V++ LL + D C
Sbjct: 221 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 261
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
+F L C +P+ R + EI++ + + + FR V
Sbjct: 262 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 299
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N ++ ++ + DFG+ + + D + L + +M+P E ++G +T DV+SF
Sbjct: 158 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 216
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T + + S E L+ V++ LL + D C
Sbjct: 217 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 257
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
+F L C +P+ R + EI++ + + + FR V
Sbjct: 258 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 295
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N ++ ++ + DFG+ + + D + L + +M+P E ++G +T DV+SF
Sbjct: 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 226
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T + + S E L+ V++ LL + D C
Sbjct: 227 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 267
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
+F L C +P+ R + EI++ + + + FR V
Sbjct: 268 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 305
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++ VA +SDFG+ K + S TQ + + AP E RE + ST DV+SF
Sbjct: 319 NVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP-EALREKKFSTKSDVWSF 372
Query: 63 GIMLMEAFT 71
GI+L E ++
Sbjct: 373 GILLWEIYS 381
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N ++ ++ + DFG+ + + D + L + +M+P E ++G +T DV+SF
Sbjct: 159 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 217
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T + + S E L+ V++ LL + D C
Sbjct: 218 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 258
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
+F L C +P+ R + EI++ + + + FR V
Sbjct: 259 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 296
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N ++ ++ + DFG+ + + D + L + +M+P E ++G +T DV+SF
Sbjct: 155 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 213
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T + + S E L+ V++ LL + D C
Sbjct: 214 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 254
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
+F L C +P+ R + EI++ + + + FR V
Sbjct: 255 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 292
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N ++ ++ + DFG+ + + D + L + +M+P E ++G +T DV+SF
Sbjct: 161 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 219
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T + + S E L+ V++ LL + D C
Sbjct: 220 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 260
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
+F L C +P+ R + EI++ + + + FR V
Sbjct: 261 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 298
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N ++ ++ + DFG+ + + D + L + +M+P E ++G +T DV+SF
Sbjct: 161 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 219
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T + + S E L+ V++ LL + D C
Sbjct: 220 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 260
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
+F L C +P+ R + EI++ + + + FR V
Sbjct: 261 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 298
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++ VA +SDFG+ K + S TQ + + AP E RE + ST DV+SF
Sbjct: 147 NVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP-EALREKKFSTKSDVWSF 200
Query: 63 GIMLMEAFT 71
GI+L E ++
Sbjct: 201 GILLWEIYS 209
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
P+N+++ + DFGIA+ + S+TQT + T Y++P E R V DV
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDARSDV 202
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGE 83
YS G +L E T + P F+G+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
P+N+++ + DFGIA+ + S+TQT + T Y++P E R V DV
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDARSDV 202
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGE 83
YS G +L E T + P F+G+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
P+N+++ + DFGIA+ + S+TQT + T Y++P E R V DV
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDARSDV 202
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGE 83
YS G +L E T + P F+G+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
P+N+++ + DFGIA+ + S+TQT + T Y++P E R V DV
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDARSDV 202
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGE 83
YS G +L E T + P F+G+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N ++ ++ + DFG+ + + D + L + +M+P E ++G +T DV+SF
Sbjct: 190 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 248
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T + + S E L+ V++ LL + D C
Sbjct: 249 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 289
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
+F L C +P+ R + EI++ + + + FR V
Sbjct: 290 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 327
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N V +SDFG+ + ++ +DQ + T T + + +P E R S+ DV+SF
Sbjct: 133 NCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVFSFSRYSSKSDVWSF 190
Query: 63 GIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+++ E F+ K P + + E V+E + + R +
Sbjct: 191 GVLMWEVFSEGKIPYENRSNSE--------------VVEDISTGFRLYKPRLAS------ 230
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
+ V+ + C E PE R ++ +L++I +S
Sbjct: 231 THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N V +SDFG+ + ++ +DQ + T T + + +P E R S+ DV+SF
Sbjct: 136 NCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVFSFSRYSSKSDVWSF 193
Query: 63 GIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+++ E F+ K P + + E V+E + + R +
Sbjct: 194 GVLMWEVFSEGKIPYENRSNSE--------------VVEDISTGFRLYKPRLAS------ 233
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
+ V+ + C E PE R ++ +L++I +S
Sbjct: 234 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
P+N+++ + DFGIA+ + S+TQT + T Y++P E R V DV
Sbjct: 161 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDARSDV 219
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGE 83
YS G +L E T + P F+G+
Sbjct: 220 YSLGCVLYEVLTGEPP----FTGD 239
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N V +SDFG+ + ++ +DQ + T T + + +P E R S+ DV+SF
Sbjct: 131 NCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVFSFSRYSSKSDVWSF 188
Query: 63 GIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+++ E F+ K P + + E V+E + + R +
Sbjct: 189 GVLMWEVFSEGKIPYENRSNSE--------------VVEDISTGFRLYKPRLAS------ 228
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
+ V+ + C E PE R ++ +L++I +S
Sbjct: 229 THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N V +SDFG+ + ++ +DQ + T T + + +P E R S+ DV+SF
Sbjct: 134 NCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVFSFSRYSSKSDVWSF 191
Query: 63 GIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+++ E F+ K P + + E V+E + + R +
Sbjct: 192 GVLMWEVFSEGKIPYENRSNSE--------------VVEDISTGFRLYKPRLAS------ 231
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
+ V+ + C E PE R ++ +L++I +S
Sbjct: 232 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N V +SDFG+ + ++ +DQ + T T + + +P E R S+ DV+SF
Sbjct: 153 NCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVFSFSRYSSKSDVWSF 210
Query: 63 GIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+++ E F+ K P + + E V+E + + R +
Sbjct: 211 GVLMWEVFSEGKIPYENRSNSE--------------VVEDISTGFRLYKPRLAS------ 250
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
+ V+ + C E PE R ++ +L++I +S
Sbjct: 251 THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVLL A +SDFG++K L E+ QT + + AP E + S+ DV+S
Sbjct: 137 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 195
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMT 85
FG+++ EAF+ +KP M E+T
Sbjct: 196 FGVLMWEAFSYGQKPYRGMKGSEVT 220
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVLL A +SDFG++K L E+ QT + + AP E + S+ DV+S
Sbjct: 141 NVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 199
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMT 85
FG+++ EAF+ +KP M E+T
Sbjct: 200 FGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVLL A +SDFG++K L E+ QT + + AP E + S+ DV+S
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 215
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMT 85
FG+++ EAF+ +KP M E+T
Sbjct: 216 FGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVLL A +SDFG++K L E+ QT + + AP E + S+ DV+S
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 215
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMT 85
FG+++ EAF+ +KP M E+T
Sbjct: 216 FGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVLL A +SDFG++K L E+ QT + + AP E + S+ DV+S
Sbjct: 155 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 213
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMT 85
FG+++ EAF+ +KP M E+T
Sbjct: 214 FGVLMWEAFSYGQKPYRGMKGSEVT 238
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVLL A +SDFG++K L E+ QT + + AP E + S+ DV+S
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 205
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMT 85
FG+++ EAF+ +KP M E+T
Sbjct: 206 FGVLMWEAFSYGQKPYRGMKGSEVT 230
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVLL A +SDFG++K L E+ QT + + AP E + S+ DV+S
Sbjct: 141 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 199
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMT 85
FG+++ EAF+ +KP M E+T
Sbjct: 200 FGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVLL A +SDFG++K L E+ QT + + AP E + S+ DV+S
Sbjct: 135 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-ECINYYKFSSKSDVWS 193
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMT 85
FG+++ EAF+ +KP M E+T
Sbjct: 194 FGVLMWEAFSYGQKPYRGMKGSEVT 218
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N V +SDFG+ + ++ +DQ + T T + + +P E R S+ DV+SF
Sbjct: 133 NCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP-EVFSFSRYSSKSDVWSF 190
Query: 63 GIMLMEAFTRKK 74
G+++ E F+ K
Sbjct: 191 GVLMWEVFSEGK 202
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++ VA +SDFG+ K + S TQ + + AP E RE ST DV+SF
Sbjct: 138 NVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP-EALREAAFSTKSDVWSF 191
Query: 63 GIMLMEAFT 71
GI+L E ++
Sbjct: 192 GILLWEIYS 200
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPVEYGREGRVSTNGDV 59
P+N+L+ + DFGIA+ + S+ QT + T Y++P E R V DV
Sbjct: 144 PANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSP-EQARGDSVDARSDV 202
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGE 83
YS G +L E T + P F+G+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 162 NCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 220
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 221 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 261
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 262 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +V + DFG+++ + D +T+ I +M P E + +T DV+SF
Sbjct: 159 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP-ESILYRKFTTESDVWSF 217
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E FT K + W +S E +D + R + C
Sbjct: 218 GVVLWEIFTYGK------------QPWYQ----LSNTEAIDC---ITQGRELERPRACPP 258
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + C P++R + K++ L +
Sbjct: 259 EVYAIMRGCWQREPQQRHSIKDVHARLQAL 288
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
NVLL A +SDFG++K L E+ QT + + AP + Y + S+ DV
Sbjct: 499 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK---FSSKSDV 555
Query: 60 YSFGIMLMEAFTR-KKPTDEMFSGEMT 85
+SFG+++ EAF+ +KP M E+T
Sbjct: 556 WSFGVLMWEAFSYGQKPYRGMKGSEVT 582
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +V + DFG+++ + D +T+ I +M P E + +T DV+SF
Sbjct: 165 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP-ESILYRKFTTESDVWSF 223
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E FT K + W +S E +D + R + C
Sbjct: 224 GVVLWEIFTYGK------------QPWYQ----LSNTEAIDC---ITQGRELERPRACPP 264
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + C P++R + K++ L +
Sbjct: 265 EVYAIMRGCWQREPQQRHSIKDVHARLQAL 294
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +V + DFG+++ + D +T+ I +M P E + +T DV+SF
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP-ESILYRKFTTESDVWSF 246
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E FT K + W +S E +D + R + C
Sbjct: 247 GVVLWEIFTYGK------------QPWYQ----LSNTEAIDC---ITQGRELERPRACPP 287
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + C P++R + K++ L +
Sbjct: 288 EVYAIMRGCWQREPQQRHSIKDVHARLQAL 317
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 21/154 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVLL ++DFG+A LL +D+ + ++ I +MA +E G+ + DV+S+
Sbjct: 163 NVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA-LESIHFGKYTHQSDVWSY 221
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G+ + E T E ++G + + EV D LL + +R A Q C
Sbjct: 222 GVTVWELMTFGA---EPYAG-------------LRLAEVPD--LLEKGER-LAQPQICTI 262
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
V+ + ++C + R KE+ E +++ RD
Sbjct: 263 DVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 296
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIG-EDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
NVLL A +SDFG++K L E+ QT + + AP + Y + S+ DV
Sbjct: 500 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK---FSSKSDV 556
Query: 60 YSFGIMLMEAFTR-KKPTDEMFSGEMT 85
+SFG+++ EAF+ +KP M E+T
Sbjct: 557 WSFGVLMWEAFSYGQKPYRGMKGSEVT 583
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 182 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 240
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 241 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 281
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 282 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 181 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 239
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 240 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 280
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 281 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ ++ ++ +T A + +MA +E + + +T DV+
Sbjct: 164 NCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 222
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 223 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 263
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 264 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 221
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 222 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 263 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 221
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 222 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 263 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 155 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 213
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 214 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 254
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 255 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 216
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 217 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 257
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 258 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 162 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 220
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 221 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 261
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 262 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 161 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 219
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 220 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 260
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 261 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 218
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 219 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 259
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 260 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ L+DFG++K I D T+ YMAP R+G S + D +
Sbjct: 158 PENILLDEEGHIKLTDFGLSKEAI--DHEKKAYSFCGTVEYMAPEVVNRQGH-SHSADWW 214
Query: 61 SFGIMLMEAFTRKKP 75
S+G+++ E T P
Sbjct: 215 SYGVLMFEMLTGSLP 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 21/154 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVLL ++DFG+A LL +D+ + ++ I +MA +E G+ + DV+S+
Sbjct: 145 NVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA-LESIHFGKYTHQSDVWSY 203
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G+ + E T E ++G + + EV D LL + +R A Q C
Sbjct: 204 GVTVWELMTFGA---EPYAG-------------LRLAEVPD--LLEKGER-LAQPQICTI 244
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
V+ + ++C + R KE+ E +++ RD
Sbjct: 245 DVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG+A++L + ++ T+ I + +P + ++ DV+S
Sbjct: 177 NILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
+GI+L E + ++P EM + + V++ VD E C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
+ ++ L ++C + R ++IV+ I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
NVL+ +N V ++DFG+A+ + D T + +MAP RV T+ DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAP--EALFDRVYTHQSDVWS 244
Query: 62 FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
FG+++ E FT P +E+F L +E
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 65/160 (40%), Gaps = 28/160 (17%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYG-----REGRVSTNG 57
N +LD++ ++DFG+A+ ++ + Q A + PV++ + R +T
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL----PVKWTALESLQTYRFTTKS 209
Query: 58 DVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAK 117
DV+SFG++L E TR P R I+ D + R
Sbjct: 210 DVWSFGVLLWELLTRGAPP----------YRHIDPF---------DLTHFLAQGRRLPQP 250
Query: 118 QQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLF 157
+ C ++ + +C P R + +V E+ +I +L
Sbjct: 251 EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
NVL+ +N V ++DFG+A+ + D T + +MAP RV T+ DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF--DRVYTHQSDVWS 244
Query: 62 FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
FG+++ E FT P +E+F L +E
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N ++ ++ + DFG+ + + D + L + +M+P E ++G +T DV+SF
Sbjct: 153 NCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 211
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T + + S E L+ V++ LL + D C
Sbjct: 212 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 252
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
+ L C +P+ R + EI++ + + + FR V
Sbjct: 253 MLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 290
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
NVL+ +N V ++DFG+A+ + D T + +MAP RV T+ DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 244
Query: 62 FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
FG+++ E FT P +E+F L +E
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
NVL+ +N V ++DFG+A+ + D T + +MAP RV T+ DV+S
Sbjct: 187 NVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 244
Query: 62 FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
FG+++ E FT P +E+F L +E
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 221
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 222 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 263 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 161 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 219
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 220 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 260
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 261 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 168 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 226
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 227 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 267
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 268 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 164 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 222
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 223 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 263
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 264 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 221
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 222 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 262
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 263 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
NVL+ +N V ++DFG+A+ + D T + +MAP RV T+ DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 244
Query: 62 FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
FG+++ E FT P +E+F L +E
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
NVL+ +N V ++DFG+A+ + D T + +MAP RV T+ DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 244
Query: 62 FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
FG+++ E FT P +E+F L +E
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA--TIGYMAPVEYGREGRVSTNGDVY 60
N +LD+ ++DFG+A+ + ++ +T A + +MA +E + + +T DV+
Sbjct: 222 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVW 280
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
SFG++L E TR P + D + + R + C
Sbjct: 281 SFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYC 321
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
++ + ++C E R + E+V+ +S I
Sbjct: 322 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
NVL+ +N V ++DFG+A+ + D T + +MAP RV T+ DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 244
Query: 62 FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
FG+++ E FT P +E+F L +E
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
NVL+ +N V ++DFG+A+ + D T + +MAP RV T+ DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 244
Query: 62 FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
FG+++ E FT P +E+F L +E
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
NVL+ +N V ++DFG+A+ + D T + +MAP RV T+ DV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 244
Query: 62 FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
FG+++ E FT P +E+F L +E
Sbjct: 245 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 279
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
NVL+ +N V ++DFG+A+ + D T + +MAP RV T+ DV+S
Sbjct: 179 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 236
Query: 62 FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
FG+++ E FT P +E+F L +E
Sbjct: 237 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 271
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 272 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
NVL+ +N V ++DFG+A+ + D T + +MAP RV T+ DV+S
Sbjct: 174 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 231
Query: 62 FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
FG+++ E FT P +E+F L +E
Sbjct: 232 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 266
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 267 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ L+DFG++K I D T+ YMAP R G + + D +
Sbjct: 155 PENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGH-TQSADWW 211
Query: 61 SFGIMLMEAFTRKKP 75
SFG+++ E T P
Sbjct: 212 SFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ L+DFG++K I D T+ YMAP R G + + D +
Sbjct: 154 PENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGH-TQSADWW 210
Query: 61 SFGIMLMEAFTRKKP 75
SFG+++ E T P
Sbjct: 211 SFGVLMFEMLTGTLP 225
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
NVL+ +N V ++DFG+A+ + D T + +MAP RV T+ DV+S
Sbjct: 176 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSDVWS 233
Query: 62 FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
FG+++ E FT P +E+F L +E
Sbjct: 234 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 268
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 269 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ L+DFG++K I D T+ YMAP R G + + D +
Sbjct: 154 PENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGH-TQSADWW 210
Query: 61 SFGIMLMEAFTRKKP 75
SFG+++ E T P
Sbjct: 211 SFGVLMFEMLTGTLP 225
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
NVL+ +N V ++DFG+A+ + D T + +MAP RV T+ DV+S
Sbjct: 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF--DRVYTHQSDVWS 290
Query: 62 FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
FG+++ E FT P +E+F L +E
Sbjct: 291 FGVLMWEIFTLGGSPYPGIPVEELFK-------------------------LLKEGHRMD 325
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 326 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG++++L + ++ T+ I + +P + ++ DV+S
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
+GI+L E + ++P EM + + V++ VD E C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
+ ++ L ++C + R ++IV+ I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG++++L + ++ T+ I + +P + ++ DV+S
Sbjct: 175 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 233
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
+GI+L E + ++P EM + + V++ VD E C
Sbjct: 234 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 273
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
+ ++ L ++C + R ++IV+ I D L RN G+
Sbjct: 274 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 311
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG++++L + ++ T+ I + +P + ++ DV+S
Sbjct: 148 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 206
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
+GI+L E + ++P EM + + V++ VD E C
Sbjct: 207 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 246
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
+ ++ L ++C + R ++IV+ I D L RN G+
Sbjct: 247 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 284
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG++++L + ++ T+ I + +P + ++ DV+S
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
+GI+L E + ++P EM + + V++ VD E C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
+ ++ L ++C + R ++IV+ I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG++++L + ++ T+ I + +P + ++ DV+S
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
+GI+L E + ++P EM + + V++ VD E C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
+ ++ L ++C + R ++IV+ I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG++++L + ++ T+ I + +P + ++ DV+S
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
+GI+L E + ++P EM + + V++ VD E C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
+ ++ L ++C + R ++IV+ I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG++++L + ++ T+ I + +P + ++ DV+S
Sbjct: 148 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 206
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
+GI+L E + ++P EM + + V++ VD E C
Sbjct: 207 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 246
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
+ ++ L ++C + R ++IV+ I D L RN G+
Sbjct: 247 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 284
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ ++V ++DFG+A+++ ED T + I + AP E G + DV+
Sbjct: 140 ANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAP-EAINFGSFTIKSDVW 196
Query: 61 SFGIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
SFGI+LME T + P M S EV+ A L R R +
Sbjct: 197 SFGILLMEIVTYGRIPYPGM-----------------SNPEVIRA--LERGYR-MPRPEN 236
Query: 120 CVSFVFNLAMECTIESPERR 139
C ++N+ M C PE R
Sbjct: 237 CPEELYNIMMRCWKNRPEER 256
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG++++L + ++ T+ I + +P + ++ DV+S
Sbjct: 165 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 223
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
+GI+L E + ++P EM + + V++ VD E C
Sbjct: 224 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 263
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
+ ++ L ++C + R ++IV+ I D L RN G+
Sbjct: 264 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 301
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++ V ++DFG+A+ + D T + +MAP E + + DV+SF
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 238
Query: 63 GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
G++L E FT P +E+F L +E
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 273
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG++++L + ++ T+ I + +P + ++ DV+S
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
+GI+L E + ++P EM + + V++ VD E C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
+ ++ L ++C + R ++IV+ I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG++++L + ++ T+ I + +P + ++ DV+S
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
+GI+L E + ++P EM + + V++ VD E C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
+ ++ L ++C + R ++IV+ I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG++++L + ++ T+ I + +P + ++ DV+S
Sbjct: 177 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
+GI+L E + ++P EM + + V++ VD E C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
+ ++ L ++C + R ++IV+ I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 3 NVLLDDNMVAHLSDFGIA-KLLIGEDQSMTQTQTLATIGYMAP------VEYGREGRVST 55
NVLL ++ A L+DFG+A + G+ T Q + T YMAP + + R+ +
Sbjct: 153 NVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ-VGTRRYMAPEVLEGAINFQRDAFLRI 211
Query: 56 NGDVYSFGIMLMEAFTRKK----PTDEM---FSGEMTLKRWINDLLSVSVMEVVDANLLT 108
D+Y+ G++L E +R K P DE F E+ + +L V V + + +
Sbjct: 212 --DMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKD 269
Query: 109 REDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
+H Q CV+ EC E R++A + +S IR S+
Sbjct: 270 HWLKHPGLAQLCVTI-----EECWDHDAEARLSAGCVEERVSLIRRSV 312
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA---TIGYMAPVEYGREGRVSTNGDV 59
N+L++ N+V +SDFG+++ L + T T L I + AP E + + ++ DV
Sbjct: 165 NILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP-EAIQYRKFTSASDV 223
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
+S+GI++ E M GE W D+ + V+ ++ +D
Sbjct: 224 WSYGIVMWEV---------MSYGERPY--W--DMTNQDVINAIE------QDYRLPPPMD 264
Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C S + L ++C + R +IV L K+
Sbjct: 265 CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 27/162 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG+ ++L + ++ T+ I + +P + ++ DV+S
Sbjct: 177 NILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFTSASDVWS 235
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
+GI+L E + ++P EM + + V++ VD E C
Sbjct: 236 YGIVLWEVMSYGERPYWEMSNQD--------------VIKAVD------EGYRLPPPMDC 275
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNVGA 162
+ ++ L ++C + R ++IV+ I D L RN G+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPGS 313
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA---TIGYMAPVEYGREGRVSTNGDV 59
N+L++ N+V +SDFG+++ L + T T L I + AP E + + ++ DV
Sbjct: 139 NILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP-EAIQYRKFTSASDV 197
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
+S+GI++ E M GE W D+ + V+ ++ +D
Sbjct: 198 WSYGIVMWEV---------MSYGERPY--W--DMTNQDVINAIE------QDYRLPPPMD 238
Query: 120 CVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C S + L ++C + R +IV L K+
Sbjct: 239 CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ ++V ++DFG+A+++ ED T + I + AP E G + DV+
Sbjct: 313 ANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAP-EAINFGSFTIKSDVW 369
Query: 61 SFGIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
SFGI+LME T + P M S EV+ A L R R +
Sbjct: 370 SFGILLMEIVTYGRIPYPGM-----------------SNPEVIRA--LERGYR-MPRPEN 409
Query: 120 CVSFVFNLAMECTIESPERR 139
C ++N+ M C PE R
Sbjct: 410 CPEELYNIMMRCWKNRPEER 429
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N + ++ + DFG+ + + D + L + +M+P E ++G +T DV+SF
Sbjct: 155 NCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSF 213
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T + + S E L+ V++ LL + D C
Sbjct: 214 GVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPD 254
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRNV 160
+ L C +P+ R + EI++ + + + FR V
Sbjct: 255 MLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 292
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++ V ++DFG+A+ + D T + +MAP E + + DV+SF
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 238
Query: 63 GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
G++L E FT P +E+F L +E
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 273
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++ V ++DFG+A+ + D T + +MAP E + + DV+SF
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 238
Query: 63 GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
G++L E FT P +E+F L +E
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 273
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++ V ++DFG+A+ + D T + +MAP E + + DV+SF
Sbjct: 169 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 227
Query: 63 GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
G++L E FT P +E+F L +E
Sbjct: 228 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 262
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 263 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++ V ++DFG+A+ + D T + +MAP E + + DV+SF
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 238
Query: 63 GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
G++L E FT P +E+F L +E
Sbjct: 239 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 273
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++ V ++DFG+A+ + D T + +MAP E + + DV+SF
Sbjct: 165 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 223
Query: 63 GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
G++L E FT P +E+F L +E
Sbjct: 224 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 258
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 259 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++ V ++DFG+A+ + D T + +MAP E + + DV+SF
Sbjct: 173 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 231
Query: 63 GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
G++L E FT P +E+F L +E
Sbjct: 232 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 266
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 267 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++ V ++DFG+A+ + D T + +MAP E + + DV+SF
Sbjct: 172 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSF 230
Query: 63 GIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAA 116
G++L E FT P +E+F L +E
Sbjct: 231 GVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMDK 265
Query: 117 KQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 266 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN-GDVYS 61
NVL+ ++ V ++DFG+A+ + D T + +MAP R+ T+ DV+S
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVWS 278
Query: 62 FGIMLMEAFTRKK------PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFA 115
FG++L E FT P +E+F L +E
Sbjct: 279 FGVLLWEIFTLGGSPYPGVPVEELFK-------------------------LLKEGHRMD 313
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + ++ + +C P +R K++V +L +I
Sbjct: 314 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL +N V + DFG+A+ + + + T + +MAP E + ST DV+S+
Sbjct: 229 NILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAP-ESIFDKIYSTKSDVWSY 287
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 288 GVLLWEIFS 296
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 20/150 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+L+ + +SDFG+++ + ED + ++Q + +MA +E + +T DV+SF
Sbjct: 180 NILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMA-IESLFDHIYTTQSDVWSF 238
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T + G + +R N L + ME D C
Sbjct: 239 GVLLWEIVTL---GGNPYPG-IPPERLFNLLKTGHRMERPD---------------NCSE 279
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
++ L ++C + P++R +I +L K+
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 20/150 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+L+ + +SDFG+++ + ED + ++Q + +MA +E + +T DV+SF
Sbjct: 180 NILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMA-IESLFDHIYTTQSDVWSF 238
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T + G + +R N L + ME D C
Sbjct: 239 GVLLWEIVTL---GGNPYPG-IPPERLFNLLKTGHRMERPD---------------NCSE 279
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
++ L ++C + P++R +I +L K+
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 20/150 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+L+ + +SDFG+++ + ED + ++Q + +MA +E + +T DV+SF
Sbjct: 180 NILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMA-IESLFDHIYTTQSDVWSF 238
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T + G + +R N L + ME D C
Sbjct: 239 GVLLWEIVTL---GGNPYPG-IPPERLFNLLKTGHRMERPD---------------NCSE 279
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
++ L ++C + P++R +I +L K+
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 27/152 (17%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP----VEYGREGRVSTN 56
PSN+LLD + L DFGI+ L+ S+ +T+ YMAP R+G
Sbjct: 154 PSNILLDRSGNIKLCDFGISGQLV---DSIAKTRDAGCRPYMAPERIDPSASRQG-YDVR 209
Query: 57 GDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRW--INDLLSVSVMEVVDANLLTREDRHF 114
DV+S GI L E T G +W + D L+ V++ L E+R F
Sbjct: 210 SDVWSLGITLYELAT----------GRFPYPKWNSVFDQLT-QVVKGDPPQLSNSEEREF 258
Query: 115 AAKQQCVSFVFNLAMECTIESPERRINAKEIV 146
+ SF+ N C + +R KE++
Sbjct: 259 SP-----SFI-NFVNLCLTKDESKRPKYKELL 284
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLDD+ +SD G+A + + E Q++ + T+GYMAP E + R + + D +
Sbjct: 314 PENILLDDHGHIRISDLGLA-VHVPEGQTI--KGRVGTVGYMAP-EVVKNERYTFSPDWW 369
Query: 61 SFGIMLMEAFTRKKP 75
+ G +L E + P
Sbjct: 370 ALGCLLYEMIAGQSP 384
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 61/158 (38%), Gaps = 34/158 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ + V +SDFG+++ + + + + AP E GR S+ DV+SF
Sbjct: 243 NCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAP-EALNYGRYSSESDVWSF 301
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAK----- 117
GI+L E F+ L S NL ++ R F K
Sbjct: 302 GILLWETFS----------------------LGASPY----PNLSNQQTREFVEKGGRLP 335
Query: 118 --QQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR 153
+ C VF L +C P +R + I EL IR
Sbjct: 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 61/158 (38%), Gaps = 34/158 (21%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ + V +SDFG+++ + + + + AP E GR S+ DV+SF
Sbjct: 243 NCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAP-EALNYGRYSSESDVWSF 301
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAK----- 117
GI+L E F+ L S NL ++ R F K
Sbjct: 302 GILLWETFS----------------------LGASPY----PNLSNQQTREFVEKGGRLP 335
Query: 118 --QQCVSFVFNLAMECTIESPERRINAKEIVTELSKIR 153
+ C VF L +C P +R + I EL IR
Sbjct: 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVLL + VA + DFG+A+ ++ + + + + +MAP E + + DV+S+
Sbjct: 182 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSY 240
Query: 63 GIMLMEAFT 71
GI+L E F+
Sbjct: 241 GILLWEIFS 249
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVLL + VA + DFG+A+ ++ + + + + +MAP E + + DV+S+
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSY 252
Query: 63 GIMLMEAFT 71
GI+L E F+
Sbjct: 253 GILLWEIFS 261
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 22/138 (15%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +NMV ++DFG+++ + D I +M P E R +T DV+++
Sbjct: 204 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP-ESIFYNRYTTESDVWAY 262
Query: 63 GIMLMEAFTRK-KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G++L E F+ +P M E+ + V D N+L A + C
Sbjct: 263 GVVLWEIFSYGLQPYYGMAHEEV-------------IYYVRDGNIL-------ACPENCP 302
Query: 122 SFVFNLAMECTIESPERR 139
++NL C + P R
Sbjct: 303 LELYNLMRLCWSKLPADR 320
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVLL + VA + DFG+A+ ++ + + + + +MAP E + + DV+S+
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSY 252
Query: 63 GIMLMEAFT 71
GI+L E F+
Sbjct: 253 GILLWEIFS 261
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVLL + VA + DFG+A+ ++ + + + + +MAP E + + DV+S+
Sbjct: 190 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSY 248
Query: 63 GIMLMEAFT 71
GI+L E F+
Sbjct: 249 GILLWEIFS 257
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVLL + VA + DFG+A+ ++ + + + + +MAP E + + DV+S+
Sbjct: 196 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSY 254
Query: 63 GIMLMEAFT 71
GI+L E F+
Sbjct: 255 GILLWEIFS 263
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 1 PSNVLL-DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
P N+LL V + DFG A D T + +MAP E S DV
Sbjct: 133 PPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAP-EVFEGSNYSEKCDV 186
Query: 60 YSFGIMLMEAFTRKKPTDEM 79
+S+GI+L E TR+KP DE+
Sbjct: 187 FSWGIILWEVITRRKPFDEI 206
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 1 PSNVLL-DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
P N+LL V + DFG A D T + +MAP E S DV
Sbjct: 134 PPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAP-EVFEGSNYSEKCDV 187
Query: 60 YSFGIMLMEAFTRKKPTDEM 79
+S+GI+L E TR+KP DE+
Sbjct: 188 FSWGIILWEVITRRKPFDEI 207
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ V + DFG+A+ ++ + + + + +MAP E EG + DV+S+
Sbjct: 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP-ESLFEGIYTIKSDVWSY 260
Query: 63 GIMLMEAFT 71
GI+L E F+
Sbjct: 261 GILLWEIFS 269
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVLL + VA + DFG+A+ ++ + + + + +MAP E + + DV+S+
Sbjct: 188 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSY 246
Query: 63 GIMLMEAFT 71
GI+L E F+
Sbjct: 247 GILLWEIFS 255
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L+ + L+DFG+A++ + M T + T+ Y AP E + +T D++
Sbjct: 148 PQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAP-EVLLQSSYATPVDLW 203
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW--INDLLSVSVMEVVDANL-LTREDRHFAAK 117
S G + E F R+KP +F G + + I D++ + E ++ L R+ H +
Sbjct: 204 SVGCIFAEMF-RRKP---LFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 259
Query: 118 QQCVSFVF-------NLAMECTIESPERRINA 142
Q FV +L ++C +P +RI+A
Sbjct: 260 QPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L+ + L+DFG+A++ + M T + T+ Y AP E + +T D++
Sbjct: 148 PQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAP-EVLLQSSYATPVDLW 203
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW--INDLLSVSVMEVVDANL-LTREDRHFAAK 117
S G + E F R+KP +F G + + I D++ + E ++ L R+ H +
Sbjct: 204 SVGCIFAEMF-RRKP---LFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 259
Query: 118 QQCVSFVF-------NLAMECTIESPERRINA 142
Q FV +L ++C +P +RI+A
Sbjct: 260 QPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L+ + L+DFG+A++ + M T + T+ Y AP E + +T D++
Sbjct: 148 PQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAP-EVLLQSSYATPVDLW 203
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW--INDLLSVSVMEVVDANL-LTREDRHFAAK 117
S G + E F R+KP +F G + + I D++ + E ++ L R+ H +
Sbjct: 204 SVGCIFAEMF-RRKP---LFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA 259
Query: 118 QQCVSFVF-------NLAMECTIESPERRINA 142
Q FV +L ++C +P +RI+A
Sbjct: 260 QPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
Query: 3 NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ ++DFG+AKLL + +D + + + I + AP E + S DV+S
Sbjct: 141 NILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP-ESLSDNIFSRQSDVWS 199
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
FG++L E FT D+ S R + V + L E + A C
Sbjct: 200 FGVVLYELFTY---CDKSCSPSAEFLRMMG--CERDVPALCRLLELLEEGQRLPAPPACP 254
Query: 122 SFVFNLAMECTIESPERRINAKEIVTEL 149
+ V L C SP+ R + + +L
Sbjct: 255 AEVHELMKLCWAPSPQDRPSFSALGPQL 282
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEY-GREGR-VSTNG 57
P N+LLD++ H++DF IA +L E TQ T+A T YMAP + R+G S
Sbjct: 143 PDNILLDEHGHVHITDFNIAAMLPRE----TQITTMAGTKPYMAPEMFSSRKGAGYSFAV 198
Query: 58 DVYSFGIMLMEAFTRKKP 75
D +S G+ E ++P
Sbjct: 199 DWWSLGVTAYELLRGRRP 216
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ D + ++DFG+A+L+ ED T + I + AP E G + DV+
Sbjct: 140 ANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 196
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T +
Sbjct: 197 SFGILLTEIVTHGR 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ D + ++DFG+A+L+ ED T + I + AP E G + DV+
Sbjct: 139 ANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 195
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T +
Sbjct: 196 SFGILLTEIVTHGR 209
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ D + ++DFG+A+L+ ED T + I + AP E G + DV+
Sbjct: 143 ANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 199
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T +
Sbjct: 200 SFGILLTEIVTHGR 213
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ D + ++DFG+A+L+ ED T + I + AP E G + DV+
Sbjct: 144 ANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 200
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T +
Sbjct: 201 SFGILLTEIVTHGR 214
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ D + ++DFG+A+L+ ED T + I + AP E G + DV+
Sbjct: 138 ANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 194
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T +
Sbjct: 195 SFGILLTEIVTHGR 208
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ D + ++DFG+A+L+ ED T + I + AP E G + DV+
Sbjct: 138 ANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 194
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T +
Sbjct: 195 SFGILLTEIVTHGR 208
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 41.6 bits (96), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLDD+ +SD G+A + + E Q++ + T+GYMAP E + R + + D +
Sbjct: 314 PENILLDDHGHIRISDLGLA-VHVPEGQTI--KGRVGTVGYMAP-EVVKNERYTFSPDWW 369
Query: 61 SFGIMLMEAFTRKKP 75
+ G +L E + P
Sbjct: 370 ALGCLLYEMIAGQSP 384
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ D + ++DFG+A+L+ ED T + I + AP E G + DV+
Sbjct: 147 ANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 203
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T +
Sbjct: 204 SFGILLTEIVTHGR 217
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ D + ++DFG+A+L+ ED T + I + AP E G + DV+
Sbjct: 138 ANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 194
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T +
Sbjct: 195 SFGILLTEIVTHGR 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ D + ++DFG+A+L+ ED T + I + AP E G + DV+
Sbjct: 133 ANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 189
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T +
Sbjct: 190 SFGILLTEIVTHGR 203
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 27/152 (17%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+L+ +N VA ++DFG+++ G++ + +T + +MA +E +TN DV+S+
Sbjct: 162 NILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMA-IESLNYSVYTTNSDVWSY 217
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ--QC 120
G++L E I L + A L + + + ++ C
Sbjct: 218 GVLLWE---------------------IVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 256
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
V++L +C E P R + +I+ L+++
Sbjct: 257 DDEVYDLMRQCWREKPYERPSFAQILVSLNRM 288
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ D + ++DFG+A+L+ ED T + I + AP E G + DV+
Sbjct: 134 ANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 190
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T +
Sbjct: 191 SFGILLTEIVTHGR 204
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ D + ++DFG+A+L+ ED T + I + AP E G + DV+
Sbjct: 144 ANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 200
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T +
Sbjct: 201 SFGILLTEIVTHGR 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ D + ++DFG+A+L+ ED T + I + AP E G + DV+
Sbjct: 146 ANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 202
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T +
Sbjct: 203 SFGILLTEIVTHGR 216
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 27/152 (17%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+L+ +N VA ++DFG+++ G++ + +T + +MA +E +TN DV+S+
Sbjct: 172 NILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMA-IESLNYSVYTTNSDVWSY 227
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ--QC 120
G++L E I L + A L + + + ++ C
Sbjct: 228 GVLLWE---------------------IVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 266
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
V++L +C E P R + +I+ L+++
Sbjct: 267 DDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 27/152 (17%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+L+ +N VA ++DFG+++ G++ + +T + +MA +E +TN DV+S+
Sbjct: 169 NILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMA-IESLNYSVYTTNSDVWSY 224
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ--QC 120
G++L E I L + A L + + + ++ C
Sbjct: 225 GVLLWE---------------------IVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 263
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
V++L +C E P R + +I+ L+++
Sbjct: 264 DDEVYDLMRQCWREKPYERPSFAQILVSLNRM 295
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ D + ++DFG+A+L+ ED T + I + AP E G + DV+
Sbjct: 148 ANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 204
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T +
Sbjct: 205 SFGILLTEIVTHGR 218
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
Query: 3 NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ ++DFG+AKLL + +D + + + I + AP E + S DV+S
Sbjct: 145 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP-ESLSDNIFSRQSDVWS 203
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
FG++L E FT D+ S R + V + L E + A C
Sbjct: 204 FGVVLYELFTY---CDKSCSPSAEFLRMMG--CERDVPALCRLLELLEEGQRLPAPPACP 258
Query: 122 SFVFNLAMECTIESPERRINAKEIVTEL 149
+ V L C SP+ R + + +L
Sbjct: 259 AEVHELMKLCWAPSPQDRPSFSALGPQL 286
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+N+L+ D + ++DFG+A+L+ ED T + I + AP E G + DV+
Sbjct: 138 ANILVSDTLSCKIADFGLARLI--EDAEXTAREGAKFPIKWTAP-EAINYGTFTIKSDVW 194
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T +
Sbjct: 195 SFGILLTEIVTHGR 208
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG--- 57
PSN+L+D N LSDFG ++ ++ D+ + ++ T +M P + E S NG
Sbjct: 180 PSNILMDKNGRVKLSDFGESEYMV--DKKIKGSR--GTYEFMPPEFFSNES--SYNGAKV 233
Query: 58 DVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN 105
D++S GI L F P FS +++L N++ + ++ +D N
Sbjct: 234 DIWSLGICLYVMFYNVVP----FSLKISLVELFNNIRTKNIEYPLDRN 277
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
Query: 3 NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ ++DFG+AKLL + +D + + + I + AP E + S DV+S
Sbjct: 144 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP-ESLSDNIFSRQSDVWS 202
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
FG++L E FT D+ S R + V + L E + A C
Sbjct: 203 FGVVLYELFTY---CDKSCSPSAEFLRMMGSERDVPALS--RLLELLEEGQRLPAPPACP 257
Query: 122 SFVFNLAMECTIESPERRINAKEIVTEL 149
+ V L C SP+ R + + +L
Sbjct: 258 AEVHELMKLCWAPSPQDRPSFSALGPQL 285
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAPVEYGREGRVSTNGDV 59
P N+L+ + A+L DFGIA D+ +TQ T+ T+ Y AP + E + D+
Sbjct: 162 PENILVSADDFAYLVDFGIASATT--DEKLTQLGNTVGTLYYXAPERFS-ESHATYRADI 218
Query: 60 YSFGIMLMEAFTRKKP 75
Y+ +L E T P
Sbjct: 219 YALTCVLYECLTGSPP 234
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E S + D++
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP-ELLTEKSASKSSDLW 218
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 219 ALGCIIYQ 226
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 147 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 204
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 205 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 258
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD++
Sbjct: 259 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 147 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 204
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 205 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 258
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD++
Sbjct: 259 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 144 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 201
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 202 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 255
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD++
Sbjct: 256 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 150 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 207
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 208 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 261
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD++
Sbjct: 262 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 299
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA---TIGYMAPVEYGREGRVSTNGDV 59
N+L++ N+V +SDFG+++ L T+T +L I + AP + ++ D
Sbjct: 148 NILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFR-KFTSASDA 206
Query: 60 YSFGIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
+S+GI++ E + ++P +M S +V++A +D
Sbjct: 207 WSYGIVMWEVMSFGERPYWDM-----------------SNQDVINA---IEQDYRLPPPP 246
Query: 119 QCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + + L ++C + R ++V+ L K+
Sbjct: 247 DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 147 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 204
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 205 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 258
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD++
Sbjct: 259 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 149 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 206
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 207 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 260
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD++
Sbjct: 261 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 298
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 144 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 201
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 202 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 255
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD++
Sbjct: 256 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 162 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 219
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 220 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 273
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD++
Sbjct: 274 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 143 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 200
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 201 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 254
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD++
Sbjct: 255 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 292
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 27/159 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG++++L + ++ T+ I + AP + ++ DV+S
Sbjct: 154 NILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR-KFTSASDVWS 212
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
+GI++ E + ++P EM + +V+ A E + C
Sbjct: 213 YGIVMWEVVSYGERPYWEMTN-----------------QDVIKA---VEEGYRLPSPMDC 252
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN 159
+ ++ L ++C + R EIV L D L RN
Sbjct: 253 PAALYQLMLDCWQKERNSRPKFDEIVNML----DKLIRN 287
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 151 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 208
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 209 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 262
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD++
Sbjct: 263 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 300
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 148 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 205
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 206 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 259
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD++
Sbjct: 260 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 297
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 162 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 219
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 220 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 273
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD++
Sbjct: 274 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 145 NILVENENRVKIGDFGLTKVL-PQDKEYYKVKEPGESPIFWYAP-ESLTESKFSVASDVW 202
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 203 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 256
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD++
Sbjct: 257 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 294
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGE-DQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVL+D N+V +SDFG++++L + D + T T I + AP S+ DV+S
Sbjct: 181 NVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR-TFSSASDVWS 239
Query: 62 FGIMLMEAFT 71
FG+++ E
Sbjct: 240 FGVVMWEVLA 249
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 144 NILVENENRVKIGDFGLTKVL-PQDKEFFKVKEPGESPIFWYAP-ESLTESKFSVASDVW 201
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 202 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 255
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD++
Sbjct: 256 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGE-DQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVL+D N+V +SDFG++++L + D + T T I + AP S+ DV+S
Sbjct: 181 NVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFR-TFSSASDVWS 239
Query: 62 FGIMLMEAFT 71
FG+++ E
Sbjct: 240 FGVVMWEVLA 249
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 142 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 199
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 200 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 253
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD +
Sbjct: 254 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 291
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL--ATIGYMAPVEYGREGRVSTNGDVY 60
N+L+++ + DFG+ K+L +D+ + + + I + AP E E + S DV+
Sbjct: 175 NILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAP-ESLTESKFSVASDVW 232
Query: 61 SFGIMLMEAFT----RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFA 115
SFG++L E FT K P E M ++ ++E++ N L R D
Sbjct: 233 SFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLPRPD---- 286
Query: 116 AKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
C ++ + EC + +R + +++ + +IRD +
Sbjct: 287 ---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMT-QTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVLL + A +SDFG++K L +D T ++ + + AP E + S+ DV+S
Sbjct: 140 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP-ECINFRKFSSRSDVWS 198
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEM 84
+G+ + EA + +KP +M E+
Sbjct: 199 YGVTMWEALSYGQKPYKKMKGPEV 222
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ ++DFG+AKLL + +D + + + I + AP E + S DV+S
Sbjct: 157 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP-ESLSDNIFSRQSDVWS 215
Query: 62 FGIMLMEAFT 71
FG++L E FT
Sbjct: 216 FGVVLYELFT 225
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+A+LL G+++ I +MA +E + + DV+S+
Sbjct: 170 NVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA-LECIHYRKFTHQSDVWSY 228
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E+ +LL + +R C
Sbjct: 229 GVTIWELMTFGGKPYDGIPTREI-------------------PDLLEKGER-LPQPPICT 268
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
V+ + ++C + + R KE+ E S++ RD
Sbjct: 269 IDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 303
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL----------IGEDQSMTQTQTLATIGYMAPVEYGRE 50
PSN+L++ N + DFG+A+++ G+ M T+ +AT Y AP
Sbjct: 140 PSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM--TEXVATRWYRAPEVMLTS 197
Query: 51 GRVSTNGDVYSFGIMLMEAFTRK 73
+ S DV+S G +L E F R+
Sbjct: 198 AKYSRAMDVWSCGCILAELFLRR 220
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P+NV LD L DFG+A++L D S +T + T YM+P + R + D++
Sbjct: 144 PANVFLDGKQNVKLGDFGLARIL-NHDTSFAKT-FVGTPYYMSPEQMNRMS-YNEKSDIW 200
Query: 61 SFGIMLME 68
S G +L E
Sbjct: 201 SLGCLLYE 208
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+A+LL G+++ I +MA +E + + DV+S+
Sbjct: 147 NVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA-LECIHYRKFTHQSDVWSY 205
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E+ +LL + +R C
Sbjct: 206 GVTIWELMTFGGKPYDGIPTREI-------------------PDLLEKGER-LPQPPICT 245
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
V+ + ++C + + R KE+ E S++ RD
Sbjct: 246 IDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 280
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMT-QTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVLL + A +SDFG++K L +D T ++ + + AP E + S+ DV+S
Sbjct: 466 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP-ECINFRKFSSRSDVWS 524
Query: 62 FGIMLMEAFTR-KKPTDEMFSGEM 84
+G+ + EA + +KP +M E+
Sbjct: 525 YGVTMWEALSYGQKPYKKMKGPEV 548
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 151 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 209
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 210 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 249
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
V+ + ++C + + R +E++ E SK+ RD
Sbjct: 250 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 284
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 25/158 (15%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSM-TQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG+++++ + +++ T T + + AP E + + ++ DV+S
Sbjct: 175 NILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAP-EAIQYRKFTSASDVWS 233
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
+GI++ E M GE W D+ + V++ ++ E A C
Sbjct: 234 YGIVMWEV---------MSYGERPY--W--DMSNQDVIKAIE------EGYRLPAPMDCP 274
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDSLFRN 159
+ + L ++C + R ++IV I D + RN
Sbjct: 275 AGLHQLMLDCWQKERAERPKFEQIVG----ILDKMIRN 308
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 25/154 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA---TIGYMAPVEYGREGRVSTNGDV 59
N+L++ N+V +SDFG+++ L T T +L I + AP + ++ D
Sbjct: 146 NILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR-KFTSASDA 204
Query: 60 YSFGIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
+S+GI++ E + ++P +M S +V++A +D
Sbjct: 205 WSYGIVMWEVMSFGERPYWDM-----------------SNQDVINA---IEQDYRLPPPP 244
Query: 119 QCVSFVFNLAMECTIESPERRINAKEIVTELSKI 152
C + + L ++C + R ++V+ L K+
Sbjct: 245 DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L+D + DFG+++L ++ T +MAP E R+ + DVYS
Sbjct: 168 PNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAP-EVLRDEPSNEKSDVYS 224
Query: 62 FGIMLMEAFTRKKP 75
FG++L E T ++P
Sbjct: 225 FGVILWELATLQQP 238
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL----------IGEDQSMTQTQTLATIGYMAPVEYGRE 50
PSN+L++ N + DFG+A+++ G+ M T+ +AT Y AP
Sbjct: 140 PSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM--TEYVATRWYRAPEVMLTS 197
Query: 51 GRVSTNGDVYSFGIMLMEAFTRK 73
+ S DV+S G +L E F R+
Sbjct: 198 AKYSRAMDVWSCGCILAELFLRR 220
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 27/151 (17%)
Query: 6 LDDN--MVAHLSDFGIAKLLIGEDQSM-TQTQTLATIGYMAPVEYGREGRVST-NGDVYS 61
LD+N + A ++DFG+++ QS+ + + L +MAP G E T D YS
Sbjct: 160 LDENAPVCAKVADFGLSQ------QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYS 213
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
F ++L T + P DE G++ N++ E + C
Sbjct: 214 FAMILYTILTGEGPFDEYSYGKIKF-----------------INMIREEGLRPTIPEDCP 256
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
+ N+ C P++R + IV ELS++
Sbjct: 257 PRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 149 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 207
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 208 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 247
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 248 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 208
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 209 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 248
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
V+ + ++C + + R +E++ E SK+ RD
Sbjct: 249 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 283
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 199
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 200 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 239
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 240 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 148 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 206
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 207 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 246
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 247 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 205
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 245
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 149 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 207
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 208 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 247
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 248 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 153 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 211
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 212 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 251
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 252 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 282
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 208
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 209 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 248
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
V+ + ++C + + R +E++ E SK+ RD
Sbjct: 249 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 283
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 212
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 213 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 252
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 253 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 212
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 213 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 252
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 253 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 148 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 206
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 207 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 246
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 247 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 205
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 245
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 205
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 245
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 208
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 209 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 248
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
V+ + ++C + + R +E++ E SK+ RD
Sbjct: 249 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 283
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 144 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 202
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 203 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 242
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 243 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 273
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 212
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 213 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 252
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 253 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 205
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 245
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 73/157 (46%), Gaps = 31/157 (19%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE-----GRVSTNG 57
N L++D V +SDFG+++ ++ ++++ +++G PV + + S+
Sbjct: 150 NCLVNDQGVVKVSDFGLSRYVLDDEET-------SSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 58 DVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAK 117
D+++FG+++ E ++ G+M +R+ N S + + L R H A++
Sbjct: 203 DIWAFGVLMWEIYSL---------GKMPYERFTN---SETAEHIAQGLRLYRP--HLASE 248
Query: 118 QQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD 154
+ V+ + C E + R K +++ + + D
Sbjct: 249 K-----VYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 181 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 239
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 240 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 279
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 280 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 310
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 138 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 196
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 197 ALGCIIYQ 204
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 135 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 193
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 194 ALGCIIYQ 201
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 172 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 230
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 231 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 270
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 271 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 301
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 137 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 195
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 196 ALGCIIYQ 203
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 136 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 194
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 195 ALGCIIYQ 202
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 142 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 200
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 201 ALGCIIYQ 208
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L++D V +SDFG+++ ++ ++ + ++ +P E + S+ D+++F
Sbjct: 135 NCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV--RWSPPEVLMYSKFSSKSDIWAF 192
Query: 63 GIMLMEAFTRKKPTDEMFSGEMT 85
G+++ E ++ K E F+ T
Sbjct: 193 GVLMWEIYSLGKMPYERFTNSET 215
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 131 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 190
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 191 SCGIVLTAMLAGELPWDQ 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLDDN+ ++DFG++ ++ D + +T + + Y AP + DV+
Sbjct: 136 PENLLLDDNLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEVINGKLYAGPEVDVW 192
Query: 61 SFGIMLMEAFTRKKPTDEMF 80
S GI+L + P D+ F
Sbjct: 193 SCGIVLYVMLVGRLPFDDEF 212
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 157 PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP-ELLTEKSACKSSDLW 215
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 216 ALGCIIYQ 223
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+NVL+ ++++ ++DFG+A+++ ED T + I + AP E G + DV+
Sbjct: 139 ANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAP-EAINFGCFTIKSDVW 195
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T K
Sbjct: 196 SFGILLYEIVTYGK 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L+D + DFG+++L + T +MAP E R+ + DVYS
Sbjct: 168 PNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAP-EVLRDEPSNEKSDVYS 224
Query: 62 FGIMLMEAFTRKKP 75
FG++L E T ++P
Sbjct: 225 FGVILWELATLQQP 238
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 165 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 223
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 224 ALGCIIYQ 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 216
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 217 ALGCIIYQ 224
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 161 PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP-ELLTEKSACKSSDLW 219
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 220 ALGCIIYQ 227
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 216
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 217 ALGCIIYQ 224
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 218
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 219 ALGCIIYQ 226
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 216
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 217 ALGCIIYQ 224
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 157 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 215
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 216 ALGCIIYQ 223
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP-ELLTEKSACKSSDLW 216
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 217 ALGCIIYQ 224
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 218
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 219 ALGCIIYQ 226
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 218
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 219 ALGCIIYQ 226
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 161 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 219
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 220 ALGCIIYQ 227
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S GI+L + P D+ W
Sbjct: 192 SCGIVLTAMLAGELPWDQPSDSXQEYSDW 220
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 46/88 (52%), Gaps = 12/88 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE-----GRVSTNG 57
N L++D V +SDFG+++ ++ ++ + +++G PV + + S+
Sbjct: 134 NCLVNDQGVVKVSDFGLSRYVLDDEYT-------SSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 58 DVYSFGIMLMEAFTRKKPTDEMFSGEMT 85
D+++FG+++ E ++ K E F+ T
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYERFTNSET 214
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 218
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 219 ALGCIIYQ 226
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 192
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 208
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 209 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 248
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + +C + + R +E++ E SK+
Sbjct: 249 IDVYMIMRKCWMIDADSRPKFRELIIEFSKM 279
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
+N+ L +++ + DFG+A + S Q +I +MAP + + S DV
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 192
Query: 60 YSFGIMLMEAFTRKKP 75
Y+FGI+L E T + P
Sbjct: 193 YAFGIVLYELMTGQLP 208
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 163 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSACKSSDLW 221
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 222 ALGCIIYQ 229
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 46/88 (52%), Gaps = 12/88 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE-----GRVSTNG 57
N L++D V +SDFG+++ ++ ++ + +++G PV + + S+
Sbjct: 130 NCLVNDQGVVKVSDFGLSRYVLDDEYT-------SSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 58 DVYSFGIMLMEAFTRKKPTDEMFSGEMT 85
D+++FG+++ E ++ K E F+ T
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYERFTNSET 210
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 157 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 215
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 216 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 255
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + +C + + R +E++ E SK+
Sbjct: 256 IDVYMIMRKCWMIDADSRPKFRELIIEFSKM 286
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
+N+ L +++ + DFG+A + S Q +I +MAP + + S DV
Sbjct: 135 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 194
Query: 60 YSFGIMLMEAFTRKKP 75
Y+FGI+L E T + P
Sbjct: 195 YAFGIVLYELMTGQLP 210
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
+N+ L +++ + DFG+A + S Q +I +MAP + + S DV
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 192
Query: 60 YSFGIMLMEAFTRKKP 75
Y+FGI+L E T + P
Sbjct: 193 YAFGIVLYELMTGQLP 208
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 3 NVLLDDNMVAHLSDFGIA-KLLIGEDQSMTQTQTLATIGYMAP------VEYGREGRVST 55
NVLL +N+ A ++DFG+A K G+ T Q + T YMAP + + R+ +
Sbjct: 161 NVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ-VGTRRYMAPEVLEGAINFQRDAFLRI 219
Query: 56 NGDVYSFGIMLMEAFTR----KKPTDEM---FSGEMTLKRWINDLLSVSVMEVVDANLLT 108
D+Y+ G++L E +R P DE F E+ + D+ V V + L
Sbjct: 220 --DMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVL-- 275
Query: 109 REDRHFAAKQQCVSFVFNLAMECTIESPERRINA---KEIVTELSKI 152
R + K ++ + EC E R++A E +T++ ++
Sbjct: 276 ---RDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
+N+ L +++ + DFG+A + S Q +I +MAP + + S DV
Sbjct: 138 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 197
Query: 60 YSFGIMLMEAFTRKKP 75
Y+FGI+L E T + P
Sbjct: 198 YAFGIVLYELMTGQLP 213
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 27/151 (17%)
Query: 6 LDDN--MVAHLSDFGIAKLLIGEDQSM-TQTQTLATIGYMAPVEYGREGRVST-NGDVYS 61
LD+N + A ++DFG ++ QS+ + + L +MAP G E T D YS
Sbjct: 160 LDENAPVCAKVADFGTSQ------QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYS 213
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
F ++L T + P DE G++ N++ E + C
Sbjct: 214 FAMILYTILTGEGPFDEYSYGKIKF-----------------INMIREEGLRPTIPEDCP 256
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
+ N+ C P++R + IV ELS++
Sbjct: 257 PRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 33/139 (23%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
+N+L+ ++V ++DFG+A++ I + AP E G + DV+S
Sbjct: 307 ANILVSASLVCKIADFGLARV-----------GAKFPIKWTAP-EAINFGSFTIKSDVWS 354
Query: 62 FGIMLMEAFTRKK-PTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
FGI+LME T + P M S EV+ A L R R + C
Sbjct: 355 FGILLMEIVTYGRIPYPGM-----------------SNPEVIRA--LERGYR-MPRPENC 394
Query: 121 VSFVFNLAMECTIESPERR 139
++N+ M C PE R
Sbjct: 395 PEELYNIMMRCWKNRPEER 413
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LL+++M ++DFG AK+L E + + T Y++P E E + D++
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSAXKSSDLW 218
Query: 61 SFGIMLME 68
+ G ++ +
Sbjct: 219 ALGCIIYQ 226
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 27/140 (19%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVLLD++ + + DFG+AK + G + + + + + AP E +E + DV+S
Sbjct: 164 NVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAP-ECLKEYKFYYASDVWS 222
Query: 62 FGIMLMEAFT-----RKKPTD-----EMFSGEMTLKRWINDLLSVSVMEVVDANLLTRED 111
FG+ L E T + PT + G+MT+ R + +LL L R D
Sbjct: 223 FGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR-LTELLE-------RGERLPRPD 274
Query: 112 RHFAAKQQCVSFVFNLAMEC 131
+ C + V++L C
Sbjct: 275 K-------CPAEVYHLMKNC 287
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 31/157 (19%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE-----GRVSTNG 57
N L++D V +SDFG+++ ++ ++ + +++G PV + + S+
Sbjct: 150 NCLVNDQGVVKVSDFGLSRYVLDDEYT-------SSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 58 DVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAK 117
D+++FG+++ E ++ G+M +R+ N S + + L R H A++
Sbjct: 203 DIWAFGVLMWEIYSL---------GKMPYERFTN---SETAEHIAQGLRLYRP--HLASE 248
Query: 118 QQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD 154
+ V+ + C E + R K +++ + + D
Sbjct: 249 K-----VYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVLLD++ + + DFG+AK + G + + + + + AP E +E + DV+S
Sbjct: 141 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP-ECLKECKFYYASDVWS 199
Query: 62 FGIMLMEAFT 71
FG+ L E T
Sbjct: 200 FGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVLLD++ + + DFG+AK + G + + + + + AP E +E + DV+S
Sbjct: 142 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP-ECLKECKFYYASDVWS 200
Query: 62 FGIMLMEAFT 71
FG+ L E T
Sbjct: 201 FGVTLYELLT 210
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+AKLL E++ I +MA +E + DV+S+
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 205
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 245
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI-RDS 155
V+ + +C + + R +E++ E SK+ RD
Sbjct: 246 IDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
+N+ L +++ + DFG+A + S Q +I +MAP + + S DV
Sbjct: 160 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 219
Query: 60 YSFGIMLMEAFTRKKP 75
Y+FGI+L E T + P
Sbjct: 220 YAFGIVLYELMTGQLP 235
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
+N+ L +++ + DFG+A + S Q +I +MAP + + S DV
Sbjct: 138 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 197
Query: 60 YSFGIMLMEAFTRKKP 75
Y+FGI+L E T + P
Sbjct: 198 YAFGIVLYELMTGQLP 213
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
+N+ L +++ + DFG+A + S Q +I +MAP + + S DV
Sbjct: 161 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 220
Query: 60 YSFGIMLMEAFTRKKP 75
Y+FGI+L E T + P
Sbjct: 221 YAFGIVLYELMTGQLP 236
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+ +SDFG+A + ++ + T+ Y+AP R + DV+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 61 SFGIMLMEAFTRKKPTDE 78
S GI+L + P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 46/88 (52%), Gaps = 12/88 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE-----GRVSTNG 57
N L++D V +SDFG+++ ++ ++ + +++G PV + + S+
Sbjct: 135 NCLVNDQGVVKVSDFGLSRYVLDDEYT-------SSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 58 DVYSFGIMLMEAFTRKKPTDEMFSGEMT 85
D+++FG+++ E ++ K E F+ T
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSET 215
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 178 NILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 236
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 237 GVLLWEIFS 245
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 236
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 237 GVLLWEIFS 245
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L+ L+DFG+A++ M T + T+ Y AP E + +T D++
Sbjct: 148 PENILVTSGGTVKLADFGLARIY---SYQMALTPVVVTLWYRAP-EVLLQSTYATPVDMW 203
Query: 61 SFGIMLMEAFTRKKPTDEMFSG 82
S G + E F RK +F G
Sbjct: 204 SVGCIFAEMFRRKP----LFCG 221
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVLLD++ + + DFG+AK + G + + + + + AP E +E + DV+S
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP-ECLKEYKFYYASDVWS 205
Query: 62 FGIMLMEAFTR 72
FG+ L E T
Sbjct: 206 FGVTLYELLTH 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 31/157 (19%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGRE-----GRVSTNG 57
N L++D V +SDFG+++ ++ ++ + +++G PV + + S+
Sbjct: 141 NCLVNDQGVVKVSDFGLSRYVLDDEYT-------SSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 58 DVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAK 117
D+++FG+++ E ++ G+M +R+ N S + + L R H A++
Sbjct: 194 DIWAFGVLMWEIYSL---------GKMPYERFTN---SETAEHIAQGLRLYRP--HLASE 239
Query: 118 QQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRD 154
+ V+ + C E + R K +++ + + D
Sbjct: 240 K-----VYTIMYSCWHEKADERPTFKILLSNILDVMD 271
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVLLD++ + + DFG+AK + G + + + + + AP E +E + DV+S
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP-ECLKEYKFYYASDVWS 205
Query: 62 FGIMLMEAFTR 72
FG+ L E T
Sbjct: 206 FGVTLYELLTH 216
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 227
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 228 GVLLWEIFS 236
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 9 NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLME 68
N + ++DFG+A+ E T+ +MAP E R S DV+S+G++L E
Sbjct: 152 NKILKITDFGLAR----EWHRTTKMSAAGAYAWMAP-EVIRASMFSKGSDVWSYGVLLWE 206
Query: 69 AFTRKKP 75
T + P
Sbjct: 207 LLTGEVP 213
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 236
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 237 GVLLWEIFS 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 227
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 228 GVLLWEIFS 236
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
+N+ L + + + DFG+A + S Q ++ +MAP + S DV
Sbjct: 161 NNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDV 220
Query: 60 YSFGIMLMEAFTRKKPTDEM 79
YS+GI+L E T + P +
Sbjct: 221 YSYGIVLYELMTGELPYSHI 240
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 178 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 236
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 237 GVLLWEIFS 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 169 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 227
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 228 GVLLWEIFS 236
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDVY 60
N+LLD N L+DFG++K + D++ TI YMAP V G G D +
Sbjct: 189 NILLDSNGHVVLTDFGLSKEFVA-DETERAYDFCGTIEYMAPDIVRGGDSGH-DKAVDWW 246
Query: 61 SFGIMLMEAFTRKKP 75
S G+++ E T P
Sbjct: 247 SLGVLMYELLTGASP 261
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 221 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 279
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 280 GVLLWEIFS 288
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P+NV LD L DFG+A++L D S + + T YM+P + R + D++
Sbjct: 144 PANVFLDGKQNVKLGDFGLARIL-NHDTSFAKA-FVGTPYYMSPEQMNRMS-YNEKSDIW 200
Query: 61 SFGIMLME 68
S G +L E
Sbjct: 201 SLGCLLYE 208
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 223 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 281
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 282 GVLLWEIFS 290
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 196
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 197 GVLLWEIAT 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 142 NCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 199
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 200 GVLLWEIAT 208
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 228 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 286
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 287 GVLLWEIFS 295
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 236
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 237 GVLLWEIFS 245
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P+NV LD L DFG+A++L D+ + + + T YM+P + R + D++
Sbjct: 144 PANVFLDGKQNVKLGDFGLARIL-NHDEDFAK-EFVGTPYYMSPEQMNRMS-YNEKSDIW 200
Query: 61 SFGIMLME 68
S G +L E
Sbjct: 201 SLGCLLYE 208
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTN---- 56
PSN+LLD+ L DFGI+ L+ +D++ ++ A YMAP +
Sbjct: 153 PSNILLDERGQIKLCDFGISGRLV-DDKAKDRSAGCAA--YMAPERIDPPDPTKPDYDIR 209
Query: 57 GDVYSFGIMLMEAFTRKKP 75
DV+S GI L+E T + P
Sbjct: 210 ADVWSLGISLVELATGQFP 228
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 20/138 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
N+LL + + DFG+ + L +D + Q + AP E + S D +
Sbjct: 141 NLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP-ESLKTRTFSHASDTWM 199
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
FG+ L E FT + + WI L ++ +D +E + C
Sbjct: 200 FGVTLWEMFTYGQ------------EPWIG-LNGSQILHKID-----KEGERLPRPEDCP 241
Query: 122 SFVFNLAMECTIESPERR 139
++N+ ++C PE R
Sbjct: 242 QDIYNVMVQCWAHKPEDR 259
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 169 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 227
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 228 GVLLWEIFS 236
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 203
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 204 GVLLWEIAT 212
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 20/138 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
N+LL + + DFG+ + L +D + Q + AP E + S D +
Sbjct: 151 NLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP-ESLKTRTFSHASDTWM 209
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
FG+ L E FT + + WI L ++ +D +E + C
Sbjct: 210 FGVTLWEMFTYGQ------------EPWIG-LNGSQILHKID-----KEGERLPRPEDCP 251
Query: 122 SFVFNLAMECTIESPERR 139
++N+ ++C PE R
Sbjct: 252 QDIYNVMVQCWAHKPEDR 269
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 196
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 197 GVLLWEIAT 205
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 174 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 232
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 233 GVLLWEIFS 241
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 180 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 238
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 239 GVLLWEIFS 247
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 230 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 288
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 289 GVLLWEIFS 297
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 198
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 199 GVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 198
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 199 GVLLWEIAT 207
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP----VEYGREGRVSTN 56
P N+L+D N L+DFG + L + ED ++ + + T Y++P G +GR
Sbjct: 203 PDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPE 261
Query: 57 GDVYSFGIMLMEAFTRKKP 75
D +S G+ + E + P
Sbjct: 262 CDWWSLGVCMYEMLYGETP 280
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL---IGEDQSMTQTQT-----LATIGYMAPVEYGREGR 52
PSN+L++ N + DFG+A+++ ++ T Q+ +AT Y AP +
Sbjct: 140 PSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAK 199
Query: 53 VSTNGDVYSFGIMLMEAFTRK 73
S DV+S G +L E F R+
Sbjct: 200 YSRAMDVWSCGCILAELFLRR 220
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 215 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 273
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 274 GVLLWEIFS 282
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 203
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 204 GVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 203
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 204 GVLLWEIAT 212
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 20/138 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
N+LL + + DFG+ + L +D + Q + AP E + S D +
Sbjct: 141 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP-ESLKTRTFSHASDTWM 199
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
FG+ L E FT + + WI L ++ +D +E + C
Sbjct: 200 FGVTLWEMFTYGQ------------EPWIG-LNGSQILHKID-----KEGERLPRPEDCP 241
Query: 122 SFVFNLAMECTIESPERR 139
++N+ ++C PE R
Sbjct: 242 QDIYNVMVQCWAHKPEDR 259
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 20/138 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
N+LL + + DFG+ + L +D + Q + AP E + S D +
Sbjct: 145 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP-ESLKTRTFSHASDTWM 203
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
FG+ L E FT + + WI L ++ +D +E + C
Sbjct: 204 FGVTLWEMFTYGQ------------EPWIG-LNGSQILHKID-----KEGERLPRPEDCP 245
Query: 122 SFVFNLAMECTIESPERR 139
++N+ ++C PE R
Sbjct: 246 QDIYNVMVQCWAHKPEDR 263
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 198
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 199 GVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 198
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 199 GVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 198
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 199 GVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 145 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 202
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 203 GVLLWEIAT 211
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG AKLL E++ I +MA +E + DV+S+
Sbjct: 151 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 209
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 210 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 249
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 250 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 280
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 198
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 199 GVLLWEIAT 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 154 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 211
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 212 GVLLWEIAT 220
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 203
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 204 GVLLWEIAT 212
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + V + DFG+A+ + + + + + +MAP E + + DV+SF
Sbjct: 174 NILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTIQSDVWSF 232
Query: 63 GIMLMEAFT 71
G++L E F+
Sbjct: 233 GVLLWEIFS 241
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 203
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 204 GVLLWEIAT 212
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG AKLL E++ I +MA +E + DV+S+
Sbjct: 147 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 205
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 245
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 200
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 201 GVLLWEIAT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 20/138 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
N+LL + + DFG+ + L +D + Q + AP E + S D +
Sbjct: 151 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP-ESLKTRTFSHASDTWM 209
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
FG+ L E FT + + WI L ++ +D +E + C
Sbjct: 210 FGVTLWEMFTYGQ------------EPWIG-LNGSQILHKID-----KEGERLPRPEDCP 251
Query: 122 SFVFNLAMECTIESPERR 139
++N+ ++C PE R
Sbjct: 252 QDIYNVMVQCWAHKPEDR 269
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG+A+LL ++ I +MA +E R + DV+S+
Sbjct: 149 NVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA-LESILRRRFTHQSDVWSY 207
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E+ +LL + +R C
Sbjct: 208 GVTVWELMTFGAKPYDGIPAREI-------------------PDLLEKGER-LPQPPICT 247
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + E R +E+V+E S++
Sbjct: 248 IDVYMIMVKCWMIDSECRPRFRELVSEFSRM 278
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG AKLL E++ I +MA +E + DV+S+
Sbjct: 149 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 207
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 208 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 247
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 248 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N++L+ L+DFG+ K I D ++T T TI YMAP R G + D +
Sbjct: 149 PENIMLNHQGHVKLTDFGLCKESI-HDGTVTHT-FCGTIEYMAPEILMRSGH-NRAVDWW 205
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSV 98
S G ++ + T P F+GE K+ I+ +L +
Sbjct: 206 SLGALMYDMLTGAPP----FTGE-NRKKTIDKILKCKL 238
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 200
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 201 GVLLWEIAT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 20/138 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
N+LL + + DFG+ + L +D + Q + AP E + S D +
Sbjct: 141 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP-ESLKTRTFSHASDTWM 199
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
FG+ L E FT + + WI L ++ +D +E + C
Sbjct: 200 FGVTLWEMFTYGQ------------EPWIG-LNGSQILHKID-----KEGERLPRPEDCP 241
Query: 122 SFVFNLAMECTIESPERR 139
++N+ ++C PE R
Sbjct: 242 QDIYNVMVQCWAHKPEDR 259
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 20/138 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
N+LL + + DFG+ + L +D + Q + AP E + S D +
Sbjct: 145 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP-ESLKTRTFSHASDTWM 203
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
FG+ L E FT + + WI L ++ +D +E + C
Sbjct: 204 FGVTLWEMFTYGQ------------EPWIG-LNGSQILHKID-----KEGERLPRPEDCP 245
Query: 122 SFVFNLAMECTIESPERR 139
++N+ ++C PE R
Sbjct: 246 QDIYNVMVQCWAHKPEDR 263
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG AKLL E++ I +MA +E + DV+S+
Sbjct: 154 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 212
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 213 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 252
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + ++C + + R +E++ E SK+
Sbjct: 253 IDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 348 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 405
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 406 GVLLWEIAT 414
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDV 59
P+N+LLD++ +SD G+A D S + ++ T GYMAP + ++ D
Sbjct: 320 PANILLDEHGHVRISDLGLAC-----DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 60 YSFGIMLME------AFTRKKPTDEMFSGEMTL 86
+S G ML + F + K D+ MTL
Sbjct: 375 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDV 59
P+N+LLD++ +SD G+A D S + ++ T GYMAP + ++ D
Sbjct: 320 PANILLDEHGHVRISDLGLAC-----DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 60 YSFGIMLME------AFTRKKPTDEMFSGEMTL 86
+S G ML + F + K D+ MTL
Sbjct: 375 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 196
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 197 GVLLWEIAT 205
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDV 59
P+N+LLD++ +SD G+A D S + ++ T GYMAP + ++ D
Sbjct: 320 PANILLDEHGHVRISDLGLAC-----DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 60 YSFGIMLME------AFTRKKPTDEMFSGEMTL 86
+S G ML + F + K D+ MTL
Sbjct: 375 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 387 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 444
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 445 GVLLWEIAT 453
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP----VEYGREGRVSTN 56
PSNVL++ + DFGI+ L+ S+ +T YMAP E ++G S
Sbjct: 182 PSNVLINALGQVKMCDFGISGYLV---DSVAKTIDAGCKPYMAPERINPELNQKG-YSVK 237
Query: 57 GDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWIND 92
D++S GI ++E + P D + LK+ + +
Sbjct: 238 SDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 273
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDV 59
P+N+LLD++ +SD G+A D S + ++ T GYMAP + ++ D
Sbjct: 319 PANILLDEHGHVRISDLGLAC-----DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 373
Query: 60 YSFGIMLME------AFTRKKPTDEMFSGEMTL 86
+S G ML + F + K D+ MTL
Sbjct: 374 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 406
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDVY 60
+NVL+ ++++ ++DFG+A+++ ED T + I + AP E G + +V+
Sbjct: 138 ANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAP-EAINFGCFTIKSNVW 194
Query: 61 SFGIMLMEAFTRKK 74
SFGI+L E T K
Sbjct: 195 SFGILLYEIVTYGK 208
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
+NVLL ++ L+DFG+A L D + + + T +MAP E ++ + D++S
Sbjct: 133 ANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAP-EVIKQSAYDSKADIWS 189
Query: 62 FGIMLMEAFTRKKPTDEM 79
GI +E + P E+
Sbjct: 190 LGITAIELARGEPPHSEL 207
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 23/171 (13%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L D+ L DFG+ G QT ++ Y AP + + + DV+
Sbjct: 136 PENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSEADVW 194
Query: 61 SFGIMLMEAFTRKKPTDE---------MFSGEMTLKRWI--NDLLSVSVMEVVDA----- 104
S GI+L P D+ + G+ + +W+ + +L + M VD
Sbjct: 195 SMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRIS 254
Query: 105 --NLLTR----EDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTEL 149
NLL +D ++ + Q + +L +C E N ++ + +L
Sbjct: 255 MKNLLNHPWIMQDYNYPVEWQSKNPFIHLDDDCVTELSVHHRNNRQTMEDL 305
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 21/143 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 345 NCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 402
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
G++L E T ++ + + +V + L +D + C
Sbjct: 403 GVLLWEIATYG----------------MSPYPGIDLSQVYE---LLEKDYRMERPEGCPE 443
Query: 123 FVFNLAMECTIESPERRINAKEI 145
V+ L C +P R + EI
Sbjct: 444 KVYELMRACWQWNPSDRPSFAEI 466
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
+N+ L +++ + DFG+A S Q +I +MAP + + S DV
Sbjct: 133 NNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 192
Query: 60 YSFGIMLMEAFTRKKP 75
Y+FGI+L E T + P
Sbjct: 193 YAFGIVLYELMTGQLP 208
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
+NVLL ++ L+DFG+A L D + + + T +MAP E ++ + D++S
Sbjct: 148 ANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAP-EVIKQSAYDSKADIWS 204
Query: 62 FGIMLMEAFTRKKPTDEM 79
GI +E + P E+
Sbjct: 205 LGITAIELARGEPPHSEL 222
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
+N+ L +++ + DFG+A S Q +I +MAP + + S DV
Sbjct: 153 NNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 212
Query: 60 YSFGIMLMEAFTRKKP 75
Y+FGI+L E T + P
Sbjct: 213 YAFGIVLYELMTGQLP 228
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 27/151 (17%)
Query: 6 LDDN--MVAHLSDFGIAKLLIGEDQSM-TQTQTLATIGYMAPVEYGREGRVST-NGDVYS 61
LD+N + A ++DF +++ QS+ + + L +MAP G E T D YS
Sbjct: 160 LDENAPVCAKVADFSLSQ------QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYS 213
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
F ++L T + P DE G++ N++ E + C
Sbjct: 214 FAMILYTILTGEGPFDEYSYGKIKF-----------------INMIREEGLRPTIPEDCP 256
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
+ N+ C P++R + IV ELS++
Sbjct: 257 PRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 142 NCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 199
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 200 GVLLWEIAT 208
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
+N+ L +++ + DFG+A S Q +I +MAP + + S DV
Sbjct: 161 NNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 220
Query: 60 YSFGIMLMEAFTRKKP 75
Y+FGI+L E T + P
Sbjct: 221 YAFGIVLYELMTGQLP 236
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N + ++DFG+++L+ G D I + AP E + S DV++F
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAP-ESLAYNKFSIKSDVWAF 200
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 201 GVLLWEIAT 209
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N L+ +N V ++DFG+++L+ G D I + AP E S DV++F
Sbjct: 160 NCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP-ESLAYNTFSIKSDVWAF 217
Query: 63 GIMLMEAFT 71
G++L E T
Sbjct: 218 GVLLWEIAT 226
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 22/87 (25%)
Query: 1 PSNVLLDDNMVAHLSDFGIA-KLLIGEDQSMTQTQTLATIGYMAP-----------VEYG 48
P N+LLDDNM LSDFG + L GE + T GY+AP YG
Sbjct: 228 PENILLDDNMQIRLSDFGFSCHLEPGE----KLRELCGTPGYLAPEILKCSMDETHPGYG 283
Query: 49 REGRVSTNGDVYSFGIMLMEAFTRKKP 75
+E D+++ G++L P
Sbjct: 284 KE------VDLWACGVILFTLLAGSPP 304
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
+NVLL ++ L+DFG+A L D + + + T +MAP E ++ + D++S
Sbjct: 133 ANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAP-EVIKQSAYDSKADIWS 189
Query: 62 FGIMLMEAFTRKKPTDEM 79
GI +E + P E+
Sbjct: 190 LGITAIELARGEPPHSEL 207
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAP-VEYGREGRVSTNGD 58
P NVLLDD+ +SD G+A L T+T+ A T G+MAP + G E S D
Sbjct: 317 PENVLLDDDGNVRISDLGLAVEL---KAGQTKTKGYAGTPGFMAPELLLGEEYDFSV--D 371
Query: 59 VYSFGIMLMEAFTRKKP 75
++ G+ L E + P
Sbjct: 372 YFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 1 PSNVLLDDNMVAHLSDFGIA-KLLIGEDQSMTQTQTLA-TIGYMAP-VEYGREGRVSTNG 57
P NVLLDD+ +SD G+A +L G+ T+T+ A T G+MAP + G E S
Sbjct: 317 PENVLLDDDGNVRISDLGLAVELKAGQ----TKTKGYAGTPGFMAPELLLGEEYDFSV-- 370
Query: 58 DVYSFGIMLMEAFTRKKP 75
D ++ G+ L E + P
Sbjct: 371 DYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 1 PSNVLLDDNMVAHLSDFGIA-KLLIGEDQSMTQTQTLA-TIGYMAP-VEYGREGRVSTNG 57
P NVLLDD+ +SD G+A +L G+ T+T+ A T G+MAP + G E S
Sbjct: 317 PENVLLDDDGNVRISDLGLAVELKAGQ----TKTKGYAGTPGFMAPELLLGEEYDFSV-- 370
Query: 58 DVYSFGIMLMEAFTRKKP 75
D ++ G+ L E + P
Sbjct: 371 DYFALGVTLYEMIAARGP 388
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+++ ++DFG++ ++ D + +T + + Y AP + DV+
Sbjct: 131 PENLLLDEHLNVKIADFGLSNIM--TDGNFLKT-SCGSPNYAAPEVISGKLYAGPEVDVW 187
Query: 61 SFGIMLMEAFTRKKPTDE 78
S G++L R+ P D+
Sbjct: 188 SCGVILYVMLCRRLPFDD 205
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG AKLL E++ I +MA +E + DV+S+
Sbjct: 149 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 207
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 208 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 247
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + +C + + R +E++ E SK+
Sbjct: 248 IDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 1 PSNVLLDDNMVAHLSDFGIA-KLLIGEDQSMTQTQTLA-TIGYMAP-VEYGREGRVSTNG 57
P NVLLDD+ +SD G+A +L G+ T+T+ A T G+MAP + G E S
Sbjct: 317 PENVLLDDDGNVRISDLGLAVELKAGQ----TKTKGYAGTPGFMAPELLLGEEYDFSV-- 370
Query: 58 DVYSFGIMLMEAFTRKKP 75
D ++ G+ L E + P
Sbjct: 371 DYFALGVTLYEMIAARGP 388
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVL+ ++DFG AKLL E++ I +MA +E + DV+S+
Sbjct: 149 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSY 207
Query: 63 GIMLMEAFT-RKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E T KP D + + E++ ++L + +R C
Sbjct: 208 GVTVWELMTFGSKPYDGIPASEIS-------------------SILEKGER-LPQPPICT 247
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKI 152
V+ + +C + + R +E++ E SK+
Sbjct: 248 IDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L+ L+DFG+A++ M + T+ Y AP E + +T D++
Sbjct: 140 PENILVTSGGTVKLADFGLARIY---SYQMALAPVVVTLWYRAP-EVLLQSTYATPVDMW 195
Query: 61 SFGIMLMEAFTRKKPTDEMFSG 82
S G + E F RK +F G
Sbjct: 196 SVGCIFAEMFRRKP----LFCG 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+++ ++DFG++ ++ D + +T + + Y AP + DV+
Sbjct: 141 PENLLLDEHLNVKIADFGLSNIM--TDGNFLKT-SCGSPNYAAPEVISGKLYAGPEVDVW 197
Query: 61 SFGIMLMEAFTRKKPTDE 78
S G++L R+ P D+
Sbjct: 198 SCGVILYVMLCRRLPFDD 215
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+++ ++DFG++ ++ D + +T + + Y AP + DV+
Sbjct: 140 PENLLLDEHLNVKIADFGLSNIM--TDGNFLKT-SCGSPNYAAPEVISGKLYAGPEVDVW 196
Query: 61 SFGIMLMEAFTRKKPTDE 78
S G++L R+ P D+
Sbjct: 197 SCGVILYVMLCRRLPFDD 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD+++ ++DFG++ ++ D + +T + + Y AP + DV+
Sbjct: 135 PENLLLDEHLNVKIADFGLSNIM--TDGNFLKT-SCGSPNYAAPEVISGKLYAGPEVDVW 191
Query: 61 SFGIMLMEAFTRKKPTDE 78
S G++L R+ P D+
Sbjct: 192 SCGVILYVMLCRRLPFDD 209
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQT--LATIGYMAPVEYGREGRVSTNGD 58
N+LL ++ ++DFG++ L G D + + + + T +MAP + D
Sbjct: 145 GNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKAD 204
Query: 59 VYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQ 118
++SFGI +E T P + ++ + ND S+ V D +L + + F +
Sbjct: 205 IWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET-GVQDKEMLKKYGKSF---R 260
Query: 119 QCVSFVFNLAMECTIESPERRINAKEIV 146
+ +S C + PE+R A E++
Sbjct: 261 KMISL-------CLQKDPEKRPTAAELL 281
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
+NVLL ++ L+DFG+A L D + + + T +MAP E ++ + D++S
Sbjct: 153 ANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAP-EVIKQSAYDSKADIWS 209
Query: 62 FGIMLMEAFTRKKPTDEM 79
GI +E + P E+
Sbjct: 210 LGITAIELARGEPPHSEL 227
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 3 NVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQT--LATIGYMAPVEYGREGRVSTNGDV 59
N+LL ++ ++DFG++ L G D + + + + T +MAP + D+
Sbjct: 151 NILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADI 210
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQ 119
+SFGI +E T P + ++ + ND S+ V D +L + + F ++
Sbjct: 211 WSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET-GVQDKEMLKKYGKSF---RK 266
Query: 120 CVSFVFNLAMECTIESPERRINAKEIV 146
+S C + PE+R A E++
Sbjct: 267 MISL-------CLQKDPEKRPTAAELL 286
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 17/139 (12%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P NVLLD +M A ++DFG++ ++ D +T + + Y AP D++
Sbjct: 139 PENVLLDAHMNAKIADFGLSNMM--SDGEFLRT-SCGSPNYAAPEVISGRLYAGPEVDIW 195
Query: 61 SFGIMLMEAFTRKKPTDE---------MFSGEMTLKRWINDLLSVSVMEVVDANLLTRED 111
S G++L P D+ + G + ++N ++ +M ++ + L R
Sbjct: 196 SCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRAT 255
Query: 112 -----RHFAAKQQCVSFVF 125
H KQ S++F
Sbjct: 256 IKDIREHEWFKQDLPSYLF 274
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
+N+ L ++ + DFG+A + S Q +I +MAP + S DV
Sbjct: 137 NNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDV 196
Query: 60 YSFGIMLMEAFTRKKP 75
Y+FGI+L E T + P
Sbjct: 197 YAFGIVLYELMTGQLP 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG++++L + ++ T+ I + AP + ++ DV+S
Sbjct: 161 NILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR-KFTSASDVWS 219
Query: 62 FGIMLMEAFT 71
+GI++ E +
Sbjct: 220 YGIVMWEVMS 229
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+L++ L DFG++ LI E + + T YM+P E + S D++
Sbjct: 136 PSNILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSP-ERLQGTHYSVQSDIW 190
Query: 61 SFGIMLMEAFTRKKPTDEM 79
S G+ L+E + P M
Sbjct: 191 SMGLSLVEMAVGRYPRPPM 209
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG++++L + ++ T+ I + AP + ++ DV+S
Sbjct: 146 NILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR-KFTSASDVWS 204
Query: 62 FGIMLMEAFT 71
+GI++ E +
Sbjct: 205 YGIVMWEVMS 214
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ + L+DFG+A+ +S T + T+ Y AP + ST+ D++
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTSVDIW 204
Query: 61 SFGIMLMEAFTRK 73
S G + E T K
Sbjct: 205 SIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ + L+DFG+A+ +S T + T+ Y AP + ST+ D++
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTSVDIW 204
Query: 61 SFGIMLMEAFTRK 73
S G + E T K
Sbjct: 205 SIGCIFAEMITGK 217
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPVEYGREGRVSTNGDVYS 61
N+L++ N+V +SDFG++++L + ++ T+ I + AP + ++ DV+S
Sbjct: 140 NILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR-KFTSASDVWS 198
Query: 62 FGIMLMEAFT 71
+GI++ E +
Sbjct: 199 YGIVMWEVMS 208
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 14/73 (19%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-----VEYGREGRVST 55
PSN+ L D + DFG+ L + + +T++ T+ YM+P +YG+E
Sbjct: 164 PSNIFLVDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKE----- 215
Query: 56 NGDVYSFGIMLME 68
D+Y+ G++L E
Sbjct: 216 -VDLYALGLILAE 227
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
+NVLL + L+DFG+A L D + + + T +MAP E ++ + D++S
Sbjct: 149 ANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAP-EVIQQSAYDSKADIWS 205
Query: 62 FGIMLMEAFTRKKPTDEM 79
GI +E + P +M
Sbjct: 206 LGITAIELAKGEPPNSDM 223
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L+ L+DFG+A++ M + T+ Y AP E + +T D++
Sbjct: 140 PENILVTSGGTVKLADFGLARIY---SYQMALDPVVVTLWYRAP-EVLLQSTYATPVDMW 195
Query: 61 SFGIMLMEAFTRKKPTDEMFSG 82
S G + E F RK +F G
Sbjct: 196 SVGCIFAEMFRRKP----LFCG 213
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 26/151 (17%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+L++ L DFG++ LI SM + + T YM+P E + S D++
Sbjct: 152 PSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP-ERLQGTHYSVQSDIW 206
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEV---VDANLLTREDRHFAAK 117
S G+ L+E + P SG M I +LL V E + + + + E + F K
Sbjct: 207 SMGLSLVEMAVGRYPIGSG-SGSMA----IFELLDYIVNEPPPKLPSGVFSLEFQDFVNK 261
Query: 118 QQCVSFVFNLAMECTIESPERRINAKEIVTE 148
C I++P R + K+++
Sbjct: 262 -------------CLIKNPAERADLKQLMVH 279
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + + DFG+A+ + + + + + +MAP E + DV+S+
Sbjct: 198 NILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAP-ESIFNCVYTFESDVWSY 256
Query: 63 GIMLMEAFT 71
GI L E F+
Sbjct: 257 GIFLWELFS 265
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L+ L+DFG+A++ M + T+ Y AP E + +T D++
Sbjct: 140 PENILVTSGGTVKLADFGLARIY---SYQMALFPVVVTLWYRAP-EVLLQSTYATPVDMW 195
Query: 61 SFGIMLMEAFTRKK 74
S G + E F RK
Sbjct: 196 SVGCIFAEMFRRKP 209
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 11 VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
VA + DFG+A+ + + + +M P + EG ++ D +SFG++L E F
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF-MEGIFTSKTDTWSFGVLLWEIF 254
Query: 71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAME 130
+ G M N V+E V + R D + C V+ + +
Sbjct: 255 SL---------GYMPYPSKSNQ----EVLEFVTSG--GRMD----PPKNCPGPVYRIMTQ 295
Query: 131 CTIESPERRIN 141
C PE R N
Sbjct: 296 CWQHQPEDRPN 306
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N++L+ L+DFG+ K I D ++T TI YMAP R G + D +
Sbjct: 149 PENIMLNHQGHVKLTDFGLCKESI-HDGTVTHX-FCGTIEYMAPEILMRSGH-NRAVDWW 205
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSV 98
S G ++ + T P F+GE K+ I+ +L +
Sbjct: 206 SLGALMYDMLTGAPP----FTGE-NRKKTIDKILKCKL 238
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 11 VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
VA + DFG+A+ + + + +M P E EG ++ D +SFG++L E F
Sbjct: 188 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP-EAFMEGIFTSKTDTWSFGVLLWEIF 246
Query: 71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAME 130
+ G M N V+E V + R D + C V+ + +
Sbjct: 247 SL---------GYMPYPSKSNQ----EVLEFVTSG--GRMD----PPKNCPGPVYRIMTQ 287
Query: 131 CTIESPERRIN 141
C PE R N
Sbjct: 288 CWQHQPEDRPN 298
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 11 VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
VA + DFG+A+ + + + +M P + EG ++ D +SFG++L E F
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF-MEGIFTSKTDTWSFGVLLWEIF 254
Query: 71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAME 130
+ G M N V+E V + R D + C V+ + +
Sbjct: 255 SL---------GYMPYPSKSNQ----EVLEFVTSG--GRMD----PPKNCPGPVYRIMTQ 295
Query: 131 CTIESPERRIN 141
C PE R N
Sbjct: 296 CWQHQPEDRPN 306
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 11 VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
VA + DFG+A+ + + + +M P + EG ++ D +SFG++L E F
Sbjct: 173 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF-MEGIFTSKTDTWSFGVLLWEIF 231
Query: 71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAME 130
+ G M N V+E V + R D + C V+ + +
Sbjct: 232 SL---------GYMPYPSKSNQ----EVLEFVTSG--GRMD----PPKNCPGPVYRIMTQ 272
Query: 131 CTIESPERRIN 141
C PE R N
Sbjct: 273 CWQHQPEDRPN 283
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 11 VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
VA + DFG+A+ + + + +M P E EG ++ D +SFG++L E F
Sbjct: 182 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP-EAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAME 130
+ G M N V+E V + R D + C V+ + +
Sbjct: 241 SL---------GYMPYPSKSNQ----EVLEFVTSG--GRMD----PPKNCPGPVYRIMTQ 281
Query: 131 CTIESPERRIN 141
C PE R N
Sbjct: 282 CWQHQPEDRPN 292
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 11 VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
VA + DFG+A+ + + + +M P + EG ++ D +SFG++L E F
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF-MEGIFTSKTDTWSFGVLLWEIF 254
Query: 71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAME 130
+ G M N V+E V + R D + C V+ + +
Sbjct: 255 SL---------GYMPYPSKSNQ----EVLEFVTSG--GRMD----PPKNCPGPVYRIMTQ 295
Query: 131 CTIESPERRIN 141
C PE R N
Sbjct: 296 CWQHQPEDRPN 306
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 11 VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
VA + DFG+A+ + + + +M P E EG ++ D +SFG++L E F
Sbjct: 208 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP-EAFMEGIFTSKTDTWSFGVLLWEIF 266
Query: 71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAME 130
+ G M N V+E V + R D + C V+ + +
Sbjct: 267 SL---------GYMPYPSKSNQ----EVLEFVTSG--GRMD----PPKNCPGPVYRIMTQ 307
Query: 131 CTIESPERRIN 141
C PE R N
Sbjct: 308 CWQHQPEDRPN 318
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 11 VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
VA + DFG+A+ + + + +M P E EG ++ D +SFG++L E F
Sbjct: 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP-EAFMEGIFTSKTDTWSFGVLLWEIF 239
Query: 71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAME 130
+ G M N V+E V + R D + C V+ + +
Sbjct: 240 SL---------GYMPYPSKSNQ----EVLEFVTSG--GRMD----PPKNCPGPVYRIMTQ 280
Query: 131 CTIESPERRIN 141
C PE R N
Sbjct: 281 CWQHQPEDRPN 291
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 11 VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
VA + DFG+A+ + + + +M P + EG ++ D +SFG++L E F
Sbjct: 182 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF-MEGIFTSKTDTWSFGVLLWEIF 240
Query: 71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAME 130
+ G M N V+E V + R D + C V+ + +
Sbjct: 241 SL---------GYMPYPSKSNQ----EVLEFVTSG--GRMD----PPKNCPGPVYRIMTQ 281
Query: 131 CTIESPERRIN 141
C PE R N
Sbjct: 282 CWQHQPEDRPN 292
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 11 VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
VA + DFG+A+ + + + +M P E EG ++ D +SFG++L E F
Sbjct: 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP-EAFMEGIFTSKTDTWSFGVLLWEIF 239
Query: 71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAME 130
+ G M N V+E V + R D + C V+ + +
Sbjct: 240 SL---------GYMPYPSKSNQ----EVLEFVTSG--GRMD----PPKNCPGPVYRIMTQ 280
Query: 131 CTIESPERRIN 141
C PE R N
Sbjct: 281 CWQHQPEDRPN 291
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 11 VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
VA + DFG+A+ + + + +M P E EG ++ D +SFG++L E F
Sbjct: 198 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP-EAFMEGIFTSKTDTWSFGVLLWEIF 256
Query: 71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAME 130
+ G M N V+E V + R D + C V+ + +
Sbjct: 257 SL---------GYMPYPSKSNQ----EVLEFVTSG--GRMD----PPKNCPGPVYRIMTQ 297
Query: 131 CTIESPERRIN 141
C PE R N
Sbjct: 298 CWQHQPEDRPN 308
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGE-DQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+L++ + DFG+A++ E D + T+ +AT Y AP + + D+
Sbjct: 172 PSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDI 231
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 232 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 263
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 25/152 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVL+ N L DFG+++ + ED + + ++ I +MAP E R ++ DV+
Sbjct: 141 NVLVSSNDCVKLGDFGLSRYM--EDSTXXKASKGKLPIKWMAP-ESINFRRFTSASDVWM 197
Query: 62 FGIMLMEAFTRK-KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
FG+ + E KP F G ND++ C
Sbjct: 198 FGVCMWEILMHGVKP----FQGVKN-----NDVIG-----------RIENGERLPMPPNC 237
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
+++L +C P RR E+ +LS I
Sbjct: 238 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 11 VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
VA + DFG+A+ + + + +M P + EG ++ D +SFG++L E F
Sbjct: 199 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF-MEGIFTSKTDTWSFGVLLWEIF 257
Query: 71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAME 130
+ G M N V+E V + R D + C V+ + +
Sbjct: 258 SL---------GYMPYPSKSNQ----EVLEFVTSG--GRMD----PPKNCPGPVYRIMTQ 298
Query: 131 CTIESPERRIN 141
C PE R N
Sbjct: 299 CWQHQPEDRPN 309
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + + DFG+A+ + + + + + +MAP E + DV+S+
Sbjct: 191 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP-ESIFNCVYTFESDVWSY 249
Query: 63 GIMLMEAFT 71
GI L E F+
Sbjct: 250 GIFLWELFS 258
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T T + T+ Y AP ST D++
Sbjct: 131 PQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIW 188
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 189 SLGCIFAEMVTRR----ALFPGD 207
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 11 VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
VA + DFG+A+ + + + +M P + EG ++ D +SFG++L E F
Sbjct: 222 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF-MEGIFTSKTDTWSFGVLLWEIF 280
Query: 71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAME 130
+ G M N V+E V + R D + C V+ + +
Sbjct: 281 SL---------GYMPYPSKSNQ----EVLEFVTSG--GRMD----PPKNCPGPVYRIMTQ 321
Query: 131 CTIESPERRIN 141
C PE R N
Sbjct: 322 CWQHQPEDRPN 332
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 11 VAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAF 70
VA + DFG+A+ + + + +M P + EG ++ D +SFG++L E F
Sbjct: 182 VAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAF-MEGIFTSKTDTWSFGVLLWEIF 240
Query: 71 TRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVSFVFNLAME 130
+ G M N V+E V + R D + C V+ + +
Sbjct: 241 SL---------GYMPYPSKSNQ----EVLEFVTSG--GRMD----PPKNCPGPVYRIMTQ 281
Query: 131 CTIESPERRIN 141
C PE R N
Sbjct: 282 CWQHQPEDRPN 292
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + + DFG+A+ + + + + + +MAP E + DV+S+
Sbjct: 193 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP-ESIFNCVYTFESDVWSY 251
Query: 63 GIMLMEAFT 71
GI L E F+
Sbjct: 252 GIFLWELFS 260
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 25/152 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVL+ N L DFG+++ + ED + + ++ I +MAP E R ++ DV+
Sbjct: 141 NVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP-ESINFRRFTSASDVWM 197
Query: 62 FGIMLMEAFTRK-KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
FG+ + E KP F G ND++ C
Sbjct: 198 FGVCMWEILMHGVKP----FQGVKN-----NDVIG-----------RIENGERLPMPPNC 237
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
+++L +C P RR E+ +LS I
Sbjct: 238 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T T + T+ Y AP ST D++
Sbjct: 138 PQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIW 195
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 196 SLGCIFAEMVTRR----ALFPGD 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 25/152 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVL+ N L DFG+++ + ED + + ++ I +MAP E R ++ DV+
Sbjct: 146 NVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP-ESINFRRFTSASDVWM 202
Query: 62 FGIMLMEAFTRK-KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
FG+ + E KP F G ND++ C
Sbjct: 203 FGVCMWEILMHGVKP----FQGVKN-----NDVIG-----------RIENGERLPMPPNC 242
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
+++L +C P RR E+ +LS I
Sbjct: 243 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 25/152 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVL+ N L DFG+++ + ED + + ++ I +MAP E R ++ DV+
Sbjct: 141 NVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP-ESINFRRFTSASDVWM 197
Query: 62 FGIMLMEAFTRK-KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
FG+ + E KP F G ND++ C
Sbjct: 198 FGVCMWEILMHGVKP----FQGVKN-----NDVIG-----------RIENGERLPMPPNC 237
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
+++L +C P RR E+ +LS I
Sbjct: 238 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + + DFG+A+ + + + + + +MAP E + DV+S+
Sbjct: 198 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP-ESIFNCVYTFESDVWSY 256
Query: 63 GIMLMEAFT 71
GI L E F+
Sbjct: 257 GIFLWELFS 265
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+L++ L DFG++ LI SM + + T YMAP E + S D++
Sbjct: 143 PSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMAP-ERLQGTHYSVQSDIW 197
Query: 61 SFGIMLMEAFTRKKP 75
S G+ L+E + P
Sbjct: 198 SMGLSLVELAVGRYP 212
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 25/152 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVL+ N L DFG+++ + ED + + ++ I +MAP E R ++ DV+
Sbjct: 138 NVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP-ESINFRRFTSASDVWM 194
Query: 62 FGIMLMEAFTRK-KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
FG+ + E KP F G ND++ C
Sbjct: 195 FGVCMWEILMHGVKP----FQGVKN-----NDVIG-----------RIENGERLPMPPNC 234
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
+++L +C P RR E+ +LS I
Sbjct: 235 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 156 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 215
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 216 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 247
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 25/152 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVL+ N L DFG+++ + ED + + ++ I +MAP E R ++ DV+
Sbjct: 143 NVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP-ESINFRRFTSASDVWM 199
Query: 62 FGIMLMEAFTRK-KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
FG+ + E KP F G ND++ C
Sbjct: 200 FGVCMWEILMHGVKP----FQGVKN-----NDVIG-----------RIENGERLPMPPNC 239
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
+++L +C P RR E+ +LS I
Sbjct: 240 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL + + DFG+A+ + + + + + +MAP E + DV+S+
Sbjct: 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP-ESIFNCVYTFESDVWSY 233
Query: 63 GIMLMEAFT 71
GI L E F+
Sbjct: 234 GIFLWELFS 242
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 152 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 211
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 212 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 243
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 157 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 216
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 217 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 248
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-----VEYGREGRVST 55
P NVLLD N L+DFG + L + +D ++ + + T Y++P +E G G+
Sbjct: 203 PDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM-GKYGP 260
Query: 56 NGDVYSFGIMLMEAFTRKKP 75
D +S G+ + E + P
Sbjct: 261 ECDWWSLGVCMYEMLYGETP 280
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 158 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 217
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 218 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 249
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 149 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 208
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 209 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 240
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 156 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 215
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 216 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 247
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 25/152 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVL+ N L DFG+++ + ED + + ++ I +MAP E R ++ DV+
Sbjct: 169 NVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP-ESINFRRFTSASDVWM 225
Query: 62 FGIMLMEAFTRK-KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
FG+ + E KP F G ND++ C
Sbjct: 226 FGVCMWEILMHGVKP----FQGVKN-----NDVIG-----------RIENGERLPMPPNC 265
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
+++L +C P RR E+ +LS I
Sbjct: 266 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 25/152 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVL+ N L DFG+++ + ED + + ++ I +MAP E R ++ DV+
Sbjct: 144 NVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP-ESINFRRFTSASDVWM 200
Query: 62 FGIMLMEAFTRK-KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
FG+ + E KP F G ND++ C
Sbjct: 201 FGVCMWEILMHGVKP----FQGVKN-----NDVIG-----------RIENGERLPMPPNC 240
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
+++L +C P RR E+ +LS I
Sbjct: 241 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 156 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 215
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 216 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 247
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 154 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 213
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 214 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 245
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 152 PSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 211
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 212 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 243
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 156 PSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 215
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 216 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 247
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 160 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 219
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 220 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 251
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 152 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 211
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 212 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 243
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 150 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 209
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 210 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 241
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 154 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 213
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 214 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 245
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-----VEYGREGRVST 55
P NVLLD N L+DFG + L + +D ++ + + T Y++P +E G G+
Sbjct: 219 PDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM-GKYGP 276
Query: 56 NGDVYSFGIMLMEAFTRKKP 75
D +S G+ + E + P
Sbjct: 277 ECDWWSLGVCMYEMLYGETP 296
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 150 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 209
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 210 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 241
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 152 PSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 211
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 212 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 243
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 172 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 231
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 232 WSVGCILAEMLSNR----PIFPGKHYLDQ-LNHILGI 263
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
+N+ L ++ + DFG+A S Q +I +MAP + S DV
Sbjct: 149 NNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDV 208
Query: 60 YSFGIMLMEAFTRKKP 75
Y+FGI+L E T + P
Sbjct: 209 YAFGIVLYELMTGQLP 224
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG-DV 59
P+N+LLD+N V L+DFG+AK +++ + T Y AP E R+ G D+
Sbjct: 140 PNNLLLDENGVLKLADFGLAKSFGSPNRAY--XHQVVTRWYRAP-ELLFGARMYGVGVDM 196
Query: 60 YSFGIMLMEAFTR 72
++ G +L E R
Sbjct: 197 WAVGCILAELLLR 209
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 156 PSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 215
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 216 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 247
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 12/116 (10%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+ L+D+M + DFG+A + E + T Y+AP ++G S D++S
Sbjct: 172 NLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPEVLCKKGH-SFEVDIWSL 228
Query: 63 GIMLMEAFTRKKPTD---------EMFSGEMTLKRWINDLLSVSVMEVVDANLLTR 109
G +L K P + + E ++ R IN + S + ++ A+ R
Sbjct: 229 GCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHADPTLR 284
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG--- 57
P+N L+ D M+ L DFGIA + + S+ + + T+ YM P NG
Sbjct: 135 PANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 193
Query: 58 -------DVYSFGIMLMEAFTRKKPTDEMFS 81
DV+S G +L K P ++ +
Sbjct: 194 SKISPKSDVWSLGCILYYMTYGKTPFQQIIN 224
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+L++ L DFG++ LI SM + + T YM+P E + S D++
Sbjct: 160 PSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP-ERLQGTHYSVQSDIW 214
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTL 86
S G+ L+E + P + E+ L
Sbjct: 215 SMGLSLVEMAVGRYPIPPPDAKELEL 240
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDV 59
+N+ L ++ + DFG+A S Q +I +MAP + S DV
Sbjct: 149 NNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDV 208
Query: 60 YSFGIMLMEAFTRKKP 75
Y+FGI+L E T + P
Sbjct: 209 YAFGIVLYELMTGQLP 224
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 172 PSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 231
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 232 WSVGCILAEMLSNR----PIFPGKHYLDQ-LNHILGI 263
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG--- 57
P+N L+ D M+ L DFGIA + + S+ + + T+ YM P NG
Sbjct: 139 PANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 197
Query: 58 -------DVYSFGIMLMEAFTRKKPTDEMFS 81
DV+S G +L K P ++ +
Sbjct: 198 SKISPKSDVWSLGCILYYMTYGKTPFQQIIN 228
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 12/116 (10%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+ L+D+M + DFG+A + E + T Y+AP ++G S D++S
Sbjct: 172 NLFLNDDMDVKIGDFGLATKI--EFDGERKKXLCGTPNYIAPEVLCKKGH-SFEVDIWSL 228
Query: 63 GIMLMEAFTRKKPTD---------EMFSGEMTLKRWINDLLSVSVMEVVDANLLTR 109
G +L K P + + E ++ R IN + S + ++ A+ R
Sbjct: 229 GCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHADPTLR 284
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+L++ L DFG++ LI SM + + T YM+P E + S D++
Sbjct: 133 PSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP-ERLQGTHYSVQSDIW 187
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTL 86
S G+ L+E + P + E+ L
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+L++ L DFG++ LI SM + + T YM+P E + S D++
Sbjct: 133 PSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP-ERLQGTHYSVQSDIW 187
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTL 86
S G+ L+E + P + E+ L
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
N+ L+D+M + DFG+A + E + T Y+AP ++G S D++S
Sbjct: 155 GNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPEVLCKKGH-SFEVDIWS 211
Query: 62 FGIMLMEAFTRKKPTD---------EMFSGEMTLKRWINDLLSVSVMEVVDANLLTR 109
G +L K P + + E ++ R IN + S + ++ A+ R
Sbjct: 212 LGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHADPTLR 268
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 152 PSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 211
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 212 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 243
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 25/152 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVL+ N L DFG+++ + ED + + ++ I +MAP E R ++ DV+
Sbjct: 521 NVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP-ESINFRRFTSASDVWM 577
Query: 62 FGIMLMEAFTRK-KPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
FG+ + E KP F G ND++ C
Sbjct: 578 FGVCMWEILMHGVKP----FQGVKN-----NDVIG-----------RIENGERLPMPPNC 617
Query: 121 VSFVFNLAMECTIESPERRINAKEIVTELSKI 152
+++L +C P RR E+ +LS I
Sbjct: 618 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 66/155 (42%), Gaps = 22/155 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N +L ++M ++DFG+++ + D + + ++A +E + + + DV++F
Sbjct: 167 NCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA-LESLADNLYTVHSDVWAF 225
Query: 63 GIMLMEAFTR-KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCV 121
G+ + E TR + P + + E+ N L +R +C+
Sbjct: 226 GVTMWEIMTRGQTPYAGIENAEIY-------------------NYLIGGNR-LKQPPECM 265
Query: 122 SFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
V++L +C P++R + + EL I L
Sbjct: 266 EEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG--- 57
P+N L+ D M+ L DFGIA + + S+ + + T+ YM P NG
Sbjct: 155 PANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 213
Query: 58 -------DVYSFGIMLMEAFTRKKPTDEMFS 81
DV+S G +L K P ++ +
Sbjct: 214 SKISPKSDVWSLGCILYYMTYGKTPFQQIIN 244
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+L++ L DFG++ LI SM + + T YM+P E + S D++
Sbjct: 133 PSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP-ERLQGTHYSVQSDIW 187
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQC 120
S G+ L+E + P + E + +++ E++D + E +
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKE-------DSRPPMAIFELLD--YIVNE-----PPPKL 233
Query: 121 VSFVFNLAME-----CTIESPERRINAKEIVTE 148
S VF+L + C I++P R + K+++
Sbjct: 234 PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 266
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 12/116 (10%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+ L+D+M + DFG+A + E + T Y+AP ++G S D++S
Sbjct: 172 NLFLNDDMDVKIGDFGLATKI--EFDGERKKTLCGTPNYIAPEVLCKKGH-SFEVDIWSL 228
Query: 63 GIMLMEAFTRKKPTD---------EMFSGEMTLKRWINDLLSVSVMEVVDANLLTR 109
G +L K P + + E ++ R IN + S + ++ A+ R
Sbjct: 229 GCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHADPTLR 284
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T T + T+ Y AP ST D++
Sbjct: 131 PQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 189 SLGCIFAEMVTRR----ALFPGD 207
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+L++ L DFG++ LI SM + + T YM+P E + S D++
Sbjct: 133 PSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP-ERLQGTHYSVQSDIW 187
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTL 86
S G+ L+E + P + E+ L
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG--- 57
P+N L+ D M+ L DFGIA + + S+ + + T+ YM P NG
Sbjct: 136 PANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 194
Query: 58 -------DVYSFGIMLMEAFTRKKPTDEMFS 81
DV+S G +L K P ++ +
Sbjct: 195 SKISPKSDVWSLGCILYYMTYGKTPFQQIIN 225
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 21/144 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+LL+ A L+DFG+A L D + + T +MAP E +E + D++S
Sbjct: 155 NILLNTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAP-EVIQEIGYNCVADIWSL 211
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
GI +E K P ++ N + E+ N
Sbjct: 212 GITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFT--------------- 256
Query: 123 FVFNLAMECTIESPERRINAKEIV 146
+ +C ++SPE+R A +++
Sbjct: 257 ---DFVKQCLVKSPEQRATATQLL 277
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T T + T+ Y AP ST D++
Sbjct: 130 PQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 188 SLGCIFAEMVTRR----ALFPGD 206
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T T + T+ Y AP ST D++
Sbjct: 130 PQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 188 SLGCIFAEMVTRR----ALFPGD 206
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 17/139 (12%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P NVLLD +M A ++DFG++ ++ D + + + Y AP D++
Sbjct: 139 PENVLLDAHMNAKIADFGLSNMM--SDGEFLR-DSCGSPNYAAPEVISGRLYAGPEVDIW 195
Query: 61 SFGIMLMEAFTRKKPTDE---------MFSGEMTLKRWINDLLSVSVMEVVDANLLTRED 111
S G++L P D+ + G + ++N ++ +M ++ + L R
Sbjct: 196 SCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRAT 255
Query: 112 -----RHFAAKQQCVSFVF 125
H KQ S++F
Sbjct: 256 IKDIREHEWFKQDLPSYLF 274
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+L++ L DFG++ LI SM + + T YM+P E + S D++
Sbjct: 133 PSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP-ERLQGTHYSVQSDIW 187
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTL 86
S G+ L+E + P + E+ L
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T T + T+ Y AP ST D++
Sbjct: 130 PQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 188 SLGCIFAEMVTRR----ALFPGD 206
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T T + T+ Y AP ST D++
Sbjct: 131 PQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 189 SLGCIFAEMVTRR----ALFPGD 207
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T T + T+ Y AP ST D++
Sbjct: 131 PQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 189 SLGCIFAEMVTRR----ALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T T + T+ Y AP ST D++
Sbjct: 130 PQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 188 SLGCIFAEMVTRR----ALFPGD 206
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+L++ L DFG++ LI SM + + T YM+P E + S D++
Sbjct: 195 PSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP-ERLQGTHYSVQSDIW 249
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTL 86
S G+ L+E + P + E+ L
Sbjct: 250 SMGLSLVEMAVGRYPIPPPDAKELEL 275
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T T + T+ Y AP ST D++
Sbjct: 131 PQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 189 SLGCIFAEMVTRR----ALFPGD 207
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG--- 57
P+N L+ D M+ L DFGIA + + S+ + + T+ YM P NG
Sbjct: 183 PANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 241
Query: 58 -------DVYSFGIMLMEAFTRKKPTDEMFS 81
DV+S G +L K P ++ +
Sbjct: 242 SKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T T + T+ Y AP ST D++
Sbjct: 135 PQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 192
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 193 SLGCIFAEMVTRR----ALFPGD 211
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 2 SNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
+NVLL + L+DFG+A L D + + + T +MAP E ++ D++S
Sbjct: 145 ANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAP-EVIKQSAYDFKADIWS 201
Query: 62 FGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDAN-LLTREDRHFAAKQQC 120
GI +E + P +DL + V+ ++ N T E +H ++
Sbjct: 202 LGITAIELAKGEPPN--------------SDLHPMRVLFLIPKNSPPTLEGQHSKPFKEF 247
Query: 121 VSFVFNLAMECTIESPERRINAKEIV 146
V C + P R AKE++
Sbjct: 248 VE-------ACLNKDPRFRPTAKELL 266
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + T+ +AT Y AP + + D+
Sbjct: 154 PSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDI 213
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 214 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 245
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T T + T+ Y AP ST D++
Sbjct: 138 PQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 195
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 196 SLGCIFAEMVTRR----ALFPGD 214
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T T + T+ Y AP ST D++
Sbjct: 132 PQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 190 SLGCIFAEMVTRR----ALFPGD 208
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 14/73 (19%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP-----VEYGREGRVST 55
PSN+ L D + DFG+ L + + + ++ T+ YM+P +YG+E
Sbjct: 150 PSNIFLVDTKQVKIGDFGLVTSLKNDGK---RXRSKGTLRYMSPEQISSQDYGKE----- 201
Query: 56 NGDVYSFGIMLME 68
D+Y+ G++L E
Sbjct: 202 -VDLYALGLILAE 213
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG--- 57
P+N L+ D M+ L DFGIA + + S+ + + T+ YM P NG
Sbjct: 183 PANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 241
Query: 58 -------DVYSFGIMLMEAFTRKKPTDEMFS 81
DV+S G +L K P ++ +
Sbjct: 242 SKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 21/150 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+L+ L DFG+++ + ED L I +M+P E R +T DV+ F
Sbjct: 155 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSP-ESINFRRFTTASDVWMF 212
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
+ + E + K F W+ + + V+E + DR C
Sbjct: 213 AVCMWEILSFGK--QPFF--------WLENKDVIGVLE--------KGDR-LPKPDLCPP 253
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
++ L C P R E+V LS +
Sbjct: 254 VLYTLMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 21/150 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+L+ L DFG+++ + ED L I +M+P E R +T DV+ F
Sbjct: 139 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSP-ESINFRRFTTASDVWMF 196
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
+ + E + K F W+ + + V+E + DR C
Sbjct: 197 AVCMWEILSFGK--QPFF--------WLENKDVIGVLE--------KGDR-LPKPDLCPP 237
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
++ L C P R E+V LS +
Sbjct: 238 VLYTLMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 33.9 bits (76), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 21/150 (14%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N+L+ L DFG+++ + ED L I +M+P E R +T DV+ F
Sbjct: 143 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSP-ESINFRRFTTASDVWMF 200
Query: 63 GIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHFAAKQQCVS 122
+ + E + K F W+ + + V+E + DR C
Sbjct: 201 AVCMWEILSFGK--QPFF--------WLENKDVIGVLE--------KGDR-LPKPDLCPP 241
Query: 123 FVFNLAMECTIESPERRINAKEIVTELSKI 152
++ L C P R E+V LS +
Sbjct: 242 VLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 33.5 bits (75), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD N ++DFG AK + + T Y+AP E + + D +
Sbjct: 134 PENILLDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDYIAP-EVVSTKPYNKSIDWW 187
Query: 61 SFGIMLMEAFTRKKP 75
SFGI++ E P
Sbjct: 188 SFGILIYEMLAGYTP 202
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 33.5 bits (75), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP----VEYGREGRVSTN 56
PSNVL++ + DFGI+ L+ + + + YMAP E ++G S
Sbjct: 138 PSNVLINALGQVKMCDFGISGYLVDD---VAKDIDAGCKPYMAPERINPELNQKG-YSVK 193
Query: 57 GDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWIND 92
D++S GI ++E + P D + LK+ + +
Sbjct: 194 SDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 229
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 33.5 bits (75), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L+ + V L DFG A+LL G S +AT Y +P + + DV+
Sbjct: 130 PENILITKHSVIKLCDFGFARLLTGP--SDYYDDEVATRWYRSPELLVGDTQYGPPVDVW 187
Query: 61 SFGIMLMEAFT 71
+ G + E +
Sbjct: 188 AIGCVFAELLS 198
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 27/155 (17%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMT-QTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVL++ + DFG+ K + + + T + + + + AP E + + DV+S
Sbjct: 144 NVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP-ECLMQSKFYIASDVWS 202
Query: 62 FGIMLMEAFTRKKPTDEMFS----------GEMTLKRWINDLLSVSVMEVVDANLLTRED 111
FG+ L E T + G+MT+ R +N L +E
Sbjct: 203 FGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL---------------KEG 247
Query: 112 RHFAAKQQCVSFVFNLAMECTIESPERRINAKEIV 146
+ C V+ L +C P R + + ++
Sbjct: 248 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 282
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 33.5 bits (75), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 27/155 (17%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMT-QTQTLATIGYMAPVEYGREGRVSTNGDVYS 61
NVL++ + DFG+ K + + + T + + + + AP E + + DV+S
Sbjct: 156 NVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP-ECLMQSKFYIASDVWS 214
Query: 62 FGIMLMEAFTRKKPTDEMFS----------GEMTLKRWINDLLSVSVMEVVDANLLTRED 111
FG+ L E T + G+MT+ R +N L +E
Sbjct: 215 FGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL---------------KEG 259
Query: 112 RHFAAKQQCVSFVFNLAMECTIESPERRINAKEIV 146
+ C V+ L +C P R + + ++
Sbjct: 260 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 294
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 33.5 bits (75), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDVY 60
NV+LD ++DFG+ K I + +T T Y+AP + Y G+ + D +
Sbjct: 472 NVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAPEIIAYQPYGK---SVDWW 526
Query: 61 SFGIMLMEAFTRKKP-----TDEMFSGEM 84
+FG++L E + P DE+F M
Sbjct: 527 AFGVLLYEMLAGQAPFEGEDEDELFQSIM 555
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 33.1 bits (74), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + + +AT Y AP + + D+
Sbjct: 156 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDI 215
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 216 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 247
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 33.1 bits (74), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLL-IGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
PSN+LL+ + DFG+A++ D + + +AT Y AP + + D+
Sbjct: 157 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDI 216
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G +L E + + +F G+ L + +N +L +
Sbjct: 217 WSVGCILAEMLSNRP----IFPGKHYLDQ-LNHILGI 248
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 33.1 bits (74), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG--- 57
P+N L+ D M+ L DFGIA + + + + + T+ YM P NG
Sbjct: 155 PANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 213
Query: 58 -------DVYSFGIMLMEAFTRKKPTDEMFS 81
DV+S G +L K P ++ +
Sbjct: 214 SKISPKSDVWSLGCILYYMTYGKTPFQQIIN 244
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 33.1 bits (74), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLI--GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGD 58
PSN+L+++N + DFG+A+ L + T+ +AT Y AP + D
Sbjct: 187 PSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAID 246
Query: 59 VYSFGIMLMEAFTRKKPTDEMFSGE 83
++S G + E R+ ++F G+
Sbjct: 247 LWSVGCIFGEMLARR----QLFPGK 267
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 33.1 bits (74), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 44
P N+LLDD+M L+DFG + L D + T Y+AP
Sbjct: 139 PENILLDDDMNIKLTDFGFSCQL---DPGEKLREVCGTPSYLAP 179
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 33.1 bits (74), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDVY 60
NV+LD ++DFG+ K I + +T T Y+AP + Y G+ + D +
Sbjct: 151 NVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAPEIIAYQPYGK---SVDWW 205
Query: 61 SFGIMLMEAFTRKKP-----TDEMFSGEM 84
+FG++L E + P DE+F M
Sbjct: 206 AFGVLLYEMLAGQAPFEGEDEDELFQSIM 234
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLI--GEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGD 58
PSN+L+++N + DFG+A+ L + T+ +AT Y AP + D
Sbjct: 186 PSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAID 245
Query: 59 VYSFGIMLMEAFTRKKPTDEMFSGE 83
++S G + E R+ ++F G+
Sbjct: 246 LWSVGCIFGEMLARR----QLFPGK 266
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDVY 60
N+LL + + L DFG A ++ + T +MAP + EG+ DV+
Sbjct: 145 NILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDEGQYDGKVDVW 198
Query: 61 SFGIMLMEAFTRKKP 75
S GI +E RK P
Sbjct: 199 SLGITCIELAERKPP 213
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 44
P N+LLDD+M L+DFG + L D + T Y+AP
Sbjct: 152 PENILLDDDMNIKLTDFGFSCQL---DPGEKLREVCGTPSYLAP 192
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 1 PSNVLLDD-NMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
P N+LLD + V L DFG AK+LI + +++ + + Y AP +TN D+
Sbjct: 169 PQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS---XICSRYYRAPELIFGATNYTTNIDI 225
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGE 83
+S G ++ E + +P +F GE
Sbjct: 226 WSTGCVMAE-LMQGQP---LFPGE 245
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDVY 60
N+LL + + L DFG A ++ + T +MAP + EG+ DV+
Sbjct: 184 NILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDEGQYDGKVDVW 237
Query: 61 SFGIMLMEAFTRKKP 75
S GI +E RK P
Sbjct: 238 SLGITCIELAERKPP 252
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 16/105 (15%)
Query: 1 PSNVLL---DDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG 57
P N+L +DN+ + DFG A+L ++Q + T+ Y AP + G +
Sbjct: 134 PENLLFTDENDNLEIKIIDFGFARLKPPDNQPL--KTPCFTLHYAAPELLNQNG-YDESC 190
Query: 58 DVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVV 102
D++S G++L M SG++ + L S +E++
Sbjct: 191 DLWSLGVILY----------TMLSGQVPFQSHDRSLTCTSAVEIM 225
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 130 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 188 SLGCIFAEMVTRR----ALFPGD 206
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 131 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 189 SLGCIFAEMVTRR----ALFPGD 207
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 131 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 189 SLGCIFAEMVTRR----ALFPGD 207
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 131 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 189 SLGCIFAEMVTRR----ALFPGD 207
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 133 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 191 SLGCIFAEMVTRR----ALFPGD 209
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 130 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 188 SLGCIFAEMVTRR----ALFPGD 206
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 132 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 190 SLGCIFAEMVTRR----ALFPGD 208
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 133 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 191 SLGCIFAEMVTRR----ALFPGD 209
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 134 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 192 SLGCIFAEMVTRR----ALFPGD 210
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 131 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 189 SLGCIFAEMVTRR----ALFPGD 207
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 134 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 192 SLGCIFAEMVTRR----ALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 133 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 191 SLGCIFAEMVTRR----ALFPGD 209
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 132 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 190 SLGCIFAEMVTRR----ALFPGD 208
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 134 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 192 SLGCIFAEMVTRR----ALFPGD 210
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 131 PENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 189 SLGCIFAEMVTRR----ALFPGD 207
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 132 PENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 190 SLGCIFAEMVTRR----ALFPGD 208
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG--- 57
P+N L+ D M+ L DFGIA + + S+ + + + YM P NG
Sbjct: 183 PANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSK 241
Query: 58 -------DVYSFGIMLMEAFTRKKPTDEMFS 81
DV+S G +L K P ++ +
Sbjct: 242 SKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 135 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 192
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 193 SLGCIFAEMVTRR----ALFPGD 211
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 132 PENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 190 SLGCIFAEMVTRR----ALFPGD 208
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 25/120 (20%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP------VEYGREGRVS 54
P N+L+ + V L DFG A+ L + +AT Y AP V+YG+
Sbjct: 152 PENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGKA---- 205
Query: 55 TNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANLLTREDRHF 114
DV++ G ++ E F + +F G+ + + + ++ + NL+ R F
Sbjct: 206 --VDVWAIGCLVTEMFM----GEPLFPGDSDIDQLYHIMMCL-------GNLIPRHQELF 252
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 134 PENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 192 SLGCIFAEMVTRR----ALFPGD 210
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 134 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 192 SLGCIFAEMVTRR----ALFPGD 210
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 133 PENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 191 SLGCIFAEMVTRR----ALFPGD 209
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L+DFG+A+ T + T+ Y AP ST D++
Sbjct: 134 PQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 61 SFGIMLMEAFTRKKPTDEMFSGE 83
S G + E TR+ +F G+
Sbjct: 192 SLGCIFAEMVTRR----ALFPGD 210
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGE------DQSMTQTQTLATIGYMAPVEYGREGRVSTN 56
NVL+ ++ +SDFG++ L G ++ + TI YMAP EG V+
Sbjct: 150 NVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVL--EGAVNLR 207
Query: 57 G--------DVYSFGIMLMEAFTRKKPTDEMFSGE 83
D+Y+ G++ E F R ++F GE
Sbjct: 208 DXESALKQVDMYALGLIYWEIFMR---CTDLFPGE 239
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P NVLLD +M A ++DFG++ ++ D + + + Y AP D++
Sbjct: 144 PENVLLDAHMNAKIADFGLSNMM--SDGEFLRX-SCGSPNYAAPEVISGRLYAGPEVDIW 200
Query: 61 SFGIMLMEAFTRKKPTDE 78
S G++L P D+
Sbjct: 201 SSGVILYALLCGTLPFDD 218
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG--- 57
PSN+L+ ++ ++DFG++ G D + + T+ T +MAP E E R +G
Sbjct: 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALL--SNTVGTPAFMAP-ESLSETRKIFSGKAL 221
Query: 58 DVYSFGIML 66
DV++ G+ L
Sbjct: 222 DVWAMGVTL 230
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
N +L D+M ++DFG++K + D + ++A +E + ++ DV++F
Sbjct: 177 NCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA-IESLADRVYTSKSDVWAF 235
Query: 63 GIMLMEAFTR 72
G+ + E TR
Sbjct: 236 GVTMWEIATR 245
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 44
P N+LLDD+M L+DFG + L D T Y+AP
Sbjct: 152 PENILLDDDMNIKLTDFGFSCQL---DPGEKLRSVCGTPSYLAP 192
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 PSNVL---LDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG 57
P N+L LD++ +SDFG++K+ ED + T GY+AP E + S
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP-EVLAQKPYSKAV 199
Query: 58 DVYSFGIM 65
D +S G++
Sbjct: 200 DCWSIGVI 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 PSNVL---LDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG 57
P N+L LD++ +SDFG++K+ ED + T GY+AP E + S
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP-EVLAQKPYSKAV 199
Query: 58 DVYSFGIM 65
D +S G++
Sbjct: 200 DCWSIGVI 207
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 3 NVLLDDNMVAHLSDFGIAKL-LIGEDQSMTQTQTLATIGYMAP-VEYGREGRVSTNGDVY 60
N+LLD + ++DFG+ K ++G+ ++ + T Y+AP + G++ S D +
Sbjct: 149 NILLDKDGHIKIADFGMCKENMLGDAKT---NEFCGTPDYIAPEILLGQKYNHSV--DWW 203
Query: 61 SFGIMLMEAFTRKKP 75
SFG++L E + P
Sbjct: 204 SFGVLLYEMLIGQSP 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 PSNVL---LDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG 57
P N+L LD++ +SDFG++K+ ED + T GY+AP E + S
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP-EVLAQKPYSKAV 199
Query: 58 DVYSFGIM 65
D +S G++
Sbjct: 200 DCWSIGVI 207
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 1 PSNVL---LDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG 57
P N+L LD++ +SDFG++K+ ED + T GY+AP E + S
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP-EVLAQKPYSKAV 199
Query: 58 DVYSFGIM 65
D +S G++
Sbjct: 200 DCWSIGVI 207
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP--VEYGREGRVSTNGDVY 60
NV+LD ++DFG+ K + + +T + T Y+AP + Y G+ + D +
Sbjct: 150 NVMLDSEGHIKIADFGMCKEHMMD--GVTTREFCGTPDYIAPEIIAYQPYGK---SVDWW 204
Query: 61 SFGIMLMEAFTRKKPTD 77
++G++L E + P D
Sbjct: 205 AYGVLLYEMLAGQPPFD 221
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 2 SNVLLDDNMVAHLSDFGIA-KLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
SN+LL NM ++DFG+A +L + ++ T T Y++P E DV+
Sbjct: 141 SNLLLTRNMNIKIADFGLATQLKMPHEKHYT---LCGTPNYISP-EIATRSAHGLESDVW 196
Query: 61 SFGIMLMEAFTRKKPTD 77
S G M + P D
Sbjct: 197 SLGCMFYTLLIGRPPFD 213
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 12/99 (12%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVLLD L+DFG+ K G +T T Y+AP E +E D ++
Sbjct: 154 NVLLDHEGHCKLADFGMCKE--GICNGVTTATFCGTPDYIAP-EILQEMLYGPAVDWWAM 210
Query: 63 GIMLMEAFTRKKP-----TDEMFSG----EMTLKRWIND 92
G++L E P D++F E+ W+++
Sbjct: 211 GVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAP---VEYGREGRVSTN 56
P N+LLD + L+DFG + ++ M T + T Y++P G +G
Sbjct: 202 PDNMLLDKHGHLKLADFGTCMKM--DETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRE 259
Query: 57 GDVYSFGIMLMEAFTRKKP 75
D +S G+ L E P
Sbjct: 260 CDWWSVGVFLFEMLVGDTP 278
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 3 NVLLDDNMVAHLSDFGIAKL-LIGEDQSMTQTQTLATIGYMAP-VEYGREGRVSTNGDVY 60
N+LLD + ++DFG+ K ++G+ ++ T Y+AP + G++ S D +
Sbjct: 148 NILLDKDGHIKIADFGMCKENMLGDAKT---NXFCGTPDYIAPEILLGQKYNHSV--DWW 202
Query: 61 SFGIMLMEAFTRKKP 75
SFG++L E + P
Sbjct: 203 SFGVLLYEMLIGQSP 217
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Query: 1 PSNVLLDDNMVAHLSDFGIAK-------LLIGEDQSM-----TQTQTLATIGYMAPVEYG 48
P N+ +D++ + DFG+AK +L + Q++ T + T Y+A
Sbjct: 144 PXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLD 203
Query: 49 REGRVSTNGDVYSFGIMLME 68
G + D YS GI+ E
Sbjct: 204 GTGHYNEKIDXYSLGIIFFE 223
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 39/170 (22%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIG---------------YMAP-VE 46
N L+ +N ++DFG+A+L++ E TQ + L ++ +MAP +
Sbjct: 138 NCLVRENKNVVVADFGLARLMVDEK---TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI 194
Query: 47 YGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVMEVVDANL 106
GR DV+SFGI+L E R + M + L
Sbjct: 195 NGRS--YDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL------------ 240
Query: 107 LTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDSL 156
DR+ C F + + C PE+R + ++ L +R L
Sbjct: 241 ----DRY--CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP---VEYGREGRVSTNG 57
P N+LLD + L+DFG + E T + T Y++P G +G
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGYYGREC 259
Query: 58 DVYSFGIMLMEAFTRKKP 75
D +S G+ L E P
Sbjct: 260 DWWSVGVFLYEMLVGDTP 277
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP---VEYGREGRVSTNG 57
P N+LLD + L+DFG + E T + T Y++P G +G
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGYYGREC 259
Query: 58 DVYSFGIMLMEAFTRKKP 75
D +S G+ L E P
Sbjct: 260 DWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP---VEYGREGRVSTNG 57
P N+LLD + L+DFG + E T + T Y++P G +G
Sbjct: 196 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGYYGREC 254
Query: 58 DVYSFGIMLMEAFTRKKP 75
D +S G+ L E P
Sbjct: 255 DWWSVGVFLYEMLVGDTP 272
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 30.0 bits (66), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L+D ++DFG AK + G + T Y+AP +G + D +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPAIILSKG-YNKAVDWW 222
Query: 61 SFGIMLME 68
+ G+++ E
Sbjct: 223 ALGVLIYE 230
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVLLD L+D+G+ K G T + T Y+AP E R + D ++
Sbjct: 151 NVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAP-EILRGEDYGFSVDWWAL 207
Query: 63 GIMLMEAFTRKKPTD 77
G+++ E + P D
Sbjct: 208 GVLMFEMMAGRSPFD 222
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVLLD L+D+G+ K G T + T Y+AP E R + D ++
Sbjct: 136 NVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAP-EILRGEDYGFSVDWWAL 192
Query: 63 GIMLMEAFTRKKPTD 77
G+++ E + P D
Sbjct: 193 GVLMFEMMAGRSPFD 207
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 12/80 (15%)
Query: 1 PSNVLLDDNMVAHLSDFGIAK-------LLIGEDQSM-----TQTQTLATIGYMAPVEYG 48
P N+ +D++ + DFG+AK +L + Q++ T + T Y+A
Sbjct: 144 PMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD 203
Query: 49 REGRVSTNGDVYSFGIMLME 68
G + D+YS GI+ E
Sbjct: 204 GTGHYNEKIDMYSLGIIFFE 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAPVEYGREGRVSTNGDV 59
P N+L+D ++DFG AK + G +T TL T Y+AP +G + D
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEIILSKG-YNKAVDW 222
Query: 60 YSFGIMLME 68
++ G+++ E
Sbjct: 223 WALGVLIYE 231
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 29.6 bits (65), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTL-ATIGYMAPVEYGREGRVSTNGDV 59
P N+L+D ++DFG AK + G +T TL T Y+AP +G + D
Sbjct: 155 PENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEIILSKG-YNKAVDW 207
Query: 60 YSFGIMLME 68
++ G+++ E
Sbjct: 208 WALGVLIYE 216
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 29.6 bits (65), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVLLD L+D+G+ K G T + T Y+AP E R + D ++
Sbjct: 140 NVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAP-EILRGEDYGFSVDWWAL 196
Query: 63 GIMLMEAFTRKKPTD 77
G+++ E + P D
Sbjct: 197 GVLMFEMMAGRSPFD 211
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 12/80 (15%)
Query: 1 PSNVLLDDNMVAHLSDFGIAK-------LLIGEDQSM-----TQTQTLATIGYMAPVEYG 48
P N+ +D++ + DFG+AK +L + Q++ T + T Y+A
Sbjct: 144 PMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD 203
Query: 49 REGRVSTNGDVYSFGIMLME 68
G + D+YS GI+ E
Sbjct: 204 GTGHYNEKIDMYSLGIIFFE 223
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ L DFG+A+ T + + T+ Y AP ST+ D++
Sbjct: 136 PQNLLINKRGQLKLGDFGLARAF--GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIW 193
Query: 61 SFGIMLMEAFTRK 73
S G +L E T K
Sbjct: 194 SCGCILAEMITGK 206
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L+D+ ++DFG AK + G + T Y+AP +G + D +
Sbjct: 156 PENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEIILSKG-YNKAVDWW 209
Query: 61 SFGIMLME 68
+ G+++ E
Sbjct: 210 ALGVLIYE 217
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSF 62
NVLLD L+D+G+ K G T + T Y+AP E R + D ++
Sbjct: 183 NVLLDSEGHIKLTDYGMCKE--GLRPGDTTSTFCGTPNYIAP-EILRGEDYGFSVDWWAL 239
Query: 63 GIMLMEAFTRKKPTD 77
G+++ E + P D
Sbjct: 240 GVLMFEMMAGRSPFD 254
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIG---YMAPVEYGREGRVSTNGDV 59
N+ L + L DFGIA++L + T A IG Y++P E + D+
Sbjct: 155 NIFLTKDGTVQLGDFGIARVL-----NSTVELARACIGTPYYLSP-EICENKPYNNKSDI 208
Query: 60 YSFGIMLMEAFTRK 73
++ G +L E T K
Sbjct: 209 WALGCVLYELCTLK 222
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP----VEYGREGRVSTN 56
PSNVL++ DFGI+ L+ + + + Y AP E ++G S
Sbjct: 165 PSNVLINALGQVKXCDFGISGYLVDD---VAKDIDAGCKPYXAPERINPELNQKG-YSVK 220
Query: 57 GDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWIND 92
D++S GI +E + P D + LK+ + +
Sbjct: 221 SDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEE 256
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 29.3 bits (64), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKL--LIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
+NVL+ + V L+DFG+A+ L Q + T+ Y P E D+
Sbjct: 153 ANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDL 212
Query: 60 YSFGIMLMEAFTR 72
+ G ++ E +TR
Sbjct: 213 WGAGCIMAEMWTR 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKL--LIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
+NVL+ + V L+DFG+A+ L Q + T+ Y P E D+
Sbjct: 154 ANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDL 213
Query: 60 YSFGIMLMEAFTR 72
+ G ++ E +TR
Sbjct: 214 WGAGCIMAEMWTR 226
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKL--LIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
+NVL+ + V L+DFG+A+ L Q + T+ Y P E D+
Sbjct: 154 ANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDL 213
Query: 60 YSFGIMLMEAFTR 72
+ G ++ E +TR
Sbjct: 214 WGAGCIMAEMWTR 226
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
P N+LL DN + DF +A+ ED + +T + Y AP + + D+
Sbjct: 162 PGNILLADNNDITICDFNLAR----EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDM 217
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G ++ E F RK +F G T +N ++ V
Sbjct: 218 WSAGCVMAEMFNRKA----LFRGS-TFYNQLNKIVEV 249
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 29.3 bits (64), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 2 SNVLLDDNMVAHLSDFGIAKL--LIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
+NVL+ + V L+DFG+A+ L Q + T+ Y P E D+
Sbjct: 154 ANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDL 213
Query: 60 YSFGIMLMEAFTR 72
+ G ++ E +TR
Sbjct: 214 WGAGCIMAEMWTR 226
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAPVEYGREGRVSTNGDV 59
P N+LL DN + DF +A+ ED + +T + Y AP + + D+
Sbjct: 162 PGNILLADNNDITICDFNLAR----EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDM 217
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDLLSV 96
+S G ++ E F RK +F G T +N ++ V
Sbjct: 218 WSAGCVMAEMFNRKA----LFRGS-TFYNQLNKIVEV 249
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLA-TIGYMAPVEYGREGRVSTNGDV 59
P N+L+D ++DFG AK + G +T LA T Y+AP +G + D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKG------RTWXLAGTPEYLAPEIILSKG-YNKAVDW 221
Query: 60 YSFGIMLME 68
++ G+++ E
Sbjct: 222 WALGVLIYE 230
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 28/171 (16%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGE--DQSMTQTQTLATIGYMAPVEYGREG------RVS 54
N+L+ N ++D G+A I + + + + T YM P E E +
Sbjct: 172 NILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP-EVLDESLNRNHFQSY 230
Query: 55 TNGDVYSFGIMLMEAFTR----------KKPTDEMFSGEMTLKRWINDLLSVSVMEVVDA 104
D+YSFG++L E R + P ++ + + + D+ + ++ +
Sbjct: 231 IMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYE----DMREIVCIKKLRP 286
Query: 105 NLLTREDRHFAAKQQCVSFVFNLAMECTIESPERRINAKEIVTELSKIRDS 155
+ R + +C+ + L EC +P R+ A + L+K+ +S
Sbjct: 287 SFPNR-----WSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L+D ++DFG AK + G ++ T Y+AP +G + D +
Sbjct: 190 PENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPE-----YLAPEIILSKG-YNKAVDWW 243
Query: 61 SFGIMLME 68
+ G+++ E
Sbjct: 244 ALGVLIYE 251
>pdb|3C3W|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Hypoxic Response Regulator Dosr
pdb|3C3W|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Hypoxic Response Regulator Dosr
Length = 225
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 65 MLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVME 100
+L E T K+ D MF E T+K +++ LL+ ME
Sbjct: 160 LLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGME 195
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNG-DV 59
P N+LL N ++DFG + S +T T+ Y+ P EGR+ D+
Sbjct: 140 PENLLLGSNGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDL 193
Query: 60 YSFGIMLMEAFTRKKPTDEMFSGEMTLKR 88
+S G++ E F P E + + T +R
Sbjct: 194 WSLGVLCYE-FLVGMPPFEAHTYQETYRR 221
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 14 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVYSFGIMLMEAFTRK 73
+ D G+A L ++ + T + AP Y E + + DVY+FG +E T +
Sbjct: 173 IGDLGLATL----KRASFAKAVIGTPEFXAPEXY--EEKYDESVDVYAFGXCXLEXATSE 226
Query: 74 KPTDEMFSGEMTLKRWINDLLSVS--------VMEVVDANLLTREDRHFAAK 117
P E + +R + + S V E+++ + +D ++ K
Sbjct: 227 YPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIK 278
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ ++DFG+A+ T + T+ Y AP + ST D++
Sbjct: 128 PQNLLINREGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 61 SFGIMLME 68
S G + E
Sbjct: 186 SVGCIFAE 193
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 23/107 (21%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIG-------------------EDQSMTQTQTLATIGY 41
PSN+LL+ ++DFG+++ + +D T +AT Y
Sbjct: 137 PSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWY 196
Query: 42 MAPVEYGREGRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKR 88
AP + + D++S G +L E K +F G T+ +
Sbjct: 197 RAPEILLGSTKYTKGIDMWSLGCILGEILCGK----PIFPGSSTMNQ 239
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMT----------QTQTLATIGYMAPVEYGRE 50
PSN+ + V + DFG+ + +++ T T + T YM+P E
Sbjct: 146 PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSP-EQIHG 204
Query: 51 GRVSTNGDVYSFGIMLME 68
S D++S G++L E
Sbjct: 205 NSYSHKVDIFSLGLILFE 222
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 3 NVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAP----VEYGREGRVSTNG 57
NVLL +N L DFG++ L D+++ + T + T +MAP + +
Sbjct: 159 NVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKS 215
Query: 58 DVYSFGIMLMEAFTRKKPTDEM 79
D++S GI +E P +M
Sbjct: 216 DLWSLGITAIEMAEGAPPLCDM 237
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 148 PSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 203
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 204 SVGCIMGEMVRHKI----LFPGRDYIDQW 228
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 147 PSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 202
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 203 SVGCIMGEMVRHKI----LFPGRDYIDQW 227
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ ++DFG+A+ T + T+ Y AP + ST D++
Sbjct: 128 PQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 61 SFGIMLME 68
S G + E
Sbjct: 186 SVGCIFAE 193
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 154 PSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 209
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 210 SVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 148 PSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 203
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 204 SVGCIMGEMVRHKI----LFPGRDYIDQW 228
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+L++ ++DFG+A+ T + T+ Y AP + ST D++
Sbjct: 128 PQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 61 SFGIMLME 68
S G + E
Sbjct: 186 SVGCIFAE 193
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 155 PSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 210
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 211 SVGCIMGEMVRHKI----LFPGRDYIDQW 235
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 153 PSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 208
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 209 SVGCIMGEMVRHKI----LFPGRDYIDQW 233
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 154 PSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 209
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 210 SVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 154 PSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 209
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 210 SVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 155 PSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 210
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 211 SVGCIMGEMVRHKI----LFPGRDYIDQW 235
>pdb|1ZLK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Hypoxic Response Regulator Dosr C-Terminal Domain-Dna
Complex
pdb|1ZLK|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Hypoxic Response Regulator Dosr C-Terminal Domain-Dna
Complex
pdb|3C57|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Hypoxic Response Regulator Dosr C-Terminal Domain
Crystal Form Ii
pdb|3C57|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Hypoxic Response Regulator Dosr C-Terminal Domain
Crystal Form Ii
Length = 95
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 65 MLMEAFTRKKPTDEMFSGEMTLKRWINDLLSVSVME 100
+L E T K+ D MF E T+K +++ LL+ ME
Sbjct: 38 LLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGME 73
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 154 PSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 209
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 210 SVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 192 PSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 247
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 248 SVGCIMGEMVRHKI----LFPGRDYIDQW 272
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 192 PSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 247
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 248 SVGCIMGEMVRHKI----LFPGRDYIDQW 272
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 148 PSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDLW 203
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 204 SVGCIMGEMVCHKI----LFPGRDYIDQW 228
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 154 PSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 209
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 210 SVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 147 PSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 202
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 203 SVGCIMGEMVRHKI----LFPGRDYIDQW 227
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
P N+LLD L+DFG+ K I E S T T T Y+AP E + D +
Sbjct: 167 PENILLDSQGHIVLTDFGLCKENI-EHNSTTST-FCGTPEYLAP-EVLHKQPYDRTVDWW 223
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEM 84
G +L E P + EM
Sbjct: 224 CLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 159 PSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDLW 214
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 215 SVGCIMGEMVCHKI----LFPGRDYIDQW 239
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 154 PSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 209
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G ++ E K +F G + +W
Sbjct: 210 SVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSNV ++++ + DFG+A+ D+ M T +AT Y AP + D++
Sbjct: 151 PSNVAVNEDCELRILDFGLAR---QADEEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 205
Query: 61 SFGIMLMEAFTRK 73
S G ++ E K
Sbjct: 206 SVGCIMAELLQGK 218
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 18/103 (17%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSM----------TQTQTLATIGYMAPVEYGRE 50
PSN+ + V + DFG+ + +++ T + T YM+P E
Sbjct: 192 PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSP-EQIHG 250
Query: 51 GRVSTNGDVYSFGIMLMEAFTRKKPTDEMFSGEMTLKRWINDL 93
S D++S G++L E FS +M R I D+
Sbjct: 251 NNYSHKVDIFSLGLILFELLYS-------FSTQMERVRIITDV 286
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSNV ++++ + DFG+A+ D+ M T +AT Y AP + D++
Sbjct: 159 PSNVAVNEDSELRILDFGLAR---QADEEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 61 SFGIMLMEAFTRK 73
S G ++ E K
Sbjct: 214 SVGCIMAELLQGK 226
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 153 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNAMHYNQTVDIW 207
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 208 SVGCIMAELLT 218
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 153 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGXVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 208 SVGCIMAELLT 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSNV ++++ + DFG+A+ D+ M T +AT Y AP + D++
Sbjct: 159 PSNVAVNEDSELRILDFGLAR---QADEEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 61 SFGIMLMEAFTRK 73
S G ++ E K
Sbjct: 214 SVGCIMAELLQGK 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ E T +AT Y AP + D++
Sbjct: 160 PSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 215 SVGCIMAELLT 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ E T +AT Y AP + D++
Sbjct: 160 PSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 215 SVGCIMAELLT 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 153 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 208 SVGCIMAELLT 218
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 158 PSNLAVNEDXELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 213 SVGCIMAELLT 223
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ E T +AT Y AP + D++
Sbjct: 160 PSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 215 SVGCIMAELLT 225
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 158 PSNLAVNEDXELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 213 SVGCIMAELLT 223
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 153 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 208 SVGCIMAELLT 218
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 153 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 208 SVGCIMAELLT 218
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 158 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 213 SVGCIMAELLT 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 152 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 206
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 207 SVGCIMAELLT 217
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 153 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 208 SVGCIMAELLT 218
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 153 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 208 SVGCIMAELLT 218
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 153 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 208 SVGCIMAELLT 218
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 163 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 217
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 218 SVGCIMAELLT 228
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 160 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 215 SVGCIMAELLT 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 149 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 204 SVGCIMAELLT 214
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 158 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 213 SVGCIMAELLT 223
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 150 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 204
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 205 SVGCIMAELLT 215
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 149 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 204 SVGCIMAELLT 214
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 153 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 208 SVGCIMAELLT 218
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 153 PSNLAVNEDXELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 208 SVGCIMAELLT 218
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 150 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 204
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 205 SVGCIMAELLT 215
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 164 PSNLAVNEDXELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 218
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 219 SVGCIMAELLT 229
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 149 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 204 SVGCIMAELLT 214
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 153 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 208 SVGCIMAELLT 218
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 151 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 205
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 206 SVGCIMAELLT 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 153 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 208 SVGCIMAELLT 218
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 159 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 214 SVGCIMAELLT 224
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 155 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 210 SVGCIMAELLT 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 164 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 218
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 219 SVGCIMAELLT 229
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 155 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 210 SVGCIMAELLT 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 159 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 214 SVGCIMAELLT 224
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 118 QQCVSFVFNLAMECTI-ESPERRINAKEIVTELSKIRDSL 156
+ C + + N A +C E +R+NA+ LSK+ SL
Sbjct: 146 EDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSL 185
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 155 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 210 SVGCIMAELLT 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 159 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 214 SVGCIMAELLT 224
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 118 QQCVSFVFNLAMECTI-ESPERRINAKEIVTELSKIRDSL 156
+ C + + N A +C E +R+NA+ LSK+ SL
Sbjct: 155 EDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSL 194
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 26.6 bits (57), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 118 QQCVSFVFNLAMECTI-ESPERRINAKEIVTELSKIRDSL 156
+ C + + N A +C E +R+NA+ LSK+ SL
Sbjct: 140 EDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSL 179
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 26.6 bits (57), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 176 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 230
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 231 SVGCIMAELLT 241
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 26.6 bits (57), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 165 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 219
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 220 SVGCIMAELLT 230
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 26.6 bits (57), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 165 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 219
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 220 SVGCIMAELLT 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 26.6 bits (57), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 165 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 219
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 220 SVGCIMAELLT 230
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 26.6 bits (57), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 173 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 227
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 228 SVGCIMAELLT 238
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 26.6 bits (57), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 172 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 226
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 227 SVGCIMAELLT 237
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 173 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 227
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 228 SVGCIMAELLT 238
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 172 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 226
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 227 SVGCIMAELLT 237
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 26.2 bits (56), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 182 PSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNMTVDIW 236
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 237 SVGCIMAELLT 247
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 26.2 bits (56), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 154 PSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 209
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G+++ E +F G + +W
Sbjct: 210 SVGVIMGEMIK----GGVLFPGTDHIDQW 234
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 26.2 bits (56), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 155 PSNLAVNEDSELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 210 SVGCIMAELLT 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 26.2 bits (56), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+ ++++ + DFG+A+ D M T +AT Y AP + D++
Sbjct: 159 PSNLAVNEDSELKILDFGLAR---HTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 61 SFGIMLMEAFT 71
S G ++ E T
Sbjct: 214 SVGCIMAELLT 224
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 26.2 bits (56), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 1 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPVEYGREGRVSTNGDVY 60
PSN+++ + + DFG+A+ S T + T Y AP G N D++
Sbjct: 154 PSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIW 209
Query: 61 SFGIMLMEAFTRKKPTDEMFSGEMTLKRW 89
S G+++ E +F G + +W
Sbjct: 210 SVGVIMGEMIK----GGVLFPGTDHIDQW 234
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,225,878
Number of Sequences: 62578
Number of extensions: 148538
Number of successful extensions: 1345
Number of sequences better than 100.0: 677
Number of HSP's better than 100.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 431
Number of HSP's that attempted gapping in prelim test: 802
Number of HSP's gapped (non-prelim): 693
length of query: 164
length of database: 14,973,337
effective HSP length: 91
effective length of query: 73
effective length of database: 9,278,739
effective search space: 677347947
effective search space used: 677347947
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)