BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039457
(260 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y305|ACOT9_HUMAN Acyl-coenzyme A thioesterase 9, mitochondrial OS=Homo sapiens
GN=ACOT9 PE=1 SV=2
Length = 439
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 6/127 (4%)
Query: 124 PPSKSRTS---ILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGA 180
PP + + S +L S+ L+E+Y N +R G++LEDLD+L I Y H
Sbjct: 79 PPRRMKDSYIEVLLPLGSEPELREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAK 138
Query: 181 TRPILLVTASVDRM-VVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQ--STQGTPYES 237
P+ +VTA VD++ + KK + + D++ +G V+WVG++SME+++++ Q + P
Sbjct: 139 MSPLSIVTALVDKIDMCKKSLSPEQDIKFSGHVSWVGKTSMEVKMQMFQLHGDEFCPVLD 198
Query: 238 RVFVFLA 244
FV +A
Sbjct: 199 ATFVMVA 205
>sp|Q9R0X4|ACOT9_MOUSE Acyl-coenzyme A thioesterase 9, mitochondrial OS=Mus musculus
GN=Acot9 PE=1 SV=1
Length = 439
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Query: 124 PPSKSRTS---ILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGA 180
PP K R S +L +D L+++Y N +R G++LEDLD+L + Y H N
Sbjct: 78 PPRKMRDSYIEVLLPLGTDPELRDKYVTVQNTVRFGRILEDLDSLGVLVCYMHNHNHSTK 137
Query: 181 TRPILLVTASVDRM-VVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPY 235
P+ +VT VD++ + K + + D++ TG V+WVG +SME+++++ Q Y
Sbjct: 138 MSPLSIVTVLVDKIDMCKHSLSPEQDIKFTGHVSWVGNTSMEVKMKMFQLHNDEKY 193
>sp|Q3SWX2|ACOT9_BOVIN Acyl-coenzyme A thioesterase 9, mitochondrial OS=Bos taurus
GN=ACOT9 PE=2 SV=1
Length = 437
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 116 AQSELAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCC 175
+Q L + S + S L+E+Y N +R G++LEDLD+L I Y H
Sbjct: 72 SQKGLPPRTMKDSYIEVFLPLGSQPELREKYLTVQNTVRFGRILEDLDSLGVLICYMHNK 131
Query: 176 NDDGATRPILLVTASVDRM-VVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQ--STQG 232
P+ +VTA VD++ + KK + + D++ +G V+WVG++SME+++ + Q
Sbjct: 132 IHSAKMSPLSIVTALVDKIDMCKKNLSPEQDIKFSGHVSWVGKTSMEVKMHMFQLHGNDF 191
Query: 233 TPYESRVFVFLA 244
+P FV +A
Sbjct: 192 SPVLDATFVMVA 203
>sp|Q32MW3|ACO10_MOUSE Acyl-coenzyme A thioesterase 10, mitochondrial OS=Mus musculus
GN=Acot10 PE=2 SV=1
Length = 439
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Query: 124 PPSKSRTS---ILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGA 180
PP K R S +L +D L+++Y N +R G++LEDLD+L + Y H N
Sbjct: 78 PPRKIRDSYIEVLLPLGTDPELRDKYVTVQNTVRFGRILEDLDSLGVLVCYMHNHNHSTN 137
Query: 181 TRPILLVTASVDRM-VVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQ 228
+ +VT VD++ + K + + D++ TG V+WVG ++ME+++++ Q
Sbjct: 138 MSLLSIVTVLVDKIDMCKHSLSPEQDIKFTGHVSWVGNTTMEVKMKMFQ 186
>sp|P49851|YKHA_BACSU Uncharacterized acyl-CoA thioester hydrolase YkhA OS=Bacillus
subtilis (strain 168) GN=ykhA PE=3 SV=2
Length = 172
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 148 NPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLE 207
N N + GKL+ +D +A + +HC + VTAS+D + KPI +
Sbjct: 26 NNHNTLFGGKLMSYIDDIASISAARHCRRE--------TVTASMDSVDFLKPIGQKDSVC 77
Query: 208 LTGAVTWVGRSSMEIQLEVTQSTQGT-PYESRVFVFLAFWAM 248
L VTWVG SSME+ ++V + T E FL F A+
Sbjct: 78 LESYVTWVGTSSMEVFVKVIKEHLMTGERELAATSFLTFVAL 119
>sp|P0A0Q7|VDLD_HELPY Protein VdlD OS=Helicobacter pylori (strain ATCC 700392 / 26695)
GN=vdlD PE=3 SV=1
Length = 174
Score = 39.3 bits (90), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 135 KFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRM 194
K Y++ N N M G+LL LD +A S ++C VT SVD +
Sbjct: 23 KLLMSYLVVPTTANFNNVMHGGELLNLLDKVAYVCSTRYCAKGT--------VTLSVDGV 74
Query: 195 VVKKPIRVDIDLELTGAVTWVGRSSMEIQLEV 226
K PI V L ++ +VG +S E+ ++V
Sbjct: 75 TFKYPIPVGNLLTFLASINYVGNTSCEVGIKV 106
>sp|P0A0Q8|VDLD_HELPJ Protein VdlD OS=Helicobacter pylori (strain J99) GN=vdlD PE=3 SV=1
Length = 174
Score = 39.3 bits (90), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 135 KFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRM 194
K Y++ N N M G+LL LD +A S ++C VT SVD +
Sbjct: 23 KLLMSYLVVPTTANFNNVMHGGELLNLLDKVAYVCSTRYCAKGT--------VTLSVDGV 74
Query: 195 VVKKPIRVDIDLELTGAVTWVGRSSMEIQLEV 226
K PI V L ++ +VG +S E+ ++V
Sbjct: 75 TFKYPIPVGNLLTFLASINYVGNTSCEVGIKV 106
>sp|O66120|Y511_ZYMMO Uncharacterized acyl-CoA thioester hydrolase ZMO0511 OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=ZMO0511 PE=3 SV=1
Length = 149
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 148 NPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLE 207
N M G L+ LD AG ++ +H +VT + D + P++V +L
Sbjct: 32 NADGRMFGGWLMGMLDQAAGLVAARHALAR--------VVTVAADSITFHAPVQVGDELS 83
Query: 208 LTGAVTWVGRSSMEIQLE----VTQSTQGTPYESRVFVFLAF 245
L + VGR+SM+I++E V + S +F F+A
Sbjct: 84 LYARLVKVGRTSMKIEVEGWRRVRHELETIKAISGLFTFVAI 125
>sp|Q91V12|BACH_MOUSE Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus
GN=Acot7 PE=1 SV=2
Length = 381
Score = 36.6 bits (83), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 156 GKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWV 215
G ++ +D +AG ++ +HC + +VTASVD + IR + ++G +T+
Sbjct: 249 GVTMKLMDEVAGIVAARHCKTN--------IVTASVDAINFHDKIRKGCVITISGRMTFT 300
Query: 216 GRSSMEIQLEV 226
SMEI++ V
Sbjct: 301 SNKSMEIEVLV 311
>sp|Q64559|BACH_RAT Cytosolic acyl coenzyme A thioester hydrolase OS=Rattus norvegicus
GN=Acot7 PE=1 SV=4
Length = 381
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 156 GKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWV 215
G ++ +D +AG ++ +HC + +VTASVD + IR + ++G +T+
Sbjct: 249 GVTMKLMDEVAGIVAARHCKTN--------IVTASVDAINFHDKIRKGCVITISGRMTFT 300
Query: 216 GRSSMEIQLEV 226
SMEI++ V
Sbjct: 301 SNKSMEIEVLV 311
>sp|O00154|BACH_HUMAN Cytosolic acyl coenzyme A thioester hydrolase OS=Homo sapiens
GN=ACOT7 PE=1 SV=3
Length = 380
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 156 GKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWV 215
G ++ +D +AG ++ +HC + +VTASVD + IR + ++G +T+
Sbjct: 248 GVTMKLMDEVAGIVAARHCKTN--------IVTASVDAINFHDKIRKGCVITISGRMTFT 299
Query: 216 GRSSMEIQLEV 226
SMEI++ V
Sbjct: 300 SNKSMEIEVLV 310
>sp|Q8WYK0|ACO12_HUMAN Acyl-coenzyme A thioesterase 12 OS=Homo sapiens GN=ACOT12 PE=1 SV=1
Length = 555
Score = 31.6 bits (70), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 151 NEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTG 210
E+ G+LL+ +D A + KH + VTASVD + ++ RV + +
Sbjct: 24 GELSAGQLLKWIDTTACLAAEKHA--------GVSCVTASVDDIQFEETARVGQVITIKA 75
Query: 211 AVTWVGRSSMEIQLEVTQSTQGTPYESRVFV 241
VT +SMEI ++V T E V V
Sbjct: 76 KVTRAFSTSMEISIKVMVQDMLTGIEKLVSV 106
>sp|Q9ZVH0|FEZ_ARATH Protein FEZ OS=Arabidopsis thaliana GN=FEZ PE=2 SV=1
Length = 418
Score = 30.8 bits (68), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 87 MYHSPVT-NALWEARSRMFEKTGDKPIDSIAQSELAAKPP-------SKSRTSILYKFSS 138
+ SPV+ N W A R+F+KT + +++ S +++ PP S + S Y FSS
Sbjct: 156 FFDSPVSPNDSW-AICRIFKKTNTTTLRALSHSFVSSLPPETSTDTMSNQKQSNTYHFSS 214
Query: 139 DYILK 143
D ILK
Sbjct: 215 DKILK 219
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,054,142
Number of Sequences: 539616
Number of extensions: 3374362
Number of successful extensions: 7626
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 7609
Number of HSP's gapped (non-prelim): 28
length of query: 260
length of database: 191,569,459
effective HSP length: 115
effective length of query: 145
effective length of database: 129,513,619
effective search space: 18779474755
effective search space used: 18779474755
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)