Query 039457
Match_columns 260
No_of_seqs 220 out of 1218
Neff 5.1
Searched_HMMs 46136
Date Fri Mar 29 09:49:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039457.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039457hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02647 acyl-CoA thioesterase 100.0 8.7E-49 1.9E-53 378.9 22.8 187 67-253 25-211 (437)
2 COG1607 Acyl-CoA hydrolase [Li 99.9 2E-26 4.3E-31 196.7 16.0 103 141-253 19-121 (157)
3 PRK10694 acyl-CoA esterase; Pr 99.9 1.8E-23 3.9E-28 173.4 16.5 105 141-253 17-122 (133)
4 PLN02647 acyl-CoA thioesterase 99.9 9.1E-22 2E-26 191.1 17.1 117 121-253 282-403 (437)
5 KOG2763 Acyl-CoA thioesterase 99.8 6.5E-20 1.4E-24 173.5 10.9 113 117-253 13-127 (357)
6 cd03442 BFIT_BACH Brown fat-in 99.7 1.3E-15 2.8E-20 119.4 17.2 113 124-252 2-114 (123)
7 KOG2763 Acyl-CoA thioesterase 99.6 6.3E-15 1.4E-19 139.8 13.2 117 119-249 189-305 (357)
8 PRK10293 acyl-CoA esterase; Pr 99.6 1.9E-14 4.1E-19 119.8 13.1 111 118-249 24-134 (136)
9 PRK10254 thioesterase; Provisi 99.6 3.2E-14 6.9E-19 118.8 13.2 111 118-249 24-134 (137)
10 PLN02322 acyl-CoA thioesterase 99.6 1.3E-13 2.9E-18 117.5 14.7 118 119-251 17-134 (154)
11 TIGR02286 PaaD phenylacetic ac 99.5 1.7E-13 3.7E-18 108.9 13.0 107 120-249 6-112 (114)
12 TIGR00369 unchar_dom_1 unchara 99.5 3.9E-13 8.5E-18 107.0 13.0 109 120-249 8-116 (117)
13 COG2050 PaaI HGG motif-contain 99.5 3.2E-13 6.9E-18 111.6 12.6 114 118-251 24-137 (141)
14 PRK11688 hypothetical protein; 99.4 2.2E-12 4.8E-17 108.5 13.7 117 118-249 27-152 (154)
15 PF03061 4HBT: Thioesterase su 99.4 2.1E-11 4.6E-16 88.5 12.2 74 150-230 1-74 (79)
16 cd03443 PaaI_thioesterase PaaI 99.3 4.1E-11 8.8E-16 92.7 13.3 105 124-249 8-112 (113)
17 TIGR02447 yiiD_Cterm thioester 99.0 3.8E-09 8.2E-14 87.8 12.0 113 118-251 12-137 (138)
18 KOG3328 HGG motif-containing t 98.9 1.1E-08 2.5E-13 86.8 11.5 99 118-230 27-125 (148)
19 cd00586 4HBT 4-hydroxybenzoyl- 98.9 1.8E-08 3.9E-13 75.3 11.5 102 141-250 6-108 (110)
20 PRK04424 fatty acid biosynthes 98.8 2E-07 4.4E-12 81.3 13.4 100 125-250 80-181 (185)
21 cd03440 hot_dog The hotdog fol 98.7 5.5E-07 1.2E-11 62.5 12.2 94 141-248 6-99 (100)
22 cd00556 Thioesterase_II Thioes 98.7 1.6E-07 3.5E-12 71.1 9.5 85 150-249 14-98 (99)
23 TIGR02799 thio_ybgC tol-pal sy 98.5 2.4E-06 5.3E-11 67.7 12.4 103 141-252 6-110 (126)
24 PRK10800 acyl-CoA thioesterase 98.4 5.5E-06 1.2E-10 66.7 11.9 105 140-252 7-112 (130)
25 PF14539 DUF4442: Domain of un 98.4 2.8E-06 6.1E-11 70.0 10.3 109 118-248 19-130 (132)
26 TIGR00051 acyl-CoA thioester h 98.2 2.2E-05 4.8E-10 60.8 11.2 89 141-230 3-92 (117)
27 PF13279 4HBT_2: Thioesterase- 98.2 7.3E-05 1.6E-09 58.9 13.6 105 142-252 1-105 (121)
28 PRK00006 fabZ (3R)-hydroxymyri 98.0 0.00065 1.4E-08 56.0 16.2 110 128-250 35-144 (147)
29 cd01288 FabZ FabZ is a 17kD be 98.0 0.00078 1.7E-08 53.6 15.5 110 128-249 20-129 (131)
30 COG0824 FcbC Predicted thioest 98.0 0.00012 2.7E-09 60.7 11.1 102 141-252 11-114 (137)
31 cd03445 Thioesterase_II_repeat 97.8 0.00062 1.4E-08 53.1 11.5 80 149-249 14-93 (94)
32 PRK07531 bifunctional 3-hydrox 97.7 0.00063 1.4E-08 67.4 12.7 105 140-252 350-454 (495)
33 PF13622 4HBT_3: Thioesterase- 97.6 0.0012 2.5E-08 58.6 12.3 82 150-252 9-90 (255)
34 cd03449 R_hydratase (R)-hydrat 97.4 0.0051 1.1E-07 48.4 12.5 80 152-250 47-128 (128)
35 KOG4781 Uncharacterized conser 97.1 0.0021 4.5E-08 58.6 8.4 91 126-230 123-213 (237)
36 TIGR01750 fabZ beta-hydroxyacy 97.1 0.048 1E-06 44.4 15.3 110 127-249 27-139 (140)
37 TIGR00189 tesB acyl-CoA thioes 97.0 0.0058 1.3E-07 55.1 10.1 81 151-252 21-101 (271)
38 PF09500 YiiD_Cterm: Putative 97.0 0.0092 2E-07 50.7 10.3 110 120-250 20-142 (144)
39 cd00493 FabA_FabZ FabA/Z, beta 96.6 0.24 5.3E-06 38.9 16.4 112 128-249 19-130 (131)
40 PRK10526 acyl-CoA thioesterase 96.5 0.035 7.7E-07 51.4 11.5 82 150-252 31-112 (286)
41 COG4109 Predicted transcriptio 96.4 0.015 3.3E-07 56.3 8.7 81 141-230 338-418 (432)
42 PF07977 FabA: FabA-like domai 96.3 0.44 9.6E-06 38.8 16.1 102 128-230 25-131 (138)
43 cd03446 MaoC_like MoaC_like 95.7 0.1 2.3E-06 42.0 9.3 55 186-247 77-137 (140)
44 PLN02868 acyl-CoA thioesterase 95.5 0.073 1.6E-06 51.5 9.1 82 150-252 157-238 (413)
45 PRK13188 bifunctional UDP-3-O- 95.4 0.72 1.6E-05 46.2 15.8 112 126-249 346-458 (464)
46 cd03441 R_hydratase_like (R)-h 95.2 0.31 6.6E-06 38.0 10.1 68 151-229 43-114 (127)
47 cd03451 FkbR2 FkbR2 is a Strep 95.1 0.16 3.4E-06 41.3 8.3 57 188-251 80-143 (146)
48 cd03455 SAV4209 SAV4209 is a S 94.9 0.63 1.4E-05 37.0 11.2 75 153-247 46-121 (123)
49 PRK13692 (3R)-hydroxyacyl-ACP 94.8 0.16 3.5E-06 43.2 8.1 53 192-251 89-145 (159)
50 cd01289 FabA_like Domain of un 94.4 2.5 5.4E-05 34.9 15.8 92 150-251 44-137 (138)
51 COG0764 FabA 3-hydroxymyristoy 94.2 1.5 3.2E-05 37.4 12.5 88 152-251 56-144 (147)
52 cd03447 FAS_MaoC FAS_MaoC, the 94.1 1.4 3E-05 35.9 11.8 52 193-250 74-125 (126)
53 cd01287 FabA FabA, beta-hydrox 94.0 3.4 7.5E-05 35.0 15.2 110 128-249 27-145 (150)
54 cd03454 YdeM YdeM is a Bacillu 93.7 0.39 8.5E-06 38.9 7.9 55 187-248 76-137 (140)
55 PRK13691 (3R)-hydroxyacyl-ACP 93.6 0.4 8.6E-06 41.2 8.1 55 192-253 89-147 (166)
56 cd03452 MaoC_C MaoC_C The C-t 93.2 0.5 1.1E-05 38.9 7.8 52 189-247 78-135 (142)
57 cd03450 NodN NodN (nodulation 93.2 0.58 1.3E-05 39.5 8.3 27 189-215 87-113 (149)
58 PLN02370 acyl-ACP thioesterase 93.1 1.2 2.6E-05 44.0 11.5 106 139-251 143-255 (419)
59 PF01575 MaoC_dehydratas: MaoC 92.6 1.1 2.3E-05 35.8 8.7 67 152-229 52-118 (122)
60 cd03453 SAV4209_like SAV4209_l 92.5 3.6 7.8E-05 32.9 11.7 38 193-230 74-115 (127)
61 PRK08190 bifunctional enoyl-Co 89.2 5.9 0.00013 39.3 12.0 57 187-251 84-142 (466)
62 COG5496 Predicted thioesterase 89.1 12 0.00025 31.6 11.8 87 151-253 29-116 (130)
63 COG1946 TesB Acyl-CoA thioeste 84.7 5.1 0.00011 38.0 8.2 85 143-248 23-108 (289)
64 KOG3016 Acyl-CoA thioesterase 84.3 8.2 0.00018 36.7 9.4 81 148-249 35-115 (294)
65 PF13452 MaoC_dehydrat_N: N-te 82.1 7.3 0.00016 31.0 7.2 33 185-218 74-106 (132)
66 PF03756 AfsA: A-factor biosyn 81.5 26 0.00056 28.2 15.4 108 127-250 19-132 (132)
67 COG2030 MaoC Acyl dehydratase 81.4 31 0.00068 29.0 11.5 30 187-216 94-123 (159)
68 PF01643 Acyl-ACP_TE: Acyl-ACP 81.0 27 0.00058 31.7 11.3 103 140-250 8-118 (261)
69 cd03444 Thioesterase_II_repeat 80.2 23 0.00049 27.8 9.3 75 152-230 16-91 (104)
70 PLN02864 enoyl-CoA hydratase 76.3 15 0.00032 34.7 8.4 54 193-252 100-157 (310)
71 PRK11563 bifunctional aldehyde 76.3 7.1 0.00015 40.5 6.8 52 189-247 613-670 (675)
72 TIGR02278 PaaN-DH phenylacetic 74.7 8.3 0.00018 40.1 6.7 51 190-247 602-658 (663)
73 cd03448 HDE_HSD HDE_HSD The R 74.5 39 0.00084 27.3 9.4 32 193-227 76-107 (122)
74 PRK13693 (3R)-hydroxyacyl-ACP 74.1 23 0.0005 29.3 8.2 38 193-230 84-128 (142)
75 TIGR01749 fabA beta-hydroxyacy 70.4 71 0.0015 27.6 14.3 95 129-230 51-149 (169)
76 TIGR00189 tesB acyl-CoA thioes 68.0 54 0.0012 29.4 9.8 73 153-230 183-257 (271)
77 PLN02864 enoyl-CoA hydratase 65.3 92 0.002 29.4 11.1 47 193-250 259-305 (310)
78 PRK05174 3-hydroxydecanoyl-(ac 56.9 1.3E+02 0.0028 26.0 15.4 101 128-246 53-160 (172)
79 PRK10526 acyl-CoA thioesterase 48.7 1.7E+02 0.0036 27.1 9.6 53 186-245 224-277 (286)
80 PLN02868 acyl-CoA thioesterase 47.9 96 0.0021 30.0 8.2 72 153-230 327-400 (413)
81 PF14765 PS-DH: Polyketide syn 38.0 2.9E+02 0.0062 24.4 9.7 46 185-230 228-274 (295)
82 PF01336 tRNA_anti-codon: OB-f 31.8 70 0.0015 22.2 3.5 30 196-225 41-70 (75)
83 PF13622 4HBT_3: Thioesterase- 31.5 3.5E+02 0.0077 23.6 9.9 52 186-245 198-250 (255)
84 PF03622 IBV_3B: IBV 3B protei 30.3 16 0.00035 27.0 -0.1 23 34-56 27-49 (64)
85 COG1946 TesB Acyl-CoA thioeste 20.0 3.7E+02 0.0079 25.7 6.8 72 157-230 197-269 (289)
No 1
>PLN02647 acyl-CoA thioesterase
Probab=100.00 E-value=8.7e-49 Score=378.88 Aligned_cols=187 Identities=69% Similarity=1.065 Sum_probs=178.5
Q ss_pred CCCCCccccccccccccCCcceechhhHHHHHHhhhhhhccCCCCCCcccccCCCcCCCCCCeEEEEEecccccccCccc
Q 039457 67 SSKPIDAGSSMRKPLSLWPGMYHSPVTNALWEARSRMFEKTGDKPIDSIAQSELAAKPPSKSRTSILYKFSSDYILKEQY 146 (260)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~pg~~~spvt~~Lw~~R~~l~~r~~~~~~~~~~q~~L~~r~m~DS~~~~~lp~~sd~~lrp~y 146 (260)
....||+++++|||++|||||||+|||++||++|.+++|+..+++.++++|.+|+.|+|+||++++.+||++|..++|+|
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~k~~~~S~~~~~~~~~~d~~l~~~y 104 (437)
T PLN02647 25 GNGSIDAGSSTRKPLSLWPGMYHSPVTNALWEARSSIFERLLDPPKDAPPQSELLTKTPSQSRTSILYKFSSDFILREQY 104 (437)
T ss_pred CCcccCCCccccCccccCCccccChHHHHHHHHHHHHhhhccCcccccCccccccccccccceEEEEEecCCchhhchhh
Confidence 46679999999999999999999999999999999999999899999999999999999999999999999999999999
Q ss_pred CCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEEEEEEEE
Q 039457 147 RNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEV 226 (260)
Q Consensus 147 ~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V 226 (260)
+|++|++|||+||+|||.+|+++|++||+.+++.++|+.+|||+||+|+|++|+++|++|++.|+|+|+|+|||||.|+|
T Consensus 105 ~N~~G~l~gG~LLe~mD~~A~~~A~rh~~~~~~~~~p~~vVTAsVD~i~F~~Pi~~g~~v~l~g~Vt~vGrSSMEV~v~V 184 (437)
T PLN02647 105 RNPWNEVRIGKLLEDLDALAGTISVKHCSDDDSTTRPLLLVTASVDKIVLKKPIRVDVDLKIVGAVTWVGRSSMEIQLEV 184 (437)
T ss_pred cCCCCcEeHhHHHHHHHHHHHHHHHHHhCCCcccCCcceEEEEEECcEEEcCCCcCCcEEEEEEEEEEecCCeEEEEEEE
Confidence 99999999999999999999999999999877788898999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCceEEEEEEEEEEEccCh
Q 039457 227 TQSTQGTPYESRVFVFLAFWAMIGPWS 253 (260)
Q Consensus 227 ~q~~~~~~tg~~~lv~tA~FTfVA~~~ 253 (260)
.+++.+..++++..+++|+|||||++.
T Consensus 185 ~~~~~~~~~~~~~~~~~a~FtfVA~D~ 211 (437)
T PLN02647 185 IQPTKDESNTSDSVALTANFTFVARDS 211 (437)
T ss_pred EEccccCCCCcEEEEEEEEEEEEEEcC
Confidence 998744557788999999999999885
No 2
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=99.94 E-value=2e-26 Score=196.68 Aligned_cols=103 Identities=29% Similarity=0.335 Sum_probs=98.6
Q ss_pred ccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEE
Q 039457 141 ILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSM 220 (260)
Q Consensus 141 ~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSm 220 (260)
++.|.++|++|++|||+||+|||.+|+++|.+||+. .+||+++|.|+|.+|+++|+.|.+.|+|+|+|||||
T Consensus 19 lv~P~dtN~~g~ifGG~lm~~mD~~a~i~A~~~a~~--------~vVTasvd~v~F~~Pv~vGd~v~~~a~v~~~GrTSm 90 (157)
T COG1607 19 LVMPSDTNPNGTIFGGWLLSWMDLAAAIAASRHAGG--------RVVTASVDSVDFKKPVRVGDIVCLYARVVYTGRTSM 90 (157)
T ss_pred EecCCccCcccccccHHHHHHHHHHHHHHHHHHhCC--------eEEEEEeceEEEccccccCcEEEEEEEEeecCcccE
Confidence 567999999999999999999999999999999998 799999999999999999999999999999999999
Q ss_pred EEEEEEEEecCCCCCCceEEEEEEEEEEEccCh
Q 039457 221 EIQLEVTQSTQGTPYESRVFVFLAFWAMIGPWS 253 (260)
Q Consensus 221 EV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~~~ 253 (260)
+|.|+|+.++ ..+++...+++|+|||||.+.
T Consensus 91 ~V~Vev~~~~--~~~~~~~~~t~~~ft~VAvd~ 121 (157)
T COG1607 91 EVGVEVWAED--IRSGERRLATSAYFTFVAVDE 121 (157)
T ss_pred EEEEEEEEec--ccCCcceEeeeEEEEEEEECC
Confidence 9999999998 678888999999999999874
No 3
>PRK10694 acyl-CoA esterase; Provisional
Probab=99.91 E-value=1.8e-23 Score=173.41 Aligned_cols=105 Identities=17% Similarity=0.169 Sum_probs=95.5
Q ss_pred ccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEE
Q 039457 141 ILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSM 220 (260)
Q Consensus 141 ~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSm 220 (260)
.+.|+|+|++|++|||.||+|+|++|+++|.++++. .+||+++|.|+|++|+++|+.|.+.++|+++|++||
T Consensus 17 ~v~p~~~N~~g~lfGG~ll~~~D~~a~i~a~~~~~~--------~~vtv~vd~i~F~~Pv~~Gd~l~~~a~V~~~g~sS~ 88 (133)
T PRK10694 17 LAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHG--------RVVTVRVEGMTFLRPVAVGDVVCCYARCVKTGTTSI 88 (133)
T ss_pred EcChhhcCCCCcEeHHHHHHHHHHHHHHHHHHHcCC--------ceEEEEECceEECCCcccCcEEEEEEEEEEccCceE
Confidence 578999999999999999999999999999999986 689999999999999999999999999999999999
Q ss_pred EEEEEEEEecCC-CCCCceEEEEEEEEEEEccCh
Q 039457 221 EIQLEVTQSTQG-TPYESRVFVFLAFWAMIGPWS 253 (260)
Q Consensus 221 EV~V~V~q~~~~-~~tg~~~lv~tA~FTfVA~~~ 253 (260)
+|+++++.++.. ...|+.+++++|+|||||.+.
T Consensus 89 ~v~v~v~~~~~~~~~~g~~~~~~~~~~tfVavd~ 122 (133)
T PRK10694 89 SINIEVWVKKVASEPIGQRYKATEALFTYVAVDP 122 (133)
T ss_pred EEEEEEEEeecccCCCCcEEEEEEEEEEEEEECC
Confidence 999999976521 124678899999999999763
No 4
>PLN02647 acyl-CoA thioesterase
Probab=99.88 E-value=9.1e-22 Score=191.06 Aligned_cols=117 Identities=15% Similarity=0.085 Sum_probs=101.4
Q ss_pred CcCCCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEeccc
Q 039457 121 AAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPI 200 (260)
Q Consensus 121 ~~r~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv 200 (260)
....|+|+.++... +++|+++|.||+||||.||+|+|++|+++|++||+. .+||+++|.|+|++|+
T Consensus 282 ~~v~m~dT~~~~~~------iv~P~d~N~~g~iFGG~LM~~~De~A~i~A~r~a~~--------~~vt~svd~v~F~~PV 347 (437)
T PLN02647 282 NSILIRDTRLENSL------ICQPQQRNIHGRIFGGFLMRRAFELAFSTAYAFAGL--------RPYFLEVDHVDFLRPV 347 (437)
T ss_pred cceeccccceEEEE------EeCccccCCCCcEeHHHHHHHHHHHHHHHHHHHcCC--------ceEEEEecceEecCcc
Confidence 45678999988764 678999999999999999999999999999999987 5899999999999999
Q ss_pred CCCcEEEEEEEEEEEecCE-----EEEEEEEEEecCCCCCCceEEEEEEEEEEEccCh
Q 039457 201 RVDIDLELTGAVTWVGRSS-----MEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPWS 253 (260)
Q Consensus 201 ~vG~dL~l~G~Vt~tGrSS-----mEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~~~ 253 (260)
++|+.|.++|+|+|+|.+| |+|.|.+...+ +.+++.+++++++||||+.+.
T Consensus 348 ~vGdil~l~A~V~yt~~~s~g~~~i~veV~v~v~~--~~~~~~~~~n~~~fTfva~d~ 403 (437)
T PLN02647 348 DVGDFLRFKSCVLYTELENSEQPLINVEVVAHVTR--PELRSSEVSNTFYFTFTVRPE 403 (437)
T ss_pred ccCcEEEEEEEEEEEeEEecCceEEEEEEEEEEEc--CCCCcceEEEEEEEEEEEecc
Confidence 9999999999999999765 45666665554 445667899999999999763
No 5
>KOG2763 consensus Acyl-CoA thioesterase [Lipid transport and metabolism]
Probab=99.81 E-value=6.5e-20 Score=173.54 Aligned_cols=113 Identities=38% Similarity=0.617 Sum_probs=98.8
Q ss_pred ccCCCcCCCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCC-CCCCCCceEEEEEEccEE
Q 039457 117 QSELAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCND-DGATRPILLVTASVDRMV 195 (260)
Q Consensus 117 q~~L~~r~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~-~~~~~P~~iVTAsVD~I~ 195 (260)
+..||++.+ +|+.....| |.|++||++|.+|+ |+||..+ .+.++|+.+|||+||+|+
T Consensus 13 ~~~lp~~a~-~s~~~~~~p------------------rigk~lE~ld~~a~---~~hc~~~~~~~~~p~~~VtAsV~~i~ 70 (357)
T KOG2763|consen 13 REVLPPRAN-HSGNTFVGP------------------RIGKILEDLDALAV---YRHCSEAEEGATLPRTIVTASVDRID 70 (357)
T ss_pred ccCCCCccc-cccceecch------------------HHHHHHHHhhhhhh---eeecccccccCccceEEEEeeEEEEE
Confidence 446788888 888887665 77888888888777 9999874 577889999999999999
Q ss_pred EecccCCC-cEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEccCh
Q 039457 196 VKKPIRVD-IDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPWS 253 (260)
Q Consensus 196 Fl~Pv~vG-~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~~~ 253 (260)
|.+|...| .|+++.|+|+|+|+|||||+++|.|++ ..+|+..++++|+|||||++.
T Consensus 71 f~~~~~~~~~d~i~~a~Vt~a~~sSMEv~i~V~q~~--~~~~~~~~~~kA~f~fVard~ 127 (357)
T KOG2763|consen 71 FEKPSEVGQVDIIIVAKVTWAGKSSMEVSIYVMQED--LATGEKSLVLKATFTFVARDA 127 (357)
T ss_pred eeccccccceeEEEEEEEEeccccceEEEEEEEEeh--hccchhhheeeeEEEEEEecC
Confidence 99988888 689999999999999999999999955 678999999999999999975
No 6
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=99.71 E-value=1.3e-15 Score=119.40 Aligned_cols=113 Identities=33% Similarity=0.424 Sum_probs=97.2
Q ss_pred CCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCC
Q 039457 124 PPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVD 203 (260)
Q Consensus 124 ~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG 203 (260)
.++++..+..+ .++++|+|+.|.+|||.+++++|++++.++..+... .++|+.+++++|++|+..|
T Consensus 2 ~~~~~~~~~~~------~v~~~~~d~~g~v~~g~~~~~~d~a~~~~~~~~~~~--------~~~~~~~~~~~f~~p~~~g 67 (123)
T cd03442 2 PMEDTELSTRE------LVLPEDTNHHGTIFGGWLLEWMDELAGIAAYRHAGG--------RVVTASVDRIDFLKPVRVG 67 (123)
T ss_pred CCCccceEEEE------EeCCcccCcCCcEeHHHHHHHHHHHHHHHHHHHhCC--------cEEEEEECceEEcCccccC
Confidence 35677777765 458999999999999999999999999888766433 4789899899999999999
Q ss_pred cEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEccC
Q 039457 204 IDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPW 252 (260)
Q Consensus 204 ~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~~ 252 (260)
+.|.++++|+++|++++++.+++++.+ ...++.+++++|.+++|+.+
T Consensus 68 d~l~i~~~v~~~g~~~~~~~~~i~~~~--~~~~~~~~~a~~~~~~v~~~ 114 (123)
T cd03442 68 DVVELSARVVYTGRTSMEVGVEVEAED--PLTGERRLVTSAYFTFVALD 114 (123)
T ss_pred cEEEEEEEEEEecCCeEEEEEEEEEec--CCCCcEEEEEEEEEEEEEEC
Confidence 999999999999999999999999875 22345789999999999875
No 7
>KOG2763 consensus Acyl-CoA thioesterase [Lipid transport and metabolism]
Probab=99.61 E-value=6.3e-15 Score=139.81 Aligned_cols=117 Identities=21% Similarity=0.180 Sum_probs=99.2
Q ss_pred CCCcCCCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEec
Q 039457 119 ELAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKK 198 (260)
Q Consensus 119 ~L~~r~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~ 198 (260)
+.....|+|+.++... +.+|+|.|.+|++|||.||++++++|++.|+.||+. +.++.+||.|+|.+
T Consensus 189 ~~~~~~m~dT~v~sse------I~~P~~~N~~G~iFGGflMrka~ElA~~~A~~f~~~--------~p~~rsVD~i~F~~ 254 (357)
T KOG2763|consen 189 SPKMVWMKDTKVSSSE------ICQPEHRNIHGTIFGGFLMRKALELAEITAKLFCKG--------RPATRSVDDIEFQK 254 (357)
T ss_pred CCcceEeeccceeEEE------eecCcccCccCceehHHHHHHHHHHHHHHHHHHcCC--------CceEEEechhhccC
Confidence 4466778999998754 789999999999999999999999999999999987 45899999999999
Q ss_pred ccCCCcEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEE
Q 039457 199 PIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMI 249 (260)
Q Consensus 199 Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfV 249 (260)
|+.+|+.|++.|.|+||-..++.|++++.+.-.....+..+.....+|||-
T Consensus 255 pVdvG~~L~f~s~V~yT~~k~~~vqv~~~~~v~s~~~r~~~i~~~F~~t~~ 305 (357)
T KOG2763|consen 255 PVDVGCVLTFSSFVTYTDNKSIYVQVKAVASVDSSQGRSREITNAFHFTFS 305 (357)
T ss_pred cceeeeEEEEeeEEEEecCCceeEEEEEeccccccccccceeccceeeech
Confidence 999999999999999999888888888877654333344556666666665
No 8
>PRK10293 acyl-CoA esterase; Provisional
Probab=99.59 E-value=1.9e-14 Score=119.76 Aligned_cols=111 Identities=7% Similarity=0.053 Sum_probs=96.8
Q ss_pred cCCCcCCCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEe
Q 039457 118 SELAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVK 197 (260)
Q Consensus 118 ~~L~~r~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl 197 (260)
-++..-...++++++.+|+ +|+++|++|.+|||.++.++|.+++++++.+...+ ..+||..+ +++|+
T Consensus 24 LGi~i~~~~~g~~~~~~~v------~~~~~n~~G~lHGGv~~tLaD~a~~~a~~~~~~~~------~~~vTiel-~infl 90 (136)
T PRK10293 24 LDIRFEHIGDDTLEATMPV------DSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGE------QKVVGLEI-NANHV 90 (136)
T ss_pred cCcEEEEEeCCEEEEEEEc------CHHHcCCcCcccHHHHHHHHHHHHHHHHHhcccCC------ceEEEEEE-EeEEe
Confidence 4567778899999999987 68899999999999999999999998887765432 15789998 79999
Q ss_pred cccCCCcEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEE
Q 039457 198 KPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMI 249 (260)
Q Consensus 198 ~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfV 249 (260)
+|++.| .|+++|+|++.||+.+.+++++++++ +++++.+.+||.
T Consensus 91 ~p~~~g-~l~a~a~vv~~Gr~~~~~~~~v~d~~-------g~l~A~~~~t~~ 134 (136)
T PRK10293 91 RSAREG-RVRGVCKPLHLGSRHQVWQIEIFDEK-------GRLCCSSRLTTA 134 (136)
T ss_pred cccCCc-eEEEEEEEEecCCCEEEEEEEEEeCC-------CCEEEEEEEEEE
Confidence 999988 69999999999999999999999865 579999999885
No 9
>PRK10254 thioesterase; Provisional
Probab=99.58 E-value=3.2e-14 Score=118.82 Aligned_cols=111 Identities=7% Similarity=0.044 Sum_probs=96.3
Q ss_pred cCCCcCCCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEe
Q 039457 118 SELAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVK 197 (260)
Q Consensus 118 ~~L~~r~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl 197 (260)
-++.....+++++++.+|+ +|+++|++|.+|||.++.++|.+++++++.....+ ..+||..+ +++|+
T Consensus 24 LGi~i~ei~~g~~~~~l~v------~~~~~n~~G~vHGGv~~tLaD~a~g~A~~~~~~~g------~~~vTiel-~in~L 90 (137)
T PRK10254 24 LGIVYTRLGDDVLEAEMPV------DTRTHQPFGLLHGGASAALAETLGSMAGFLMTRDG------QCVVGTEL-NATHH 90 (137)
T ss_pred hCcEEEEEeCCEEEEEEEc------CccccCCCCcchHHHHHHHHHHHHHHHHHhhCCCC------CeEEEEEE-EeEEe
Confidence 4677888999999999987 68899999999999999999999999887655432 25789998 79999
Q ss_pred cccCCCcEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEE
Q 039457 198 KPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMI 249 (260)
Q Consensus 198 ~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfV 249 (260)
+|++.| .|+++|+|++.||+.+.+++++++++ +++++.+.+|..
T Consensus 91 rp~~~g-~l~a~a~vi~~Gr~~~v~~~~v~d~~-------g~l~a~~~~t~~ 134 (137)
T PRK10254 91 RPVSEG-KVRGVCQPLHLGRQNQSWEIVVFDEQ-------GRRCCTCRLGTA 134 (137)
T ss_pred ccCcCC-eEEEEEEEEecCcCEEEEEEEEEcCC-------CCEEEEEEEEEE
Confidence 999988 79999999999999999999998765 578888888764
No 10
>PLN02322 acyl-CoA thioesterase
Probab=99.55 E-value=1.3e-13 Score=117.55 Aligned_cols=118 Identities=8% Similarity=-0.012 Sum_probs=97.0
Q ss_pred CCCcCCCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEec
Q 039457 119 ELAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKK 198 (260)
Q Consensus 119 ~L~~r~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~ 198 (260)
++..-..+++++.+.+|+ +++++|++|.+|||.++.++|.+++++++...+. ..+||..+ +|+|++
T Consensus 17 Gi~l~ei~~G~~~~~m~v------~~~~~N~~G~vHGGv~atLaDta~g~A~~~~~~~-------~~~vTiel-~infLr 82 (154)
T PLN02322 17 GFEFDELSPTRVTGRLPV------SPMCCQPFKVLHGGVSALIAESLASLGAHMASGF-------KRVAGIQL-SINHLK 82 (154)
T ss_pred CCEEEEEECCEEEEEEEC------CHHHcCCCCCccHHHHHHHHHHHHHHHHhhccCC-------CceEEEEE-EEEEec
Confidence 456678899999999987 6889999999999999999999988776433221 14689998 699999
Q ss_pred ccCCCcEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEcc
Q 039457 199 PIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGP 251 (260)
Q Consensus 199 Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~ 251 (260)
|++.|+.|+++|+|++.||+...++++++...++ ...+++++..|..|+...
T Consensus 83 pa~~G~~L~Aea~vv~~Gr~~~~~ev~V~~~~~~-~~~~~~lva~a~~T~~~~ 134 (154)
T PLN02322 83 SADLGDLVFAEATPVSTGKTIQVWEVKLWKTTDK-DKANKILISSSRVTLICN 134 (154)
T ss_pred cCCCCCEEEEEEEEEecCCCEEEEEEEEEECCCC-cccCCeEEEEEEEEEEEc
Confidence 9999999999999999999999999999875421 111268999999999653
No 11
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.
Probab=99.53 E-value=1.7e-13 Score=108.95 Aligned_cols=107 Identities=14% Similarity=0.033 Sum_probs=88.9
Q ss_pred CCcCCCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecc
Q 039457 120 LAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKP 199 (260)
Q Consensus 120 L~~r~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~P 199 (260)
+..-.+.+++..+.++. +|+|+|++|.+|||.++.++|.+++++++.. . + ..+|+.+ +++|++|
T Consensus 6 ~~i~~~~~g~~~~~l~~------~~~~~n~~g~~HGG~i~al~D~~~~~~~~~~--~------~-~~~t~~~-~i~f~rp 69 (114)
T TIGR02286 6 IDILELGPGFARVAMTV------RADMLNGHGTAHGGFLFSLADSAFAYACNSY--G------D-AAVAAQC-TIDFLRP 69 (114)
T ss_pred eEEEEecCCEEEEEEEC------CHHHcCcCCCchHHHHHHHHHHHHHHHhcCC--C------C-ceEEEEE-EEEEecC
Confidence 44445678888888865 7899999999999999999999998776432 2 1 3578887 7999999
Q ss_pred cCCCcEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEE
Q 039457 200 IRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMI 249 (260)
Q Consensus 200 v~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfV 249 (260)
++.|+.|.++|+|.+.|++...+.++++..+ +++++++..||.
T Consensus 70 ~~~G~~l~~~a~v~~~g~~~~~~~~~i~~~~-------~~~va~~~~t~~ 112 (114)
T TIGR02286 70 GRAGERLEAEAVEVSRGGRTGTYDVEVVNQE-------GELVALFRGTSR 112 (114)
T ss_pred CCCCCEEEEEEEEEEeCCcEEEEEEEEEcCC-------CCEEEEEEEEEE
Confidence 9999999999999999999999999988643 478888888774
No 12
>TIGR00369 unchar_dom_1 uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.
Probab=99.51 E-value=3.9e-13 Score=107.00 Aligned_cols=109 Identities=12% Similarity=0.122 Sum_probs=91.7
Q ss_pred CCcCCCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecc
Q 039457 120 LAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKP 199 (260)
Q Consensus 120 L~~r~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~P 199 (260)
+......++++++.+|+ .|+++|+.|.+|||.++.++|.++++++....... ..+||..+ +|+|++|
T Consensus 8 ~~~~~~~~g~~~~~~~v------~~~~~n~~g~vhGG~l~~l~D~a~~~a~~~~~~~~------~~~vt~~l-~i~f~~p 74 (117)
T TIGR00369 8 IEIEELGDGFLEATMPV------DERTLQPFGSLHGGVSAALADTAGSAAGYLCNSGG------QAVVGLEL-NANHLRP 74 (117)
T ss_pred eEEEEecCCEEEEEEEc------CHHHcCCcccChHHHHHHHHHHHHHHHHHhhcCCC------ceEEEEEE-Eeeeccc
Confidence 44455678899998876 68999999999999999999999987766644432 14789998 6999999
Q ss_pred cCCCcEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEE
Q 039457 200 IRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMI 249 (260)
Q Consensus 200 v~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfV 249 (260)
++.| .|+++|+|.+.||+.+.++++++.++ .+++++|..||.
T Consensus 75 ~~~g-~l~a~a~v~~~gr~~~~~~~~i~~~~-------g~~va~~~~t~~ 116 (117)
T TIGR00369 75 AREG-KVRAIAQVVHLGRQTGVAEIEIVDEQ-------GRLCALSRGTTA 116 (117)
T ss_pred cCCC-EEEEEEEEEecCceEEEEEEEEECCC-------CCEEEEEEEEEc
Confidence 9999 99999999999999999999998754 478999998874
No 13
>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.50 E-value=3.2e-13 Score=111.60 Aligned_cols=114 Identities=14% Similarity=0.106 Sum_probs=98.6
Q ss_pred cCCCcCCCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEe
Q 039457 118 SELAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVK 197 (260)
Q Consensus 118 ~~L~~r~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl 197 (260)
.+...-.+.+++.++.+|+ .++++|++|.+|||.++.++|.+++++++...... ...||..+ +++|+
T Consensus 24 lg~~~~~~~~g~~~~~l~~------~~~~~~~~G~~HGG~i~alaD~a~~~a~~~~~~~~------~~~~ti~l-~i~fl 90 (141)
T COG2050 24 LGIEIEEIEEGEAEATLPV------DPELLNPGGILHGGVIAALADSAAGLAANSLLGVV------ALAVTLEL-NINFL 90 (141)
T ss_pred cCcEEEEEecceEEEEeec------CHHHcCCCceeeHHHHHHHHHHHHHHHHhhccCcc------ceeEEEEE-Eehhc
Confidence 3456677889999999987 57889999999999999999999999999987652 13588888 79999
Q ss_pred cccCCCcEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEcc
Q 039457 198 KPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGP 251 (260)
Q Consensus 198 ~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~ 251 (260)
+|++.|+ +.++|+|.+.||+...+.+++++.+ .+++++.+.+||.-.
T Consensus 91 r~~~~g~-v~a~a~v~~~G~~~~v~~i~v~~~~------~~~lva~~~~t~~v~ 137 (141)
T COG2050 91 RPVKEGD-VTAEARVLHLGRRVAVVEIEVKNDE------GGRLVAKGTGTYAVL 137 (141)
T ss_pred cCCCCCe-EEEEEEEEeeCCEEEEEEEEEEECC------CCeEEEEEEEEEEEe
Confidence 9999998 9999999999999999999998755 358999999998643
No 14
>PRK11688 hypothetical protein; Provisional
Probab=99.44 E-value=2.2e-12 Score=108.47 Aligned_cols=117 Identities=15% Similarity=0.129 Sum_probs=94.1
Q ss_pred cCCCcCCCCCCeEEEEEecccccccCcccCC--CCCceeHHHHHHHHHHHHHHHHHHhcCCCCC--C-----CCCceEEE
Q 039457 118 SELAAKPPSKSRTSILYKFSSDYILKEQYRN--PWNEMRMGKLLEDLDALAGTISYKHCCNDDG--A-----TRPILLVT 188 (260)
Q Consensus 118 ~~L~~r~m~DS~~~~~lp~~sd~~lrp~y~N--~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~--~-----~~P~~iVT 188 (260)
.++......++++++.+|+ +++|+| ++|.+|||.++.++|.++|++++........ . .+...+||
T Consensus 27 lG~~~~~~~~g~~~~~l~~------~~~~~~n~~~G~vHGG~i~tl~D~a~g~a~~~~~~~~~~~~~~~~~~~~~~~~vT 100 (154)
T PRK11688 27 LGLELERLEPDFVELSFKM------QPELVGNIAQSILHGGVIASVLDVAGGLVCVGGILARHEDISEEELRQRLSRLGT 100 (154)
T ss_pred hCcEEEEEeCCEEEEEeeC------CHHHcCCCCcCeeeHHHHHHHHHHHHHHHHHhhcccccccccccccccccccceE
Confidence 3566666788899998876 688996 6799999999999999999999875432100 0 01124789
Q ss_pred EEEccEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEE
Q 039457 189 ASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMI 249 (260)
Q Consensus 189 AsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfV 249 (260)
..+ +++|++|++ |+.|+++|+|.+.||+.+.++++++.++ ++++++|..||.
T Consensus 101 i~l-~i~fl~p~~-g~~l~a~a~v~~~g~r~~~~~~~i~~~~-------g~lvA~a~~t~~ 152 (154)
T PRK11688 101 IDL-RVDYLRPGR-GERFTATSSVLRAGNKVAVARMELHNEQ-------GVHIASGTATYL 152 (154)
T ss_pred EEE-EEEeeccCC-CCeEEEEEEEEEccCCEEEEEEEEECCC-------CCEEEEEEEEEE
Confidence 999 699999996 8899999999999999999999998654 589999998885
No 15
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=99.35 E-value=2.1e-11 Score=88.55 Aligned_cols=74 Identities=23% Similarity=0.263 Sum_probs=65.6
Q ss_pred CCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEe
Q 039457 150 WNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQS 229 (260)
Q Consensus 150 ~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~ 229 (260)
+|.+|||.+++|+|+++..++..+.... ..+++..+ +++|++|++.|+.|+++++|+++|++|+++.++++++
T Consensus 1 ~G~v~~g~~~~~~d~a~~~~~~~~~~~~------~~~~~~~~-~i~f~~p~~~gd~l~~~~~v~~~g~~~~~~~~~v~~~ 73 (79)
T PF03061_consen 1 NGIVHGGVYLSLFDEAASAALRSHGGDG------RGVVTVEL-SIDFLRPVRPGDTLRVEARVVRVGRKSFTVEVEVYSE 73 (79)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHHHSST------EEEEEEEE-EEEESS-BBTTSEEEEEEEEEEEESSEEEEEEEEEET
T ss_pred CCEEhHHHHHHHHHHHHHHHHHHhccCC------cceEEEEE-EEEEccccCCCeEEEEEEEEEEECCEEEEEEEEEEEC
Confidence 5899999999999999999999998752 14566665 8999999999999999999999999999999999998
Q ss_pred c
Q 039457 230 T 230 (260)
Q Consensus 230 ~ 230 (260)
+
T Consensus 74 ~ 74 (79)
T PF03061_consen 74 D 74 (79)
T ss_dssp T
T ss_pred C
Confidence 7
No 16
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=99.33 E-value=4.1e-11 Score=92.67 Aligned_cols=105 Identities=20% Similarity=0.169 Sum_probs=88.1
Q ss_pred CCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCC
Q 039457 124 PPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVD 203 (260)
Q Consensus 124 ~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG 203 (260)
...+.+.++.+++ +++++|..|.+|||.++.++|.+++..+....... ...+++.+ +++|++|++.
T Consensus 8 ~~~~~~~~~~~~~------~~~~~n~~g~vhgg~l~~l~d~a~~~~~~~~~~~~------~~~~~~~~-~i~f~~p~~~- 73 (113)
T cd03443 8 EVGPGRVVLRLPV------RPRHLNPGGIVHGGAIATLADTAGGLAALSALPPG------ALAVTVDL-NVNYLRPARG- 73 (113)
T ss_pred EecCCeEEEEeeC------cHhhcCCCCeEeHHHHHHHHHHHHHHHHhhccCCC------CceEEEEE-EEeEEcCCCC-
Confidence 4456677777755 57899999999999999999999998887765321 15789998 6999999999
Q ss_pred cEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEE
Q 039457 204 IDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMI 249 (260)
Q Consensus 204 ~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfV 249 (260)
+.|.+++++...|++++.+.+++++++ ++++++|..+|+
T Consensus 74 ~~v~~~~~v~~~g~~~~~~~~~~~~~~-------~~~~a~a~~~~~ 112 (113)
T cd03443 74 GDLTARARVVKLGRRLAVVEVEVTDED-------GKLVATARGTFA 112 (113)
T ss_pred CeEEEEEEEEecCceEEEEEEEEECCC-------CCEEEEEEEEEe
Confidence 899999999999999999999998764 368889888876
No 17
>TIGR02447 yiiD_Cterm thioesterase domain, putative. This family consists of a broadly distributed uncharacterized domain found often as a standalone protein. The member from Shewanella oneidensis, PDB|1T82_A (Forouhar, et al., unpublished) is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an Acetyltransf_1 domain (PFAM model pfam00583). The function of this protein is unknown.
Probab=99.03 E-value=3.8e-09 Score=87.76 Aligned_cols=113 Identities=9% Similarity=-0.016 Sum_probs=83.6
Q ss_pred cCCCcCCCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEe
Q 039457 118 SELAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVK 197 (260)
Q Consensus 118 ~~L~~r~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl 197 (260)
-++......++++.+.+|+ .+. +|++|++|||.++.++|..++.+++........ ...+||..+ +|+|+
T Consensus 12 lGi~v~e~~~g~~~v~~pl------~~n-~N~~G~~hGG~l~tlad~a~~~~~~~~~~~~~~---~~~~vt~~~-~i~yl 80 (138)
T TIGR02447 12 MGIAVSSYTGGELRLSAPL------AAN-INHHGTMFGGSLYTLATLSGWGLLWLRLQELGI---DGDIVIADS-HIRYL 80 (138)
T ss_pred cCCEEEEeeCCEEEEEeEC------CCC-cCCCCceehhHHHHHHHHHHHHHHHHHHHHhCC---CCcEEEEEe-eeEEc
Confidence 3456667788999999987 454 899999999999999995544434322211000 125789987 79999
Q ss_pred cccCCCcEEEEEEEE-------------EEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEcc
Q 039457 198 KPIRVDIDLELTGAV-------------TWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGP 251 (260)
Q Consensus 198 ~Pv~vG~dL~l~G~V-------------t~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~ 251 (260)
+|++.+ +.+++.+ ..-||+.+.+.+++++ + +++++++..+|++.
T Consensus 81 ~P~~~~--~~a~~~~~~~~~~~~~~~~l~~~gr~~~~~~~~v~~-~-------~~lvA~~~g~~~~~ 137 (138)
T TIGR02447 81 APVTGD--PVANCEAPDLESWEAFLATLQRGGKARVKLEAQISS-D-------GKLAATFSGEYVAL 137 (138)
T ss_pred CCcCCC--eEEEEEcCCHHHHHHHHHHHHhCCceEEEEEEEEEE-C-------CEEEEEEEEEEEEe
Confidence 999853 6666666 6778999999999984 3 38999999999863
No 18
>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]
Probab=98.94 E-value=1.1e-08 Score=86.79 Aligned_cols=99 Identities=13% Similarity=0.160 Sum_probs=85.1
Q ss_pred cCCCcCCCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEe
Q 039457 118 SELAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVK 197 (260)
Q Consensus 118 ~~L~~r~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl 197 (260)
.++..-...+++++..+. |+++++|+.|++|||..+.+.|.++..++.--.+.. ..|.+-+ +|.|+
T Consensus 27 ~~i~~~~~~~Grv~ce~k------V~~~~~N~~k~LHGG~tAtLvD~i~s~~~~~~~~~~-------~gvsvdL-svsyL 92 (148)
T KOG3328|consen 27 NNIRIVSAEPGRVSCELK------VTPDHLNRFKTLHGGATATLVDLITSAALLMTSGFK-------PGVSVDL-SVSYL 92 (148)
T ss_pred CceEEeeccCceEEEEEE------eCHHHcCccccccccchhhHHHHHhhHHHHhccCCC-------CceEEEE-Ehhhc
Confidence 456777788999999775 579999999999999999999999988755544432 4677777 79999
Q ss_pred cccCCCcEEEEEEEEEEEecCEEEEEEEEEEec
Q 039457 198 KPIRVDIDLELTGAVTWVGRSSMEIQLEVTQST 230 (260)
Q Consensus 198 ~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~ 230 (260)
.|+..|++|.++++|+.+||+-..+.|+++...
T Consensus 93 ~~AklGe~l~i~a~~vr~Gk~la~t~v~l~~K~ 125 (148)
T KOG3328|consen 93 SSAKLGEELEIEATVVRVGKTLAFTDVELRRKS 125 (148)
T ss_pred cccCCCCeEEEEEEEeecCceEEEEEEEEEEcC
Confidence 999999999999999999999999999998876
No 19
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=98.94 E-value=1.8e-08 Score=75.34 Aligned_cols=102 Identities=13% Similarity=0.132 Sum_probs=81.3
Q ss_pred ccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCE
Q 039457 141 ILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDG-ATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSS 219 (260)
Q Consensus 141 ~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~-~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSS 219 (260)
.+++.++|..|.+++|.+++++|+++...+.+....... .......++... +++|++|++.|+.|+++++++..++++
T Consensus 6 ~v~~~d~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~i~v~~~~~~~~~~~ 84 (110)
T cd00586 6 RVRFGDTDAAGHVNNARYLRYFEEAREEFLRELGLGYDELEEQGLGLVVVEL-EIDYLRPLRLGDRLTVETRVLRLGRKS 84 (110)
T ss_pred EEEEhhcCCCCEEchhHHHHHHHHHHHHHHHHcCCCHHHHHhCCceEEEEEe-EeeEcCccCCCCEEEEEEEEEecCcEE
Confidence 457899999999999999999999998777765432110 001124667776 699999999999999999999999999
Q ss_pred EEEEEEEEEecCCCCCCceEEEEEEEEEEEc
Q 039457 220 MEIQLEVTQSTQGTPYESRVFVFLAFWAMIG 250 (260)
Q Consensus 220 mEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA 250 (260)
+.+.+++..++ +++++++..+++.
T Consensus 85 ~~~~~~~~~~~-------g~~~a~~~~~~~~ 108 (110)
T cd00586 85 FTFEQEIFRED-------GELLATAETVLVC 108 (110)
T ss_pred EEEEEEEECCC-------CeEEEEEEEEEEE
Confidence 99999887653 4788888888764
No 20
>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional
Probab=98.75 E-value=2e-07 Score=81.28 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=78.8
Q ss_pred CCCC-eEEEEEecccccccCcccC-CCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCC
Q 039457 125 PSKS-RTSILYKFSSDYILKEQYR-NPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRV 202 (260)
Q Consensus 125 m~DS-~~~~~lp~~sd~~lrp~y~-N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~v 202 (260)
..++ +..+...+. +... |.+|.+|||.++.++|.++... .+. ..+.+.++++.|++|+.+
T Consensus 80 ie~g~~a~~~k~Vt------~ne~fn~~~i~hG~f~~aqa~~la~~~----~~~--------~~~~~~i~~irF~kPV~p 141 (185)
T PRK04424 80 LELGRSAISILEIT------EEMVFSKTGIARGHHLFAQANSLAVAV----IDA--------ELALTGVANIRFKRPVKL 141 (185)
T ss_pred ecCCcEEEEEEecC------hhhccCCCCeecHHHHHHHHHHHHHHh----cCC--------cEEEEEeeeEEEccCCCC
Confidence 3455 566666553 3445 8899999999999999865432 122 346778889999999999
Q ss_pred CcEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEc
Q 039457 203 DIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIG 250 (260)
Q Consensus 203 G~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA 250 (260)
|+.|.++++|+..+++...+.+++.+++ ..+..|.+++|+
T Consensus 142 GD~L~~ea~v~~~~~~~~~v~~~~~v~g--------~~V~ege~~~~~ 181 (185)
T PRK04424 142 GERVVAKAEVVRKKGNKYIVEVKSYVGD--------ELVFRGKFIMYR 181 (185)
T ss_pred CCEEEEEEEEEEccCCEEEEEEEEEECC--------EEEEEEEEEEEE
Confidence 9999999999999988888888887543 689999999998
No 21
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=98.72 E-value=5.5e-07 Score=62.47 Aligned_cols=94 Identities=24% Similarity=0.235 Sum_probs=77.1
Q ss_pred ccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEE
Q 039457 141 ILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSM 220 (260)
Q Consensus 141 ~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSm 220 (260)
.+++.++|..+.++||.+++++|.++...+...... ....+++.++ ++|.+|+..|+.|.+++++...+++++
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~g~~v~~~~~~~~~~~~~~ 78 (100)
T cd03440 6 TVTPEDIDGGGIVHGGLLLALADEAAGAAAARLGGR------GLGAVTLSLD-VRFLRPVRPGDTLTVEAEVVRVGRSSV 78 (100)
T ss_pred EeCHHHcCcCCccchHHHHHHHHHHHHHHHHHhccC------CCeEEEEEEE-eEEecCCCCCCEEEEEEEEEeccccEE
Confidence 356778889999999999999999998777665421 1147788886 999999999999999999999999999
Q ss_pred EEEEEEEEecCCCCCCceEEEEEEEEEE
Q 039457 221 EIQLEVTQSTQGTPYESRVFVFLAFWAM 248 (260)
Q Consensus 221 EV~V~V~q~~~~~~tg~~~lv~tA~FTf 248 (260)
.+.+.+.+.+ ++++..+..++
T Consensus 79 ~~~~~~~~~~-------~~~~~~~~~~~ 99 (100)
T cd03440 79 TVEVEVRNED-------GKLVATATATF 99 (100)
T ss_pred EEEEEEECCC-------CCEEEEEEEEe
Confidence 9988887763 46777776665
No 22
>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=98.69 E-value=1.6e-07 Score=71.11 Aligned_cols=85 Identities=15% Similarity=-0.032 Sum_probs=72.1
Q ss_pred CCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEe
Q 039457 150 WNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQS 229 (260)
Q Consensus 150 ~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~ 229 (260)
.|.+|||.++.++|.+++.++....+. ...+|..+ +++|++|...|+.+.+++++.+.|++...+++++++.
T Consensus 14 ~~~~hgg~la~l~D~a~~~~~~~~~~~-------~~~~t~~~-~i~F~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~ 85 (99)
T cd00556 14 DRRVFGGQLAAQSDLAALRTVPRPHGA-------SGFASLDH-HIYFHRPGDADEWLLYEVESLRDGRSRALRRGRAYQR 85 (99)
T ss_pred CHHHHHHHHHHHHHHHHHhhhhcccCC-------CCeeeeEE-EEEEcCCCCCCccEEEEEEecccCCCceEEEEEEECC
Confidence 688999999999999998887664431 13577777 7999999999999999999999999999999999987
Q ss_pred cCCCCCCceEEEEEEEEEEE
Q 039457 230 TQGTPYESRVFVFLAFWAMI 249 (260)
Q Consensus 230 ~~~~~tg~~~lv~tA~FTfV 249 (260)
+ +++++++..+|.
T Consensus 86 ~-------G~lva~~~~~~~ 98 (99)
T cd00556 86 D-------GKLVASATQSFL 98 (99)
T ss_pred C-------CcEEEEEEEeEc
Confidence 5 478888877764
No 23
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=98.52 E-value=2.4e-06 Score=67.66 Aligned_cols=103 Identities=14% Similarity=0.022 Sum_probs=79.8
Q ss_pred ccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCC-CC-CCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecC
Q 039457 141 ILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCND-DG-ATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRS 218 (260)
Q Consensus 141 ~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~-~~-~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrS 218 (260)
.++..++++.|.++.|+++.+++++............ +. .......|.+.. +++|++|++.|+.|.+..+|...|++
T Consensus 6 ~vr~~d~D~~Ghv~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~vv~~~-~i~y~~~~~~gd~v~v~~~v~~~~~~ 84 (126)
T TIGR02799 6 RVYYEDTDAGGVVYHANYLKFMERARTEWLRALGFEQSALLEETGLVFVVRSM-ELDYLKPARLDDLLTVTTRVVELKGA 84 (126)
T ss_pred EEEEeccCCCceEEechHHHHHHHHHHHHHHHcCCCHHHHhhcCCcEEEEEEE-EEEEcCcccCCCEEEEEEEEEecCce
Confidence 5678999999999999999999988665444332211 11 111234666666 69999999999999999999999999
Q ss_pred EEEEEEEEEEecCCCCCCceEEEEEEEEEEEccC
Q 039457 219 SMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPW 252 (260)
Q Consensus 219 SmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~~ 252 (260)
|+.+..++.. + ++.++.|..++|..+
T Consensus 85 ~~~~~~~i~~-~-------g~~~a~~~~~~v~vd 110 (126)
T TIGR02799 85 SLVFAQEVRR-G-------DTLLCEATVEVACVD 110 (126)
T ss_pred EEEEEEEEEe-C-------CEEEEEEEEEEEEEE
Confidence 9999999984 3 357889998888764
No 24
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=98.41 E-value=5.5e-06 Score=66.71 Aligned_cols=105 Identities=10% Similarity=0.035 Sum_probs=81.0
Q ss_pred cccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCC-CCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecC
Q 039457 140 YILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCND-DGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRS 218 (260)
Q Consensus 140 ~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~-~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrS 218 (260)
..++..+++..|.++-+.++.++++++.-......... +........+.+.. +++|++|+..|+.|.++..|...|++
T Consensus 7 ~~Vr~~d~D~~Ghv~~~~y~~~~e~a~~~~~~~~g~~~~~~~~~~~~~~v~~~-~i~y~~~~~~~d~i~v~t~v~~~~~~ 85 (130)
T PRK10800 7 VRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQQALLAERVAFVVRKM-TVEYYAPARLDDMLEVQSEITSMRGT 85 (130)
T ss_pred EEEeehhcCCCCeEehHHHHHHHHHHHHHHHHHcCCCHHHHHhCCCEEEEEEE-EEEEcCcccCCCEEEEEEEEEeeCcE
Confidence 35678999999999999999999998775443332111 00111235677777 69999999999999999999999999
Q ss_pred EEEEEEEEEEecCCCCCCceEEEEEEEEEEEccC
Q 039457 219 SMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPW 252 (260)
Q Consensus 219 SmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~~ 252 (260)
|+.+..++...+ .+++++|..++|..+
T Consensus 86 s~~~~~~i~~~~-------g~~~a~~~~~~v~~d 112 (130)
T PRK10800 86 SLTFTQRIVNAE-------GTLLNEAEVLIVCVD 112 (130)
T ss_pred EEEEEEEEEcCC-------CeEEEEEEEEEEEEE
Confidence 999998887543 468888888888765
No 25
>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B.
Probab=98.40 E-value=2.8e-06 Score=69.96 Aligned_cols=109 Identities=17% Similarity=0.218 Sum_probs=74.9
Q ss_pred cCCCcCCCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEe
Q 039457 118 SELAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVK 197 (260)
Q Consensus 118 ~~L~~r~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl 197 (260)
.++....+.+.++.+.+|+ ++...|+.|++|||.|..++|.++|+.+..+.+.. +.++...+ +|+|+
T Consensus 19 ~g~~i~~~~~~~~~v~l~~------~~~~~N~~gt~h~gAl~~laE~~~g~~~~~~l~~~------~~~~~k~~-~i~f~ 85 (132)
T PF14539_consen 19 AGIRIEEVDPGRVVVRLPL------RPRNRNHVGTIHAGALFTLAEPAYGLLLMSNLGDK------YRVWDKSA-EIDFL 85 (132)
T ss_dssp CT-EEEEEETTEEEEEE-S-------CCGB-TTSSB-HHHHHHHHHCHHHHHHHHHS-TT------EEEEEEEE-EEEE-
T ss_pred ceeEEEEEcCCEEEEEEcC------CccccCcCcchHHHHHHHHHHHHHHHHHHHhCCCc------EEEEEEee-EEEEE
Confidence 3456667788899999987 68899999999999999999999999999888763 35566776 69999
Q ss_pred cccCCCcEEEEEEEEEEE--e-cCEEEEEEEEEEecCCCCCCceEEEEEEEEEE
Q 039457 198 KPIRVDIDLELTGAVTWV--G-RSSMEIQLEVTQSTQGTPYESRVFVFLAFWAM 248 (260)
Q Consensus 198 ~Pv~vG~dL~l~G~Vt~t--G-rSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTf 248 (260)
+|.+ | +|.+++++..- + +...++.+++++.+ ++.++.+.+|.
T Consensus 86 kpa~-g-~v~a~~~~~~e~~~~~~~~~~~v~i~D~~-------G~~Va~~~~t~ 130 (132)
T PF14539_consen 86 KPAR-G-DVTATAELTEEQIGERGELTVPVEITDAD-------GEVVAEATITW 130 (132)
T ss_dssp S----S--EEEEEE-TCCHCCHEEEEEEEEEEEETT-------C-EEEEEEEEE
T ss_pred eccC-C-cEEEEEEcCHHHhCCCcEEEEEEEEEECC-------CCEEEEEEEEE
Confidence 9976 3 47777777652 2 55666777776554 46788888876
No 26
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=98.23 E-value=2.2e-05 Score=60.81 Aligned_cols=89 Identities=12% Similarity=0.061 Sum_probs=68.5
Q ss_pred ccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCC-CCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCE
Q 039457 141 ILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCND-DGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSS 219 (260)
Q Consensus 141 ~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~-~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSS 219 (260)
.++..++++.|.++.+.++.++++++........... .........+++.. +++|++|++.|+.|.++.++...|++|
T Consensus 3 ~V~~~d~D~~G~v~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~v~~~-~i~y~~~~~~gd~v~v~~~~~~~~~~s 81 (117)
T TIGR00051 3 RVYYEDTDAQGIVYHANYLRYCERARTEFLRSLGFPQSVLRAEGVAFVVVNI-NIEYKKPARLDDVLEIRTQIEELNGFS 81 (117)
T ss_pred EEEEeccCCCcEEEehHHHHHHHHHHHHHHHHcCCCHHHHHhCCCEEEEEEE-EEEECCcccCCCEEEEEEEEEecCcEE
Confidence 3567899999999999999999998765544432110 00111234566666 689999999999999999999999999
Q ss_pred EEEEEEEEEec
Q 039457 220 MEIQLEVTQST 230 (260)
Q Consensus 220 mEV~V~V~q~~ 230 (260)
+.+..++...+
T Consensus 82 ~~~~~~i~~~~ 92 (117)
T TIGR00051 82 FVFSQEIFNED 92 (117)
T ss_pred EEEEEEEEeCC
Confidence 99999998754
No 27
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=98.19 E-value=7.3e-05 Score=58.87 Aligned_cols=105 Identities=13% Similarity=0.071 Sum_probs=73.0
Q ss_pred cCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEEE
Q 039457 142 LKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSME 221 (260)
Q Consensus 142 lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmE 221 (260)
|+..+++ .|.++-++.+++++++-.-......-.......-..++++.. +++|++|++.|+.+.+..++...|++|+.
T Consensus 1 Vr~~D~D-~ghv~n~~Y~~~~e~ar~~~~~~~g~~~~~~~~~~~~~v~~~-~i~y~~~~~~~d~~~v~~~~~~~~~~s~~ 78 (121)
T PF13279_consen 1 VRWSDTD-NGHVNNARYLRYFEEAREEFLEELGLYDELQGQGIGFVVAES-EIDYLRPLRFGDRLEVETRVEEIGGKSFR 78 (121)
T ss_dssp --GGGB--TSSB-HHHHHHHHHHHHHHHHHHHTSCHHHTTTTEEEEEEEE-EEEE-S--BTTSEEEEEEEEEEEESSEEE
T ss_pred CCHHHcc-CCeEcHHHHHHHHHHHHHHHHHhcchhhHHHhcCceEEEEEE-EEEEcccccCCCEEEEEEEEEEECCcEEE
Confidence 4678899 999999999999998643222211111101111235778887 69999999999999999999999999999
Q ss_pred EEEEEEEecCCCCCCceEEEEEEEEEEEccC
Q 039457 222 IQLEVTQSTQGTPYESRVFVFLAFWAMIGPW 252 (260)
Q Consensus 222 V~V~V~q~~~~~~tg~~~lv~tA~FTfVA~~ 252 (260)
+.-++.... +|+.++++++..++|..+
T Consensus 79 ~~~~i~~~~----~g~~~~~a~~~~~~v~~d 105 (121)
T PF13279_consen 79 FEQEIFRPA----DGKGELAATGRTVMVFVD 105 (121)
T ss_dssp EEEEEEECS----TTEEEEEEEEEEEEEEEE
T ss_pred EEEEEEEcC----CCceEEEEEEEEEEEEEe
Confidence 999998833 345678999999988754
No 28
>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed
Probab=98.00 E-value=0.00065 Score=56.05 Aligned_cols=110 Identities=15% Similarity=0.056 Sum_probs=77.4
Q ss_pred CeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEE
Q 039457 128 SRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLE 207 (260)
Q Consensus 128 S~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~ 207 (260)
.+.+...-++.|...-..|--....+.|=.++|++..++++.+...... .+...+.++++++.|++|+.+|+.|+
T Consensus 35 ~~~~~~~~v~~d~~~~~ghfp~~pi~PG~l~iE~~aQ~~~~~~~~~~~~-----~~~~~~l~gi~~~kF~~pv~pGd~l~ 109 (147)
T PRK00006 35 KSIVAIKNVTINEPFFQGHFPGYPVMPGVLIIEAMAQAAGVLALKSEEN-----KGKLVYFAGIDKARFKRPVVPGDQLI 109 (147)
T ss_pred CEEEEEEEecCCCccccCCCcCCCcCchhHHHHHHHHHHHHHHhcCcCc-----CCcEEEEeeeeEEEEccccCCCCEEE
Confidence 4666666665553322111111234667778898888888766443211 12245678889999999999999999
Q ss_pred EEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEc
Q 039457 208 LTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIG 250 (260)
Q Consensus 208 l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA 250 (260)
++++|...++..+.+.+++.+. ++.++++.++|+-
T Consensus 110 i~~~i~~~~~~~v~~~~~~~~~--------g~~v~~~~~~~~~ 144 (147)
T PRK00006 110 LEVELLKQRRGIWKFKGVATVD--------GKLVAEAELMFAI 144 (147)
T ss_pred EEEEEEEeeCCEEEEEEEEEEC--------CEEEEEEEEEEEE
Confidence 9999999998888888888753 3788999988863
No 29
>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.
Probab=97.96 E-value=0.00078 Score=53.57 Aligned_cols=110 Identities=15% Similarity=0.028 Sum_probs=77.3
Q ss_pred CeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEE
Q 039457 128 SRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLE 207 (260)
Q Consensus 128 S~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~ 207 (260)
...+...-+..|...-..|-=-...+.|=.++|++..++++........ ..+..++...+.++.|.+|+.+|+.|+
T Consensus 20 ~~~~~~~~v~~d~~~~~~hf~~~pi~Pg~l~iE~~aQ~~~~~~~~~~~~----~~~~~~~l~~~~~~kf~~pv~pgd~l~ 95 (131)
T cd01288 20 KSIVAIKNVTINEPFFQGHFPGNPIMPGVLIIEALAQAAGILGLKSLED----FEGKLVYFAGIDKARFRKPVVPGDQLI 95 (131)
T ss_pred CEEEEEEEecCCChhhcCCCCCCCcCCchHHHHHHHHHHHHHhhhcccc----cCCcEEEEeeecccEEccccCCCCEEE
Confidence 3555555555554322222111144667778899999988765442110 011246788889999999999999999
Q ss_pred EEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEE
Q 039457 208 LTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMI 249 (260)
Q Consensus 208 l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfV 249 (260)
+++++...++....+.+++..++ +.+++|.++|+
T Consensus 96 i~~~v~~~~~~~~~~~~~~~~~g--------~~v~~~~~~~~ 129 (131)
T cd01288 96 LEVELLKLRRGIGKFKGKAYVDG--------KLVAEAELMFA 129 (131)
T ss_pred EEEEEEEeeCCEEEEEEEEEECC--------EEEEEEEEEEE
Confidence 99999999999988888886543 78899999886
No 30
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=97.95 E-value=0.00012 Score=60.68 Aligned_cols=102 Identities=11% Similarity=0.064 Sum_probs=80.9
Q ss_pred ccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCC--CCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecC
Q 039457 141 ILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDG--ATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRS 218 (260)
Q Consensus 141 ~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~--~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrS 218 (260)
.++-.+++..|.++-++.+.+++.+-.-.... .+.... ...-+.++++.. +++|++|++.|+.+.++.+|...|++
T Consensus 11 ~V~~~d~D~~GhV~~a~Yl~~fE~ar~~~l~~-~g~~~~~~~~~~~~~~v~~~-~i~y~~p~~~~d~l~v~~~v~~~~~~ 88 (137)
T COG0824 11 RVRYEDTDAMGHVNNANYLVFFEEARTEFLRA-LGFDYADLEEGGIAFVVVEA-EIDYLRPARLGDVLTVRTRVEELGGK 88 (137)
T ss_pred EEEhhhcCcccEEecchHHHHHHHHHHHHHHH-cCCCHHHHhhCCcEEEEEEE-EeEECCCccCCCEEEEEEEEEeecCe
Confidence 46778999999999999999999876433322 222110 000135788887 69999999999999999999999999
Q ss_pred EEEEEEEEEEecCCCCCCceEEEEEEEEEEEccC
Q 039457 219 SMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPW 252 (260)
Q Consensus 219 SmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~~ 252 (260)
|+...-++..++ +++++|..++|+..
T Consensus 89 s~~~~~~i~~~~--------~l~a~~~~~~V~v~ 114 (137)
T COG0824 89 SLTLGYEIVNED--------ELLATGETTLVCVD 114 (137)
T ss_pred EEEEEEEEEeCC--------EEEEEEEEEEEEEE
Confidence 999999998754 78999999998865
No 31
>cd03445 Thioesterase_II_repeat2 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=97.76 E-value=0.00062 Score=53.11 Aligned_cols=80 Identities=19% Similarity=0.118 Sum_probs=61.6
Q ss_pred CCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEE
Q 039457 149 PWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQ 228 (260)
Q Consensus 149 ~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q 228 (260)
..+.+|||.++.++..+|. +....+ ....++ ++.|++|...+..+.++-++.+.||+...+++++.|
T Consensus 14 ~~~~~~GG~l~a~a~~Aa~----~~~~~~--------~~~~s~-~~~Fl~p~~~~~pv~~~v~~lr~GRs~~~~~V~~~Q 80 (94)
T cd03445 14 QGRGVFGGQVLAQALVAAA----RTVPDD--------RVPHSL-HSYFLRPGDPDQPIEYEVERLRDGRSFATRRVRAVQ 80 (94)
T ss_pred CCCceEHHHHHHHHHHHHH----hhCCCC--------CCeEEE-EEEecCCCCCCCCEEEEEEEEECCCcEEEEEEEEEE
Confidence 4678999999997765544 444331 123455 579999999988999999999999999999999988
Q ss_pred ecCCCCCCceEEEEEEEEEEE
Q 039457 229 STQGTPYESRVFVFLAFWAMI 249 (260)
Q Consensus 229 ~~~~~~tg~~~lv~tA~FTfV 249 (260)
++ +++.++..+|.
T Consensus 81 ~g--------~~~~~a~~sf~ 93 (94)
T cd03445 81 NG--------KVIFTATASFQ 93 (94)
T ss_pred CC--------EEEEEEEEEEe
Confidence 74 56677766663
No 32
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=97.66 E-value=0.00063 Score=67.42 Aligned_cols=105 Identities=5% Similarity=-0.066 Sum_probs=80.4
Q ss_pred cccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCE
Q 039457 140 YILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSS 219 (260)
Q Consensus 140 ~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSS 219 (260)
..|++.+++..|.++-++++.++++...-.........+....-...+.+.. +|+|++|++.|+.|.++.+|...|++|
T Consensus 350 ~~V~~~~~D~~Ghvnn~~Yl~~~e~Ar~~~~~~~G~~~~~~~~~~~~vvv~~-~i~y~rp~~~gD~v~I~t~v~~~~~~s 428 (495)
T PRK07531 350 TKVPPAWVDYNGHMTEHRYLQVFGDTTDALLRLIGVDAAYVAAGHSYYTVET-HIRHLGEAKAGQALHVETQLLSGDEKR 428 (495)
T ss_pred EEECHHHcCCCCeEcHHHHHHHHHHHHHHHHHHcCCCHHHHhcCCcEEEEEE-EEEEcccCCCCCEEEEEEEEEecCCcE
Confidence 3568899999999999999999998876544443211110000124566776 699999999999999999999999999
Q ss_pred EEEEEEEEEecCCCCCCceEEEEEEEEEEEccC
Q 039457 220 MEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPW 252 (260)
Q Consensus 220 mEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~~ 252 (260)
+.+..+++..+ .++++++..++|..+
T Consensus 429 ~~~~~~i~~~~-------g~l~A~g~~~~v~vD 454 (495)
T PRK07531 429 LHLFHTLYDAG-------GELIATAEHMLLHVD 454 (495)
T ss_pred EEEEEEEECCC-------CcEEEEEEEEEEEEE
Confidence 99999998632 458888888888765
No 33
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=97.60 E-value=0.0012 Score=58.65 Aligned_cols=82 Identities=22% Similarity=0.112 Sum_probs=56.9
Q ss_pred CCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEe
Q 039457 150 WNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQS 229 (260)
Q Consensus 150 ~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~ 229 (260)
.+.+|||.++..+-. ++..+...+ .....++ +++|++|+..| .++++.++.+.||+.-.+++++.|.
T Consensus 9 g~~~~GG~~a~~~~~----A~~~~~~~~-------~~~~~s~-~~~fl~p~~~~-~~~~~v~~~r~Gr~~~~~~v~~~q~ 75 (255)
T PF13622_consen 9 GRVVHGGYLAQLLAA----AARTHAPPP-------GFDPHSL-HVYFLRPVPPG-PVEYRVEVLRDGRSFSTRQVELSQD 75 (255)
T ss_dssp TTCE-HHHHHHHHHH----HHHHCHTTT-------SSEEEEE-EEEESS--BSC-EEEEEEEEEEESSSEEEEEEEEEET
T ss_pred CCcChhHHHHHHHHH----HHHHhccCC-------CCceEEE-EeEeccccccC-CEEEEEEEeeCCCcEEEEEEEEEEC
Confidence 567999966544332 222232211 1345666 57999999999 9999999999999999999999997
Q ss_pred cCCCCCCceEEEEEEEEEEEccC
Q 039457 230 TQGTPYESRVFVFLAFWAMIGPW 252 (260)
Q Consensus 230 ~~~~~tg~~~lv~tA~FTfVA~~ 252 (260)
+ +++.+|..+|....
T Consensus 76 ~--------~~~~~a~~~f~~~~ 90 (255)
T PF13622_consen 76 G--------KVVATATASFGRPE 90 (255)
T ss_dssp T--------EEEEEEEEEEE--T
T ss_pred C--------cCEEEEEEEEccCc
Confidence 6 58888888887654
No 34
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=97.41 E-value=0.0051 Score=48.42 Aligned_cols=80 Identities=13% Similarity=0.005 Sum_probs=56.8
Q ss_pred ceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEec--CEEEEEEEEEEe
Q 039457 152 EMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGR--SSMEIQLEVTQS 229 (260)
Q Consensus 152 ~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGr--SSmEV~V~V~q~ 229 (260)
.+||+.++.+++.+.+ . .... + ..+.... ++.|++|+.+|+.|.++++|+.... ..+++.+++...
T Consensus 47 i~~g~~~~~~~~~~~~---~-~~~g------~-~~~~~~~-~~~f~~Pv~~gd~l~~~~~v~~~~~~~~~v~~~~~~~~~ 114 (128)
T cd03449 47 IAHGMLTASLISAVLG---T-LLPG------P-GTIYLSQ-SLRFLRPVFIGDTVTATVTVTEKREDKKRVTLETVCTNQ 114 (128)
T ss_pred eecHHHHHHHHHHHHh---c-cCCC------c-eEEEEEE-EEEECCCccCCCEEEEEEEEEEEecCCCEEEEEEEEEeC
Confidence 5889988888765432 1 1111 1 3445554 7999999999999999999998765 677777777655
Q ss_pred cCCCCCCceEEEEEEEEEEEc
Q 039457 230 TQGTPYESRVFVFLAFWAMIG 250 (260)
Q Consensus 230 ~~~~~tg~~~lv~tA~FTfVA 250 (260)
+ .+++.++..++.+
T Consensus 115 ~-------g~~v~~g~~~~~~ 128 (128)
T cd03449 115 N-------GEVVIEGEAVVLA 128 (128)
T ss_pred C-------CCEEEEEEEEEeC
Confidence 4 4678888887653
No 35
>KOG4781 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.14 E-value=0.0021 Score=58.64 Aligned_cols=91 Identities=14% Similarity=0.136 Sum_probs=71.7
Q ss_pred CCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcE
Q 039457 126 SKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDID 205 (260)
Q Consensus 126 ~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~d 205 (260)
+.....+.+.++ ..-.+..|.+|||.|..+||++.++|+.--.+. ...||+.+ ++.|..|+.....
T Consensus 123 s~~e~v~i~h~G------~~L~gy~~~iHgG~IATllde~L~~c~fl~~pn-------k~~vTanL-sisy~~pip~~~f 188 (237)
T KOG4781|consen 123 SHREMVVIFHLG------KDLTGYPGLVHGGAIATLLDEALAMCAFLALPN-------KIGVTANL-SISYKRPIPTNHF 188 (237)
T ss_pred CCCeEEEEEecc------ccccCCCCccchHHHHHHHHHHHHHhhcccCCc-------hhheeeec-ccccCCCcccceE
Confidence 334455555443 446677899999999999999999888776553 15799999 5999999999999
Q ss_pred EEEEEEEEEEecCEEEEEEEEEEec
Q 039457 206 LELTGAVTWVGRSSMEIQLEVTQST 230 (260)
Q Consensus 206 L~l~G~Vt~tGrSSmEV~V~V~q~~ 230 (260)
+.++.++.|+-++-.-...++.+..
T Consensus 189 ~vi~t~~~~~~Grk~~~~g~l~~~~ 213 (237)
T KOG4781|consen 189 VVIRTQLDKVEGRKCKTFGELNVQS 213 (237)
T ss_pred EEEecchhhhcCcccceeeEEEEec
Confidence 9999999999887776666666654
No 36
>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ. This enzyme, FabZ, shows overlapping substrate specificity with FabA with regard to chain length in fatty acid biosynthesis. FabZ works preferentially on shorter chains and is often designated (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, although its actual specificity is broader. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains.
Probab=97.08 E-value=0.048 Score=44.41 Aligned_cols=110 Identities=14% Similarity=0.090 Sum_probs=72.0
Q ss_pred CCeEEEEEecccccccCcccCCC--CCcee-HHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCC
Q 039457 127 KSRTSILYKFSSDYILKEQYRNP--WNEMR-MGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVD 203 (260)
Q Consensus 127 DS~~~~~lp~~sd~~lrp~y~N~--~G~Lr-GGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG 203 (260)
+.+.....-++.|... +..+ ..-+. |=.++|.|-.++++.+....... ...+...+.++++++.|.+|+.+|
T Consensus 27 ~~~~~~~~~v~~~~~~---f~gHFp~~pv~Pg~l~iE~~aQ~~~~~~~~~~~~~--~~~~~~~~l~~~~~~kF~~~v~pG 101 (140)
T TIGR01750 27 GKRIVAIKNVTINEPF---FQGHFPEKPIMPGVLIVEALAQAGGVLAILSLGGE--IGKGKLVYFAGIDKAKFRRPVVPG 101 (140)
T ss_pred CCEEEEEEEcCCCCCe---ecCCCcCcCcChHHHHHHHHHHHHHHHhecccccc--CCCCcEEEEeecceeEECCccCCC
Confidence 3466666656555322 2222 12244 44566888888876554332211 112224678888999999999999
Q ss_pred cEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEE
Q 039457 204 IDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMI 249 (260)
Q Consensus 204 ~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfV 249 (260)
+.|++++++....+.-..+.+++.++ ++.+++|.++|+
T Consensus 102 d~l~i~~~i~~~~~~~~~~~~~~~~~--------g~~va~~~~~~~ 139 (140)
T TIGR01750 102 DQLILHAEFLKKRRKIGKFKGEATVD--------GKVVAEAEITFA 139 (140)
T ss_pred CEEEEEEEEEEccCCEEEEEEEEEEC--------CEEEEEEEEEEE
Confidence 99999999998887777777777543 378888888774
No 37
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=97.02 E-value=0.0058 Score=55.14 Aligned_cols=81 Identities=12% Similarity=0.038 Sum_probs=62.0
Q ss_pred CceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEec
Q 039457 151 NEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQST 230 (260)
Q Consensus 151 G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~ 230 (260)
+.+|||.++.++=. +|.+++..+ ..--++ ++.|++|..++..+.++-++++-|||....+|++.|.+
T Consensus 21 ~~~fGG~~~Aqal~----Aa~~tv~~~--------~~~~S~-h~~Fl~~~~~~~pv~~~V~~lR~GRs~~~r~V~~~Q~g 87 (271)
T TIGR00189 21 NRVFGGQVVGQALA----AASKTVPEE--------FIPHSL-HSYFVRAGDPKKPIIYDVERLRDGRSFITRRVKAVQHG 87 (271)
T ss_pred CceEccHHHHHHHH----HHHhcCCCC--------CCccee-EEEecCCCCCCCCEEEEEEEeeCCCceEEEEEEEEECC
Confidence 58999999987544 444554431 112245 57999999999999999999999999999999999965
Q ss_pred CCCCCCceEEEEEEEEEEEccC
Q 039457 231 QGTPYESRVFVFLAFWAMIGPW 252 (260)
Q Consensus 231 ~~~~tg~~~lv~tA~FTfVA~~ 252 (260)
+++.+|..+|.++.
T Consensus 88 --------~~~~~a~asf~~~~ 101 (271)
T TIGR00189 88 --------KTIFTLQASFQAEE 101 (271)
T ss_pred --------EEEEEEEEEcccCC
Confidence 67777777776443
No 38
>PF09500 YiiD_Cterm: Putative thioesterase (yiiD_Cterm); InterPro: IPR012660 This entry consists of a broadly distributed uncharacterised domain found often as a standalone protein. The member from is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an N-terminal acetyltransferase domain (IPR000182 from INTERPRO). The function of these proteins are unknown. ; PDB: 1T82_C.
Probab=96.97 E-value=0.0092 Score=50.71 Aligned_cols=110 Identities=12% Similarity=0.061 Sum_probs=66.1
Q ss_pred CCcCCCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecc
Q 039457 120 LAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKP 199 (260)
Q Consensus 120 L~~r~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~P 199 (260)
+.+....+...++..|+. .-+|++|++|||-|...+--.+.-..+-........ -.+|-+.- +|.|++|
T Consensus 20 i~v~~~~~~~l~~~APL~-------pN~N~~~T~FgGSl~slatLaGW~lv~l~l~e~~~~---~~IVi~~~-~i~Y~~P 88 (144)
T PF09500_consen 20 IKVTSYTGQRLELSAPLA-------PNINHHGTMFGGSLYSLATLAGWGLVWLQLKEAGLN---GDIVIADS-NIRYLKP 88 (144)
T ss_dssp -EEEEEETTEEEEE--SG-------GGB-TTSSB-HHHHHHHHHHHHHHHHHHHHHHHT------EEEEEEE-EEEE-S-
T ss_pred cEEEEEcCCEEEEeccCC-------CCcCCCCCcchHHHHHHHHHHHHHHHHHHHHHhCCC---CcEEEEeC-ceEEcCC
Confidence 455566677888888883 589999999999999988766654444443221100 15666664 7999999
Q ss_pred cCCCcEEEEEEEEE-------------EEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEc
Q 039457 200 IRVDIDLELTGAVT-------------WVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIG 250 (260)
Q Consensus 200 v~vG~dL~l~G~Vt-------------~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA 250 (260)
+.-+ ++++.... .-||-.+.+.++++.++ ..+++....||+
T Consensus 89 v~~d--~~A~~~~~~~~~~~~~~~~l~~~grari~l~~~i~~~~--------~~~a~f~G~yv~ 142 (144)
T PF09500_consen 89 VTGD--FTARCSLPEPEDWERFLQTLARGGRARITLEVEIYSGG--------ELAAEFTGRYVA 142 (144)
T ss_dssp --S----EEEEE-------S---GGGGCTS-EEEEEEEEEEETT--------EEEEEEEEEEEE
T ss_pred CCCC--cEEEEeccccchhHHHHHHHHcCCcEEEEEEEEEEECC--------EEEEEEEEEEEE
Confidence 9743 55555555 22788888888888754 568888888886
No 39
>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.
Probab=96.61 E-value=0.24 Score=38.92 Aligned_cols=112 Identities=13% Similarity=-0.046 Sum_probs=73.5
Q ss_pred CeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEE
Q 039457 128 SRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLE 207 (260)
Q Consensus 128 S~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~ 207 (260)
.+.....-++.|...-..|--..+.+=|=-++|.+-.++++.+....... ...+...+..+++++.|.+|+.+|+.|+
T Consensus 19 ~~~~~~~~i~~~~~~~~~hfp~~p~lPg~~~iE~~aQ~~~~~~~~~~~~~--~~~~~~~~l~~~~~~kf~~~v~pgd~l~ 96 (131)
T cd00493 19 GRIVAEKNVTPNEPFFQGHFPGDPVMPGVLGIEAMAQAAAALAGLLGLGK--GNPPRLGYLAGVRKVKFRGPVLPGDTLT 96 (131)
T ss_pred CEEEEEEecCCCChhhcccCCCCCCCCcHHHHHHHHHHHHHHHHhccccc--ccCCcEEEEEEcceeEECCCcCCCCEEE
Confidence 45555555554433222222112456666677888888777665543321 0123346788889999999999999999
Q ss_pred EEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEE
Q 039457 208 LTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMI 249 (260)
Q Consensus 208 l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfV 249 (260)
++.+++..+..-..+.+++... ++.+.++..+++
T Consensus 97 i~~~i~~~~~~~~~~~~~~~~~--------g~~v~~~~~~~~ 130 (131)
T cd00493 97 LEVELLKVRRGLGKFDGRAYVD--------GKLVAEAELMAA 130 (131)
T ss_pred EEEEEEEeeCCEEEEEEEEEEC--------CEEEEEEEEEEE
Confidence 9999999887777777777653 367777775543
No 40
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=96.51 E-value=0.035 Score=51.37 Aligned_cols=82 Identities=10% Similarity=0.009 Sum_probs=62.1
Q ss_pred CCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEe
Q 039457 150 WNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQS 229 (260)
Q Consensus 150 ~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~ 229 (260)
...+|||.++...=. +|.+.+... ..--++ .+.|++|...+..|.++-..+.-|||....+|++.|.
T Consensus 31 ~r~~fGGqv~AQal~----AA~~tv~~~--------~~~hSl-h~~Fl~pg~~~~pi~y~Ve~lRdGRSfstr~V~a~Q~ 97 (286)
T PRK10526 31 LRQVFGGQVVGQALY----AAKETVPEE--------RLVHSF-HSYFLRPGDSQKPIIYDVETLRDGNSFSARRVAAIQN 97 (286)
T ss_pred CCceechHHHHHHHH----HHHhcCCCC--------CCceEE-EEEcCCCCCCCCCEEEEEEEEeCCCceEeEEEEEEEC
Confidence 467999999987543 444544421 123344 5799999999999999999999999999999999996
Q ss_pred cCCCCCCceEEEEEEEEEEEccC
Q 039457 230 TQGTPYESRVFVFLAFWAMIGPW 252 (260)
Q Consensus 230 ~~~~~tg~~~lv~tA~FTfVA~~ 252 (260)
+ +.+.++...|-.+.
T Consensus 98 g--------~~if~~~~sF~~~e 112 (286)
T PRK10526 98 G--------KPIFYMTASFQAPE 112 (286)
T ss_pred C--------EEEEEEEEEeccCC
Confidence 5 56777777775543
No 41
>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]
Probab=96.43 E-value=0.015 Score=56.32 Aligned_cols=81 Identities=19% Similarity=0.243 Sum_probs=70.3
Q ss_pred ccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEE
Q 039457 141 ILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSM 220 (260)
Q Consensus 141 ~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSm 220 (260)
.+.|+.+|..|++--|.+.+++-+.+-..-.+.... .++--.+ .+.|++|++.++.|++..+|...||.+-
T Consensus 338 ~V~P~M~n~~Gtis~gv~~~ll~e~~qr~l~k~~~~--------niiIE~i-~iyflk~vqid~~l~I~prIl~~gR~~a 408 (432)
T COG4109 338 EVEPQMINSLGTISNGVFTELLTEVVQRVLRKKKKR--------NIIIENI-TIYFLKPVQIDSVLEIYPRILEEGRKFA 408 (432)
T ss_pred EechhhccccccchHHHHHHHHHHHHHHHHHHhcCC--------ceEEEee-eeeeecceecccEEEEeeeeeccccccc
Confidence 467999999999999999999999988666665554 3555565 5889999999999999999999999999
Q ss_pred EEEEEEEEec
Q 039457 221 EIQLEVTQST 230 (260)
Q Consensus 221 EV~V~V~q~~ 230 (260)
.+.|+++.++
T Consensus 409 ~idvei~~~~ 418 (432)
T COG4109 409 KIDVEIYHDG 418 (432)
T ss_pred eeEEEEeeCc
Confidence 9999998876
No 42
>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []. Both FabZ and FabA catalyse the dehydration of beta-hydroxyacyl acyl carrier protein (ACP) to trans 2-enoyl ACP. However, FabZ and FabA display subtle differences in substrate specificities, whereby FabA is most effective on acyl ACPs of 9-11 carbon atoms in length, while FabZ is less specific. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains. This enzyme domain has a HotDog fold.; PDB: 3D6X_F 2GLV_J 2GLM_E 2GLP_E 2GLL_C 1U1Z_F 3ESI_A 3AZB_T 3AZA_M 3AZ9_U ....
Probab=96.34 E-value=0.44 Score=38.84 Aligned_cols=102 Identities=10% Similarity=-0.029 Sum_probs=65.4
Q ss_pred CeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-ceEEEEEEccEEEecccCCCc-E
Q 039457 128 SRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRP-ILLVTASVDRMVVKKPIRVDI-D 205 (260)
Q Consensus 128 S~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P-~~iVTAsVD~I~Fl~Pv~vG~-d 205 (260)
++..+..-+.-|...-.-|-.-...+=|=-++|.+=.++++.+........ ...+ .....+.++++.|++++.+|+ .
T Consensus 25 g~~~a~~~v~~~~~~f~gHFp~~Pv~PGvl~iE~~aQ~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~kF~~~v~Pg~~~ 103 (138)
T PF07977_consen 25 GRIVARKNVTPDEPFFDGHFPGDPVMPGVLLIEAMAQAAGFLAGYSGLAEG-TGEARKVPFLAGIRNVKFRGPVYPGDKT 103 (138)
T ss_dssp EEEEEEEEE-TTSGGGGCSTTTS--B-HHHHHHHHHHHHHHHHHHHCCSSS-CCCCCEEEEEEEEEEEEE-S-B-TTE-E
T ss_pred EEEEEEEEeCCCCCEEEcCCCCCCCCCeEhHHHHHHHHHHhHhhhcccccc-CCCcceEEEeccccEEEECccEeCCCcE
Confidence 557777766655433333333334455666678888888887777754211 1111 245678899999999999999 9
Q ss_pred EEEEEEEEE---EecCEEEEEEEEEEec
Q 039457 206 LELTGAVTW---VGRSSMEIQLEVTQST 230 (260)
Q Consensus 206 L~l~G~Vt~---tGrSSmEV~V~V~q~~ 230 (260)
|+++.++.. .+.....+.+++..++
T Consensus 104 l~~~v~i~~~~~~~~~~~~~~~~~~vdg 131 (138)
T PF07977_consen 104 LRIEVEIKKIRRREGGMAIFDGTAYVDG 131 (138)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEETT
T ss_pred EEEEEEEEEeecccCCEEEEEEEEEECC
Confidence 999999999 7777777777777755
No 43
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=95.72 E-value=0.1 Score=42.01 Aligned_cols=55 Identities=11% Similarity=0.091 Sum_probs=37.9
Q ss_pred EEEEEEccEEEecccCCCcEEEEEEEEEEEecC------EEEEEEEEEEecCCCCCCceEEEEEEEEE
Q 039457 186 LVTASVDRMVVKKPIRVDIDLELTGAVTWVGRS------SMEIQLEVTQSTQGTPYESRVFVFLAFWA 247 (260)
Q Consensus 186 iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrS------SmEV~V~V~q~~~~~~tg~~~lv~tA~FT 247 (260)
+....++++.|.+|+.+|+.|.++++|+.+... .+++.++++..+ ++++.++..+
T Consensus 77 ~~~~g~~~~~f~~pv~~GD~l~~~~~v~~~~~~~~~~~~~v~~~~~~~nq~-------g~~v~~~~~~ 137 (140)
T cd03446 77 VAFYGIDNLRFLNPVFIGDTIRAEAEVVEKEEKDGEDAGVVTRRIEVVNQR-------GEVVQSGEMS 137 (140)
T ss_pred eEEeccceEEEcCCCCCCCEEEEEEEEEEecccCCCCceEEEEEEEEEcCC-------CCEEEEEEEe
Confidence 345667899999999999999999999977422 344455544332 4556666544
No 44
>PLN02868 acyl-CoA thioesterase family protein
Probab=95.54 E-value=0.073 Score=51.48 Aligned_cols=82 Identities=12% Similarity=0.064 Sum_probs=61.0
Q ss_pred CCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEe
Q 039457 150 WNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQS 229 (260)
Q Consensus 150 ~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~ 229 (260)
.+.+|||.++.+ |..+|.+++... . .+. ++ .+.|+.|..++..+.++-++.+.|||....+|++.|.
T Consensus 157 ~~~~fGG~~~aq----al~Aa~~~~~~~----~--~~~--s~-~~~Fl~~~~~~~pv~~~V~~lr~Grs~~~r~v~~~Q~ 223 (413)
T PLN02868 157 FGKVFGGQLVGQ----ALAAASKTVDPL----K--LVH--SL-HAYFLLVGDINLPIIYQVERIRDGHNFATRRVDAIQK 223 (413)
T ss_pred cccccchHHHHH----HHHHHHccCCCC----C--Cce--Ee-eeeecCCCCCCCCEEEEEEEEcCCCceEeeEEEEEEC
Confidence 478999999986 344455555321 1 122 33 4689988888888999999999999999999999986
Q ss_pred cCCCCCCceEEEEEEEEEEEccC
Q 039457 230 TQGTPYESRVFVFLAFWAMIGPW 252 (260)
Q Consensus 230 ~~~~~tg~~~lv~tA~FTfVA~~ 252 (260)
+ +.+.++..+|...+
T Consensus 224 g--------~~~~~~~~sf~~~~ 238 (413)
T PLN02868 224 G--------KVIFTLFASFQKEE 238 (413)
T ss_pred C--------eeEEEEeeccccCC
Confidence 5 56777777776543
No 45
>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
Probab=95.44 E-value=0.72 Score=46.16 Aligned_cols=112 Identities=8% Similarity=-0.031 Sum_probs=71.2
Q ss_pred CCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcE
Q 039457 126 SKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDID 205 (260)
Q Consensus 126 ~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~d 205 (260)
.+.......-++.|...-..|.--...+.|=.++|.|--++++.+...... ..+...+.++++++.|.+|+.+|+.
T Consensus 346 e~~~i~a~k~Vs~De~ff~GHFPg~PI~PGVL~IEaMAQaagil~~~~~~~----~~g~lg~LlgI~kvKF~~PV~PGDt 421 (464)
T PRK13188 346 GDTKIVGIKNVTMNEPFFQGHFPGNPVMPGVLQIEAMAQTGGILVLNTVPD----PENYSTYFMKIDKVKFRQKVVPGDT 421 (464)
T ss_pred eCCEEEEEEEcCCCcHHhhccCCCCCccccHHHHHHHHHHHHHHHhhccCC----CCCceEEEEeccEEEEcCCCCCCCE
Confidence 355666666665553221111111233555556888887777655322111 1122456788999999999999999
Q ss_pred EEEEEEEEE-EecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEE
Q 039457 206 LELTGAVTW-VGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMI 249 (260)
Q Consensus 206 L~l~G~Vt~-tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfV 249 (260)
|+++.+++. ..+..+.+.+++.+. ++++++|.++++
T Consensus 422 L~I~veI~~~~~~giv~f~g~~~vd--------GelVaeael~~~ 458 (464)
T PRK13188 422 LIFKVELLSPIRRGICQMQGKAYVN--------GKLVCEAELMAQ 458 (464)
T ss_pred EEEEEEEEEEecCCEEEEEEEEEEC--------CEEEEEEEEEEE
Confidence 999999987 334455777777643 478888888875
No 46
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=95.20 E-value=0.31 Score=37.95 Aligned_cols=68 Identities=10% Similarity=-0.094 Sum_probs=45.1
Q ss_pred CceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEec----CEEEEEEEE
Q 039457 151 NEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGR----SSMEIQLEV 226 (260)
Q Consensus 151 G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGr----SSmEV~V~V 226 (260)
-.++|+.++.++..++.. ..... + ..+... .++.|.+|+.+|+.|+++++|+.... ..+++.+++
T Consensus 43 ~i~~g~~~~~~~~~~~~~----~~~~~-----~-~~~~~~-~~~~f~~Pv~~Gd~l~~~~~v~~~~~~~~~~~v~~~~~~ 111 (127)
T cd03441 43 RIAHGMLTLSLASGLLVQ----WLPGT-----D-GANLGS-QSVRFLAPVFPGDTLRVEVEVLGKRPSKGRGVVTVRTEA 111 (127)
T ss_pred ceechHHHHHHHHhhhhh----hccCc-----c-cceeEE-eEEEEeCCcCCCCEEEEEEEEEEeeccCCCcEEEEEEEE
Confidence 358899998888765532 11110 1 233444 46899999999999999999998753 245555555
Q ss_pred EEe
Q 039457 227 TQS 229 (260)
Q Consensus 227 ~q~ 229 (260)
...
T Consensus 112 ~n~ 114 (127)
T cd03441 112 RNQ 114 (127)
T ss_pred EeC
Confidence 543
No 47
>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.
Probab=95.06 E-value=0.16 Score=41.26 Aligned_cols=57 Identities=11% Similarity=-0.032 Sum_probs=40.8
Q ss_pred EEEEccEEEecccCCCcEEEEEEEEEEEec-------CEEEEEEEEEEecCCCCCCceEEEEEEEEEEEcc
Q 039457 188 TASVDRMVVKKPIRVDIDLELTGAVTWVGR-------SSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGP 251 (260)
Q Consensus 188 TAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGr-------SSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~ 251 (260)
-..++++.|.+|+.+|+.|.++++|+..-. .-+++.+++...+ +++++++..+...+
T Consensus 80 ~~~~~~~~f~~pv~~GDtl~~~~~v~~~~~~~~~~~~~~v~~~~~~~nq~-------g~~V~~~~~~~~~~ 143 (146)
T cd03451 80 NLGYDEVRFPAPVFHGDTLYAESEVLSKRESKSRPDAGIVTVRTVGYNQD-------GEPVLSFERTALVP 143 (146)
T ss_pred ccCccEEEecCCCCCCCEEEEEEEEEEEecCCCCCCCeEEEEEEEEECCC-------CCEEEEEEehhEEE
Confidence 345568999999999999999999997642 2455555554322 46788887776543
No 48
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=94.85 E-value=0.63 Score=37.03 Aligned_cols=75 Identities=13% Similarity=0.009 Sum_probs=46.6
Q ss_pred eeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecC-EEEEEEEEEEecC
Q 039457 153 MRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRS-SMEIQLEVTQSTQ 231 (260)
Q Consensus 153 LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrS-SmEV~V~V~q~~~ 231 (260)
+||..++.++..+.. ...+. ....... ++.|.+|+.+|+.|+++++|+..... -+++.+++...+
T Consensus 46 a~G~~~~~~~~~~~~----~~~~~--------~~~~~~~-~~rf~~pv~~Gdtl~~~~~v~~~~~~~~v~~~~~~~nq~- 111 (123)
T cd03455 46 VNGPTLAGLVIRYVT----DWAGP--------DARVKSF-AFRLGAPLYAGDTLRFGGRVTAKRDDEVVTVELWARNSE- 111 (123)
T ss_pred EEHHHHHHHHHHHHH----HccCC--------cceEEEE-EEEeeccccCCCEEEEEEEEEeeccCcEEEEEEEEEcCC-
Confidence 678777777765432 22221 1123344 68999999999999999999976444 344444444332
Q ss_pred CCCCCceEEEEEEEEE
Q 039457 232 GTPYESRVFVFLAFWA 247 (260)
Q Consensus 232 ~~~tg~~~lv~tA~FT 247 (260)
++.+.++..+
T Consensus 112 ------G~~v~~g~a~ 121 (123)
T cd03455 112 ------GDHVMAGTAT 121 (123)
T ss_pred ------CCEEEeEEEE
Confidence 3556666554
No 49
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=94.81 E-value=0.16 Score=43.24 Aligned_cols=53 Identities=21% Similarity=0.133 Sum_probs=38.7
Q ss_pred ccEEEecccCCCcEEEEEEEEEEE----ecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEcc
Q 039457 192 DRMVVKKPIRVDIDLELTGAVTWV----GRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGP 251 (260)
Q Consensus 192 D~I~Fl~Pv~vG~dL~l~G~Vt~t----GrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~ 251 (260)
+++.|++|+.+|+.|.++.+|+.+ ++--+.+.++++..+ .+++.++.-+++.+
T Consensus 89 q~~~f~~PV~~GDtL~~~~eV~~~~~~~~~giv~~~~~v~Nq~-------Ge~V~~~~~~~~~r 145 (159)
T PRK13692 89 QVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNIVTNEE-------GDVVQETYTTLAGR 145 (159)
T ss_pred eEEEEeCCccCCCEEEEEEEEEEEEEcCCceEEEEEEEEEcCC-------CCEEEEEEEEEEEe
Confidence 478999999999999999999754 223455555555332 46788888877765
No 50
>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ). This group appears to lack the conserved active site histidine of FabA and FabZ.
Probab=94.35 E-value=2.5 Score=34.87 Aligned_cols=92 Identities=8% Similarity=-0.087 Sum_probs=65.6
Q ss_pred CCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCC-CcEEEEEEEEEEEec-CEEEEEEEEE
Q 039457 150 WNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRV-DIDLELTGAVTWVGR-SSMEIQLEVT 227 (260)
Q Consensus 150 ~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~v-G~dL~l~G~Vt~tGr-SSmEV~V~V~ 227 (260)
.+.+-|=-++|.|--+++..+....... + ..+....-++++++.|.+++.+ |+.|.++.+.+...+ .-..+.++++
T Consensus 44 ~~~~P~~l~iE~mAQa~a~~~g~~~~~~-~-~~~~~g~l~~i~~~~f~~~v~p~Gd~l~i~~~~~~~~~~~~~~~~~~~~ 121 (138)
T cd01289 44 HGRLPAWVGIEYMAQAIAAHGGLLARQQ-G-NPPRPGFLLGSRKYEAHVDRFDLGSTLLIVVAELLQGDSGLGVFECTIE 121 (138)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHhc-C-CCCCcEEEEEEEEEEEEcceeCCCCeeEEEeeeeeeCCCcEEEEEEEEE
Confidence 3677788888888887766553322110 0 1122457888999999999766 999999999998875 7777777776
Q ss_pred EecCCCCCCceEEEEEEEEEEEcc
Q 039457 228 QSTQGTPYESRVFVFLAFWAMIGP 251 (260)
Q Consensus 228 q~~~~~~tg~~~lv~tA~FTfVA~ 251 (260)
.++ +++++|.++.+-+
T Consensus 122 v~~--------~~va~a~l~~~~p 137 (138)
T cd01289 122 DQG--------GVLASGRLNVYQP 137 (138)
T ss_pred ECC--------EEEEEEEEEEEcC
Confidence 643 7899999887643
No 51
>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]
Probab=94.22 E-value=1.5 Score=37.45 Aligned_cols=88 Identities=19% Similarity=0.069 Sum_probs=59.2
Q ss_pred ceeHHHHHH-HHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEec
Q 039457 152 EMRMGKLLE-DLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQST 230 (260)
Q Consensus 152 ~LrGGrLLe-~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~ 230 (260)
-+..|.|+- .|=.++|..+.+..... . .....+++|+..|++|+.||+.+.++.+++..++.-+.+.--...-+
T Consensus 56 PimPGVLileamaQ~~g~~~~~~~~~~---~--~~~~~~gid~~kF~~~V~PGd~l~l~~~~~~~~~~~~~~~~~~a~Vd 130 (147)
T COG0764 56 PIMPGVLILEAMAQAAGFLLGWLLGNK---G--KLGYFLGIDNAKFKRPVLPGDQLELEVKLLKSRRLGIGKAKGVATVD 130 (147)
T ss_pred CCcchhHHHHHHHHHHHHHHhccccCC---c--cEEEEEEecceeecCccCCCCEEEEEEEEEEecccceEEEEEEEEEC
Confidence 377777654 45555555555543321 0 25678999999999999999999999999988855554433222222
Q ss_pred CCCCCCceEEEEEEEEEEEcc
Q 039457 231 QGTPYESRVFVFLAFWAMIGP 251 (260)
Q Consensus 231 ~~~~tg~~~lv~tA~FTfVA~ 251 (260)
.+++.+|.+.++..
T Consensus 131 -------g~~v~~a~~~~~~~ 144 (147)
T COG0764 131 -------GKVVAEAELLFAGV 144 (147)
T ss_pred -------CEEEEEEEEEEEEe
Confidence 36699999988753
No 52
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=94.09 E-value=1.4 Score=35.92 Aligned_cols=52 Identities=10% Similarity=-0.041 Sum_probs=37.5
Q ss_pred cEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEc
Q 039457 193 RMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIG 250 (260)
Q Consensus 193 ~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA 250 (260)
++.|++|+.+|+.|+++++|+..-.-.+.+.+++...+ .++.+.++..+..+
T Consensus 74 ~~rf~~PV~~gdtl~~~~~v~~~~~~~~~~~~~~~nq~------~g~~V~~g~~~v~~ 125 (126)
T cd03447 74 TASFVGMVLPNDELEVRLEHVGMVDGRKVIKVEARNEE------TGELVLRGEAEVEQ 125 (126)
T ss_pred EEEEcccCcCCCEEEEEEEEEEEeCCeEEEEEEEEECC------CCCEEEEEEEEEeC
Confidence 78999999999999999999987555555555554432 13567777766544
No 53
>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=93.96 E-value=3.4 Score=34.98 Aligned_cols=110 Identities=9% Similarity=-0.107 Sum_probs=67.4
Q ss_pred CeEEEEEecccccccCcccCC----CCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCC
Q 039457 128 SRTSILYKFSSDYILKEQYRN----PWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVD 203 (260)
Q Consensus 128 S~~~~~lp~~sd~~lrp~y~N----~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG 203 (260)
+++.....++.|. .|.. ....+=|=-++|-|--++++.+............+...+.+.++++.|.+++.+|
T Consensus 27 g~i~a~k~v~~~e----~ff~gHFp~~pvmPG~L~iEamaQ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~kfr~~v~Pg 102 (150)
T cd01287 27 GYLRAEKDIDPDD----WFFPCHFHGDPVMPGSLGLEAMIQLLQFYLIWLGLGTGVDNPRFQGAPGGPGEWKYRGQITPH 102 (150)
T ss_pred cEEEEEEEcCCCC----ceEcCCCCCCCcCchHHHHHHHHHHHHHHHhhcccccccCcccceeEeccceEEEECccCcCC
Confidence 3566665555443 2333 1122334445666766666665543221000111224567889999999999999
Q ss_pred c-EEEEEEEEEEEec----CEEEEEEEEEEecCCCCCCceEEEEEEEEEEE
Q 039457 204 I-DLELTGAVTWVGR----SSMEIQLEVTQSTQGTPYESRVFVFLAFWAMI 249 (260)
Q Consensus 204 ~-dL~l~G~Vt~tGr----SSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfV 249 (260)
+ .|.++.+++..++ .-+.+.+.++.++ +.+.+|...=|
T Consensus 103 d~~l~~e~~i~~~~~~~~~~~~~~~~~~~vdg--------~~v~~a~~~~~ 145 (150)
T cd01287 103 NKKVTYEVHIKEVGRDGPRPYIIADASLWVDG--------LRIYEAKDIAV 145 (150)
T ss_pred CEEEEEEEEEEEEEccCCccEEEEEEEEEECC--------EEEEEEEccEE
Confidence 8 7999999999975 6666667666644 67777765433
No 54
>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function. YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=93.71 E-value=0.39 Score=38.86 Aligned_cols=55 Identities=15% Similarity=0.110 Sum_probs=37.9
Q ss_pred EEEEEccEEEecccCCCcEEEEEEEEEEEe-------cCEEEEEEEEEEecCCCCCCceEEEEEEEEEE
Q 039457 187 VTASVDRMVVKKPIRVDIDLELTGAVTWVG-------RSSMEIQLEVTQSTQGTPYESRVFVFLAFWAM 248 (260)
Q Consensus 187 VTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tG-------rSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTf 248 (260)
+....+++.|.+|+.+|+.|.++++|..+- +.-+.+.+++...+ ++++.++..+.
T Consensus 76 ~~~~~~~~~f~~pv~~Gd~l~~~~~v~~~~~~~~~~~~~~v~~~~~~~nq~-------g~~v~~~~~~~ 137 (140)
T cd03454 76 GSPGIDELRWPRPVRPGDTLSVEVEVLDKRPSRSRPDRGIVTLRSETLNQR-------GEVVLTFEATV 137 (140)
T ss_pred EEcceeeeEeCCCCCCCCEEEEEEEEEEEeecCCCCCCeEEEEEEEEEcCC-------CCEEEEEEehh
Confidence 344556899999999999999999998763 22445555554333 45677766554
No 55
>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional
Probab=93.64 E-value=0.4 Score=41.25 Aligned_cols=55 Identities=18% Similarity=0.188 Sum_probs=39.3
Q ss_pred ccEEEecccCCCcEEEEEEEEEEEe----cCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEccCh
Q 039457 192 DRMVVKKPIRVDIDLELTGAVTWVG----RSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPWS 253 (260)
Q Consensus 192 D~I~Fl~Pv~vG~dL~l~G~Vt~tG----rSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~~~ 253 (260)
.++.|++|+.+|+.|.++.+|..+- +..+.+.+++... .++++.++..+++.+.+
T Consensus 89 q~~~f~rPV~~GDtL~~~~~V~~~~~~~~~g~V~~~~~~~NQ-------~Ge~V~~~~~~~~~~~~ 147 (166)
T PRK13691 89 QRFVFHKPVLAGDKLWARMDIHSVDERFGADIVVTRNVCTND-------DGELVMEAYTTLMGQQG 147 (166)
T ss_pred eEEEEeCCcCCCCEEEEEEEEEEEEEcCCCcEEEEEEEEECC-------CCCEEEEEEEEEEEecC
Confidence 5788999999999999999998762 2334444444432 35678888888876553
No 56
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=93.24 E-value=0.5 Score=38.95 Aligned_cols=52 Identities=10% Similarity=-0.006 Sum_probs=36.9
Q ss_pred EEEccEEEecccCCCcEEEEEEEEEEEec------CEEEEEEEEEEecCCCCCCceEEEEEEEEE
Q 039457 189 ASVDRMVVKKPIRVDIDLELTGAVTWVGR------SSMEIQLEVTQSTQGTPYESRVFVFLAFWA 247 (260)
Q Consensus 189 AsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGr------SSmEV~V~V~q~~~~~~tg~~~lv~tA~FT 247 (260)
...+++.|.+|+.+|+.|.++++|+.+-. -.+.+.+++...+ .+.+.++..+
T Consensus 78 ~g~~~~rf~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~nq~-------g~~V~~~~~~ 135 (142)
T cd03452 78 YGLENLRFLEPVYPGDTIQVRLTCKRKIPRDGQDYGVVRWDAEVTNQN-------GELVASYDIL 135 (142)
T ss_pred eccceEEECCCCCCCCEEEEEEEEEEEeecCCCCcEEEEEEEEEEecC-------CCEEEEEEeh
Confidence 44679999999999999999999988732 2455666665333 4556666543
No 57
>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.
Probab=93.22 E-value=0.58 Score=39.46 Aligned_cols=27 Identities=15% Similarity=0.137 Sum_probs=24.1
Q ss_pred EEEccEEEecccCCCcEEEEEEEEEEE
Q 039457 189 ASVDRMVVKKPIRVDIDLELTGAVTWV 215 (260)
Q Consensus 189 AsVD~I~Fl~Pv~vG~dL~l~G~Vt~t 215 (260)
...+++.|++|+.+||.|+++++|..+
T Consensus 87 ~g~~~~rF~~PV~~GDtl~~~~~V~~~ 113 (149)
T cd03450 87 YGLDKVRFPAPVPVGSRVRGRFTLLSV 113 (149)
T ss_pred eeccEEEeCcceeCCcEEEEEEEEEEE
Confidence 345689999999999999999999987
No 58
>PLN02370 acyl-ACP thioesterase
Probab=93.10 E-value=1.2 Score=44.02 Aligned_cols=106 Identities=10% Similarity=0.047 Sum_probs=78.7
Q ss_pred ccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcC-------CCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEE
Q 039457 139 DYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCC-------NDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGA 211 (260)
Q Consensus 139 d~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~-------~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~ 211 (260)
+..|+...++..|.+....||.+|-++|..-+....- .+.....-+..|-+.. .|+|.++...|+.|++.-+
T Consensus 143 ~f~Ir~yEvD~~g~lsl~~L~n~lQd~A~~Hs~~lGll~~Gfg~~~~m~~~gl~WVLtr~-~I~~~R~P~~gD~V~V~Tw 221 (419)
T PLN02370 143 NFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMSKRNLIWVVTRM-QVLVDRYPTWGDVVQVDTW 221 (419)
T ss_pred EEEEeeEEECCCCCCCHHHHHHHHHHHHHHHHHHhCccccccccHHHHHhCCceEEEEEE-EEEeCcCCCCCCEEEEEEE
Confidence 4567888899999999999999999887755543321 0000112335677777 5999999999999999999
Q ss_pred EEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEcc
Q 039457 212 VTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGP 251 (260)
Q Consensus 212 Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~ 251 (260)
+...|+.++.-.-+++..+ .+++++.|.-++|..
T Consensus 222 v~~~~k~~~~Rdf~I~D~~------~Ge~la~A~SvWV~m 255 (419)
T PLN02370 222 VSASGKNGMRRDWLVRDCK------TGETLTRASSVWVMM 255 (419)
T ss_pred EeeCCCCEEEEEEEEEECC------CCeEEEEEEEEEEEE
Confidence 9999999998888887653 146677777766643
No 59
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=92.57 E-value=1.1 Score=35.79 Aligned_cols=67 Identities=13% Similarity=-0.059 Sum_probs=41.3
Q ss_pred ceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEe
Q 039457 152 EMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQS 229 (260)
Q Consensus 152 ~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~ 229 (260)
.+||-.++.++-.+ .+....... ...... .++.|.+|+.+|+.|.+.++|+..-...-.+.+++...
T Consensus 52 ivhG~~~~a~~~~~---~~~~~~~~~-------~~~~~~-~~~rF~~PV~~gdtl~~~~~v~~~~~~~~~~~v~~~~~ 118 (122)
T PF01575_consen 52 IVHGMLTLALASGL---LGDWLGPNP-------PARLGR-FNVRFRAPVFPGDTLTAEVEVTEKREGKERVRVTVTVE 118 (122)
T ss_dssp B-BHHHHHHHHHHH---HHHHHSTTE-------CEEEEE-EEEEESS--BTTEEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred EEccHHHHHHHHHH---HHHhccCcc-------ceEEEE-EEEEEeccccCCCEEEEEEEEEEEEEcCceEEEEEEEE
Confidence 47888887766433 333333210 123444 47899999999999999999998765555555555443
No 60
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=92.46 E-value=3.6 Score=32.88 Aligned_cols=38 Identities=24% Similarity=0.370 Sum_probs=29.2
Q ss_pred cEEEecccCCCcEEEEEEEEEEE----ecCEEEEEEEEEEec
Q 039457 193 RMVVKKPIRVDIDLELTGAVTWV----GRSSMEIQLEVTQST 230 (260)
Q Consensus 193 ~I~Fl~Pv~vG~dL~l~G~Vt~t----GrSSmEV~V~V~q~~ 230 (260)
++.|++|+.+|+.|.++++|+.. |+..+.+.+++...+
T Consensus 74 ~~rf~~Pv~~Gdtl~~~~~v~~~~~~~~~~~v~~~~~~~nq~ 115 (127)
T cd03453 74 GVRFTKPVPVPDTLTCTGIVVEKTVADGEDALTVTVDATDQA 115 (127)
T ss_pred EEEECCcCcCCCEEEEEEEEEEEEecCCCcEEEEEEEEEEcC
Confidence 47999999999999999999864 334566666666544
No 61
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=89.15 E-value=5.9 Score=39.33 Aligned_cols=57 Identities=16% Similarity=0.236 Sum_probs=38.3
Q ss_pred EEEEEccEEEecccCCCcEEEEEEEEEEEe--cCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEcc
Q 039457 187 VTASVDRMVVKKPIRVDIDLELTGAVTWVG--RSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGP 251 (260)
Q Consensus 187 VTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tG--rSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~ 251 (260)
+... .++.|.+|+.+|+.|+++++|+... +.-+.+.+++...+ ++.+.++..+++.+
T Consensus 84 ~~~~-~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~v~~~~~~~nq~-------G~~V~~g~~~~l~~ 142 (466)
T PRK08190 84 IYLG-QSLRFRRPVRIGDTLTVTVTVREKDPEKRIVVLDCRCTNQD-------GEVVITGTAEVIAP 142 (466)
T ss_pred EEEE-EEEEEeCCcCCCCEEEEEEEEEEEECCCCEEEEEEEEEeCC-------CCEEEEEEEEeecc
Confidence 3344 4799999999999999999998763 33444555554433 45666666665443
No 62
>COG5496 Predicted thioesterase [General function prediction only]
Probab=89.07 E-value=12 Score=31.64 Aligned_cols=87 Identities=5% Similarity=-0.086 Sum_probs=66.5
Q ss_pred CceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEc-cEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEe
Q 039457 151 NEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVD-RMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQS 229 (260)
Q Consensus 151 G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD-~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~ 229 (260)
+.+--+.|+.++..++.-++.+|...+ ..|...+ .+.-+.|+.+|..+++..++..+-+.-+...+++. +
T Consensus 29 ~VlATp~mi~~~E~a~~el~~~~Ld~g--------~ttVG~ev~vrHla~~~~G~~V~i~~~l~~v~Gr~v~f~i~a~-~ 99 (130)
T COG5496 29 NVLATPAMIGFMENASYELLQPYLDNG--------ETTVGTEVLVRHLAATPPGLTVTIGARLEKVEGRKVKFRIIAM-E 99 (130)
T ss_pred ceeehHHHHHHHHHHHHHHHHhhCcCC--------cceeeEEEEeeeccCCCCCCeEEEEEEEEEEeccEEEEEEEEe-e
Confidence 345678999999999999999998763 2344442 34456899999999999999999999888888887 3
Q ss_pred cCCCCCCceEEEEEEEEEEEccCh
Q 039457 230 TQGTPYESRVFVFLAFWAMIGPWS 253 (260)
Q Consensus 230 ~~~~~tg~~~lv~tA~FTfVA~~~ 253 (260)
+ ...+.++++|=+-.++
T Consensus 100 ~-------~~~Ig~g~h~R~iv~~ 116 (130)
T COG5496 100 G-------GDKIGEGTHTRVIVPR 116 (130)
T ss_pred C-------CcEEeeeEEEEEEecH
Confidence 3 3678888887665544
No 63
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=84.71 E-value=5.1 Score=37.95 Aligned_cols=85 Identities=12% Similarity=0.088 Sum_probs=61.6
Q ss_pred CcccCCCC-CceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEEE
Q 039457 143 KEQYRNPW-NEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSME 221 (260)
Q Consensus 143 rp~y~N~~-G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmE 221 (260)
+..+.+.. -.+|||.++...= .+|.+....+ ++|.- + ...|++|..+...|+..-+..+=||+-..
T Consensus 23 rG~s~~~g~~~vFGGqvvaQAL----~Aa~~TV~~~-------r~vhS-l-h~yFl~pgd~~~pi~y~Ve~lRdG~sfs~ 89 (289)
T COG1946 23 RGSSPDSGLRRVFGGQVVAQAL----VAALRTVPED-------RVVHS-L-HSYFLRPGDPEQPIIYDVERLRDGRSFST 89 (289)
T ss_pred ecCCCCcCCccccccchHHHHH----HHHHhhcCCC-------CCcce-e-hhhhcCCCCcCCceEEEEEeccCCCceEe
Confidence 44455543 4599999987743 4455555532 33333 3 34899999999999999999999999999
Q ss_pred EEEEEEEecCCCCCCceEEEEEEEEEE
Q 039457 222 IQLEVTQSTQGTPYESRVFVFLAFWAM 248 (260)
Q Consensus 222 V~V~V~q~~~~~~tg~~~lv~tA~FTf 248 (260)
.+|.++|.+ +++..+...|
T Consensus 90 rrV~aiQ~g--------~~If~~~ASF 108 (289)
T COG1946 90 RRVDAIQHG--------KLIFSATASF 108 (289)
T ss_pred EEEEEEECC--------EEEEEEEeec
Confidence 999999976 5555555555
No 64
>KOG3016 consensus Acyl-CoA thioesterase [Lipid transport and metabolism]
Probab=84.26 E-value=8.2 Score=36.66 Aligned_cols=81 Identities=15% Similarity=0.055 Sum_probs=62.4
Q ss_pred CCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEE
Q 039457 148 NPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVT 227 (260)
Q Consensus 148 N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~ 227 (260)
++.+.+|||.++...=.+| .+-.+. .++--++ +..|.+...+..-|...-+-++-||+=..=+|++.
T Consensus 35 ~~~~~~fGG~i~sQaLaAA----~~TV~e--------~f~p~Sl-H~YFI~~gd~~~pI~Y~V~rirdGr~F~~R~V~Av 101 (294)
T KOG3016|consen 35 IPSNHAYGGQIASQALAAA----SKTVEE--------MFIPHSL-HCYFILVGDPNIPIIYDVKRIRDGRNFATRSVDAV 101 (294)
T ss_pred ccCcccccceehHHHHHHH----Hhcccc--------cccccee-eeeeeecCCCCCceEEEeeeecCCceeEEEEEEEE
Confidence 5678899999998865443 232332 3455555 57899988888889999999999999999999999
Q ss_pred EecCCCCCCceEEEEEEEEEEE
Q 039457 228 QSTQGTPYESRVFVFLAFWAMI 249 (260)
Q Consensus 228 q~~~~~~tg~~~lv~tA~FTfV 249 (260)
|++ +++.++.+.|-
T Consensus 102 Q~~--------k~If~~qiSF~ 115 (294)
T KOG3016|consen 102 QKG--------KTIFTLQISFQ 115 (294)
T ss_pred ECC--------eEEEEEEEEEc
Confidence 987 67777777775
No 65
>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A.
Probab=82.11 E-value=7.3 Score=30.97 Aligned_cols=33 Identities=27% Similarity=0.227 Sum_probs=25.5
Q ss_pred eEEEEEEccEEEecccCCCcEEEEEEEEEEEecC
Q 039457 185 LLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRS 218 (260)
Q Consensus 185 ~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrS 218 (260)
.++=+.- ++.|.+|+++|+.|+++++|+-+-..
T Consensus 74 ~~vh~~~-~~~~h~Pl~~Gd~l~~~~~v~~v~~k 106 (132)
T PF13452_consen 74 RLVHGEQ-DIEFHRPLRPGDTLTATSRVTDVYDK 106 (132)
T ss_dssp GEEEEEE-EEEESS--BSSEEEEEEEEEEEEEEE
T ss_pred hEEecCc-EEEEeCCCCCCCEEEEEEEEEEEEEe
Confidence 5666675 69999999999999999999887543
No 66
>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a Hotdog domain [].
Probab=81.51 E-value=26 Score=28.18 Aligned_cols=108 Identities=15% Similarity=0.118 Sum_probs=70.3
Q ss_pred CCeEEEEEecccccccCcccCC-CCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcE
Q 039457 127 KSRTSILYKFSSDYILKEQYRN-PWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDID 205 (260)
Q Consensus 127 DS~~~~~lp~~sd~~lrp~y~N-~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~d 205 (260)
++...+.+-+..+. +-|.. +.+.+-|=.|+|-+=-++-.+++.+.+.+. +..++-.++ ++.|.+++..+.-
T Consensus 19 ~~~~~~~~~~p~~h---~~~~dh~~dh~~gmll~Ea~RQa~~~~~h~~~~vp~----~~~~~~~~l-~~~f~~~~e~~~P 90 (132)
T PF03756_consen 19 DGRFRARLQWPRSH---PFFFDHPGDHVPGMLLLEAARQAGIALAHRFYGVPL----DHQFVLTSL-DFTFSRFAELDVP 90 (132)
T ss_pred CCEEEEEEEcCCCC---ccccCCCCCccChHHHHHHHHHHHHHhhccccCCCC----CceEEEEEE-EEEEccccccCCC
Confidence 44455544443332 22223 334566777788888888777777765432 224666676 4788888776667
Q ss_pred EEEEEEEEEEec-----CEEEEEEEEEEecCCCCCCceEEEEEEEEEEEc
Q 039457 206 LELTGAVTWVGR-----SSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIG 250 (260)
Q Consensus 206 L~l~G~Vt~tGr-----SSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA 250 (260)
+.++..+..... +.+.+.+++.|.+ +.++++.++|.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~v~~~q~g--------~~~a~~~~~~tc 132 (132)
T PF03756_consen 91 ADLTVRITCRDRRGGRPRGLRFRVTVSQGG--------RVVATASMTFTC 132 (132)
T ss_pred EEEEEEEEeccccCCccceEEEEEEEEECC--------EEEEEEEEEEEC
Confidence 777777776544 4788888888865 788888888754
No 67
>COG2030 MaoC Acyl dehydratase [Lipid metabolism]
Probab=81.40 E-value=31 Score=29.05 Aligned_cols=30 Identities=17% Similarity=-0.012 Sum_probs=25.8
Q ss_pred EEEEEccEEEecccCCCcEEEEEEEEEEEe
Q 039457 187 VTASVDRMVVKKPIRVDIDLELTGAVTWVG 216 (260)
Q Consensus 187 VTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tG 216 (260)
+-...|++.|.+|+.+|+.|+.+..|...-
T Consensus 94 ~~~g~~~vRF~~PV~~Gdtl~~~~~v~~~~ 123 (159)
T COG2030 94 ANLGGDEVRFVKPVFPGDTLRARVEVLDKR 123 (159)
T ss_pred eeccccceEecCCCCCCCEEEEEEEEEEee
Confidence 456678999999999999999999998663
No 68
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=81.02 E-value=27 Score=31.67 Aligned_cols=103 Identities=10% Similarity=0.024 Sum_probs=66.1
Q ss_pred cccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCC-------CCCCceEEEEEEccEEEecccCCCcEEEEEEEE
Q 039457 140 YILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDG-------ATRPILLVTASVDRMVVKKPIRVDIDLELTGAV 212 (260)
Q Consensus 140 ~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~-------~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~V 212 (260)
..|+..+++..|.+..-.|+.++=++|+.-+....-..+. ...-+..|.... .|++.++..-|+.|+++-.+
T Consensus 8 ~~v~~~e~d~~~~l~l~~l~~~~qe~a~~h~~~lG~~~~~~~~~~~l~~~~~~Wvl~r~-~i~i~r~P~~~e~i~i~Tw~ 86 (261)
T PF01643_consen 8 FTVRYYECDPNGRLKLSALLNYFQEAATEHAESLGFGMDYFGSTPELKKQGLAWVLSRY-QIEIHRYPRWGEKITIETWP 86 (261)
T ss_dssp EE--GGGB-TTSBB-HHHHHHHHHHHHHHHHHHTT-SHHH------HHCTTEEEEEEEE-EEEESS--BTT-EEEEEEEE
T ss_pred EEEcceeeCCCCCCCHHHHHHHHHHHHHHHHHHhCCCcccchhhhhHhhcCcEEEEEEE-EEEEEecCCCCCEEEEEEEe
Confidence 3567889999999999999999999988666554311100 011124555555 58899999999999999999
Q ss_pred EEEecCEEEEEEEEEE-ecCCCCCCceEEEEEEEEEEEc
Q 039457 213 TWVGRSSMEIQLEVTQ-STQGTPYESRVFVFLAFWAMIG 250 (260)
Q Consensus 213 t~tGrSSmEV~V~V~q-~~~~~~tg~~~lv~tA~FTfVA 250 (260)
...++-.+.=..+++. ++ +++++.|.-.+|.
T Consensus 87 ~~~~~~~~~R~f~i~d~~~-------G~~l~~a~s~Wvl 118 (261)
T PF01643_consen 87 SGFKRFFAYRDFEIYDAED-------GELLARATSIWVL 118 (261)
T ss_dssp EEE-SSEEEEEEEEE--TT-------S-EEEEEEEEEEE
T ss_pred ccCCCcEEEEEEEEEECCC-------CcEEEEEEEEEEE
Confidence 9999988877777776 33 3566666666654
No 69
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=80.24 E-value=23 Score=27.77 Aligned_cols=75 Identities=15% Similarity=0.016 Sum_probs=57.4
Q ss_pred ceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEc-cEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEec
Q 039457 152 EMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVD-RMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQST 230 (260)
Q Consensus 152 ~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD-~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~ 230 (260)
.++-.-|.-..|......+.++.+.... .....+++| .|.|..|....+.+..+.+..+.|.--...+.+++.++
T Consensus 16 ~~~~a~lA~~SD~~~l~~~~~~~~~~~~----~~~~~aSldhsi~Fh~~~~~~~W~l~~~~~~~~~~gr~~~~~~l~~~~ 91 (104)
T cd03444 16 RLHAAALAYLSDSLLLGTALRPHGLPLF----DASASASLDHAIWFHRPFRADDWLLYEQRSPRAGNGRGLVEGRIFTRD 91 (104)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcc----cCcceEeeeEEEEEeCCCCCCceEEEEEECccccCCeeEEEEEEECCC
Confidence 3667777888888877667666554210 124567777 78899999988999999999999988888899998876
No 70
>PLN02864 enoyl-CoA hydratase
Probab=76.30 E-value=15 Score=34.66 Aligned_cols=54 Identities=11% Similarity=0.137 Sum_probs=38.1
Q ss_pred cEEEecccCCCcEEEEEEEEEEE---ecCE-EEEEEEEEEecCCCCCCceEEEEEEEEEEEccC
Q 039457 193 RMVVKKPIRVDIDLELTGAVTWV---GRSS-MEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPW 252 (260)
Q Consensus 193 ~I~Fl~Pv~vG~dL~l~G~Vt~t---GrSS-mEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~~ 252 (260)
+|.+.+|+++|+.|.++++|+.+ |+-. +++...+.... ..+++.+...|++.+-
T Consensus 100 ~i~~~rPlp~~~~l~~~~~v~~v~dkG~ga~v~~~~~~~d~~------~Ge~v~t~~st~~~Rg 157 (310)
T PLN02864 100 YIEIYKPIPSSASVRNKVSIAGLHDKGKAAILELETLSYEKD------SGELLCMNRSTIFLRG 157 (310)
T ss_pred eEEEECCCCCCCEEEEEEEEEEEEeCCCcEEEEEEEEEEeCC------CCcEEEEEEEEEEEeC
Confidence 68999999999999999999877 3322 34444444322 2467888888887763
No 71
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=76.28 E-value=7.1 Score=40.51 Aligned_cols=52 Identities=10% Similarity=0.059 Sum_probs=36.5
Q ss_pred EEEccEEEecccCCCcEEEEEEEEEEEec------CEEEEEEEEEEecCCCCCCceEEEEEEEEE
Q 039457 189 ASVDRMVVKKPIRVDIDLELTGAVTWVGR------SSMEIQLEVTQSTQGTPYESRVFVFLAFWA 247 (260)
Q Consensus 189 AsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGr------SSmEV~V~V~q~~~~~~tg~~~lv~tA~FT 247 (260)
..++++.|.+|+.+|+.|+++++|+.+-. .-+++.+++...+ ++.+.++..+
T Consensus 613 ~g~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~nq~-------G~~V~~~~~~ 670 (675)
T PRK11563 613 YGLENLRFLTPVKPGDTIQVRLTCKRKTPRRQAPYGVVRWDVEVTNQD-------GELVATYDIL 670 (675)
T ss_pred cccceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEECC-------CCEEEEEEEH
Confidence 34578999999999999999999998732 1355555555333 4566665543
No 72
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=74.67 E-value=8.3 Score=40.10 Aligned_cols=51 Identities=12% Similarity=0.014 Sum_probs=35.5
Q ss_pred EEccEEEecccCCCcEEEEEEEEEEEecC------EEEEEEEEEEecCCCCCCceEEEEEEEEE
Q 039457 190 SVDRMVVKKPIRVDIDLELTGAVTWVGRS------SMEIQLEVTQSTQGTPYESRVFVFLAFWA 247 (260)
Q Consensus 190 sVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrS------SmEV~V~V~q~~~~~~tg~~~lv~tA~FT 247 (260)
..+++.|++|+.+||.|+++++|+.+-.+ .+++.+++...+ .+.+.++..+
T Consensus 602 g~~~~rF~~PV~~GDtl~~~~~V~e~~~~~~~~~g~v~~~~~v~nq~-------G~~Vl~~~~~ 658 (663)
T TIGR02278 602 GLENLRFLEPVGPGDTIQVRLTVKRKTPRDEKTYGVVEWAAEVVNQN-------GEPVATYDVL 658 (663)
T ss_pred ccceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEcCC-------CCEEEEEEEH
Confidence 34689999999999999999999866311 355555555332 4566666553
No 73
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=74.52 E-value=39 Score=27.30 Aligned_cols=32 Identities=16% Similarity=0.113 Sum_probs=24.0
Q ss_pred cEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEE
Q 039457 193 RMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVT 227 (260)
Q Consensus 193 ~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~ 227 (260)
++.|.+|+.+|+.|+++.++ .|+ .+.+.+++.
T Consensus 76 ~~rF~~PV~~gDtl~~~~~~--~~~-~v~~~~~~~ 107 (122)
T cd03448 76 KVRFSSPVFPGETLRTEMWK--EGN-RVIFQTKVV 107 (122)
T ss_pred EEEEcCCccCCCEEEEEEEE--eCC-EEEEEEEEc
Confidence 68999999999999997774 454 455555553
No 74
>PRK13693 (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional
Probab=74.13 E-value=23 Score=29.34 Aligned_cols=38 Identities=24% Similarity=0.276 Sum_probs=27.8
Q ss_pred cEEEecccCCC-----cEEEEEEEEEEE--ecCEEEEEEEEEEec
Q 039457 193 RMVVKKPIRVD-----IDLELTGAVTWV--GRSSMEIQLEVTQST 230 (260)
Q Consensus 193 ~I~Fl~Pv~vG-----~dL~l~G~Vt~t--GrSSmEV~V~V~q~~ 230 (260)
++.|.+|+.+| +.|.+.++|+.+ ++..+++.+.+.+.+
T Consensus 84 ~~rF~~pv~~g~D~~~~~l~~~~~V~~~~~~~~~v~~~~~~~~~~ 128 (142)
T PRK13693 84 NVRFTAVVPVPNDGKGAELVFNGRVKSVDPESKSVTIALTATTGG 128 (142)
T ss_pred EEEecccEECCCCccceEEEEEEEEEEeccCCcEEEEEEEEEECC
Confidence 69999999864 379999999987 444556666665443
No 75
>TIGR01749 fabA beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA. This enzyme, FabA, shows overlapping substrate specificity with FabZ with regard to chain length in fatty acid biosynthesis. It is commonly designated 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) as if it were specific for that chain length, but its specificity is broader; it is active even in the initiation of fatty acid biosynthesis. This enzyme can also isomerize trans-2-decenoyl-ACP to cis-3-decenoyl-ACP to bypass reduction by FabI and instead allow biosynthesis of unsaturated fatty acids. FabA cannot elongate unsaturated fatty acids.
Probab=70.39 E-value=71 Score=27.60 Aligned_cols=95 Identities=9% Similarity=-0.215 Sum_probs=55.2
Q ss_pred eEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEE-E
Q 039457 129 RTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDL-E 207 (260)
Q Consensus 129 ~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL-~ 207 (260)
+......++-|.+.-.-|---...+=|=.++|.|--++++.+...... . ..+.+++++..|.+++.+|+.+ .
T Consensus 51 ~i~a~k~Vs~~e~ff~gHFp~~PvmPG~L~iEamAQ~~~~~~~~~~~~----~---~g~l~gi~~~kfr~~v~Pgd~~~~ 123 (169)
T TIGR01749 51 YVEAELDIRPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFFLGWLGGP----G---RGRALGVGEVKFTGQVLPTAKKVT 123 (169)
T ss_pred EEEEEEEcCCCCcceeCCCCCCCcCchHHHHHHHHHHHHHHHhccccC----C---ceEEeeccEEEEccCEecCCeEEE
Confidence 666666555443221111111122334455677777766655432211 1 2356788899999999999986 8
Q ss_pred EEEEEEEEec---CEEEEEEEEEEec
Q 039457 208 LTGAVTWVGR---SSMEIQLEVTQST 230 (260)
Q Consensus 208 l~G~Vt~tGr---SSmEV~V~V~q~~ 230 (260)
++.+++...+ .-....+++..++
T Consensus 124 l~v~i~~~~~~~~~~~~~~~~i~v~g 149 (169)
T TIGR01749 124 YRIHFKRVINRRLVMGIADGEVLVDG 149 (169)
T ss_pred EEEEEEEEeecCCcEEEEEEEEEECC
Confidence 9999888643 3455666665543
No 76
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=68.04 E-value=54 Score=29.37 Aligned_cols=73 Identities=16% Similarity=0.012 Sum_probs=50.9
Q ss_pred eeHHHHHHHHHHHH-HHHHHHhcCCCCCCCCCceEEEEEEc-cEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEec
Q 039457 153 MRMGKLLEDLDALA-GTISYKHCCNDDGATRPILLVTASVD-RMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQST 230 (260)
Q Consensus 153 LrGGrLLe~LD~lA-g~iA~rh~~~~~~~~~P~~iVTAsVD-~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~ 230 (260)
++-..|+.+.|... ..+...|.... . + ....+++| .|.|+++++.++++.++.+..+.|...-.++.++++.+
T Consensus 183 ~~~~~la~~sD~~~l~~~l~~~~~~~---~-~-~~~~aSldhtv~fh~~~~~~~W~l~~~~s~~~~~Grg~~~~~l~d~~ 257 (271)
T TIGR00189 183 LHQCALAYLSDLTLLPTALNPHNKAG---F-D-GSMAASLDHSIWFHRPFRADDWLLYKCSSPSASGSRGLVEGKIFTRD 257 (271)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcc---c-C-CcEEEeeeeeEEEeCCCCCCeeEEEEEEeccccCCceEEEEEEECCC
Confidence 46678888888843 23333332221 0 1 23456777 77899999999999999999999877777788888765
No 77
>PLN02864 enoyl-CoA hydratase
Probab=65.28 E-value=92 Score=29.37 Aligned_cols=47 Identities=11% Similarity=0.018 Sum_probs=31.7
Q ss_pred cEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEc
Q 039457 193 RMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIG 250 (260)
Q Consensus 193 ~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA 250 (260)
++.|.+|+.+|+.|.++. |..+..+.+.+++.+ + .+.++++..+...
T Consensus 259 ~~rF~~PV~pGdtl~~~~---~~~~~~v~~~~~~~~-~-------g~~vl~G~a~~~~ 305 (310)
T PLN02864 259 SGRFLLHVYPGETLVTEM---WLEGLRVIYQTKVKE-R-------NKAVLSGYVDLRH 305 (310)
T ss_pred EEEEcCCccCCCEEEEEE---EeCCCEEEEEEEEec-C-------CeEEEEEEEEEec
Confidence 689999999999997665 344445555555522 1 3567777777653
No 78
>PRK05174 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; Validated
Probab=56.86 E-value=1.3e+02 Score=26.01 Aligned_cols=101 Identities=9% Similarity=-0.116 Sum_probs=61.0
Q ss_pred CeEEEEEecccccccCcccCCCC-C--ceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCc
Q 039457 128 SRTSILYKFSSDYILKEQYRNPW-N--EMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDI 204 (260)
Q Consensus 128 S~~~~~lp~~sd~~lrp~y~N~~-G--~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~ 204 (260)
++.....-++.|.+. +..|. | .+=|=-++|.|--++++.+....... ..+.+++++..|.+++.+|+
T Consensus 53 g~i~a~k~v~~~e~f---f~gHFp~~PvmPG~L~iEamAQ~~~~~~~~~~~~~-------~g~l~g~~~~kfr~~v~Pgd 122 (172)
T PRK05174 53 GYIVAELDINPDLWF---FGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGPG-------KGRALGVGEVKFTGQVLPTA 122 (172)
T ss_pred eEEEEEEECCCCCcc---ccCCCCCCCcCchHHHHHHHHHHHHHHHhcccccC-------ceEEeeccEEEECccCcCCC
Confidence 356666655444321 22222 1 23344556777777666654332211 12456789999999999999
Q ss_pred E-EEEEEEEEEEec---CEEEEEEEEEEecCCCCCCceEEEEEEEE
Q 039457 205 D-LELTGAVTWVGR---SSMEIQLEVTQSTQGTPYESRVFVFLAFW 246 (260)
Q Consensus 205 d-L~l~G~Vt~tGr---SSmEV~V~V~q~~~~~~tg~~~lv~tA~F 246 (260)
. ++++.++...++ .-....+++..++ +.+.+|..
T Consensus 123 ~~l~l~v~i~~~~~~~~~~~~~~~~i~v~g--------~~va~a~~ 160 (172)
T PRK05174 123 KKVTYEIDIKRVINRKLVMGIADGRVLVDG--------EEIYTAKD 160 (172)
T ss_pred EEEEEEEEEEEEecCCCCEEEEEEEEEECC--------EEEEEEEe
Confidence 8 899999999753 3456666666543 56666643
No 79
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=48.74 E-value=1.7e+02 Score=27.10 Aligned_cols=53 Identities=17% Similarity=0.128 Sum_probs=42.3
Q ss_pred EEEEEEc-cEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEE
Q 039457 186 LVTASVD-RMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAF 245 (260)
Q Consensus 186 iVTAsVD-~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~ 245 (260)
+..+++| .|.|.+|++.++++-.+.+..++|...-.++.+++..+ .++++++.
T Consensus 224 ~~~aSLdhsi~Fh~~~~~d~W~L~~~~s~~a~~gr~~~~g~i~~~~-------G~LvAs~~ 277 (286)
T PRK10526 224 MQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQD-------GVLVASTV 277 (286)
T ss_pred ceEEeeeEeEEEeCCCCCCceEEEEEECCcccCCceEEEEEEECCC-------CCEEEEEE
Confidence 4467888 67899999999999999999999877777788888765 35555543
No 80
>PLN02868 acyl-CoA thioesterase family protein
Probab=47.86 E-value=96 Score=30.02 Aligned_cols=72 Identities=14% Similarity=0.003 Sum_probs=48.2
Q ss_pred eeHHHHHHHHHHHHHHHHHH-hcCCCCCCCCCceEEEEEEc-cEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEec
Q 039457 153 MRMGKLLEDLDALAGTISYK-HCCNDDGATRPILLVTASVD-RMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQST 230 (260)
Q Consensus 153 LrGGrLLe~LD~lAg~iA~r-h~~~~~~~~~P~~iVTAsVD-~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~ 230 (260)
+|-..|....|.+.-..+.. |... +..+.++++| .|.|++|++.++++-.+.+..+.|...-.++.+++..+
T Consensus 327 ~~~a~lay~sD~~~l~~~l~~~~~~------~~~~~~aSLdhsi~Fh~~~~~d~W~l~~~~s~~a~~gr~~~~g~l~~~~ 400 (413)
T PLN02868 327 LHRCVAAYASDLIFLGTSLNPHRTK------GLKFAALSLDHSMWFHRPFRADDWLLFVIVSPAAHNGRGFATGHMFNRK 400 (413)
T ss_pred HHHHHHHHHhhhhhhHhhhccccCC------CCceEEEEcceeEEEecCCCCCceEEEEEECCccCCCcceEEEEEECCC
Confidence 45555666667554433332 2111 1134578888 67899999999999999999999655555677777655
No 81
>PF14765 PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_D 3KG9_A 3KG8_B 3HRR_A 3HRQ_A 3EL6_A 3KG6_B 2VZ8_A 2VZ9_A.
Probab=37.95 E-value=2.9e+02 Score=24.42 Aligned_cols=46 Identities=11% Similarity=0.167 Sum_probs=39.0
Q ss_pred eEEEEEEccEEEec-ccCCCcEEEEEEEEEEEecCEEEEEEEEEEec
Q 039457 185 LLVTASVDRMVVKK-PIRVDIDLELTGAVTWVGRSSMEIQLEVTQST 230 (260)
Q Consensus 185 ~iVTAsVD~I~Fl~-Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~ 230 (260)
.++-.+++++.+.+ +...++.+.+.++....+...+...+.++.++
T Consensus 228 ~~lP~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~v~d~~ 274 (295)
T PF14765_consen 228 VFLPVSIERIRIFRAPPPPGDRLYVYARLVKSDDDTITGDVTVFDED 274 (295)
T ss_dssp EEEEEEEEEEEESSS--SSTSEEEEEEEEESTTTTEEEEEEEEEETT
T ss_pred EEcccEeCEEEEEeccCCCCCEEEEEEEEecccceEEEEEEEEECCC
Confidence 67889999999994 88889999999999887888999999999865
No 82
>PF01336 tRNA_anti-codon: OB-fold nucleic acid binding domain; InterPro: IPR004365 The OB-fold (oligonucleotide/oligosaccharide-binding fold) is found in all three kingdoms and its common architecture presents a binding face that has adapted to bind different ligands. The OB-fold is a five/six-stranded closed beta-barrel formed by 70-80 amino acid residues. The strands are connected by loops of varying length which form the functional appendages of the protein. The majority of OB-fold proteins use the same face for ligand binding or as an active site. Different OB-fold proteins use this 'fold-related binding face' to, variously, bind oligosaccharides, oligonucleotides, proteins, metal ions and catalytic substrates. This entry contains OB-fold domains that bind to nucleic acids []. It includes the anti-codon binding domain of lysyl, aspartyl, and asparaginyl-tRNA synthetases (See IPR004364 from INTERPRO). Aminoacyl-tRNA synthetases catalyse the addition of an amino acid to the appropriate tRNA molecule 6.1.1 from EC. This domain is found in RecG helicase involved in DNA repair. Replication factor A is a heterotrimeric complex, that contains a subunit in this family [, ]. This domain is also found at the C terminus of bacterial DNA polymerase III alpha chain.; GO: 0003676 nucleic acid binding; PDB: 1BBU_A 1KRS_A 1BBW_A 1KRT_A 1EQR_B 1IL2_B 1C0A_A 3KFU_A 1EOV_A 1ASY_A ....
Probab=31.79 E-value=70 Score=22.25 Aligned_cols=30 Identities=10% Similarity=0.212 Sum_probs=21.6
Q ss_pred EecccCCCcEEEEEEEEEEEecCEEEEEEE
Q 039457 196 VKKPIRVDIDLELTGAVTWVGRSSMEIQLE 225 (260)
Q Consensus 196 Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~ 225 (260)
+...+.+|+.+.+.|+|..-....+++.+.
T Consensus 41 ~~~~l~~g~~v~v~G~v~~~~~~~~~l~~~ 70 (75)
T PF01336_consen 41 FREKLKEGDIVRVRGKVKRYNGGELELIVP 70 (75)
T ss_dssp HHHTS-TTSEEEEEEEEEEETTSSEEEEEE
T ss_pred HhhcCCCCeEEEEEEEEEEECCccEEEEEC
Confidence 345899999999999999886554555443
No 83
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=31.48 E-value=3.5e+02 Score=23.57 Aligned_cols=52 Identities=13% Similarity=0.003 Sum_probs=39.3
Q ss_pred EEEEEEccEEEe-cccCCCcEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEE
Q 039457 186 LVTASVDRMVVK-KPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAF 245 (260)
Q Consensus 186 iVTAsVD~I~Fl-~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~ 245 (260)
.+|... .|+|. .|...++++.++.+..+.+.--..++++++.++ .++++++.
T Consensus 198 ~~tld~-ti~f~~~p~~~~~Wl~~~~~~~~~~~Gr~~~~~~l~d~~-------G~lvA~~~ 250 (255)
T PF13622_consen 198 PATLDH-TIHFHRLPFDGDEWLLLEARSPRAGNGRALMEGRLWDED-------GRLVASSR 250 (255)
T ss_dssp EEEEEE-EEEECSHCCTTTS-EEEEEEEEEEETTEEEEEEEEEETT-------S-EEEEEE
T ss_pred ccccee-EEEEEeCCccCCceEEEEEEEeEeCCCEEEEEEEEECCC-------CCEEEEEE
Confidence 345555 68874 677779999999999999999999999999977 35666554
No 84
>PF03622 IBV_3B: IBV 3B protein ; InterPro: IPR005295 These proteins are the product of ORF 3B from Infectious bronchitis virus). Currently, the function of this protein remains unknown [].
Probab=30.31 E-value=16 Score=27.04 Aligned_cols=23 Identities=30% Similarity=0.485 Sum_probs=19.8
Q ss_pred cceeccccCcccccccccCcccc
Q 039457 34 FMFKTKCFDPFLYKFVPTRSFSD 56 (260)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~ 56 (260)
-.++|.+||||-+-+.|.-+|-.
T Consensus 27 svl~t~iFDPFE~cyyrgGsfwE 49 (64)
T PF03622_consen 27 SVLNTEIFDPFEVCYYRGGSFWE 49 (64)
T ss_pred HHHhhhhcCCeeEEEEecCcEEE
Confidence 46899999999999999888865
No 85
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=20.04 E-value=3.7e+02 Score=25.70 Aligned_cols=72 Identities=18% Similarity=0.089 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEc-cEEEecccCCCcEEEEEEEEEEEecCEEEEEEEEEEec
Q 039457 157 KLLEDLDALAGTISYKHCCNDDGATRPILLVTASVD-RMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQST 230 (260)
Q Consensus 157 rLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD-~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~ 230 (260)
.+|..+.+...+....+..+- +-..| .+-.|++| .|-|++|.+.+++|......-.+...---++.+++..+
T Consensus 197 ~lLay~SD~~ll~tal~~Hg~-~~~~~-~~~~aSLDHs~wFhrp~~~ddWlLy~~~sp~A~~~rgl~~G~lf~r~ 269 (289)
T COG1946 197 ALLAYLSDFTLLDTALQPHGL-GFLTP-GIQVASLDHSMWFHRPFRLDDWLLYAQESPSASGGRGLVRGQLFDRD 269 (289)
T ss_pred HHHHHhccchhhhhhhccCCC-ccccC-cceEeeccceEEEeccccCCCEEEEEeeCCcccCCcceeeeEEEcCC
Confidence 455555555544333333221 00112 34567777 67799999999999998888888777778888888765
Done!