Your job contains 1 sequence.
>039459
MGTKRMRANLGNEDLDKLSAPPGFMSLTSFLLKKVENSEESCNSVAFASASAQEPVCANA
PSDMVDAGTLKRSLRNRPWILYEQSDNNQKESNFEQPVEELSSRATLPKGVIRGCPDCSN
CLKVTARWSPEGAKNDVLEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWK
PPCLVKENDIWKSSKFVTQIQQIDGLQNQYFSSKAAKIYDNVNSNSKRRRSLNTGLQNGV
GGNGCTMNLDEARCTEGFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFK
KQGEPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKS
GWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPK
IWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGE
FVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAA
REVVKTQWEISLVKKHTSDNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRM
DKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLFRYEISE
LNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRPNSQAEESKQTEYKPLDSAKFNG
VGSDSFS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039459
(727 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2025635 - symbol:PKDM7D species:3702 "Arabidop... 1861 4.6e-192 1
TAIR|locus:2064910 - symbol:AT2G38950 species:3702 "Arabi... 1082 3.4e-145 3
TAIR|locus:2128659 - symbol:JMJ14 "JUMONJI 14" species:37... 1346 1.7e-137 1
TAIR|locus:2196979 - symbol:JMJ18 "Jumonji domain-contain... 1313 5.4e-134 1
TAIR|locus:2044697 - symbol:MEE27 "maternal effect embryo... 1231 2.6e-125 1
UNIPROTKB|Q5F3R2 - symbol:KDM5B "Lysine-specific demethyl... 505 5.1e-65 3
ZFIN|ZDB-GENE-030131-5379 - symbol:kdm5ba "lysine (K)-spe... 496 3.2e-64 3
ZFIN|ZDB-GENE-030424-1 - symbol:kdm5bb "lysine (K)-specif... 505 6.3e-63 3
UNIPROTKB|F1NRC4 - symbol:KDM5B "Lysine-specific demethyl... 505 9.7e-63 3
UNIPROTKB|F1NUR9 - symbol:KDM5B "Lysine-specific demethyl... 505 1.0e-62 3
WB|WBGene00004319 - symbol:rbr-2 species:6239 "Caenorhabd... 500 6.0e-56 2
UNIPROTKB|Q23541 - symbol:rbr-2 "Lysine-specific demethyl... 500 6.0e-56 2
UNIPROTKB|F1MUR2 - symbol:KDM5B "Uncharacterized protein"... 505 3.0e-55 3
MGI|MGI:1922855 - symbol:Kdm5b "lysine (K)-specific demet... 505 1.2e-54 2
RGD|1565602 - symbol:Kdm5b "lysine (K)-specific demethyla... 505 1.2e-54 2
UNIPROTKB|Q9UGL1 - symbol:KDM5B "Lysine-specific demethyl... 504 1.6e-54 2
UNIPROTKB|F1NN75 - symbol:KDM5A "Uncharacterized protein"... 492 5.6e-54 2
DICTYBASE|DDB_G0268778 - symbol:rbbB "putative Retinoblas... 456 6.3e-54 3
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 506 1.1e-53 2
TAIR|locus:2031290 - symbol:AT1G63490 species:3702 "Arabi... 554 1.1e-53 2
ASPGD|ASPL0000010243 - symbol:AN8211 species:162425 "Emer... 483 3.7e-53 2
ZFIN|ZDB-GENE-060810-94 - symbol:kdm5c "lysine (K)-specif... 479 6.7e-53 2
UNIPROTKB|F5H1F7 - symbol:KDM5A "Lysine-specific demethyl... 485 2.5e-52 2
UNIPROTKB|P29375 - symbol:KDM5A "Lysine-specific demethyl... 485 2.8e-52 2
UNIPROTKB|F1MQ59 - symbol:KDM5A "Uncharacterized protein"... 483 4.0e-52 2
RGD|1305429 - symbol:Kdm5a "lysine (K)-specific demethyla... 480 4.5e-52 2
UNIPROTKB|E9PSW7 - symbol:Jarid1a "Protein Jarid1a" speci... 480 4.5e-52 2
UNIPROTKB|F1Q4J4 - symbol:KDM5A "Uncharacterized protein"... 483 5.0e-52 2
FB|FBgn0031759 - symbol:lid "little imaginal discs" speci... 475 1.4e-51 2
UNIPROTKB|Q30DN6 - symbol:KDM5D "Lysine-specific demethyl... 472 1.9e-51 2
MGI|MGI:2136980 - symbol:Kdm5a "lysine (K)-specific demet... 481 2.3e-51 2
UNIPROTKB|E9PSM3 - symbol:Jarid1a "Protein Jarid1a" speci... 480 2.4e-51 2
UNIPROTKB|E2R0S2 - symbol:KDM5C "Lysine-specific demethyl... 473 2.7e-51 2
UNIPROTKB|Q38JA7 - symbol:KDM5C "Lysine-specific demethyl... 473 3.0e-51 2
UNIPROTKB|B4E1Y0 - symbol:KDM5D "Lysine-specific demethyl... 464 3.6e-51 2
UNIPROTKB|F1MYV2 - symbol:KDM5C "Uncharacterized protein"... 468 1.2e-50 2
UNIPROTKB|B0QZ44 - symbol:KDM5C "Smcy homolog, X-linked (... 468 1.2e-50 2
UNIPROTKB|P41229 - symbol:KDM5C "Lysine-specific demethyl... 468 1.2e-50 2
UNIPROTKB|K7GNM7 - symbol:KDM5C "Lysine-specific demethyl... 468 1.2e-50 2
MGI|MGI:99781 - symbol:Kdm5c "lysine (K)-specific demethy... 468 1.5e-50 2
UNIPROTKB|D4A3B4 - symbol:D4A3B4 "Uncharacterized protein... 470 1.5e-50 2
UNIPROTKB|G4N2P7 - symbol:MGG_04878 "Lid2 complex compone... 462 1.6e-50 2
UNIPROTKB|F1RUI7 - symbol:KDM5C "Lysine-specific demethyl... 468 2.2e-50 2
UNIPROTKB|Q9BY66 - symbol:KDM5D "Lysine-specific demethyl... 464 4.4e-50 2
MGI|MGI:99780 - symbol:Kdm5d "lysine (K)-specific demethy... 464 4.5e-50 2
UNIPROTKB|E9PFH2 - symbol:KDM5D "Lysine-specific demethyl... 464 7.9e-50 2
POMBASE|SPAC1002.05c - symbol:jmj2 "histone demethylase J... 415 1.4e-49 3
UNIPROTKB|A1YVX4 - symbol:KDM5C "Lysine-specific demethyl... 460 2.0e-49 2
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 504 2.2e-45 1
UNIPROTKB|F1PJS3 - symbol:KDM5B "Uncharacterized protein"... 504 2.9e-45 1
UNIPROTKB|I3L8V3 - symbol:KDM5A "Uncharacterized protein"... 458 6.9e-43 1
CGD|CAL0000662 - symbol:orf19.5651 species:5476 "Candida ... 407 1.3e-42 2
UNIPROTKB|E7EV89 - symbol:KDM5A "Lysine-specific demethyl... 400 2.3e-40 2
UNIPROTKB|F1RUJ7 - symbol:JARID2 "Uncharacterized protein... 316 7.0e-40 2
UNIPROTKB|F1P6D5 - symbol:JARID2 "Uncharacterized protein... 322 2.0e-38 2
UNIPROTKB|J9NWC2 - symbol:JARID2 "Uncharacterized protein... 322 2.1e-38 2
MGI|MGI:104813 - symbol:Jarid2 "jumonji, AT rich interact... 321 3.2e-38 2
UNIPROTKB|F1NWZ0 - symbol:JARID2 "Protein Jumonji" specie... 319 8.3e-38 2
UNIPROTKB|Q5F363 - symbol:JARID2 "Protein Jumonji" specie... 319 8.5e-38 2
UNIPROTKB|F1MH56 - symbol:JARID2 "Uncharacterized protein... 315 1.9e-37 2
UNIPROTKB|Q92833 - symbol:JARID2 "Protein Jumonji" specie... 317 2.4e-37 2
ZFIN|ZDB-GENE-060503-246 - symbol:jarid2b "jumonji, AT ri... 333 6.1e-37 2
ZFIN|ZDB-GENE-061218-1 - symbol:jarid2a "jumonji, AT rich... 314 3.6e-34 2
FB|FBgn0036004 - symbol:Jarid2 "Jumonji, AT rich interact... 322 4.5e-33 2
SGD|S000003880 - symbol:JHD2 "JmjC domain family histone ... 320 6.0e-32 2
TAIR|locus:2146653 - symbol:ELF6 "EARLY FLOWERING 6" spec... 276 5.3e-27 2
UNIPROTKB|Q6B0I6 - symbol:KDM4D "Lysine-specific demethyl... 276 7.9e-27 2
UNIPROTKB|E1C6D5 - symbol:KDM4A "Uncharacterized protein"... 292 1.4e-26 2
UNIPROTKB|E1BPL5 - symbol:KDM4A "Uncharacterized protein"... 284 4.5e-26 2
UNIPROTKB|O75164 - symbol:KDM4A "Lysine-specific demethyl... 284 4.9e-26 3
RGD|1591045 - symbol:Kdm4d "lysine (K)-specific demethyla... 274 6.1e-26 2
UNIPROTKB|Q5RD88 - symbol:KDM4A "Lysine-specific demethyl... 284 6.3e-26 3
UNIPROTKB|B2RXH2 - symbol:KDM4E "Lysine-specific demethyl... 266 9.1e-26 2
MGI|MGI:2446210 - symbol:Kdm4a "lysine (K)-specific demet... 281 1.7e-25 3
UNIPROTKB|E2RFE0 - symbol:KDM4A "Uncharacterized protein"... 285 2.0e-25 3
FB|FBgn0053182 - symbol:Kdm4B "Histone demethylase 4B" sp... 270 2.1e-25 2
MGI|MGI:3606484 - symbol:Kdm4d "lysine (K)-specific demet... 269 6.1e-25 2
UNIPROTKB|E1BA41 - symbol:KDM4B "Uncharacterized protein"... 272 1.4e-24 2
ZFIN|ZDB-GENE-030131-6279 - symbol:kdm4ab "lysine (K)-spe... 274 1.4e-24 2
ZFIN|ZDB-GENE-070705-160 - symbol:si:ch211-262l3.1 "si:ch... 274 1.4e-24 2
UNIPROTKB|E1BX38 - symbol:Gga.52669 "Uncharacterized prot... 282 1.9e-24 2
UNIPROTKB|F5GX28 - symbol:KDM4B "Lysine-specific demethyl... 268 3.9e-24 2
UNIPROTKB|E2R243 - symbol:KDM4B "Uncharacterized protein"... 266 6.4e-24 2
UNIPROTKB|O94953 - symbol:KDM4B "Lysine-specific demethyl... 265 7.5e-24 2
ZFIN|ZDB-GENE-060503-664 - symbol:kdm4b "lysine (K)-speci... 264 3.6e-23 2
MGI|MGI:2442355 - symbol:Kdm4b "lysine (K)-specific demet... 266 5.0e-23 2
UNIPROTKB|F1SMN9 - symbol:F1SMN9 "Uncharacterized protein... 263 6.7e-23 3
UNIPROTKB|Q9H3R0 - symbol:KDM4C "Lysine-specific demethyl... 263 7.6e-23 2
UNIPROTKB|F1PHR7 - symbol:KDM4C "Uncharacterized protein"... 263 9.6e-23 2
MGI|MGI:1924054 - symbol:Kdm4c "lysine (K)-specific demet... 263 1.3e-22 3
ZFIN|ZDB-GENE-070209-38 - symbol:zgc:153957 "zgc:153957" ... 270 1.8e-22 2
TAIR|locus:504955644 - symbol:REF6 "relative of early flo... 253 2.2e-22 2
RGD|1307528 - symbol:Kdm4c "lysine (K)-specific demethyla... 263 8.9e-22 3
RGD|1306378 - symbol:Kdm4a "lysine (K)-specific demethyla... 281 1.1e-21 2
ZFIN|ZDB-GENE-120215-3 - symbol:si:ch211-215f22.3 "si:ch2... 249 1.2e-21 2
SGD|S000000971 - symbol:RPH1 "JmjC domain-containing hist... 228 9.6e-21 3
UNIPROTKB|F1N9S1 - symbol:F1N9S1 "Uncharacterized protein... 276 2.7e-20 1
UNIPROTKB|F5H590 - symbol:JARID2 "Protein Jumonji" specie... 173 1.9e-19 2
ASPGD|ASPL0000057825 - symbol:AN1060 species:162425 "Emer... 263 2.3e-19 2
UNIPROTKB|Q9U297 - symbol:jmjd-2 "Lysine-specific demethy... 228 1.5e-17 2
WARNING: Descriptions of 19 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2025635 [details] [associations]
symbol:PKDM7D species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045492
"xylan biosynthetic process" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026 KO:K11446 EMBL:AB493442
IPI:IPI00545403 RefSeq:NP_001184940.1 RefSeq:NP_172338.4
UniGene:At.26858 ProteinModelPortal:C0SUT9 PaxDb:C0SUT9
PRIDE:C0SUT9 EnsemblPlants:AT1G08620.1 EnsemblPlants:AT1G08620.2
GeneID:837384 KEGG:ath:AT1G08620 TAIR:At1g08620 OMA:GMNELET
PhylomeDB:C0SUT9 ProtClustDB:CLSN2722602 Genevestigator:C0SUT9
Uniprot:C0SUT9
Length = 1209
Score = 1861 (660.2 bits), Expect = 4.6e-192, P = 4.6e-192
Identities = 370/703 (52%), Positives = 480/703 (68%)
Query: 1 MGTKRMRANLGNEDLDKL-SAPPGFMSLTSFLLKKV--ENSEESCNSVAFASASAQEPVC 57
MGT+ MR + ED D L S PPGF S +F LK+V + + + A S SA E
Sbjct: 1 MGTELMRICV-KEDSDDLPSVPPGFESYATFTLKRVVPATTSDKAKTPAIESVSATEQAK 59
Query: 58 ANAPSDMVDAGTLKRSLRNRPWILYEQSDN------NQKESNFEQPVEELSSRATLPKGV 111
SD A R+LR RPWI + D+ N + + P + + LPKGV
Sbjct: 60 MEVESDEAKAA---RALRRRPWINHSGCDDDGDCAANNDNAASQNPDQNCDVKPALPKGV 116
Query: 112 IRGCPDCSNCLKVTARWSPEGAKNDVLEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGIC 171
+RGC +C +C KVTARW P+ A+ LE+APVFYP+EEEF DTL YIA +R ++E+YGIC
Sbjct: 117 VRGCEECKDCQKVTARWHPDEARRPDLEDAPVFYPSEEEFEDTLNYIAKIRPEAEKYGIC 176
Query: 172 RIVPPPSWKPPCLVKENDIWKSSKFVTQIQQIDGLQNQYFSSKAAKIYDNVNSNSKRRRS 231
RIVPPPSWKPPC +KE +W+ SKF T++Q++D LQN+ K +K+ + + K+R+
Sbjct: 177 RIVPPPSWKPPCPLKEKQVWEGSKFTTRVQRVDKLQNRSSMKKISKLPNQMRK--KKRKC 234
Query: 232 LNTGLQNGVGGNG--CTMN--LDEARCTEGFESERGPEFTLETFKKYADDFKEQYFCTKN 287
+ G+ + G G C+ + ++E T GFE GP FTL+ F+KYAD+FK QYF K
Sbjct: 235 MKMGMDSVTNGMGDPCSASTGMNELE-TFGFEP--GPGFTLKDFQKYADEFKAQYF--KK 289
Query: 288 IDMTVDENPLVFKKQG--EPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPTV 345
+ + D+ V EP+LE++EGEY RI++ TEEIEVLYG +LETG FGSGFP +
Sbjct: 290 SETSTDDKCKVDNSIDCWEPALEDVEGEYWRIVDKATEEIEVLYGADLETGVFGSGFPKI 349
Query: 346 SNPCEASDHQ-KYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVE 404
S+ AS + KY KSGWNLNN P LPGSLL E +LVP L++GMCF+S W VE
Sbjct: 350 SSSHNASSSEDKYAKSGWNLNNFPRLPGSLLKYEGSDISGVLVPWLYIGMCFSSFCWHVE 409
Query: 405 EHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPL 464
+H L SL YMH GAPK+W+ + + AVK + A +K+LP L +Q ++ V LSPS L
Sbjct: 410 DHHLYSLNYMHWGAPKLWYGVGGKDAVKLEEAMRKHLPDLFEEQPDLLHKLVTQLSPSKL 469
Query: 465 KSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQ 524
K+ GVPV+RC Q GEFVL F +Y++GF+ GFNC+E+VN AP++WLPHGQ AIELY +Q
Sbjct: 470 KTAGVPVHRCVQHAGEFVLTFPRAYHAGFNSGFNCAEAVNVAPVDWLPHGQIAIELYCQQ 529
Query: 525 GRKTSISHDKLLLGAAREVVKTQWEISLVKKHTSDNFMWRHVSGKDGILAKALKSRINSE 584
GRKTSISHDKLLLGAAREVVK WE++L++K+T DN W+ S KDGILAK LK+RI+ E
Sbjct: 530 GRKTSISHDKLLLGAAREVVKADWELNLLRKNTVDNLRWKAFSAKDGILAKTLKARIDME 589
Query: 585 SNRRKYLCSSSQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCS 644
RR++LC+SS + +M NFD T++REC IC +DLHLSAA C CSP+ YSCL HVK+LCS
Sbjct: 590 RTRREFLCNSSLALKMHSNFDATNERECCICFFDLHLSAAGCRCSPEKYSCLTHVKELCS 649
Query: 645 CAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYL 687
C W K FLFRY+I ELNVL+EAVEGKLS+VYRWA+ DL + L
Sbjct: 650 CPWVTKYFLFRYDIDELNVLVEAVEGKLSSVYRWARQDLGLAL 692
>TAIR|locus:2064910 [details] [associations]
symbol:AT2G38950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003700 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 HOGENOM:HOG000241335
KO:K11446 EMBL:AY127026 EMBL:BT001088 IPI:IPI00539605
RefSeq:NP_181429.2 UniGene:At.37227 ProteinModelPortal:Q8L7T6
SMR:Q8L7T6 PRIDE:Q8L7T6 EnsemblPlants:AT2G38950.1 GeneID:818480
KEGG:ath:AT2G38950 TAIR:At2g38950 eggNOG:NOG308887
InParanoid:Q8L7T6 OMA:FDCGFNC PhylomeDB:Q8L7T6
ProtClustDB:CLSN2918209 Genevestigator:Q8L7T6 Uniprot:Q8L7T6
Length = 708
Score = 1082 (385.9 bits), Expect = 3.4e-145, Sum P(3) = 3.4e-145
Identities = 213/425 (50%), Positives = 292/425 (68%)
Query: 261 ERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRRIIEN 320
ERGP +TL++FK +AD +K+ +F K+ ++ EN K E + +IE EYR+I+E+
Sbjct: 201 ERGPGYTLKSFKNFADTYKKSHFGMKD-EVLGSENSSPSLKPNELIVADIEKEYRQIVES 259
Query: 321 PTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESC 380
P EI VLYG +L+T TFGSGFP +S P E+S KY SGWNLN+ LPGSLLS E C
Sbjct: 260 PLIEIGVLYGNDLDTATFGSGFP-LSAPSESS---KY-SSGWNLNSTAKLPGSLLSLEDC 314
Query: 381 KTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKY 440
++ + VPRL VGMC +S +WK E+ L SL Y+H+GAP++W+S+ + KF AA K +
Sbjct: 315 ES--VCVPRLSVGMCLSSQFWKSEKERLYSLCYLHVGAPRVWYSVAGCHRSKFKAAMKSF 372
Query: 441 LPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCS 500
+ +S +Q K + V +SP L EG+PV RC Q PG++V++F GSYYS FDCGFNC
Sbjct: 373 ILEMSGEQPKKSHNPVMMMSPYQLSVEGIPVTRCVQHPGQYVIIFPGSYYSAFDCGFNCL 432
Query: 501 ESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKKHTSDN 560
E NFAP++WLPHG A+++ +E + + IS+DKLL AARE VK E L KK+T+
Sbjct: 433 EKANFAPLDWLPHGDIAVQVNQEMSKTSLISYDKLLFSAAREAVKCLKEYGLSKKNTACY 492
Query: 561 FMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKRECNICLYDLH 620
W G DG+ + +KSRI E NRR++L SS +SQRMDK++D +KREC +CL DL+
Sbjct: 493 TRWNDSCGTDGLFSNIIKSRIKLEKNRREFLISSLESQRMDKSYDAVNKRECCVCLGDLY 552
Query: 621 LSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLFRYEISELNVLLEAVEGK-LSAVYRWA 679
LSA C CS + YSCLNH+++LC+C K FL+RY + ELN+L+EA+EGK LS+++RWA
Sbjct: 553 LSAVNCSCSANRYSCLNHMRKLCACPCDRKSFLYRYTMDELNLLVEALEGKKLSSMFRWA 612
Query: 680 KDDLK 684
D K
Sbjct: 613 GIDQK 617
Score = 262 (97.3 bits), Expect = 3.4e-145, Sum P(3) = 3.4e-145
Identities = 52/93 (55%), Positives = 68/93 (73%)
Query: 133 AKNDVLEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWK 192
++ VLEEAPVF PTEEEF DTL YI+S+R ++E YGIC +VPPPSWKPPCL+KE IW+
Sbjct: 100 SETKVLEEAPVFNPTEEEFRDTLSYISSLRDRAEPYGICCVVPPPSWKPPCLLKEKQIWE 159
Query: 193 SSKFVTQIQQIDGLQNQYFSSKAAKIYDNVNSN 225
+S F Q+Q + G+Q + + K K D +SN
Sbjct: 160 ASTFFPQVQ-LFGIQTE--NRKIKKEVD-ADSN 188
Score = 111 (44.1 bits), Expect = 3.4e-145, Sum P(3) = 3.4e-145
Identities = 30/82 (36%), Positives = 46/82 (56%)
Query: 1 MGTKRMRANLGNEDLDKLSAPPGFMSLTSFLLKKVENSEESCNSVAFASASAQEPVCANA 60
MG + + L + ++D +SAPPGF+S TSF+L+ V +ES SV S QE
Sbjct: 1 MGIEGVSTYLKSGNMDTISAPPGFVSQTSFVLRNVPRDKESPRSV-----SRQEQTTGFG 55
Query: 61 PSDMVDAGTLKRSLRNRPWILY 82
D D+ + L++RPWI++
Sbjct: 56 TDDK-DSCNM--FLKSRPWIVH 74
Score = 45 (20.9 bits), Expect = 2.5e-122, Sum P(3) = 2.5e-122
Identities = 35/147 (23%), Positives = 54/147 (36%)
Query: 80 ILYEQSDNNQKESNFEQPVEELSS---RATLPKGVIRGCPDCSNCLKVTARWSPEGA-KN 135
+L E N E F + +SS RA P G+ C C+ W P K
Sbjct: 104 VLEEAPVFNPTEEEFRDTLSYISSLRDRAE-PYGI------C--CVVPPPSWKPPCLLKE 154
Query: 136 DVLEEAPVFYPTEEEF---SDTLKYIASVRLKSEEYG-----ICRIVPPPSWKPPCLVKE 187
+ EA F+P + F ++ K V S + +CR+ P +
Sbjct: 155 KQIWEASTFFPQVQLFGIQTENRKIKKEVDADSNDAASEGVQLCRVERGPGYTLKSFKNF 214
Query: 188 NDIWKSSKFVTQIQQIDGLQNQYFSSK 214
D +K S F + ++ G +N S K
Sbjct: 215 ADTYKKSHFGMK-DEVLGSENSSPSLK 240
>TAIR|locus:2128659 [details] [associations]
symbol:JMJ14 "JUMONJI 14" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
[GO:0009910 "negative regulation of flower development"
evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005654 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0016702 GO:GO:0009910 GO:GO:0048573
EMBL:AL161553 EMBL:AL080253 GO:GO:0010216 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 EMBL:BT002486 EMBL:BT010548 IPI:IPI00516310
IPI:IPI00656704 PIR:T10582 RefSeq:NP_001031681.1 RefSeq:NP_193773.2
UniGene:At.43482 ProteinModelPortal:Q8GUI6 SMR:Q8GUI6 IntAct:Q8GUI6
PaxDb:Q8GUI6 PRIDE:Q8GUI6 EnsemblPlants:AT4G20400.1 GeneID:827788
KEGG:ath:AT4G20400 TAIR:At4g20400 HOGENOM:HOG000241335
InParanoid:Q8GUI6 KO:K11446 OMA:VQRSGEF PhylomeDB:Q8GUI6
ProtClustDB:CLSN2679960 Genevestigator:Q8GUI6 Uniprot:Q8GUI6
Length = 954
Score = 1346 (478.9 bits), Expect = 1.7e-137, P = 1.7e-137
Identities = 269/585 (45%), Positives = 371/585 (63%)
Query: 98 VEELSSRATLPKGVIRGCPDCS-NCLKVTARWSPEGAKNDVLEEAPVFYPTEEEFSDTLK 156
+EE S + ++ KG PD + + K+TARW+P A ++++AP+FYPT E+F D L
Sbjct: 13 MEEDSEKQSI-KGESSLEPDSTPSSPKITARWNPSEACRPLVDDAPIFYPTNEDFDDPLG 71
Query: 157 YIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQIQQIDGLQNQYFSSKAA 216
YI +R K+E YGICRIVPP +W+PPC +KE IW++SKF T+IQ ID LQN+ K+
Sbjct: 72 YIEKLRSKAESYGICRIVPPVAWRPPCPLKEKKIWENSKFPTRIQFIDLLQNREPIKKST 131
Query: 217 KIYDNVNSNSKRRRSLNTGLQNGVGGNGCTMNLDEARCTEG-FESERGPEFTLETFKKYA 275
K KRRR G +GC + +EG F + GP+FTLE F+KY
Sbjct: 132 K-----TKKRKRRRISKIGYTRRKRDSGCDTASSGSSDSEGKFGFQTGPDFTLEEFQKYD 186
Query: 276 DDFKEQYFCTKNIDMT-VDENPLVFKKQGEPSLENIEGEYRRIIENPTEEIEVLYGENLE 334
+ FKE YF +++ + EN K+ +P ++++EGEY RI+E T+E+EV YG +LE
Sbjct: 187 EYFKECYFQSEDHPGSKASEN-----KKFKPKVKDLEGEYWRIVEQATDEVEVYYGADLE 241
Query: 335 TGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGM 394
T FGSGFP S+ +Y + GWNLNNL LPGS+L+ ESC ++VP L+VGM
Sbjct: 242 TKKFGSGFPKYKPGYPISEADQYSQCGWNLNNLSRLPGSVLAFESCDISGVIVPWLYVGM 301
Query: 395 CFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNR 454
CF++ W VE+H L S+ Y+H G PK+W+ IP +A F+ KK LP L +Q ++
Sbjct: 302 CFSTFCWHVEDHHLYSMNYLHTGDPKVWYGIPGNHAESFENVMKKRLPDLFEEQPDLLHQ 361
Query: 455 WVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHG 514
V LSP LK EGVPVYR Q GEF+L F +Y+SGF+CGFNC+E+VN AP++WL HG
Sbjct: 362 LVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYHSGFNCGFNCAEAVNVAPVDWLVHG 421
Query: 515 QNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKKHTSDNFMWRHVSGKDGILA 574
QNA+E Y +Q RK+S+SHDKLLLGAA E WE+SL KK T W+ V +DG+L
Sbjct: 422 QNAVEGYSKQRRKSSLSHDKLLLGAAMEATYCLWELSLSKKKTPVIARWKRVCSEDGLLT 481
Query: 575 KALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYS 634
KA+K R+ E R +L ++M+ +FD +REC +C YDLH+SA+ C CSP+ ++
Sbjct: 482 KAVKKRVQMEEERLNHLQDGFSLRKMEGDFDNKRERECFLCFYDLHMSASSCKCSPNRFA 541
Query: 635 CLNHVKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWA 679
CL H K LCSC ++ L R+ + EL L+ A+EG L A+ WA
Sbjct: 542 CLIHAKDLCSCESKDRYILIRHTLDELWALVRALEGDLDAIDLWA 586
>TAIR|locus:2196979 [details] [associations]
symbol:JMJ18 "Jumonji domain-containing protein 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 GO:GO:0048573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0032453 KO:K11446
IPI:IPI00545873 RefSeq:NP_001185118.1 RefSeq:NP_174367.6
UniGene:At.27326 UniGene:At.74914 ProteinModelPortal:F4I6G4
SMR:F4I6G4 PRIDE:F4I6G4 EnsemblPlants:AT1G30810.1
EnsemblPlants:AT1G30810.2 GeneID:839963 KEGG:ath:AT1G30810
OMA:NCERECF Uniprot:F4I6G4
Length = 819
Score = 1313 (467.3 bits), Expect = 5.4e-134, P = 5.4e-134
Identities = 269/608 (44%), Positives = 361/608 (59%)
Query: 109 KGVIRGCPDCSNCLKVTARWSPEGAKNDVLEEAPVFYPTEEEFSDTLKYIASVRLKSEEY 168
K I P KV ARW P+ A+ ++ +APVF P+ EEF D L YI +R +E Y
Sbjct: 27 KDTIMEQPSSPRHRKVVARWLPDEAQRPIINDAPVFTPSLEEFVDPLAYIEKIRPLAEPY 86
Query: 169 GICRIVPPPSWKPPCLVKENDIWKSSKFVTQIQQIDGLQNQYFSSKAAKIYDNVNSNSKR 228
GICRI+PP +WKPPC +KE IW+ +KF T+IQ +D LQN+ K K + KR
Sbjct: 87 GICRIIPPSTWKPPCRLKEKSIWEQTKFPTRIQTVDLLQNREPMKKKPK-----SRKRKR 141
Query: 229 RRSLNTGLQNGVGGNGCTMNLDEARCTEGFESERGPEFTLETFKKYADDFKEQYFCTKNI 288
RR+ G G+ + E F G +FTL+ F+KYA FK+ YF K
Sbjct: 142 RRNSRMGSSKRRSGSSPAESTSSPEAEEKFGFNSGSDFTLDEFEKYALHFKDSYFEKK-- 199
Query: 289 DMTVDENPLVFKKQGEPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPTVSNP 348
D + K PS+++IEGEY RI+E PT+E+EV YG +LE G GSGF +
Sbjct: 200 ----DSGGDIVK--WTPSVDDIEGEYWRIVEQPTDEVEVYYGADLENGVLGSGFYKRAEK 253
Query: 349 CEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCL 408
SD ++Y SGWNLNNLP LPGS+LS E C +LVP L+VGMCF+S W VE+H L
Sbjct: 254 FTGSDMEQYTLSGWNLNNLPRLPGSVLSFEDCDISGVLVPWLYVGMCFSSFCWHVEDHHL 313
Query: 409 CSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEG 468
SL Y H G PK+W+ +P A + A +K+LP L +Q + V SPS LK EG
Sbjct: 314 YSLNYHHFGEPKVWYGVPGSNATALEKAMRKHLPDLFEEQPDLLHGLVTQFSPSILKDEG 373
Query: 469 VPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKT 528
V YR Q+ GE+VL F +Y++GF+CGFNC+E+VN AP++WL HGQNA+ELY ++ RKT
Sbjct: 374 VQAYRVVQNSGEYVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLAHGQNAVELYSKETRKT 433
Query: 529 SISHDKLLLGAAREVVKTQWEISLVK-KHTSDNFMWRHVSGKDGILAKALKSRINSESNR 587
S+SHDKLLLGAA E VK WE+S + K + N W+ GK+G L A+++R+ E R
Sbjct: 434 SLSHDKLLLGAAYEAVKALWELSASEGKENTTNLRWKSFCGKNGTLTNAIQARLQMEEGR 493
Query: 588 RKYLCSSSQS-QRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCA 646
L S S ++M+K+FD +REC C YDLHLSA+ C CSP+ Y+CL H LCSC
Sbjct: 494 ITALGRDSSSLKKMEKDFDSNCERECFSCFYDLHLSASGCKCSPEEYACLKHADDLCSCD 553
Query: 647 WTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRPNSQAEESK 706
+ L RY + EL+ L+ A+EG+ + WA L + +S D + +S E K
Sbjct: 554 VKDGFILLRYTMDELSSLVRALEGESDDLKIWASKVLGI---EHSDEDQTKTSSVISEEK 610
Query: 707 QTEYKPLD 714
+ + D
Sbjct: 611 KLKEGSFD 618
>TAIR|locus:2044697 [details] [associations]
symbol:MEE27 "maternal effect embryo arrest 27"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009555
GO:GO:0003700 GO:GO:0009793 EMBL:AC004238 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
HOGENOM:HOG000241335 KO:K11446 IPI:IPI00542103 PIR:T00470
RefSeq:NP_181034.1 UniGene:At.53035 ProteinModelPortal:O64752
SMR:O64752 EnsemblPlants:AT2G34880.1 GeneID:818053
KEGG:ath:AT2G34880 TAIR:At2g34880 InParanoid:O64752 OMA:DICSCEG
PhylomeDB:O64752 ProtClustDB:CLSN2683666 ArrayExpress:O64752
Genevestigator:O64752 Uniprot:O64752
Length = 806
Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
Identities = 253/560 (45%), Positives = 340/560 (60%)
Query: 123 KVTARWSPEGAKNDVLEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPP 182
KV ARW P K + EAPVF+PT EEF DTL YI +R +E +GICRIVPP +W PP
Sbjct: 43 KVLARWDPANEKRPDIGEAPVFHPTSEEFEDTLAYIEKIRPLAESFGICRIVPPSNWSPP 102
Query: 183 CLVKENDIWKSSKFVTQIQQIDGLQNQY-FSSKAAKIYDNVNSNSKRRRSLNTGLQNGVG 241
C +K + IWK+ F T++Q +D LQN+ K K K R++ +NG
Sbjct: 103 CRLKGDSIWKNKNFPTRVQFVDLLQNRGPVKKKTPK--GRKRKRGKYSRTVAPKKRNGSV 160
Query: 242 GNGCTMNLDEARCTEGFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKK 301
+++ +A E F E GPEFTLE F+KYA DFK+ YF K+
Sbjct: 161 SK--SVSTPKATEEENFGFESGPEFTLEKFEKYAQDFKDSYFERKD-------------N 205
Query: 302 QGEPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPT-VSNPCEASDHQKYLKS 360
G+PS+E IEGEY RIIE T E++VLYG +LE GSGF V P +D KY+ S
Sbjct: 206 VGDPSVEEIEGEYWRIIEKETNEVKVLYGTDLENPILGSGFSKGVKIPTRRNDMDKYISS 265
Query: 361 GWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPK 420
GWNLNNL L GSLLS E C+ + VP L+VGMCF++ W VE++ L SL Y H G PK
Sbjct: 266 GWNLNNLARLQGSLLSFEDCEISGVQVPWLYVGMCFSTFCWHVEDNHLYSLNYHHFGEPK 325
Query: 421 IWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGE 480
+W+ +P +A + A +K+LP L +Q + V SP+ LK+EGVPVYR Q+ GE
Sbjct: 326 VWYGVPGSHATGLEKAMRKHLPDLFDEQPDLLHELVTQFSPTILKNEGVPVYRAVQNAGE 385
Query: 481 FVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAA 540
+VL F +Y+SGF+CGFNC+E+VN AP++WL HGQNA+E+Y ++ RKTS+SHDK+LLGAA
Sbjct: 386 YVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQNAVEIYSQETRKTSLSHDKILLGAA 445
Query: 541 REVVKTQWEISLVKKHTSDNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRM 600
E VK+ +S + + F W+ GKDGI+ KA+++R+ E R + L + +M
Sbjct: 446 FEAVKS---LSAHGEDNTKRFSWKRFCGKDGIITKAIEARLRMEEKRIEALGNGFSLVKM 502
Query: 601 DKNFDYTSKRECNICLYDLHLSAAFCP-CSP-DIYSCLNHVKQLCSCAWTEKIFLFRYEI 658
DK+FD +REC C DLHLSA C CS + Y C H +CSC ++ RY I
Sbjct: 503 DKDFDSNCERECISCFSDLHLSATGCKNCSSLEEYGCTKH--DICSCEGKDRFIFLRYTI 560
Query: 659 SELNVLLEAVEGKLSAVYRW 678
EL+ L+ A+EG+ + W
Sbjct: 561 DELSSLVRALEGESDDLKAW 580
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 505 (182.8 bits), Expect = 5.1e-65, Sum P(3) = 5.1e-65
Identities = 118/346 (34%), Positives = 184/346 (53%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + ++TL TF + AD FK YF +M V P E +E E+ R
Sbjct: 344 GFE-QAARDYTLRTFGEMADAFKSDYF-----NMPVHMVPT----------ELVEKEFWR 387
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ E++ V YG ++ + FGSGFP + + ++YL SGWNLNN+P++ S+L
Sbjct: 388 LVSTIEEDVTVEYGADIASKEFGSGFPVRDGKFKVRPEEEEYLDSGWNLNNMPVMEQSVL 447
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + C + +P L+VGMCF+S W +E+H S+ Y+H G PK W+ P A + +
Sbjct: 448 AHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLED 507
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L + GVPVYR Q GEFV+ F +Y+SGF+
Sbjct: 508 VMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQ 567
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREV-VKTQWEISLVK 554
GFN +E+VNF ++WLP G+ IE YR R SHD+++ A + + S V+
Sbjct: 568 GFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADILDVVVASTVQ 627
Query: 555 KHTS----DNFMWRHVSGKDGIL-AKALKSRINSESNRRKYLCSSS 595
K + D M R K G+ ++ + + + R+ Y C ++
Sbjct: 628 KDMAIMIDDEKMLREKVQKLGVTDSERVAFELFPDDERQCYKCKTT 673
Score = 139 (54.0 bits), Expect = 5.1e-65, Sum P(3) = 5.1e-65
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 595 SQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLF 654
+ S+R+ +R+C C +SA +CPC P + CL HV+ LCSC + +
Sbjct: 650 TDSERVAFELFPDDERQCYKCKTTCFMSAVYCPCKPGLLVCLYHVEDLCSCPTYQYKLGY 709
Query: 655 RYEISELNVLLEAVEGKLSAVYRWAKD 681
RY + EL ++ A++ + + WA +
Sbjct: 710 RYTLEELYPMMNALKMRAESYNEWASN 736
Score = 134 (52.2 bits), Expect = 5.1e-65, Sum P(3) = 5.1e-65
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF+D +I +R +E+ GIC++ PPP W+PP D+ K F +
Sbjct: 9 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFAC---DVDKLH-FTPR 64
Query: 200 IQQIDGLQNQ 209
IQ+++ L+ Q
Sbjct: 65 IQRLNELEAQ 74
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 496 (179.7 bits), Expect = 3.2e-64, Sum P(3) = 3.2e-64
Identities = 107/296 (36%), Positives = 161/296 (54%)
Query: 258 FESERGP-EFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
F E+ P ++TL TF AD FK YF +M V P E +E E+ R
Sbjct: 336 FGFEQAPRDYTLRTFGDMADSFKSDYF-----NMPVHMVPT----------ELVEKEFWR 380
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQK-YLKSGWNLNNLPMLPGSLL 375
++ E++ V YG ++ + FGSGFP + + S ++ YL SGWNLNN+P+L S+L
Sbjct: 381 LVSTIEEDVTVEYGADIASKDFGSGFPVKNGTFKVSPEEEGYLTSGWNLNNMPVLEASVL 440
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + C + +P L+VGMCF+S W +E+H S+ Y+H G PK W+ P A + +
Sbjct: 441 THVTADICGMKLPWLYVGMCFSSFCWHIEDHWSYSVNYLHWGEPKTWYGAPGYAAEQLED 500
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
K P L Q ++ V ++P+ L GVP+YR Q GEFV+ F +Y+SGF+
Sbjct: 501 VMKGLAPELFESQPDLLHQLVTIMNPNLLMEHGVPIYRTNQCAGEFVITFPRAYHSGFNQ 560
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEIS 551
GFN +E+VNF +WLP G+ +E YR R SHD++ A + + E++
Sbjct: 561 GFNFAEAVNFCTADWLPLGRQCVEHYRSLYRYCVFSHDEMACNIAAKADSLELELA 616
Score = 148 (57.2 bits), Expect = 3.2e-64, Sum P(3) = 3.2e-64
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 575 KALKSRINSESNRRK--YLCSSSQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDI 632
K + + I E R+ Y SQ++D + +R+C C +LSA CPCSP+
Sbjct: 621 KDMNAMIQEEKILREKAYKLGMWHSQQVDYDILPDEERQCAKCRTTCYLSAITCPCSPEQ 680
Query: 633 YSCLNHVKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWA 679
CL+H + LCSC ++Y ++EL +A+ + + WA
Sbjct: 681 VVCLHHTQDLCSCPARNYTLNYKYTLAELKTFFQALTARAESYDDWA 727
Score = 129 (50.5 bits), Expect = 3.2e-64, Sum P(3) = 3.2e-64
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF+D +I +R +E GIC+I PPP W+PP + + F +
Sbjct: 7 ECPVFEPSWEEFADPFGFINKIRPIAENTGICKIRPPPGWQPPFACDVDRL----HFTPR 62
Query: 200 IQQIDGLQNQ 209
IQ+++ L+ Q
Sbjct: 63 IQRLNELEAQ 72
Score = 38 (18.4 bits), Expect = 1.0e-52, Sum P(3) = 1.0e-52
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 663 VLLEAV---EGKLSAVYRWAKDDLKMYLHSYSS 692
V+LEA+ E +S V W + K +L SS
Sbjct: 1019 VMLEALTRLESLISEVQAWKESAAKTFLLRNSS 1051
>ZFIN|ZDB-GENE-030424-1 [details] [associations]
symbol:kdm5bb "lysine (K)-specific demethylase 5Bb"
species:7955 "Danio rerio" [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030424-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CABZ01042196 EMBL:BX664742
Ensembl:ENSDART00000005583 Bgee:G1K2I1 Uniprot:G1K2I1
Length = 1522
Score = 505 (182.8 bits), Expect = 6.3e-63, Sum P(3) = 6.3e-63
Identities = 105/285 (36%), Positives = 161/285 (56%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE ++TL+ F + AD FK YF +M V P E +E E+ R
Sbjct: 374 GFEQAHR-DYTLKAFGEMADSFKSDYF-----NMPVHMVPT----------ELVEKEFWR 417
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDH-QKYLKSGWNLNNLPMLPGSLL 375
++ E++ V YG ++ + FGSGFP + + H +KYL+ GWNLNN+ M+ S+L
Sbjct: 418 LVGTIQEDVTVEYGADIASKEFGSGFPIKGGRFKIAPHDEKYLQCGWNLNNMAMMTPSVL 477
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + C + +P L+VGMCF+S W +E+H S+ Y+H G PK W+ P A + +A
Sbjct: 478 THVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQLEA 537
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L + GVP+YR Q GEFV+ F SY+SGF+
Sbjct: 538 VMKKLAPELFDSQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRSYHSGFNQ 597
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAA 540
GFN +E+VNF ++W+P G+ ++ YR+ R SHD+++ A
Sbjct: 598 GFNFAEAVNFCTVDWMPLGRQCVDHYRQLHRYCVFSHDEMVCNMA 642
Score = 131 (51.2 bits), Expect = 6.3e-63, Sum P(3) = 6.3e-63
Identities = 30/86 (34%), Positives = 47/86 (54%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF D +I +R +E+ GIC++ PPP W+PP + + F +
Sbjct: 14 ECPVFEPSWEEFKDPFAFINKIRPIAEKTGICKVRPPPDWQPPFACDVDRL----HFTPR 69
Query: 200 IQQIDGLQNQY-----FSSKAAKIYD 220
IQ+++ L+ Q F + AK +D
Sbjct: 70 IQRLNELEAQTRVKLNFLDQIAKFWD 95
Score = 122 (48.0 bits), Expect = 6.3e-63, Sum P(3) = 6.3e-63
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 609 KRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLFRYEISELNVLLEAV 668
+R+C C +LSA CPC P + CL H LCSC + +R+ + +L ++ AV
Sbjct: 694 ERQCVKCRTTCYLSALTCPCRPGVQVCLYHTHDLCSCPISNYTLNYRFTLDDLYPMMNAV 753
Query: 669 EGKLSAVYRWA 679
+ WA
Sbjct: 754 RQRAEYYDDWA 764
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 505 (182.8 bits), Expect = 9.7e-63, Sum P(3) = 9.7e-63
Identities = 118/346 (34%), Positives = 184/346 (53%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + ++TL TF + AD FK YF +M V P E +E E+ R
Sbjct: 332 GFE-QAARDYTLRTFGEMADAFKSDYF-----NMPVHMVPT----------ELVEKEFWR 375
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ E++ V YG ++ + FGSGFP + + ++YL SGWNLNN+P++ S+L
Sbjct: 376 LVSTIEEDVTVEYGADIASKEFGSGFPVRDGKFKVRPEEEEYLDSGWNLNNMPVMEQSVL 435
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + C + +P L+VGMCF+S W +E+H S+ Y+H G PK W+ P A + +
Sbjct: 436 AHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLED 495
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L + GVPVYR Q GEFV+ F +Y+SGF+
Sbjct: 496 VMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQ 555
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREV-VKTQWEISLVK 554
GFN +E+VNF ++WLP G+ IE YR R SHD+++ A + + S V+
Sbjct: 556 GFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADILDVVVASTVQ 615
Query: 555 KHTS----DNFMWRHVSGKDGIL-AKALKSRINSESNRRKYLCSSS 595
K + D M R K G+ ++ + + + R+ Y C ++
Sbjct: 616 KDMAIMIDDEKMLREKVQKLGVTDSERVAFELFPDDERQCYKCKTT 661
Score = 139 (54.0 bits), Expect = 9.7e-63, Sum P(3) = 9.7e-63
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 595 SQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLF 654
+ S+R+ +R+C C +SA +CPC P + CL HV+ LCSC + +
Sbjct: 638 TDSERVAFELFPDDERQCYKCKTTCFMSAVYCPCKPGLLVCLYHVEDLCSCPTYQYKLGY 697
Query: 655 RYEISELNVLLEAVEGKLSAVYRWAKD 681
RY + EL ++ A++ + + WA +
Sbjct: 698 RYTLEELYPMMNALKMRAESYNEWASN 724
Score = 112 (44.5 bits), Expect = 9.7e-63, Sum P(3) = 9.7e-63
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 143 VFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQIQQ 202
VF P+ EEF+D +I +R +E+ GIC++ PPP W+PP D+ K F +IQ+
Sbjct: 1 VFEPSWEEFADPFAFIM-LRPIAEQTGICKVRPPPDWQPPFAC---DVDKLH-FTPRIQR 55
Query: 203 IDGLQNQ 209
++ L+ Q
Sbjct: 56 LNELEAQ 62
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 505 (182.8 bits), Expect = 1.0e-62, Sum P(3) = 1.0e-62
Identities = 118/346 (34%), Positives = 184/346 (53%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + ++TL TF + AD FK YF +M V P E +E E+ R
Sbjct: 343 GFE-QAARDYTLRTFGEMADAFKSDYF-----NMPVHMVPT----------ELVEKEFWR 386
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ E++ V YG ++ + FGSGFP + + ++YL SGWNLNN+P++ S+L
Sbjct: 387 LVSTIEEDVTVEYGADIASKEFGSGFPVRDGKFKVRPEEEEYLDSGWNLNNMPVMEQSVL 446
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + C + +P L+VGMCF+S W +E+H S+ Y+H G PK W+ P A + +
Sbjct: 447 AHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLED 506
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L + GVPVYR Q GEFV+ F +Y+SGF+
Sbjct: 507 VMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQ 566
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREV-VKTQWEISLVK 554
GFN +E+VNF ++WLP G+ IE YR R SHD+++ A + + S V+
Sbjct: 567 GFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADILDVVVASTVQ 626
Query: 555 KHTS----DNFMWRHVSGKDGIL-AKALKSRINSESNRRKYLCSSS 595
K + D M R K G+ ++ + + + R+ Y C ++
Sbjct: 627 KDMAIMIDDEKMLREKVQKLGVTDSERVAFELFPDDERQCYKCKTT 672
Score = 139 (54.0 bits), Expect = 1.0e-62, Sum P(3) = 1.0e-62
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 595 SQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLF 654
+ S+R+ +R+C C +SA +CPC P + CL HV+ LCSC + +
Sbjct: 649 TDSERVAFELFPDDERQCYKCKTTCFMSAVYCPCKPGLLVCLYHVEDLCSCPTYQYKLGY 708
Query: 655 RYEISELNVLLEAVEGKLSAVYRWAKD 681
RY + EL ++ A++ + + WA +
Sbjct: 709 RYTLEELYPMMNALKMRAESYNEWASN 735
Score = 112 (44.5 bits), Expect = 1.0e-62, Sum P(3) = 1.0e-62
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 143 VFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQIQQ 202
VF P+ EEF+D +I +R +E+ GIC++ PPP W+PP D+ K F +IQ+
Sbjct: 12 VFEPSWEEFADPFAFIM-LRPIAEQTGICKVRPPPDWQPPFAC---DVDKLH-FTPRIQR 66
Query: 203 IDGLQNQ 209
++ L+ Q
Sbjct: 67 LNELEAQ 73
>WB|WBGene00004319 [details] [associations]
symbol:rbr-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone
H3-K4 demethylation" evidence=IMP;IDA] [GO:0040028 "regulation of
vulval development" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0008340 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:Z69385 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 HSSP:Q14839
PIR:T27924 RefSeq:NP_502032.2 ProteinModelPortal:Q23541 SMR:Q23541
STRING:Q23541 PaxDb:Q23541 EnsemblMetazoa:ZK593.4 GeneID:177985
KEGG:cel:CELE_ZK593.4 UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4
HOGENOM:HOG000113216 InParanoid:Q23541 OMA:KANQLLF NextBio:899238
Uniprot:Q23541
Length = 1477
Score = 500 (181.1 bits), Expect = 6.0e-56, Sum P(2) = 6.0e-56
Identities = 138/457 (30%), Positives = 221/457 (48%)
Query: 265 EFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEY-RRII--ENP 321
E+ L +F ++A+ +K YF K++ S + +E + + +I ENP
Sbjct: 388 EYNLNSFTEFANKWKCDYFGVKDVSQV--------------SCDAVERSFWKNVISHENP 433
Query: 322 TEEIEVLYGENLETGTFGSGFPTVSNPCEASD---HQKYLKSGWNLNNLPMLPGSLLSSE 378
+ V YG +L T GSGFP + D Q+Y WNLNN+P+L S+LS
Sbjct: 434 ---VSVKYGADLITSRVGSGFPRKEDKHTGPDLKLKQQYASHAWNLNNMPVLRESVLSHF 490
Query: 379 SCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAK 438
+ ++VP ++VGMCF++ W E+H S+ Y H G KIW+ + A KF+ A K
Sbjct: 491 NTGISGMMVPWVYVGMCFSTFCWHTEDHWTYSVNYNHFGERKIWYGVGGEDAEKFEDALK 550
Query: 439 KYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFN 498
K P L+ +Q + + +P L+S GVP++ Q+ GEFV+ F +Y++GF+ G N
Sbjct: 551 KIAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAGFNEGLN 610
Query: 499 CSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKKHTS 558
+E+VNFAPI+WL G+ +E Y R SHD+LL + K +SL T
Sbjct: 611 FAEAVNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSLA---TH 667
Query: 559 DNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKRECNICLYD 618
+ + + K +L + L +R+ SNR+ Q +K D +R C C
Sbjct: 668 EELI--RIYEKQKMLRELL-ARLGV-SNRQM------QQVMFEKIPD--EQRSCRFCKTT 715
Query: 619 LHLSAAFCPCSPDIYSCLNHVKQLC-SCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYR 677
L + A C + +C+ H LC SC + + +R+E+ +LN + + + GK + Y
Sbjct: 716 LFMCALVCNKHKKM-TCVEHHDHLCNSCTTKDYRYQYRFELDQLNNMCDEL-GKRTVNYN 773
Query: 678 WAKDDLKMYLHSYSSRDGLRPNSQAEESKQTEYKPLD 714
K++ L R + +KQ +Y D
Sbjct: 774 GWKEESDEMLEEEGKPKLERIEEFIDSAKQNKYPQTD 810
Score = 152 (58.6 bits), Expect = 6.0e-56, Sum P(2) = 6.0e-56
Identities = 25/48 (52%), Positives = 40/48 (83%)
Query: 141 APVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLV-KE 187
AP++YPTEEEFSD ++Y+A +R ++E++G+ +IVPP ++KPP + KE
Sbjct: 56 APIYYPTEEEFSDPIEYVAKIRHEAEKFGVVKIVPPANFKPPFAIDKE 103
Score = 45 (20.9 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 377 SESCKTCNLLVPRLHVGMCFTSIYW-KVEEHC-LC 409
SES TC + HV C S + K+ E C LC
Sbjct: 1217 SESTLTCIMCDSEFHVRCCEWSPFLEKLPEGCFLC 1251
>UNIPROTKB|Q23541 [details] [associations]
symbol:rbr-2 "Lysine-specific demethylase rbr-2"
species:6239 "Caenorhabditis elegans" [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IDA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0008340
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:Z69385
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0034647
KO:K11446 HSSP:Q14839 PIR:T27924 RefSeq:NP_502032.2
ProteinModelPortal:Q23541 SMR:Q23541 STRING:Q23541 PaxDb:Q23541
EnsemblMetazoa:ZK593.4 GeneID:177985 KEGG:cel:CELE_ZK593.4
UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4 HOGENOM:HOG000113216
InParanoid:Q23541 OMA:KANQLLF NextBio:899238 Uniprot:Q23541
Length = 1477
Score = 500 (181.1 bits), Expect = 6.0e-56, Sum P(2) = 6.0e-56
Identities = 138/457 (30%), Positives = 221/457 (48%)
Query: 265 EFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEY-RRII--ENP 321
E+ L +F ++A+ +K YF K++ S + +E + + +I ENP
Sbjct: 388 EYNLNSFTEFANKWKCDYFGVKDVSQV--------------SCDAVERSFWKNVISHENP 433
Query: 322 TEEIEVLYGENLETGTFGSGFPTVSNPCEASD---HQKYLKSGWNLNNLPMLPGSLLSSE 378
+ V YG +L T GSGFP + D Q+Y WNLNN+P+L S+LS
Sbjct: 434 ---VSVKYGADLITSRVGSGFPRKEDKHTGPDLKLKQQYASHAWNLNNMPVLRESVLSHF 490
Query: 379 SCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAK 438
+ ++VP ++VGMCF++ W E+H S+ Y H G KIW+ + A KF+ A K
Sbjct: 491 NTGISGMMVPWVYVGMCFSTFCWHTEDHWTYSVNYNHFGERKIWYGVGGEDAEKFEDALK 550
Query: 439 KYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFN 498
K P L+ +Q + + +P L+S GVP++ Q+ GEFV+ F +Y++GF+ G N
Sbjct: 551 KIAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAGFNEGLN 610
Query: 499 CSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKKHTS 558
+E+VNFAPI+WL G+ +E Y R SHD+LL + K +SL T
Sbjct: 611 FAEAVNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSLA---TH 667
Query: 559 DNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKRECNICLYD 618
+ + + K +L + L +R+ SNR+ Q +K D +R C C
Sbjct: 668 EELI--RIYEKQKMLRELL-ARLGV-SNRQM------QQVMFEKIPD--EQRSCRFCKTT 715
Query: 619 LHLSAAFCPCSPDIYSCLNHVKQLC-SCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYR 677
L + A C + +C+ H LC SC + + +R+E+ +LN + + + GK + Y
Sbjct: 716 LFMCALVCNKHKKM-TCVEHHDHLCNSCTTKDYRYQYRFELDQLNNMCDEL-GKRTVNYN 773
Query: 678 WAKDDLKMYLHSYSSRDGLRPNSQAEESKQTEYKPLD 714
K++ L R + +KQ +Y D
Sbjct: 774 GWKEESDEMLEEEGKPKLERIEEFIDSAKQNKYPQTD 810
Score = 152 (58.6 bits), Expect = 6.0e-56, Sum P(2) = 6.0e-56
Identities = 25/48 (52%), Positives = 40/48 (83%)
Query: 141 APVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLV-KE 187
AP++YPTEEEFSD ++Y+A +R ++E++G+ +IVPP ++KPP + KE
Sbjct: 56 APIYYPTEEEFSDPIEYVAKIRHEAEKFGVVKIVPPANFKPPFAIDKE 103
Score = 45 (20.9 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 377 SESCKTCNLLVPRLHVGMCFTSIYW-KVEEHC-LC 409
SES TC + HV C S + K+ E C LC
Sbjct: 1217 SESTLTCIMCDSEFHVRCCEWSPFLEKLPEGCFLC 1251
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 505 (182.8 bits), Expect = 3.0e-55, Sum P(3) = 3.0e-55
Identities = 105/281 (37%), Positives = 160/281 (56%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + ++TL TF + AD FK YF +M V P E +E E+ R
Sbjct: 309 GFE-QAARDYTLRTFGEMADAFKSDYF-----NMPVHMVPT----------ELVEKEFWR 352
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ E++ V YG ++ + FGSGFP + S + ++YL SGWNLNN+P++ S+L
Sbjct: 353 LVSTIEEDVTVEYGADIASKEFGSGFPVRDGKVKLSPEEEEYLDSGWNLNNMPVMEQSVL 412
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + C + +P L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 413 AHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLET 472
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L + VPVYR Q GEFV+ F +Y+SGF+
Sbjct: 473 VMKKLAPELFISQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQ 532
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLL 536
GFN +E+VNF ++WLP G+ +E YR R SHD+++
Sbjct: 533 GFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMI 573
Score = 131 (51.2 bits), Expect = 3.0e-55, Sum P(3) = 3.0e-55
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 597 SQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLFRY 656
S+RMD +R+C C +SA C C P + CL+HV++LCSC + +RY
Sbjct: 617 SERMDFELLPDDERQCVKCKTTCFMSALSCCCKPGLLVCLHHVQELCSCPPYKYKLRYRY 676
Query: 657 EISELNVLLEAVEGKLSAVYRWA 679
+ +L ++ A++ + + WA
Sbjct: 677 TLDDLYPMMNALKLRAESYNEWA 699
Score = 48 (22.0 bits), Expect = 3.0e-55, Sum P(3) = 3.0e-55
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 171 CRIVPPPSWKPPCLVKENDIWKSSKFVTQIQQIDGLQNQ 209
C++ P W+PP D+ K F +IQ+++ L+ Q
Sbjct: 2 CKVRDPHDWQPPFAC---DVDKLH-FTPRIQRLNELEAQ 36
Score = 37 (18.1 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 611 ECNICLYDLHLSAAFCPCSPD---IYSCLN 637
+C +C H S P P ++ C N
Sbjct: 1131 QCELCRDAFHTSCVAAPSIPQGPRVWLCPN 1160
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 505 (182.8 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 124/385 (32%), Positives = 197/385 (51%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + ++TL TF + AD FK YF +M V P E +E E+ R
Sbjct: 369 GFE-QAARDYTLRTFGEMADAFKSDYF-----NMPVHMVPT----------ELVEKEFWR 412
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ E++ V YG ++ + FGSGFP + S + ++YL SGWNLNN+P++ S+L
Sbjct: 413 LVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKISPEEEEYLDSGWNLNNMPVMEQSVL 472
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + C + +P L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 473 AHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLEN 532
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L + VPVYR Q GEFV+ F +Y+SGF+
Sbjct: 533 VMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQ 592
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREV-VKTQWEISLVK 554
GFN +E+VNF ++WLP G+ +E YR R SHD+++ A + V S V+
Sbjct: 593 GFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQ 652
Query: 555 KHTS----DNFMWRHVSGKDGIL-AKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSK 609
K + D R K G++ ++ + + + R+ C ++ + K
Sbjct: 653 KDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQ---CIKCKTTCFMSAISCSCK 709
Query: 610 RECNICLYDLHLSAAFCPCSPDIYS 634
+CL+ H+ C C P Y+
Sbjct: 710 PGLLVCLH--HVKE-LCSCPPYKYN 731
Score = 137 (53.3 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 597 SQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLFRY 656
S+RMD +R+C C +SA C C P + CL+HVK+LCSC + +RY
Sbjct: 677 SERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVKELCSCPPYKYNLRYRY 736
Query: 657 EISELNVLLEAVEGKLSAVYRWA 679
+ +L ++ A++ + + WA
Sbjct: 737 TLDDLYPMMNALKLRAESYNEWA 759
Score = 134 (52.2 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF+D +I +R +E+ GIC++ PPP W+PP D+ K F +
Sbjct: 31 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFAC---DVDKLH-FTPR 86
Query: 200 IQQIDGLQNQ 209
IQ+++ L+ Q
Sbjct: 87 IQRLNELEAQ 96
Score = 45 (20.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 666 EAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRPNSQAEESKQTEYKPLD 714
+AV + Y + ++L S R +PN ++ +K EYKP D
Sbjct: 165 KAVGSHIRGHYERILNPYNLFLSGDSLRCLQKPNLTSD-TKDKEYKPHD 212
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 505 (182.8 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 124/385 (32%), Positives = 197/385 (51%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + ++TL TF + AD FK YF +M V P E +E E+ R
Sbjct: 371 GFE-QAARDYTLRTFGEMADAFKSDYF-----NMPVHMVPT----------ELVEKEFWR 414
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ E++ V YG ++ + FGSGFP + S + ++YL SGWNLNN+P++ S+L
Sbjct: 415 LVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKISPEEEEYLDSGWNLNNMPVMEQSVL 474
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + C + +P L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 475 AHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLEN 534
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L + VPVYR Q GEFV+ F +Y+SGF+
Sbjct: 535 VMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQ 594
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREV-VKTQWEISLVK 554
GFN +E+VNF ++WLP G+ +E YR R SHD+++ A + V S V+
Sbjct: 595 GFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQ 654
Query: 555 KHTS----DNFMWRHVSGKDGIL-AKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSK 609
K + D R K G++ ++ + + + R+ C ++ + K
Sbjct: 655 KDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQ---CIKCKTTCFMSAISCSCK 711
Query: 610 RECNICLYDLHLSAAFCPCSPDIYS 634
+CL+ H+ C C P Y+
Sbjct: 712 PGLLVCLH--HVKE-LCSCPPYKYN 733
Score = 137 (53.3 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 597 SQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLFRY 656
S+RMD +R+C C +SA C C P + CL+HVK+LCSC + +RY
Sbjct: 679 SERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVKELCSCPPYKYNLRYRY 738
Query: 657 EISELNVLLEAVEGKLSAVYRWA 679
+ +L ++ A++ + + WA
Sbjct: 739 TLDDLYPMMNALKLRAESYNEWA 761
Score = 134 (52.2 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF+D +I +R +E+ GIC++ PPP W+PP D+ K F +
Sbjct: 31 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFAC---DVDKLH-FTPR 86
Query: 200 IQQIDGLQNQ 209
IQ+++ L+ Q
Sbjct: 87 IQRLNELEAQ 96
Score = 45 (20.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 666 EAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRPNSQAEESKQTEYKPLD 714
+AV + Y + ++L S R +PN ++ +K EYKP D
Sbjct: 165 KAVGSHIRGHYERILNPYNLFLSGDSLRCLQKPNLTSD-TKDKEYKPHD 212
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 504 (182.5 bits), Expect = 1.6e-54, Sum P(2) = 1.6e-54
Identities = 124/384 (32%), Positives = 196/384 (51%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + ++TL TF + AD FK YF +M V P E +E E+ R
Sbjct: 369 GFE-QAARDYTLRTFGEMADAFKSDYF-----NMPVHMVPT----------ELVEKEFWR 412
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ E++ V YG ++ + FGSGFP + S + ++YL SGWNLNN+P++ S+L
Sbjct: 413 LVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVL 472
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + C + +P L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 473 AHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLEN 532
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L + VPVYR Q GEFV+ F +Y+SGF+
Sbjct: 533 VMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQ 592
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREV-VKTQWEISLVK 554
GFN +E+VNF ++WLP G+ +E YR R SHD+++ A + V S V+
Sbjct: 593 GFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQ 652
Query: 555 KHTS----DNFMWRHVSGKDGIL-AKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSK 609
K + D R K G++ ++ + + + R+ C ++ + K
Sbjct: 653 KDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQ---CVKCKTTCFMSAISCSCK 709
Query: 610 RECNICLYDLHLSAAFCPCSPDIY 633
+CL+ H+ C C P Y
Sbjct: 710 PGLLVCLH--HVKE-LCSCPPYKY 730
Score = 137 (53.3 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 597 SQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLFRY 656
S+RMD +R+C C +SA C C P + CL+HVK+LCSC + +RY
Sbjct: 677 SERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCSCPPYKYKLRYRY 736
Query: 657 EISELNVLLEAVEGKLSAVYRWA 679
+ +L ++ A++ + + WA
Sbjct: 737 TLDDLYPMMNALKLRAESYNEWA 759
Score = 134 (52.2 bits), Expect = 1.6e-54, Sum P(2) = 1.6e-54
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF+D +I +R +E+ GIC++ PPP W+PP D+ K F +
Sbjct: 31 ECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFAC---DVDKLH-FTPR 86
Query: 200 IQQIDGLQNQ 209
IQ+++ L+ Q
Sbjct: 87 IQRLNELEAQ 96
Score = 44 (20.5 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 666 EAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRPNSQAEESKQTEYKPLD 714
+AV + Y + ++L S R +PN + +K EYKP D
Sbjct: 165 KAVGSHIRGHYERILNPYNLFLSGDSLRCLQKPNLTTD-TKDKEYKPHD 212
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 492 (178.3 bits), Expect = 5.6e-54, Sum P(2) = 5.6e-54
Identities = 131/426 (30%), Positives = 214/426 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD+FK YF +M V P E +E E+ R
Sbjct: 356 GFE-QAVREYTLQSFGEMADNFKSDYF-----NMPVHMVPT----------ELVEKEFWR 399
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + + Y SGWNLNN+P+L S+L
Sbjct: 400 LVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKLMPEEEDYALSGWNLNNMPILEQSVL 459
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + + VP L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 460 AHINADISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLED 519
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
K+ P L Q ++ V ++P+ L GVPVYR Q GEFV+ F +Y+SGF+
Sbjct: 520 VMKELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQ 579
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLL--LGAAREVVKTQWEISLV 553
G+N +E+VNF +WLP G+ + YR GR SH++L+ + A E + +
Sbjct: 580 GYNFAEAVNFCTADWLPIGRQCVSHYRRLGRHCVFSHEELIFKMAADPECLDVGLAAMVC 639
Query: 554 KKHT---SDNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKR 610
K+ T + R + G+L + + R+ C++ ++ +
Sbjct: 640 KEMTLMIEEETRLRETVVQMGVLMSEEEVFELVPDDERQ--CTACRTTCFLSALTCSCNP 697
Query: 611 ECNICLYDLHLSAAFCPCSPDIYSCLNH---VKQLCSCAWTEKIFLFRYEISELNVLLEA 667
E +CLY H S CPC P CL + ++ L S + K+ Y+ + ++ + EA
Sbjct: 698 ERLVCLY--HPSD-LCPC-PMQNKCLRYRYPLEDLPSLLYGVKVRAQSYD-TWVSRVTEA 752
Query: 668 VEGKLS 673
+ L+
Sbjct: 753 LSANLN 758
Score = 145 (56.1 bits), Expect = 5.6e-54, Sum P(2) = 5.6e-54
Identities = 41/115 (35%), Positives = 61/115 (53%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEFSD L +I +R +E+ GIC+I PP W+PP + +S +F +
Sbjct: 22 ECPVFEPSWEEFSDPLGFIGRIRGLAEKTGICKIRPPKDWQPPFACEV----QSFRFTPR 77
Query: 200 IQQIDGLQNQY-----FSSKAAKIYDNVNSNSK----RRRSLNT-GLQNGVGGNG 244
IQ+++ L+ F + AK ++ SN K R+ L+ GL V G G
Sbjct: 78 IQRLNELEAMTRVKLDFLDQLAKFWELQGSNLKIPVVERKILDLYGLSKIVAGKG 132
Score = 125 (49.1 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 29/113 (25%), Positives = 48/113 (42%)
Query: 568 GKDGILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAF 625
G ++ K + I E+ R+ + ++ F+ +R+C C LSA
Sbjct: 633 GLAAMVCKEMTLMIEEETRLRETVVQMGVLMSEEEVFELVPDDERQCTACRTTCFLSALT 692
Query: 626 CPCSPDIYSCLNHVKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRW 678
C C+P+ CL H LC C K +RY + +L LL V+ + + W
Sbjct: 693 CSCNPERLVCLYHPSDLCPCPMQNKCLRYRYPLEDLPSLLYGVKVRAQSYDTW 745
Score = 52 (23.4 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 525 GRKTSISHDKLLLGAAREVV--KTQ--WEISLVKKHTSDNFMWRHVSGKDGILAKALKSR 580
G K + D +++G EV +TQ W I L H + HV D + K LK R
Sbjct: 1444 GAKAQLE-DLMMVGDLLEVSLDETQHIWRI-LQATHPPSEDRFLHVMEDDSMDEKPLKMR 1501
Query: 581 INSESNRRK 589
S R++
Sbjct: 1502 GRDSSERKR 1510
>DICTYBASE|DDB_G0268778 [details] [associations]
symbol:rbbB "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00558 dictyBase:DDB_G0268778 GO:GO:0005634
GenomeReviews:CM000150_GR GO:GO:0003677 GO:GO:0003700
EMBL:AAFI02000004 GO:GO:0006366 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 RefSeq:XP_646956.1 ProteinModelPortal:Q55ER4
EnsemblProtists:DDB0220639 GeneID:8616646 KEGG:ddi:DDB_G0268778
InParanoid:Q55ER4 OMA:ENEFWRI Uniprot:Q55ER4
Length = 1198
Score = 456 (165.6 bits), Expect = 6.3e-54, Sum P(3) = 6.3e-54
Identities = 109/359 (30%), Positives = 182/359 (50%)
Query: 275 ADDFKEQYFCTKNIDMTVDENPLV---FKKQGEPSLEN----IEGEYRRIIENPTEEIEV 327
+DD K+++ + +++E ++ F K+ P N +E E+ RI+EN E ++V
Sbjct: 637 SDDSKQEFGFYEGNTYSLEEFEILAANFSKKWFPDGNNDPNTVENEFWRIVENGDENVQV 696
Query: 328 LYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTCNLLV 387
YG +L+ T GSGF +N + ++H WNLN +P + SL S + +
Sbjct: 697 HYGSDLDVTTHGSGFSRTTNT-QPNEH-------WNLNQMPKMEESLFSHLTETIAGVTD 748
Query: 388 PRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFK 447
P ++VGM F+S W E++ L S+ Y+H G K W+ +P + +F+ K +P L K
Sbjct: 749 PMMYVGMLFSSFCWHNEDNYLYSINYLHKGTYKTWYGVPGSCSDQFEKVMKNLVPELFEK 808
Query: 448 QSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAP 507
Q + +SP K VP+Y+C Q PGE+V+ F +Y++GF GF +E+VNFAP
Sbjct: 809 QPNLLYLLITMISPDVFKRRHVPIYKCLQGPGEYVITFPQAYHAGFSHGFTIAEAVNFAP 868
Query: 508 IEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKKHTSDNFMWRHVS 567
+W+P G ++IE Y+E R + SHD+LL A + +SD +W
Sbjct: 869 PDWIPFGSSSIERYQETHRSSVFSHDQLLYTIAN------------RSPSSDLSVWL--- 913
Query: 568 GKDGILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKRECNICLYDLHLSAAFC 626
K+ K+ ++ + ++ +R +SQ+ + +C +C YD LS C
Sbjct: 914 SKEFQKIKSKENSLRNQLLKRNPTLIIEKSQKSTQEILNNEPLQCFVCKYDCFLSFIQC 972
Score = 169 (64.5 bits), Expect = 6.3e-54, Sum P(3) = 6.3e-54
Identities = 44/111 (39%), Positives = 62/111 (55%)
Query: 102 SSRATLPKGVIRGCPDCSNCLKVTAR--WSPEGAKNDVLEEAPVFYPTEEEFSDTLKYIA 159
SS++T P P ++ LK T W+ + EAPVFYPT EEF L+YI
Sbjct: 232 SSQSTTPTSSTSTSP--TSKLKQTQYKGWAKNTISEWRIPEAPVFYPTIEEFKSPLRYIE 289
Query: 160 SVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQIQQIDGLQNQY 210
S+R +E+YGIC+IVPP +K + K D K KF T++Q I L+ ++
Sbjct: 290 SIRPIAEKYGICKIVPP--FKSDSITKNIDP-KKFKFKTKVQNIHQLKRRW 337
Score = 54 (24.1 bits), Expect = 6.3e-54, Sum P(3) = 6.3e-54
Identities = 16/85 (18%), Positives = 37/85 (43%)
Query: 635 CLNHVKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRD 694
CL+H + LC C + I +F I +L+ + +V K+ ++ + + +
Sbjct: 1037 CLSHFEDLCDCNKKKLISIF--SIEDLDKTISSVN-KIQHQHQQQQQQQQQQQQQQQQQQ 1093
Query: 695 GLRPNSQAEESKQTEYKPLDSAKFN 719
+ Q ++ +Q +P ++ N
Sbjct: 1094 Q-QQQQQQQQQQQQPIQPTSTSTSN 1117
Score = 43 (20.2 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 202 QIDGL-QNQYFSSKAAKIYDNVNSNSKRRRSLNTGLQNGVGGNGCTMN 248
+ID Q+Q+ + I N N+N+ + N N N N
Sbjct: 978 EIDDFNQHQWLDNSNDSIGSNFNNNNNNNNNNNNNNNNNNNNNNNNNN 1025
Score = 39 (18.8 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 16/73 (21%), Positives = 30/73 (41%)
Query: 253 RCTEGFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKK-QGEPSLENIE 311
R + FES+ +F + T K + D + + I ++ + + + E SL NI+
Sbjct: 421 RYLDDFESDSRKKFMI-THKLTSKDQIDNHLFVNEIIQQYNQYSKFYSEFEKEESLNNIK 479
Query: 312 GEYRRIIENPTEE 324
N +E
Sbjct: 480 NNNNNNNNNSDDE 492
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 506 (183.2 bits), Expect = 1.1e-53, Sum P(2) = 1.1e-53
Identities = 124/384 (32%), Positives = 197/384 (51%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + ++TL TF + AD FK YF +M V P E +E E+ R
Sbjct: 368 GFE-QAARDYTLRTFGEMADAFKSDYF-----NMPVHMVPT----------ELVEKEFWR 411
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ E++ V YG ++ + FGSGFP + S + ++YL SGWNLNN+P++ S+L
Sbjct: 412 LVSTIEEDVTVEYGADIASKEFGSGFPVRDGKVKLSPEEEEYLDSGWNLNNMPVMEQSVL 471
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + C + +P L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +A
Sbjct: 472 AHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGFAAEQLEA 531
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
K+ P L Q ++ V ++P+ L + VPVYR Q GEFV+ F +Y+SGF+
Sbjct: 532 VMKRLAPELFVSQPDLLHQLVTIMNPNTLMTHQVPVYRTNQCAGEFVITFPRAYHSGFNQ 591
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREV-VKTQWEISLVK 554
GFN +E+VNF ++WLP G+ +E YR R SHD+++ A + V S V+
Sbjct: 592 GFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICRMASKADVLDVVVASTVQ 651
Query: 555 KHTS----DNFMWRHVSGKDGIL-AKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSK 609
K + D R K G++ ++ + + + R+ C ++ + K
Sbjct: 652 KDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQ---CVKCKTTCFMSAISCSCK 708
Query: 610 RECNICLYDLHLSAAFCPCSPDIY 633
+CL+ H+ C C P Y
Sbjct: 709 PGLLVCLH--HVKE-LCSCPPYKY 729
Score = 137 (53.3 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 597 SQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLFRY 656
S+RMD +R+C C +SA C C P + CL+HVK+LCSC + +RY
Sbjct: 676 SERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCSCPPYKYKLRYRY 735
Query: 657 EISELNVLLEAVEGKLSAVYRWA 679
+ +L ++ A++ + + WA
Sbjct: 736 TLDDLYPMMNALKLRAESYNEWA 758
Score = 121 (47.7 bits), Expect = 1.1e-53, Sum P(2) = 1.1e-53
Identities = 32/85 (37%), Positives = 48/85 (56%)
Query: 127 RWSPEGAKNDVLE--EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCL 184
RW P G + L E PVF P+ E F+D +I +R +E+ GIC++ PPP W+PP
Sbjct: 18 RW-P-GPLGEFLPPPECPVFEPSWE-FADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFA 74
Query: 185 VKENDIWKSSKFVTQIQQIDGLQNQ 209
D+ K F +IQ+++ L+ Q
Sbjct: 75 C---DVDKLH-FTPRIQRLNELEAQ 95
>TAIR|locus:2031290 [details] [associations]
symbol:AT1G63490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG327026 KO:K11446
EMBL:AY039958 EMBL:BT011572 IPI:IPI00545053 RefSeq:NP_564814.1
UniGene:At.22811 ProteinModelPortal:Q94BQ7 SMR:Q94BQ7 PRIDE:Q94BQ7
EnsemblPlants:AT1G63490.1 GeneID:842655 KEGG:ath:AT1G63490
TAIR:At1g63490 HOGENOM:HOG000084215 InParanoid:Q94BQ7 OMA:WAGSEMD
PhylomeDB:Q94BQ7 ProtClustDB:CLSN2689007 ArrayExpress:Q94BQ7
Genevestigator:Q94BQ7 Uniprot:Q94BQ7
Length = 1116
Score = 554 (200.1 bits), Expect = 1.1e-53, Sum P(2) = 1.1e-53
Identities = 129/350 (36%), Positives = 183/350 (52%)
Query: 328 LYGENLETGTFGSGFPTVSN--P--CEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTC 383
+YG +L+T +GSGFP + + P EA +Y S WNLNN+P L GS+L +
Sbjct: 1 MYGNDLDTSVYGSGFPRIGDQRPESVEADIWDEYCGSPWNLNNMPKLKGSMLQAIRHNIN 60
Query: 384 NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPT 443
+ VP L++GM F+S W E+HC S+ Y+H G K W+ IP A F+ +K LP
Sbjct: 61 GVTVPWLYLGMLFSSFCWHFEDHCFYSVNYLHWGEAKCWYGIPGSAASAFEKVMRKTLPD 120
Query: 444 LSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESV 503
L Q + V LSP+ L+ VPVY Q PG FV+ F S+++GF+ G NC+E+V
Sbjct: 121 LFDAQPDLLFQLVTMLSPTVLQENKVPVYTVLQEPGNFVITFPKSFHAGFNFGLNCAEAV 180
Query: 504 NFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAR-EVVKTQWEISLVKKHT---SD 559
NFA +WLP+G + ELYR + + ISH++LL A+ + I L K+ S
Sbjct: 181 NFATADWLPYGGSGAELYRLYRKPSVISHEELLCVVAKGNCCNNEGSIHLKKELLRIYSK 240
Query: 560 NFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKRECNICLYDL 619
WR K GIL + E C+ S D C IC L
Sbjct: 241 EKTWREQLWKSGILRSS--PMFVPE-------CADSVGIEEDPT--------CIICQQFL 283
Query: 620 HLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLFRYEISELNVLLEAVE 669
HLSA C C P +++CL H K LC C T+ +RY ++EL+++++ VE
Sbjct: 284 HLSAIVCNCRPSVFACLEHWKHLCECEPTKLRLEYRYTLAELDMMVQEVE 333
Score = 38 (18.4 bits), Expect = 1.1e-53, Sum P(2) = 1.1e-53
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 649 EKIFLFRYEISELNVLLEAVEGKLSAV 675
+ +F E+ EL+V L EG L V
Sbjct: 549 DALFKLNSEMLELHVQLPETEGILDLV 575
>ASPGD|ASPL0000010243 [details] [associations]
symbol:AN8211 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IEA] [GO:0034630
"RITS complex localization" evidence=IEA] [GO:0031507
"heterochromatin assembly" evidence=IEA] [GO:0051572 "negative
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:BN001302 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 OrthoDB:EOG44N21B KO:K11446
EMBL:AACD01000143 RefSeq:XP_681480.1 ProteinModelPortal:Q5AU19
EnsemblFungi:CADANIAT00004258 GeneID:2869040 KEGG:ani:AN8211.2
HOGENOM:HOG000160061 OMA:HFGATKT Uniprot:Q5AU19
Length = 1717
Score = 483 (175.1 bits), Expect = 3.7e-53, Sum P(2) = 3.7e-53
Identities = 112/298 (37%), Positives = 167/298 (56%)
Query: 255 TEGFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEY 314
T F E G ++L+ F++ A++FK+ YF +K M D P++ ++ E S +++E E+
Sbjct: 505 TGEFGFEEGGVYSLKQFQEKANNFKKNYFASK---MPFD--PVLNTRRRE-SEDDVEREF 558
Query: 315 RRIIENPTEEIEVLYGENLETGTFGSGFPTVS-NPCEASDHQKYLKSGWNLNNLPMLPGS 373
R++E+ TE +EV YG ++ + T GSGFPTV NP + Y K WNLNNLP S
Sbjct: 559 WRLVESLTETVEVEYGADIHSTTHGSGFPTVERNPLDP-----YSKDPWNLNNLPFHGES 613
Query: 374 LLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKF 433
L + VP ++VGMCF++ W E+H S Y H GA K W+ IP A F
Sbjct: 614 LFRHIKSDISGMTVPWVYVGMCFSTFCWHNEDHYAYSANYQHFGATKTWYGIPGADAEAF 673
Query: 434 DAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGF 493
+ A ++ +P L Q + V + P L+ GV VY Q G+FV+ F +Y++GF
Sbjct: 674 EEAMRQAVPELFEGQPDLLFQLVTLMPPDQLRKAGVNVYALDQRAGQFVITFPQAYHAGF 733
Query: 494 DCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLL-GAAREV-VKT-QW 548
+ GFN +E+VNFAP++W P G +E + R SHD+LL AAR+ + T +W
Sbjct: 734 NHGFNFNEAVNFAPVDWEPFGAAGVERLQAFRRHPCFSHDELLFTAAARDTSISTAKW 791
Score = 148 (57.2 bits), Expect = 3.7e-53, Sum P(2) = 3.7e-53
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 101 LSSRATLPKGVI----RGCPDCSNCLKVTARWSPEGAKNDVLEEAPVFYPTEEEFSDTLK 156
LS+R + P + RG P + T+R P G L+EAP F PTEEEF D
Sbjct: 38 LSTRRSAPLDLSTVERRGQPTAPR--EPTSRVRPHG-----LQEAPTFRPTEEEFRDPEA 90
Query: 157 YIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQIQQIDGLQ 207
YI + + ++YGICRI+PP +W+P + D K F T+ Q+++ ++
Sbjct: 91 YIRKIAPEGKKYGICRIIPPENWQPTFAI---DTEKFH-FKTRRQELNSVE 137
>ZFIN|ZDB-GENE-060810-94 [details] [associations]
symbol:kdm5c "lysine (K)-specific demethylase 5C"
species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-060810-94 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0043524 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 KO:K11446
HOGENOM:HOG000290719 CTD:8242 OMA:ISWQGRA HOVERGEN:HBG068574
EMBL:BX537348 IPI:IPI00611775 RefSeq:NP_001116706.1
UniGene:Dr.75967 SMR:B0S6L0 Ensembl:ENSDART00000098657
Ensembl:ENSDART00000127053 GeneID:553406 KEGG:dre:553406
NextBio:20880164 Uniprot:B0S6L0
Length = 1578
Score = 479 (173.7 bits), Expect = 6.7e-53, Sum P(2) = 6.7e-53
Identities = 125/385 (32%), Positives = 198/385 (51%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD FK YF +M V P E +E E+ R
Sbjct: 418 GFE-QATREYTLQSFGEMADTFKADYF-----NMPVHMVPT----------ELVEKEFWR 461
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQK-YLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + S+ ++ Y +SGWNLN +P+L SLL
Sbjct: 462 LVSSIEEDVTVEYGADIHSKEFGSGFPVNNGKRQLSEEEEEYARSGWNLNVMPVLEQSLL 521
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A K +
Sbjct: 522 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPCSAAEKLEE 581
Query: 436 AAKKYLPTL-SFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFD 494
KK P L F+ H + V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 582 VMKKLTPELFEFQPDLLH-QLVTIMNPNILMSHGVPVVRTNQCAGEFVITFPRAYHSGFN 640
Query: 495 CGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVK 554
G+N +E+VNF +WLP G++ IE YR+ R S ++L A + +++L
Sbjct: 641 QGYNFAEAVNFCTADWLPTGRSCIEHYRQLRRYCVFSQEELTCKMA--ACPEKLDLNLAA 698
Query: 555 KHTSDNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRMDK--NFDYTSKREC 612
+ F+ + ++ L K+L R E+ R + ++ DK + S C
Sbjct: 699 ATHREMFI---IVQEERKLRKSLLERGIKEAEREAFELLPDDERQCDKCKTTCFLSALAC 755
Query: 613 NIC---LYDLHLSAAFCPC-SPDIY 633
+ C L L+ + C C S +Y
Sbjct: 756 SNCPERLVCLYHAQDLCSCPSEKLY 780
Score = 149 (57.5 bits), Expect = 6.7e-53, Sum P(2) = 6.7e-53
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF+D L YIA +R +E+ GIC+I PPP W+PP V+ ++ F +
Sbjct: 13 ECPVFEPSWEEFADPLGYIAKIRPIAEKSGICKIRPPPDWQPPFAVEVDNF----HFTPR 68
Query: 200 IQQIDGLQ 207
IQ+++ L+
Sbjct: 69 IQRLNELE 76
Score = 121 (47.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 30/102 (29%), Positives = 49/102 (48%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L + + F+ +R+C+ C LSA C P+ CL H
Sbjct: 708 VQEERKLRKSLLERGIKEAEREAFELLPDDERQCDKCKTTCFLSALACSNCPERLVCLYH 767
Query: 639 VKQLCSCAWTEKIFL-FRYEISELNVLLEAVEGKLSAVYRWA 679
+ LCSC +EK++L +RY + EL +L ++ + + WA
Sbjct: 768 AQDLCSCP-SEKLYLRYRYTLDELLAMLHRLKVRAESFDSWA 808
>UNIPROTKB|F5H1F7 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A IPI:IPI01018722
ProteinModelPortal:F5H1F7 SMR:F5H1F7 Ensembl:ENST00000382815
ArrayExpress:F5H1F7 Bgee:F5H1F7 Uniprot:F5H1F7
Length = 1636
Score = 485 (175.8 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 136/448 (30%), Positives = 222/448 (49%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD+FK YF +M V P E +E E+ R
Sbjct: 353 GFE-QAVREYTLQSFGEMADNFKSDYF-----NMPVHMVPT----------ELVEKEFWR 396
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEA-SDHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + ++Y SGWNLNN+P+L S+L
Sbjct: 397 LVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQSVL 456
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + + VP L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 457 AHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEE 516
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
++ P L Q ++ V ++P+ L GVPVYR Q GEFV+ F +Y+SGF+
Sbjct: 517 VMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQ 576
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLL--LGAAREVVKTQWEISLV 553
G+N +E+VNF +WLP G+ + YR R SH++L+ + A E + +
Sbjct: 577 GYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVC 636
Query: 554 KK---HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKR 610
K+ T + R + G+L + + R+ CS+ ++ +
Sbjct: 637 KELTLMTEEETRLRESVVQMGVLMSEEEVFELVPDDERQ--CSACRTTCFLSALTCSCNP 694
Query: 611 ECNICLYDLHLSAAFCPCSPDIYSCLNH---VKQLCSCAWTEKIFLFRYEISELNVLLEA 667
E +CLY H CPC P CL + ++ L S + K+ Y+ + ++ + EA
Sbjct: 695 ERLVCLY--H-PTDLCPC-PMQKKCLRYRYPLEDLPSLLYGVKVRAQSYD-TWVSRVTEA 749
Query: 668 VEGKLSAVYRWAKD--DLKMYLHSYSSR 693
LSA + KD +L++ L R
Sbjct: 750 ----LSANFNHKKDLIELRVMLEDAEDR 773
Score = 137 (53.3 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF+D L +I +R +E+ GIC+I PP W+PP + KS +F +
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEV----KSFRFTPR 73
Query: 200 IQQIDGLQ 207
+Q+++ L+
Sbjct: 74 VQRLNELE 81
>UNIPROTKB|P29375 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0016568 GO:GO:0006366
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 eggNOG:NOG327026 KO:K11446 EMBL:S66431 EMBL:AB209999
EMBL:BC048307 EMBL:BC053893 EMBL:BC110916 IPI:IPI00021363
IPI:IPI01014284 PIR:I78879 RefSeq:NP_001036068.1 UniGene:Hs.76272
PDB:2JXJ PDB:2KGG PDB:2KGI PDB:3GL6 PDBsum:2JXJ PDBsum:2KGG
PDBsum:2KGI PDBsum:3GL6 ProteinModelPortal:P29375 SMR:P29375
DIP:DIP-472N IntAct:P29375 STRING:P29375 PhosphoSite:P29375
DMDM:215274124 PaxDb:P29375 PRIDE:P29375 Ensembl:ENST00000399788
GeneID:5927 KEGG:hsa:5927 UCSC:uc001qif.1 CTD:5927
GeneCards:GC12M000389 H-InvDB:HIX0010308 HGNC:HGNC:9886
HPA:HPA006201 MIM:180202 neXtProt:NX_P29375 PharmGKB:PA34250
HOGENOM:HOG000290719 OMA:ECSKPRE OrthoDB:EOG4GB758 ChiTaRS:KDM5A
EvolutionaryTrace:P29375 GenomeRNAi:5927 NextBio:23088
ArrayExpress:P29375 Bgee:P29375 CleanEx:HS_JARID1A CleanEx:HS_RBP2
Genevestigator:P29375 GermOnline:ENSG00000073614 Uniprot:P29375
Length = 1690
Score = 485 (175.8 bits), Expect = 2.8e-52, Sum P(2) = 2.8e-52
Identities = 136/448 (30%), Positives = 222/448 (49%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD+FK YF +M V P E +E E+ R
Sbjct: 353 GFE-QAVREYTLQSFGEMADNFKSDYF-----NMPVHMVPT----------ELVEKEFWR 396
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEA-SDHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + ++Y SGWNLNN+P+L S+L
Sbjct: 397 LVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQSVL 456
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + + VP L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 457 AHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEE 516
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
++ P L Q ++ V ++P+ L GVPVYR Q GEFV+ F +Y+SGF+
Sbjct: 517 VMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQ 576
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLL--LGAAREVVKTQWEISLV 553
G+N +E+VNF +WLP G+ + YR R SH++L+ + A E + +
Sbjct: 577 GYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVC 636
Query: 554 KK---HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKR 610
K+ T + R + G+L + + R+ CS+ ++ +
Sbjct: 637 KELTLMTEEETRLRESVVQMGVLMSEEEVFELVPDDERQ--CSACRTTCFLSALTCSCNP 694
Query: 611 ECNICLYDLHLSAAFCPCSPDIYSCLNH---VKQLCSCAWTEKIFLFRYEISELNVLLEA 667
E +CLY H CPC P CL + ++ L S + K+ Y+ + ++ + EA
Sbjct: 695 ERLVCLY--H-PTDLCPC-PMQKKCLRYRYPLEDLPSLLYGVKVRAQSYD-TWVSRVTEA 749
Query: 668 VEGKLSAVYRWAKD--DLKMYLHSYSSR 693
LSA + KD +L++ L R
Sbjct: 750 ----LSANFNHKKDLIELRVMLEDAEDR 773
Score = 137 (53.3 bits), Expect = 2.8e-52, Sum P(2) = 2.8e-52
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF+D L +I +R +E+ GIC+I PP W+PP + KS +F +
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEV----KSFRFTPR 73
Query: 200 IQQIDGLQ 207
+Q+++ L+
Sbjct: 74 VQRLNELE 81
>UNIPROTKB|F1MQ59 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:DAAA02014587
IPI:IPI00715082 Ensembl:ENSBTAT00000027280 Uniprot:F1MQ59
Length = 1693
Score = 483 (175.1 bits), Expect = 4.0e-52, Sum P(2) = 4.0e-52
Identities = 134/436 (30%), Positives = 217/436 (49%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD+FK YF +M V P E +E E+ R
Sbjct: 353 GFE-QAVREYTLQSFGEMADNFKSDYF-----NMPVHMVPT----------ELVEKEFWR 396
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEA-SDHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + ++Y SGWNLNN+P+L S+L
Sbjct: 397 LVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWNLNNMPVLEQSVL 456
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + + VP L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 457 AHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEE 516
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
++ P L Q ++ V ++P+ L GVPVYR Q GEFV+ F +Y+SGF+
Sbjct: 517 VMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQ 576
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLL--LGAAREVVKTQWEISLV 553
G+N +E+VNF +WLP G+ + YR R SH++L+ + A E + +
Sbjct: 577 GYNFAEAVNFCTADWLPIGRQCVSHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVC 636
Query: 554 KKHT---SDNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKR 610
K+ T + R + G+L + + R+ CS+ ++ +
Sbjct: 637 KELTLLTEEETRLRESVMQMGVLMSEEEVFELVPDDERQ--CSACRTTCFLSALTCSCNP 694
Query: 611 ECNICLYDLHLSAAFCPCSPDIYSCLNH---VKQLCSCAWTEKIFLFRYEISELNVLLEA 667
E +CLY H CPC P CL + ++ L S + K+ Y+ + ++ + EA
Sbjct: 695 ERLVCLY--H-PTDLCPC-PMQKKCLRYRYPLEDLPSLLYGVKVRAQSYD-TWVSRVTEA 749
Query: 668 VEGKLSAVYRWAKDDL 683
LSA + K DL
Sbjct: 750 ----LSANFNHKKGDL 761
Score = 138 (53.6 bits), Expect = 4.0e-52, Sum P(2) = 4.0e-52
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF+D L +I +R +E+ GIC+I PP W+PP + KS +F +
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPMAEKTGICKIRPPKDWQPPFACEV----KSFRFTPR 73
Query: 200 IQQIDGLQ 207
+Q+++ L+
Sbjct: 74 VQRLNELE 81
>RGD|1305429 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISO]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 RGD:1305429 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 HOGENOM:HOG000290719 HOVERGEN:HBG068574
IPI:IPI00781814 EMBL:BC099835 UniGene:Rn.206273 UniGene:Rn.224608
ProteinModelPortal:Q499M6 UCSC:RGD:1305429 InParanoid:Q499M6
Genevestigator:Q499M6 Uniprot:Q499M6
Length = 1099
Score = 480 (174.0 bits), Expect = 4.5e-52, Sum P(2) = 4.5e-52
Identities = 135/449 (30%), Positives = 223/449 (49%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD+FK YF +M V P E +E E+ R
Sbjct: 353 GFE-QAIREYTLQSFGEMADNFKSDYF-----NMPVHMVPT----------ELVEKEFWR 396
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEA-SDHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + ++Y SGWNLNN+P+L S+L
Sbjct: 397 LVSSIEEDVIVEYGADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVL 456
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + + VP L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 457 AHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEE 516
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
++ P L Q ++ V ++P+ L GVPVYR Q GEFV+ F +Y+SGF+
Sbjct: 517 VMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQ 576
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLL--LGAAREVVKTQWEISLV 553
G+N +E+VNF +WLP G+ + YR R SH++L+ + A E + +
Sbjct: 577 GYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVC 636
Query: 554 KK---HTSDNFMWRHVSGKDGI-LAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSK 609
K+ T + R + G+ +++ + + R+ CS+ ++ +
Sbjct: 637 KELTLMTEEETRLRESVVQMGVVMSEEEVFELVPDDERQ---CSACRTTCFLSALTCSCN 693
Query: 610 RECNICLYDLHLSAAFCPCSPDIYSCLNH---VKQLCSCAWTEKIFLFRYEISELNVLLE 666
E +CLY H C C P CL + ++ L S + K+ Y+ + +N + E
Sbjct: 694 PERLVCLY--H-PTDLCSC-PMQNKCLRYRYPLEDLPSLLYGVKVRAQSYD-TWVNRVTE 748
Query: 667 AVEGKLSAVYRWAKD--DLKMYLHSYSSR 693
A LSA + KD +L++ L R
Sbjct: 749 A----LSASFNHKKDLIELRVMLEDAEDR 773
Score = 134 (52.2 bits), Expect = 4.5e-52, Sum P(2) = 4.5e-52
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF+D L +I +R +E+ GIC+I PP W+PP + K+ +F +
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEV----KTFRFTPR 73
Query: 200 IQQIDGLQ 207
+Q+++ L+
Sbjct: 74 VQRLNELE 81
>UNIPROTKB|E9PSW7 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00781814
Ensembl:ENSRNOT00000056198 OMA:IRTRTRN ArrayExpress:E9PSW7
Uniprot:E9PSW7
Length = 1099
Score = 480 (174.0 bits), Expect = 4.5e-52, Sum P(2) = 4.5e-52
Identities = 135/449 (30%), Positives = 223/449 (49%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD+FK YF +M V P E +E E+ R
Sbjct: 353 GFE-QAIREYTLQSFGEMADNFKSDYF-----NMPVHMVPT----------ELVEKEFWR 396
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEA-SDHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + ++Y SGWNLNN+P+L S+L
Sbjct: 397 LVSSIEEDVIVEYGADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVL 456
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + + VP L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 457 AHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEE 516
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
++ P L Q ++ V ++P+ L GVPVYR Q GEFV+ F +Y+SGF+
Sbjct: 517 VMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQ 576
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLL--LGAAREVVKTQWEISLV 553
G+N +E+VNF +WLP G+ + YR R SH++L+ + A E + +
Sbjct: 577 GYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVC 636
Query: 554 KK---HTSDNFMWRHVSGKDGI-LAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSK 609
K+ T + R + G+ +++ + + R+ CS+ ++ +
Sbjct: 637 KELTLMTEEETRLRESVVQMGVVMSEEEVFELVPDDERQ---CSACRTTCFLSALTCSCN 693
Query: 610 RECNICLYDLHLSAAFCPCSPDIYSCLNH---VKQLCSCAWTEKIFLFRYEISELNVLLE 666
E +CLY H C C P CL + ++ L S + K+ Y+ + +N + E
Sbjct: 694 PERLVCLY--H-PTDLCSC-PMQNKCLRYRYPLEDLPSLLYGVKVRAQSYD-TWVNRVTE 748
Query: 667 AVEGKLSAVYRWAKD--DLKMYLHSYSSR 693
A LSA + KD +L++ L R
Sbjct: 749 A----LSASFNHKKDLIELRVMLEDAEDR 773
Score = 134 (52.2 bits), Expect = 4.5e-52, Sum P(2) = 4.5e-52
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF+D L +I +R +E+ GIC+I PP W+PP + K+ +F +
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEV----KTFRFTPR 73
Query: 200 IQQIDGLQ 207
+Q+++ L+
Sbjct: 74 VQRLNELE 81
>UNIPROTKB|F1Q4J4 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927 OMA:ECSKPRE
EMBL:AAEX03015319 EMBL:AAEX03015320 RefSeq:XP_854690.3
Ensembl:ENSCAFT00000025008 GeneID:477727 KEGG:cfa:477727
Uniprot:F1Q4J4
Length = 1688
Score = 483 (175.1 bits), Expect = 5.0e-52, Sum P(2) = 5.0e-52
Identities = 136/448 (30%), Positives = 223/448 (49%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD+FK YF +M V P E +E E+ R
Sbjct: 353 GFE-QAVREYTLQSFGEMADNFKSDYF-----NMPVHMVPT----------ELVEKEFWR 396
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEA-SDHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + ++Y SGWNLNN+P+L S+L
Sbjct: 397 LVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWNLNNMPVLEQSVL 456
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + + VP L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 457 AHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEE 516
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
++ P L Q ++ V ++P+ L GVPVYR Q GEFV+ F +Y+SGF+
Sbjct: 517 VMRELAPELFESQPDLLHQLVTIMNPNILMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQ 576
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLL--LGAAREVVKTQWEISLV 553
G+N +E+VNF +WLP G+ + YR R SH++L+ + A E + +
Sbjct: 577 GYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVC 636
Query: 554 KK---HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKR 610
K+ T + R + G+L + + R+ CS+ ++ +
Sbjct: 637 KELTLMTEEETRLRESVVQMGVLMSEEEVFELVPDDERQ--CSACRTTCFLSALTCSCNP 694
Query: 611 ECNICLYDLHLSAAFCPCSPDIYSCLNH---VKQLCSCAWTEKIFLFRYEISELNVLLEA 667
E +CLY H + CPC P CL + ++ L S + K+ Y+ + ++ + EA
Sbjct: 695 ERLVCLY--HPND-LCPC-PMQKKCLRYRYPLEDLPSLLYGVKVRAQSYD-TWVSRVTEA 749
Query: 668 VEGKLSAVYRWAKD--DLKMYLHSYSSR 693
LSA + KD +L++ L R
Sbjct: 750 ----LSANFNHKKDLIELRVMLEDAEDR 773
Score = 137 (53.3 bits), Expect = 5.0e-52, Sum P(2) = 5.0e-52
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF+D L +I +R +E+ GIC+I PP W+PP + KS +F +
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEV----KSFRFTPR 73
Query: 200 IQQIDGLQ 207
+Q+++ L+
Sbjct: 74 VQRLNELE 81
>FB|FBgn0031759 [details] [associations]
symbol:lid "little imaginal discs" species:7227 "Drosophila
melanogaster" [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IMP] [GO:0043992
"histone acetyltransferase activity (H3-K9 specific)" evidence=IMP]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0043970 "histone H3-K9 acetylation" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0007275 GO:GO:0045893 EMBL:AE014134
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 GO:GO:0045475 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0070822 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 OMA:TEMVERE
EMBL:AY095051 RefSeq:NP_001245908.1 RefSeq:NP_001245909.1
RefSeq:NP_001245910.1 RefSeq:NP_523486.1 RefSeq:NP_723140.1
UniGene:Dm.2779 PDB:2LM1 PDBsum:2LM1 ProteinModelPortal:Q9VMJ7
SMR:Q9VMJ7 DIP:DIP-29330N IntAct:Q9VMJ7 MINT:MINT-1672742
STRING:Q9VMJ7 PaxDb:Q9VMJ7 PRIDE:Q9VMJ7 EnsemblMetazoa:FBtr0079231
EnsemblMetazoa:FBtr0079232 EnsemblMetazoa:FBtr0307069
EnsemblMetazoa:FBtr0307070 EnsemblMetazoa:FBtr0307071 GeneID:33837
KEGG:dme:Dmel_CG9088 CTD:33837 FlyBase:FBgn0031759
InParanoid:Q9VMJ7 OrthoDB:EOG408KPT PhylomeDB:Q9VMJ7
GenomeRNAi:33837 NextBio:785524 Bgee:Q9VMJ7 GO:GO:0043992
Uniprot:Q9VMJ7
Length = 1838
Score = 475 (172.3 bits), Expect = 1.4e-51, Sum P(2) = 1.4e-51
Identities = 124/388 (31%), Positives = 196/388 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE E+TL+ F + AD FK++YF K + + P+ E +E E+ R
Sbjct: 508 GFEQAER-EYTLQQFGQMADQFKQEYF-RKPVHLV-------------PT-EMVEREFWR 551
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLS 376
I+ + E++ V YG +L T GSGFPT S+ Q+Y +S WNLNNLP+L S+L
Sbjct: 552 IVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILG 611
Query: 377 SESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAA 436
+ + P ++VGMCF + W E+H S+ Y+H G PK W+ +P A +F+
Sbjct: 612 HINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEET 671
Query: 437 AKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCG 496
K+ P L Q ++ V ++P+ L + VPV+R Q GEFV+ F +Y++GF+ G
Sbjct: 672 MKQAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQG 731
Query: 497 FNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKKH 556
+N +E+VNFAP +WL G+ + Y R SHD+L+ A E K + I+
Sbjct: 732 YNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIA----- 786
Query: 557 TSDNFMWRHVSGKDGILAKALKSRINSESNRRKY-LCSSSQSQRMDKN---FDYTSKREC 612
T+ + + L K+L + + RR + L + + + N F EC
Sbjct: 787 TACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACEC 846
Query: 613 N----ICLYDLHLSAAFCPCSPDIYSCL 636
N +CL H + C C+P+ ++ +
Sbjct: 847 NDKLIVCLR--HYTV-LCGCAPEKHTLI 871
Score = 143 (55.4 bits), Expect = 1.4e-51, Sum P(2) = 1.4e-51
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 136 DVLEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSK 195
D E PVF PT EEF + L YI+ +R +E+ GI +I+PP +W PP V D+ K +
Sbjct: 156 DTPPECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKILPPATWSPPFAV---DVDKL-R 211
Query: 196 FVTQIQQIDGLQ 207
FV ++Q+++ L+
Sbjct: 212 FVPRVQRLNELE 223
Score = 130 (50.8 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYTS--KRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+++E RK L ++ + F+ + +R C C LSA C C+ + CL H
Sbjct: 797 VDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRH 856
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRW 678
LC CA + ++RY + E+ ++L+ ++ K + RW
Sbjct: 857 YTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERW 896
Score = 43 (20.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 221 NVNSNSKRRRSLNTGLQNGVGG 242
N+NSN+ + TG N GG
Sbjct: 1715 NLNSNTTSGQGAATGGNNATGG 1736
Score = 39 (18.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 223 NSNSKRRRSLNTGLQNGV--GGNGCT 246
NSNS + NT G GGN T
Sbjct: 1709 NSNSSTNLNSNTTSGQGAATGGNNAT 1734
>UNIPROTKB|Q30DN6 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 EMBL:DQ156494 RefSeq:NP_001106929.1 UniGene:Cfa.38975
ProteinModelPortal:Q30DN6 SMR:Q30DN6 GeneID:100134936
KEGG:cfa:100134936 CTD:8284 NextBio:20789320 Uniprot:Q30DN6
Length = 1545
Score = 472 (171.2 bits), Expect = 1.9e-51, Sum P(2) = 1.9e-51
Identities = 126/380 (33%), Positives = 193/380 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD FK YF M V P E +E E+ R
Sbjct: 377 GFE-QATQEYTLQSFGEMADSFKADYF-----SMPVHMVPT----------ELVEKEFWR 420
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP S+ S + ++Y SGWNLN +P+L S+L
Sbjct: 421 LVSSIEEDVTVEYGADIHSKEFGSGFPVSSSQRILSPEEEEYATSGWNLNVMPVLDQSVL 480
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 481 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEQLEE 540
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
K+ P L Q ++ V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 541 VMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 600
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKK 555
G+N +E+VNF +WLP G+ IE YR R SH++L+ A K ++ V
Sbjct: 601 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLA-VAV 659
Query: 556 HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKY-LCSSSQSQRMD-KNFDYTSKRECN 613
H M+ V ++ L KAL + +E+ R + L + Q + K + S C
Sbjct: 660 HKE---MFIMVQ-EERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACY 715
Query: 614 ICLYDL----HLSAAFCPCS 629
C L H++ C CS
Sbjct: 716 DCPDGLVCLSHIND-LCKCS 734
Score = 143 (55.4 bits), Expect = 1.9e-51, Sum P(2) = 1.9e-51
Identities = 32/81 (39%), Positives = 47/81 (58%)
Query: 131 EGAKNDVLE--EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKEN 188
E +D L E PVF PT EF D L YI +R +E+ GIC+I PP W+PP V+ +
Sbjct: 2 ESGSDDFLPPPECPVFEPTWAEFRDPLDYITKIRPIAEKSGICKIRPPADWQPPFAVEVD 61
Query: 189 DIWKSSKFVTQIQQIDGLQNQ 209
+ +F +IQ+++ L+ Q
Sbjct: 62 NF----RFTPRIQRLNELEAQ 78
Score = 119 (46.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L ++ + F+ +R+C C LSA C PD CL+H
Sbjct: 667 VQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 726
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRP 698
+ LC C+ + + +RY + EL +L ++ + + WA + +++ L R
Sbjct: 727 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKIRAESFDTWA-NKVRVALEVEDGRKRSFE 785
Query: 699 NSQAEESKQTE 709
+A ES+ E
Sbjct: 786 ELRALESEARE 796
Score = 49 (22.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 345 VSNPCEASDHQKYLKSGWNLNNLP-MLPGSLLSSESCKT 382
+++ C+ S ++YL+ + L+ LP ML + +ES T
Sbjct: 727 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKIRAESFDT 765
Score = 38 (18.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 510 WLPHGQNAIELYREQGRKTSISHDKLLLGAARE 542
W + A+E+ E GRK S + L ARE
Sbjct: 766 WANKVRVALEV--EDGRKRSFEELRALESEARE 796
>MGI|MGI:2136980 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:2136980 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927
HOGENOM:HOG000290719 OMA:ECSKPRE ChiTaRS:KDM5A EMBL:AC155720
EMBL:AC078896 EMBL:AK135085 EMBL:AK144877 EMBL:AK166055
EMBL:BC080691 IPI:IPI00849089 RefSeq:NP_666109.2 UniGene:Mm.404761
UniGene:Mm.463658 ProteinModelPortal:Q3UXZ9 SMR:Q3UXZ9
IntAct:Q3UXZ9 STRING:Q3UXZ9 PhosphoSite:Q3UXZ9 PaxDb:Q3UXZ9
PRIDE:Q3UXZ9 Ensembl:ENSMUST00000100996 GeneID:214899
KEGG:mmu:214899 UCSC:uc009dne.2 InParanoid:Q3UXZ9 NextBio:374501
Bgee:Q3UXZ9 CleanEx:MM_RBP2 Genevestigator:Q3UXZ9 Uniprot:Q3UXZ9
Length = 1690
Score = 481 (174.4 bits), Expect = 2.3e-51, Sum P(2) = 2.3e-51
Identities = 135/449 (30%), Positives = 223/449 (49%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD+FK YF +M V P E +E E+ R
Sbjct: 353 GFE-QAVREYTLQSFGEMADNFKSDYF-----NMPVHMVPT----------ELVEKEFWR 396
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEA-SDHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + ++Y SGWNLNN+P+L S+L
Sbjct: 397 LVSSIEEDVIVEYGADISSKDFGSGFPKKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVL 456
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + + VP L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 457 AHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEE 516
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
++ P L Q ++ V ++P+ L GVPVYR Q GEFV+ F +Y+SGF+
Sbjct: 517 VMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQ 576
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLL--LGAAREVVKTQWEISLV 553
G+N +E+VNF +WLP G+ + YR R SH++L+ + A E + +
Sbjct: 577 GYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVC 636
Query: 554 KK---HTSDNFMWRHVSGKDGI-LAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSK 609
K+ T + R + G+ +++ + + R+ CS+ ++ +
Sbjct: 637 KELTLMTEEETRLRESVVQMGVVMSEEEVFELVPDDERQ---CSACRTTCFLSALTCSCN 693
Query: 610 RECNICLYDLHLSAAFCPCSPDIYSCLNH---VKQLCSCAWTEKIFLFRYEISELNVLLE 666
E +CLY H C C P CL + ++ L S + K+ Y+ + +N + E
Sbjct: 694 PERLVCLY--H-PTDLCSC-PMQNKCLRYRYPLEDLPSLLYGVKVRAQSYD-TWVNRVTE 748
Query: 667 AVEGKLSAVYRWAKD--DLKMYLHSYSSR 693
A LSA + KD +L++ L R
Sbjct: 749 A----LSASFNHKKDLIELRVMLEDAEDR 773
Score = 133 (51.9 bits), Expect = 2.3e-51, Sum P(2) = 2.3e-51
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF+D L +I +R +E+ GIC+I PP W+PP + K+ +F +
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPFAEKTGICKIRPPKDWQPPFACEV----KTFRFTPR 73
Query: 200 IQQIDGLQ 207
+Q+++ L+
Sbjct: 74 VQRLNELE 81
>UNIPROTKB|E9PSM3 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005737 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 IPI:IPI00365351
Ensembl:ENSRNOT00000034548 NextBio:665124 ArrayExpress:E9PSM3
Uniprot:E9PSM3
Length = 1690
Score = 480 (174.0 bits), Expect = 2.4e-51, Sum P(2) = 2.4e-51
Identities = 135/449 (30%), Positives = 223/449 (49%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD+FK YF +M V P E +E E+ R
Sbjct: 353 GFE-QAIREYTLQSFGEMADNFKSDYF-----NMPVHMVPT----------ELVEKEFWR 396
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEA-SDHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + ++Y SGWNLNN+P+L S+L
Sbjct: 397 LVSSIEEDVIVEYGADISSKDFGSGFPIKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVL 456
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + + VP L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 457 AHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEE 516
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
++ P L Q ++ V ++P+ L GVPVYR Q GEFV+ F +Y+SGF+
Sbjct: 517 VMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQ 576
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLL--LGAAREVVKTQWEISLV 553
G+N +E+VNF +WLP G+ + YR R SH++L+ + A E + +
Sbjct: 577 GYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVC 636
Query: 554 KK---HTSDNFMWRHVSGKDGI-LAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSK 609
K+ T + R + G+ +++ + + R+ CS+ ++ +
Sbjct: 637 KELTLMTEEETRLRESVVQMGVVMSEEEVFELVPDDERQ---CSACRTTCFLSALTCSCN 693
Query: 610 RECNICLYDLHLSAAFCPCSPDIYSCLNH---VKQLCSCAWTEKIFLFRYEISELNVLLE 666
E +CLY H C C P CL + ++ L S + K+ Y+ + +N + E
Sbjct: 694 PERLVCLY--H-PTDLCSC-PMQNKCLRYRYPLEDLPSLLYGVKVRAQSYD-TWVNRVTE 748
Query: 667 AVEGKLSAVYRWAKD--DLKMYLHSYSSR 693
A LSA + KD +L++ L R
Sbjct: 749 A----LSASFNHKKDLIELRVMLEDAEDR 773
Score = 134 (52.2 bits), Expect = 2.4e-51, Sum P(2) = 2.4e-51
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF+D L +I +R +E+ GIC+I PP W+PP + K+ +F +
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEV----KTFRFTPR 73
Query: 200 IQQIDGLQ 207
+Q+++ L+
Sbjct: 74 VQRLNELE 81
>UNIPROTKB|E2R0S2 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ISWQGRA EMBL:AAEX03026384
Ensembl:ENSCAFT00000025665 Uniprot:E2R0S2
Length = 1520
Score = 473 (171.6 bits), Expect = 2.7e-51, Sum P(2) = 2.7e-51
Identities = 123/380 (32%), Positives = 193/380 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD FK YF +M V P E +E E+ R
Sbjct: 384 GFE-QATREYTLQSFGEMADSFKADYF-----NMPVHMVPT----------ELVEKEFWR 427
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP N + + ++Y SGWNLN +P+L S+L
Sbjct: 428 LVNSIEEDVTVEYGADIHSKEFGSGFPVSDNKRHLTPEEEEYATSGWNLNVMPVLEQSVL 487
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A +
Sbjct: 488 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE 547
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 548 VMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 607
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKK 555
G+N +E+VNF +WLP G+ IE YR R SH++L+ A + +++L
Sbjct: 608 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNLAAA 665
Query: 556 HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKY-LCSSSQSQRMD-KNFDYTSKRECN 613
+ F+ + ++ L KAL + +E+ R + L + Q + K + S C
Sbjct: 666 VHKEMFI---MVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACY 722
Query: 614 ICLYDL----HLSAAFCPCS 629
C L H++ C CS
Sbjct: 723 DCPDGLVCLSHIND-LCKCS 741
Score = 140 (54.3 bits), Expect = 2.7e-51, Sum P(2) = 2.7e-51
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 131 EGAKNDVLE--EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKEN 188
E +D L E PVF P+ EF D L YIA +R +E+ GIC+I PP W+PP V+ +
Sbjct: 2 EPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVD 61
Query: 189 DIWKSSKFVTQIQQIDGLQNQ 209
+ +F +IQ+++ L+ Q
Sbjct: 62 NF----RFTPRIQRLNELEAQ 78
Score = 121 (47.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L ++ + F+ +R+C C LSA C PD CL+H
Sbjct: 674 VQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 733
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRP 698
+ LC C+ + + +RY + EL +L ++ + + WA + +++ L R
Sbjct: 734 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA-NKVRVALEVEDGRKRSLE 792
Query: 699 NSQAEESKQTE 709
+A ES+ E
Sbjct: 793 ELRALESEARE 803
Score = 48 (22.0 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 345 VSNPCEASDHQKYLKSGWNLNNLP-MLPGSLLSSESCKT 382
+++ C+ S ++YL+ + L+ LP ML + +ES T
Sbjct: 734 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDT 772
Score = 40 (19.1 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 510 WLPHGQNAIELYREQGRKTSISHDKLLLGAARE 542
W + A+E+ E GRK S+ + L ARE
Sbjct: 773 WANKVRVALEV--EDGRKRSLEELRALESEARE 803
>UNIPROTKB|Q38JA7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 KO:K11446 EMBL:DQ223016 RefSeq:NP_001041497.1
UniGene:Cfa.46487 ProteinModelPortal:Q38JA7 SMR:Q38JA7 PRIDE:Q38JA7
GeneID:491894 KEGG:cfa:491894 CTD:8242 InParanoid:Q38JA7
OrthoDB:EOG4894KP NextBio:20864597 Uniprot:Q38JA7
Length = 1556
Score = 473 (171.6 bits), Expect = 3.0e-51, Sum P(2) = 3.0e-51
Identities = 123/380 (32%), Positives = 193/380 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD FK YF +M V P E +E E+ R
Sbjct: 384 GFE-QATREYTLQSFGEMADSFKADYF-----NMPVHMVPT----------ELVEKEFWR 427
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP N + + ++Y SGWNLN +P+L S+L
Sbjct: 428 LVNSIEEDVTVEYGADIHSKEFGSGFPVSDNKRHLTPEEEEYATSGWNLNVMPVLEQSVL 487
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A +
Sbjct: 488 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE 547
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 548 VMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 607
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKK 555
G+N +E+VNF +WLP G+ IE YR R SH++L+ A + +++L
Sbjct: 608 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNLAAA 665
Query: 556 HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKY-LCSSSQSQRMD-KNFDYTSKRECN 613
+ F+ + ++ L KAL + +E+ R + L + Q + K + S C
Sbjct: 666 VHKEMFI---MVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACY 722
Query: 614 ICLYDL----HLSAAFCPCS 629
C L H++ C CS
Sbjct: 723 DCPDGLVCLSHIND-LCKCS 741
Score = 140 (54.3 bits), Expect = 3.0e-51, Sum P(2) = 3.0e-51
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 131 EGAKNDVLE--EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKEN 188
E +D L E PVF P+ EF D L YIA +R +E+ GIC+I PP W+PP V+ +
Sbjct: 2 EPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVD 61
Query: 189 DIWKSSKFVTQIQQIDGLQNQ 209
+ +F +IQ+++ L+ Q
Sbjct: 62 NF----RFTPRIQRLNELEAQ 78
Score = 121 (47.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L ++ + F+ +R+C C LSA C PD CL+H
Sbjct: 674 VQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 733
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRP 698
+ LC C+ + + +RY + EL +L ++ + + WA + +++ L R
Sbjct: 734 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA-NKVRVALEVEDGRKRSLE 792
Query: 699 NSQAEESKQTE 709
+A ES+ E
Sbjct: 793 ELRALESEARE 803
Score = 51 (23.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 23/84 (27%), Positives = 35/84 (41%)
Query: 304 EPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSG----FPTVSNPCEASDHQKYLK 359
+P+ E +E +R+ + E E E LE T G G PT +P ++Q L+
Sbjct: 1468 DPAREELEP--KRVRSSGPEAEEAQEEEELEEETGGEGPPQTLPTTGSP-STQENQNGLE 1524
Query: 360 SGWNLNNLPMLPGSLLSSESCKTC 383
+ P P S LS + C
Sbjct: 1525 PALATSG-PSAPFSTLSPQLHVPC 1547
Score = 48 (22.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 345 VSNPCEASDHQKYLKSGWNLNNLP-MLPGSLLSSESCKT 382
+++ C+ S ++YL+ + L+ LP ML + +ES T
Sbjct: 734 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDT 772
Score = 40 (19.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 510 WLPHGQNAIELYREQGRKTSISHDKLLLGAARE 542
W + A+E+ E GRK S+ + L ARE
Sbjct: 773 WANKVRVALEV--EDGRKRSLEELRALESEARE 803
>UNIPROTKB|B4E1Y0 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 UniGene:Hs.80358 HGNC:HGNC:11115 ChiTaRS:KDM5D
HOVERGEN:HBG068574 EMBL:AK304027 IPI:IPI01013623 SMR:B4E1Y0
STRING:B4E1Y0 Ensembl:ENST00000535647 UCSC:uc004fuh.2
Uniprot:B4E1Y0
Length = 888
Score = 464 (168.4 bits), Expect = 3.6e-51, Sum P(2) = 3.6e-51
Identities = 124/382 (32%), Positives = 194/382 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E++L++F + AD FK YF +M V P E +E E+ R
Sbjct: 374 GFE-QATQEYSLQSFGEMADSFKSDYF-----NMPVHMVPT----------ELVEKEFWR 417
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQK-YLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP ++ S +K Y SGWNLN +P+L S+L
Sbjct: 418 LVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMPVLDQSVL 477
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A +
Sbjct: 478 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE 537
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
K P L Q ++ V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 538 VMKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 597
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLL--LGAAREVVKTQWEISLV 553
G+N +E+VNF +WLP G+ IE YR R SH++L+ + A E + +++
Sbjct: 598 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVH 657
Query: 554 KKHTSDNFMWRHVSGKDGILAKALKSRINSESNRRKY-LCSSSQSQRMD-KNFDYTSKRE 611
K+ M+ V ++ L KAL + +E+ R + L + Q + K + S
Sbjct: 658 KE------MFIMVQ-EERRLRKALLEKGVTEAEREAFELLPDDERQCIKCKTTCFLSALA 710
Query: 612 CNICLYDL----HLSAAFCPCS 629
C C L H++ C CS
Sbjct: 711 CYDCPDGLVCLSHIND-LCKCS 731
Score = 139 (54.0 bits), Expect = 3.6e-51, Sum P(2) = 3.6e-51
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EF D L YIA +R +E+ GIC+I PP W+PP V+ ++ +F +
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNF----RFTPR 68
Query: 200 IQQIDGLQNQ 209
+Q+++ L+ Q
Sbjct: 69 VQRLNELEAQ 78
Score = 120 (47.3 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L ++ + F+ +R+C C LSA C PD CL+H
Sbjct: 664 VQEERRLRKALLEKGVTEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 723
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRP 698
+ LC C+ + + +RY + EL +L ++ + + WA + +++ L R
Sbjct: 724 INDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWA-NKVRVALEVEDGRKRSFE 782
Query: 699 NSQAEESKQTE 709
+A ES+ E
Sbjct: 783 ELRALESEARE 793
Score = 49 (22.3 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 345 VSNPCEASDHQKYLKSGWNLNNLP-MLPGSLLSSESCKT 382
+++ C+ S ++YL+ + L+ LP ML + +ES T
Sbjct: 724 INDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDT 762
Score = 38 (18.4 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 510 WLPHGQNAIELYREQGRKTSISHDKLLLGAARE 542
W + A+E+ E GRK S + L ARE
Sbjct: 763 WANKVRVALEV--EDGRKRSFEELRALESEARE 793
>UNIPROTKB|F1MYV2 [details] [associations]
symbol:KDM5C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 KO:K11446 CTD:8242
OMA:ISWQGRA EMBL:DAAA02073278 IPI:IPI00703369 RefSeq:NP_776610.2
UniGene:Bt.8145 PRIDE:F1MYV2 Ensembl:ENSBTAT00000019893
GeneID:281490 KEGG:bta:281490 NextBio:20805465 ArrayExpress:F1MYV2
Uniprot:F1MYV2
Length = 1555
Score = 468 (169.8 bits), Expect = 1.2e-50, Sum P(2) = 1.2e-50
Identities = 122/380 (32%), Positives = 193/380 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD FK YF +M V P E +E E+ R
Sbjct: 384 GFE-QATREYTLQSFGEMADSFKADYF-----NMPVHMVPT----------ELVEKEFWR 427
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + + ++Y SGWNLN +P+L S+L
Sbjct: 428 LVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVL 487
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A +
Sbjct: 488 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE 547
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 548 VMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 607
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKK 555
G+N +E+VNF +WLP G+ IE YR R SH++L+ A + +++L
Sbjct: 608 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNLAAA 665
Query: 556 HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKY-LCSSSQSQRMD-KNFDYTSKRECN 613
+ F+ + ++ L KAL + +E+ R + L + Q + K + S C
Sbjct: 666 VHKEMFI---MVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACY 722
Query: 614 ICLYDL----HLSAAFCPCS 629
C L H++ C CS
Sbjct: 723 DCPDGLVCLSHIND-LCKCS 741
Score = 140 (54.3 bits), Expect = 1.2e-50, Sum P(2) = 1.2e-50
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 131 EGAKNDVLE--EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKEN 188
E +D L E PVF P+ EF D L YIA +R +E+ GIC+I PP W+PP V+ +
Sbjct: 2 EPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVD 61
Query: 189 DIWKSSKFVTQIQQIDGLQNQ 209
+ +F +IQ+++ L+ Q
Sbjct: 62 NF----RFTPRIQRLNELEAQ 78
Score = 121 (47.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L ++ + F+ +R+C C LSA C PD CL+H
Sbjct: 674 VQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 733
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRP 698
+ LC C+ + + +RY + EL +L ++ + + WA + +++ L R
Sbjct: 734 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA-NKVRVALEVEDGRKRSLE 792
Query: 699 NSQAEESKQTE 709
+A ES+ E
Sbjct: 793 ELRALESEARE 803
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 28/89 (31%), Positives = 37/89 (41%)
Query: 304 EPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWN 363
+P+ E +E +R+ + E E E LE T G G P P +D ++G
Sbjct: 1468 DPAREELEP--KRVRSSGPEAEEAQEEEELEEETGGEGPPP---PLPTTDSPSTQENGLE 1522
Query: 364 LNNLPMLPGSLLSSESCKTCNLLVPRLHV 392
P L S SS T L PRLHV
Sbjct: 1523 ----PALGASSGSSGPFPT---LTPRLHV 1544
Score = 48 (22.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 345 VSNPCEASDHQKYLKSGWNLNNLP-MLPGSLLSSESCKT 382
+++ C+ S ++YL+ + L+ LP ML + +ES T
Sbjct: 734 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDT 772
Score = 40 (19.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 510 WLPHGQNAIELYREQGRKTSISHDKLLLGAARE 542
W + A+E+ E GRK S+ + L ARE
Sbjct: 773 WANKVRVALEV--EDGRKRSLEELRALESEARE 803
>UNIPROTKB|B0QZ44 [details] [associations]
symbol:KDM5C "Smcy homolog, X-linked (Mouse), isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:CH471154 EMBL:AL139396 HOGENOM:HOG000290719
UniGene:Hs.631768 HGNC:HGNC:11114 ChiTaRS:KDM5C IPI:IPI00879547
SMR:B0QZ44 Ensembl:ENST00000404049 UCSC:uc004dsa.3
HOVERGEN:HBG068574 Uniprot:B0QZ44
Length = 1559
Score = 468 (169.8 bits), Expect = 1.2e-50, Sum P(2) = 1.2e-50
Identities = 122/380 (32%), Positives = 193/380 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD FK YF +M V P E +E E+ R
Sbjct: 383 GFE-QATREYTLQSFGEMADSFKADYF-----NMPVHMVPT----------ELVEKEFWR 426
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + + ++Y SGWNLN +P+L S+L
Sbjct: 427 LVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVL 486
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A +
Sbjct: 487 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE 546
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 547 VMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 606
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKK 555
G+N +E+VNF +WLP G+ IE YR R SH++L+ A + +++L
Sbjct: 607 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNLAAA 664
Query: 556 HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKY-LCSSSQSQRMD-KNFDYTSKRECN 613
+ F+ + ++ L KAL + +E+ R + L + Q + K + S C
Sbjct: 665 VHKEMFI---MVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACY 721
Query: 614 ICLYDL----HLSAAFCPCS 629
C L H++ C CS
Sbjct: 722 DCPDGLVCLSHIND-LCKCS 740
Score = 140 (54.3 bits), Expect = 1.2e-50, Sum P(2) = 1.2e-50
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 131 EGAKNDVLE--EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKEN 188
E +D L E PVF P+ EF D L YIA +R +E+ GIC+I PP W+PP V+ +
Sbjct: 2 EPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVD 61
Query: 189 DIWKSSKFVTQIQQIDGLQNQ 209
+ +F +IQ+++ L+ Q
Sbjct: 62 NF----RFTPRIQRLNELEAQ 78
Score = 121 (47.7 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L ++ + F+ +R+C C LSA C PD CL+H
Sbjct: 673 VQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 732
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRP 698
+ LC C+ + + +RY + EL +L ++ + + WA + +++ L R
Sbjct: 733 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA-NKVRVALEVEDGRKRSLE 791
Query: 699 NSQAEESKQTE 709
+A ES+ E
Sbjct: 792 ELRALESEARE 802
Score = 56 (24.8 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 304 EPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSG----FPTVSNPCEASDHQKYLK 359
+P+ E +E +R+ + E EV E LE T G G PT +P ++Q L+
Sbjct: 1470 DPAREELEP--KRVRSSGPEAEEVQEEEELEEETGGEGPPAPIPTTGSP-STQENQNGLE 1526
Query: 360 SGWNLNNLPMLPGSLLS 376
+ P P S L+
Sbjct: 1527 PAEGTTSGPSAPFSTLT 1543
Score = 48 (22.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 345 VSNPCEASDHQKYLKSGWNLNNLP-MLPGSLLSSESCKT 382
+++ C+ S ++YL+ + L+ LP ML + +ES T
Sbjct: 733 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDT 771
Score = 40 (19.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 510 WLPHGQNAIELYREQGRKTSISHDKLLLGAARE 542
W + A+E+ E GRK S+ + L ARE
Sbjct: 772 WANKVRVALEV--EDGRKRSLEELRALESEARE 802
>UNIPROTKB|P41229 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AL139396
eggNOG:NOG327026 GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719
CTD:8242 OrthoDB:EOG4894KP EMBL:L25270 EMBL:AK304732 EMBL:BC054499
EMBL:Z29650 IPI:IPI00013185 IPI:IPI00219412 IPI:IPI00640875
IPI:IPI01012687 PIR:I54361 RefSeq:NP_001140174.1 RefSeq:NP_004178.2
UniGene:Hs.631768 PDB:2JRZ PDBsum:2JRZ ProteinModelPortal:P41229
SMR:P41229 DIP:DIP-39663N IntAct:P41229 STRING:P41229
PhosphoSite:P41229 DMDM:117949812 PaxDb:P41229 PRIDE:P41229
DNASU:8242 Ensembl:ENST00000375379 Ensembl:ENST00000375383
Ensembl:ENST00000375401 Ensembl:ENST00000452825 GeneID:8242
KEGG:hsa:8242 UCSC:uc004drz.3 GeneCards:GC0XM053237 HGNC:HGNC:11114
MIM:300534 MIM:314690 neXtProt:NX_P41229 Orphanet:85279
PharmGKB:PA35964 InParanoid:P41229 OMA:ISWQGRA PhylomeDB:P41229
ChiTaRS:KDM5C EvolutionaryTrace:P41229 GenomeRNAi:8242
NextBio:31002 ArrayExpress:P41229 Bgee:P41229 CleanEx:HS_JARID1C
Genevestigator:P41229 GermOnline:ENSG00000126012 Uniprot:P41229
Length = 1560
Score = 468 (169.8 bits), Expect = 1.2e-50, Sum P(2) = 1.2e-50
Identities = 122/380 (32%), Positives = 193/380 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD FK YF +M V P E +E E+ R
Sbjct: 384 GFE-QATREYTLQSFGEMADSFKADYF-----NMPVHMVPT----------ELVEKEFWR 427
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + + ++Y SGWNLN +P+L S+L
Sbjct: 428 LVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVL 487
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A +
Sbjct: 488 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE 547
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 548 VMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 607
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKK 555
G+N +E+VNF +WLP G+ IE YR R SH++L+ A + +++L
Sbjct: 608 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNLAAA 665
Query: 556 HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKY-LCSSSQSQRMD-KNFDYTSKRECN 613
+ F+ + ++ L KAL + +E+ R + L + Q + K + S C
Sbjct: 666 VHKEMFI---MVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACY 722
Query: 614 ICLYDL----HLSAAFCPCS 629
C L H++ C CS
Sbjct: 723 DCPDGLVCLSHIND-LCKCS 741
Score = 140 (54.3 bits), Expect = 1.2e-50, Sum P(2) = 1.2e-50
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 131 EGAKNDVLE--EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKEN 188
E +D L E PVF P+ EF D L YIA +R +E+ GIC+I PP W+PP V+ +
Sbjct: 2 EPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVD 61
Query: 189 DIWKSSKFVTQIQQIDGLQNQ 209
+ +F +IQ+++ L+ Q
Sbjct: 62 NF----RFTPRIQRLNELEAQ 78
Score = 121 (47.7 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L ++ + F+ +R+C C LSA C PD CL+H
Sbjct: 674 VQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 733
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRP 698
+ LC C+ + + +RY + EL +L ++ + + WA + +++ L R
Sbjct: 734 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA-NKVRVALEVEDGRKRSLE 792
Query: 699 NSQAEESKQTE 709
+A ES+ E
Sbjct: 793 ELRALESEARE 803
Score = 56 (24.8 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 304 EPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSG----FPTVSNPCEASDHQKYLK 359
+P+ E +E +R+ + E EV E LE T G G PT +P ++Q L+
Sbjct: 1471 DPAREELEP--KRVRSSGPEAEEVQEEEELEEETGGEGPPAPIPTTGSP-STQENQNGLE 1527
Query: 360 SGWNLNNLPMLPGSLLS 376
+ P P S L+
Sbjct: 1528 PAEGTTSGPSAPFSTLT 1544
Score = 48 (22.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 345 VSNPCEASDHQKYLKSGWNLNNLP-MLPGSLLSSESCKT 382
+++ C+ S ++YL+ + L+ LP ML + +ES T
Sbjct: 734 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDT 772
Score = 40 (19.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 510 WLPHGQNAIELYREQGRKTSISHDKLLLGAARE 542
W + A+E+ E GRK S+ + L ARE
Sbjct: 773 WANKVRVALEV--EDGRKRSLEELRALESEARE 803
>UNIPROTKB|K7GNM7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:FP102491
Ensembl:ENSSSCT00000032687 Uniprot:K7GNM7
Length = 1560
Score = 468 (169.8 bits), Expect = 1.2e-50, Sum P(2) = 1.2e-50
Identities = 122/380 (32%), Positives = 193/380 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD FK YF +M V P E +E E+ R
Sbjct: 384 GFE-QATREYTLQSFGEMADSFKADYF-----NMPVHMVPT----------ELVEKEFWR 427
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + + ++Y SGWNLN +P+L S+L
Sbjct: 428 LVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVL 487
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A +
Sbjct: 488 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE 547
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 548 VMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 607
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKK 555
G+N +E+VNF +WLP G+ IE YR R SH++L+ A + +++L
Sbjct: 608 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNLAAA 665
Query: 556 HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKY-LCSSSQSQRMD-KNFDYTSKRECN 613
+ F+ + ++ L KAL + +E+ R + L + Q + K + S C
Sbjct: 666 VHKEMFI---MVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACY 722
Query: 614 ICLYDL----HLSAAFCPCS 629
C L H++ C CS
Sbjct: 723 DCPDGLVCLSHIND-LCKCS 741
Score = 140 (54.3 bits), Expect = 1.2e-50, Sum P(2) = 1.2e-50
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 131 EGAKNDVLE--EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKEN 188
E +D L E PVF P+ EF D L YIA +R +E+ GIC+I PP W+PP V+ +
Sbjct: 2 EPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVD 61
Query: 189 DIWKSSKFVTQIQQIDGLQNQ 209
+ +F +IQ+++ L+ Q
Sbjct: 62 NF----RFTPRIQRLNELEAQ 78
Score = 121 (47.7 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L ++ + F+ +R+C C LSA C PD CL+H
Sbjct: 674 VQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 733
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRP 698
+ LC C+ + + +RY + EL +L ++ + + WA + +++ L R
Sbjct: 734 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA-NKVRVALEVEDGRKRSLE 792
Query: 699 NSQAEESKQTE 709
+A ES+ E
Sbjct: 793 ELRALESEARE 803
Score = 54 (24.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 27/89 (30%), Positives = 38/89 (42%)
Query: 304 EPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWN 363
+P+ E +E +R+ + E E E LE T G G P P A+ + N
Sbjct: 1471 DPAREELEP--KRVRSSGPEAEEAQEEEELEEETGGEGPP---QPLPATGSPSTQE---N 1522
Query: 364 LNNLPMLPGSLLSSESCKTCNLLVPRLHV 392
N L G+ SS S + L PRLH+
Sbjct: 1523 QNGLEPALGA--SSGSSVPFSTLTPRLHM 1549
Score = 48 (22.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 345 VSNPCEASDHQKYLKSGWNLNNLP-MLPGSLLSSESCKT 382
+++ C+ S ++YL+ + L+ LP ML + +ES T
Sbjct: 734 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDT 772
Score = 40 (19.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 510 WLPHGQNAIELYREQGRKTSISHDKLLLGAARE 542
W + A+E+ E GRK S+ + L ARE
Sbjct: 773 WANKVRVALEV--EDGRKRSLEELRALESEARE 803
>MGI|MGI:99781 [details] [associations]
symbol:Kdm5c "lysine (K)-specific demethylase 5C"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99781 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0032453
KO:K11446 CTD:8242 OrthoDB:EOG4894KP ChiTaRS:KDM5C EMBL:AF127245
EMBL:AK008105 EMBL:AK155279 EMBL:AK155427 EMBL:AK155651
EMBL:AK158340 EMBL:AK011577 EMBL:BC043096 EMBL:BC054550 EMBL:Z29651
EMBL:AK129096 EMBL:L29563 EMBL:AF039894 IPI:IPI00112611
IPI:IPI00221399 IPI:IPI00776021 PIR:I48775 PIR:I84689
RefSeq:NP_038696.2 UniGene:Mm.142655 ProteinModelPortal:P41230
SMR:P41230 STRING:P41230 PhosphoSite:P41230 PaxDb:P41230
PRIDE:P41230 Ensembl:ENSMUST00000082177 Ensembl:ENSMUST00000112584
Ensembl:ENSMUST00000112588 GeneID:20591 KEGG:mmu:20591
UCSC:uc009uqc.2 UCSC:uc009uqd.2 UCSC:uc009uqe.2 InParanoid:P41230
NextBio:298901 Bgee:P41230 Genevestigator:P41230
GermOnline:ENSMUSG00000025332 Uniprot:P41230
Length = 1554
Score = 468 (169.8 bits), Expect = 1.5e-50, Sum P(2) = 1.5e-50
Identities = 122/380 (32%), Positives = 193/380 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD FK YF +M V P E +E E+ R
Sbjct: 384 GFE-QATREYTLQSFGEMADSFKADYF-----NMPVHMVPT----------ELVEKEFWR 427
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + + ++Y SGWNLN +P+L S+L
Sbjct: 428 LVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVL 487
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A +
Sbjct: 488 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE 547
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 548 VMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 607
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKK 555
G+N +E+VNF +WLP G+ IE YR R SH++L+ A + +++L
Sbjct: 608 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNLAAA 665
Query: 556 HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKY-LCSSSQSQRMD-KNFDYTSKRECN 613
+ F+ + ++ L KAL + +E+ R + L + Q + K + S C
Sbjct: 666 VHKEMFI---MVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACY 722
Query: 614 ICLYDL----HLSAAFCPCS 629
C L H++ C CS
Sbjct: 723 DCPDGLVCLSHIND-LCKCS 741
Score = 139 (54.0 bits), Expect = 1.5e-50, Sum P(2) = 1.5e-50
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EF D L YIA +R +E+ GIC+I PP W+PP V+ ++ +F +
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNF----RFTPR 68
Query: 200 IQQIDGLQNQ 209
IQ+++ L+ Q
Sbjct: 69 IQRLNELEAQ 78
Score = 121 (47.7 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L ++ + F+ +R+C C LSA C PD CL+H
Sbjct: 674 VQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 733
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRP 698
+ LC C+ + + +RY + EL +L ++ + + WA + +++ L R
Sbjct: 734 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA-NKVRVALEVEDGRKRSLE 792
Query: 699 NSQAEESKQTE 709
+A ES+ E
Sbjct: 793 ELRALESEARE 803
Score = 48 (22.0 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 345 VSNPCEASDHQKYLKSGWNLNNLP-MLPGSLLSSESCKT 382
+++ C+ S ++YL+ + L+ LP ML + +ES T
Sbjct: 734 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDT 772
Score = 40 (19.1 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 510 WLPHGQNAIELYREQGRKTSISHDKLLLGAARE 542
W + A+E+ E GRK S+ + L ARE
Sbjct: 773 WANKVRVALEV--EDGRKRSLEELRALESEARE 803
>UNIPROTKB|D4A3B4 [details] [associations]
symbol:D4A3B4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00949627
Ensembl:ENSRNOT00000067288 ArrayExpress:D4A3B4 Uniprot:D4A3B4
Length = 1490
Score = 470 (170.5 bits), Expect = 1.5e-50, Sum P(2) = 1.5e-50
Identities = 118/360 (32%), Positives = 187/360 (51%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD FK YF +M V P E +E E+ R
Sbjct: 343 GFE-QATREYTLQSFGEMADSFKADYF-----NMPVHMVPT----------ELVEKEFWR 386
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + + ++Y SGWNLN +P+L S+L
Sbjct: 387 LVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVL 446
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A +
Sbjct: 447 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE 506
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 507 VMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 566
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKK 555
G+N +E+VNF +WLP G+ IE YR R SH++L+ A + +++L
Sbjct: 567 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNLAAA 624
Query: 556 HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKRECNIC 615
+ F+ + ++ L KAL + SE+ +R+ L + + R+ N T N C
Sbjct: 625 VHKEMFI---MVQEERRLRKALLEKGLSEA-KRQGLKTEPKDVRLCINCVTTEMMSANPC 680
Score = 136 (52.9 bits), Expect = 1.5e-50, Sum P(2) = 1.5e-50
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EF D L YIA +R +E+ GIC+I PP W+PP V+ ++ +F +
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNF----RFTPR 68
Query: 200 IQQIDGLQ 207
IQ+++ L+
Sbjct: 69 IQRLNELE 76
Score = 93 (37.8 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 30/131 (22%), Positives = 55/131 (41%)
Query: 581 INSESNRRKYLCSS--SQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L S+++R + R C C+ +SA C P ++ ++H
Sbjct: 633 VQEERRLRKALLEKGLSEAKRQGLKTEPKDVRLCINCVTTEMMSANPCFVKPFVFILISH 692
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRP 698
LC C+ + + RY + EL +L ++ + + WA +++ L R
Sbjct: 693 XNGLCKCSSSRQYLRSRYTLDELPAMLHKLKVRAESFDTWATK-VRVALEVEDGRKRSLE 751
Query: 699 NSQAEESKQTE 709
+A ES+ E
Sbjct: 752 ELRALESEARE 762
Score = 52 (23.4 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 349 CEASDHQKYLKSGWNLNNLP-MLPGSLLSSESCKT 382
C+ S ++YL+S + L+ LP ML + +ES T
Sbjct: 697 CKCSSSRQYLRSRYTLDELPAMLHKLKVRAESFDT 731
Score = 41 (19.5 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 510 WLPHGQNAIELYREQGRKTSISHDKLLLGAARE 542
W + A+E+ E GRK S+ + L ARE
Sbjct: 732 WATKVRVALEV--EDGRKRSLEELRALESEARE 762
>UNIPROTKB|G4N2P7 [details] [associations]
symbol:MGG_04878 "Lid2 complex component lid2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00184
SMART:SM00249 SMART:SM00501 SMART:SM00558 GO:GO:0005634
EMBL:CM001233 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 RefSeq:XP_003712359.1 EnsemblFungi:MGG_04878T0
GeneID:2675627 KEGG:mgr:MGG_04878 Uniprot:G4N2P7
Length = 1755
Score = 462 (167.7 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
Identities = 134/435 (30%), Positives = 202/435 (46%)
Query: 253 RCTEG---FESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLEN 309
RC G F E G ++L+ F++ A DFK+ YF K M VD + E ++
Sbjct: 506 RCLVGDGRFGFEEGGLYSLKQFQERAADFKQSYFEKK---MPVDPQLNCHRPVTE---DD 559
Query: 310 IEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPM 369
+E E+ R++ + E +EV YG ++ T GSGFPT E + Y WNLN LP+
Sbjct: 560 VEREFWRLVSSIEETVEVEYGADIHCTTHGSGFPTA----EKNPDDPYSTDPWNLNILPL 615
Query: 370 LPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRY 429
P SL + VP ++VGM F++ W E+H S Y H GA K W+ IP
Sbjct: 616 HPESLFRYIKSDISGMTVPWVYVGMIFSTFCWHNEDHYSYSANYQHFGATKTWYGIPGED 675
Query: 430 AVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSY 489
A KF+AA ++ +P L Q + V L P LK GV VY Q G+FV+ F +Y
Sbjct: 676 AEKFEAAMREAIPELFATQPDLLFQLVTLLPPEQLKKAGVRVYAIDQRAGQFVITFPQAY 735
Query: 490 YSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWE 549
++GF+ GFN +E+VNFAP +W P G +E ++ R+ SHD+LL AA +
Sbjct: 736 HAGFNHGFNFNEAVNFAPSDWEPFGLAGVERLQQFRRQPCFSHDELLWTAAEGIASGGLT 795
Query: 550 ISLVK--KHTSDNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYT 607
I K + R ++ + + K +S + S S +++
Sbjct: 796 IQTAKWLAPALERIHSRELAQRQAFVTKHKDLAQHSCAITGGEDSSCLLSFKVEDEDVPE 855
Query: 608 SKRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLFRYEISELNVLL-E 666
+ +C C +LS C S + CL H C E+ L + + +V+L
Sbjct: 856 EEYQCGYCKVYTYLSRFKCLKSGQVL-CLLHAGHHACCDAPEQNRL----LGDQHVILYR 910
Query: 667 AVEGKLSAVYRWAKD 681
E ++A Y+ D
Sbjct: 911 KAEDIIAATYKKVAD 925
Score = 147 (56.8 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
Identities = 27/70 (38%), Positives = 45/70 (64%)
Query: 138 LEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFV 197
+EEAP +YPT EEF + + Y+ + ++ +YGIC+IVPP +W PP + D K F
Sbjct: 92 VEEAPTYYPTAEEFKEPMAYMRKIAPEARKYGICKIVPPDTWNPPFAI---DTQKFH-FR 147
Query: 198 TQIQQIDGLQ 207
T+ Q+++ ++
Sbjct: 148 TRKQELNSVE 157
Score = 42 (19.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 611 ECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLFRYEISELNVLLEAVEG 670
E N +LH + P P + ++ +K+F +Y + ++ L E+V G
Sbjct: 1463 ETNFFRRELHKWSPVAPQPPPMVEVSKSTRKPRPTK-LQKLFT-QYGVDNVDDLPESVRG 1520
Query: 671 KLSAVYRWA 679
K +++ R A
Sbjct: 1521 KANSLKRKA 1529
Score = 41 (19.5 bits), Expect = 2.3e-39, Sum P(2) = 2.3e-39
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 186 KENDIWKSSKFVTQIQQIDGLQNQYFSSKAAKIYDNVNSNSKRRRSLNTGLQN 238
K D++K K V + G S K A+I ++ + K SL+T L+N
Sbjct: 189 KPLDLYKLKKAV---ENRGGFDKVCKSKKWAEIGRDLGYSGKIMSSLSTSLKN 238
>UNIPROTKB|F1RUI7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 OMA:ISWQGRA
EMBL:FP102491 Ensembl:ENSSSCT00000013473 ArrayExpress:F1RUI7
Uniprot:F1RUI7
Length = 1516
Score = 468 (169.8 bits), Expect = 2.2e-50, Sum P(2) = 2.2e-50
Identities = 122/380 (32%), Positives = 193/380 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD FK YF +M V P E +E E+ R
Sbjct: 343 GFE-QATREYTLQSFGEMADSFKADYF-----NMPVHMVPT----------ELVEKEFWR 386
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + + ++Y SGWNLN +P+L S+L
Sbjct: 387 LVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVL 446
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A +
Sbjct: 447 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE 506
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 507 VMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 566
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKK 555
G+N +E+VNF +WLP G+ IE YR R SH++L+ A + +++L
Sbjct: 567 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNLAAA 624
Query: 556 HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKY-LCSSSQSQRMD-KNFDYTSKRECN 613
+ F+ + ++ L KAL + +E+ R + L + Q + K + S C
Sbjct: 625 VHKEMFI---MVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACY 681
Query: 614 ICLYDL----HLSAAFCPCS 629
C L H++ C CS
Sbjct: 682 DCPDGLVCLSHIND-LCKCS 700
Score = 137 (53.3 bits), Expect = 2.2e-50, Sum P(2) = 2.2e-50
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 131 EGAKNDVLE--EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKEN 188
E +D L E PVF P+ EF D L YIA +R +E+ GIC+I PP W+PP V+ +
Sbjct: 2 EPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVD 61
Query: 189 DIWKSSKFVTQIQQIDGLQ 207
+ +F +IQ+++ L+
Sbjct: 62 NF----RFTPRIQRLNELE 76
Score = 121 (47.7 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L ++ + F+ +R+C C LSA C PD CL+H
Sbjct: 633 VQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 692
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRP 698
+ LC C+ + + +RY + EL +L ++ + + WA + +++ L R
Sbjct: 693 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA-NKVRVALEVEDGRKRSLE 751
Query: 699 NSQAEESKQTE 709
+A ES+ E
Sbjct: 752 ELRALESEARE 762
Score = 54 (24.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 27/89 (30%), Positives = 38/89 (42%)
Query: 304 EPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWN 363
+P+ E +E +R+ + E E E LE T G G P P A+ + N
Sbjct: 1427 DPAREELEP--KRVRSSGPEAEEAQEEEELEEETGGEGPP---QPLPATGSPSTQE---N 1478
Query: 364 LNNLPMLPGSLLSSESCKTCNLLVPRLHV 392
N L G+ SS S + L PRLH+
Sbjct: 1479 QNGLEPALGA--SSGSSVPFSTLTPRLHM 1505
Score = 48 (22.0 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 345 VSNPCEASDHQKYLKSGWNLNNLP-MLPGSLLSSESCKT 382
+++ C+ S ++YL+ + L+ LP ML + +ES T
Sbjct: 693 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDT 731
Score = 40 (19.1 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 510 WLPHGQNAIELYREQGRKTSISHDKLLLGAARE 542
W + A+E+ E GRK S+ + L ARE
Sbjct: 732 WANKVRVALEV--EDGRKRSLEELRALESEARE 762
>UNIPROTKB|Q9BY66 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0007283 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 DrugBank:DB00126
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:CH471202 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:U52191 EMBL:D87072 EMBL:AF273841 EMBL:AC010889
EMBL:BC132721 EMBL:BC144102 EMBL:BC146767 EMBL:U52365 EMBL:AF134849
IPI:IPI00219940 IPI:IPI00329577 IPI:IPI00922879
RefSeq:NP_001140177.1 RefSeq:NP_001140178.1 RefSeq:NP_004644.2
UniGene:Hs.80358 PDB:2E6R PDB:2YQE PDBsum:2E6R PDBsum:2YQE
ProteinModelPortal:Q9BY66 SMR:Q9BY66 IntAct:Q9BY66 STRING:Q9BY66
PhosphoSite:Q9BY66 DMDM:17368706 PaxDb:Q9BY66 PRIDE:Q9BY66
Ensembl:ENST00000317961 Ensembl:ENST00000382806
Ensembl:ENST00000541639 GeneID:8284 KEGG:hsa:8284 UCSC:uc004fug.3
UCSC:uc010nwy.3 GeneCards:GC0YM021865 HGNC:HGNC:11115 MIM:426000
neXtProt:NX_Q9BY66 PharmGKB:PA35965 InParanoid:Q9BY66 OMA:TEMVERE
PhylomeDB:Q9BY66 ChiTaRS:KDM5D EvolutionaryTrace:Q9BY66
GenomeRNAi:8284 NextBio:31049 ArrayExpress:Q9BY66 Bgee:Q9BY66
CleanEx:HS_JARID1D Genevestigator:Q9BY66 GermOnline:ENSG00000012817
Uniprot:Q9BY66
Length = 1539
Score = 464 (168.4 bits), Expect = 4.4e-50, Sum P(2) = 4.4e-50
Identities = 124/382 (32%), Positives = 194/382 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E++L++F + AD FK YF +M V P E +E E+ R
Sbjct: 374 GFE-QATQEYSLQSFGEMADSFKSDYF-----NMPVHMVPT----------ELVEKEFWR 417
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQK-YLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP ++ S +K Y SGWNLN +P+L S+L
Sbjct: 418 LVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMPVLDQSVL 477
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A +
Sbjct: 478 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE 537
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
K P L Q ++ V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 538 VMKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 597
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLL--LGAAREVVKTQWEISLV 553
G+N +E+VNF +WLP G+ IE YR R SH++L+ + A E + +++
Sbjct: 598 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVH 657
Query: 554 KKHTSDNFMWRHVSGKDGILAKALKSRINSESNRRKY-LCSSSQSQRMD-KNFDYTSKRE 611
K+ M+ V ++ L KAL + +E+ R + L + Q + K + S
Sbjct: 658 KE------MFIMVQ-EERRLRKALLEKGVTEAEREAFELLPDDERQCIKCKTTCFLSALA 710
Query: 612 CNICLYDL----HLSAAFCPCS 629
C C L H++ C CS
Sbjct: 711 CYDCPDGLVCLSHIND-LCKCS 731
Score = 139 (54.0 bits), Expect = 4.4e-50, Sum P(2) = 4.4e-50
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EF D L YIA +R +E+ GIC+I PP W+PP V+ ++ +F +
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNF----RFTPR 68
Query: 200 IQQIDGLQNQ 209
+Q+++ L+ Q
Sbjct: 69 VQRLNELEAQ 78
Score = 120 (47.3 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L ++ + F+ +R+C C LSA C PD CL+H
Sbjct: 664 VQEERRLRKALLEKGVTEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 723
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRP 698
+ LC C+ + + +RY + EL +L ++ + + WA + +++ L R
Sbjct: 724 INDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWA-NKVRVALEVEDGRKRSFE 782
Query: 699 NSQAEESKQTE 709
+A ES+ E
Sbjct: 783 ELRALESEARE 793
Score = 49 (22.3 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 345 VSNPCEASDHQKYLKSGWNLNNLP-MLPGSLLSSESCKT 382
+++ C+ S ++YL+ + L+ LP ML + +ES T
Sbjct: 724 INDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDT 762
Score = 38 (18.4 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 510 WLPHGQNAIELYREQGRKTSISHDKLLLGAARE 542
W + A+E+ E GRK S + L ARE
Sbjct: 763 WANKVRVALEV--EDGRKRSFEELRALESEARE 793
>MGI|MGI:99780 [details] [associations]
symbol:Kdm5d "lysine (K)-specific demethylase 5D"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99780 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:AF127244 EMBL:AK140971 EMBL:BC059077 EMBL:Z29652
IPI:IPI00123375 IPI:IPI00848809 IPI:IPI00848997 IPI:IPI00850747
PIR:I48776 RefSeq:NP_035549.1 UniGene:Mm.262676
ProteinModelPortal:Q62240 SMR:Q62240 STRING:Q62240
PhosphoSite:Q62240 PRIDE:Q62240 Ensembl:ENSMUST00000055032
GeneID:20592 KEGG:mmu:20592 UCSC:uc009uyz.1 UCSC:uc009uzb.1
InParanoid:Q62240 NextBio:298905 Bgee:Q62240 Genevestigator:Q62240
GermOnline:ENSMUSG00000056673 Uniprot:Q62240
Length = 1548
Score = 464 (168.4 bits), Expect = 4.5e-50, Sum P(2) = 4.5e-50
Identities = 124/380 (32%), Positives = 191/380 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD FK YF +M V P E +E E+ R
Sbjct: 383 GFE-QATQEYTLQSFGEMADSFKADYF-----NMPVHMVPT----------EVVEKEFWR 426
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQK-YLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP ++ + S +K Y GWNLN +P+L S+L
Sbjct: 427 LVSSIEEDVTVEYGADIHSKEFGSGFPVNNSKWDLSPEEKEYAACGWNLNVMPVLDQSVL 486
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A +
Sbjct: 487 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLED 546
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
K+ P L Q ++ V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 547 VMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 606
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKK 555
G+N +E+VNF +WLP G+ IE YR R SH++L+ A K ++ V
Sbjct: 607 GYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLA-VAV 665
Query: 556 HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKY-LCSSSQSQRMD-KNFDYTSKRECN 613
H M+ V ++ L K L + +E+ R + L + Q + K + S C
Sbjct: 666 HKE---MFIMVQ-EERRLRKTLLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACY 721
Query: 614 ICLYDL----HLSAAFCPCS 629
C L H++ C CS
Sbjct: 722 DCPDSLVCLSHIND-LCKCS 740
Score = 139 (54.0 bits), Expect = 4.5e-50, Sum P(2) = 4.5e-50
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EF D L YIA +R +E+ GIC+I PP W+PP V+ ++ +F +
Sbjct: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNF----RFTPR 68
Query: 200 IQQIDGLQNQ 209
IQ+++ L+ Q
Sbjct: 69 IQRLNELEAQ 78
Score = 121 (47.7 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L ++ + F+ +R+C C LSA C PD CL+H
Sbjct: 673 VQEERRLRKTLLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDSLVCLSH 732
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWA 679
+ LC C+ + +RY + EL +L+ ++ + + WA
Sbjct: 733 INDLCKCSRNRQYLRYRYTLDELPAMLQKLKIRAESFDNWA 773
Score = 48 (22.0 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 345 VSNPCEASDHQKYLKSGWNLNNLP-MLPGSLLSSES 379
+++ C+ S +++YL+ + L+ LP ML + +ES
Sbjct: 733 INDLCKCSRNRQYLRYRYTLDELPAMLQKLKIRAES 768
Score = 38 (18.4 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 447 KQSKWHNRWVASLSPSPLKS 466
K+ H R + S PSP+ S
Sbjct: 1154 KEGILHLRHINSAKPSPMSS 1173
>UNIPROTKB|E9PFH2 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D IPI:IPI00644955
ProteinModelPortal:E9PFH2 SMR:E9PFH2 PRIDE:E9PFH2
Ensembl:ENST00000440077 ArrayExpress:E9PFH2 Bgee:E9PFH2
Uniprot:E9PFH2
Length = 1476
Score = 464 (168.4 bits), Expect = 7.9e-50, Sum P(2) = 7.9e-50
Identities = 124/382 (32%), Positives = 194/382 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E++L++F + AD FK YF +M V P E +E E+ R
Sbjct: 333 GFE-QATQEYSLQSFGEMADSFKSDYF-----NMPVHMVPT----------ELVEKEFWR 376
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQK-YLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP ++ S +K Y SGWNLN +P+L S+L
Sbjct: 377 LVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMPVLDQSVL 436
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A +
Sbjct: 437 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE 496
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
K P L Q ++ V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 497 VMKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 556
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLL--LGAAREVVKTQWEISLV 553
G+N +E+VNF +WLP G+ IE YR R SH++L+ + A E + +++
Sbjct: 557 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVH 616
Query: 554 KKHTSDNFMWRHVSGKDGILAKALKSRINSESNRRKY-LCSSSQSQRMD-KNFDYTSKRE 611
K+ M+ V ++ L KAL + +E+ R + L + Q + K + S
Sbjct: 617 KE------MFIMVQ-EERRLRKALLEKGVTEAEREAFELLPDDERQCIKCKTTCFLSALA 669
Query: 612 CNICLYDL----HLSAAFCPCS 629
C C L H++ C CS
Sbjct: 670 CYDCPDGLVCLSHIND-LCKCS 690
Score = 136 (52.9 bits), Expect = 7.9e-50, Sum P(2) = 7.9e-50
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EF D L YIA +R +E+ GIC+I PP W+PP V+ ++ +F +
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNF----RFTPR 68
Query: 200 IQQIDGLQ 207
+Q+++ L+
Sbjct: 69 VQRLNELE 76
Score = 120 (47.3 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L ++ + F+ +R+C C LSA C PD CL+H
Sbjct: 623 VQEERRLRKALLEKGVTEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 682
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRP 698
+ LC C+ + + +RY + EL +L ++ + + WA + +++ L R
Sbjct: 683 INDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWA-NKVRVALEVEDGRKRSFE 741
Query: 699 NSQAEESKQTE 709
+A ES+ E
Sbjct: 742 ELRALESEARE 752
Score = 49 (22.3 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 345 VSNPCEASDHQKYLKSGWNLNNLP-MLPGSLLSSESCKT 382
+++ C+ S ++YL+ + L+ LP ML + +ES T
Sbjct: 683 INDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDT 721
Score = 38 (18.4 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 510 WLPHGQNAIELYREQGRKTSISHDKLLLGAARE 542
W + A+E+ E GRK S + L ARE
Sbjct: 722 WANKVRVALEV--EDGRKRSFEELRALESEARE 752
>POMBASE|SPAC1002.05c [details] [associations]
symbol:jmj2 "histone demethylase Jmj2" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=ISM] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016577 "histone demethylation"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IMP;IDA] [GO:0034648 "histone
demethylase activity (H3-dimethyl-K4 specific)" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 PomBase:SPAC1002.05c
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0008270
GO:GO:0006338 GO:GO:0000122 GO:GO:0000790 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0051864
eggNOG:NOG327026 GO:GO:0034647 OMA:RNISGMT OrthoDB:EOG44N21B
RefSeq:NP_593492.1 ProteinModelPortal:Q9US53
EnsemblFungi:SPAC1002.05c.1 GeneID:2543275 KEGG:spo:SPAC1002.05c
NextBio:20804296 Uniprot:Q9US53
Length = 715
Score = 415 (151.1 bits), Expect = 1.4e-49, Sum P(3) = 1.4e-49
Identities = 134/439 (30%), Positives = 208/439 (47%)
Query: 206 LQNQYFSSKAAKIYDNVNSNSKRR-RSLNTGLQNGVGGNGC--TMNLD-EARCTEGFESE 261
++ QY + DN + N KRR SL+T N + N C +N + E C E + ++
Sbjct: 277 IKQQYMPADNFGSNDNHSHNKKRRLSSLSTN-NNHLCDN-CHKPVNCEVEDTCKEAYCTK 334
Query: 262 R--GP-EFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRRII 318
P EF ET Y E+Y C +N K E + + +E EY +++
Sbjct: 335 CIINPYEFGFETGNYYTLSNFEKY-CDN-----FKKNYFSKFKDSEITEDIVEKEYWKLV 388
Query: 319 ENPTEEIEVLYGENLETGTFGSGFPTVS-NPCEASDHQKYLKSGWNLNNLPMLPGSLLSS 377
++ +EV YG +L T GS FP+++ NP Y K WNLN + GSLLS
Sbjct: 389 KDNNTSLEVEYGADLSTLDQGSAFPSLAKNPVNP-----YSKDTWNLNVIASTNGSLLSY 443
Query: 378 ESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAA 437
+ P L+VGMCF++ W VE++ S+ Y H G K+W+ IP A +F+ AA
Sbjct: 444 IDNPVSGITCPWLYVGMCFSTFCWHVEDNYTYSVNYQHYGDTKLWYGIPGDQAERFERAA 503
Query: 438 KKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGF 497
P L KQ + ++P L+ GV VY Q P EFV+ F S+++G + GF
Sbjct: 504 LDIAPDLVKKQKDLLYQLATMINPDELQKRGVDVYFIDQGPNEFVITFPKSFHAGINHGF 563
Query: 498 NCSESVNFAPIEWLPHG--QNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKK 555
N +E+VNFAP +WL +G N + Y+ + +SHD L+ A EIS+
Sbjct: 564 NINEAVNFAPKDWLLNGFSLNGVLKYQSLLKPPVLSHDMLVYNLATNPAS---EISV--- 617
Query: 556 HTSDNFMWRHVSGKDGI-LAKALKSRINSESNRRKYLCSSSQSQRMD--KNFDYTSKREC 612
S+ W H + K + + ++ R + + + L +++ + K F Y S+ C
Sbjct: 618 --SELRPWVHEAVKRELGIRIMIRGRYDLKEILYRELMEDAENWQCQHCKAFSYFSQVAC 675
Query: 613 N---ICLYDLHLSAAFCPC 628
+ I + LH+ C C
Sbjct: 676 SCKSITVCPLHIEY-LCKC 693
Score = 141 (54.7 bits), Expect = 1.4e-49, Sum P(3) = 1.4e-49
Identities = 36/106 (33%), Positives = 50/106 (47%)
Query: 84 QSDNNQKESNFEQPVEELSSRATLPKGV-IRGCPDCSNCLKVTARWSPEGAKNDVLEEAP 142
+S +Q +F Q P G+ RG + S+ K T + L AP
Sbjct: 3 KSTFHQTSPSFVQYTHATDKLKPAPHGMNTRG-NNLSSMSKNTGQRKQRSKSIHGLPVAP 61
Query: 143 VFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKEN 188
VFYP +EEF D++ YI + E+YGI +IVPP W PP + N
Sbjct: 62 VFYPDKEEFQDSIGYINKIAPIGEKYGIIKIVPPAGWNPPMQLDMN 107
Score = 70 (29.7 bits), Expect = 1.4e-49, Sum P(3) = 1.4e-49
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 611 ECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLFRYEISELNVLL 665
+C C + S C C I C H++ LC C + K + + +EL LL
Sbjct: 660 QCQHCKAFSYFSQVACSCK-SITVCPLHIEYLCKCDLSNKTLRLKVDDNELQKLL 713
>UNIPROTKB|A1YVX4 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
KO:K11446 CTD:8242 EMBL:EF139241 RefSeq:NP_001090902.1
UniGene:Ssc.25162 ProteinModelPortal:A1YVX4 SMR:A1YVX4
GeneID:100037295 KEGG:ssc:100037295 Uniprot:A1YVX4
Length = 1516
Score = 460 (167.0 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 121/380 (31%), Positives = 192/380 (50%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E+TL++F + AD FK Y +M V P E +E E+ R
Sbjct: 343 GFE-QATREYTLQSFGEMADSFKADYS-----NMPVHMVPT----------ELVEKEFWR 386
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ + E++ V YG ++ + FGSGFP + + + ++Y SGWNLN +P+L S+L
Sbjct: 387 LVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVL 446
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + VP L+VGM F++ W +E+H S+ Y+H G PK W+ +P A +
Sbjct: 447 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE 506
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L S GVPV R Q GEFV+ F +Y+SGF+
Sbjct: 507 VMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 566
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKK 555
G+N +E+VNF +WLP G+ IE YR R SH++L+ A + +++L
Sbjct: 567 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA--ACPEKLDLNLAAA 624
Query: 556 HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKY-LCSSSQSQRMD-KNFDYTSKRECN 613
+ F+ + ++ L KAL + +E+ R + L + Q + K + S C
Sbjct: 625 VHKEMFI---MVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACY 681
Query: 614 ICLYDL----HLSAAFCPCS 629
C L H++ C CS
Sbjct: 682 DCPDGLVCLSHIND-LCKCS 700
Score = 137 (53.3 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 131 EGAKNDVLE--EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKEN 188
E +D L E PVF P+ EF D L YIA +R +E+ GIC+I PP W+PP V+ +
Sbjct: 2 EPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVD 61
Query: 189 DIWKSSKFVTQIQQIDGLQ 207
+ +F +IQ+++ L+
Sbjct: 62 NF----RFTPRIQRLNELE 76
Score = 121 (47.7 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 581 INSESNRRKYLCSSSQSQRMDKNFDYT--SKRECNICLYDLHLSAAFCPCSPDIYSCLNH 638
+ E RK L ++ + F+ +R+C C LSA C PD CL+H
Sbjct: 633 VQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH 692
Query: 639 VKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRP 698
+ LC C+ + + +RY + EL +L ++ + + WA + +++ L R
Sbjct: 693 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWA-NKVRVALEVEDGRKRSLE 751
Query: 699 NSQAEESKQTE 709
+A ES+ E
Sbjct: 752 ELRALESEARE 762
Score = 48 (22.0 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 345 VSNPCEASDHQKYLKSGWNLNNLP-MLPGSLLSSESCKT 382
+++ C+ S ++YL+ + L+ LP ML + +ES T
Sbjct: 693 INDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDT 731
Score = 40 (19.1 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 510 WLPHGQNAIELYREQGRKTSISHDKLLLGAARE 542
W + A+E+ E GRK S+ + L ARE
Sbjct: 732 WANKVRVALEV--EDGRKRSLEELRALESEARE 762
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 504 (182.5 bits), Expect = 2.2e-45, P = 2.2e-45
Identities = 124/384 (32%), Positives = 196/384 (51%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + ++TL TF + AD FK YF +M V P E +E E+ R
Sbjct: 211 GFE-QAARDYTLRTFGEMADAFKSDYF-----NMPVHMVPT----------ELVEKEFWR 254
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ E++ V YG ++ + FGSGFP + S + ++YL SGWNLNN+P++ S+L
Sbjct: 255 LVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVL 314
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + C + +P L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 315 AHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLEN 374
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L + VPVYR Q GEFV+ F +Y+SGF+
Sbjct: 375 VMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQ 434
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREV-VKTQWEISLVK 554
GFN +E+VNF ++WLP G+ +E YR R SHD+++ A + V S V+
Sbjct: 435 GFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQ 494
Query: 555 KHTS----DNFMWRHVSGKDGIL-AKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSK 609
K + D R K G++ ++ + + + R+ C ++ + K
Sbjct: 495 KDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQ---CVKCKTTCFMSAISCSCK 551
Query: 610 RECNICLYDLHLSAAFCPCSPDIY 633
+CL+ H+ C C P Y
Sbjct: 552 PGLLVCLH--HVKE-LCSCPPYKY 572
Score = 137 (53.3 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 597 SQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLFRY 656
S+RMD +R+C C +SA C C P + CL+HVK+LCSC + +RY
Sbjct: 519 SERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCSCPPYKYKLRYRY 578
Query: 657 EISELNVLLEAVEGKLSAVYRWA 679
+ +L ++ A++ + + WA
Sbjct: 579 TLDDLYPMMNALKLRAESYNEWA 601
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 504 (182.5 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 124/384 (32%), Positives = 196/384 (51%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + ++TL TF + AD FK YF +M V P E +E E+ R
Sbjct: 301 GFE-QAARDYTLRTFGEMADAFKSDYF-----NMPVHMVPT----------ELVEKEFWR 344
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEAS-DHQKYLKSGWNLNNLPMLPGSLL 375
++ E++ V YG ++ + FGSGFP + S + ++YL SGWNLNN+P++ S+L
Sbjct: 345 LVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVL 404
Query: 376 SSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDA 435
+ + C + +P L+VGMCF+S W +E+H S+ Y+H G PK W+ +P A + +
Sbjct: 405 AHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLEN 464
Query: 436 AAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
KK P L Q ++ V ++P+ L + VPVYR Q GEFV+ F +Y+SGF+
Sbjct: 465 VMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQ 524
Query: 496 GFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREV-VKTQWEISLVK 554
GFN +E+VNF ++WLP G+ +E YR R SHD+++ A + V S V+
Sbjct: 525 GFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQ 584
Query: 555 KHTS----DNFMWRHVSGKDGIL-AKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSK 609
K + D R K G++ ++ + + + R+ C ++ + K
Sbjct: 585 KDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQ---CIKCKTTCFMSAISCSCK 641
Query: 610 RECNICLYDLHLSAAFCPCSPDIY 633
+CL+ H+ C C P Y
Sbjct: 642 PGLLVCLH--HVKE-LCSCPPYKY 662
Score = 137 (53.3 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 597 SQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEKIFLFRY 656
S+RMD +R+C C +SA C C P + CL+HVK+LCSC + +RY
Sbjct: 609 SERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVKELCSCPPYKYKLRYRY 668
Query: 657 EISELNVLLEAVEGKLSAVYRWA 679
+ +L ++ A++ + + WA
Sbjct: 669 TLDDLYPMMNALKLRAESYNEWA 691
>UNIPROTKB|I3L8V3 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0016706 GeneTree:ENSGT00530000063118 EMBL:FP102715
Ensembl:ENSSSCT00000023353 Uniprot:I3L8V3
Length = 583
Score = 458 (166.3 bits), Expect = 6.9e-43, P = 6.9e-43
Identities = 120/397 (30%), Positives = 199/397 (50%)
Query: 308 ENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEA-SDHQKYLKSGWNLNN 366
E +E E+ R++ + E++ V YG ++ + FGSGFP + + ++Y SGWNLNN
Sbjct: 5 ELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWNLNN 64
Query: 367 LPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIP 426
+P+L S+L+ + + VP L+VGMCF+S W +E+H S+ Y+H G PK W+ +P
Sbjct: 65 MPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVP 124
Query: 427 QRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFS 486
A + + ++ P L Q ++ V ++P+ L GVPVYR Q GEFV+ F
Sbjct: 125 SHAAEQLEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFP 184
Query: 487 GSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLL--LGAAREVV 544
+Y+SGF+ G+N +E+VNF +WLP G+ + YR R SH++L+ + A E +
Sbjct: 185 RAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECL 244
Query: 545 KTQWEISLVKK---HTSDNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRMD 601
+ K+ T + R + G+L + + R+ CS+ ++
Sbjct: 245 DVGLAAMVCKELTLMTEEETRLRESVVQMGVLMSEEEVFELVPDDERQ--CSACRTTCFL 302
Query: 602 KNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNH---VKQLCSCAWTEKIFLFRYEI 658
+ E +CLY H CPC P CL + ++ L S + K+ Y+
Sbjct: 303 SALTCSCNPERLVCLY--H-PTDLCPC-PMQKKCLRYRYPLEDLPSLLYGVKVRAQSYD- 357
Query: 659 SELNVLLEAVEGKLSAVYRWAKD--DLKMYLHSYSSR 693
+ ++ + EA LSA + KD +L++ L R
Sbjct: 358 TWVSRVTEA----LSASFNHKKDLIELRVMLEDAEDR 390
>CGD|CAL0000662 [details] [associations]
symbol:orf19.5651 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0000662
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACQ01000129 EMBL:AACQ01000128 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 RefSeq:XP_713332.1
RefSeq:XP_713379.1 ProteinModelPortal:Q59UR9 STRING:Q59UR9
GeneID:3644970 GeneID:3645037 KEGG:cal:CaO19.13096
KEGG:cal:CaO19.5651 Uniprot:Q59UR9
Length = 723
Score = 407 (148.3 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 109/353 (30%), Positives = 176/353 (49%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GF+ + ++T+ F K DF ++ N NPL S+++IE ++
Sbjct: 232 GFDEDVDVKYTIPEFYKMCQDFDAKFIRDYN-----QNNPL--------SVDDIERKFWS 278
Query: 317 IIENPTEEIEVLYG---ENLETGTFGSGFPTVSNPC-EASDH--QKYLKSGWNLNNLPML 370
++ ++EV YG NL G SGFP P + +D Q Y+ WNLN LP
Sbjct: 279 FVDAEKSDLEVKYGADIHNLRPGEV-SGFPMADTPSLDTTDPAIQYYINHPWNLNKLPFS 337
Query: 371 PGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYA 430
GSLL+ + + +P +++G ++ W VE+H S Y H GA K W+ IP +A
Sbjct: 338 NGSLLNFINTSISGMTIPWIYIGSLLSTFCWHVEDHYTLSANYCHFGATKKWYGIPSSFA 397
Query: 431 VKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYY 490
KF+ + P L +Q ++ V +SPS L G+P Q+ EFV+ + Y+
Sbjct: 398 DKFEKLMRDSAPDLFKRQPDLLHQLVTLMSPSKLVEHGIPCVYADQNSNEFVITYPLVYH 457
Query: 491 SGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGA-AREVVKTQWE 549
+GF+CGFN +E+VNFA EWL G+ ++ YR ++ +H +LL +R K
Sbjct: 458 AGFNCGFNFNEAVNFAIDEWLEFGEKSVNDYRPIKKENVFNHYELLENILSRFNAKHDVS 517
Query: 550 ISLVKKHTSDNFMWRHVSGKDGILAKAL-KSRI----NSESNRRKYLCSSSQS 597
+ LVK+ +F R+VS + +LA+ KS + + ++N LC S ++
Sbjct: 518 LDLVKRSLW-SFE-RYVSRLEELLAQLKDKSTVEYKPSVDNNDEDDLCDSCKT 568
Score = 116 (45.9 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 32/109 (29%), Positives = 55/109 (50%)
Query: 137 VLEEAPVFYPTEEEFSDTLKYIASVRLKS--EEYGICRIVPPPSWKPPCLVKENDIWKSS 194
+L PV PT++EF+D + Y++S ++ YG+ +IVPPP+WKP + +
Sbjct: 7 LLTPCPVLTPTDQEFNDPVGYLSSDKVSKLGATYGLVKIVPPPNWKPSFHINPD-----F 61
Query: 195 KFVTQIQQIDGLQNQYFSSKAAKIY-DNVNSNSKRRRSLNTGLQNGVGG 242
KF + Q + L ++++ + +N+N K RR L V G
Sbjct: 62 KFHVRKQVLSDLG---ITTRSRDFFRENINRFLKMRRKRQLKLYFNVQG 107
Score = 40 (19.1 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 127 RWSPEGAKNDVLEEAPVFYPTEEEFSDTLKYIAS 160
+W GA+ V A E E+ T+KY A+
Sbjct: 130 KWEKLGARFGVKASA-----LEREYDSTIKYYAT 158
>UNIPROTKB|E7EV89 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS51184
SMART:SM00558 GO:GO:0005634 GO:GO:0005737 GO:GO:0016706
EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A
IPI:IPI00909864 ProteinModelPortal:E7EV89 SMR:E7EV89 PRIDE:E7EV89
Ensembl:ENST00000544760 ArrayExpress:E7EV89 Bgee:E7EV89
Uniprot:E7EV89
Length = 715
Score = 400 (145.9 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 107/355 (30%), Positives = 175/355 (49%)
Query: 349 CEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCL 408
C+ ++Y SGWNLNN+P+L S+L+ + + VP L+VGMCF+S W +E+H
Sbjct: 49 CKIRPPKEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWS 108
Query: 409 CSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEG 468
S+ Y+H G PK W+ +P A + + ++ P L Q ++ V ++P+ L G
Sbjct: 109 YSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHG 168
Query: 469 VPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKT 528
VPVYR Q GEFV+ F +Y+SGF+ G+N +E+VNF +WLP G+ + YR R
Sbjct: 169 VPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHC 228
Query: 529 SISHDKLL--LGAAREVVKTQWEISLVKK---HTSDNFMWRHVSGKDGILAKALKSRINS 583
SH++L+ + A E + + K+ T + R + G+L +
Sbjct: 229 VFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRESVVQMGVLMSEEEVFELV 288
Query: 584 ESNRRKYLCSSSQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNH---VK 640
+ R+ CS+ ++ + E +CLY H CPC P CL + ++
Sbjct: 289 PDDERQ--CSACRTTCFLSALTCSCNPERLVCLY--H-PTDLCPC-PMQKKCLRYRYPLE 342
Query: 641 QLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRWAKD--DLKMYLHSYSSR 693
L S + K+ Y+ + ++ + EA LSA + KD +L++ L R
Sbjct: 343 DLPSLLYGVKVRAQSYD-TWVSRVTEA----LSANFNHKKDLIELRVMLEDAEDR 392
Score = 102 (41.0 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSW 179
E PVF P+ EEF+D L +I +R +E+ GIC+I PP +
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKEY 57
>UNIPROTKB|F1RUJ7 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:CT841540 EMBL:CT737348 Ensembl:ENSSSCT00000001155
Uniprot:F1RUJ7
Length = 1232
Score = 316 (116.3 bits), Expect = 7.0e-40, Sum P(2) = 7.0e-40
Identities = 125/462 (27%), Positives = 200/462 (43%)
Query: 235 GLQNGVGG-NGCTMNLDE---ARCTEG----FESERGPEFTLETFKKYADDFKEQYFCTK 286
GL NGV NG L E A+ G F E+ E K DF + + +
Sbjct: 753 GLINGVAHRNGFRSKLKEVGPAQLKTGRRRLFAQEKEVAKEEEEDKGILSDFHKCIYKGR 812
Query: 287 NIDMTV----DENPLVFKKQGEPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGF 342
++ +T N + EP+ IE EY R++E + V G+ ++T T GSGF
Sbjct: 813 SVSLTTFYRTARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGF 871
Query: 343 PTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWK 402
P + + + + GWNL LP GS+L + +P L++GM F++ W
Sbjct: 872 PVGKS-------EPFSRHGWNLTVLPNNTGSILRHLGAVP-GVTIPWLNIGMVFSTSCWS 923
Query: 403 VEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYL-----PTLSFKQSKWHNRWVA 457
+++ L + Y+H GA IW+ IP K + L P L +S
Sbjct: 924 RDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQANGTPGLQMLESN------V 977
Query: 458 SLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHG-QN 516
+SP L EGV V+R Q G+FV+ F GS+ S CG++ SE+V+FA +W G +
Sbjct: 978 MISPEVLCREGVKVHRAVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFET 1037
Query: 517 AIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVK-KHTSDNFMWRHVSGKDGILAK 575
A E+ R K S +KLL A+ K + +L D + + +
Sbjct: 1038 AKEMKRRHIAKP-FSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEA 1096
Query: 576 ALKSRINSESNRRKYLCSSSQSQ-RMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIY- 633
L S S+ + + R + TS+R C +C + +LS ++
Sbjct: 1097 GLHSSARYGSHDGGSAAPDGKKKPRKWLQLE-TSERRCQVCQHLCYLSMVVQENENVVFC 1155
Query: 634 -SC-LNHVKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLS 673
C L HV++ SC + ++RY+ ++ L+ + GK+S
Sbjct: 1156 LECALRHVEKQKSCRGLK--LMYRYDEEQIISLVNQICGKVS 1195
Score = 198 (74.8 bits), Expect = 7.0e-40, Sum P(2) = 7.0e-40
Identities = 72/223 (32%), Positives = 103/223 (46%)
Query: 1 MGTKRMRANLGNEDLDKLSAPPGFMSLTSFLLKKVENSEESCNSVAFASASAQEPVCANA 60
+G +++R L N APP + KK++ + + ASAQ P A A
Sbjct: 409 VGGRQLREGLRNSKRRLEEAPPADKPQSP--PKKMKGAAGAAEGPGRKPASAQAPAPAPA 466
Query: 61 PSDMVDA---GTLK-----RSL-RNRPW--ILYEQSDNNQKESNFEQPVEELSSRATLPK 109
P+ A G +K RSL RNRP + Q S + P E S+ + P
Sbjct: 467 PAPAEKAPPGGHVKKEVPERSLERNRPKRAAAGKGPPGRQAHSKPDAPCEHRSTSQSEP- 525
Query: 110 GVIRGCPDCSNCLKVTAR--WSPEGAKNDVLEEAPVFYPTEEEFSDTLKYIASVRLKSEE 167
+ R + K R W+ ++E PV P+ +EF D L YI SVR + E+
Sbjct: 526 -LPRPHEAAAKAEKGAGRAGWA-------AMDEIPVLRPSAKEFHDPLVYIESVRPQVEK 577
Query: 168 YGICRIVPPPSWKPPCLVKENDIWKSSKFVTQIQQIDGLQNQY 210
YG+CR++PPP W+P C K ND +FVTQIQ I L ++
Sbjct: 578 YGMCRVIPPPDWRPEC--KLND---EMRFVTQIQHIHKLGRRW 615
>UNIPROTKB|F1P6D5 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
EMBL:AAEX03017561 EMBL:AAEX03017558 EMBL:AAEX03017559
EMBL:AAEX03017560 Ensembl:ENSCAFT00000015718 Uniprot:F1P6D5
Length = 1249
Score = 322 (118.4 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 128/466 (27%), Positives = 204/466 (43%)
Query: 235 GLQNGVGG-NGCTMNLDE---ARCTEG----FESERGPEFTLETFKKYADDFKEQYFCTK 286
GL NGV NG L E A+ G F E+ E K DF + + +
Sbjct: 762 GLINGVAHRNGFRTKLKEVGPAQLKTGRRRLFAQEKEVAREEEEDKGVLSDFHKCIYKGR 821
Query: 287 NIDMTV----DENPLVFKKQGEPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGF 342
++ +T N + EP+ IE EY R++E + V G+ ++T T GSGF
Sbjct: 822 SVSLTTFYRTARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGF 880
Query: 343 PTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWK 402
P + + + + GWNL LP GS+L + +P L++GM F++ W
Sbjct: 881 PVGKS-------EPFSRHGWNLTVLPNNTGSILRHLGAVP-GVTIPWLNIGMVFSTSCWS 932
Query: 403 VEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYL-----PTLSFKQSKWHNRWVA 457
+++ L + Y+H GA IW+ IP K + L P L +S
Sbjct: 933 RDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQANGTPGLQMLESN------V 986
Query: 458 SLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHG-QN 516
+SP L EG+ V+R Q G+FV+ F GS+ S CG++ SE+V+FA +W G +
Sbjct: 987 MISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFET 1046
Query: 517 AIELYREQGRKTSISHDKLLLGAAREVVK-----TQWEISLVKKHTSDNFM-WRHVSGKD 570
A E+ R K S +KLL A+ K T IS + D + R +
Sbjct: 1047 AKEMKRRHIAKP-FSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEA 1105
Query: 571 GILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSP 630
G+ + A R S + + + R + TS+R C +C + +LS
Sbjct: 1106 GLHSSA---RYGSHDSNGA-MADGKKKPRKWLQLE-TSERRCQVCQHLCYLSMVVQENEN 1160
Query: 631 DIY--SC-LNHVKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLS 673
++ C L HV++ SC + ++RY+ ++ L+ + GK+S
Sbjct: 1161 VVFCLECALRHVEKQKSCRGLK--LMYRYDEEQIISLVNQICGKVS 1204
Score = 178 (67.7 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 35/73 (47%), Positives = 48/73 (65%)
Query: 138 LEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFV 197
++E PV P+ +EF D L YI SVR + E+YG+CR++PPP W+P C K ND +FV
Sbjct: 557 MDEIPVLRPSAKEFHDPLVYIESVRAQVEKYGMCRVIPPPDWRPEC--KLND---EMRFV 611
Query: 198 TQIQQIDGLQNQY 210
TQIQ I L ++
Sbjct: 612 TQIQHIHKLGRRW 624
>UNIPROTKB|J9NWC2 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AAEX03017561
EMBL:AAEX03017558 EMBL:AAEX03017559 EMBL:AAEX03017560
Ensembl:ENSCAFT00000043518 Uniprot:J9NWC2
Length = 1259
Score = 322 (118.4 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 128/466 (27%), Positives = 204/466 (43%)
Query: 235 GLQNGVGG-NGCTMNLDE---ARCTEG----FESERGPEFTLETFKKYADDFKEQYFCTK 286
GL NGV NG L E A+ G F E+ E K DF + + +
Sbjct: 772 GLINGVAHRNGFRTKLKEVGPAQLKTGRRRLFAQEKEVAREEEEDKGVLSDFHKCIYKGR 831
Query: 287 NIDMTV----DENPLVFKKQGEPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGF 342
++ +T N + EP+ IE EY R++E + V G+ ++T T GSGF
Sbjct: 832 SVSLTTFYRTARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGF 890
Query: 343 PTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWK 402
P + + + + GWNL LP GS+L + +P L++GM F++ W
Sbjct: 891 PVGKS-------EPFSRHGWNLTVLPNNTGSILRHLGAVP-GVTIPWLNIGMVFSTSCWS 942
Query: 403 VEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYL-----PTLSFKQSKWHNRWVA 457
+++ L + Y+H GA IW+ IP K + L P L +S
Sbjct: 943 RDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQANGTPGLQMLESN------V 996
Query: 458 SLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHG-QN 516
+SP L EG+ V+R Q G+FV+ F GS+ S CG++ SE+V+FA +W G +
Sbjct: 997 MISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFET 1056
Query: 517 AIELYREQGRKTSISHDKLLLGAAREVVK-----TQWEISLVKKHTSDNFM-WRHVSGKD 570
A E+ R K S +KLL A+ K T IS + D + R +
Sbjct: 1057 AKEMKRRHIAKP-FSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEA 1115
Query: 571 GILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSP 630
G+ + A R S + + + R + TS+R C +C + +LS
Sbjct: 1116 GLHSSA---RYGSHDSNGA-MADGKKKPRKWLQLE-TSERRCQVCQHLCYLSMVVQENEN 1170
Query: 631 DIY--SC-LNHVKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLS 673
++ C L HV++ SC + ++RY+ ++ L+ + GK+S
Sbjct: 1171 VVFCLECALRHVEKQKSCRGLK--LMYRYDEEQIISLVNQICGKVS 1214
Score = 178 (67.7 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 35/73 (47%), Positives = 48/73 (65%)
Query: 138 LEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFV 197
++E PV P+ +EF D L YI SVR + E+YG+CR++PPP W+P C K ND +FV
Sbjct: 567 MDEIPVLRPSAKEFHDPLVYIESVRAQVEKYGMCRVIPPPDWRPEC--KLND---EMRFV 621
Query: 198 TQIQQIDGLQNQY 210
TQIQ I L ++
Sbjct: 622 TQIQHIHKLGRRW 634
>MGI|MGI:104813 [details] [associations]
symbol:Jarid2 "jumonji, AT rich interactive domain 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0001889 "liver development" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA;TAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031061 "negative regulation of histone methylation"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048538 "thymus development" evidence=IMP] [GO:0048863 "stem
cell differentiation" evidence=IMP] [GO:0051574 "positive
regulation of histone H3-K9 methylation" evidence=IDA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 MGI:MGI:104813
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0001889
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0000122
GO:GO:0048536 GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774
EMBL:CH466546 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 CTD:3720
eggNOG:NOG327026 HOGENOM:HOG000013203 HOVERGEN:HBG052160 KO:K11478
OrthoDB:EOG4KKZ26 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:D31967 EMBL:AK045214 EMBL:AK147226 EMBL:AK164134
EMBL:BC003374 EMBL:BC052444 EMBL:BC060695 IPI:IPI00124575
IPI:IPI00955365 PIR:T30254 RefSeq:NP_001191972.1
RefSeq:NP_001191973.1 RefSeq:NP_068678.1 UniGene:Mm.25059 PDB:2RQ5
PDBsum:2RQ5 ProteinModelPortal:Q62315 SMR:Q62315 DIP:DIP-34312N
IntAct:Q62315 MINT:MINT-4792531 STRING:Q62315 PhosphoSite:Q62315
PRIDE:Q62315 Ensembl:ENSMUST00000044608 Ensembl:ENSMUST00000173246
Ensembl:ENSMUST00000173704 GeneID:16468 KEGG:mmu:16468
UCSC:uc007qgr.1 UCSC:uc007qgv.1 InParanoid:Q3TPU4 ChiTaRS:JARID2
EvolutionaryTrace:Q62315 NextBio:289745 Bgee:Q62315
CleanEx:MM_JARID2 Genevestigator:Q62315
GermOnline:ENSMUSG00000038518 Uniprot:Q62315
Length = 1234
Score = 321 (118.1 bits), Expect = 3.2e-38, Sum P(2) = 3.2e-38
Identities = 112/392 (28%), Positives = 179/392 (45%)
Query: 297 LVFKKQGEPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQK 356
+ F K EP+ IE EY R++E + V G+ ++T T GSGFP + +
Sbjct: 833 MCFSK--EPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFPVGKS-------EP 882
Query: 357 YLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHL 416
+ + GWNL LP GS+L + +P L++GM F++ W +++ L + Y+H
Sbjct: 883 FSRHGWNLTVLPNNTGSILRHLGAVP-GVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHT 941
Query: 417 GAPKIWHSIPQRYAVKFDAAAKKYL-----PTLSFKQSKWHNRWVASLSPSPLKSEGVPV 471
GA IW+ IP K + L P L +S +SP L +G+ V
Sbjct: 942 GADCIWYCIPAEEENKLEDVVHTLLQGNGTPGLQMLESN------VMISPEVLCKKGIKV 995
Query: 472 YRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHG-QNAIELYREQGRKTSI 530
+R Q G+FV+ F GS+ S CG+N SE+V+FA +W G + A E+ R K
Sbjct: 996 HRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVHFATTQWTSMGFETAKEMKRRHIAKP-F 1054
Query: 531 SHDKLLLGAAREVVK-----TQWEISLVKKHTSDNFM-WRHVSGKDGILAKALKSRINSE 584
S +KLL A+ K T IS + D + R + + G+ + A R S
Sbjct: 1055 SMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRLLFEAGLHSSA---RYGSH 1111
Query: 585 SNRRKYLCSSSQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIY--SC-LNHVKQ 641
+ + R + TS+R C IC + +LS ++ C L HV++
Sbjct: 1112 DGNST-VADGKKKPRKWLQLE-TSERRCQICQHLCYLSMVVQENENVVFCLECALRHVEK 1169
Query: 642 LCSCAWTEKIFLFRYEISELNVLLEAVEGKLS 673
SC + ++RY+ ++ L+ + GK+S
Sbjct: 1170 QKSCRGLK--LMYRYDEEQIISLVNQICGKVS 1199
Score = 177 (67.4 bits), Expect = 3.2e-38, Sum P(2) = 3.2e-38
Identities = 35/73 (47%), Positives = 48/73 (65%)
Query: 138 LEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFV 197
++E PV P+ +EF D L YI SVR + E+YG+CR++PPP W+P C K ND +FV
Sbjct: 552 MDEIPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPEC--KLND---EMRFV 606
Query: 198 TQIQQIDGLQNQY 210
TQIQ I L ++
Sbjct: 607 TQIQHIHKLGRRW 619
>UNIPROTKB|F1NWZ0 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0031061
"negative regulation of histone methylation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 IPI:IPI00597467 GO:GO:0031061
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AADN02027529
EMBL:AADN02027521 EMBL:AADN02027522 EMBL:AADN02027523
EMBL:AADN02027524 EMBL:AADN02027525 EMBL:AADN02027526
EMBL:AADN02027527 EMBL:AADN02027528 Ensembl:ENSGALT00000020740
Uniprot:F1NWZ0
Length = 1220
Score = 319 (117.4 bits), Expect = 8.3e-38, Sum P(2) = 8.3e-38
Identities = 110/385 (28%), Positives = 176/385 (45%)
Query: 304 EPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWN 363
EP++ +E EY R++E + V G+ ++T T GSGFP + + + + GWN
Sbjct: 816 EPTVAEVEQEYWRLVEQKDSHVAVHCGK-VDTNTHGSGFPVGKS-------EPFSRHGWN 867
Query: 364 LNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWH 423
L LP GS+L + +P L++GM F++ W +++ L + Y+H GA IW+
Sbjct: 868 LTVLPNNTGSILRHLGAVP-GVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 926
Query: 424 SIPQRYAVKFDAAAKKYL-----PTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSP 478
IP K D L P L +S +SP L EG+ V+R Q
Sbjct: 927 CIPAAEENKLDDVVHTLLQANGTPGLEMLESN------VMISPEILCKEGIRVHRTVQQS 980
Query: 479 GEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHG-QNAIELYREQGRKTSISHDKLLL 537
G+FV+ F GS+ S CG++ SE+V+FA +W G + A E+ R + K S +KLL
Sbjct: 981 GQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFKTAKEMKRRRIAKP-FSMEKLLY 1039
Query: 538 GAAREVVK-----TQWEISLVKKHTSDNFM-WRHVSGKDGILAKALKSRINSESNRRKYL 591
A K T IS + D + R + G+ + A +S S
Sbjct: 1040 QIATAEAKKENGPTLSTISSLLGELRDTELRQRRQLYEAGLHSSARYGSHDSSSTAM--- 1096
Query: 592 CSSSQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIY--SC-LNHVKQLCSCAWT 648
+ R + TS+R C IC + +LS ++ C L HV++ SC
Sbjct: 1097 -DGKKKPRKWLQLE-TSERRCQICQHLCYLSMVVQENENVVFCLECALRHVEKQKSCRGL 1154
Query: 649 EKIFLFRYEISELNVLLEAVEGKLS 673
+ ++RY+ ++ L+ + GK+S
Sbjct: 1155 K--MMYRYDEEQIISLVNQICGKVS 1177
Score = 175 (66.7 bits), Expect = 8.3e-38, Sum P(2) = 8.3e-38
Identities = 35/74 (47%), Positives = 48/74 (64%)
Query: 137 VLEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKF 196
+L E P+ P+ +EF D L YI SVR + E+YG+CR++PPP W+P C K ND +F
Sbjct: 529 MLGEIPILRPSTKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPEC--KLND---EMRF 583
Query: 197 VTQIQQIDGLQNQY 210
VTQIQ I L ++
Sbjct: 584 VTQIQHIHKLGRRW 597
>UNIPROTKB|Q5F363 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0051574 "positive regulation of histone
H3-K9 methylation" evidence=ISS] [GO:0031061 "negative regulation
of histone methylation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AJ851787
IPI:IPI00597467 RefSeq:NP_001012880.1 UniGene:Gga.12117
ProteinModelPortal:Q5F363 STRING:Q5F363 GeneID:420839
KEGG:gga:420839 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 InParanoid:Q5F363 KO:K11478 OrthoDB:EOG4KKZ26
NextBio:20823696 GO:GO:0031061 Uniprot:Q5F363
Length = 1233
Score = 319 (117.4 bits), Expect = 8.5e-38, Sum P(2) = 8.5e-38
Identities = 110/385 (28%), Positives = 176/385 (45%)
Query: 304 EPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWN 363
EP++ +E EY R++E + V G+ ++T T GSGFP + + + + GWN
Sbjct: 829 EPTVAEVEQEYWRLVEQKDSHVAVHCGK-VDTNTHGSGFPVGKS-------EPFSRHGWN 880
Query: 364 LNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWH 423
L LP GS+L + +P L++GM F++ W +++ L + Y+H GA IW+
Sbjct: 881 LTVLPNNTGSILRHLGAVP-GVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWY 939
Query: 424 SIPQRYAVKFDAAAKKYL-----PTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSP 478
IP K D L P L +S +SP L EG+ V+R Q
Sbjct: 940 CIPAAEENKLDDVVHTLLQANGTPGLEMLESN------VMISPEILCKEGIRVHRTVQQS 993
Query: 479 GEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHG-QNAIELYREQGRKTSISHDKLLL 537
G+FV+ F GS+ S CG++ SE+V+FA +W G + A E+ R + K S +KLL
Sbjct: 994 GQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFKTAKEMKRRRIAKP-FSMEKLLY 1052
Query: 538 GAAREVVK-----TQWEISLVKKHTSDNFM-WRHVSGKDGILAKALKSRINSESNRRKYL 591
A K T IS + D + R + G+ + A +S S
Sbjct: 1053 QIATAEAKKENGPTLSTISSLLGELRDTELRQRRQLYEAGLHSSARYGSHDSSSTAM--- 1109
Query: 592 CSSSQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIY--SC-LNHVKQLCSCAWT 648
+ R + TS+R C IC + +LS ++ C L HV++ SC
Sbjct: 1110 -DGKKKPRKWLQLE-TSERRCQICQHLCYLSMVVQENENVVFCLECALRHVEKQKSCRGL 1167
Query: 649 EKIFLFRYEISELNVLLEAVEGKLS 673
+ ++RY+ ++ L+ + GK+S
Sbjct: 1168 K--MMYRYDEEQIISLVNQICGKVS 1190
Score = 175 (66.7 bits), Expect = 8.5e-38, Sum P(2) = 8.5e-38
Identities = 35/74 (47%), Positives = 48/74 (64%)
Query: 137 VLEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKF 196
+L E P+ P+ +EF D L YI SVR + E+YG+CR++PPP W+P C K ND +F
Sbjct: 542 MLGEIPILRPSTKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPEC--KLND---EMRF 596
Query: 197 VTQIQQIDGLQNQY 210
VTQIQ I L ++
Sbjct: 597 VTQIQHIHKLGRRW 610
>UNIPROTKB|F1MH56 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:DAAA02055659 EMBL:DAAA02055660 EMBL:DAAA02055661
EMBL:DAAA02055662 IPI:IPI00689067 ProteinModelPortal:F1MH56
Ensembl:ENSBTAT00000017189 NextBio:20874777 Uniprot:F1MH56
Length = 1248
Score = 315 (115.9 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 124/462 (26%), Positives = 200/462 (43%)
Query: 235 GLQNGVGG-NGCTMNLDE---ARCTEG----FESERGPEFTLETFKKYADDFKEQYFCTK 286
GL NGV NG L E A+ G F E+ E K DF + + +
Sbjct: 771 GLINGVAHRNGFRSKLKEVGPAQLKTGRRRLFAQEKEVVKEEEEDKGILSDFHKCIYKGR 830
Query: 287 NIDMTV----DENPLVFKKQGEPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGF 342
++ +T N + EP+ IE EY R++E + V G+ ++T T GSGF
Sbjct: 831 SVSLTTFYRTARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGF 889
Query: 343 PTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWK 402
P + + + + GWNL LP GS+L + +P L++GM F++ W
Sbjct: 890 PVGKS-------EPFSRHGWNLTVLPNNTGSILRHLGAVP-GVTIPWLNIGMVFSTSCWS 941
Query: 403 VEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYL-----PTLSFKQSKWHNRWVA 457
+++ L + Y+H GA IW+ IP K + L P L +S
Sbjct: 942 RDQNHLPYIDYLHTGADCIWYCIPAEEEHKLEDVVHTLLQANGTPGLQMLESN------V 995
Query: 458 SLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHG-QN 516
+SP L EG+ V+R Q G+FV+ F GS+ S CG++ SE+V+FA +W G +
Sbjct: 996 MISPEVLCREGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFET 1055
Query: 517 AIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVK-KHTSDNFMWRHVSGKDGILAK 575
A E+ R K S +KLL A+ K + +L D + + +
Sbjct: 1056 AKEMKRRHIAKP-FSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEA 1114
Query: 576 ALKSRINSESNRRKYLCSSSQSQ-RMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIY- 633
L S S+ + + R + TS+R C +C + +LS ++
Sbjct: 1115 GLHSSARYGSHDGSSAAPDGKKKPRKWLQLE-TSERRCQVCQHLCYLSMVVQENENVVFC 1173
Query: 634 -SC-LNHVKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLS 673
C L HV++ SC + ++RY+ ++ L+ + GK+S
Sbjct: 1174 LECALRHVEKQKSCRGLK--LMYRYDEEQIISLVNQICGKVS 1213
Score = 176 (67.0 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 35/73 (47%), Positives = 48/73 (65%)
Query: 138 LEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFV 197
++E PV P+ +EF D L YI SVR + E+YG+CR++PPP W+P C K ND +FV
Sbjct: 566 MDEIPVLRPSAKEFHDPLVYIESVRPQVEKYGMCRVIPPPDWRPEC--KLND---EMRFV 620
Query: 198 TQIQQIDGLQNQY 210
TQIQ I L ++
Sbjct: 621 TQIQHIHKLGRRW 633
>UNIPROTKB|Q92833 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=TAS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0045892 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0007417 GO:GO:0001889 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 GO:GO:0048536 GO:GO:0048538
EMBL:CH471087 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:U57592 EMBL:AK292861 EMBL:AK299349 EMBL:AK303610 EMBL:AL136162
EMBL:AL021938 EMBL:BC046184 EMBL:BC046246 IPI:IPI00023756
IPI:IPI00871836 IPI:IPI00955447 RefSeq:NP_001253969.1
RefSeq:NP_004964.2 UniGene:Hs.269059 ProteinModelPortal:Q92833
SMR:Q92833 DIP:DIP-45494N IntAct:Q92833 STRING:Q92833
PhosphoSite:Q92833 DMDM:61252601 PaxDb:Q92833 PRIDE:Q92833
Ensembl:ENST00000341776 Ensembl:ENST00000397311 GeneID:3720
KEGG:hsa:3720 UCSC:uc003nbj.3 GeneCards:GC06P015246 HGNC:HGNC:6196
HPA:HPA044909 MIM:601594 neXtProt:NX_Q92833 PharmGKB:PA29995
InParanoid:Q92833 OMA:QRLACIK GenomeRNAi:3720 NextBio:14577
ArrayExpress:Q92833 Bgee:Q92833 CleanEx:HS_JARID2
Genevestigator:Q92833 GermOnline:ENSG00000008083 Uniprot:Q92833
Length = 1246
Score = 317 (116.6 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 128/466 (27%), Positives = 204/466 (43%)
Query: 235 GLQNGVGG-NGCTMNLDE---ARCTEG----FESERGPEFTLETFKKYADDFKEQYFCTK 286
GL +GV NG L E A+ G F E+ E K +DF + + +
Sbjct: 759 GLIHGVAPRNGFRSKLKEVGQAQLKTGRRRLFAQEKEVVKEEEEDKGVLNDFHKCIYKGR 818
Query: 287 NIDMTV----DENPLVFKKQGEPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGF 342
++ +T N + EP+ IE EY R++E + V G+ ++T T GSGF
Sbjct: 819 SVSLTTFYRTARNIMSMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGF 877
Query: 343 PTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWK 402
P + + + + GWNL LP GS+L + +P L++GM F++ W
Sbjct: 878 PVGKS-------EPFSRHGWNLTVLPNNTGSILRHLGAVP-GVTIPWLNIGMVFSTSCWS 929
Query: 403 VEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYL-----PTLSFKQSKWHNRWVA 457
+++ L + Y+H GA IW+ IP K + L P L +S
Sbjct: 930 RDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQANGTPGLQMLESN------V 983
Query: 458 SLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHG-QN 516
+SP L EG+ V+R Q G+FV+ F GS+ S CG++ SE+V+FA +W G +
Sbjct: 984 MISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFET 1043
Query: 517 AIELYREQGRKTSISHDKLLLGAAREVVK-----TQWEISLVKKHTSDNFM-WRHVSGKD 570
A E+ R K S +KLL A+ K T IS + D + R +
Sbjct: 1044 AKEMKRRHIAKP-FSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEA 1102
Query: 571 GILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSP 630
G+ + A R S + + R + TS+R C IC + +LS
Sbjct: 1103 GLHSSA---RYGSHDGSST-VADGKKKPRKWLQLE-TSERRCQICQHLCYLSMVVQENEN 1157
Query: 631 DIY--SC-LNHVKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLS 673
++ C L HV++ SC + ++RY+ ++ L+ + GK+S
Sbjct: 1158 VVFCLECALRHVEKQKSCRGLK--LMYRYDEEQIISLVNQICGKVS 1201
Score = 173 (66.0 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 138 LEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFV 197
++E PV P+ +EF D L YI SVR + E++G+CR++PPP W+P C K ND +FV
Sbjct: 554 MDEIPVLRPSAKEFHDPLIYIESVRAQVEKFGMCRVIPPPDWRPEC--KLND---EMRFV 608
Query: 198 TQIQQIDGLQNQY 210
TQIQ I L ++
Sbjct: 609 TQIQHIHKLGRRW 621
>ZFIN|ZDB-GENE-060503-246 [details] [associations]
symbol:jarid2b "jumonji, AT rich interactive domain
2b" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0035097 "histone methyltransferase
complex" evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0048863 "stem cell differentiation"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00558 ZFIN:ZDB-GENE-060503-246
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:BX842609 EMBL:BX890540 IPI:IPI00500491 RefSeq:NP_001189388.1
UniGene:Dr.108454 Ensembl:ENSDART00000147627 GeneID:558456
KEGG:dre:558456 CTD:558456 GeneTree:ENSGT00530000063118
InParanoid:Q1LVC2 OMA:CDESEIS NextBio:20882479 Bgee:Q1LVC2
Uniprot:Q1LVC2
Length = 1319
Score = 333 (122.3 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
Identities = 111/421 (26%), Positives = 197/421 (46%)
Query: 269 ETFKKYADD--FKEQYFCT---KNIDMT----VDENPLVFKKQGEPSLENIEGEYRRIIE 319
ET ++ D+ +Q+ C +++ +T + N ++ EP +E +Y RI+E
Sbjct: 866 ETEEEMEDEGVLSDQHKCIYKGRSVSLTTFYRIARNTMMMYFNKEPGAAEVEQDYWRIVE 925
Query: 320 NPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSES 379
+ V YG+ ++T T GSGFP + + + K GWNL LP GS+L
Sbjct: 926 QRDCHVAVHYGK-VDTNTHGSGFPVGKS-------EPFSKHGWNLTVLPNNSGSILRHLG 977
Query: 380 CKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKK 439
+ +P L++GM F++ W +++ L + Y+H GA IW+SIP K D
Sbjct: 978 AVP-GVTIPWLNIGMVFSTSCWSQDQNRLPYIDYLHTGADCIWYSIPAEEKTKLDKVVHT 1036
Query: 440 YLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNC 499
L + + V +SP L EG+ V+R Q G+FV+VF G++ S CG++
Sbjct: 1037 LLQANGTPGLEMLEKNVM-ISPEVLCREGIKVHRTVQQSGQFVVVFPGAFVSRVCCGYSV 1095
Query: 500 SESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEI------SLV 553
SE+V+FA +W+ G A + + + S +KLL A K + + SL+
Sbjct: 1096 SETVHFATPQWMNLGYEAAKDLKCRRIAKPFSMEKLLYQIATAEAKRENRLVLSTISSLL 1155
Query: 554 KKHTSDNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRMDKNFDYTSKRECN 613
K + R + G+L+ A R + + + + + R + +S+R C
Sbjct: 1156 KDLRNIEMKQRQELYEAGLLSSA---RYCTHDHNQSP-ADTRKKPRKWLALE-SSERRCQ 1210
Query: 614 ICLYDLHLSAAFCPCSPDIY--SC-LNHVKQLCSCAWTEKIFLFRYEISELNVLLEAVEG 670
+C + +LS ++ C L++V++ +C + ++RY+ ++N L+ V G
Sbjct: 1211 MCQHLCYLSMVVQENENVVFCLECALHYVEKHKNCRGLK--MMYRYDEEQINSLVNQVCG 1268
Query: 671 K 671
K
Sbjct: 1269 K 1269
Score = 153 (58.9 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
Identities = 31/78 (39%), Positives = 46/78 (58%)
Query: 133 AKNDVLEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWK 192
A+ L + P+F P+ EF D L Y+ S R + E G+CR++PP W+P C K ND
Sbjct: 599 ARYAALGDVPIFKPSSREFQDPLVYLDSFREQVESCGLCRVLPPTDWRPEC--KLND--- 653
Query: 193 SSKFVTQIQQIDGLQNQY 210
+FVTQ+Q+I L ++
Sbjct: 654 EMRFVTQVQRIHKLGRRW 671
>ZFIN|ZDB-GENE-061218-1 [details] [associations]
symbol:jarid2a "jumonji, AT rich interactive domain
2a" species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-061218-1 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
EMBL:CR391941 IPI:IPI00799170 Ensembl:ENSDART00000086333
Bgee:E7F6J7 Uniprot:E7F6J7
Length = 1171
Score = 314 (115.6 bits), Expect = 3.6e-34, Sum P(2) = 3.6e-34
Identities = 101/382 (26%), Positives = 174/382 (45%)
Query: 297 LVFKKQGEPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQK 356
+ F K EP +E EY R+++ + V G ++T T GSGFP + +
Sbjct: 772 MCFSK--EPDTAEVEKEYWRLVDEKESHVAVHCGR-VDTKTHGSGFPVGKS-------EP 821
Query: 357 YLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHL 416
+ K GWNLN L GS+L + +P L++GM F++ W +++ L + Y+H
Sbjct: 822 FSKHGWNLNVLSNNSGSILRHLGAVP-GVTIPWLNIGMVFSTSCWCRDQNSLPYIDYLHT 880
Query: 417 GAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQ 476
GA IW+ IP K D L + R + +SP L+ +GV VYR Q
Sbjct: 881 GADCIWYCIPAEEKSKLDKVVHTLLQANGTPGLEMLERNIM-ISPEVLRRKGVKVYRTVQ 939
Query: 477 SPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLL 536
G+F++ F G++ + CG++ SE+++FA ++W+ G A + + + + S +KLL
Sbjct: 940 HSGQFMVCFPGTFVAKVCCGYSVSETMHFANLQWMKLGYEAAKDLKRRRIEEPFSTEKLL 999
Query: 537 LGAA---REVVKTQWEISLVKKHTSD-NFMWRHVSGKDGI-LAKALKSRINSESNRRKYL 591
R+ + +S + + D R + G+ L+ + S + RRK
Sbjct: 1000 YQITTCERDNKQLMTAVSSLFRDLRDAEIRQRRELFEAGLRLSARYGTNCESPTERRK-- 1057
Query: 592 CSSSQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNHVKQLCSCAWTEK- 650
Q R ++ T+ R C +C + +LS S ++ CL + + +
Sbjct: 1058 ---QQRSRFTED---TADRRCQVCQHLCYLSMVVHE-SDNVVFCLECALRYIQKRRSPRG 1110
Query: 651 -IFLFRYEISELNVLLEAVEGK 671
+FRY +LN L+ V G+
Sbjct: 1111 LKMMFRYSEEQLNSLVNRVCGR 1132
Score = 145 (56.1 bits), Expect = 3.6e-34, Sum P(2) = 3.6e-34
Identities = 38/116 (32%), Positives = 59/116 (50%)
Query: 105 ATLPKGVIRGCPDCSNCLK------VTARWSPE----GAKNDVLEEAPVFYPTEEEFSDT 154
A PK + P SN LK +T +S E G ++ + E PVFYP EF D
Sbjct: 458 ANSPK--LSETPRTSNALKQGHPSNMTEPFSSEPKERGRRSAEITELPVFYPNTHEFHDP 515
Query: 155 LKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQIQQIDGLQNQY 210
L ++ R ++E +G+ R+VPP W+P C +KE +FV+ +Q + L ++
Sbjct: 516 LTFMELARGQAEAFGLFRVVPPAGWRPECKLKEE-----MRFVSYVQHVHKLGRRW 566
>FB|FBgn0036004 [details] [associations]
symbol:Jarid2 "Jumonji, AT rich interactive domain 2"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005719
"nuclear euchromatin" evidence=IDA] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0061085 "regulation of histone H3-K27
methylation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR017956 Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00384 SMART:SM00558 EMBL:AE014296
GO:GO:0003677 GO:GO:0035098 GO:GO:0005719 GO:GO:0005700
Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:Q24573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0061085 CTD:3720
KO:K11478 GeneTree:ENSGT00530000063118 FlyBase:FBgn0036004
RefSeq:NP_648324.1 UniGene:Dm.29618 ProteinModelPortal:Q9VT00
SMR:Q9VT00 MINT:MINT-1562739 STRING:Q9VT00
EnsemblMetazoa:FBtr0076468 GeneID:39103 KEGG:dme:Dmel_CG3654
UCSC:CG3654-RD InParanoid:Q9VT00 OMA:HESCEPA PhylomeDB:Q9VT00
GenomeRNAi:39103 NextBio:811931 ArrayExpress:Q9VT00 Bgee:Q9VT00
Uniprot:Q9VT00
Length = 2351
Score = 322 (118.4 bits), Expect = 4.5e-33, Sum P(2) = 4.5e-33
Identities = 114/463 (24%), Positives = 195/463 (42%)
Query: 217 KIYDNVNSN-SKRRRSLNTGLQNGVGGNGCTMNLDEARCTEGFESERGPE-FTLETFKKY 274
K++D V ++ +KR V + D+ E ESE + ++E K
Sbjct: 1902 KLFDEVEADWAKREARARRNADRFVNTESVSNEEDDLSSDEDEESEEEIDGVSMECIVKG 1961
Query: 275 ADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRRIIENPTEEIEVLYGENLE 334
Q++ M L FK +P++ +E E+ R + + V G +++
Sbjct: 1962 RSMPLSQFYRIARNTMA-----LWFKST-DPTVNEVEAEFWRHVAVRDSHVCVHSG-SID 2014
Query: 335 TGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGM 394
+ +G GFP+ P Y + WNL L GS+L S + VP LHVGM
Sbjct: 2015 SSGWGYGFPS---PGPKGKGSNYARHPWNLKVLTNNSGSVLRSLG-PVMGVTVPTLHVGM 2070
Query: 395 CFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNR 454
F++ W + H L + Y+H GA K+W+ IP + F AA +PT ++ W
Sbjct: 2071 LFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPC 2130
Query: 455 WVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHG 514
+ P L GV + R Q PGEF++VF +Y S G+ SESV FA + WL
Sbjct: 2131 DTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLA 2190
Query: 515 QNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKKHTSDNFMWRHVSGKDGILA 574
++ E S ++LL + + + +D V K+
Sbjct: 2191 KDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSEALHQMLPMLND------VCEKESAAR 2244
Query: 575 KALKSRINSESNRRKYLCSSSQSQRMDKNFDYTS-KRECNICLYDLHLSAAFCPCSPDIY 633
+ L++ ++ K Q + + Y S + EC++C +L++S +IY
Sbjct: 2245 EQLRAA--GVTSTEKVQAEKGQKAKKQQQPPYKSIESECDLCRANLYISMVRTE-DGNIY 2301
Query: 634 SCLNH-VKQLCSCAWTEKI--FLFRYEISELNVLLEAVEGKLS 673
CL H +K L + K ++ Y + ++ L+ ++ K++
Sbjct: 2302 -CLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRQLQEKIN 2343
Score = 134 (52.2 bits), Expect = 4.5e-33, Sum P(2) = 4.5e-33
Identities = 21/48 (43%), Positives = 35/48 (72%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKE 187
EAP+F PTE+EF+D +++I + + +GIC+I+PP S+KP C + +
Sbjct: 1740 EAPIFRPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISD 1787
>SGD|S000003880 [details] [associations]
symbol:JHD2 "JmjC domain family histone demethylase specific
for H3-K4" species:4932 "Saccharomyces cerevisiae" [GO:0032453
"histone demethylase activity (H3-K4 specific)" evidence=IDA;IMP]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016577 "histone demethylation" evidence=IDA;IMP] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 SGD:S000003880
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0046872
GO:GO:0008270 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
EMBL:Z49619 EMBL:Z49620 PIR:S57142 RefSeq:NP_012653.1
ProteinModelPortal:P47156 SMR:P47156 DIP:DIP-4835N IntAct:P47156
MINT:MINT-537060 STRING:P47156 PaxDb:P47156 EnsemblFungi:YJR119C
GeneID:853583 KEGG:sce:YJR119C CYGD:YJR119c HOGENOM:HOG000113131
OMA:RNISGMT OrthoDB:EOG44N21B NextBio:974376 Genevestigator:P47156
GermOnline:YJR119C GO:GO:0032453 Uniprot:P47156
Length = 728
Score = 320 (117.7 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 75/229 (32%), Positives = 116/229 (50%)
Query: 306 SLENIEGEYRRII-ENPTEEIE-VLYGENLETGTFG--SGFPTVS------NPCEASDHQ 355
S++ +E + ++ +N + V YG ++ G +GFPT N E D+
Sbjct: 321 SIDELEEMFWSLVTKNRRSSLTTVKYGADIHNELPGQITGFPTREFIPKNINGDELIDYL 380
Query: 356 KYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMH 415
KY NL NLPM SLL + +P +++G F++ W +E+ S Y H
Sbjct: 381 KYCDHPMNLTNLPMAHNSLLPLFKRNISGMTIPWIYIGSLFSTFCWHMEDQYTLSANYQH 440
Query: 416 LGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSP-SP-LKSEGVPVYR 473
G PK+W+SIP+ KF+ P L KQ ++ V +SP P K G+PVY+
Sbjct: 441 EGDPKVWYSIPESGCTKFNDLLNDMSPDLFIKQPDLLHQLVTLISPYDPNFKKSGIPVYK 500
Query: 474 CTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYR 522
Q P E+++ F Y++GF+ G+N +E+VNF WLP+G AI Y+
Sbjct: 501 AVQKPNEYIITFPKCYHAGFNTGYNFNEAVNFTIDFWLPYGFGAITDYK 549
Score = 110 (43.8 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 138 LEEAPVFYPTEEEFSDTLKYIASVRLK--SEEYGICRIVPPPSWKPPCLVKENDIWKSSK 195
+EE P YPTE+EF + + Y+++ +K YG+ ++VPP + PP + D+ ++
Sbjct: 1 MEEIPALYPTEQEFKNPIDYLSNPHIKRLGVRYGMVKVVPPNGFCPPLSI---DM-ENFT 56
Query: 196 FVTQIQQIDGL 206
F +IQ ++ L
Sbjct: 57 FQPRIQNLENL 67
>TAIR|locus:2146653 [details] [associations]
symbol:ELF6 "EARLY FLOWERING 6" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0048577 "negative regulation
of short-day photoperiodism, flowering" evidence=IMP] [GO:0048579
"negative regulation of long-day photoperiodism, flowering"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IMP]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0009630
"gravitropism" evidence=RCA] [GO:0019344 "cysteine biosynthetic
process" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR003347
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51184
SMART:SM00355 SMART:SM00558 GO:GO:0005634 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0003676 GO:GO:0009826 GO:GO:0016702 eggNOG:COG5048
Gene3D:3.30.160.60 GO:GO:0048577 GO:GO:0033169 GO:GO:0009741
EMBL:AL391716 GO:GO:0048579 InterPro:IPR003349 PROSITE:PS51183
EMBL:AY664500 EMBL:AK222064 IPI:IPI00540726 RefSeq:NP_196044.2
UniGene:At.10092 UniGene:At.72547 HSSP:P08151
ProteinModelPortal:Q6BDA0 SMR:Q6BDA0 DIP:DIP-46102N IntAct:Q6BDA0
PRIDE:Q6BDA0 EnsemblPlants:AT5G04240.1 GeneID:830303
KEGG:ath:AT5G04240 TAIR:At5g04240 HOGENOM:HOG000239739
InParanoid:Q6BDA0 OMA:CGEAANF PhylomeDB:Q6BDA0
ProtClustDB:CLSN2681632 ArrayExpress:Q6BDA0 Genevestigator:Q6BDA0
Pfam:PF02375 SMART:SM00545 Uniprot:Q6BDA0
Length = 1340
Score = 276 (102.2 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 60/184 (32%), Positives = 91/184 (49%)
Query: 356 KYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMH 415
K S WNL + PGS+ + P +++GM F+ W VE+H L S+ Y+H
Sbjct: 259 KLSNSSWNLQMIARSPGSVTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNYLH 318
Query: 416 LGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRW---VASLSPSPLKSEGVPVY 472
G+PK W+++P YA+ F+ +K + Q + +SP + + G+P
Sbjct: 319 TGSPKTWYAVPCDYALDFEEVIRKNSYGRNIDQLAALTQLGEKTTLVSPEMIVASGIPCC 378
Query: 473 RCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISH 532
R Q+PGEFV+ F SY+ GF GFNC E+ NF +WL + A +SH
Sbjct: 379 RLVQNPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWLNVAKEAAVRRAAMNYLPMLSH 438
Query: 533 DKLL 536
+LL
Sbjct: 439 QQLL 442
Score = 118 (46.6 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 34/133 (25%), Positives = 65/133 (48%)
Query: 141 APVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPP---PSWKPPCLVKENDIWKSSKFV 197
APVF PT+ EF+D + YI+ + ++ +GIC+I+PP PS K + K + V
Sbjct: 16 APVFRPTDTEFADPIAYISKIEKEASAFGICKIIPPLPKPSKKYVFYNLNKSLLKCPELV 75
Query: 198 TQ--IQQIDGLQNQYFSSKAAKIYDNVNSNSKRRRSLNTGLQNGV-----GGNGCTMNLD 250
+ I ++ F+++ ++ V N K + + ++GV G T++
Sbjct: 76 SDVDISKVCKEDRAVFTTRQQELGQTVKKN-KGEKGKSNSQRSGVKQVWQSGGVYTLDQF 134
Query: 251 EARCTEGFESERG 263
EA+ ++++ G
Sbjct: 135 EAKSKAFYKTQLG 147
>UNIPROTKB|Q6B0I6 [details] [associations]
symbol:KDM4D "Lysine-specific demethylase 4D" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 EMBL:CH471065 GO:GO:0046872
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 PDB:4HON PDBsum:4HON eggNOG:NOG317950
OMA:FASKRWI HOGENOM:HOG000231125 KO:K06709 EMBL:AK001113
EMBL:AK056162 EMBL:AP002383 EMBL:BC074739 EMBL:BC119010
EMBL:BC122858 EMBL:AL137545 IPI:IPI00017991 PIR:T46388
RefSeq:NP_060509.2 UniGene:Hs.503598 PDB:3DXT PDB:3DXU PDB:4HOO
PDBsum:3DXT PDBsum:3DXU PDBsum:4HOO ProteinModelPortal:Q6B0I6
SMR:Q6B0I6 DIP:DIP-29606N IntAct:Q6B0I6 STRING:Q6B0I6
PhosphoSite:Q6B0I6 DMDM:239938885 PRIDE:Q6B0I6
Ensembl:ENST00000335080 Ensembl:ENST00000536741
Ensembl:ENST00000570915 Ensembl:ENST00000576429 GeneID:55693
KEGG:hsa:55693 UCSC:uc001pfe.3 CTD:55693 GeneCards:GC11P094706
HGNC:HGNC:25498 MIM:609766 neXtProt:NX_Q6B0I6 PharmGKB:PA164721552
InParanoid:Q6B0I6 OrthoDB:EOG4F7NJR PhylomeDB:Q6B0I6
ChEMBL:CHEMBL6138 EvolutionaryTrace:Q6B0I6 GenomeRNAi:55693
NextBio:60511 Bgee:Q6B0I6 CleanEx:HS_JMJD2D Genevestigator:Q6B0I6
GermOnline:ENSG00000186280 Uniprot:Q6B0I6
Length = 523
Score = 276 (102.2 bits), Expect = 7.9e-27, Sum P(2) = 7.9e-27
Identities = 59/169 (34%), Positives = 91/169 (53%)
Query: 362 WNLNNLPMLPGSLLSSESCKTC--NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAP 419
WNL +L + LL E C + P L+ GM T+ W E+ L S+ Y+HLG P
Sbjct: 152 WNLGHLGTIQ-DLLEKE-CGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEP 209
Query: 420 KIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPG 479
K W+ +P + + + A++ P S + VA +SP+ LK G+P R TQ G
Sbjct: 210 KTWYVVPPEHGQRLERLARELFPGSSRGCGAFLRHKVALISPTVLKENGIPFNRITQEAG 269
Query: 480 EFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKT 528
EF++ F Y++GF+ GFNC+E++NFA W+ +G+ A + + R T
Sbjct: 270 EFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGEARVT 318
Score = 101 (40.6 bits), Expect = 7.9e-27, Sum P(2) = 7.9e-27
Identities = 30/94 (31%), Positives = 46/94 (48%)
Query: 143 VFYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKEN-DIWKSSKFVTQI 200
+F+PT+EEF+D KYIA + + + G+ +I+PP WK +E D T +
Sbjct: 20 IFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWK----ARETYDNISEILIATPL 75
Query: 201 QQID----GLQNQYFSSKAAKIYDNVN--SNSKR 228
QQ+ G+ QY K A +NSK+
Sbjct: 76 QQVASGRAGVFTQYHKKKKAMTVGEYRHLANSKK 109
>UNIPROTKB|E1C6D5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
EMBL:AADN02012723 EMBL:AADN02012724 IPI:IPI00586868
Ensembl:ENSGALT00000016376 Uniprot:E1C6D5
Length = 1017
Score = 292 (107.8 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 65/197 (32%), Positives = 107/197 (54%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
E++E Y +NL TF + P + + K++ + WN+ L + ++ +ES T
Sbjct: 115 EDLERKYWKNL---TFNA--PIYGADVNGTLYDKHVDA-WNIGRLNTIL-DVVENESGIT 167
Query: 383 CN-LLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYL 441
+ P L+ GM TS W E+ L S+ Y+H G PK W+SIP + + + AK +
Sbjct: 168 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFF 227
Query: 442 PTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSE 501
P + + + +SPS LK G+P + TQ GEF++ F SY++GF+ GFNC+E
Sbjct: 228 PGSAQSCEAFLRHKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAE 287
Query: 502 SVNFAPIEWLPHGQNAI 518
S NFA + W+ +G+ ++
Sbjct: 288 STNFATLRWIEYGKQSV 304
Score = 94 (38.1 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKP-PCLVKENDIWKSSKFVTQIQ 201
F PT E+F D +YIA V + + G+ +IVPP WKP C +++ + +
Sbjct: 17 FRPTMEQFRDFSRYIAYVEAQGAHRAGLAKIVPPKEWKPRKCYDDIDELVIPAPIQQVVT 76
Query: 202 QIDGLQNQYFSSKAA 216
GL QY K A
Sbjct: 77 GQSGLFTQYNIQKKA 91
>UNIPROTKB|E1BPL5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:DAAA02009042 IPI:IPI00690786 RefSeq:NP_001193245.1
UniGene:Bt.58925 Ensembl:ENSBTAT00000002687 GeneID:512622
KEGG:bta:512622 NextBio:20870473 Uniprot:E1BPL5
Length = 1066
Score = 284 (105.0 bits), Expect = 4.5e-26, Sum P(2) = 4.5e-26
Identities = 65/197 (32%), Positives = 102/197 (51%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
EE+E Y +NL TF P + ++K++ WN+ L + L+ ES T
Sbjct: 115 EELERKYWKNL---TFNP--PIYGADVNGTLYEKHVDE-WNIGRLRTIL-DLVEKESGIT 167
Query: 383 CN-LLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYL 441
+ P L+ GM TS W E+ L S+ Y+H G PK W+S+P + + + AK +
Sbjct: 168 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFF 227
Query: 442 PTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSE 501
P + + + +SP LK G+P + TQ GEF++ F Y++GF+ GFNC+E
Sbjct: 228 PGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAE 287
Query: 502 SVNFAPIEWLPHGQNAI 518
S NFA W+ +G+ A+
Sbjct: 288 STNFATRRWIEYGKQAV 304
Score = 98 (39.6 bits), Expect = 4.5e-26, Sum P(2) = 4.5e-26
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKE-NDIWKSSKFVTQIQ 201
FYPT EEF + +YIA + + + G+ ++VPP WKP + +D+ + +
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDDLVIPAPIQQLVT 76
Query: 202 QIDGLQNQYFSSKAA 216
GL QY K A
Sbjct: 77 GQSGLFTQYNIQKKA 91
>UNIPROTKB|O75164 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IDA] [GO:0016577 "histone demethylation" evidence=IDA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070544 "histone
H3-K36 demethylation" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0019048 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0051864 PDB:2YBP PDB:2YBS PDBsum:2YBP
PDBsum:2YBS PDB:3U4S PDBsum:3U4S CTD:9682 EMBL:AB014577
EMBL:AL451062 EMBL:AC092815 EMBL:BC002558 IPI:IPI00005666
RefSeq:NP_055478.2 UniGene:Hs.155983 PDB:2GF7 PDB:2GFA PDB:2GP3
PDB:2GP5 PDB:2OQ6 PDB:2OQ7 PDB:2OS2 PDB:2OT7 PDB:2OX0 PDB:2P5B
PDB:2PXJ PDB:2Q8C PDB:2Q8D PDB:2Q8E PDB:2QQR PDB:2QQS PDB:2VD7
PDB:2WWJ PDB:2YBK PDB:3NJY PDB:3PDQ PDB:3RVH PDB:4AI9 PDB:4GD4
PDBsum:2GF7 PDBsum:2GFA PDBsum:2GP3 PDBsum:2GP5 PDBsum:2OQ6
PDBsum:2OQ7 PDBsum:2OS2 PDBsum:2OT7 PDBsum:2OX0 PDBsum:2P5B
PDBsum:2PXJ PDBsum:2Q8C PDBsum:2Q8D PDBsum:2Q8E PDBsum:2QQR
PDBsum:2QQS PDBsum:2VD7 PDBsum:2WWJ PDBsum:2YBK PDBsum:3NJY
PDBsum:3PDQ PDBsum:3RVH PDBsum:4AI9 PDBsum:4GD4
ProteinModelPortal:O75164 SMR:O75164 DIP:DIP-29372N IntAct:O75164
MINT:MINT-2829088 STRING:O75164 PhosphoSite:O75164 PRIDE:O75164
Ensembl:ENST00000372396 GeneID:9682 KEGG:hsa:9682 UCSC:uc001cjx.3
GeneCards:GC01P044115 H-InvDB:HIX0020610 HGNC:HGNC:22978
HPA:HPA007610 MIM:609764 neXtProt:NX_O75164 PharmGKB:PA164721403
HOGENOM:HOG000231125 InParanoid:O75164 KO:K06709 OMA:KRTAGCC
OrthoDB:EOG4QRH37 PhylomeDB:O75164 BindingDB:O75164
ChEMBL:CHEMBL5896 ChiTaRS:Kdm4A EvolutionaryTrace:O75164
GenomeRNAi:9682 NextBio:36361 ArrayExpress:O75164 Bgee:O75164
CleanEx:HS_JMJD2A Genevestigator:O75164 GermOnline:ENSG00000066135
Uniprot:O75164
Length = 1064
Score = 284 (105.0 bits), Expect = 4.9e-26, Sum P(3) = 4.9e-26
Identities = 65/197 (32%), Positives = 102/197 (51%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
EE+E Y +NL TF P + ++K++ WN+ L + L+ ES T
Sbjct: 115 EELERKYWKNL---TFNP--PIYGADVNGTLYEKHVDE-WNIGRLRTIL-DLVEKESGIT 167
Query: 383 CN-LLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYL 441
+ P L+ GM TS W E+ L S+ Y+H G PK W+S+P + + + AK +
Sbjct: 168 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFF 227
Query: 442 PTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSE 501
P + + + +SP LK G+P + TQ GEF++ F Y++GF+ GFNC+E
Sbjct: 228 PGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAE 287
Query: 502 SVNFAPIEWLPHGQNAI 518
S NFA W+ +G+ A+
Sbjct: 288 STNFATRRWIEYGKQAV 304
Score = 98 (39.6 bits), Expect = 4.9e-26, Sum P(3) = 4.9e-26
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKE-NDIWKSSKFVTQIQ 201
FYPT EEF + +YIA + + + G+ ++VPP WKP + +D+ + +
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDDLVIPAPIQQLVT 76
Query: 202 QIDGLQNQYFSSKAA 216
GL QY K A
Sbjct: 77 GQSGLFTQYNIQKKA 91
Score = 45 (20.9 bits), Expect = 4.9e-26, Sum P(3) = 4.9e-26
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 660 ELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRPNSQAEE 704
+L+V +V G+L V+ +K L S SSRD + +S+ E
Sbjct: 487 DLSVNPASVGGRL--VFSGSKKKSSSSLGSGSSRDSISSDSETSE 529
>RGD|1591045 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
RGD:1591045 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 eggNOG:NOG317950
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:BC128760 IPI:IPI00767164 RefSeq:NP_001073180.1
RefSeq:XP_003750480.1 RefSeq:XP_003750481.1 UniGene:Rn.202733
ProteinModelPortal:A1A5Q5 SMR:A1A5Q5 PRIDE:A1A5Q5
Ensembl:ENSRNOT00000033932 GeneID:100909834 GeneID:689582
KEGG:rno:100909834 KEGG:rno:689582 UCSC:RGD:1591045 NextBio:738978
Genevestigator:A1A5Q5 Uniprot:A1A5Q5
Length = 510
Score = 274 (101.5 bits), Expect = 6.1e-26, Sum P(2) = 6.1e-26
Identities = 61/177 (34%), Positives = 95/177 (53%)
Query: 362 WNLNNLPMLPGSLLSSESCKTCNLLV-----PRLHVGMCFTSIYWKVEEHCLCSLYYMHL 416
WN+ +L + LL E C +++ P L+ GM TS W E+ L S+ Y+H
Sbjct: 149 WNVGHLGTIQ-DLLEQE----CGIVIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHF 203
Query: 417 GAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQ 476
G PK W+++P + + + AK+ P S + VA +SP+ LK G+P R TQ
Sbjct: 204 GQPKTWYAVPPEHGRRLELLAKELFPGSSQGCQAFLRHKVALISPTVLKENGIPFGRITQ 263
Query: 477 SPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHD 533
GEF++ F Y++GF+ GFNC+E++NFA W+ +G+ A + + R S S D
Sbjct: 264 EAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKVASQCSCGEAR-VSFSMD 319
Score = 94 (38.1 bits), Expect = 6.1e-26, Sum P(2) = 6.1e-26
Identities = 27/93 (29%), Positives = 45/93 (48%)
Query: 143 VFYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQIQ 201
+F PT+EEF+D KYIA + + + G+ +++PP W+ + D + T +Q
Sbjct: 17 IFRPTKEEFNDFDKYIAYMESQGAHRAGLAKVIPPKEWRAR---QSYDNISNILIATPLQ 73
Query: 202 QI----DGLQNQYFSSKAAKIYDNVN--SNSKR 228
Q+ G+ QY K A +NSK+
Sbjct: 74 QVVSGQAGVFTQYHKKKKAMTVGQYRHLANSKK 106
>UNIPROTKB|Q5RD88 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9601
"Pongo abelii" [GO:0035064 "methylated histone residue binding"
evidence=ISS] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:9682 KO:K06709 EMBL:CR858028
RefSeq:NP_001125120.1 UniGene:Pab.1791 ProteinModelPortal:Q5RD88
SMR:Q5RD88 GeneID:100172003 KEGG:pon:100172003 InParanoid:Q5RD88
Uniprot:Q5RD88
Length = 1064
Score = 284 (105.0 bits), Expect = 6.3e-26, Sum P(3) = 6.3e-26
Identities = 65/197 (32%), Positives = 102/197 (51%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
EE+E Y +NL TF P + ++K++ WN+ L + L+ ES T
Sbjct: 115 EELERKYWKNL---TFNP--PIYGADVNGTLYEKHVDE-WNIGRLRTIL-DLVEKESGIT 167
Query: 383 CN-LLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYL 441
+ P L+ GM TS W E+ L S+ Y+H G PK W+S+P + + + AK +
Sbjct: 168 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFF 227
Query: 442 PTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSE 501
P + + + +SP LK G+P + TQ GEF++ F Y++GF+ GFNC+E
Sbjct: 228 PGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAE 287
Query: 502 SVNFAPIEWLPHGQNAI 518
S NFA W+ +G+ A+
Sbjct: 288 STNFATRRWIEYGKQAV 304
Score = 98 (39.6 bits), Expect = 6.3e-26, Sum P(3) = 6.3e-26
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKE-NDIWKSSKFVTQIQ 201
FYPT EEF + +YIA + + + G+ ++VPP WKP + +D+ + +
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDDLVIPAPIQQLVT 76
Query: 202 QIDGLQNQYFSSKAA 216
GL QY K A
Sbjct: 77 GQSGLFTQYNIQKKA 91
Score = 44 (20.5 bits), Expect = 6.3e-26, Sum P(3) = 6.3e-26
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 660 ELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRPNSQAEE 704
+L+V +V G+L V+ +K L S SSRD + +S+ E
Sbjct: 487 DLSVNPASVGGRL--VFSGSKKKSSSSLGSGSSRDSVSSDSETSE 529
>UNIPROTKB|B2RXH2 [details] [associations]
symbol:KDM4E "Lysine-specific demethylase 4E" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 eggNOG:NOG317950 HOGENOM:HOG000231125 EMBL:AP002383
EMBL:BC157851 EMBL:BC157889 EMBL:BC171916 IPI:IPI00887640
RefSeq:NP_001155102.1 UniGene:Hs.714692 PDB:2W2I PDBsum:2W2I
ProteinModelPortal:B2RXH2 SMR:B2RXH2 PRIDE:B2RXH2
Ensembl:ENST00000450979 Ensembl:ENST00000576054 GeneID:390245
KEGG:hsa:390245 UCSC:uc010ruf.1 CTD:390245 GeneCards:GC11P094759
HGNC:HGNC:37098 neXtProt:NX_B2RXH2 PharmGKB:PA165543440 OMA:PESYELW
OrthoDB:EOG45491F BindingDB:B2RXH2 ChEMBL:CHEMBL1293226
EvolutionaryTrace:B2RXH2 GenomeRNAi:390245 NextBio:103576
Uniprot:B2RXH2
Length = 506
Score = 266 (98.7 bits), Expect = 9.1e-26, Sum P(2) = 9.1e-26
Identities = 65/203 (32%), Positives = 109/203 (53%)
Query: 362 WNLNNLPMLPGSLLSSESCKTC--NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAP 419
WNL +L + LL E C + P L+ GM T+ W E+ L S+ Y+H G P
Sbjct: 149 WNLGHLGTIL-DLLEQE-CGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEP 206
Query: 420 KIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRC-TQSP 478
K W+ +P + + A++ P +S + VA +SP+ LK G+P + C TQ
Sbjct: 207 KTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALISPTVLKENGIP-FNCMTQEA 265
Query: 479 GEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKT-SISHD---K 534
GEF++ F Y++GF+ GFNC+E++NFA W+ +G+ A + G T + S D +
Sbjct: 266 GEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQC--SCGESTVTFSMDPFVR 323
Query: 535 LLLGAAREVVKTQWEISLVKKHT 557
++ + E+ K + ++++V+ HT
Sbjct: 324 IVQPESYELWKHRQDLAIVE-HT 345
Score = 101 (40.6 bits), Expect = 9.1e-26, Sum P(2) = 9.1e-26
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 129 SPEGAKNDVLEEAPVFYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKE 187
SP+ + ++ FYPT EEF+D Y+A + + + + G+ +++PP WK +
Sbjct: 7 SPQNTSHTIM----TFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMY-- 60
Query: 188 NDIWKSSKFVTQIQQID----GLQNQYFSSKAA 216
+DI + T +QQ+ G+ QY K A
Sbjct: 61 DDI-EDILIATPLQQVTSGQGGVFTQYHKKKKA 92
>MGI|MGI:2446210 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0014898 "cardiac muscle hypertrophy in response to stress"
evidence=IMP] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 MGI:MGI:2446210 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 GO:GO:0035064 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC OrthoDB:EOG4QRH37 ChiTaRS:Kdm4A EMBL:AK129187
EMBL:AK054095 EMBL:AK136085 EMBL:AK145066 EMBL:AK145947
EMBL:AL626764 EMBL:BC028866 IPI:IPI00169645 IPI:IPI00648673
RefSeq:NP_001155295.1 RefSeq:NP_759014.2 UniGene:Mm.234234
ProteinModelPortal:Q8BW72 SMR:Q8BW72 STRING:Q8BW72
PhosphoSite:Q8BW72 PRIDE:Q8BW72 Ensembl:ENSMUST00000097911
Ensembl:ENSMUST00000106403 Ensembl:ENSMUST00000106406 GeneID:230674
KEGG:mmu:230674 HOVERGEN:HBG080483 InParanoid:A2A8L8 NextBio:380043
Bgee:Q8BW72 CleanEx:MM_JMJD2A Genevestigator:Q8BW72
GermOnline:ENSMUSG00000033326 Uniprot:Q8BW72
Length = 1064
Score = 281 (104.0 bits), Expect = 1.7e-25, Sum P(3) = 1.7e-25
Identities = 64/197 (32%), Positives = 102/197 (51%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
EE+E Y +NL TF P + +++++ WN+ L + L+ ES T
Sbjct: 115 EELERKYWKNL---TFNP--PIYGADVNGTLYEQHVDE-WNIGRLKTIL-DLVEKESGIT 167
Query: 383 CN-LLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYL 441
+ P L+ GM TS W E+ L S+ Y+H G PK W+S+P + + + AK +
Sbjct: 168 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFF 227
Query: 442 PTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSE 501
P + + + +SP LK G+P + TQ GEF++ F Y++GF+ GFNC+E
Sbjct: 228 PGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAE 287
Query: 502 SVNFAPIEWLPHGQNAI 518
S NFA W+ +G+ A+
Sbjct: 288 STNFATRRWIEYGKQAV 304
Score = 97 (39.2 bits), Expect = 1.7e-25, Sum P(3) = 1.7e-25
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKE-NDIWKSSKFVTQIQ 201
FYPT EEF + +YIA + + + G+ ++VPP WKP + +D+ + +
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRTSYDDIDDLVIPAPIQQLVT 76
Query: 202 QIDGLQNQYFSSKAA 216
GL QY K A
Sbjct: 77 GQSGLFTQYNIQKKA 91
Score = 44 (20.5 bits), Expect = 1.7e-25, Sum P(3) = 1.7e-25
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 660 ELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRPNSQAEES 705
+L+V +V G+L V+ +K L S SS+D + +S+ ES
Sbjct: 487 DLSVNPASVGGRL--VFSGSKKKSSSSLGSTSSQDSVSSDSETAES 530
>UNIPROTKB|E2RFE0 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:AAEX03009807 EMBL:AAEX03009806 RefSeq:XP_851005.1
Ensembl:ENSCAFT00000007898 GeneID:482530 KEGG:cfa:482530
NextBio:20857109 Uniprot:E2RFE0
Length = 1066
Score = 285 (105.4 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 65/197 (32%), Positives = 102/197 (51%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
EE+E Y +NL TF P + ++K++ WN+ L + L+ ES T
Sbjct: 115 EELERKYWKNL---TFNP--PIYGADVNGTLYEKHVDE-WNIGRLKTIL-DLVEKESGIT 167
Query: 383 CN-LLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYL 441
+ P L+ GM TS W E+ L S+ Y+H G PK W+S+P + + + AK +
Sbjct: 168 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFF 227
Query: 442 PTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSE 501
P + + + +SP LK G+P + TQ GEF++ F Y++GF+ GFNC+E
Sbjct: 228 PGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAE 287
Query: 502 SVNFAPIEWLPHGQNAI 518
S NFA W+ +G+ A+
Sbjct: 288 STNFATRRWIEYGKQAV 304
Score = 95 (38.5 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKE-NDIWKSSKFVTQIQ 201
FYPT EEF + +Y+A + + + G+ ++VPP WKP + +D+ + +
Sbjct: 17 FYPTMEEFRNFSRYMAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDDLVIPAPIQQLVT 76
Query: 202 QIDGLQNQYFSSKAA 216
GL QY K A
Sbjct: 77 GQSGLFTQYNIQKKA 91
Score = 41 (19.5 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 660 ELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRPNSQAEE 704
+L+V ++ G+L V +K L S SSRD + +S+ E
Sbjct: 489 DLSVNPASIGGRL--VLSGSKKKSSSSLGSSSSRDSISSDSETSE 531
>FB|FBgn0053182 [details] [associations]
symbol:Kdm4B "Histone demethylase 4B" species:7227
"Drosophila melanogaster" [GO:0016577 "histone demethylation"
evidence=ISS] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=ISS;IDA;IMP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IDA;IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IDA;IMP] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 EMBL:AE013599 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0006351 GO:GO:0016702
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 KO:K06709 RefSeq:NP_001163137.1 RefSeq:NP_001163138.1
RefSeq:NP_001163139.1 RefSeq:NP_788344.2 UniGene:Dm.6975
ProteinModelPortal:Q9V6L0 SMR:Q9V6L0 PaxDb:Q9V6L0
EnsemblMetazoa:FBtr0087770 EnsemblMetazoa:FBtr0302052
EnsemblMetazoa:FBtr0302053 EnsemblMetazoa:FBtr0302054 GeneID:318918
KEGG:dme:Dmel_CG33182 UCSC:CG33182-RA CTD:23030 FlyBase:FBgn0053182
InParanoid:Q9V6L0 OMA:MERWIEY OrthoDB:EOG4NVX19 PhylomeDB:Q9V6L0
GenomeRNAi:318918 NextBio:846567 GermOnline:CG33182 Uniprot:Q9V6L0
Length = 590
Score = 270 (100.1 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 70/233 (30%), Positives = 113/233 (48%)
Query: 290 MTVDENPLVFKKQGEPSLENIEGEYRRIIENPTEEIEVLYGENLE--TGTFGSGFPTVSN 347
+ + + PL K+ E L + E Y E++E Y +N+ +G+ VS
Sbjct: 83 INIQKKPLTVKQFSE--LASTE-RYATPKHFDFEDLERKYWKNITYVAPIYGAD---VSG 136
Query: 348 PCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHC 407
+D + WN+N L + + + + + L+ GM T+ W E+
Sbjct: 137 SITDTD-----QDSWNINRLGTILDYVNKDYNIQIDGVNTAYLYFGMWKTTFAWHTEDMD 191
Query: 408 LCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASL-SPSPLKS 466
L S+ Y+H GAPK W+ +P K + A +Y P S+K + R +L SP LK
Sbjct: 192 LYSINYLHFGAPKTWYVVPPECGRKLEKVANQYFPA-SYKNCNAYLRHKMTLISPQILKQ 250
Query: 467 EGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIE 519
VPV + TQ GE ++ F Y++GF+ GFNC+ES NFA W+ +G+ A++
Sbjct: 251 HDVPVSKITQEAGEIMITFPFGYHAGFNHGFNCAESTNFAMERWIEYGKRAVQ 303
Score = 97 (39.2 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 138 LEEAP---VFYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKP 181
+ E P VF PT EEF D KY+A + + + + G+ ++VPPP W P
Sbjct: 3 MSEVPRIKVFRPTWEEFKDFPKYVAYMESQGAHKAGLAKVVPPPEWVP 50
>MGI|MGI:3606484 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:3606484 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
EMBL:CT485607 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
GeneTree:ENSGT00530000063342 eggNOG:NOG317950 OMA:FASKRWI
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:AK030020 EMBL:AK155227 EMBL:BC112372 IPI:IPI00651810
RefSeq:NP_775609.2 UniGene:Mm.240457 ProteinModelPortal:Q3U2K5
SMR:Q3U2K5 PhosphoSite:Q3U2K5 PRIDE:Q3U2K5 DNASU:244694
Ensembl:ENSMUST00000058796 Ensembl:ENSMUST00000115647 GeneID:244694
KEGG:mmu:244694 UCSC:uc009oen.1 InParanoid:A2CGB5 NextBio:386391
Bgee:Q3U2K5 CleanEx:MM_JMJD2D Genevestigator:Q3U2K5 Uniprot:Q3U2K5
Length = 510
Score = 269 (99.8 bits), Expect = 6.1e-25, Sum P(2) = 6.1e-25
Identities = 71/232 (30%), Positives = 115/232 (49%)
Query: 312 GEYRRIIENPTEEIEV-LYGENLETGTFGSGFPTVSNPCEASDHQKYLKSG----WNLNN 366
GEYR + + + L E+LE + + +P +D L G WN+ +
Sbjct: 96 GEYRELANSKKYQTPPHLDFEDLERKYWKNRL--YESPIYGADVSGSLFDGKTQQWNVGH 153
Query: 367 LPMLPGSLLSSESCKTCNLLV-----PRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKI 421
L + LL E C +++ P L+ GM T+ W E+ L S+ Y+H G PK
Sbjct: 154 LGTIQ-DLLEQE----CGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQPKT 208
Query: 422 WHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEF 481
W+++P + + + A++ P S + VA +SP+ LK G+P R TQ GEF
Sbjct: 209 WYAVPPEHGRRLERLARELFPGSSQGCQAFLRHKVALISPTVLKENGIPFGRITQEAGEF 268
Query: 482 VLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHD 533
++ F Y++GF+ GFNC+E++NFA W+ +G+ A + + R S S D
Sbjct: 269 MVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKVASQCSCGEAR-VSFSMD 319
Score = 90 (36.7 bits), Expect = 6.1e-25, Sum P(2) = 6.1e-25
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 143 VFYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQIQ 201
+F PT+EEF+D KYIA + + + G+ +++PP W+ + D + T +Q
Sbjct: 17 IFRPTKEEFNDFDKYIAYMESQGAHRAGLAKVIPPKEWRAR---QSYDNISNILIATPLQ 73
Query: 202 QI----DGLQNQYFSSKAAKIYDNVN--SNSKR 228
Q+ G+ QY K +NSK+
Sbjct: 74 QVVSGQAGVFTQYHKKKKGMTVGEYRELANSKK 106
>UNIPROTKB|E1BA41 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 KO:K06709 CTD:23030
OMA:QTEKEAP EMBL:DAAA02019590 EMBL:DAAA02019591 EMBL:DAAA02019592
IPI:IPI00689692 RefSeq:XP_002688966.2 RefSeq:XP_584880.4
Ensembl:ENSBTAT00000020586 GeneID:508141 KEGG:bta:508141
Uniprot:E1BA41
Length = 1116
Score = 272 (100.8 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 87/317 (27%), Positives = 145/317 (45%)
Query: 312 GEYRRIIEN-----PT----EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGW 362
GEYRR+ + P +++E Y +NL TF S P S + + W
Sbjct: 96 GEYRRLANSEKYCTPRHQDFDDLERKYWKNL---TFVS--PIYGADISGSLYDDDVAQ-W 149
Query: 363 NLNNLPMLPGSLLSSESCKTC--NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPK 420
N+ NL + ++ E C T + P L+ GM T+ W E+ L S+ Y+H G PK
Sbjct: 150 NIGNLRTIL-DMVERE-CGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPK 207
Query: 421 IWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGE 480
W++IP + + + A + P S + + +SP LK G+P R TQ GE
Sbjct: 208 SWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGE 267
Query: 481 FVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELY-REQGRKTSISHDKLLLGA 539
F++ F Y++GF+ GFNC+ES NFA + W+ +G+ A + R+ K S+ +L
Sbjct: 268 FMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFVRILQP 327
Query: 540 AREVVKTQWEISLVKKHTSDNFM-------WRHVSGKDGILAKALKSRINSESNRRKYLC 592
R + Q + V HT + W + + + AK L+ +I+ + NR
Sbjct: 328 ERYELWKQGKDLTVLDHTRPTALSSPELSTWS--ASRASLKAKLLRRQISLKENRHWKKT 385
Query: 593 SSSQSQRMDKNFDYTSK 609
+ +++ + T +
Sbjct: 386 EEERKPSLERKKEQTRR 402
Score = 97 (39.2 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 132 GAKNDVLEEAPVFYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKE-ND 189
GA+N + F PT EEF D KY+A + + + G+ +I+PP WKP + +D
Sbjct: 7 GAQNPSCK-IMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDD 65
Query: 190 IWKSSKFVTQIQQIDGLQNQYFSSKAA 216
+ + + GL QY K A
Sbjct: 66 VVIPAPIQQVVTGQSGLFTQYNIQKKA 92
>ZFIN|ZDB-GENE-030131-6279 [details] [associations]
symbol:kdm4ab "lysine (K)-specific demethylase 4A,
genome duplicate b" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 ZFIN:ZDB-GENE-030131-6279 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
HOGENOM:HOG000231125 OrthoDB:EOG4QRH37 HOVERGEN:HBG080483
IPI:IPI00489014 EMBL:BC047193 UniGene:Dr.24248
ProteinModelPortal:Q802U7 STRING:Q802U7 ArrayExpress:Q802U7
Uniprot:Q802U7
Length = 895
Score = 274 (101.5 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 61/196 (31%), Positives = 99/196 (50%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
EE+E Y +N+ TF P + + +K WN+ +L + ++
Sbjct: 112 EELERKYWKNV---TFNP--PIYGADVNGTLYDPDIKE-WNVGHLNTILDTVEHESGITI 165
Query: 383 CNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLP 442
+ P L+ GM T+ W E+ L S+ Y+H G PK W+++P + + + AK + P
Sbjct: 166 EGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYTVPPEHGKRLERLAKGFFP 225
Query: 443 TLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSES 502
S + + +SPS LK G+P + TQ GEF++ F Y++GF+ GFNC+ES
Sbjct: 226 GSSQNCEAFLRHKMTLISPSILKKYGIPFEKITQEAGEFMVTFPYGYHAGFNHGFNCAES 285
Query: 503 VNFAPIEWLPHGQNAI 518
NFA W+ +G+ AI
Sbjct: 286 TNFATRRWIDYGKQAI 301
Score = 92 (37.4 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKP 181
F+PT EEF + +YIA + + + + G+ +IVPP +WKP
Sbjct: 14 FHPTVEEFKNFSRYIAYMESQGAHKAGLAKIVPPKNWKP 52
>ZFIN|ZDB-GENE-070705-160 [details] [associations]
symbol:si:ch211-262l3.1 "si:ch211-262l3.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 ZFIN:ZDB-GENE-070705-160 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX640408 EMBL:CABZ01059930
EMBL:CABZ01059931 IPI:IPI00489014 Ensembl:ENSDART00000024302
OMA:VKEWNIC ArrayExpress:F1QNG0 Bgee:F1QNG0 Uniprot:F1QNG0
Length = 895
Score = 274 (101.5 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 61/196 (31%), Positives = 99/196 (50%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
EE+E Y +N+ TF P + + +K WN+ +L + ++
Sbjct: 112 EELERKYWKNV---TFNP--PIYGADVNGTLYDPDIKE-WNVGHLNTILDTVEHESGITI 165
Query: 383 CNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLP 442
+ P L+ GM T+ W E+ L S+ Y+H G PK W+++P + + + AK + P
Sbjct: 166 EGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYTVPPEHGKRLERLAKGFFP 225
Query: 443 TLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSES 502
S + + +SPS LK G+P + TQ GEF++ F Y++GF+ GFNC+ES
Sbjct: 226 GSSQNCEAFLRHKMTLISPSILKKYGIPFEKITQEAGEFMVTFPYGYHAGFNHGFNCAES 285
Query: 503 VNFAPIEWLPHGQNAI 518
NFA W+ +G+ AI
Sbjct: 286 TNFATRRWIDYGKQAI 301
Score = 92 (37.4 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKP 181
F+PT EEF + +YIA + + + + G+ +IVPP +WKP
Sbjct: 14 FHPTVEEFKNFSRYIAYMESQGAHKAGLAKIVPPKNWKP 52
>UNIPROTKB|E1BX38 [details] [associations]
symbol:Gga.52669 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AADN02062013
IPI:IPI00735114 Ensembl:ENSGALT00000006511 ArrayExpress:E1BX38
Uniprot:E1BX38
Length = 1095
Score = 282 (104.3 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 73/222 (32%), Positives = 113/222 (50%)
Query: 312 GEYRRIIEN-----PT----EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGW 362
GEYRR+ + P E++E Y +NL TF S P S + ++ W
Sbjct: 96 GEYRRLANSEKYCTPRHQDFEDLERKYWKNL---TFVS--PIYGADISGSLYDTDVEE-W 149
Query: 363 NLNNLPMLPGSLLSSESCKTCNLLV-----PRLHVGMCFTSIYWKVEEHCLCSLYYMHLG 417
N+ NL L ++ E C +++ P L+ GM T+ W E+ L S+ Y+H G
Sbjct: 150 NIGNLNTLL-DMVEHE----CGIIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFG 204
Query: 418 APKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQS 477
PK W++IP + + + AK + P S + + +SPS LK G+P R TQ
Sbjct: 205 EPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLRHKMTLISPSILKKYGIPFDRITQE 264
Query: 478 PGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIE 519
GEF++ F Y++GF+ GFNC+ES NFA + W+ +G+ A +
Sbjct: 265 AGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKMATQ 306
Score = 85 (35.0 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKP 181
F PT EEF + KY+A + + + G+ +++PP WKP
Sbjct: 18 FRPTLEEFREFGKYVAYIESQGAHRAGLAKVIPPKEWKP 56
>UNIPROTKB|F5GX28 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AC005595
EMBL:AC022517 HGNC:HGNC:29136 ChiTaRS:KDM4B EMBL:AC053467
EMBL:AC093033 EMBL:AC104520 IPI:IPI00922876
ProteinModelPortal:F5GX28 SMR:F5GX28 Ensembl:ENST00000536461
UCSC:uc010xim.2 OMA:QTEKEAP ArrayExpress:F5GX28 Bgee:F5GX28
Uniprot:F5GX28
Length = 1130
Score = 268 (99.4 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 86/317 (27%), Positives = 145/317 (45%)
Query: 312 GEYRRIIEN-----PT----EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGW 362
GEYRR+ + P +++E Y +NL TF S P S + + W
Sbjct: 96 GEYRRLANSEKYCTPRHQDFDDLERKYWKNL---TFVS--PIYGADISGSLYDDDVAQ-W 149
Query: 363 NLNNLPMLPGSLLSSESCKTC--NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPK 420
N+ +L + ++ E C T + P L+ GM T+ W E+ L S+ Y+H G PK
Sbjct: 150 NIGSLRTIL-DMVERE-CGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPK 207
Query: 421 IWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGE 480
W++IP + + + A + P S + + +SP LK G+P R TQ GE
Sbjct: 208 SWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGE 267
Query: 481 FVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELY-REQGRKTSISHDKLLLGA 539
F++ F Y++GF+ GFNC+ES NFA + W+ +G+ A + R+ K S+ +L
Sbjct: 268 FMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFVRILQP 327
Query: 540 AREVVKTQWEISLVKKHTSDNFM-------WRHVSGKDGILAKALKSRINSESNRRKYLC 592
R + Q + V HT + W + + + AK L+ +I+ + NR
Sbjct: 328 ERYELWKQGKDLTVLDHTRPTALTSPELSSWS--ASRASLKAKLLRRQISLKENRHWRKT 385
Query: 593 SSSQSQRMDKNFDYTSK 609
+ +++ + T +
Sbjct: 386 EEERKPSLERKKEQTKR 402
Score = 97 (39.2 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 132 GAKNDVLEEAPVFYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKE-ND 189
GA+N + F PT EEF D KY+A + + + G+ +I+PP WKP + +D
Sbjct: 7 GAQNPSCK-IMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDD 65
Query: 190 IWKSSKFVTQIQQIDGLQNQYFSSKAA 216
+ + + GL QY K A
Sbjct: 66 VVIPAPIQQVVTGQSGLFTQYNIQKKA 92
>UNIPROTKB|E2R243 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AAEX03012537
EMBL:AAEX03012538 EMBL:AAEX03012539 Ensembl:ENSCAFT00000030040
Uniprot:E2R243
Length = 1133
Score = 266 (98.7 bits), Expect = 6.4e-24, Sum P(2) = 6.4e-24
Identities = 85/295 (28%), Positives = 138/295 (46%)
Query: 312 GEYRRIIEN-----PT----EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGW 362
GEYRR+ + P +++E Y +NL TF S P S + + W
Sbjct: 96 GEYRRLANSEKYCTPRHQDFDDLERKYWKNL---TFVS--PIYGADISGSLYDDDVAQ-W 149
Query: 363 NLNNLPMLPGSLLSSESCKTC--NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPK 420
N+ +L + ++ E C T + P L+ GM T+ W E+ L S+ Y+H G PK
Sbjct: 150 NIGSLRTIL-DMVERE-CGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPK 207
Query: 421 IWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGE 480
W++IP + + + A + P S + + +SP LK G+P R TQ GE
Sbjct: 208 SWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGE 267
Query: 481 FVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELY-REQGRKTSISHDKLLLGA 539
F++ F Y++GF+ GFNC+ES NFA + W+ +G+ A + R+ K S+ +L
Sbjct: 268 FMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFVRILQP 327
Query: 540 AREVVKTQWEISLVKKHTSDNFM-------WRHVSGKDGILAKALKSRINSESNR 587
R + Q + V HT + W + + + AK L+ +I+ + NR
Sbjct: 328 ERYELWKQGKDLTVLDHTRPTALSSPELSTWS--ASRASLKAKLLRRQISLKENR 380
Score = 97 (39.2 bits), Expect = 6.4e-24, Sum P(2) = 6.4e-24
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 132 GAKNDVLEEAPVFYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKE-ND 189
GA+N + F PT EEF D KY+A + + + G+ +I+PP WKP + +D
Sbjct: 7 GAQNPSCK-IMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDD 65
Query: 190 IWKSSKFVTQIQQIDGLQNQYFSSKAA 216
+ + + GL QY K A
Sbjct: 66 VVIPAPIQQVVTGQSGLFTQYNIQKKA 92
>UNIPROTKB|O94953 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 EMBL:CH471139 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 KO:K06709 CTD:23030 EMBL:AB020683 EMBL:AC005595
EMBL:AC022517 EMBL:BC063889 EMBL:BC136611 EMBL:AL133622
IPI:IPI00013205 IPI:IPI00440491 PIR:T43460 RefSeq:NP_055830.1
UniGene:Hs.654816 ProteinModelPortal:O94953 SMR:O94953
DIP:DIP-47283N IntAct:O94953 MINT:MINT-1427202 STRING:O94953
PhosphoSite:O94953 PaxDb:O94953 PRIDE:O94953
Ensembl:ENST00000159111 Ensembl:ENST00000381759 GeneID:23030
KEGG:hsa:23030 UCSC:uc002mbq.4 UCSC:uc010xil.1
GeneCards:GC19P004969 HGNC:HGNC:29136 MIM:609765 neXtProt:NX_O94953
PharmGKB:PA164721452 InParanoid:O94953 OrthoDB:EOG4N5VW5
PhylomeDB:O94953 ChiTaRS:KDM4B GenomeRNAi:23030 NextBio:44006
ArrayExpress:O94953 Bgee:O94953 CleanEx:HS_JMJD2B
Genevestigator:O94953 Uniprot:O94953
Length = 1096
Score = 265 (98.3 bits), Expect = 7.5e-24, Sum P(2) = 7.5e-24
Identities = 82/290 (28%), Positives = 135/290 (46%)
Query: 312 GEYRRIIEN-----PT----EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGW 362
GEYRR+ + P +++E Y +NL TF S P S + + W
Sbjct: 96 GEYRRLANSEKYCTPRHQDFDDLERKYWKNL---TFVS--PIYGADISGSLYDDDVAQ-W 149
Query: 363 NLNNLPMLPGSLLSSESCKTC--NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPK 420
N+ +L + ++ E C T + P L+ GM T+ W E+ L S+ Y+H G PK
Sbjct: 150 NIGSLRTIL-DMVERE-CGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPK 207
Query: 421 IWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGE 480
W++IP + + + A + P S + + +SP LK G+P R TQ GE
Sbjct: 208 SWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGE 267
Query: 481 FVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELY-REQGRKTSISHDKLLLGA 539
F++ F Y++GF+ GFNC+ES NFA + W+ +G+ A + R+ K S+ +L
Sbjct: 268 FMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFVRILQP 327
Query: 540 AREVVKTQWEISLVKKHTSDNFMWRHVSGKDGILAKALKSRINSESNRRK 589
R + Q + V HT + +LK+++ S+R++
Sbjct: 328 ERYELWKQGKDLTVLDHTRPTALTSPELSSWSASRASLKAKLLRRSHRKR 377
Score = 97 (39.2 bits), Expect = 7.5e-24, Sum P(2) = 7.5e-24
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 132 GAKNDVLEEAPVFYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKE-ND 189
GA+N + F PT EEF D KY+A + + + G+ +I+PP WKP + +D
Sbjct: 7 GAQNPSCK-IMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDD 65
Query: 190 IWKSSKFVTQIQQIDGLQNQYFSSKAA 216
+ + + GL QY K A
Sbjct: 66 VVIPAPIQQVVTGQSGLFTQYNIQKKA 92
>ZFIN|ZDB-GENE-060503-664 [details] [associations]
symbol:kdm4b "lysine (K)-specific demethylase 4B"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-060503-664
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
HOGENOM:HOG000231125 KO:K06709 HOVERGEN:HBG080483 CTD:23030
OrthoDB:EOG4N5VW5 EMBL:BX927276 OMA:QTEKEAP EMBL:BC171698
EMBL:BC171700 IPI:IPI00775179 RefSeq:NP_001076274.1
UniGene:Dr.81759 SMR:Q1LUQ0 Ensembl:ENSDART00000034084
Ensembl:ENSDART00000128161 GeneID:556504 KEGG:dre:556504
InParanoid:Q1LUQ0 NextBio:20881518 Uniprot:Q1LUQ0
Length = 1134
Score = 264 (98.0 bits), Expect = 3.6e-23, Sum P(2) = 3.6e-23
Identities = 74/247 (29%), Positives = 117/247 (47%)
Query: 312 GEYRRIIEN-----PT----EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGW 362
GEYR++ + P +++E Y +NL TF S P S + + S W
Sbjct: 176 GEYRKLANSKKYNTPQHKDFDDLERKYWKNL---TFVS--PIYGADISGSLYDPDI-SEW 229
Query: 363 NLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIW 422
N+ +L L + + P L+ GM T+ W E+ L S+ Y+H G PK W
Sbjct: 230 NIGHLNTLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGKPKSW 289
Query: 423 HSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFV 482
++IP + + + A+ + P S + + +SPS LK +P R TQ GEF+
Sbjct: 290 YAIPPEHGKRLERLAQGFFPGSSQGCDAFLRHKMTLISPSILKKYSIPFDRITQEEGEFM 349
Query: 483 LVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDKLLLGAARE 542
+ F Y++GF+ GFNC+ES NFA + W+ +G+ A + + IS D + E
Sbjct: 350 ITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKMAAQCTCRKDM-VKISMDVFVRRLQPE 408
Query: 543 VVKTQWE 549
TQW+
Sbjct: 409 RY-TQWK 414
Score = 92 (37.4 bits), Expect = 3.6e-23, Sum P(2) = 3.6e-23
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 130 PEGAK-NDVLEEAPVFYPTEEEFSDTLKYIASVRLKSEEY-GICRIVPPPSWKP 181
P GA N ++ F PT EEF D KYIA + + G+ +++PP WKP
Sbjct: 87 PPGANFNKIM----TFRPTMEEFKDFGKYIAYMETQGAHVAGLAKVIPPKEWKP 136
>MGI|MGI:2442355 [details] [associations]
symbol:Kdm4b "lysine (K)-specific demethylase 4B"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 MGI:MGI:2442355
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000231125
KO:K06709 CTD:23030 OrthoDB:EOG4N5VW5 ChiTaRS:KDM4B EMBL:AK129233
EMBL:AK141879 EMBL:BC005480 EMBL:BC007145 IPI:IPI00127444
IPI:IPI00460708 RefSeq:NP_742144.1 UniGene:Mm.45047
ProteinModelPortal:Q91VY5 SMR:Q91VY5 STRING:Q91VY5
PhosphoSite:Q91VY5 PRIDE:Q91VY5 Ensembl:ENSMUST00000025036
GeneID:193796 KEGG:mmu:193796 UCSC:uc008dbu.2 InParanoid:Q91VY5
OMA:QRTRPLI NextBio:371516 Bgee:Q91VY5 CleanEx:MM_JMJD2B
Genevestigator:Q91VY5 GermOnline:ENSMUSG00000024201 Uniprot:Q91VY5
Length = 1086
Score = 266 (98.7 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 70/219 (31%), Positives = 109/219 (49%)
Query: 312 GEYRRIIEN-----PT----EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGW 362
GEYRR+ + P +++E Y +NL TF S P S + + W
Sbjct: 96 GEYRRLANSEKYCTPRHQDFDDLERKYWKNL---TFVS--PIYGADISGSLYDDDVAQ-W 149
Query: 363 NLNNLPMLPGSLLSSESCKTC--NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPK 420
N+ NL + ++ E C T + P L+ GM T+ W E+ L S+ Y+H G PK
Sbjct: 150 NIGNLRTIL-DMVERE-CGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPK 207
Query: 421 IWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGE 480
W++IP + + + A + P S + + +SP LK G+P R TQ GE
Sbjct: 208 SWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGE 267
Query: 481 FVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIE 519
F++ F Y++GF+ GFNC+ES NFA + W+ +G+ A +
Sbjct: 268 FMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQ 306
Score = 88 (36.0 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKE-NDIWKSSKFVTQIQ 201
F PT +EF D +Y+A + + + G+ +I+PP WKP + +D+ + +
Sbjct: 18 FRPTMDEFRDFNRYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQVVT 77
Query: 202 QIDGLQNQYFSSKAA 216
GL QY K A
Sbjct: 78 GQSGLFTQYNIQKKA 92
>UNIPROTKB|F1SMN9 [details] [associations]
symbol:F1SMN9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 OMA:DIIQGER
EMBL:AEMK01181236 EMBL:AEMK01189766 EMBL:CU137711 EMBL:CU481460
EMBL:CU571047 Ensembl:ENSSSCT00000005730 Uniprot:F1SMN9
Length = 1057
Score = 263 (97.6 bits), Expect = 6.7e-23, Sum P(3) = 6.7e-23
Identities = 62/197 (31%), Positives = 101/197 (51%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
E++E Y +NL TF + P S + + + WN+ L + + E C
Sbjct: 117 EDLERKYWKNL---TFVA--PIYGADINGSIYDEGVDE-WNIARLNTVLDVV--EEECGI 168
Query: 383 C--NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKY 440
+ P L+ GM T+ W E+ L S+ Y+H G PK W++IP + + + A+ +
Sbjct: 169 SIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGF 228
Query: 441 LPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCS 500
P+ S + + +SPS LK G+P + TQ GEF++ F Y++GF+ GFNC+
Sbjct: 229 FPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCA 288
Query: 501 ESVNFAPIEWLPHGQNA 517
ES NFA + W+ +G+ A
Sbjct: 289 ESTNFATVRWIDYGKVA 305
Score = 89 (36.4 bits), Expect = 6.7e-23, Sum P(3) = 6.7e-23
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKP-PCLVKENDIWKSSKFVTQIQ 201
F P+ EEF + KY+A + K + G+ +++PP WKP C +++ + +
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQCYDDIDNLLIPAPIQQMVT 78
Query: 202 QIDGLQNQYFSSKAA 216
GL QY K A
Sbjct: 79 GQSGLFTQYNIQKKA 93
Score = 46 (21.3 bits), Expect = 6.7e-23, Sum P(3) = 6.7e-23
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 591 LCSSSQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCSPDIYSCLNHVK 640
L + S+S+ K F KR C++ L + L+ P S D + L + K
Sbjct: 627 LVNFSESEEFTKTFISIRKRHCDVVLCFI-LTPYEEPDSADNFHSLRYKK 675
>UNIPROTKB|Q9H3R0 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=IMP;IDA] [GO:0033169 "histone H3-K9
demethylation" evidence=IMP;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0050681 "androgen receptor binding" evidence=IPI]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0000790
GO:GO:0016702 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 Pathway_Interaction_DB:ar_pathway
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
EMBL:AB037901 EMBL:AB018323 EMBL:AK304032 EMBL:AL354707
EMBL:AL137020 EMBL:AL161443 EMBL:AL445592 EMBL:AL513412
EMBL:BC104859 EMBL:BC104861 EMBL:BC143571 IPI:IPI00027642
IPI:IPI00645825 IPI:IPI00878778 RefSeq:NP_001140166.1
RefSeq:NP_001140167.1 RefSeq:NP_001140168.1 RefSeq:NP_055876.2
UniGene:Hs.709425 PDB:2XDP PDB:2XML PDBsum:2XDP PDBsum:2XML
ProteinModelPortal:Q9H3R0 SMR:Q9H3R0 IntAct:Q9H3R0 STRING:Q9H3R0
PhosphoSite:Q9H3R0 DMDM:97536525 PaxDb:Q9H3R0 PRIDE:Q9H3R0
Ensembl:ENST00000381306 Ensembl:ENST00000381309
Ensembl:ENST00000420847 Ensembl:ENST00000543771 GeneID:23081
KEGG:hsa:23081 UCSC:uc003zkg.3 UCSC:uc003zkh.3 CTD:23081
GeneCards:GC09P006720 H-InvDB:HIX0017555 HGNC:HGNC:17071 MIM:605469
neXtProt:NX_Q9H3R0 PharmGKB:PA164721503 InParanoid:Q9H3R0
OMA:DIIQGER PhylomeDB:Q9H3R0 BindingDB:Q9H3R0 ChEMBL:CHEMBL6175
ChiTaRS:KDM4C EvolutionaryTrace:Q9H3R0 GenomeRNAi:23081
NextBio:44205 ArrayExpress:Q9H3R0 Bgee:Q9H3R0 CleanEx:HS_JMJD2C
Genevestigator:Q9H3R0 GermOnline:ENSG00000107077 Uniprot:Q9H3R0
Length = 1056
Score = 263 (97.6 bits), Expect = 7.6e-23, Sum P(2) = 7.6e-23
Identities = 62/197 (31%), Positives = 101/197 (51%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
E++E Y +NL TF + P S + + + WN+ L + + E C
Sbjct: 117 EDLERKYWKNL---TFVA--PIYGADINGSIYDEGVDE-WNIARLNTVLDVV--EEECGI 168
Query: 383 C--NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKY 440
+ P L+ GM T+ W E+ L S+ Y+H G PK W++IP + + + A+ +
Sbjct: 169 SIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGF 228
Query: 441 LPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCS 500
P+ S + + +SPS LK G+P + TQ GEF++ F Y++GF+ GFNC+
Sbjct: 229 FPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCA 288
Query: 501 ESVNFAPIEWLPHGQNA 517
ES NFA + W+ +G+ A
Sbjct: 289 ESTNFATVRWIDYGKVA 305
Score = 89 (36.4 bits), Expect = 7.6e-23, Sum P(2) = 7.6e-23
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKP-PCLVKENDIWKSSKFVTQIQ 201
F P+ EEF + KY+A + K + G+ +++PP WKP C +++ + +
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQCYDDIDNLLIPAPIQQMVT 78
Query: 202 QIDGLQNQYFSSKAA 216
GL QY K A
Sbjct: 79 GQSGLFTQYNIQKKA 93
>UNIPROTKB|F1PHR7 [details] [associations]
symbol:KDM4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AAEX03007833 EMBL:AAEX03007834 EMBL:AAEX03007835
Ensembl:ENSCAFT00000002249 Uniprot:F1PHR7
Length = 1053
Score = 263 (97.6 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 62/197 (31%), Positives = 101/197 (51%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
E++E Y +NL TF + P S + + + WN+ L + + E C
Sbjct: 117 EDLERKYWKNL---TFVA--PIYGADINGSIYDEDVDE-WNIARLNTVLDVV--EEECGI 168
Query: 383 C--NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKY 440
+ P L+ GM T+ W E+ L S+ Y+H G PK W++IP + + + A+ +
Sbjct: 169 SIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGF 228
Query: 441 LPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCS 500
P+ S + + +SPS LK G+P + TQ GEF++ F Y++GF+ GFNC+
Sbjct: 229 FPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCA 288
Query: 501 ESVNFAPIEWLPHGQNA 517
ES NFA + W+ +G+ A
Sbjct: 289 ESTNFATVRWIDYGKVA 305
Score = 88 (36.0 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKP-PCLVKENDIWKSSKFVTQIQ 201
F P+ EEF + KY+A + K + G+ +++PP WKP C +++ + +
Sbjct: 19 FRPSMEEFREFNKYLAFMESKGAHRAGLAKVIPPREWKPRQCYDDIDNLLIPAPIQQMVT 78
Query: 202 QIDGLQNQYFSSKAA 216
GL QY K A
Sbjct: 79 GQSGLFTQYNIQKKA 93
>MGI|MGI:1924054 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=ISO] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=ISO;IPI]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
MGI:MGI:1924054 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
GO:GO:0006357 GO:GO:0006351 GO:GO:0000790 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
CTD:23081 OMA:DIIQGER EMBL:AK173023 EMBL:AK053104 EMBL:AK081769
EMBL:AK144103 EMBL:BC020180 EMBL:BC042424 IPI:IPI00470006
RefSeq:NP_001165566.1 RefSeq:NP_659036.1 UniGene:Mm.209059
ProteinModelPortal:Q8VCD7 SMR:Q8VCD7 STRING:Q8VCD7
PhosphoSite:Q8VCD7 PRIDE:Q8VCD7 Ensembl:ENSMUST00000030102
Ensembl:ENSMUST00000077851 GeneID:76804 KEGG:mmu:76804
UCSC:uc008tjj.2 InParanoid:Q8VCD7 NextBio:345851 Bgee:Q8VCD7
CleanEx:MM_JMJD2C Genevestigator:Q8VCD7
GermOnline:ENSMUSG00000028397 Uniprot:Q8VCD7
Length = 1054
Score = 263 (97.6 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 62/197 (31%), Positives = 101/197 (51%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
E++E Y +NL TF + P S + + + WN+ L + + E C
Sbjct: 117 EDLERKYWKNL---TFVA--PIYGADINGSIYDEGVDE-WNIARLNTVLDVV--EEECGI 168
Query: 383 C--NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKY 440
+ P L+ GM T+ W E+ L S+ Y+H G PK W++IP + + + A+ +
Sbjct: 169 SIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGF 228
Query: 441 LPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCS 500
P+ S + + +SPS LK G+P + TQ GEF++ F Y++GF+ GFNC+
Sbjct: 229 FPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCA 288
Query: 501 ESVNFAPIEWLPHGQNA 517
ES NFA + W+ +G+ A
Sbjct: 289 ESTNFATVRWIDYGKVA 305
Score = 89 (36.4 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKP-PCLVKENDIWKSSKFVTQIQ 201
F P+ EEF + KY+A + K + G+ +++PP WKP C +++ + +
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQCYDDIDNLLIPAPIQQMVT 78
Query: 202 QIDGLQNQYFSSKAA 216
GL QY K A
Sbjct: 79 GQSGLFTQYNIQKKA 93
Score = 43 (20.2 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 566 VSGKDGILAKALKSRINSESNRRKYLCSSSQ 596
+SGK G ++ ++ + I E NR + S SQ
Sbjct: 449 LSGK-GCISSSVTAEIPPEDNRASAVISPSQ 478
>ZFIN|ZDB-GENE-070209-38 [details] [associations]
symbol:zgc:153957 "zgc:153957" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
ZFIN:ZDB-GENE-070209-38 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:CU468286 IPI:IPI00493629
Ensembl:ENSDART00000087729 ArrayExpress:F1QPD2 Bgee:F1QPD2
Uniprot:F1QPD2
Length = 1482
Score = 270 (100.1 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 67/200 (33%), Positives = 104/200 (52%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
E++E Y +NL TF S P + + + ++ WN+ +L + + E C
Sbjct: 117 EDLERKYWKNL---TFVS--PIYGADVSGTLYDEDIEE-WNIGHLNSVLDVI--EEDCGV 168
Query: 383 C--NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKY 440
+ P L+ GM TS W E+ L S+ Y+H G PK W++IP + + + A +
Sbjct: 169 SIQGVNTPYLYFGMWKTSFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGF 228
Query: 441 LPTLSFKQSKWHNRWVASL-SPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNC 499
P SFK + R +L SPS LK +P + TQ GEF++ F Y++GF+ GFNC
Sbjct: 229 FPN-SFKSCEAFLRHKMTLISPSVLKKYSIPFDKITQEAGEFMITFPYGYHAGFNHGFNC 287
Query: 500 SESVNFAPIEWLPHGQNAIE 519
+ES NFA I W+ +G+ A +
Sbjct: 288 AESTNFASIRWIDYGKLATQ 307
Score = 82 (33.9 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ--I 200
F PT EEF D +Y+ + + + G+ +++PP WKP +DI FV Q I
Sbjct: 19 FRPTMEEFKDFNQYLVYMESQGAHRAGLAKVIPPKGWKPRR--NYDDI---DDFVIQAPI 73
Query: 201 QQI----DGLQNQY 210
QQ+ GL QY
Sbjct: 74 QQMVAGQSGLFTQY 87
>TAIR|locus:504955644 [details] [associations]
symbol:REF6 "relative of early flowering 6"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=IMP] [GO:0035067 "negative regulation of histone
acetylation" evidence=IMP] [GO:0009741 "response to brassinosteroid
stimulus" evidence=IMP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0003676 GO:GO:0009826
GO:GO:0016702 Gene3D:3.30.160.60 GO:GO:0010228 GO:GO:0048366
GO:GO:0033169 GO:GO:0009741 GO:GO:0035067 EMBL:AL049659
InterPro:IPR003349 PROSITE:PS51183 HSSP:P08151 Pfam:PF02375
SMART:SM00545 EMBL:AY664499 IPI:IPI00537359 PIR:T06699
RefSeq:NP_680116.2 UniGene:At.3169 ProteinModelPortal:Q9STM3
SMR:Q9STM3 DIP:DIP-46006N IntAct:Q9STM3 PaxDb:Q9STM3 PRIDE:Q9STM3
EnsemblPlants:AT3G48430.1 GeneID:824002 KEGG:ath:AT3G48430
TAIR:At3g48430 eggNOG:NOG303077 HOGENOM:HOG000082763
InParanoid:Q9STM3 OMA:ELVINHE PhylomeDB:Q9STM3
ProtClustDB:CLSN2918915 Genevestigator:Q9STM3 Uniprot:Q9STM3
Length = 1360
Score = 253 (94.1 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 60/184 (32%), Positives = 92/184 (50%)
Query: 359 KSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGA 418
++ WN+ + GSLL + + P ++V M F+ W VE+H L SL Y+H+GA
Sbjct: 203 ETAWNMRAMSRAEGSLLKFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHMGA 262
Query: 419 PKIWHSIPQRYAVKFDAAAKKY-----L-PTLSFKQSKWHNRWVASLSPSPLKSEGVPVY 472
K W+ +P+ A+ F+ + + L P ++F +SP G+P
Sbjct: 263 GKTWYGVPKDAALAFEEVVRVHGYGEELNPLVTFSTL---GEKTTVMSPEVFVKAGIPCC 319
Query: 473 RCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISH 532
R Q+PGEFV+ F G+Y+SGF GFN E+ N A EWL ++A +SH
Sbjct: 320 RLVQNPGEFVVTFPGAYHSGFSHGFNFGEASNIATPEWLRMAKDAAIRRAAINYPPMVSH 379
Query: 533 DKLL 536
+LL
Sbjct: 380 LQLL 383
Score = 98 (39.6 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 138 LEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPP 176
L AP F PT EF D + YI + ++ YGIC+I+PP
Sbjct: 17 LPVAPEFRPTLAEFQDPIAYILKIEEEASRYGICKILPP 55
>RGD|1307528 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C" species:10116
"Rattus norvegicus" [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=ISO] [GO:0033169 "histone H3-K9
demethylation" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=ISO] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 RGD:1307528 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0000790 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0032454 IPI:IPI00959259
Ensembl:ENSRNOT00000009083 UCSC:RGD:1307528 ArrayExpress:F1LS62
Uniprot:F1LS62
Length = 1053
Score = 263 (97.6 bits), Expect = 8.9e-22, Sum P(3) = 8.9e-22
Identities = 62/197 (31%), Positives = 101/197 (51%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
E++E Y +NL TF + P S + + + WN+ L + + E C
Sbjct: 117 EDLERKYWKNL---TFVA--PIYGADINGSIYDEGVDE-WNIARLNTVLDVV--EEECGI 168
Query: 383 C--NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKY 440
+ P L+ GM T+ W E+ L S+ Y+H G PK W++IP + + + A+ +
Sbjct: 169 SIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGF 228
Query: 441 LPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCS 500
P+ S + + +SPS LK G+P + TQ GEF++ F Y++GF+ GFNC+
Sbjct: 229 FPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCA 288
Query: 501 ESVNFAPIEWLPHGQNA 517
ES NFA + W+ +G+ A
Sbjct: 289 ESTNFATVRWIDYGKVA 305
Score = 86 (35.3 bits), Expect = 8.9e-22, Sum P(3) = 8.9e-22
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKP-PCLVKENDIWKSSKFVTQIQ 201
F P+ EEF + KY+A + K + G+ +++PP WKP C +++ + +
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQCYDDIDNLLIPAPIQQMVT 78
Query: 202 QIDGLQNQY 210
GL QY
Sbjct: 79 GQSGLFTQY 87
Score = 38 (18.4 bits), Expect = 8.9e-22, Sum P(3) = 8.9e-22
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 551 SLVKKHTSD--NFMWRHVSGKDGILAKALK---SRINS---ESNR 587
S +KK SD F H++GK+ L K L+ +I S ESNR
Sbjct: 476 STLKK-ASDLIPFSHGHITGKESRLLKILQLESPKIPSSLAESNR 519
>RGD|1306378 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0014898 "cardiac
muscle hypertrophy in response to stress" evidence=ISO] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0035064 "methylated
histone residue binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA;ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
RGD:1306378 GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OrthoDB:EOG4QRH37 EMBL:CH474008 IPI:IPI00949993
RefSeq:NP_001101436.1 UniGene:Rn.95937 Ensembl:ENSRNOT00000066165
GeneID:313539 KEGG:rno:313539 UCSC:RGD:1306378 NextBio:666373
Uniprot:D4A2N4
Length = 971
Score = 281 (104.0 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 64/197 (32%), Positives = 102/197 (51%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
EE+E Y +NL TF P + +++++ WN+ L + L+ ES T
Sbjct: 24 EELERKYWKNL---TFNP--PIYGADVNGTLYEQHVDE-WNIGRLKTIL-DLVEKESGIT 76
Query: 383 CN-LLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYL 441
+ P L+ GM TS W E+ L S+ Y+H G PK W+S+P + + + AK +
Sbjct: 77 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFF 136
Query: 442 PTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSE 501
P + + + +SP LK G+P + TQ GEF++ F Y++GF+ GFNC+E
Sbjct: 137 PGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAE 196
Query: 502 SVNFAPIEWLPHGQNAI 518
S NFA W+ +G+ A+
Sbjct: 197 STNFATRRWIEYGKQAV 213
Score = 58 (25.5 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 660 ELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRPNSQAEES 705
+L+V E+VEG+L V+ +K L S SS+D + +S+ ES
Sbjct: 395 DLSVNPESVEGRL--VFSGSKKKASSSLGSSSSQDSVSSDSETTES 438
>ZFIN|ZDB-GENE-120215-3 [details] [associations]
symbol:si:ch211-215f22.3 "si:ch211-215f22.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-120215-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX119315 RefSeq:XP_001921829.2
Ensembl:ENSDART00000151359 GeneID:100003413 KEGG:dre:100003413
Bgee:I3ITH4 Uniprot:I3ITH4
Length = 2012
Score = 249 (92.7 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 50/157 (31%), Positives = 84/157 (53%)
Query: 362 WNLNNLPMLPGSLLSSESCKTCN-LLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPK 420
WN+ L + ++ ES T + P L+ GM ++ W E+ L S+ Y+H G PK
Sbjct: 151 WNIGRLNTIL-DMVERESGITIKGVNTPYLYFGMWKSTFAWHTEDMDLYSINYLHFGEPK 209
Query: 421 IWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGE 480
W+ +P + + + AK + P + + + +SPS L+ G+P + TQ G+
Sbjct: 210 SWYVVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPSILRKYGIPFEKVTQEAGQ 269
Query: 481 FVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNA 517
F++ F Y++GF+ GFNC+ES NFA W+ +G+ A
Sbjct: 270 FIVTFPYGYHAGFNHGFNCAESTNFATQRWIDYGKLA 306
Score = 99 (39.9 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQIQQ 202
F+PT+EEF D +YIA + + + G+ ++VPP WKP +DI + T IQQ
Sbjct: 20 FHPTKEEFKDFNRYIAYMESQGAHRAGMAKVVPPKDWKPRRTY--DDI-EDLVIPTPIQQ 76
Query: 203 I----DGLQNQY 210
+ GL QY
Sbjct: 77 VVTGQSGLFTQY 88
>SGD|S000000971 [details] [associations]
symbol:RPH1 "JmjC domain-containing histone demethylase"
species:4932 "Saccharomyces cerevisiae" [GO:0001078 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IMP;IDA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0043565
"sequence-specific DNA binding" evidence=IMP;IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=IMP;IDA] [GO:0032454 "histone
demethylase activity (H3-K9 specific)" evidence=IDA] [GO:0016577
"histone demethylation" evidence=IMP;IDA] Pfam:PF00096
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 SGD:S000000971
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0043565
GO:GO:0008270 EMBL:BK006939 eggNOG:COG5048 Gene3D:3.30.160.60
EMBL:U18922 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000112726
OrthoDB:EOG4NGKW6 GO:GO:0051864 GO:GO:0032454 PIR:S50672
RefSeq:NP_011096.1 PDB:3OPT PDB:3OPW PDBsum:3OPT PDBsum:3OPW
ProteinModelPortal:P39956 SMR:P39956 DIP:DIP-5418N IntAct:P39956
MINT:MINT-518485 STRING:P39956 PaxDb:P39956 PeptideAtlas:P39956
EnsemblFungi:YER169W GeneID:856916 KEGG:sce:YER169W CYGD:YER169w
OMA:EFLRHKM EvolutionaryTrace:P39956 NextBio:983368
Genevestigator:P39956 GermOnline:YER169W Uniprot:P39956
Length = 796
Score = 228 (85.3 bits), Expect = 9.6e-21, Sum P(3) = 9.6e-21
Identities = 54/159 (33%), Positives = 84/159 (52%)
Query: 361 GWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPK 420
G N+ N+ LP ++L K + L+ G+ S W +E+ L S+ Y+H GAPK
Sbjct: 195 GLNVWNVAKLP-NILDHMETKVPGVNDSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPK 253
Query: 421 IWHSIPQRYAVKFDAAAKKYLPTLSFKQSKW--HNRWVASLSPSPLKSEGVPVYRCTQSP 478
W+SIPQ KF ++ P + ++ H ++AS P L+ G+
Sbjct: 254 QWYSIPQEDRFKFYKFMQEQFPEEAKNCPEFLRHKMFLAS--PKLLQENGIRCNEIVHHE 311
Query: 479 GEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNA 517
GEF++ + Y++GF+ G+N +ESVNFA EWLP G+ A
Sbjct: 312 GEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKKA 350
Score = 99 (39.9 bits), Expect = 9.6e-21, Sum P(3) = 9.6e-21
Identities = 23/93 (24%), Positives = 44/93 (47%)
Query: 133 AKNDVLEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWK 192
A ++++ PVF PT E+F D Y ++ + G+ +++PP WK D+
Sbjct: 6 APSEIVGGVPVFKPTYEQFEDFYAYCKAINKYGMKSGVVKVIPPKEWKDKL-----DLPY 60
Query: 193 SSKFVTQIQQIDGLQNQYFSSKAAKIYDNVNSN 225
S++ + +I+ +Q +K + NV N
Sbjct: 61 SAETLQKIKIKSPIQQHISGNKGLFMVQNVEKN 93
Score = 47 (21.6 bits), Expect = 9.6e-21, Sum P(3) = 9.6e-21
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 505 FAPIEWLPHGQNAIELYREQGRKTSISH 532
FAP E + G+N I + +E RK S H
Sbjct: 695 FAPEEIVLSGKNKIYICKECQRKFSSGH 722
>UNIPROTKB|F1N9S1 [details] [associations]
symbol:F1N9S1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AADN02066264 EMBL:AADN02066265 EMBL:AADN02066266
EMBL:AADN02066267 EMBL:AADN02066268 EMBL:AADN02066269
EMBL:AADN02066270 EMBL:AADN02066271 EMBL:AADN02066272
EMBL:AADN02066273 EMBL:AADN02066274 EMBL:AADN02066275
EMBL:AADN02066276 EMBL:AADN02066277 EMBL:AADN02066278
EMBL:AADN02066279 EMBL:AADN02066280 EMBL:AADN02066281
EMBL:AADN02066282 EMBL:AADN02066283 IPI:IPI00679881
Ensembl:ENSGALT00000032836 Uniprot:F1N9S1
Length = 998
Score = 276 (102.2 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 64/197 (32%), Positives = 104/197 (52%)
Query: 323 EEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKT 382
E++E Y +NL TF + P S + K ++ WN+ +L + + E C
Sbjct: 61 EDLERKYWKNL---TFVA--PIYGADINGSIYDKGIEE-WNIAHLNTILDVV--GEDCGI 112
Query: 383 C--NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKY 440
+ P L+ GM T+ W E+ L S+ Y+H G PK W++IP + + + A+ +
Sbjct: 113 SIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGF 172
Query: 441 LPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCS 500
P+ S + + + +SPS LK G+P + TQ GEF++ F Y++GF+ GFNC+
Sbjct: 173 FPSSSHGCNAFLRHKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCA 232
Query: 501 ESVNFAPIEWLPHGQNA 517
ES NFA I W+ +G+ A
Sbjct: 233 ESTNFATIRWIDYGKAA 249
>UNIPROTKB|F5H590 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347 Pfam:PF01388
Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AL136162 EMBL:AL021938 HGNC:HGNC:6196
IPI:IPI01018952 ProteinModelPortal:F5H590 SMR:F5H590 PRIDE:F5H590
Ensembl:ENST00000541660 UCSC:uc011diu.1 ArrayExpress:F5H590
Bgee:F5H590 Uniprot:F5H590
Length = 960
Score = 173 (66.0 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 138 LEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFV 197
++E PV P+ +EF D L YI SVR + E++G+CR++PPP W+P C K ND +FV
Sbjct: 516 MDEIPVLRPSAKEFHDPLIYIESVRAQVEKFGMCRVIPPPDWRPEC--KLND---EMRFV 570
Query: 198 TQIQQIDGLQNQY 210
TQIQ I L ++
Sbjct: 571 TQIQHIHKLGRRW 583
Score = 149 (57.5 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 57/203 (28%), Positives = 92/203 (45%)
Query: 235 GLQNGVGG-NGCTMNLDE---ARCTEG----FESERGPEFTLETFKKYADDFKEQYFCTK 286
GL +GV NG L E A+ G F E+ E K +DF + + +
Sbjct: 721 GLIHGVAPRNGFRSKLKEVGQAQLKTGRRRLFAQEKEVVKEEEEDKGVLNDFHKCIYKGR 780
Query: 287 NIDMTV----DENPLVFKKQGEPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGF 342
++ +T N + EP+ IE EY R++E + V G+ ++T T GSGF
Sbjct: 781 SVSLTTFYRTARNIMSMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGF 839
Query: 343 PTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWK 402
P + + + + GWNL LP GS+L + +P L++GM F++ W
Sbjct: 840 PVGKS-------EPFSRHGWNLTVLPNNTGSILRHLGAVP-GVTIPWLNIGMVFSTSCWS 891
Query: 403 VEEHCLCSLYYMHLGAPKIWHSI 425
+++ L + Y+H GA I S+
Sbjct: 892 RDQNHLPYIDYLHTGADCICLSV 914
>ASPGD|ASPL0000057825 [details] [associations]
symbol:AN1060 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR017956 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00384 SMART:SM00558 GO:GO:0005634
EMBL:BN001308 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0008168 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
EnsemblFungi:CADANIAT00001580 HOGENOM:HOG000206472 OMA:NIEKQRS
Uniprot:C8VTU6
Length = 1405
Score = 263 (97.6 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 89/332 (26%), Positives = 161/332 (48%)
Query: 300 KKQGE-PSLENIEGE-YR----RIIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASD 353
+KQ + ++E+++ E Y+ RI +N E+ E LET + S +NP +D
Sbjct: 285 RKQNKGDTVEHVDEEAYKNFDYRIHDN--EDYTPERCEELETAYWKSLM--FNNPMYGAD 340
Query: 354 HQKYLK----SGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLC 409
L + WN+ LP +LL K + L++GM + W +E+ L
Sbjct: 341 MPGSLFDDRITSWNVAKLP----NLLDVIGQKVPGVNTAYLYLGMWKATFAWHLEDVDLY 396
Query: 410 SLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSE-G 468
S+ Y+H GAPK W+SI Q A +F+ A K P+ + ++ +SPS LKS+ G
Sbjct: 397 SINYIHFGAPKQWYSISQEDAPRFEQAMKSIWPSDAKTCDQFLRHKTYLVSPSLLKSQYG 456
Query: 469 VPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKT 528
+ V + GEFV+ + Y+SG++ G+NC+ESVNFA +WL +G+ A +K
Sbjct: 457 ITVNKMVHYEGEFVITYPYGYHSGYNLGYNCAESVNFATEKWLDYGRVA--------KKC 508
Query: 529 SISHDKLLLGAAREVVKTQWEISLVKKHTSDNFMWRHVSGKDGILA-KALKSRINSESNR 587
+ D + + K + E++ D+ + + + D + +++ + ++ +
Sbjct: 509 NCEADSVWIDVEEIERKLRGELTPEYYGEYDSDLDGYEAASDLLTPPRSVPEKTSNRGRK 568
Query: 588 RKYLCSSSQSQRMDKNFDYTSKRECNICLYDL 619
RK+ ++++RM + + C +C DL
Sbjct: 569 RKHDGDMNKAKRMRADMGIPRRLPCLLCPNDL 600
Score = 59 (25.8 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 142 PVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWK---PP 182
PVF P + F +K I ++S G+ +++PP W+ PP
Sbjct: 81 PVFKPFRD-FQSFIKRIDKYGMRS---GVVKVIPPKEWRDALPP 120
>UNIPROTKB|Q9U297 [details] [associations]
symbol:jmjd-2 "Lysine-specific demethylase 4" species:6239
"Caenorhabditis elegans" [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016702
EMBL:AL110490 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 GO:GO:0051864
eggNOG:NOG317950 KO:K06709 PIR:T27007 RefSeq:NP_496969.2
ProteinModelPortal:Q9U297 SMR:Q9U297 DIP:DIP-26971N
MINT:MINT-1077527 STRING:Q9U297 PaxDb:Q9U297
EnsemblMetazoa:Y48B6A.11 GeneID:175080 KEGG:cel:CELE_Y48B6A.11
UCSC:Y48B6A.11 CTD:175080 WormBase:Y48B6A.11 HOGENOM:HOG000021888
InParanoid:Q9U297 OMA:SSEHADR NextBio:886668 Uniprot:Q9U297
Length = 922
Score = 228 (85.3 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 70/267 (26%), Positives = 123/267 (46%)
Query: 264 PEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIE-GEYRRIIE--- 319
P T + F DD++ + I+ T E P + K+ + E+R +
Sbjct: 129 PRPTRKDFSD-VDDYEITQPARETIEAT--EKPGAYFKRNVTCRRKMPVREFRTLANSAQ 185
Query: 320 --NPTEEIEVLYGENLETGTFGS---GFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSL 374
NP +++ G +E F + G P E S + ++ WN+N L G++
Sbjct: 186 YRNPRPDLK---GSEIEKHYFDNILHGEPIYGADTEGSFYDAQVEE-WNMNRL----GTI 237
Query: 375 LSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFD 434
L + + + L+ GM T+ W E+ L S+ ++H GAPK W +I +A +F+
Sbjct: 238 LEDTNYEIKGVNTVYLYFGMYKTTFPWHAEDMDLYSINFLHFGAPKYWFAISSEHADRFE 297
Query: 435 A-AAKKYLPTLSFK-QSKWHNRWVASL-SPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYS 491
++++ + Q K R L +P L+ G+P Q P EF++ F Y+
Sbjct: 298 RFMSQQFSYQNEYAPQCKAFLRHKTYLVTPELLRQAGIPYATMVQRPNEFIITFPRGYHM 357
Query: 492 GFDCGFNCSESVNFAPIEWLPHGQNAI 518
GF+ G+N +ES NFA W+ +G++A+
Sbjct: 358 GFNLGYNLAESTNFASQRWIDYGKDAV 384
Score = 73 (30.8 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEY--GICRIVPPPSWKP 181
E FYPT EF + +YI + GI +IV P W P
Sbjct: 86 EVLTFYPTMREFKNFSQYIKKIEQNGGHLKAGIAKIVAPEGWTP 129
>UNIPROTKB|F5GYH2 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL354707 EMBL:AL137020
EMBL:AL161443 EMBL:AL445592 EMBL:AL513412 HGNC:HGNC:17071
ChiTaRS:KDM4C IPI:IPI01018984 ProteinModelPortal:F5GYH2 SMR:F5GYH2
Ensembl:ENST00000536108 ArrayExpress:F5GYH2 Bgee:F5GYH2
Uniprot:F5GYH2
Length = 629
Score = 244 (91.0 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 44/121 (36%), Positives = 71/121 (58%)
Query: 397 TSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWV 456
T+ W E+ L S+ Y+H G PK W++IP + + + A+ + P+ S + +
Sbjct: 4 TTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKM 63
Query: 457 ASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQN 516
+SPS LK G+P + TQ GEF++ F Y++GF+ GFNC+ES NFA + W+ +G+
Sbjct: 64 TLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKV 123
Query: 517 A 517
A
Sbjct: 124 A 124
>UNIPROTKB|E7EV17 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
EMBL:AL354707 EMBL:AL137020 EMBL:AL161443 EMBL:AL445592
EMBL:AL513412 HGNC:HGNC:17071 ChiTaRS:KDM4C IPI:IPI00910024
ProteinModelPortal:E7EV17 SMR:E7EV17 Ensembl:ENST00000442236
UCSC:uc011lmk.2 ArrayExpress:E7EV17 Bgee:E7EV17 Uniprot:E7EV17
Length = 801
Score = 244 (91.0 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 44/121 (36%), Positives = 71/121 (58%)
Query: 397 TSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWV 456
T+ W E+ L S+ Y+H G PK W++IP + + + A+ + P+ S + +
Sbjct: 4 TTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKM 63
Query: 457 ASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQN 516
+SPS LK G+P + TQ GEF++ F Y++GF+ GFNC+ES NFA + W+ +G+
Sbjct: 64 TLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKV 123
Query: 517 A 517
A
Sbjct: 124 A 124
>CGD|CAL0004229 [details] [associations]
symbol:orf19.2743 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016577 "histone demethylation" evidence=IEA] [GO:0051864
"histone demethylase activity (H3-K36 specific)" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0032454 "histone demethylase activity (H3-K9 specific)"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 CGD:CAL0004229 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 RefSeq:XP_720493.1
ProteinModelPortal:Q5AFV0 GeneID:3637916 KEGG:cal:CaO19.2743
Uniprot:Q5AFV0
Length = 606
Score = 210 (79.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 52/157 (33%), Positives = 79/157 (50%)
Query: 360 SGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAP 419
+ WN+ +LP L L E N L+ G+ S W +E+ L S+ Y+H GAP
Sbjct: 184 TAWNVAHLPNLLD--LMEEKLPGVNQAY--LYAGLWKASFAWHLEDQDLYSINYLHFGAP 239
Query: 420 KIWHSIPQRYAVKFDAAAKKYLPTLSFKQ-SKWHNRWVASLSPSPLKSEGVPVYRCTQSP 478
K W+SIPQ +F A FKQ S++ +SP+ L+ G+ V
Sbjct: 240 KQWYSIPQSQHEEFYALMVDLFHD-EFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHRE 298
Query: 479 GEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQ 515
GEF++ + Y++GF+ +N +ESVNFA +W G+
Sbjct: 299 GEFIITYPYGYHAGFNYDYNLAESVNFALDDWFEFGK 335
Score = 78 (32.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 123 KVTARWSPEGAKNDVLEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSW 179
K T P N V PVF PT EF D + ++ + GI +++PP W
Sbjct: 8 KTTLHIEPSYYDNGV----PVFQPTMHEFRDFYNFNKAINKYGMQSGIVKVIPPTQW 60
>UNIPROTKB|Q5AFV0 [details] [associations]
symbol:RPH1 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004229 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 RefSeq:XP_720493.1 ProteinModelPortal:Q5AFV0
GeneID:3637916 KEGG:cal:CaO19.2743 Uniprot:Q5AFV0
Length = 606
Score = 210 (79.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 52/157 (33%), Positives = 79/157 (50%)
Query: 360 SGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAP 419
+ WN+ +LP L L E N L+ G+ S W +E+ L S+ Y+H GAP
Sbjct: 184 TAWNVAHLPNLLD--LMEEKLPGVNQAY--LYAGLWKASFAWHLEDQDLYSINYLHFGAP 239
Query: 420 KIWHSIPQRYAVKFDAAAKKYLPTLSFKQ-SKWHNRWVASLSPSPLKSEGVPVYRCTQSP 478
K W+SIPQ +F A FKQ S++ +SP+ L+ G+ V
Sbjct: 240 KQWYSIPQSQHEEFYALMVDLFHD-EFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHRE 298
Query: 479 GEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQ 515
GEF++ + Y++GF+ +N +ESVNFA +W G+
Sbjct: 299 GEFIITYPYGYHAGFNYDYNLAESVNFALDDWFEFGK 335
Score = 78 (32.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 123 KVTARWSPEGAKNDVLEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSW 179
K T P N V PVF PT EF D + ++ + GI +++PP W
Sbjct: 8 KTTLHIEPSYYDNGV----PVFQPTMHEFRDFYNFNKAINKYGMQSGIVKVIPPTQW 60
>FB|FBgn0033233 [details] [associations]
symbol:Kdm4A "Histone demethylase 4A" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0016577 "histone demethylation" evidence=ISS] [GO:0051864
"histone demethylase activity (H3-K36 specific)"
evidence=ISS;IDA;IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IMP] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:AE013599 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0006351 GO:GO:0016702 GO:GO:0010628
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 EMBL:AY058636 RefSeq:NP_610331.1 UniGene:Dm.4139
ProteinModelPortal:Q9V333 SMR:Q9V333 MINT:MINT-800097 STRING:Q9V333
PaxDb:Q9V333 PRIDE:Q9V333 EnsemblMetazoa:FBtr0088886 GeneID:35744
KEGG:dme:Dmel_CG15835 UCSC:CG15835-RA CTD:9682 FlyBase:FBgn0033233
InParanoid:Q9V333 OMA:FASKRWI OrthoDB:EOG46T1GM PhylomeDB:Q9V333
GenomeRNAi:35744 NextBio:795007 Bgee:Q9V333 GermOnline:CG15835
Uniprot:Q9V333
Length = 495
Score = 222 (83.2 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 46/157 (29%), Positives = 81/157 (51%)
Query: 362 WNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKI 421
WN+ L + + + + + L+ GM +S W E+ L S+ Y+H GAPK
Sbjct: 155 WNIGRLDTILNLVNTDYNIIIDGVNTAYLYFGMWKSSFAWHTEDMDLYSINYLHFGAPKT 214
Query: 422 WHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRW-VASLSPSPLKSEGVPVYRCTQSPGE 480
W++IP Y + + A + ++++ + R + +SP L+ +P + TQ GE
Sbjct: 215 WYAIPPAYGRRLEKLANETFSE-NYQECNAYLRHKMTMISPKVLRQHNIPYNKITQEAGE 273
Query: 481 FVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNA 517
++ F Y++GF+ GFN +ES NFA W+ +G+ A
Sbjct: 274 IMITFPFGYHAGFNHGFNGAESTNFASKRWIEYGKRA 310
Score = 63 (27.2 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 144 FYPTEEEFSDTLKYIASVRLKSEEY-GICRIVPPPSWKP 181
F P+ EEF + YI + + G+ +I PP W P
Sbjct: 21 FRPSYEEFQNFSAYIEYIESRGAHLAGLAKIQPPAEWVP 59
Score = 38 (18.4 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 687 LHSYSSRDGLRPNSQAEESKQ 707
L+ Y ++ LR EES Q
Sbjct: 363 LNEYEKQENLRAAKSEEESPQ 383
>UNIPROTKB|C9JGA3 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016
PROSITE:PS51011 SMART:SM00249 SMART:SM00501 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D
IPI:IPI00644852 ProteinModelPortal:C9JGA3 SMR:C9JGA3 STRING:C9JGA3
Ensembl:ENST00000447300 HOGENOM:HOG000174636 ArrayExpress:C9JGA3
Bgee:C9JGA3 Uniprot:C9JGA3
Length = 425
Score = 147 (56.8 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 39/113 (34%), Positives = 60/113 (53%)
Query: 257 GFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRR 316
GFE + E++L++F + AD FK YF +M V P E +E E+ R
Sbjct: 329 GFE-QATQEYSLQSFGEMADSFKSDYF-----NMPVHMVPT----------ELVEKEFWR 372
Query: 317 IIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQK-YLKSGWNLNNLP 368
++ + E++ V YG ++ + FGSGFP ++ S +K Y SGWNLN +P
Sbjct: 373 LVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMP 425
Score = 139 (54.0 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EF D L YIA +R +E+ GIC+I PP W+PP V+ ++ +F +
Sbjct: 13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNF----RFTPR 68
Query: 200 IQQIDGLQNQ 209
+Q+++ L+ Q
Sbjct: 69 VQRLNELEAQ 78
>CGD|CAL0004209 [details] [associations]
symbol:orf19.2730 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0004209
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023
EMBL:AACQ01000025 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
eggNOG:NOG317950 RefSeq:XP_720249.1 RefSeq:XP_720480.1
ProteinModelPortal:Q5AF79 GeneID:3637861 GeneID:3638072
KEGG:cal:CaO19.10244 KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 204 (76.9 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 51/157 (32%), Positives = 78/157 (49%)
Query: 360 SGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAP 419
+ WN+ +LP L L E N L+ G+ W +E+ L S+ Y+H GAP
Sbjct: 184 TAWNVAHLPNLLD--LMEEKLPGVNQAY--LYAGLWKALFAWHLEDQDLYSINYLHFGAP 239
Query: 420 KIWHSIPQRYAVKFDAAAKKYLPTLSFKQ-SKWHNRWVASLSPSPLKSEGVPVYRCTQSP 478
K W+SIPQ +F A FKQ S++ +SP+ L+ G+ V
Sbjct: 240 KQWYSIPQSQHEEFYALMVDLFHD-EFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHRE 298
Query: 479 GEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQ 515
GEF++ + Y++GF+ +N +ESVNFA +W G+
Sbjct: 299 GEFIITYPYGYHAGFNYDYNLAESVNFALDDWFEFGK 335
Score = 77 (32.2 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 123 KVTARWSPEGAKNDVLEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSW 179
K T P N V PVF PT EF D + ++ + GI +++PP W
Sbjct: 8 KTTLHIEPSYFDNGV----PVFQPTMHEFRDFYNFNKAINNYGMQSGIVKVIPPTQW 60
>UNIPROTKB|Q5AF79 [details] [associations]
symbol:RPH2 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004209 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 EMBL:AACQ01000025
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG317950
RefSeq:XP_720249.1 RefSeq:XP_720480.1 ProteinModelPortal:Q5AF79
GeneID:3637861 GeneID:3638072 KEGG:cal:CaO19.10244
KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 204 (76.9 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 51/157 (32%), Positives = 78/157 (49%)
Query: 360 SGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAP 419
+ WN+ +LP L L E N L+ G+ W +E+ L S+ Y+H GAP
Sbjct: 184 TAWNVAHLPNLLD--LMEEKLPGVNQAY--LYAGLWKALFAWHLEDQDLYSINYLHFGAP 239
Query: 420 KIWHSIPQRYAVKFDAAAKKYLPTLSFKQ-SKWHNRWVASLSPSPLKSEGVPVYRCTQSP 478
K W+SIPQ +F A FKQ S++ +SP+ L+ G+ V
Sbjct: 240 KQWYSIPQSQHEEFYALMVDLFHD-EFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHRE 298
Query: 479 GEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQ 515
GEF++ + Y++GF+ +N +ESVNFA +W G+
Sbjct: 299 GEFIITYPYGYHAGFNYDYNLAESVNFALDDWFEFGK 335
Score = 77 (32.2 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 123 KVTARWSPEGAKNDVLEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSW 179
K T P N V PVF PT EF D + ++ + GI +++PP W
Sbjct: 8 KTTLHIEPSYFDNGV----PVFQPTMHEFRDFYNFNKAINNYGMQSGIVKVIPPTQW 60
>POMBASE|SPAC343.11c [details] [associations]
symbol:msc1 "multi-copy suppressor of Chk1" species:4896
"Schizosaccharomyces pombe" [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0000812 "Swr1 complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISM] [GO:0006974 "response to DNA damage
stimulus" evidence=IGI] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=ISM] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0019787 "small
conjugating protein ligase activity" evidence=ISM] [GO:0032452
"histone demethylase activity" evidence=ISM] [GO:0043486 "histone
exchange" evidence=IPI] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 PomBase:SPAC343.11c
GO:GO:0007126 EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0016573 GO:GO:0006974
GO:GO:0016706 GO:GO:0000812 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0019787 GO:GO:0000118 OrthoDB:EOG4Z39NV
InterPro:IPR003349 PROSITE:PS51183 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032452 PIR:T38660 RefSeq:NP_593431.1
ProteinModelPortal:Q9UT79 STRING:Q9UT79 EnsemblFungi:SPAC343.11c.1
GeneID:2541710 KEGG:spo:SPAC343.11c NextBio:20802802 Uniprot:Q9UT79
Length = 1588
Score = 216 (81.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 69/233 (29%), Positives = 101/233 (43%)
Query: 329 YGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVP 388
Y E+L T G T + P S Y WNL + S LS +L
Sbjct: 457 YPESLPTPLLGRAVNTTAFP--TSRQNAYYNDPWNLYFIHF---SKLSPLRFTPPGILTS 511
Query: 389 RLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQ 448
+ +G T W+ + L ++Y H GA +IW+ IP+ K++ P SF Q
Sbjct: 512 TISLGQPLTCQGWQRDSMSLFGMHYHHYGAQRIWYVIPEVDGPKYEKLLNDLSP--SFIQ 569
Query: 449 SKWHNRWVAS-LSP-SPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFA 506
K + L P S L S G+ V Q+ EFV+ +YY+ D GF+ SESV FA
Sbjct: 570 EKPETLIKSKILLPISMLISNGIQVLTFVQNSNEFVITSPNTYYTVLDTGFSLSESVPFA 629
Query: 507 PIEWLP--HGQNAIELYREQGRKTSISHDKLLLGAA---REVVKTQWEISLVK 554
EW+ H +N+ +Y+ S D +LL A + V W ++ +K
Sbjct: 630 TKEWIQDMHAENSFNMYKNLHISAPFSLDHILLANATLDKTVHSAYWLMTCLK 682
Score = 72 (30.4 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 146 PTEEEFSDTLKYIASVRLKS-EEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
P +EEFS L +I+ + ++ + G R++PP +WK P + KF+T+
Sbjct: 87 PKKEEFSRGLDFISDLYDQTARKSGAVRVIPPDNWKCPLTINTTTF----KFLTR 137
>SGD|S000002503 [details] [associations]
symbol:GIS1 "Histone demethylase and transcription factor"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0071071 "regulation of phospholipid biosynthetic
process" evidence=IMP] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IC] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0060275 "maintenance of stationary phase
in response to starvation" evidence=IMP] [GO:0001300 "chronological
cell aging" evidence=IMP] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA;IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0016577 "histone
demethylation" evidence=IMP] [GO:0051864 "histone demethylase
activity (H3-K36 specific)" evidence=IMP] InterPro:IPR003347
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51184
SMART:SM00355 SMART:SM00558 SGD:S000002503 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0008270
EMBL:BK006938 GO:GO:0001300 GO:GO:0000978 GO:GO:0001077
eggNOG:COG5048 Gene3D:3.30.160.60 EMBL:Z47746 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 PIR:S51245
RefSeq:NP_010381.1 ProteinModelPortal:Q03833 SMR:Q03833
IntAct:Q03833 MINT:MINT-4480789 STRING:Q03833 PaxDb:Q03833
PeptideAtlas:Q03833 EnsemblFungi:YDR096W GeneID:851670
KEGG:sce:YDR096W CYGD:YDR096w GeneTree:ENSGT00530000063342
HOGENOM:HOG000112726 OrthoDB:EOG4NGKW6 NextBio:969289
Genevestigator:Q03833 GermOnline:YDR096W GO:GO:0051864
GO:GO:0060275 GO:GO:0071071 Uniprot:Q03833
Length = 894
Score = 172 (65.6 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 55/183 (30%), Positives = 81/183 (44%)
Query: 324 EIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTC 383
++++L + +T F F V E S Y + WNLNNLP +S +
Sbjct: 141 QLQILESDFWKTIAFSKPFYAVD---ENSSIFPYDLTLWNLNNLP---------DSINSS 188
Query: 384 NLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPT 443
N RL G W ++E CS+ Y+H GAPK W+SIP +F K P+
Sbjct: 189 NR---RLLTGQSKCIFPWHLDEQNKCSINYLHFGAPKQWYSIPSANTDQFLKILSKE-PS 244
Query: 444 LSFKQSKWHNRWVASL-SPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSES 502
+ + R + SP L+ + R Q EF++ F YSGF+ G+N ES
Sbjct: 245 SNKENCPAFIRHQNIITSPDFLRKNNIKFNRVVQFQHEFIITFPYCMYSGFNYGYNFGES 304
Query: 503 VNF 505
+ F
Sbjct: 305 IEF 307
Score = 144 (55.7 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 64/252 (25%), Positives = 102/252 (40%)
Query: 366 NLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSI 425
NL LP S+ SS RL G W ++E CS+ Y+H GAPK W+SI
Sbjct: 177 NLNNLPDSINSSNR---------RLLTGQSKCIFPWHLDEQNKCSINYLHFGAPKQWYSI 227
Query: 426 PQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASL-SPSPLKSEGVPVYRCTQSPGEFVLV 484
P +F K P+ + + R + SP L+ + R Q EF++
Sbjct: 228 PSANTDQFLKILSKE-PSSNKENCPAFIRHQNIITSPDFLRKNNIKFNRVVQFQHEFIIT 286
Query: 485 FSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDK--LLLGAARE 542
F YSGF+ G+N ES+ F ++ Q A+ R+Q K + K G
Sbjct: 287 FPYCMYSGFNYGYNFGESIEFI-LD-----QQAV--VRKQPLKCGCGNKKEERKSGPFSN 338
Query: 543 VVKTQWEISLVKKHT-SDNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSSSQSQRMD 601
+ E T +DN +++ V D +L + + N E N+ + + ++
Sbjct: 339 LSYDSNESEQRGSITDNDNDLFQKVRSFDELLNHSSQELQNLEDNKNPLFSNINMNRPQS 398
Query: 602 KNFDYTSKRECN 613
+ T+ N
Sbjct: 399 SSLRSTTPNGVN 410
Score = 94 (38.1 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 43/171 (25%), Positives = 74/171 (43%)
Query: 136 DVLEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSW------KPPCLVKEND 189
+V++ PVF P+ EF++ +I + E GI +++PP W PP +
Sbjct: 7 EVIDGVPVFKPSMMEFANFQYFIDEITKFGIENGIVKVIPPKEWLELLEGSPPAESLKT- 65
Query: 190 IWKSSKFVTQIQQIDGLQNQYFSSKAAKIYDNVNSNSKRRRSLNTGLQNGVG-GNGCTMN 248
I S Q ++ D +N FS + YDN + N + ++L L + + G+
Sbjct: 66 IQLDSPIQQQAKRWDKHENGVFSIENE--YDNKSYNLTQWKNLAESLDSRISQGDFNDKT 123
Query: 249 LDEARCTEGFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDENPLVF 299
L E C +S++ + L + DF + +K VDEN +F
Sbjct: 124 LKE-NCR--VDSQQDC-YDLAQLQILESDFWKTIAFSKPF-YAVDENSSIF 169
Score = 45 (20.9 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 652 FLFRYEISELNVLLEAVEGKLSAV---YR--WAKDDLKMY---LHSYSSRDGLRPNS 700
FL R + LN+ EA + +S+ YR + MY ++ YS+ G+R NS
Sbjct: 678 FLKRNNVVTLNISREASKSPISSFVNDYRSPLGVSNPLMYSSTINDYSNGTGIRQNS 734
>UNIPROTKB|I3LQ64 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 Ensembl:ENSSSCT00000031638
Uniprot:I3LQ64
Length = 911
Score = 158 (60.7 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 34/106 (32%), Positives = 52/106 (49%)
Query: 390 LHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQS 449
L+ GM TS W E+ L S+ Y+H G PK W+S+P + + ++ AK + P +
Sbjct: 162 LYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLESLAKGFFPGSAQSCE 221
Query: 450 KWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
+ + +SP LK G+P + TQ GEF+ G F C
Sbjct: 222 AFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMFTL-GLEKERFPC 266
Score = 98 (39.6 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKE-NDIWKSSKFVTQIQ 201
FYPT EEF + +YIA + + + G+ ++VPP WKP + +D+ + +
Sbjct: 17 FYPTVEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDDLVIPAPIQQLVT 76
Query: 202 QIDGLQNQYFSSKAA 216
GL QY K A
Sbjct: 77 GQSGLFTQYNIQKKA 91
Score = 39 (18.8 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 42/156 (26%), Positives = 65/156 (41%)
Query: 568 GKDGILAKAL-KSRINSESNRRKYLCSSSQSQRMDKNFDYTSKRECNICLYDL-HLSAAF 625
G++G L ++L K RI ++ +R +C SQ + K E YDL AA
Sbjct: 358 GEEGDLRRSLAKHRIGTKRHR---VCXQEVSQS-----ELFPKEELGSGQYDLVACQAAL 409
Query: 626 CPCSPDIYSCLNHVKQLCSCAWTEKIFLFRYEIS-----------------ELNVLLEAV 668
P P +S + V+ S TE + R +S +L+V ++
Sbjct: 410 APVRPT-HSSVRPVEDGLSGPXTEPGRVRRGLVSVSASGEEEEEEQEAAALDLSVNPASL 468
Query: 669 EGKLSAVYRWAKDDLKMYLHSYSSRDGLRPNSQAEE 704
G+L V+ +K L S SSRD + S+A E
Sbjct: 469 GGRL--VFSGSKKSSSS-LGSGSSRDSVSSESEASE 501
>UNIPROTKB|I3LVJ1 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005737
GO:GO:0005813 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
Ensembl:ENSSSCT00000026209 Uniprot:I3LVJ1
Length = 916
Score = 158 (60.7 bits), Expect = 7.5e-12, Sum P(3) = 7.5e-12
Identities = 34/106 (32%), Positives = 52/106 (49%)
Query: 390 LHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQS 449
L+ GM TS W E+ L S+ Y+H G PK W+S+P + + ++ AK + P +
Sbjct: 162 LYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLESLAKGFFPGSAQSCE 221
Query: 450 KWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDC 495
+ + +SP LK G+P + TQ GEF+ G F C
Sbjct: 222 AFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMFTL-GLEKERFPC 266
Score = 98 (39.6 bits), Expect = 7.5e-12, Sum P(3) = 7.5e-12
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 144 FYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKE-NDIWKSSKFVTQIQ 201
FYPT EEF + +YIA + + + G+ ++VPP WKP + +D+ + +
Sbjct: 17 FYPTVEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDDLVIPAPIQQLVT 76
Query: 202 QIDGLQNQYFSSKAA 216
GL QY K A
Sbjct: 77 GQSGLFTQYNIQKKA 91
Score = 38 (18.4 bits), Expect = 7.5e-12, Sum P(3) = 7.5e-12
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 660 ELNVLLEAVEGKLSAVYRWAKDDLKMYLHSYSSRDGLRPNSQAEE 704
+L+V ++ G+L V+ +K L S SSRD + S+A E
Sbjct: 465 DLSVNPASLGGRL--VFSGSKKSSSS-LGSGSSRDSVSSESEASE 506
>POMBASE|SPBP19A11.06 [details] [associations]
symbol:lid2 "Lid2 complex subunit, predicted histone
demethylase Lid2" species:4896 "Schizosaccharomyces pombe"
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031507 "heterochromatin
assembly" evidence=IMP] [GO:0031618 "nuclear centromeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0034630 "RITS complex
localization" evidence=IMP] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=IDA] [GO:0048189
"Lid2 complex" evidence=IDA] [GO:0051567 "histone H3-K9
methylation" evidence=IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00184 SMART:SM00249 SMART:SM00558 PomBase:SPBP19A11.06
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0030466
GO:GO:0030702 GO:GO:0000070 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031934 GO:GO:0051567
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0048189 GO:GO:0019787
GO:GO:0031507 GO:GO:0051572 GO:GO:0031618 PROSITE:PS51183
GO:GO:0034630 eggNOG:NOG327026 GO:GO:0034647 OrthoDB:EOG44N21B
KO:K11446 PIR:T50313 RefSeq:NP_596174.1 ProteinModelPortal:Q9HDV4
IntAct:Q9HDV4 STRING:Q9HDV4 EnsemblFungi:SPBP19A11.06.1
GeneID:2541299 KEGG:spo:SPBP19A11.06 OMA:LPCVIRE NextBio:20802409
Uniprot:Q9HDV4
Length = 1513
Score = 199 (75.1 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 54/205 (26%), Positives = 88/205 (42%)
Query: 335 TGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSLLSSESCKTCNLLVPRLHVGM 394
T T S P+ E +KY WNL+NLP L + +L + RL +GM
Sbjct: 391 TSTIQSSLPSK----EVFPLEKYSSEPWNLHNLPFENPCLFNYSFSDLSSLTITRLSIGM 446
Query: 395 CFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNR 454
F + W L++ G W+ +P + F+ P + + N
Sbjct: 447 VFYTHGWTKSSLSTGLLHHHRFGDTVTWYVLPPDESDAFERYLISSYPQYTMEDLNRSNG 506
Query: 455 WVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHG 514
+SPS L G P EF++V SY+ GF GF+ ESVNFA + W+ G
Sbjct: 507 LPVIVSPSSLIENGFHPIAIDLRPNEFLVVSPNSYHMGFHQGFSSFESVNFATVNWIKDG 566
Query: 515 --QNAIELYREQGRKTSISHDKLLL 537
++I + + +S+S++ +++
Sbjct: 567 LLNSSISVLKSMRIPSSVSYEAVII 591
Score = 57 (25.1 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 25/110 (22%), Positives = 44/110 (40%)
Query: 573 LAKALKSRINSES---NRRKYLCSSSQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPC- 628
L K + I +ES N L + Q+ +++ + + C+ C LS F C
Sbjct: 606 LIKCFEDMIANESASKNEIMKLVPNIQALKLESSVPLEIR--CSNCKQPCFLS--FMQCH 661
Query: 629 SPDIYSCLNHVKQLCSCAWTEKIFLFRYEISELNVLLEAVEGKLSAVYRW 678
P + CL + S T + +R+++ EL+ L E + W
Sbjct: 662 EPKKFICLGDCVKEVSLNATSWMLFYRWDVHELSNLAERFVSLIRGPEEW 711
Score = 41 (19.5 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 169 GICRIVPPPSWKPPCLVKENDIWKSSK 195
G +++PP W+ P ++ + SK
Sbjct: 84 GAIKLLPPEGWQIPVVLDQGAFEFQSK 110
>CGD|CAL0001611 [details] [associations]
symbol:orf19.2476 species:5476 "Candida albicans" [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034630 "RITS complex localization" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0031505 "fungal-type cell wall organization"
evidence=IEA] [GO:0043486 "histone exchange" evidence=IEA]
[GO:0016573 "histone acetylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0031507 "heterochromatin assembly"
evidence=IEA] [GO:0051572 "negative regulation of histone H3-K4
methylation" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 CGD:CAL0001611 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AACQ01000041 InterPro:IPR003349
PROSITE:PS51183 eggNOG:NOG327026 RefSeq:XP_718497.1
ProteinModelPortal:Q5AA08 GeneID:3639891 KEGG:cal:CaO19.2476
Uniprot:Q5AA08
Length = 1684
Score = 126 (49.4 bits), Expect = 7.7e-11, Sum P(4) = 7.7e-11
Identities = 30/86 (34%), Positives = 46/86 (53%)
Query: 355 QKYLKSG---WNLNNLPMLPGSLLSSESCKTCN---LLVPRLHVGMCFTSIYWKVEEHCL 408
+K KS WNL+NLP+LP +LL + N L R+++GM F++ W E+H
Sbjct: 584 KKLFKSALHPWNLHNLPILPNALLGALDKTDVNDYDLNESRINIGMTFSTENWTCEDHFT 643
Query: 409 CSLYYMHLGAPKIWHSIPQRYAVKFD 434
+ + GA K W+ IP+ KF+
Sbjct: 644 NLINFQFFGAVKKWYFIPESEFEKFE 669
Score = 100 (40.3 bits), Expect = 7.7e-11, Sum P(4) = 7.7e-11
Identities = 26/82 (31%), Positives = 38/82 (46%)
Query: 459 LSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAI 518
++P L S G+ Q PGE ++ F ++ S GFN SE VN A WL + +
Sbjct: 753 ITPELLDSFGIRYTTTIQEPGECIIKFPKTFSSTISFGFNLSEEVNLATKSWLNYALESE 812
Query: 519 ELYREQGRKTSISHDKLLLGAA 540
+ +Q S KLL+ A
Sbjct: 813 KWLAKQNIIPGFSTFKLLVNLA 834
Score = 76 (31.8 bits), Expect = 7.7e-11, Sum P(4) = 7.7e-11
Identities = 34/115 (29%), Positives = 52/115 (45%)
Query: 62 SDMVDAGTLKRSLRNRPWILYEQSDNNQKESNFEQPVEELSSRATLPKGVIRGCPDCSNC 121
S + D T + +N+ IL+ N S F P ++L +A++P R P S
Sbjct: 41 SSLPDLKTFEVIRQNKK-ILFNGQSTNFNYSPFNLPQQKL--KASIPLDY-RNLP--SKI 94
Query: 122 LKVTARWSPEGAKNDVLEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPP 176
L A S +KN+V P F T E+ D + +I SV +EYG ++ P
Sbjct: 95 LTSPASDSVS-SKNEV----PCFSLTPEQTKDPIAFIESVMDVGKEYGAVKVKLP 144
Score = 37 (18.1 bits), Expect = 7.7e-11, Sum P(4) = 7.7e-11
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 217 KIYDNVNSNSKRRRSLNTGLQNGVG 241
K+Y S+SK LN GL+ +G
Sbjct: 488 KLYWEYISSSKGSNLLNFGLELEMG 512
>SGD|S000004788 [details] [associations]
symbol:ECM5 "Non-essential protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0070211 "Snt2C complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
SGD:S000004788 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:Z49808 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 PIR:S55123
RefSeq:NP_013901.1 ProteinModelPortal:Q03214 SMR:Q03214
DIP:DIP-6678N IntAct:Q03214 MINT:MINT-631320 STRING:Q03214
PaxDb:Q03214 PeptideAtlas:Q03214 PRIDE:Q03214 EnsemblFungi:YMR176W
GeneID:855214 KEGG:sce:YMR176W CYGD:YMR176w eggNOG:KOG1246
OrthoDB:EOG4Z39NV NextBio:978720 Genevestigator:Q03214
GermOnline:YMR176W GO:GO:0070211 InterPro:IPR003349 PROSITE:PS51183
Uniprot:Q03214
Length = 1411
Score = 131 (51.2 bits), Expect = 6.0e-09, Sum P(3) = 6.0e-09
Identities = 41/127 (32%), Positives = 64/127 (50%)
Query: 321 PTEEIEVLY----GENL---ETGTFGSGFP-TVSNPCEASDHQKY-LKS---GWNLNNLP 368
P +E E LY E+ E T G G P ++ +P S ++K+ +K+ WNL+N+P
Sbjct: 430 PQKEFERLYFHLLSEHFIDFEIDT-GLGLPCSMRSPGNNSSNEKFAIKNILDQWNLDNIP 488
Query: 369 MLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQR 428
+ SLL N +GM F+ W V +H L S+ + HLG+ K+ +SI +
Sbjct: 489 LNELSLLQHLDLDMANFTRTTYDIGMLFSCQGWSVSDHFLPSIDFNHLGSTKLVYSIAPK 548
Query: 429 YAVKFDA 435
KF+A
Sbjct: 549 DMEKFEA 555
Score = 101 (40.6 bits), Expect = 6.0e-09, Sum P(3) = 6.0e-09
Identities = 20/79 (25%), Positives = 38/79 (48%)
Query: 461 PSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIEL 520
P+ + + G+ +Y+ TQ G ++ F ++ GF S++ FAP WL A +
Sbjct: 634 PNFILANGIKLYKTTQEQGSYIFKFPKAFTCSIGSGFYLSQNAKFAPSSWLRFSSEAAKW 693
Query: 521 YREQGRKTSISHDKLLLGA 539
+ G + ++LL+ A
Sbjct: 694 TSKMGFLPGLDVNQLLINA 712
Score = 41 (19.5 bits), Expect = 6.0e-09, Sum P(3) = 6.0e-09
Identities = 21/95 (22%), Positives = 37/95 (38%)
Query: 142 PVFYPTEEEFSDTLKYIASVRLKSEEYGICR--IVPPPSWKPPCLVKENDIWKSSKFVTQ 199
P F ++E D +K+ V YG + I+P V + +W ++ Q
Sbjct: 119 PTFILAKKELPDPIKFYELVEDLGSVYGCVKLKIIPDADKFTQLNVDVDRLWFKAR--KQ 176
Query: 200 IQQIDGLQNQYFSSKAAKIYDNVNSNSKRRRSLNT 234
+ Q AK+Y N ++K ++S T
Sbjct: 177 FFNSNEFQRTKIVDFYAKLY---NFHNKIKKSTLT 208
>UNIPROTKB|F5GZ99 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886
ChiTaRS:KDM5A IPI:IPI00872073 ProteinModelPortal:F5GZ99 SMR:F5GZ99
Ensembl:ENST00000535014 ArrayExpress:F5GZ99 Bgee:F5GZ99
Uniprot:F5GZ99
Length = 126
Score = 137 (53.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQ 199
E PVF P+ EEF+D L +I +R +E+ GIC+I PP W+PP + KS +F +
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEV----KSFRFTPR 73
Query: 200 IQQIDGLQ 207
+Q+++ L+
Sbjct: 74 VQRLNELE 81
>UNIPROTKB|F5GZR8 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886
ChiTaRS:KDM5A IPI:IPI01011614 ProteinModelPortal:F5GZR8 SMR:F5GZR8
Ensembl:ENST00000543507 ArrayExpress:F5GZR8 Bgee:F5GZR8
Uniprot:F5GZR8
Length = 131
Score = 117 (46.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 140 EAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKENDIW-------- 191
E PVF P+ EEF+D L +I +R +E+ GIC+I PP W+ + K+ W
Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKFWQISSVSKD---WQPPFACEV 74
Query: 192 KSSKFVTQIQQIDGLQ 207
KS +F ++Q+++ L+
Sbjct: 75 KSFRFTPRVQRLNELE 90
>UNIPROTKB|G4NIH1 [details] [associations]
symbol:MGG_09841 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 EMBL:CM001236
RefSeq:XP_003720398.1 EnsemblFungi:MGG_09841T0 GeneID:2680840
KEGG:mgr:MGG_09841 Uniprot:G4NIH1
Length = 419
Score = 125 (49.1 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 38/125 (30%), Positives = 55/125 (44%)
Query: 385 LLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQ--RYAVKFDAAAKKYLP 442
L P + G W VE+ L SL ++ G K+W IP+ R A + +
Sbjct: 219 LCYPYKYEGTALAPFTWHVEDVGLISLNHLFQGV-KVWFCIPRADRLAAEEVFRSAPMTA 277
Query: 443 TLSFKQSKWHNRWVASLSP-SPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSE 501
T + + R A+L + L+ GV V Q GE V +Y+SGF G+ E
Sbjct: 278 TAAIPHHEQFMRHNATLDGHAALRRAGVRVVPVVQRAGEIVATLPEAYHSGFSAGYTVCE 337
Query: 502 SVNFA 506
+VNFA
Sbjct: 338 AVNFA 342
Score = 38 (18.4 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 146 PTEEEFSDTLKYIASVRLKSEE 167
PT + T++YI V L++ E
Sbjct: 168 PTTRLAAGTMRYIVDVPLETPE 189
>UNIPROTKB|G4MMV6 [details] [associations]
symbol:MGG_02045 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 EMBL:CM001231
RefSeq:XP_003708798.1 EnsemblFungi:MGG_02045T0 GeneID:2681322
KEGG:mgr:MGG_02045 Uniprot:G4MMV6
Length = 1104
Score = 124 (48.7 bits), Expect = 0.00084, P = 0.00084
Identities = 57/243 (23%), Positives = 103/243 (42%)
Query: 280 EQYFCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRRI--IENPTEEIEVLYGENLETGT 337
+Q CT + +D +F K+ + SL + +++ ++ T+ E L E+ +
Sbjct: 554 QQAQCTTYVPEKLDGFWRLFTKKEKSSLPLLPANPQKVGCLDAATKAYENLVAESFKQKK 613
Query: 338 FGSGFPTVSN-PCEASDHQK--YLKSGWNLNNLPMLP--GSLLSSESCKTCNLLVPRLHV 392
G ++ P E S+ + YL P+ P G+ L L P +
Sbjct: 614 SLEGVAYQTDIPAETSNERDCAYLPP-----ESPIWPIRGNKLPRTGIP--GLHTPTCYR 666
Query: 393 GMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQ--SK 450
G F W E+ L ++ Y+H G KIW + FD A + L+ Q S+
Sbjct: 667 GTPFAPFAWHHEDFELGAINYLHYGQ-KIWFVTHPGF---FDKATATFQEALNIDQDHSQ 722
Query: 451 WHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEW 510
+ L+++ +P Q G+ V+V+ +Y+SGF +E+VN+A +++
Sbjct: 723 FLRHEAVHGGVQYLRNKDIPTIGFMQEAGQIVVVYPRAYHSGFGATATVAEAVNYADLQY 782
Query: 511 -LP 512
LP
Sbjct: 783 TLP 785
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 727 727 0.00086 121 3 11 22 0.43 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 119
No. of states in DFA: 632 (67 KB)
Total size of DFA: 438 KB (2207 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 66.87u 0.17s 67.04t Elapsed: 00:00:03
Total cpu time: 66.90u 0.17s 67.07t Elapsed: 00:00:03
Start: Sat May 11 02:30:30 2013 End: Sat May 11 02:30:33 2013
WARNINGS ISSUED: 1