Query 039459
Match_columns 727
No_of_seqs 272 out of 666
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 16:51:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039459.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039459hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ox0_A JMJC domain-containing 100.0 1.4E-88 4.7E-93 733.8 17.6 317 135-540 30-347 (381)
2 3dxt_A JMJC domain-containing 100.0 1.7E-87 5.9E-92 717.0 15.8 316 136-540 13-329 (354)
3 3opt_A DNA damage-responsive t 100.0 2.6E-85 9.1E-90 703.4 12.9 343 138-536 11-368 (373)
4 3avr_A Lysine-specific demethy 100.0 7.6E-58 2.6E-62 511.5 17.8 286 356-670 225-522 (531)
5 4ask_A Lysine-specific demethy 100.0 2.2E-52 7.5E-57 460.8 21.9 282 362-671 206-498 (510)
6 2xxz_A Lysine-specific demethy 100.0 3.1E-45 1E-49 389.9 9.8 160 357-525 167-331 (332)
7 2ypd_A Probable JMJC domain-co 98.2 2.8E-06 9.4E-11 92.1 8.0 104 420-526 234-344 (392)
8 3kv4_A PHD finger protein 8; e 97.7 0.00019 6.6E-09 79.8 13.4 139 389-543 234-375 (447)
9 3k3o_A PHF8, PHD finger protei 97.7 9.8E-05 3.4E-09 80.3 10.5 140 388-543 149-291 (371)
10 3pua_A GRC5, PHD finger protei 97.7 0.00016 5.3E-09 79.2 11.7 139 389-543 177-318 (392)
11 3kv9_A JMJC domain-containing 97.7 0.00013 4.5E-09 79.9 10.8 139 389-543 178-319 (397)
12 3kv5_D JMJC domain-containing 97.6 0.00034 1.2E-08 78.7 13.7 139 389-543 269-410 (488)
13 2yu1_A JMJC domain-containing 97.6 0.00052 1.8E-08 76.5 14.2 139 388-542 198-339 (451)
14 3k2o_A Bifunctional arginine d 97.5 8.8E-05 3E-09 79.8 6.6 122 387-513 173-297 (336)
15 4gjz_A Lysine-specific demethy 97.2 0.0006 2E-08 67.4 8.3 108 387-506 125-235 (235)
16 3pur_A Lysine-specific demethy 97.0 0.0012 4E-08 74.6 8.6 139 388-542 298-443 (528)
17 3d8c_A Hypoxia-inducible facto 96.3 0.013 4.5E-07 63.0 10.0 110 385-506 182-296 (349)
18 3al5_A HTYW5, JMJC domain-cont 95.8 0.016 5.3E-07 62.1 7.9 111 385-509 166-277 (338)
19 1vrb_A Putative asparaginyl hy 86.2 1.7 5.7E-05 46.5 8.4 115 388-518 143-264 (342)
20 4diq_A Lysine-specific demethy 69.1 14 0.00047 41.6 9.1 106 387-515 165-274 (489)
21 2xdv_A MYC-induced nuclear ant 38.6 83 0.0028 34.7 8.8 104 385-515 138-246 (442)
22 1wfp_A Zinc finger (AN1-like) 29.2 37 0.0013 28.8 3.1 38 608-647 24-62 (74)
23 1wfh_A Zinc finger (AN1-like) 29.1 21 0.0007 29.5 1.5 38 608-647 14-52 (64)
24 1wff_A Riken cDNA 2810002D23 p 27.0 24 0.00081 30.7 1.6 36 609-646 25-62 (85)
25 1wg2_A Zinc finger (AN1-like) 26.1 24 0.00083 29.1 1.4 37 609-647 15-52 (64)
26 1wfl_A Zinc finger protein 216 21.8 38 0.0013 28.7 1.8 36 609-646 25-61 (74)
27 2gu9_A Tetracenomycin polyketi 21.7 57 0.002 27.2 3.0 38 473-510 63-100 (113)
28 2b8m_A Hypothetical protein MJ 21.0 55 0.0019 28.1 2.8 44 475-518 69-114 (117)
No 1
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=100.00 E-value=1.4e-88 Score=733.81 Aligned_cols=317 Identities=28% Similarity=0.510 Sum_probs=279.4
Q ss_pred CCCCCCCccccCChhhhhCHHHHHHHHHhh-ccccCeeEEcCCCCCCCCCcccccccccCCeeeeeeeeeccccccccch
Q 039459 135 NDVLEEAPVFYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQIQQIDGLQNQYFSS 213 (727)
Q Consensus 135 ~~~l~e~Pvf~PT~eEF~Dpl~YI~~I~~~-a~~yGIcKIVPP~~W~Pp~~~~~~~~~~~~~F~trvQ~l~~L~~r~~~~ 213 (727)
.-.-.++||||||+|||+||++||++|+++ |++|||||||||++|+|++.+++ +++++|.+++|++...+.+
T Consensus 30 ~~~~~~iPVF~PT~EEF~Df~~YI~kIe~~gA~~~GI~KIIPP~~W~p~~~~~~---~~~~~i~~piqQ~~~g~~g---- 102 (381)
T 2ox0_A 30 LNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDD---IDDLVIPAPIQQLVTGQSG---- 102 (381)
T ss_dssp CSTTCCCEEECCCHHHHSCHHHHHHHHHHTTGGGGSEEEECCCTTCCSCSCSTT---CTTCEESSCEEEEEEEETT----
T ss_pred CCCCCCCceEcCCHHHHhCHHHHHHHHHhccccccCceeecCCccCCCccccch---hhhcccCCcceeeecCCCc----
Confidence 344568999999999999999999999998 78999999999999999998754 2578999999998643211
Q ss_pred hhhhhhhccccccccccccccCcccCCCCCCccCCcccccccCCcccccCCCCCHHHHHHHHHHHHHHhhccCCCCCCCC
Q 039459 214 KAAKIYDNVNSNSKRRRSLNTGLQNGVGGNGCTMNLDEARCTEGFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVD 293 (727)
Q Consensus 214 k~~~~~~~~~~~~kr~~~~~~~~~~~~~~~~~~~~~~e~~~~e~fgf~~g~~~tl~~F~~~A~~fk~~~f~~~~~~~~~~ 293 (727)
+..+ +++ +++.|||.+|+++|++++ ++.+.
T Consensus 103 ----~~~~------------------------------------~~~-~~k~~tl~~f~~~a~~~~---~~~p~------ 132 (381)
T 2ox0_A 103 ----LFTQ------------------------------------YNI-QKKAMTVREFRKIANSDK---YCTPR------ 132 (381)
T ss_dssp ----EEEE------------------------------------EEE-ECCCEEHHHHHHHHHSTT---TSCCC------
T ss_pred ----cccc------------------------------------ccc-cccccCHHHHHHHhcccc---cCCCc------
Confidence 1111 111 256799999999998643 22221
Q ss_pred CCccccccCCCCChHHHHHHHHhhccCCCCceeeeeccCCCCCCCCCCCCCCCCCCCCcchhhhhccCCCCCCCCCCCCC
Q 039459 294 ENPLVFKKQGEPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGS 373 (727)
Q Consensus 294 ~n~~~~~~~~~~s~~~vE~efWr~V~~~~~~veV~YGaDl~s~~~GSgFP~~~~~~~~~~~~~y~~~~WNLnnlp~~~~S 373 (727)
..+.++||++|||+|+. ++|+||+|++ ||+|+.. .++|||||||.+.++
T Consensus 133 ----------~~~~~~lE~~fWr~v~~----~~~~YgaD~~----gS~f~~~-------------~~~WNL~~Lp~ll~~ 181 (381)
T 2ox0_A 133 ----------YSEFEELERKYWKNLTF----NPPIYGADVN----GTLYEKH-------------VDEWNIGRLRTILDL 181 (381)
T ss_dssp ----------CSSHHHHHHHHHHHTTS----SCCEEEEEEE----CCCSCTT-------------CCSSCTTCCCCGGGH
T ss_pred ----------cCCHHHHHHHHHhhCCc----CCceeecCCC----cccCCCC-------------CCCCchhhhhhHHHH
Confidence 24689999999999974 4789999998 7777532 479999999999999
Q ss_pred CCcccCCCCCCcccceEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCchhhhhchhhhc
Q 039459 374 LLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHN 453 (727)
Q Consensus 374 lL~~~~~~I~Gvt~P~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p~~~~~~pd~L~ 453 (727)
||++.+.+|+|||+||||+||+||+||||+||++||||||+|+|+||+||+||++++++||++|++++|+++.+|++||+
T Consensus 182 ll~~~~~~I~GVn~P~LYiGm~~S~f~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~~~~~P~~~~~~~~~L~ 261 (381)
T 2ox0_A 182 VEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLR 261 (381)
T ss_dssp HHHHHCCCCBTTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHCTTGGG
T ss_pred HHHhcCCCCCCcccceEEeeccccCcCceecCCcceeeEEeecCCceEEEecCHHHHHHHHHHHHHhChhhhhcchHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCccccccCCCceeeeecCCCcEEEEcCCccceeecccccceeeccccCCCcccchhHHHHHHHhcCCCCCccHH
Q 039459 454 RWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHD 533 (727)
Q Consensus 454 h~~~~isP~~L~~~GIpv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~Wl~~g~~a~~~y~~~~~~~~~s~d 533 (727)
|++++++|+.|+++||||++++|+|||||||||+|||+|||+||||+||||||+++|+++|..|.+|+|... ...|+|+
T Consensus 262 h~~~~isP~~L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNFA~~~Wl~~g~~a~~c~c~~~-~v~i~~d 340 (381)
T 2ox0_A 262 HKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKD-MVKISMD 340 (381)
T ss_dssp GSCEEECHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEECCTTHHHHHHHCCCCCSSTT-CCCCCCH
T ss_pred ccccccCHHHHHHCCCceEEEEecCCCEEEECCCcEEEeecCcccHHHHhccCcHHHHHHhHhhhhccccCC-ceeecHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999988754 5678999
Q ss_pred HHHHHHH
Q 039459 534 KLLLGAA 540 (727)
Q Consensus 534 ~LL~~~A 540 (727)
.|+-++-
T Consensus 341 ~~~~~~~ 347 (381)
T 2ox0_A 341 VFVRKFQ 347 (381)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9877654
No 2
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=100.00 E-value=1.7e-87 Score=717.02 Aligned_cols=316 Identities=28% Similarity=0.492 Sum_probs=278.7
Q ss_pred CCCCCCccccCChhhhhCHHHHHHHHHhh-ccccCeeEEcCCCCCCCCCcccccccccCCeeeeeeeeeccccccccchh
Q 039459 136 DVLEEAPVFYPTEEEFSDTLKYIASVRLK-SEEYGICRIVPPPSWKPPCLVKENDIWKSSKFVTQIQQIDGLQNQYFSSK 214 (727)
Q Consensus 136 ~~l~e~Pvf~PT~eEF~Dpl~YI~~I~~~-a~~yGIcKIVPP~~W~Pp~~~~~~~~~~~~~F~trvQ~l~~L~~r~~~~k 214 (727)
....++||||||+|||+||.+||++|+++ |+++||||||||++|+|+..+++- +++.+.+++|++...+.
T Consensus 13 ~~~~~ipvF~PT~eEF~df~~Yi~~ie~~Ga~~~Gi~KIIPP~~W~~r~~~~~~---~~~~i~~pi~q~~~g~~------ 83 (354)
T 3dxt_A 13 NPNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWKARETYDNI---SEILIATPLQQVASGRA------ 83 (354)
T ss_dssp CTTCCCEEECCCTTGGGCHHHHHHHHHHTTGGGGSEEEECCCTTCCSSSCSTTC---TTCEESSCEEEEEEEET------
T ss_pred CCCCCcceecCCHHHHhCHHHHHHHHHhccccccCcccccCcccccCcccccch---hcccccCCceeeecCCC------
Confidence 34668999999999999999999999998 569999999999999999876532 46899999999763221
Q ss_pred hhhhhhccccccccccccccCcccCCCCCCccCCcccccccCCcccccCCCCCHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 039459 215 AAKIYDNVNSNSKRRRSLNTGLQNGVGGNGCTMNLDEARCTEGFESERGPEFTLETFKKYADDFKEQYFCTKNIDMTVDE 294 (727)
Q Consensus 215 ~~~~~~~~~~~~kr~~~~~~~~~~~~~~~~~~~~~~e~~~~e~fgf~~g~~~tl~~F~~~A~~fk~~~f~~~~~~~~~~~ 294 (727)
++..+. .++.+.||+.+|+++|+. ..|+.+.
T Consensus 84 --G~~~~~-------------------------------------~~~~k~~t~~~f~~~a~~---~~~~~p~------- 114 (354)
T 3dxt_A 84 --GVFTQY-------------------------------------HKKKKAMTVGEYRHLANS---KKYQTPP------- 114 (354)
T ss_dssp --TEEEEE-------------------------------------EEECCCEEHHHHHHHHTS---TTTSCCC-------
T ss_pred --ceEEEe-------------------------------------eeccCccCHHHHHHHHhh---hhccCCC-------
Confidence 111111 123567999999999984 2343332
Q ss_pred CccccccCCCCChHHHHHHHHhhccCCCCceeeeeccCCCCCCCCCCCCCCCCCCCCcchhhhhccCCCCCCCCCCCCCC
Q 039459 295 NPLVFKKQGEPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGWNLNNLPMLPGSL 374 (727)
Q Consensus 295 n~~~~~~~~~~s~~~vE~efWr~V~~~~~~veV~YGaDl~s~~~GSgFP~~~~~~~~~~~~~y~~~~WNLnnlp~~~~Sl 374 (727)
..+.++||++||+.|... .|+||||++ ||+||.. .++|||+|||.+.++|
T Consensus 115 ---------~~~~~~lE~~fW~~~~~~----~p~YgaD~~----gS~F~~~-------------~~~WNL~~L~~~~~~L 164 (354)
T 3dxt_A 115 ---------HQNFEDLERKYWKNRIYN----SPIYGADIS----GSLFDEN-------------TKQWNLGHLGTIQDLL 164 (354)
T ss_dssp ---------CSSHHHHHHHHHHHGGGC----CCEEEEEEE----CCCSCTT-------------CCSSCTTSSCCHHHHH
T ss_pred ---------CCCHHHHHHHHhhhcccC----CceeeecCC----CcccCCC-------------cchhhhhhccchhHHH
Confidence 246799999999988643 589999998 9999742 4799999999999999
Q ss_pred CcccCCCCCCcccceEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCchhhhhchhhhcc
Q 039459 375 LSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNR 454 (727)
Q Consensus 375 L~~~~~~I~Gvt~P~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p~~~~~~pd~L~h 454 (727)
|++++.+|+|||+||||+||+||+||||+||++||||||+|+|+||+||+||++++++||++|++++|+++..|++||+|
T Consensus 165 l~~~~~~I~GVntP~LYiGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~~~c~~fL~h 244 (354)
T 3dxt_A 165 EKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGAFLRH 244 (354)
T ss_dssp HHHHCCCCCCCCCCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHCTTGGGG
T ss_pred HhhcCCCCCCccceeeeeccccCCCcceecCCcceEEEEEecCCceEEEEeCHHHHHHHHHHHHHhCchhhhhcHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccccccCCCceeeeecCCCcEEEEcCCccceeecccccceeeccccCCCcccchhHHHHHHHhcCCCCCccHHH
Q 039459 455 WVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSISHDK 534 (727)
Q Consensus 455 ~~~~isP~~L~~~GIpv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~Wl~~g~~a~~~y~~~~~~~~~s~d~ 534 (727)
++++++|+.|+++||||++++|+|||||||||||||+|||+||||+||||||+++||++|+.|.+|.|.... ..|+||.
T Consensus 245 ~~~lisP~~L~~~GIpv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~~A~~C~C~~~~-v~i~~d~ 323 (354)
T 3dxt_A 245 KVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGEAR-VTFSMDA 323 (354)
T ss_dssp CCEEECHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCGGGHHHHHHCCCCCSSSCC-CCHHHHH
T ss_pred CcccCCHHHHHHCCCceEEEEeCCCcEEEECCCceEEEeeccccHhHhhccCcHHHHHhhhhcccccccCcc-ceecHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998664 6799999
Q ss_pred HHHHHH
Q 039459 535 LLLGAA 540 (727)
Q Consensus 535 LL~~~A 540 (727)
++..+-
T Consensus 324 ~~~~~~ 329 (354)
T 3dxt_A 324 FVRILQ 329 (354)
T ss_dssp HHHHHC
T ss_pred HHHhhC
Confidence 886554
No 3
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=100.00 E-value=2.6e-85 Score=703.41 Aligned_cols=343 Identities=27% Similarity=0.444 Sum_probs=232.6
Q ss_pred CCCCccccCChhhhhCHHHHHHHHHhhccccCeeEEcCCCCCCCCCcccc-cccccCCeeeeeeeeecc-------cccc
Q 039459 138 LEEAPVFYPTEEEFSDTLKYIASVRLKSEEYGICRIVPPPSWKPPCLVKE-NDIWKSSKFVTQIQQIDG-------LQNQ 209 (727)
Q Consensus 138 l~e~Pvf~PT~eEF~Dpl~YI~~I~~~a~~yGIcKIVPP~~W~Pp~~~~~-~~~~~~~~F~trvQ~l~~-------L~~r 209 (727)
.++|||||||+|||+||.+||++|+++|+++||||||||++|+|+..... ...++++++.++||+.-. .||.
T Consensus 11 ~~~~pVF~PT~eeF~dF~~yi~~i~~~g~~~Gi~KVIPPkeW~~~~~~~~~~~~l~~~~i~~PI~Q~~~G~~G~~~~~ni 90 (373)
T 3opt_A 11 VGGVPVFKPTYEQFEDFYAYCKAINKYGMKSGVVKVIPPKEWKDKLDLPYSAETLQKIKIKSPIQQHISGNKGLFMVQNV 90 (373)
T ss_dssp ESSSEEECCCHHHHTCHHHHHHTTHHHHTTSSEEEECCCHHHHTTSCSSCCHHHHHHCEEESCEEEEEEESSSEEEEEEE
T ss_pred cCCCCeeCCCHHHHhCHHHHHHHHHHhccccCeEEEeCchhhhhcccCCCcHhHHhcCcCCCCcEEEecCCCceEEEeee
Confidence 47899999999999999999999999999999999999999999964211 122467899999999433 2333
Q ss_pred ccchh-----hhhhhhccc--cccccccccccCcccCCCCCCccCCcccccccCCcccccCCCCCHHHHHHHHHHHHHHh
Q 039459 210 YFSSK-----AAKIYDNVN--SNSKRRRSLNTGLQNGVGGNGCTMNLDEARCTEGFESERGPEFTLETFKKYADDFKEQY 282 (727)
Q Consensus 210 ~~~~k-----~~~~~~~~~--~~~kr~~~~~~~~~~~~~~~~~~~~~~e~~~~e~fgf~~g~~~tl~~F~~~A~~fk~~~ 282 (727)
..++. +..+.+... .++++|+..+.|... .... +.. . +.+..+|+++|+++++.|+..
T Consensus 91 e~~r~~~~~q~k~l~~~~~~p~~~~~~~~~~~~~~~--~~~~--~~~------~----~~~~~~~~~~~~~~~~~~~~~- 155 (373)
T 3opt_A 91 EKNKTYNIIQWKDLSKDYVPPEDPKARRNSRKGSVS--KSTK--LKL------K----NFESSFNIDDFEQFRTEYTID- 155 (373)
T ss_dssp ECSCEEEHHHHHHHTTSSCCCCC--------------------------------------CCCCHHHHHHHTTTSSCC-
T ss_pred ccccccCHHHHHHhhhhcCCCccccccccccccccc--cccc--ccc------c----ccccccchHHHHHHHHhhccc-
Confidence 32221 122221110 011111111111100 0000 000 0 112368999998765432211
Q ss_pred hccCCCCCCCCCCccccccCCCCChHHHHHHHHhhccCCCCceeeeeccCCCCCCCCCCCCCCCCCCCCcchhhhhccCC
Q 039459 283 FCTKNIDMTVDENPLVFKKQGEPSLENIEGEYRRIIENPTEEIEVLYGENLETGTFGSGFPTVSNPCEASDHQKYLKSGW 362 (727)
Q Consensus 283 f~~~~~~~~~~~n~~~~~~~~~~s~~~vE~efWr~V~~~~~~veV~YGaDl~s~~~GSgFP~~~~~~~~~~~~~y~~~~W 362 (727)
. ..-..+++.++||++||++|... +|+||||+. ||+||.. .++|
T Consensus 156 ~---------------~~~~~~~~~~~lE~~yW~~~~~~----~p~YgaD~~----GS~F~~~-------------~~~W 199 (373)
T 3opt_A 156 L---------------SDFQNTERLKFLEEYYWKTLNFT----TPMYGADTP----GSIFPEG-------------LNVW 199 (373)
T ss_dssp C---------------TTSSCHHHHHHHHHHHHHTTTTS----CCEEEEEEE----CCCSCTT-------------CCSS
T ss_pred h---------------hhccCcchHHHHHHHHHHhccCC----CceEecCCC----CCCcCCC-------------CCcc
Confidence 0 00011245789999999999753 689999986 9999852 4899
Q ss_pred CCCCCCCCCCCCCcccCCCCCCcccceEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCc
Q 039459 363 NLNNLPMLPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLP 442 (727)
Q Consensus 363 NLnnlp~~~~SlL~~~~~~I~Gvt~P~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p 442 (727)
||+|||+ ||+|++.+|+|||+||||+||+||+||||+||++||||||+|+|+||+||+||++++++||++|++++|
T Consensus 200 NL~~Lp~----lL~~l~~~I~GVntP~LYvGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p 275 (373)
T 3opt_A 200 NVAKLPN----ILDHMETKVPGVNDSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFP 275 (373)
T ss_dssp CTTSCC------------------CCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEECCGGGHHHHHHHHHHSSH
T ss_pred Chhhhhh----HHHHhcccCCCcchhheeeccccCCcceeecCCcceeEEEeecCCCeEEEEeCHHHHHHHHHHHHHhCh
Confidence 9999994 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhchhhhcccccccCccccccCCCceeeeecCCCcEEEEcCCccceeecccccceeeccccCCCcccchhHHHHHHH
Q 039459 443 TLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYR 522 (727)
Q Consensus 443 ~~~~~~pd~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~Wl~~g~~a~~~y~ 522 (727)
+++.+|++||+|++++++|+.|+++||||++++|+|||||||||+|||+|||+||||+||||||+++||++|+.|..|.|
T Consensus 276 ~~~~~c~~fL~h~~~lisP~~L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~~a~~C~C 355 (373)
T 3opt_A 276 EEAKNCPEFLRHKMFLASPKLLQENGIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKKAGKCHC 355 (373)
T ss_dssp HHHSSCSSCTTTSCEEECHHHHHTTTCCCEEEEECTTCEEEECTTCCEEEEESSSEEEEEEEECCC--------------
T ss_pred hhhhhCHHHhhCCcccCCHHHHHhcCCceEEEEECCCCEEEECCCceEEEEecCccHHHHHccCcHHHHHhhccCccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCccHHHHH
Q 039459 523 EQGRKTSISHDKLL 536 (727)
Q Consensus 523 ~~~~~~~~s~d~LL 536 (727)
.. ....|++++|.
T Consensus 356 ~~-d~v~i~~~~~~ 368 (373)
T 3opt_A 356 IS-DSVEIDVKKLA 368 (373)
T ss_dssp --------------
T ss_pred cC-CcceecHHHHH
Confidence 83 33556666653
No 4
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=100.00 E-value=7.6e-58 Score=511.49 Aligned_cols=286 Identities=17% Similarity=0.171 Sum_probs=235.7
Q ss_pred hhhccCCCCCCCCC-----CCCCCCcccCCCCCCcccceEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhH
Q 039459 356 KYLKSGWNLNNLPM-----LPGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYA 430 (727)
Q Consensus 356 ~y~~~~WNLnnlp~-----~~~SlL~~~~~~I~Gvt~P~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~ 430 (727)
++...-|||++||. ..||||+|++..|+|||+||||+||+||+||||+||++|+||||||+|++|+||+||.+++
T Consensus 225 ~w~~ql~el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~~ 304 (531)
T 3avr_A 225 KWKLQLHELTKLPAFVRVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEGYW 304 (531)
T ss_dssp TTHHHHHHGGGSCGGGCSSCTTCGGGGSCSCCBTTSSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGH
T ss_pred hhHHHHHHHHhCCHHHcccCccchhhhcCCCCCCcChhheEeecCcccccceecCCcceeeEeecCCCCeEEEEeCHHHH
Confidence 34456789999997 4899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCchhhhhchhhhcccccccCccccccCCCceeeeecCCCcEEEEcCCccceeecccccceeeccccCCCc
Q 039459 431 VKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEW 510 (727)
Q Consensus 431 ~kfE~l~~~~~p~~~~~~pd~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~W 510 (727)
++||++++++. .+++ +..++++|+.|+++|||||+++|+|||||||||||||||||+|||++||||||+++|
T Consensus 305 ~k~e~l~~k~~-------~~~~-~~~~~~~p~~L~~~gIPvyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~ 376 (531)
T 3avr_A 305 GVLNDFCEKNN-------LNFL-MGSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTA 376 (531)
T ss_dssp HHHHHHHHHTT-------CCTT-TSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCSSH
T ss_pred HHHHHHHHHcC-------CChh-hceeecCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeeeEEEeccCch
Confidence 99999998863 3444 446788999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHh---cCCCCCccHHHHHHHHHHhhhhhhHHHHhhhhcCccccchhcccchhhHHHHHHHHHHHHHHhh
Q 039459 511 LPHGQNAIELYRE---QGRKTSISHDKLLLGAAREVVKTQWEISLVKKHTSDNFMWRHVSGKDGILAKALKSRINSESNR 587 (727)
Q Consensus 511 l~~g~~a~~~y~~---~~~~~~~s~d~LL~~~A~~~~~~~~~~~~l~~~~~~~~~w~~~~~~~~~l~~~l~~~~~~E~~~ 587 (727)
++++. |+++|.. .+..++|||++|+|++|+.....+ ... ..++...|.+.+..+..+
T Consensus 377 ~q~~~-A~e~y~~Nk~~~~~sivp~~~L~wn~a~~~~~~d----------~~l---------~~~ik~~L~rsl~~~~~~ 436 (531)
T 3avr_A 377 CQYKL-AVERYEWNKLQSVKSIVPMVHLSWNMARNIKVSD----------PKL---------FEMIKYCLLRTLKQCQTL 436 (531)
T ss_dssp HHHHH-HHHHHHHHHHHTCCCSSCHHHHHHHHHHHCCCCC----------HHH---------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHhhhccCCCCCCHHHHHHHHHhhhhccc----------HHH---------HHHHHHHHHHHHHHHHHH
Confidence 99985 7777754 345799999999999998532111 000 112333345555656677
Q ss_pred HHhhhccccccccccccCCCCCcccccccccccccccccCc----cCCccccccchhhhcCCCCCccEEEEecCHHHHHH
Q 039459 588 RKYLCSSSQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPC----SPDIYSCLNHVKQLCSCAWTEKIFLFRYEISELNV 663 (727)
Q Consensus 588 re~l~~~~~~~k~~~~~d~~~~~~C~~Ck~~~flS~V~C~c----~~~~~~CL~Ha~~lC~C~~~~~~llyRy~~~eL~~ 663 (727)
|++|...+...++.+....++.+.|..|++.||++.+.|.. ....++|++|+...|.| .++.+++|||+++||..
T Consensus 437 ~~~l~~~g~~i~~~~~~~~~~~~~C~~C~~~lFn~~~v~~~~~~~~~~~v~C~~Ca~~~~~~-l~~~~v~~ry~~eeL~~ 515 (531)
T 3avr_A 437 REALIAAGKEIIWHGRTKEEPAHYCSICEVEVFDLLFVTNESNSRKTYIVHCQDCARKTSGN-LENFVVLEQYKMEDLMQ 515 (531)
T ss_dssp HHHHHHTTCCEEECCCCTTCCCEECTTTCCEECSEEEEEECTTCSSEEEEECHHHHHHHCTT-CTTCEEEECSCHHHHHH
T ss_pred HHHHHhCCCEEEeccccCCCCCeeccccchhheeeEEEEecCCCCCCCCcCChhhhhhcCcc-ccceEEEEEcCHHHHHH
Confidence 77777766655555443345789999999999999977742 22357999999875544 57889999999999999
Q ss_pred HHHHHHh
Q 039459 664 LLEAVEG 670 (727)
Q Consensus 664 lv~~l~~ 670 (727)
++++|+.
T Consensus 516 ~yd~f~~ 522 (531)
T 3avr_A 516 VYDQFTL 522 (531)
T ss_dssp HHHTCCC
T ss_pred HHHheEe
Confidence 9998865
No 5
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=100.00 E-value=2.2e-52 Score=460.83 Aligned_cols=282 Identities=15% Similarity=0.155 Sum_probs=227.6
Q ss_pred CCCCCCCCC-----CCCCCcccCCCCCCcccceEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHH
Q 039459 362 WNLNNLPML-----PGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAA 436 (727)
Q Consensus 362 WNLnnlp~~-----~~SlL~~~~~~I~Gvt~P~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l 436 (727)
.+|++||.. .|+||+|++..|+|||+||||+||+||+||||+||++|+||||+|+|++|+||+||++++++||++
T Consensus 206 ~eL~kLP~flr~~~~gslLs~l~~~I~GVNtpqLYigm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l 285 (510)
T 4ask_A 206 QELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAF 285 (510)
T ss_dssp HHGGGSCGGGSSSCTTBGGGGSSSCCTTTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHH
T ss_pred HHHhhCcHHhCcCCCCchhhhCCCcCCCcChhheEEccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHH
Confidence 345666654 489999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCchhhhhchhhhcccccccCccccccCCCceeeeecCCCcEEEEcCCccceeecccccceeeccccCCCccc--ch
Q 039459 437 AKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLP--HG 514 (727)
Q Consensus 437 ~~~~~p~~~~~~pd~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~Wl~--~g 514 (727)
+++.. +++|+ ..++++|+.|+++||||||++|+|||||||||||||||+|+|||+++|||||+++|.+ .+
T Consensus 286 ~~k~~-------~d~l~-~~~~pspe~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaWNvap~t~~qlqlA 357 (510)
T 4ask_A 286 CDRHG-------VDYLT-GSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQLA 357 (510)
T ss_dssp HHHTT-------CCTTT-SCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECBSSHHHHHHH
T ss_pred HHHhC-------cchhh-ccccCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecCeeeeeEEEecCCCHHHHHHH
Confidence 99854 45664 4567899999999999999999999999999999999999999999999999999755 56
Q ss_pred hHHHHHHHhcCCCCCccHHHHHHHHHHhhhhhhHHHHhhhhcCccccchhcccchhhHHHHHHHHHHHHHHhhHHhhhcc
Q 039459 515 QNAIELYREQGRKTSISHDKLLLGAAREVVKTQWEISLVKKHTSDNFMWRHVSGKDGILAKALKSRINSESNRRKYLCSS 594 (727)
Q Consensus 515 ~~a~~~y~~~~~~~~~s~d~LL~~~A~~~~~~~~~~~~l~~~~~~~~~w~~~~~~~~~l~~~l~~~~~~E~~~re~l~~~ 594 (727)
.++.++++..++.++|||++|+|+||++....+.++- .++...|.+.+......++++.+.
T Consensus 358 ~e~y~~n~~~~~~SivPm~~L~Wn~Ar~~k~~d~~l~-------------------~liK~~L~rSL~~~~~~~d~~~~~ 418 (510)
T 4ask_A 358 LERYEWNEVKNVKSIVPMIHVSWNVARTVKISDPDLF-------------------KMIKFCLLQSMKHCQVQRESLVRA 418 (510)
T ss_dssp HHHHHHHHHTTCCCSSCHHHHHHHHHHHCCCCCHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCcccChHHHHHHHHhhhhccCHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6677788888999999999999999986432221111 112222333333344455667666
Q ss_pred ccccccccccCCCCCcccccccccccccccccCcc----CCccccccchhhhcCCCCCccEEEEecCHHHHHHHHHHHHh
Q 039459 595 SQSQRMDKNFDYTSKRECNICLYDLHLSAAFCPCS----PDIYSCLNHVKQLCSCAWTEKIFLFRYEISELNVLLEAVEG 670 (727)
Q Consensus 595 ~~~~k~~~~~d~~~~~~C~~Ck~~~flS~V~C~c~----~~~~~CL~Ha~~lC~C~~~~~~llyRy~~~eL~~lv~~l~~ 670 (727)
+...++.+....+..+.|..|...+|.-...-..+ ...++|+.|+.... -...++++++||+++||.++++.|..
T Consensus 419 g~~i~~~~~~~~~~~~~C~~C~~evFn~l~v~~~~~~~~~~~v~C~~Ca~~~~-~~~~~~~vl~~y~~~~L~~iyD~f~l 497 (510)
T 4ask_A 419 GKKIAYQGRVKDEPAYYCNECDVEVFNILFVTSENGSRNTYLVHCEGCARRRS-AGLQGVVVLEQYRTEELAQAYDAFTL 497 (510)
T ss_dssp TCCEEECCCCTTCCCEECTTTCCEECSEEEEEECC----CEEEECHHHHHHST-TTTTTCEEEESSCHHHHHHHHHHCCC
T ss_pred CCEEeecCcCCCCcccccCCCCeEEEEEEEEEecCCCCCccceEChHhhhhcC-CCcceEEEEEEccHHHHHHHHhCeEe
Confidence 66666666555456789999999999885333222 12479999998753 46788999999999999999999876
Q ss_pred h
Q 039459 671 K 671 (727)
Q Consensus 671 ~ 671 (727)
.
T Consensus 498 ~ 498 (510)
T 4ask_A 498 A 498 (510)
T ss_dssp C
T ss_pred c
Confidence 3
No 6
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-45 Score=389.92 Aligned_cols=160 Identities=18% Similarity=0.176 Sum_probs=139.5
Q ss_pred hhccCCCCCCCCCC-----CCCCCcccCCCCCCcccceEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHH
Q 039459 357 YLKSGWNLNNLPML-----PGSLLSSESCKTCNLLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAV 431 (727)
Q Consensus 357 y~~~~WNLnnlp~~-----~~SlL~~~~~~I~Gvt~P~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~ 431 (727)
+...-.+|+.||.. .+|||+|++..|+|||+||||+||+||+||||+||++|+||||+|+|++|+||+||+++++
T Consensus 167 w~~q~~el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~~~ 246 (332)
T 2xxz_A 167 WKPQLQELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWE 246 (332)
T ss_dssp HHHHHHHHTTSCGGGCTTTTCCCSEETTEECCCTTSEEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHH
T ss_pred hHHHHHHHhhCcHhhcccCccchhhhcCCcCCCcChhheEeecCcccccceecCCcceeEEeecCCCceEEEEECHHHHH
Confidence 33344568999865 6899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCchhhhhchhhhcccccccCccccccCCCceeeeecCCCcEEEEcCCccceeecccccceeeccccCCCcc
Q 039459 432 KFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWL 511 (727)
Q Consensus 432 kfE~l~~~~~p~~~~~~pd~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~Wl 511 (727)
+||++|++..+ +++ +..++++|+.|+++||||||++|+|||||||||||||||||+|||++||||||+++|+
T Consensus 247 ~~e~l~~k~~~-------d~~-~~~~~~~p~~L~~~gIPvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~~ 318 (332)
T 2xxz_A 247 TISAFCDRHGV-------DYL-TGSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAY 318 (332)
T ss_dssp HHHHHHHHTTC-------CTT-TSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEESCTTG
T ss_pred HHHHHHHhcCC-------chh-hceecCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeEEEEEeCCCcHH
Confidence 99999998654 333 3456899999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHhcC
Q 039459 512 PHGQNAIELYREQG 525 (727)
Q Consensus 512 ~~g~~a~~~y~~~~ 525 (727)
++. .|+++|..++
T Consensus 319 q~~-~a~erye~n~ 331 (332)
T 2xxz_A 319 QYQ-LALERYEWNE 331 (332)
T ss_dssp GGG-GC--------
T ss_pred HHH-HHHHHHHhhc
Confidence 885 8999998753
No 7
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=98.16 E-value=2.8e-06 Score=92.10 Aligned_cols=104 Identities=14% Similarity=0.101 Sum_probs=80.4
Q ss_pred ceEEeeChhhHHHHHHHHHHhCchhh---hhchhhhcccccccCccc---c-ccCCCceeeeecCCCcEEEEcCCcccee
Q 039459 420 KIWHSIPQRYAVKFDAAAKKYLPTLS---FKQSKWHNRWVASLSPSP---L-KSEGVPVYRCTQSPGEFVLVFSGSYYSG 492 (727)
Q Consensus 420 K~WY~VP~~~~~kfE~l~~~~~p~~~---~~~pd~L~h~~~~isP~~---L-~~~GIpv~r~vQ~pGEfVvTfP~aYH~g 492 (727)
-+|-...+.++.|+.++++++..+.. ....+-++.+.+.++... | .+.||..+.++|++||.|++-+|++|.+
T Consensus 234 AlW~Ifr~~D~~klr~~L~~~~~e~~~~~~~~~dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~~HQV 313 (392)
T 2ypd_A 234 ALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQV 313 (392)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHC------CCHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTCEEEE
T ss_pred ceeeeeCHhhHHHHHHHHHHHHHhhCCCccCCCCcCcCCCEEecHHHHHHHHHhcCCeeEEEEEcCCCEEEecCCCHHHH
Confidence 58999999999999999999765421 112245666677777742 3 4579999999999999999999999999
Q ss_pred ecccccceeeccccCCCcccchhHHHHHHHhcCC
Q 039459 493 FDCGFNCSESVNFAPIEWLPHGQNAIELYREQGR 526 (727)
Q Consensus 493 fn~GfN~aEAVNFA~~~Wl~~g~~a~~~y~~~~~ 526 (727)
.|.+-++..|+||..+.-+.. |.+...+.++
T Consensus 314 ~Nl~~~i~va~df~spe~~~~---c~~lt~E~R~ 344 (392)
T 2ypd_A 314 QNFHSCIQVTEDFVSPEHLVE---SFHLTQELRL 344 (392)
T ss_dssp EESSEEEEEEEEECCGGGHHH---HHHHHHHC--
T ss_pred hcccchhhHhhhhcChhhHHH---HHHHHHHHhh
Confidence 999999999999999875543 4444444443
No 8
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=97.74 E-value=0.00019 Score=79.83 Aligned_cols=139 Identities=10% Similarity=0.057 Sum_probs=101.1
Q ss_pred eEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCchhhhhchhhhcccccccCccccccCC
Q 039459 389 RLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEG 468 (727)
Q Consensus 389 ~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p~~~~~~pd~L~h~~~~isP~~L~~~G 468 (727)
|+++|..+|.+.+|++-....+.|.+..| -|.||-+||.... +. +.++... ..++ ....-+ ...
T Consensus 234 ~~~mG~~gS~T~~HiD~~~ts~w~~vi~G-rK~w~L~PPt~~n-l~-~~~~~~~----s~~~-----~~~~~~----~~~ 297 (447)
T 3kv4_A 234 YCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNAN-LT-LFECWSS----SSNQ-----NEMFFG----DQV 297 (447)
T ss_dssp EEEEECTTEEEEEECCGGGCEEEEEEEES-EEEEEEECCCHHH-HH-HHHHHHT----CSSG-----GGSCGG----GGS
T ss_pred EEEEeCCCCCCCeeECCCCCceeEEEeee-EEEEEEeCCCccc-cc-chhhccc----Ccch-----hhhhcc----ccc
Confidence 89999999999999999999888999999 6999999999643 11 1111110 0000 001111 123
Q ss_pred CceeeeecCCCcEEEEcCCccceeecccccceeeccccCCCcccchhHHHHHHHhcCCCC--Ccc-HHHHHHHHHHhh
Q 039459 469 VPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKT--SIS-HDKLLLGAAREV 543 (727)
Q Consensus 469 Ipv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~Wl~~g~~a~~~y~~~~~~~--~~s-~d~LL~~~A~~~ 543 (727)
...++++|+|||.+++-.|-+|+++|..-+++..-||.+..-++.-....+.=++.+.+. .|+ .+.++|-+|...
T Consensus 298 ~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~E~~~~~~~~~~~p~f~~~~w~~~~~~ 375 (447)
T 3kv4_A 298 DKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHI 375 (447)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCSTTHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHHH
T ss_pred cceEEEEECCCcEEecCCCCeEEEecCCCEEEEccccccccCHHHHHHHHHHHHhcCCCccccccCHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999998887766655444444332 344 466778888754
No 9
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=97.72 E-value=9.8e-05 Score=80.28 Aligned_cols=140 Identities=11% Similarity=0.064 Sum_probs=99.7
Q ss_pred ceEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCchhhhhchhhhcccccccCccccccC
Q 039459 388 PRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSE 467 (727)
Q Consensus 388 P~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p~~~~~~pd~L~h~~~~isP~~L~~~ 467 (727)
-|+++|..+|.+.+|++-....+-|.+..| -|.||-+||.... +. +.++.... ..+.+ ...+ ..
T Consensus 149 r~l~mGp~gS~T~~HiD~~gts~w~~vv~G-rK~w~L~PPt~~n-l~-~y~~~~~s--~~~~e-------~~~~----~~ 212 (371)
T 3k3o_A 149 KYCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNAN-LT-LFECWSSS--SNQNE-------MFFG----DQ 212 (371)
T ss_dssp CEEEEECTTEEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHH-HH-HHHHHHTS--TTGGG-------SCGG----GT
T ss_pred eEEEEcCCCCCCCeEECCCCCceeEEEeee-EEEEEEECCCccc-cc-cccccccC--Cccch-------hhcc----cc
Confidence 389999999999999999988888999999 6999999998753 21 11111000 00111 1111 12
Q ss_pred CCceeeeecCCCcEEEEcCCccceeecccccceeeccccCCCcccchhHHHHHHHhcCCCC--Ccc-HHHHHHHHHHhh
Q 039459 468 GVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKT--SIS-HDKLLLGAAREV 543 (727)
Q Consensus 468 GIpv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~Wl~~g~~a~~~y~~~~~~~--~~s-~d~LL~~~A~~~ 543 (727)
....++++|+|||.+++-.|-+|+++|..-+++..-||....=++.-..+.+.=.+.+.+. .|+ .+.|+|-+|...
T Consensus 213 ~~~~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~~~~~~f~fp~F~~~~w~~~~~~ 291 (371)
T 3k3o_A 213 VDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHI 291 (371)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHC----CCCTTHHHHHHHHHHHH
T ss_pred cCceEEEEECCCcEEEeCCCCeEEEecCCCeEEECCcccchhhHHHHHHHHHHHHhcCCCcccccccHHHHHHHHHHHH
Confidence 3467999999999999999999999999999999999999987776666554433333322 354 467778887654
No 10
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=97.70 E-value=0.00016 Score=79.20 Aligned_cols=139 Identities=12% Similarity=0.059 Sum_probs=100.5
Q ss_pred eEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCchhhhhchhhhcccccccCccccccCC
Q 039459 389 RLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEG 468 (727)
Q Consensus 389 ~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p~~~~~~pd~L~h~~~~isP~~L~~~G 468 (727)
|+++|+.+|.+.+|++-....+.|.+..| -|.||-+||..... . +.+... ....+ ....-+.. .
T Consensus 177 ~~~mGp~gS~T~fHiD~~gTs~w~~vi~G-rK~w~L~PPt~~nl-~-~y~~~~----~s~~~-----~e~~~~~~----~ 240 (392)
T 3pua_A 177 YCLICVKDSYTDFHIDSGGASAWYHVLKG-EKTFYLIRPASANI-S-LYERWR----SASNH-----SEMFFADQ----V 240 (392)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHH-H-HHHHHH----HSTTG-----GGSCGGGG----S
T ss_pred EEEEeCCCCCCCEeECCCCCceeeeeccc-eEEEEEECCCcccc-c-chhhcc----cCcch-----hhhhhccc----c
Confidence 89999999999999999888889999999 69999999987532 1 111110 00000 00111221 2
Q ss_pred CceeeeecCCCcEEEEcCCccceeecccccceeeccccCCCcccchhHHHHHHHhcC--CCCCcc-HHHHHHHHHHhh
Q 039459 469 VPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQG--RKTSIS-HDKLLLGAAREV 543 (727)
Q Consensus 469 Ipv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~Wl~~g~~a~~~y~~~~--~~~~~s-~d~LL~~~A~~~ 543 (727)
...++++|+|||.+++-.|-+|+++|..-+++..-||.+..=++....+.+.=...+ ..-.|+ .+.|+|-+|...
T Consensus 241 ~~~~ev~l~pGEtlfIPsGWwH~V~nledSIai~gNFl~~~nl~~~l~~~~~E~~~~~~~~f~fp~F~~~~wy~~~~~ 318 (392)
T 3pua_A 241 DKCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKLGSLTQFPNFETACWYMGKHL 318 (392)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCTTCHHHHHHHHHHHHHHTCCCSSCCTTHHHHHHHHHHHH
T ss_pred cceEEEEECCCcEEeeCCCceEEEecCCCEEEEcCcccChhhHHHHHHHHHHHHHhCCCccCcCCChHHHHHHHHHHH
Confidence 466899999999999999999999999999999999999998877666655433333 333454 567778777654
No 11
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=97.69 E-value=0.00013 Score=79.91 Aligned_cols=139 Identities=13% Similarity=0.076 Sum_probs=100.0
Q ss_pred eEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCchhhhhchhhhcccccccCccccccCC
Q 039459 389 RLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEG 468 (727)
Q Consensus 389 ~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p~~~~~~pd~L~h~~~~isP~~L~~~G 468 (727)
|+++|..+|.+.+|++-....+.|.+..| -|.||-+||..... .+.+..... ..+.+ ...+. ..
T Consensus 178 ~l~mGp~gS~T~~HiD~~gts~w~~vv~G-rK~w~L~PPt~~nl--~ly~~~~~s--~~~~e-------~~~~~----~~ 241 (397)
T 3kv9_A 178 YCLMGVQDSYTDFHIDFGGTSVWYHVLWG-EKIFYLIKPTDENL--ARYESWSSS--VTQSE-------VFFGD----KV 241 (397)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHH--HHHHHHHTS--GGGGG-------SCGGG----GS
T ss_pred EEEEcCCCCCCCEEECCCCCceeeeecCc-eEEEEEeCCccccc--ccccccccC--CCcch-------hhhcc----cc
Confidence 99999999999999999999889999999 69999999987541 111111000 01111 01111 12
Q ss_pred CceeeeecCCCcEEEEcCCccceeecccccceeeccccCCCcccchhHHHHHHHhcCCCCCc--c-HHHHHHHHHHhh
Q 039459 469 VPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKTSI--S-HDKLLLGAAREV 543 (727)
Q Consensus 469 Ipv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~Wl~~g~~a~~~y~~~~~~~~~--s-~d~LL~~~A~~~ 543 (727)
...++++|+|||.+++-.|-+|+++|..-+++-.-||....=++.-..+.+.=...+....| + .+.|+|-+|...
T Consensus 242 ~~~~~v~l~pGe~lfIPsGW~H~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~k~~~~~~fp~F~~~~w~~a~~~ 319 (397)
T 3kv9_A 242 DKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFVAKNL 319 (397)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHTCGGGGGSTTHHHHHHHHHHHH
T ss_pred CceEEEEECCCCEEEeCCCCeEEccCCcCeEEECCcccCchhHHHHHHHHHHHHhcCCCccCcCccHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999998777666655443444433333 3 466778777653
No 12
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=97.65 E-value=0.00034 Score=78.71 Aligned_cols=139 Identities=11% Similarity=0.037 Sum_probs=99.9
Q ss_pred eEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCchhhhhchhhhcccccccCccccccCC
Q 039459 389 RLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSEG 468 (727)
Q Consensus 389 ~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p~~~~~~pd~L~h~~~~isP~~L~~~G 468 (727)
|+++|..+|.+.+|++-....+.|.+..| -|.|+-+||...... +.+... ...++ . ...+....
T Consensus 269 ~~~mG~~gS~T~~H~D~~~t~~w~~vv~G-~K~w~L~PPt~~~~~--~y~~~~----~~~~~----~-----~~~~~~~~ 332 (488)
T 3kv5_D 269 YCLMGVQDSYTDFHIDFGGTSVWYHVLWG-EKIFYLIKPTDENLA--RYESWS----SSVTQ----S-----EVFFGDKV 332 (488)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHHH--HHHHHH----TCSSG----G-----GSCGGGSS
T ss_pred EEEEcCCCCCCCeEECCCCCceeeeccCe-eEEEEEeCCcccccc--cccccc----cCCcc----c-----hhhhcccc
Confidence 99999999999999999888888888899 699999999764311 111110 00000 0 01111223
Q ss_pred CceeeeecCCCcEEEEcCCccceeecccccceeeccccCCCcccchhHHHHHHHhcCCCC--Ccc-HHHHHHHHHHhh
Q 039459 469 VPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQGRKT--SIS-HDKLLLGAAREV 543 (727)
Q Consensus 469 Ipv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~Wl~~g~~a~~~y~~~~~~~--~~s-~d~LL~~~A~~~ 543 (727)
...++++|+|||.+++-.|=+|+++|..-+++..-||....=++.-..+.+.=...+... .|+ .+.|+|-+|...
T Consensus 333 ~~~~~~~l~pGe~lfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~e~~~~~~~~~~~p~f~~~~w~~~~~~ 410 (488)
T 3kv5_D 333 DKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFVAKNL 410 (488)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHTTCCTTSSCTTHHHHHHHHHHHH
T ss_pred cceEEEeeCCCCEEEeCCCceEEeeCCCCeEEEccccCCccCHHHHHHHHHHHHhcCCcccccCccHHHHHHHHHHHH
Confidence 477899999999999999999999999999999999999987776666555444444333 333 467778777653
No 13
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=97.60 E-value=0.00052 Score=76.49 Aligned_cols=139 Identities=14% Similarity=0.016 Sum_probs=96.6
Q ss_pred ceEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCchhhhhchhhhcccccccCccccccC
Q 039459 388 PRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSE 467 (727)
Q Consensus 388 P~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p~~~~~~pd~L~h~~~~isP~~L~~~ 467 (727)
-|+++|..+|.+.+|++-....+.|.+..| -|.|+-+||...... +..... ....+.+ .+-|..+
T Consensus 198 r~~~mGp~gS~T~~H~D~~~ts~w~avi~G-rK~w~L~PP~~~~~~--~y~~~~--~s~~q~~-------~~~p~~~--- 262 (451)
T 2yu1_A 198 KYCLMSVRGCYTDFHVDFGGTSVWYHIHQG-GKVFWLIPPTAHNLE--LYENWL--LSGSQGD-------IFLGDRV--- 262 (451)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEES-CEEEEEECCCHHHHH--HHHHHH--HTTCCSS-------SCHHHHS---
T ss_pred eEEEEccCCCCCCeEECCCCcchhhheecc-eEEEEEeCCCccccc--cccccc--ccccchh-------hhhcccc---
Confidence 389999999999999999888888888888 699999999985421 111100 0001111 1122221
Q ss_pred CCceeeeecCCCcEEEEcCCccceeecccccceeeccccCCCcccchhHHHHHHHhc--CCCCCcc-HHHHHHHHHHh
Q 039459 468 GVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAIELYREQ--GRKTSIS-HDKLLLGAARE 542 (727)
Q Consensus 468 GIpv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~Wl~~g~~a~~~y~~~--~~~~~~s-~d~LL~~~A~~ 542 (727)
-..++++++|||.|++-.|=+|++.|..-+++...||.+..=++.-....+.=... ...-.|+ ++.|+|-+|..
T Consensus 263 -~~~~~v~l~pGE~LfIPsGWwH~V~nledsIait~NF~~~~nl~~~l~~~~~E~~~~v~~~~~~p~f~~~~w~~~~~ 339 (451)
T 2yu1_A 263 -SDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLER 339 (451)
T ss_dssp -SCCEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCSSSHHHHHHHHHHHHHTTCCTTSSCTTHHHHHHHHHHH
T ss_pred -ccceEEEECCCcEEEeCCCceEEEecCCCeEEEeeeeCCcccHHHHHHHHHHHHhhCCCccccCccHHHHHHHHHHH
Confidence 25689999999999999999999999999999999999988776554443322222 3334454 45677777654
No 14
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=97.53 E-value=8.8e-05 Score=79.77 Aligned_cols=122 Identities=16% Similarity=0.145 Sum_probs=85.3
Q ss_pred cceEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCchhhhhchhhhcccccccCcccccc
Q 039459 387 VPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKS 466 (727)
Q Consensus 387 ~P~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p~~~~~~pd~L~h~~~~isP~~L~~ 466 (727)
.-|+++|..+|.+.+|.+.....+++.+..| .|.|+.+|+.....+-..-............+++.. .-|..-..
T Consensus 173 ~~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G-~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~----~~P~~~~~ 247 (336)
T 3k2o_A 173 YRWFVMGPPRSGTGIHIDPLGTSAWNALVQG-HKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNV----IYPRTQLP 247 (336)
T ss_dssp CEEEEEECTTCEEEEECCGGGCEEEEEEEES-CEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHH----TGGGGGST
T ss_pred ceEEEECCCCccCCcccCCCccceeeEEEee-eEEEEEeCCCcchhcccCcccccCCCccchhhhhhh----hCcchhhh
Confidence 4589999999999999999888888988888 599999999975433210000000000001111110 11221111
Q ss_pred ---CCCceeeeecCCCcEEEEcCCccceeecccccceeeccccCCCcccc
Q 039459 467 ---EGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPH 513 (727)
Q Consensus 467 ---~GIpv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~Wl~~ 513 (727)
.+.+.+.++|+|||.+++-+|-+|.+.|.+-+++-+.||.....++.
T Consensus 248 ~~p~~~~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~nl~~ 297 (336)
T 3k2o_A 248 TWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPV 297 (336)
T ss_dssp TSCGGGCCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTTHHH
T ss_pred cccccCceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCcccHHH
Confidence 25688999999999999999999999999999999999999876654
No 15
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=97.25 E-value=0.0006 Score=67.43 Aligned_cols=108 Identities=15% Similarity=0.090 Sum_probs=72.5
Q ss_pred cceEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCchhhhhchhhhcccccccCccc---
Q 039459 387 VPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSP--- 463 (727)
Q Consensus 387 ~P~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p~~~~~~pd~L~h~~~~isP~~--- 463 (727)
.+++++|..+|.+.+|.+.. .+++.+..| .|.|..+|+.+...+ +|........ ...+-...|+.
T Consensus 125 ~~~~wiG~~gs~t~~H~D~~--~n~~~qv~G-~K~w~L~pP~~~~~l-------~~~~~~~~~~--~s~vd~~~~d~~~~ 192 (235)
T 4gjz_A 125 TINAWFGPQGTISPLHQDPQ--QNFLVQVMG-RKYIRLYSPQESGAL-------YPHDTHLLHN--TSQVDVENPDLEKF 192 (235)
T ss_dssp EEEEEEECTTCEEEEECCSS--EEEEEEEES-CEEEEEECGGGGGGS-------CBCSSTTTTT--BBSSCTTSCCTTTC
T ss_pred ceEEEEeCCCCCceeeeccc--cceEEEEee-eEeeEEcCccccccc-------ccCcccccCc--cccccccCcchhhC
Confidence 46899999999999998764 456667777 699999999885432 2211000000 00011111111
Q ss_pred cccCCCceeeeecCCCcEEEEcCCccceeecccccceeecccc
Q 039459 464 LKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFA 506 (727)
Q Consensus 464 L~~~GIpv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA 506 (727)
=.-.+++.+.++|+|||.+++=+|-+|.+.|.+.+++.+++|+
T Consensus 193 p~~~~~~~~~~~l~pGD~LyiP~gW~H~V~~l~~sisvn~w~s 235 (235)
T 4gjz_A 193 PKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 235 (235)
T ss_dssp GGGGGCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEC
T ss_pred ccccCCCcEEEEECCCCEEEeCCCCcEEEEECCCEEEEEEecC
Confidence 0113467899999999999999999999999998887666653
No 16
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=97.02 E-value=0.0012 Score=74.56 Aligned_cols=139 Identities=15% Similarity=-0.031 Sum_probs=94.8
Q ss_pred ceEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCchhhhhchhhhcccccccCccccccC
Q 039459 388 PRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLKSE 467 (727)
Q Consensus 388 P~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p~~~~~~pd~L~h~~~~isP~~L~~~ 467 (727)
-|+++|+.+|.+.+|++-......+++..| -|+||-+||..... . +.+... ..++ ...+ -+..+
T Consensus 298 rf~lmg~~gS~Td~HiD~~gts~w~~v~~G-rK~w~L~PPt~~nl-~-~y~~w~-----~s~~----~~~w-fgd~l--- 361 (528)
T 3pur_A 298 QFCLAGMAGSYTDFHVDFGGSSVYYHILKG-EKIFYIAAPTEQNF-A-AYQAHE-----TSPD----TTTW-FGDIA--- 361 (528)
T ss_dssp SEEEEECTTEEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHH-H-HHHHHH-----HSSC----CSCC-GGGGT---
T ss_pred EEEEEeCCCCCCCeeECCCCCceeEEEecc-eEEEEEeCCCccch-h-hhhhhc-----cCCc----hhhh-hcccc---
Confidence 489999999999999998888778888888 79999999986431 1 111110 1111 1111 11222
Q ss_pred CCceeeeecCCCcEEEEcCCccceeecccccceeeccccCCCcccchhHHH--HHHH--hcCC--CCCcc-HHHHHHHHH
Q 039459 468 GVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEWLPHGQNAI--ELYR--EQGR--KTSIS-HDKLLLGAA 540 (727)
Q Consensus 468 GIpv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~Wl~~g~~a~--~~y~--~~~~--~~~~s-~d~LL~~~A 540 (727)
...+++++|+|||.+++-+|-+|+++|.--+++..-||.+..=|+...... +.+. ..+. .-.|+ .+.++|-.+
T Consensus 362 ~~~~~~v~l~pGEtlfIPsGW~HaV~tleDSIaiggNFl~~~nl~~qlri~~iE~~~~k~~~~~~kf~fp~F~~v~W~y~ 441 (528)
T 3pur_A 362 NGAVKRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYHLENAIRKEIRSEEKFYFPNFELLHWMYM 441 (528)
T ss_dssp TTCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCGGGHHHHHHHHHHHHHHHHHCCCTTCCCCTTHHHHHHHHH
T ss_pred cccEEEEEECCCCEEEecCCceEEEecCCCeEEEcCcccchhhHHHHHHHHHHHHhhhhccCCCccccCcCHHHHHHHHH
Confidence 235678999999999999999999999999999999999987776554433 3222 1222 22465 456667666
Q ss_pred Hh
Q 039459 541 RE 542 (727)
Q Consensus 541 ~~ 542 (727)
..
T Consensus 442 ~~ 443 (528)
T 3pur_A 442 RN 443 (528)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 17
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.28 E-value=0.013 Score=63.00 Aligned_cols=110 Identities=16% Similarity=0.034 Sum_probs=73.9
Q ss_pred cccceEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCchhhhhchhhhcc-cccccCccc
Q 039459 385 LLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNR-WVASLSPSP 463 (727)
Q Consensus 385 vt~P~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p~~~~~~pd~L~h-~~~~isP~~ 463 (727)
+.+.+|++|..+|.+.+|.+.+ ..++.+..| .|.|..+|+.+...+ +|.... .+ .-.+ .+-+-.|+.
T Consensus 182 ~~~~~l~iG~~gs~t~~H~D~~--~n~~~qv~G-~K~~~L~pP~~~~~l-------y~~~~~-~~-~~~~s~vd~~~~d~ 249 (349)
T 3d8c_A 182 LTSNLLLIGMEGNVTPAHYGEQ--QNFFAQIKG-YKRCILFPPDQFECL-------YPYPVH-HP-CDRQSQVDFDNPDY 249 (349)
T ss_dssp EEECEEEEECTTCEEEEECCSE--EEEEEEEES-CEEEEEECGGGHHHH-------CBBCTT-ST-TBTBBCSCTTSCCT
T ss_pred cccceEEEECCCCCccceECCh--hcEEEEEec-eEEEEEeCcchhhhh-------cccccc-CC-CCCcccccCCCcch
Confidence 4567899999999999999765 566777778 799999999986543 221000 00 0000 011111210
Q ss_pred ---cccCCCceeeeecCCCcEEEEcCCccceeeccc-ccceeecccc
Q 039459 464 ---LKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCG-FNCSESVNFA 506 (727)
Q Consensus 464 ---L~~~GIpv~r~vQ~pGEfVvTfP~aYH~gfn~G-fN~aEAVNFA 506 (727)
-.-..++.+.++++|||.+++-+|-+|.+.|.+ -.++-||||-
T Consensus 250 ~~~p~~~~~~~~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w 296 (349)
T 3d8c_A 250 ERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFW 296 (349)
T ss_dssp TTCGGGGGCCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEE
T ss_pred hhCcccccCCcEEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEEE
Confidence 011245789999999999999999999999997 4667777763
No 18
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.81 E-value=0.016 Score=62.06 Aligned_cols=111 Identities=9% Similarity=0.055 Sum_probs=75.1
Q ss_pred cccceEEeeccCCcccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCchhhh-hchhhhcccccccCccc
Q 039459 385 LLVPRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSF-KQSKWHNRWVASLSPSP 463 (727)
Q Consensus 385 vt~P~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p~~~~-~~pd~L~h~~~~isP~~ 463 (727)
+...++++|...+.+.+|.+.+ ..++.+-.| .|.|..+|+.+...+ ++.--. ...++ .....-.-|.
T Consensus 166 ~~~s~l~~g~~g~~~~~H~D~~--~n~~~qv~G-~K~w~L~pP~~~~~l-------y~~~~~~~~~d~-~~~d~~~~p~- 233 (338)
T 3al5_A 166 FFSSVFRISSPGLQLWTHYDVM--DNLLIQVTG-KKRVVLFSPRDAQYL-------YLKGTKSEVLNI-DNPDLAKYPL- 233 (338)
T ss_dssp EEEEEEEEECTTCEEEEECCSS--EEEEEECSS-CEEEEEECGGGGGGG-------TEETTEESCCCS-SSCCTTTCTT-
T ss_pred cccceeEECCCCCCccceECCc--ccEEEEEEE-EEEEEEECccccccc-------ccCCCCcccccC-CCcchhhCcc-
Confidence 4457899999999999998775 355556677 799999999875332 221000 00000 0000001121
Q ss_pred cccCCCceeeeecCCCcEEEEcCCccceeecccccceeeccccCCC
Q 039459 464 LKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIE 509 (727)
Q Consensus 464 L~~~GIpv~r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~ 509 (727)
+. +.+.+.++++|||.+++=+|-+|.+.|.+.+++-+++|....
T Consensus 234 ~~--~~~~~~~~L~pGD~LyiP~gWwH~v~~l~~sisvn~~~~~~~ 277 (338)
T 3al5_A 234 FS--KARRYECSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHLP 277 (338)
T ss_dssp GG--GCCEEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECSSC
T ss_pred cc--cCCCEEEEECCCCEEEECCCCeEEEeeCCCEEEEEEEecCCc
Confidence 11 357899999999999999999999999999998888886643
No 19
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=86.21 E-value=1.7 Score=46.52 Aligned_cols=115 Identities=11% Similarity=0.096 Sum_probs=71.3
Q ss_pred ceEEeeccCCcccceecCCCceeeeeeeeCCcceEEee-ChhhHHHHHHHHHHhCchhhhh----chhhhcccccccCcc
Q 039459 388 PRLHVGMCFTSIYWKVEEHCLCSLYYMHLGAPKIWHSI-PQRYAVKFDAAAKKYLPTLSFK----QSKWHNRWVASLSPS 462 (727)
Q Consensus 388 P~LyiGm~fStf~WH~ED~~l~SINY~H~GapK~WY~V-P~~~~~kfE~l~~~~~p~~~~~----~pd~L~h~~~~isP~ 462 (727)
+.+|+|-..+.+..|.+.+. .+..+-.| .|.|... |+.....+ .+.-... ..++..-..- --|.
T Consensus 143 ~~~~~gp~g~~~~~H~D~~d--nfl~Qv~G-~Krw~L~~~P~~~~~l-------~~~~~~~~~~~~~~~~~~~~~-~~p~ 211 (342)
T 1vrb_A 143 AIVYAAKNGGGFKAHFDAYT--NLIFQIQG-EKTWKLAKNENVSNPM-------QHYDLSEAPYYPDDLQSYWKG-DPPK 211 (342)
T ss_dssp EEEEEECSSCCCCSEECSSE--EEEEEEES-CEEEEEECCSSCSSCS-------SCEECC----CCHHHHHHCCS-CCCC
T ss_pred ceEEEeCCCCCCCCeECChh--cEEEEEEE-EEEEEEecCCcccccc-------Ccccccccccccccccccchh-hccc
Confidence 44899988889999997764 33344456 7999999 77632110 1100000 0000000000 0011
Q ss_pred ccccCCCceeeeecCCCcEEEEcCCccceeeccc--ccceeeccccCCCcccchhHHH
Q 039459 463 PLKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCG--FNCSESVNFAPIEWLPHGQNAI 518 (727)
Q Consensus 463 ~L~~~GIpv~r~vQ~pGEfVvTfP~aYH~gfn~G--fN~aEAVNFA~~~Wl~~g~~a~ 518 (727)
+ ...+.+.++-+|||.++.-+|.+|.+.+.| -+++-+++ .++|..+-..+.
T Consensus 212 -~--~~~~~~~~~L~pGD~LyiP~gwwH~v~s~~~~~slsvsi~--~~~~~dll~~~l 264 (342)
T 1vrb_A 212 -E--DLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG--QPAWLDLMLAAL 264 (342)
T ss_dssp -T--TCCSSEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEEC--CCBHHHHHHHHH
T ss_pred -c--ccCCceEEEECCCcEEEeCCCccEEEEECCCCceEEEEEC--CCcHHHHHHHHH
Confidence 1 226789999999999999999999999994 67777777 678887655443
No 20
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=69.07 E-value=14 Score=41.61 Aligned_cols=106 Identities=12% Similarity=0.093 Sum_probs=74.5
Q ss_pred cceEEeeccCCc-ccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCchhhhhchhhhcccccccCccccc
Q 039459 387 VPRLHVGMCFTS-IYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSPLK 465 (727)
Q Consensus 387 ~P~LyiGm~fSt-f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p~~~~~~pd~L~h~~~~isP~~L~ 465 (727)
.-.+|++-.++. |.-|.++++. +..+-.| .|.|...++.+... .+|.. ...+ +.+.
T Consensus 165 ~~N~Y~tp~Gs~g~~pH~D~~Dv--FllQv~G-~KrWrL~~P~~~~~-------~lp~~--~~~~--------~~~~--- 221 (489)
T 4diq_A 165 GSNVYLTPPNSQGFAPHYDDIEA--FVLQLEG-RKLWRVYRPRAPTE-------ELALT--SSPN--------FSQD--- 221 (489)
T ss_dssp EEEEEEECSSBCCSCCBCCSSEE--EEEEEEE-CEEEEEECCSSGGG-------TTCSS--CCCC--------CCGG---
T ss_pred cceEEecCCCcccccCccCCcce--EEEEEee-EEEEEEeCCCCccc-------cCCCc--cccc--------CCcc---
Confidence 346899988874 7889999764 4455667 69999999876431 23321 1111 1121
Q ss_pred cCCCceeeeecCCCcEEEEcCCccceeecc--cccceeeccccC-CCcccchh
Q 039459 466 SEGVPVYRCTQSPGEFVLVFSGSYYSGFDC--GFNCSESVNFAP-IEWLPHGQ 515 (727)
Q Consensus 466 ~~GIpv~r~vQ~pGEfVvTfP~aYH~gfn~--GfN~aEAVNFA~-~~Wl~~g~ 515 (727)
+.+-+++.++-+||+.++.-||.+|.+.+. ++++.-++.+.. .+|.++-.
T Consensus 222 ~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~~~~tw~dll~ 274 (489)
T 4diq_A 222 DLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQRNTWGDFLE 274 (489)
T ss_dssp GCCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEECTTCBHHHHHH
T ss_pred cccCcceEEEECCCCEEEECCCCceEEEecCCCceEEEeecccCcccHHHHHH
Confidence 236689999999999999999999999998 467777777653 67876543
No 21
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=38.59 E-value=83 Score=34.71 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=66.1
Q ss_pred cccceEEeeccCCc-ccceecCCCceeeeeeeeCCcceEEeeChhhHHHHHHHHHHhCchhhhhchhhhcccccccCccc
Q 039459 385 LLVPRLHVGMCFTS-IYWKVEEHCLCSLYYMHLGAPKIWHSIPQRYAVKFDAAAKKYLPTLSFKQSKWHNRWVASLSPSP 463 (727)
Q Consensus 385 vt~P~LyiGm~fSt-f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~p~~~~~~pd~L~h~~~~isP~~ 463 (727)
.....+|+|-.++. |.-|.++++. +-.+-.| .|.|...|+.. -+|. +...- .|.
T Consensus 138 ~~~~n~y~~~~g~~g~~~H~D~~dv--f~~Qv~G-~Krw~l~~p~~----------pl~~----------~~s~d-~~~- 192 (442)
T 2xdv_A 138 LVGSNVYITPAGSQGLPPHYDDVEV--FILQLEG-EKHWRLYHPTV----------PLAR----------EYSVE-AEE- 192 (442)
T ss_dssp CCEEEEEEECTTCBCSCSEECSSEE--EEEEEES-CEEEEEECCSS----------TTCS----------SCEEC-CTT-
T ss_pred CcccceEECCCCCCCccceECCcce--EEEEEEe-EEEEEEccCCC----------Cccc----------cCCCC-chh-
Confidence 34567899988875 5899977543 3334456 79999999864 1121 00000 111
Q ss_pred cccCCCceeeeecCCCcEEEEcCCccceeeccc-ccceeeccc---cCCCcccchh
Q 039459 464 LKSEGVPVYRCTQSPGEFVLVFSGSYYSGFDCG-FNCSESVNF---APIEWLPHGQ 515 (727)
Q Consensus 464 L~~~GIpv~r~vQ~pGEfVvTfP~aYH~gfn~G-fN~aEAVNF---A~~~Wl~~g~ 515 (727)
+.|-+.+.++-+||+.++.-||.+|.+.+.+ -..+-.+.| ....|.++-.
T Consensus 193 --~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~~~~~SlhlT~~~~~~~~w~~~l~ 246 (442)
T 2xdv_A 193 --RIGRPVHEFMLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLL 246 (442)
T ss_dssp --TSCSCSEEEEECTTCEEEECTTCEEEEECCSSSCCEEEEEEEECTTCSHHHHHH
T ss_pred --hcCCcceEEEECCCcEEEECCCceEEEEecCCCcceeeccccccccchHHHHHH
Confidence 2356789999999999999999999999875 222222222 3356776543
No 22
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=29.21 E-value=37 Score=28.77 Aligned_cols=38 Identities=18% Similarity=0.461 Sum_probs=29.0
Q ss_pred CCcccccccccccccccccCccCCccccccchh-hhcCCCC
Q 039459 608 SKRECNICLYDLHLSAAFCPCSPDIYSCLNHVK-QLCSCAW 647 (727)
Q Consensus 608 ~~~~C~~Ck~~~flS~V~C~c~~~~~~CL~Ha~-~lC~C~~ 647 (727)
....|..|+.-+-|..+.|.|. .++|..|-- +...|.-
T Consensus 24 ~~~RC~~C~kkvgL~~f~CrCg--~~FCs~HRy~e~H~C~f 62 (74)
T 1wfp_A 24 TATRCLSCNKKVGVTGFKCRCG--STFCGTHRYPESHECQF 62 (74)
T ss_dssp CCCBCSSSCCBCTTTCEECTTS--CEECTTTCSTTTSCCCS
T ss_pred cCccchhhcCcccccceEeccC--CEeccccCCCcCCCCcC
Confidence 4678999999988888899885 589999953 2345653
No 23
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=29.09 E-value=21 Score=29.49 Aligned_cols=38 Identities=21% Similarity=0.641 Sum_probs=28.7
Q ss_pred CCcccccccccccccccccCccCCccccccchh-hhcCCCC
Q 039459 608 SKRECNICLYDLHLSAAFCPCSPDIYSCLNHVK-QLCSCAW 647 (727)
Q Consensus 608 ~~~~C~~Ck~~~flS~V~C~c~~~~~~CL~Ha~-~lC~C~~ 647 (727)
....|..|+.-+-|..+.|.|. .++|..|-- +...|+-
T Consensus 14 ~~~rC~~C~kkvgl~~f~CrCg--~~FC~~HRy~e~H~C~f 52 (64)
T 1wfh_A 14 RPNRCTVCRKRVGLTGFMCRCG--TTFCGSHRYPEVHGCTF 52 (64)
T ss_dssp SCCCCTTTCCCCCTTCEECSSS--CEECTTTCSTTTTTCCC
T ss_pred cCCcChhhCCccCccCEEeecC--CEeccccCCcccCCCCc
Confidence 3578999999888888899875 589999953 2345653
No 24
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=26.98 E-value=24 Score=30.67 Aligned_cols=36 Identities=22% Similarity=0.511 Sum_probs=27.3
Q ss_pred Cccccccccccccc-ccccCccCCccccccchh-hhcCCC
Q 039459 609 KRECNICLYDLHLS-AAFCPCSPDIYSCLNHVK-QLCSCA 646 (727)
Q Consensus 609 ~~~C~~Ck~~~flS-~V~C~c~~~~~~CL~Ha~-~lC~C~ 646 (727)
...|..|+.-+-|. .+.|.|. .++|..|-- +...|.
T Consensus 25 ~~rC~~C~kkvgl~~~f~CrCg--~~FC~~HRy~e~H~C~ 62 (85)
T 1wff_A 25 MKHCFLCGKKTGLATSFECRCG--NNFCASHRYAEAHGCN 62 (85)
T ss_dssp CCBCSSSCCBCSSSSCEECTTC--CEECTTTCSTGGGTCC
T ss_pred CccchhhCCeecccCCeEcCCC--CEecccCCCccCCCCc
Confidence 57899999988885 7889975 589999952 234565
No 25
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=26.06 E-value=24 Score=29.07 Aligned_cols=37 Identities=19% Similarity=0.466 Sum_probs=28.0
Q ss_pred CcccccccccccccccccCccCCccccccchh-hhcCCCC
Q 039459 609 KRECNICLYDLHLSAAFCPCSPDIYSCLNHVK-QLCSCAW 647 (727)
Q Consensus 609 ~~~C~~Ck~~~flS~V~C~c~~~~~~CL~Ha~-~lC~C~~ 647 (727)
...|..|+.-+-|..+.|.|. .++|..|-- +...|.-
T Consensus 15 ~~rC~~C~kkvgl~~f~CrCg--~~FC~~HR~~e~H~C~f 52 (64)
T 1wg2_A 15 NNRCFSCNKKVGVMGFKCKCG--STFCGSHRYPEKHECSF 52 (64)
T ss_dssp SCSCTTTCCCCTTSCEECTTS--CEECSSSCSSTTTTCCC
T ss_pred CCcChhhCCcccccCeEeecC--CEecccCCCccccCCCc
Confidence 578999999888888889875 589999953 2345653
No 26
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=21.85 E-value=38 Score=28.69 Aligned_cols=36 Identities=25% Similarity=0.512 Sum_probs=27.5
Q ss_pred CcccccccccccccccccCccCCccccccchh-hhcCCC
Q 039459 609 KRECNICLYDLHLSAAFCPCSPDIYSCLNHVK-QLCSCA 646 (727)
Q Consensus 609 ~~~C~~Ck~~~flS~V~C~c~~~~~~CL~Ha~-~lC~C~ 646 (727)
...|..|+.-+=|..+.|.|. .++|..|-. +.-.|.
T Consensus 25 ~nRC~~CrKkvgL~gf~CrCg--~~FCs~HRy~e~H~C~ 61 (74)
T 1wfl_A 25 KNRCFMCRKKVGLTGFDCRCG--NLFCGLHRYSDKHNCP 61 (74)
T ss_dssp TTBCSSSCCBCGGGCEECTTS--CEECSSSCSTTTTTCC
T ss_pred CCcChhhCCcccccCeecCCC--CEechhcCCCccCCCc
Confidence 568999999888888899975 589999953 234564
No 27
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=21.72 E-value=57 Score=27.21 Aligned_cols=38 Identities=16% Similarity=0.068 Sum_probs=28.2
Q ss_pred eeecCCCcEEEEcCCccceeecccccceeeccccCCCc
Q 039459 473 RCTQSPGEFVLVFSGSYYSGFDCGFNCSESVNFAPIEW 510 (727)
Q Consensus 473 r~vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNFA~~~W 510 (727)
...-.||++++.-|+..|...|.|-.-...+.+..+.+
T Consensus 63 ~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~~~ 100 (113)
T 2gu9_A 63 TQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHPPA 100 (113)
T ss_dssp EEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEESCC
T ss_pred EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCC
Confidence 34568999999999999999998865555555544433
No 28
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=20.97 E-value=55 Score=28.08 Aligned_cols=44 Identities=14% Similarity=-0.037 Sum_probs=27.4
Q ss_pred ecCCCcEEEEcCCccceeecccccceeeccc--cCCCcccchhHHH
Q 039459 475 TQSPGEFVLVFSGSYYSGFDCGFNCSESVNF--APIEWLPHGQNAI 518 (727)
Q Consensus 475 vQ~pGEfVvTfP~aYH~gfn~GfN~aEAVNF--A~~~Wl~~g~~a~ 518 (727)
.-.||++++.-|+.-|+..|.|-.-.+.+.+ ..+.++--.++++
T Consensus 69 ~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~ 114 (117)
T 2b8m_A 69 NYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPHPKKLNAPEDPI 114 (117)
T ss_dssp EEETTCEEEECTTCEEEEECCSSSEEEEEEEECSCGGGGCC-----
T ss_pred EeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCCCCCCcccccc
Confidence 4579999999999999999988654444433 3444443333333
Done!