Your job contains 1 sequence.
>039464
MQELRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPR
LLPWLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLK
AYSKCENSADIISVQNDWLSQQSRVPKVPSDVEGVDSNEDEASSDASDDVLPPLEKNMNH
MNLLESDGEESE
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039464
(192 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2184128 - symbol:AT5G10070 "AT5G10070" species... 727 6.7e-72 1
MGI|MGI:1915577 - symbol:Tsr3 "TSR3 20S rRNA accumulation... 416 6.1e-39 1
UNIPROTKB|D4A6X9 - symbol:RGD1565744 "Probable ribosome b... 404 1.1e-37 1
UNIPROTKB|A5PK98 - symbol:C25H16ORF42 "Probable ribosome ... 398 4.9e-37 1
UNIPROTKB|F1RFZ6 - symbol:TSR3 "Probable ribosome biogene... 398 4.9e-37 1
UNIPROTKB|F1PWP9 - symbol:TSR3 "Probable ribosome biogene... 394 1.3e-36 1
ZFIN|ZDB-GENE-040718-63 - symbol:tsr3 "TSR3, 20S rRNA acc... 391 2.7e-36 1
UNIPROTKB|Q9UJK0 - symbol:TSR3 "Ribosome biogenesis prote... 379 5.1e-35 1
CGD|CAL0002246 - symbol:orf19.5802 species:5476 "Candida ... 359 6.7e-33 1
UNIPROTKB|Q5A0K9 - symbol:TSR3 "Ribosome biogenesis prote... 359 6.7e-33 1
ASPGD|ASPL0000028004 - symbol:AN5711 species:162425 "Emer... 345 2.0e-31 1
WB|WBGene00018679 - symbol:F52C12.2 species:6239 "Caenorh... 343 3.3e-31 1
SGD|S000005532 - symbol:TSR3 "Protein required for 20S pr... 339 8.8e-31 1
DICTYBASE|DDB_G0267822 - symbol:DDB_G0267822 "UPF0293 pro... 335 2.3e-30 1
POMBASE|SPAC1F3.04c - symbol:tsr3 "SSU-rRNA maturation pr... 329 1.0e-29 1
UNIPROTKB|G4NE08 - symbol:TSR3 "Ribosome biogenesis prote... 301 9.4e-27 1
>TAIR|locus:2184128 [details] [associations]
symbol:AT5G10070 "AT5G10070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] HAMAP:MF_01116
Pfam:PF04068 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
InterPro:IPR007209 GO:GO:0006364 KO:K09140 InterPro:IPR007177
InterPro:IPR022968 PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638
OMA:CSWEEVE IPI:IPI00539103 RefSeq:NP_974761.1 UniGene:At.1622
PRIDE:F4KFG2 EnsemblPlants:AT5G10070.2 GeneID:830871
KEGG:ath:AT5G10070 PhylomeDB:F4KFG2 Uniprot:F4KFG2
Length = 266
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 139/197 (70%), Positives = 162/197 (82%)
Query: 1 MQELRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPR 60
++ELRV++GFGG+VLSPVG CVS+EDY LIKRKGLAVVDCSWARL DVPF KLRC+APR
Sbjct: 70 LKELRVNTGFGGVVLSPVGRQCVSREDYDLIKRKGLAVVDCSWARLTDVPFAKLRCTAPR 129
Query: 61 LLPWLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLK 120
LLPWLVAANPVNYGRPCELSCVEALSAALI+CGE+ETA LLLGKFKWGHAFLSLN+++LK
Sbjct: 130 LLPWLVAANPVNYGRPCELSCVEALSAALILCGEKETAELLLGKFKWGHAFLSLNKDILK 189
Query: 121 AYSKCENSADIISVQNDWLSQQSRVPKVPSDVE---GVXXXXXXXXXXXXXXV--LPPLE 175
YSKCENSA+IISVQN WL+QQ+++PK P +E V LPPLE
Sbjct: 190 EYSKCENSAEIISVQNSWLTQQTQIPKQPPALEERKDVKKDGESGDESEEDDEDGLPPLE 249
Query: 176 KNMNHMNLLESDGEESE 192
+NMNH+ L +S+ E+SE
Sbjct: 250 RNMNHIKLEDSEEEDSE 266
>MGI|MGI:1915577 [details] [associations]
symbol:Tsr3 "TSR3 20S rRNA accumulation" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] HAMAP:MF_01116
MGI:MGI:1915577 Pfam:PF04068 InterPro:IPR007209 GO:GO:0006364
CTD:115939 eggNOG:COG2042 HOVERGEN:HBG063013 KO:K09140 OMA:LQAEQEF
OrthoDB:EOG4QRH50 InterPro:IPR007177 InterPro:IPR022968
PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638 EMBL:AK002309
EMBL:AK158743 EMBL:AK170074 EMBL:BC089019 IPI:IPI00121172
RefSeq:NP_001157190.1 RefSeq:NP_080952.2 UniGene:Mm.180687
ProteinModelPortal:Q5HZH2 STRING:Q5HZH2 PhosphoSite:Q5HZH2
PRIDE:Q5HZH2 DNASU:68327 Ensembl:ENSMUST00000063574 GeneID:68327
KEGG:mmu:68327 UCSC:uc008baf.2 GeneTree:ENSGT00390000014665
InParanoid:Q5HZH2 NextBio:327001 Bgee:Q5HZH2
CleanEx:MM_0610007P22RIK Genevestigator:Q5HZH2 Uniprot:Q5HZH2
Length = 323
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 82/153 (53%), Positives = 104/153 (67%)
Query: 4 LRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPRLLP 63
LR+S FGG+VLSPVGT VS D L+ + G+AV+DCSWA+L D PF K+R S RLLP
Sbjct: 87 LRLSQRFGGLVLSPVGTEYVSPADRQLVAQSGVAVIDCSWAKLDDTPFQKMRGSHLRLLP 146
Query: 64 WLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLKAYS 123
+LVAANPVNYGRPC+LSCVEA +AA I G + A +LL KFKWG FL LNRELL Y+
Sbjct: 147 YLVAANPVNYGRPCKLSCVEAFAAAFCIVGFSDLAVILLRKFKWGKGFLDLNRELLDKYA 206
Query: 124 KCENSADIISVQNDWLSQQSRVPKV---PSDVE 153
C +++ + +L+ P+ P DV+
Sbjct: 207 ACRGPEEVLQAEQGYLASTRDTPEEDIDPFDVD 239
>UNIPROTKB|D4A6X9 [details] [associations]
symbol:RGD1565744 "Probable ribosome biogenesis protein
C16orf42 homolog" species:10116 "Rattus norvegicus" [GO:0006364
"rRNA processing" evidence=IEA] HAMAP:MF_01116 Pfam:PF04068
InterPro:IPR007209 EMBL:CH473948 GO:GO:0006364 CTD:115939 KO:K09140
OrthoDB:EOG4QRH50 InterPro:IPR007177 InterPro:IPR022968
PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638
GeneTree:ENSGT00390000014665 IPI:IPI00952419 RefSeq:NP_001101738.1
UniGene:Rn.219246 Ensembl:ENSRNOT00000068336 GeneID:360494
KEGG:rno:360494 NextBio:672962 Uniprot:D4A6X9
Length = 263
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 77/144 (53%), Positives = 100/144 (69%)
Query: 4 LRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPRLLP 63
LR+S FGG+VLSPVGT VS D L+ + G+AV+DCSWA+L + PF K+R S RLLP
Sbjct: 26 LRLSQRFGGLVLSPVGTQYVSPADRQLVAQSGIAVIDCSWAKLDETPFGKMRGSHLRLLP 85
Query: 64 WLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLKAYS 123
+LVAANPVNYGRPC+LSCVEA +AA I G + A +LL KFKWG FL LNR+LL Y+
Sbjct: 86 YLVAANPVNYGRPCKLSCVEAFAAAFCIVGFSDLAVILLRKFKWGKGFLDLNRQLLDKYA 145
Query: 124 KCENSADIISVQNDWLSQQSRVPK 147
C +++ + +L+ P+
Sbjct: 146 ACCGPEEVLEAEQGYLASTKDTPE 169
>UNIPROTKB|A5PK98 [details] [associations]
symbol:C25H16ORF42 "Probable ribosome biogenesis protein
C16orf42 homolog" species:9913 "Bos taurus" [GO:0006364 "rRNA
processing" evidence=IEA] HAMAP:MF_01116 Pfam:PF04068
InterPro:IPR007209 GO:GO:0006364 CTD:115939 eggNOG:COG2042
HOVERGEN:HBG063013 KO:K09140 OMA:LQAEQEF OrthoDB:EOG4QRH50
InterPro:IPR007177 InterPro:IPR022968 PANTHER:PTHR20426
Pfam:PF04034 ProDom:PD016638 GeneTree:ENSGT00390000014665
HOGENOM:HOG000227039 EMBL:DAAA02057299 EMBL:BC142410
IPI:IPI00693340 RefSeq:NP_001092381.1 UniGene:Bt.16488
STRING:A5PK98 Ensembl:ENSBTAT00000018749 GeneID:508714
KEGG:bta:508714 InParanoid:A5PK98 NextBio:20868648 Uniprot:A5PK98
Length = 315
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 76/144 (52%), Positives = 99/144 (68%)
Query: 4 LRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPRLLP 63
LR+ FGG+VLSPVG+ VS D L+ + G+AV+DCSWARL + PF K+R S RLLP
Sbjct: 87 LRLGHRFGGLVLSPVGSQYVSPADRHLVAQSGVAVIDCSWARLDETPFGKMRGSHLRLLP 146
Query: 64 WLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLKAYS 123
LVAANPVNYGRPC LSCVEA +A I G + A +LL KFKWG FL LNR+LL Y+
Sbjct: 147 HLVAANPVNYGRPCRLSCVEAFAATFCILGFSDLAVILLRKFKWGKGFLDLNRQLLDKYA 206
Query: 124 KCENSADIISVQNDWLSQQSRVPK 147
C + +++ + ++L+Q P+
Sbjct: 207 ACSSPEEVLQAEQEFLAQAKEHPE 230
>UNIPROTKB|F1RFZ6 [details] [associations]
symbol:TSR3 "Probable ribosome biogenesis protein C16orf42
homolog" species:9823 "Sus scrofa" [GO:0006364 "rRNA processing"
evidence=IEA] HAMAP:MF_01116 Pfam:PF04068 InterPro:IPR007209
GO:GO:0006364 KO:K09140 OMA:LQAEQEF InterPro:IPR007177
InterPro:IPR022968 PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638
GeneTree:ENSGT00390000014665 EMBL:FP340344 RefSeq:XP_003124772.2
Ensembl:ENSSSCT00000008799 GeneID:100515431 KEGG:ssc:100515431
Uniprot:F1RFZ6
Length = 316
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 77/144 (53%), Positives = 97/144 (67%)
Query: 4 LRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPRLLP 63
LR+ FGG+VLSPVG+ VS D L+ + G+AV+DCSWARL + PF K+R S RLLP
Sbjct: 87 LRLGQRFGGLVLSPVGSQYVSPADRQLVAQSGVAVIDCSWARLNETPFGKMRGSHLRLLP 146
Query: 64 WLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLKAYS 123
LVAANPVNYGRPC LSCVEA +A I G + A LLL KFKWG FL LNRELL Y+
Sbjct: 147 HLVAANPVNYGRPCRLSCVEAFAATFCILGFSDLAVLLLRKFKWGKGFLDLNRELLDKYA 206
Query: 124 KCENSADIISVQNDWLSQQSRVPK 147
C +++ + ++L+ P+
Sbjct: 207 ACSGPEEVLQAEQEFLALAKEHPE 230
>UNIPROTKB|F1PWP9 [details] [associations]
symbol:TSR3 "Probable ribosome biogenesis protein C16orf42
homolog" species:9615 "Canis lupus familiaris" [GO:0006364 "rRNA
processing" evidence=IEA] HAMAP:MF_01116 Pfam:PF04068
InterPro:IPR007209 GO:GO:0006364 CTD:115939 KO:K09140 OMA:LQAEQEF
InterPro:IPR007177 InterPro:IPR022968 PANTHER:PTHR20426
Pfam:PF04034 ProDom:PD016638 GeneTree:ENSGT00390000014665
EMBL:AAEX03004647 EMBL:AAEX03004648 EMBL:AAEX03004649
RefSeq:XP_537015.1 Ensembl:ENSCAFT00000031131 GeneID:479890
KEGG:cfa:479890 Uniprot:F1PWP9
Length = 312
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 76/144 (52%), Positives = 99/144 (68%)
Query: 4 LRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPRLLP 63
LR+ FGG+VLSPVG+ VS D L+ + G+AV+DCSWARL + PF K+R S RLLP
Sbjct: 87 LRLGQRFGGLVLSPVGSQYVSCADRQLVAQCGVAVIDCSWARLNETPFGKMRGSHLRLLP 146
Query: 64 WLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLKAYS 123
LVAANPVNYGRPC+LSCVEA +A L I G + A +LL KFKWG FL LNR+LL Y+
Sbjct: 147 HLVAANPVNYGRPCKLSCVEAFAATLCILGFSDLAIILLRKFKWGKGFLDLNRQLLDKYA 206
Query: 124 KCENSADIISVQNDWLSQQSRVPK 147
C +++ + ++L+ P+
Sbjct: 207 ACSGPEEVLQAEQEFLAHARERPE 230
>ZFIN|ZDB-GENE-040718-63 [details] [associations]
symbol:tsr3 "TSR3, 20S rRNA accumulation, homolog
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] HAMAP:MF_01116
Pfam:PF04068 ZFIN:ZDB-GENE-040718-63 InterPro:IPR007209
GO:GO:0006364 CTD:115939 eggNOG:COG2042 HOVERGEN:HBG063013
KO:K09140 OrthoDB:EOG4QRH50 InterPro:IPR007177 InterPro:IPR022968
PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638 HOGENOM:HOG000227039
EMBL:BC075886 IPI:IPI00484264 RefSeq:NP_001002370.1
UniGene:Dr.18499 STRING:Q6DHT1 PRIDE:Q6DHT1 GeneID:436643
KEGG:dre:436643 InParanoid:Q6DHT1 NextBio:20831088
ArrayExpress:Q6DHT1 Bgee:Q6DHT1 Uniprot:Q6DHT1
Length = 297
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 75/151 (49%), Positives = 106/151 (70%)
Query: 4 LRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPRLLP 63
LR++ F G++LSP+GT V+ D ++ GLAV+DCSWARL D PF K+ S PRLLP
Sbjct: 86 LRLNQRFNGLILSPMGTKYVTPADREIVAHGGLAVIDCSWARLEDTPFSKMIGSHPRLLP 145
Query: 64 WLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLKAYS 123
+LVAANPVNYG+PC+LSCVEA +A I G + A LLL KFKWG FL LN+ LL+ Y+
Sbjct: 146 YLVAANPVNYGKPCKLSCVEAYAATFCIVGFRDLAVLLLRKFKWGLGFLELNKTLLERYA 205
Query: 124 KCENSADIISVQNDWLSQQSRVPKV-PSDVE 153
++ ++++V+ ++LS + ++ P DV+
Sbjct: 206 SSQSEEELLAVEKEFLSATPQEEEIDPFDVD 236
>UNIPROTKB|Q9UJK0 [details] [associations]
symbol:TSR3 "Ribosome biogenesis protein TSR3 homolog"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] HAMAP:MF_01116 Pfam:PF04068 InterPro:IPR007209
EMBL:AE006467 EMBL:AL031709 GO:GO:0006364 EMBL:BC013943
EMBL:BC016699 EMBL:BC017325 IPI:IPI00011693 PIR:T45061
RefSeq:NP_001001410.1 UniGene:Hs.134846 ProteinModelPortal:Q9UJK0
STRING:Q9UJK0 PhosphoSite:Q9UJK0 DMDM:74753359 PaxDb:Q9UJK0
PRIDE:Q9UJK0 Ensembl:ENST00000007390 GeneID:115939 KEGG:hsa:115939
UCSC:uc002cll.3 CTD:115939 GeneCards:GC16M001400 HGNC:HGNC:14175
HPA:HPA046265 neXtProt:NX_Q9UJK0 PharmGKB:PA25558 eggNOG:COG2042
HOVERGEN:HBG063013 InParanoid:Q9UJK0 KO:K09140 OMA:LQAEQEF
OrthoDB:EOG4QRH50 PhylomeDB:Q9UJK0 GenomeRNAi:115939 NextBio:79710
Bgee:Q9UJK0 CleanEx:HS_C16orf42 Genevestigator:Q9UJK0
InterPro:IPR007177 InterPro:IPR022968 PANTHER:PTHR20426
Pfam:PF04034 ProDom:PD016638 Uniprot:Q9UJK0
Length = 312
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 73/144 (50%), Positives = 96/144 (66%)
Query: 4 LRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPRLLP 63
LR+ FGG+VLSPVG S D L+ + G+AV+DCSWARL + PF K+R S RLLP
Sbjct: 87 LRLGHRFGGLVLSPVGKQYASPADRQLVAQSGVAVIDCSWARLDETPFGKMRGSHLRLLP 146
Query: 64 WLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLKAYS 123
+LVAANPVNYGRP LSCVEA +A I G + A +LL KFKWG FL LNR+LL Y+
Sbjct: 147 YLVAANPVNYGRPYRLSCVEAFAATFCIVGFPDLAVILLRKFKWGKGFLDLNRQLLDKYA 206
Query: 124 KCENSADIISVQNDWLSQQSRVPK 147
C + +++ + ++L+ P+
Sbjct: 207 ACGSPEEVLQAEQEFLANAKESPQ 230
>CGD|CAL0002246 [details] [associations]
symbol:orf19.5802 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030490
"maturation of SSU-rRNA" evidence=IEA] HAMAP:MF_01116
CGD:CAL0002246 Pfam:PF04068 GO:GO:0005634 GO:GO:0005737
InterPro:IPR007209 GO:GO:0006364 EMBL:AACQ01000088
EMBL:AACQ01000087 eggNOG:COG2042 KO:K09140 InterPro:IPR007177
InterPro:IPR022968 PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638
RefSeq:XP_715278.1 RefSeq:XP_715343.1 STRING:Q5A0K9 GeneID:3643022
GeneID:3643096 KEGG:cal:CaO19.13224 KEGG:cal:CaO19.5802
Uniprot:Q5A0K9
Length = 346
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 69/141 (48%), Positives = 89/141 (63%)
Query: 1 MQELRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPR 60
++ LRV F GIV+SP G V D +++ G AVV+CSWARL ++PF K+ R
Sbjct: 77 IKNLRVGQKFQGIVVSPNGKSIVCPNDKEIVETNGAAVVECSWARLDEIPFNKIGGKNER 136
Query: 61 LLPWLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLK 120
LLP+LVAANPVNYGRP L+CVEAL+A I G + A LLL F WG FL +N EL++
Sbjct: 137 LLPYLVAANPVNYGRPWRLNCVEALAACFAIVGHTDWAELLLSNFSWGLTFLKINEELIE 196
Query: 121 AYSKCENSADIISVQNDWLSQ 141
Y +C +S I Q WL +
Sbjct: 197 LYQQCTDSESITKAQEQWLEK 217
>UNIPROTKB|Q5A0K9 [details] [associations]
symbol:TSR3 "Ribosome biogenesis protein TSR3"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] HAMAP:MF_01116 CGD:CAL0002246
Pfam:PF04068 GO:GO:0005634 GO:GO:0005737 InterPro:IPR007209
GO:GO:0006364 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG2042
KO:K09140 InterPro:IPR007177 InterPro:IPR022968 PANTHER:PTHR20426
Pfam:PF04034 ProDom:PD016638 RefSeq:XP_715278.1 RefSeq:XP_715343.1
STRING:Q5A0K9 GeneID:3643022 GeneID:3643096 KEGG:cal:CaO19.13224
KEGG:cal:CaO19.5802 Uniprot:Q5A0K9
Length = 346
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 69/141 (48%), Positives = 89/141 (63%)
Query: 1 MQELRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPR 60
++ LRV F GIV+SP G V D +++ G AVV+CSWARL ++PF K+ R
Sbjct: 77 IKNLRVGQKFQGIVVSPNGKSIVCPNDKEIVETNGAAVVECSWARLDEIPFNKIGGKNER 136
Query: 61 LLPWLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLK 120
LLP+LVAANPVNYGRP L+CVEAL+A I G + A LLL F WG FL +N EL++
Sbjct: 137 LLPYLVAANPVNYGRPWRLNCVEALAACFAIVGHTDWAELLLSNFSWGLTFLKINEELIE 196
Query: 121 AYSKCENSADIISVQNDWLSQ 141
Y +C +S I Q WL +
Sbjct: 197 LYQQCTDSESITKAQEQWLEK 217
>ASPGD|ASPL0000028004 [details] [associations]
symbol:AN5711 species:162425 "Emericella nidulans"
[GO:0030490 "maturation of SSU-rRNA" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] HAMAP:MF_01116
Pfam:PF04068 GO:GO:0005634 GO:GO:0005737 InterPro:IPR007209
EMBL:BN001305 GO:GO:0006364 InterPro:IPR007177 InterPro:IPR022968
PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638 HOGENOM:HOG000227039
EnsemblFungi:CADANIAT00003351 OMA:MVRHKKD Uniprot:C8VFM9
Length = 370
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 64/144 (44%), Positives = 94/144 (65%)
Query: 1 MQELRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPR 60
M+EL + F G+V+SP VS D L+++ G AVV+CSW R+ +VP+ ++ R
Sbjct: 64 MRELAIGQKFQGVVVSPNAKRVVSPADRDLLEQYGAAVVECSWVRVKEVPWSRIGGKCER 123
Query: 61 LLPWLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLK 120
LLP+L+AAN VNYG+P L+CVEAL+A ICG E+ A +L F++G AFL +N +LLK
Sbjct: 124 LLPYLIAANTVNYGKPWRLNCVEALAACFYICGHEDWAQEVLKHFRYGEAFLEINSQLLK 183
Query: 121 AYSKCENSADIISVQNDWLSQQSR 144
Y+ CE D+ + +WL++ R
Sbjct: 184 RYAACETEEDVKRTEEEWLAKIER 207
>WB|WBGene00018679 [details] [associations]
symbol:F52C12.2 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] HAMAP:MF_01116
Pfam:PF04068 InterPro:IPR007209 GO:GO:0019915 GO:GO:0006364
eggNOG:COG2042 KO:K09140 InterPro:IPR007177 InterPro:IPR022968
PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638
GeneTree:ENSGT00390000014665 HOGENOM:HOG000227039 EMBL:FO081438
RefSeq:NP_741332.1 ProteinModelPortal:Q95X18 STRING:Q95X18
PaxDb:Q95X18 EnsemblMetazoa:F52C12.2.1 EnsemblMetazoa:F52C12.2.2
GeneID:176995 KEGG:cel:CELE_F52C12.2 UCSC:F52C12.2 CTD:176995
WormBase:F52C12.2 InParanoid:Q95X18 OMA:CSWEEVE NextBio:894904
Uniprot:Q95X18
Length = 261
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 61/139 (43%), Positives = 91/139 (65%)
Query: 3 ELRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPRLL 62
E+++ F G+VLSP GT+ ++ D +++ GL VVDCSW + P +++ RLL
Sbjct: 89 EVKLGQRFPGLVLSPTGTYTLAPRDRPFVEQNGLCVVDCSWKEVERTPLHRVKAPEHRLL 148
Query: 63 PWLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLKAY 122
P+LVAAN VNYG+PC L+C EA++A L I G +E A+ L+ F WG F+ LN+ELL Y
Sbjct: 149 PYLVAANSVNYGKPCHLTCAEAMAAGLYILGFQEAASRLMKPFSWGDHFIELNKELLDLY 208
Query: 123 SKCENSADIISVQNDWLSQ 141
+ C+ D+I QN++L +
Sbjct: 209 AACDTPEDVIRAQNEYLER 227
>SGD|S000005532 [details] [associations]
symbol:TSR3 "Protein required for 20S pre-rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0030490 "maturation
of SSU-rRNA" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
HAMAP:MF_01116 SGD:S000005532 Pfam:PF04068 GO:GO:0005634
GO:GO:0005737 EMBL:BK006948 InterPro:IPR007209 EMBL:U43491
GO:GO:0030490 eggNOG:COG2042 KO:K09140 InterPro:IPR007177
InterPro:IPR022968 PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638
GeneTree:ENSGT00390000014665 OrthoDB:EOG4FR41Q EMBL:Z74914
PIR:S61990 RefSeq:NP_014648.1 ProteinModelPortal:Q12094
DIP:DIP-1251N IntAct:Q12094 MINT:MINT-395199 STRING:Q12094
PaxDb:Q12094 EnsemblFungi:YOR006C GeneID:854167 KEGG:sce:YOR006C
CYGD:YOR006c OMA:VGQKFQG NextBio:975953 Genevestigator:Q12094
GermOnline:YOR006C Uniprot:Q12094
Length = 313
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 66/141 (46%), Positives = 91/141 (64%)
Query: 1 MQELRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPR 60
++ LRV F GIV+SP G V +D ++++ G +VV+CSWARL +VPF K+ R
Sbjct: 72 IKSLRVGQKFQGIVVSPNGKGVVCPDDLEIVEQHGASVVECSWARLEEVPFNKIGGKHER 131
Query: 61 LLPWLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLK 120
LLP+LVAAN VNYGRP L+CVEAL+A I G + A+ LL F WG FL LN+ELL+
Sbjct: 132 LLPYLVAANQVNYGRPWRLNCVEALAACFAIVGRMDWASELLSHFSWGMGFLELNKELLE 191
Query: 121 AYSKCENSADIISVQNDWLSQ 141
Y +C + + + +WL +
Sbjct: 192 IYQQCTDCDSVKRAEEEWLQK 212
>DICTYBASE|DDB_G0267822 [details] [associations]
symbol:DDB_G0267822 "UPF0293 protein C16orf42"
species:44689 "Dictyostelium discoideum" [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] HAMAP:MF_01116 dictyBase:DDB_G0267822 Pfam:PF04068
EMBL:AAFI02000003 InterPro:IPR007209 GO:GO:0006364 eggNOG:COG2042
KO:K09140 InterPro:IPR007177 InterPro:IPR022968 PANTHER:PTHR20426
Pfam:PF04034 ProDom:PD016638 RefSeq:XP_647334.1 STRING:Q55G49
PRIDE:Q55G49 EnsemblProtists:DDB0189570 GeneID:8616144
KEGG:ddi:DDB_G0267822 InParanoid:Q55G49 OMA:HICDERD Uniprot:Q55G49
Length = 365
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 57/141 (40%), Positives = 97/141 (68%)
Query: 1 MQELRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPR 60
++ + ++ F GIVL+P +S D +++ G++VVDCSWA++ +PF K++ R
Sbjct: 89 VKSINLTHKFKGIVLTPSAKQSISPADRDIVQNLGVSVVDCSWAKVDSIPFGKMKGGHDR 148
Query: 61 LLPWLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLK 120
LLP+L+AANPVNYG+P +L+CVEA++A L I G + +LG FKWG +F +N++L +
Sbjct: 149 LLPFLIAANPVNYGKPFKLTCVEAVAACLFITGFTAEGHQVLGGFKWGSSFYKVNKDLFE 208
Query: 121 AYSKCENSADIISVQNDWLSQ 141
Y C NS +++ +QN+++++
Sbjct: 209 KYILCANSQEVVQIQNEFIAK 229
>POMBASE|SPAC1F3.04c [details] [associations]
symbol:tsr3 "SSU-rRNA maturation protein Tsr3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0046872
"metal ion binding" evidence=ISM] HAMAP:MF_01116
PomBase:SPAC1F3.04c Pfam:PF04068 GO:GO:0005634 GO:GO:0005737
EMBL:CU329670 GO:GO:0046872 InterPro:IPR007209 GO:GO:0030490
eggNOG:COG2042 KO:K09140 InterPro:IPR007177 InterPro:IPR022968
PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638 PIR:T38075
RefSeq:NP_593007.1 STRING:Q10409 EnsemblFungi:SPAC1F3.04c.1
GeneID:2542142 KEGG:spo:SPAC1F3.04c HOGENOM:HOG000227039
OMA:THEEDIW OrthoDB:EOG4FR41Q NextBio:20803214 Uniprot:Q10409
Length = 288
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 61/141 (43%), Positives = 89/141 (63%)
Query: 1 MQELRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPR 60
++ LR+ F G+V++P G VS D G +VV+CSWAR+ ++PF ++ R
Sbjct: 53 VRNLRIGQKFRGVVITPNGKVPVSPADKEYFDNGGASVVECSWARIEEIPFSRIGGRCER 112
Query: 61 LLPWLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLK 120
LLP+LVA+NPVNYGRP L+C EAL+A + I G A LL+ FKWGH+F +N ELL
Sbjct: 113 LLPYLVASNPVNYGRPWRLNCAEALAACMYIVGYPNEARLLMDNFKWGHSFFEVNEELLD 172
Query: 121 AYSKCENSADIISVQNDWLSQ 141
Y++C ++ DI + +L +
Sbjct: 173 IYAQCHDAQDIQEKEKKYLEE 193
>UNIPROTKB|G4NE08 [details] [associations]
symbol:TSR3 "Ribosome biogenesis protein TSR3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008150
"biological_process" evidence=ISS] HAMAP:MF_01116 Pfam:PF04068
GO:GO:0005634 GO:GO:0005737 EMBL:CM001235 InterPro:IPR007209
GO:GO:0006364 KO:K09140 InterPro:IPR007177 InterPro:IPR022968
PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638
RefSeq:XP_003718127.1 EnsemblFungi:MGG_00851T0 GeneID:2674813
KEGG:mgr:MGG_00851 Uniprot:G4NE08
Length = 425
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 59/144 (40%), Positives = 89/144 (61%)
Query: 1 MQELRVSSGFGGIVLSPVGTHCVSKEDYSLIKRKGLAVVDCSWARLGDVPFVKLRCSAPR 60
M+ L + G++++P G VS D +++ G AVV+CSWAR +V + ++ R
Sbjct: 83 MRPLSLGQRHQGVIVTPNGKTVVSPADRETLEQHGAAVVECSWARTKEVQWSRVGGRCER 142
Query: 61 LLPWLVAANPVNYGRPCELSCVEALSAALIICGEEETANLLLGKFKWGHAFLSLNRELLK 120
LLP+LVAAN VNYG+P L+CVEAL+AA ICG E A +L F +G AFL +N LLK
Sbjct: 143 LLPYLVAANTVNYGKPWRLNCVEALAAAFAICGRLEWAAQILEPFSYGAAFLEINAALLK 202
Query: 121 AYSKCENSADIISVQNDWLSQQSR 144
Y+ C ++ ++ + +W+ + R
Sbjct: 203 RYAACADADEVKKTEEEWMEKLER 226
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 192 178 0.00086 109 3 11 22 0.44 32
31 0.39 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 602 (64 KB)
Total size of DFA: 171 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.65u 0.10s 14.75t Elapsed: 00:00:01
Total cpu time: 14.65u 0.10s 14.75t Elapsed: 00:00:01
Start: Sat May 11 02:40:01 2013 End: Sat May 11 02:40:02 2013