Query 039466
Match_columns 263
No_of_seqs 187 out of 1123
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 16:59:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039466.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039466hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sgz_A Hydroxyacid oxidase 2; 100.0 7E-73 2.4E-77 521.2 22.0 252 5-263 2-264 (352)
2 2nzl_A Hydroxyacid oxidase 1; 100.0 2.2E-62 7.6E-67 459.0 21.5 262 2-263 24-299 (392)
3 2nli_A Lactate oxidase; flavoe 100.0 1.3E-61 4.6E-66 450.6 20.0 257 3-263 11-276 (368)
4 1p4c_A L(+)-mandelate dehydrog 100.0 4.7E-60 1.6E-64 442.0 23.9 262 1-263 1-272 (380)
5 1gox_A (S)-2-hydroxy-acid oxid 100.0 4.9E-59 1.7E-63 433.8 23.8 259 4-262 3-271 (370)
6 1kbi_A Cytochrome B2, L-LCR; f 100.0 1.4E-58 4.8E-63 446.1 21.8 258 3-263 120-390 (511)
7 3sr7_A Isopentenyl-diphosphate 100.0 6.2E-32 2.1E-36 250.3 7.8 183 42-262 54-270 (365)
8 2qr6_A IMP dehydrogenase/GMP r 100.0 2.8E-32 9.6E-37 255.2 5.2 220 17-262 14-260 (393)
9 1vcf_A Isopentenyl-diphosphate 100.0 5.1E-32 1.7E-36 248.3 4.6 196 24-262 8-248 (332)
10 1p0k_A Isopentenyl-diphosphate 99.9 2.4E-28 8.2E-33 225.1 9.4 181 41-262 22-243 (349)
11 3vkj_A Isopentenyl-diphosphate 99.9 4.1E-28 1.4E-32 225.2 9.2 171 42-252 27-235 (368)
12 3r2g_A Inosine 5'-monophosphat 99.9 3.7E-25 1.3E-29 204.3 11.7 157 43-252 9-177 (361)
13 1ypf_A GMP reductase; GUAC, pu 99.9 3.5E-24 1.2E-28 196.6 11.5 179 35-256 7-189 (336)
14 2c6q_A GMP reductase 2; TIM ba 99.9 6.2E-23 2.1E-27 189.4 10.2 173 36-262 14-213 (351)
15 1eep_A Inosine 5'-monophosphat 99.8 1.4E-18 4.9E-23 162.8 11.0 190 42-246 10-224 (404)
16 3khj_A Inosine-5-monophosphate 99.3 1.2E-11 4.2E-16 114.2 13.6 148 43-248 14-177 (361)
17 1gte_A Dihydropyrimidine dehyd 99.3 9.8E-12 3.4E-16 128.6 12.4 161 48-245 519-736 (1025)
18 4fo4_A Inosine 5'-monophosphat 99.2 6.7E-11 2.3E-15 109.4 9.0 146 43-244 15-177 (366)
19 1f76_A Dihydroorotate dehydrog 99.1 8.6E-10 3E-14 100.4 12.5 172 59-250 42-252 (336)
20 1ea0_A Glutamate synthase [NAD 99.1 7.2E-11 2.4E-15 123.8 5.5 186 43-262 824-1050(1479)
21 3ffs_A Inosine-5-monophosphate 99.0 1.7E-09 5.8E-14 101.0 11.0 70 43-120 11-82 (400)
22 2e6f_A Dihydroorotate dehydrog 99.0 1.4E-09 4.8E-14 98.0 8.4 149 60-249 2-200 (314)
23 1vhn_A Putative flavin oxidore 98.8 6.1E-09 2.1E-13 94.3 8.5 152 70-261 2-177 (318)
24 1ofd_A Ferredoxin-dependent gl 98.8 2.5E-09 8.6E-14 112.5 6.1 64 43-112 841-906 (1520)
25 1ep3_A Dihydroorotate dehydrog 98.7 1.8E-08 6.1E-13 90.2 8.0 149 57-245 2-197 (311)
26 1jub_A Dihydroorotate dehydrog 98.7 6.6E-08 2.3E-12 86.9 11.0 150 62-252 2-202 (311)
27 1wv2_A Thiazole moeity, thiazo 98.6 4.1E-08 1.4E-12 86.0 6.9 100 125-245 117-217 (265)
28 1vrd_A Inosine-5'-monophosphat 98.5 7.2E-08 2.5E-12 92.1 6.0 58 204-261 265-329 (494)
29 2gjl_A Hypothetical protein PA 98.4 1.9E-06 6.6E-11 78.0 11.5 39 205-245 108-146 (328)
30 2z6i_A Trans-2-enoyl-ACP reduc 98.4 1.3E-06 4.3E-11 79.5 9.4 124 64-249 6-144 (332)
31 1jcn_A Inosine monophosphate d 98.2 2.9E-06 9.7E-11 81.5 8.4 47 204-250 283-330 (514)
32 1me8_A Inosine-5'-monophosphat 98.1 3.3E-06 1.1E-10 80.9 7.1 59 204-262 270-336 (503)
33 3bo9_A Putative nitroalkan dio 98.1 1.6E-05 5.6E-10 72.0 11.0 53 206-262 115-169 (326)
34 3bw2_A 2-nitropropane dioxygen 98.0 7.4E-05 2.5E-09 68.6 13.9 47 204-252 134-185 (369)
35 3usb_A Inosine-5'-monophosphat 97.9 6.5E-06 2.2E-10 79.1 5.0 45 205-249 285-330 (511)
36 1zfj_A Inosine monophosphate d 97.9 1.8E-05 6E-10 75.4 6.7 46 204-249 261-307 (491)
37 4ef8_A Dihydroorotate dehydrog 97.8 8.2E-05 2.8E-09 68.3 9.8 157 50-247 25-231 (354)
38 4avf_A Inosine-5'-monophosphat 97.8 1.7E-05 5.9E-10 75.7 5.0 56 205-260 258-320 (490)
39 1xm3_A Thiazole biosynthesis p 97.7 6.3E-05 2.2E-09 66.2 7.1 43 204-246 166-209 (264)
40 3b0p_A TRNA-dihydrouridine syn 97.6 0.00021 7.2E-09 65.3 9.7 148 88-244 69-225 (350)
41 1ka9_F Imidazole glycerol phos 97.6 0.00026 8.9E-09 61.0 9.7 43 203-245 183-226 (252)
42 4fxs_A Inosine-5'-monophosphat 97.6 4.7E-05 1.6E-09 72.9 5.0 41 205-245 260-301 (496)
43 3b0p_A TRNA-dihydrouridine syn 97.5 0.00048 1.6E-08 62.9 10.7 139 71-245 2-165 (350)
44 3i65_A Dihydroorotate dehydrog 97.5 0.00044 1.5E-08 64.6 10.3 37 216-252 268-311 (415)
45 3tdn_A FLR symmetric alpha-bet 97.5 0.00042 1.5E-08 59.8 9.3 44 202-245 65-109 (247)
46 2w6r_A Imidazole glycerol phos 97.5 0.00067 2.3E-08 58.9 10.3 43 203-245 187-230 (266)
47 1thf_D HISF protein; thermophI 97.4 0.00093 3.2E-08 57.5 10.3 44 202-245 181-225 (253)
48 1ypf_A GMP reductase; GUAC, pu 97.4 0.00071 2.4E-08 61.4 9.9 125 88-245 104-240 (336)
49 3zwt_A Dihydroorotate dehydrog 97.4 0.0028 9.4E-08 58.3 13.7 35 215-249 219-260 (367)
50 3q58_A N-acetylmannosamine-6-p 97.3 0.00082 2.8E-08 57.9 9.0 42 202-244 168-210 (229)
51 1tv5_A Dhodehase, dihydroorota 97.3 0.0037 1.3E-07 58.9 14.1 50 204-253 276-340 (443)
52 3igs_A N-acetylmannosamine-6-p 97.3 0.00097 3.3E-08 57.5 9.2 41 203-244 169-210 (232)
53 1qo2_A Molecule: N-((5-phospho 97.3 0.00074 2.5E-08 57.9 8.3 43 203-245 175-224 (241)
54 3tdn_A FLR symmetric alpha-bet 97.3 0.00023 7.9E-09 61.4 4.9 42 203-244 187-229 (247)
55 1thf_D HISF protein; thermophI 97.2 0.0012 4.3E-08 56.7 8.6 41 204-244 62-103 (253)
56 2uva_G Fatty acid synthase bet 97.2 0.00077 2.6E-08 74.0 8.7 157 49-262 558-748 (2060)
57 2htm_A Thiazole biosynthesis p 97.2 0.0018 6E-08 56.9 9.3 42 204-245 164-208 (268)
58 3tjx_A Dihydroorotate dehydrog 97.2 0.0022 7.6E-08 58.4 10.4 37 208-244 268-306 (354)
59 1h5y_A HISF; histidine biosynt 97.1 0.0028 9.7E-08 53.8 10.2 43 203-245 185-228 (253)
60 3nav_A Tryptophan synthase alp 97.1 0.00057 1.9E-08 60.4 5.8 40 206-245 198-238 (271)
61 1y0e_A Putative N-acetylmannos 97.1 0.0041 1.4E-07 52.4 11.0 117 88-249 22-151 (223)
62 1ka9_F Imidazole glycerol phos 97.1 0.00065 2.2E-08 58.4 6.0 41 204-244 63-104 (252)
63 4af0_A Inosine-5'-monophosphat 97.1 0.01 3.5E-07 57.0 14.4 44 205-248 310-354 (556)
64 3zwt_A Dihydroorotate dehydrog 97.1 0.00073 2.5E-08 62.2 6.4 42 204-245 284-328 (367)
65 2y88_A Phosphoribosyl isomeras 97.1 0.0018 6E-08 55.4 8.4 44 202-245 179-226 (244)
66 1qop_A Tryptophan synthase alp 97.1 0.0035 1.2E-07 54.9 10.5 43 204-246 193-236 (268)
67 1vhn_A Putative flavin oxidore 97.1 0.00079 2.7E-08 60.5 6.4 138 88-245 70-214 (318)
68 2w6r_A Imidazole glycerol phos 97.0 0.002 6.9E-08 55.8 8.5 44 203-246 61-105 (266)
69 2y88_A Phosphoribosyl isomeras 97.0 0.003 1E-07 54.0 9.4 39 206-244 64-103 (244)
70 1vzw_A Phosphoribosyl isomeras 97.0 0.0017 5.9E-08 55.6 7.9 44 202-245 176-223 (244)
71 3vnd_A TSA, tryptophan synthas 97.0 0.0014 4.7E-08 57.8 7.1 41 205-245 195-236 (267)
72 2z6i_A Trans-2-enoyl-ACP reduc 97.0 0.004 1.4E-07 56.2 10.3 43 202-244 148-191 (332)
73 1p0k_A Isopentenyl-diphosphate 96.9 0.0017 6E-08 58.9 7.6 43 203-245 237-281 (349)
74 1jvn_A Glutamine, bifunctional 96.9 0.0028 9.5E-08 61.4 9.3 75 132-248 454-532 (555)
75 2cu0_A Inosine-5'-monophosphat 96.9 0.00038 1.3E-08 66.2 3.0 37 205-243 257-293 (486)
76 1qo2_A Molecule: N-((5-phospho 96.9 0.0025 8.5E-08 54.6 7.9 42 202-244 60-102 (241)
77 2agk_A 1-(5-phosphoribosyl)-5- 96.9 0.0017 5.7E-08 57.0 6.8 47 203-249 188-245 (260)
78 1vc4_A Indole-3-glycerol phosp 96.9 0.0018 6.3E-08 56.5 7.0 82 117-244 51-135 (254)
79 1mzh_A Deoxyribose-phosphate a 96.9 0.0053 1.8E-07 52.5 9.7 44 201-244 158-204 (225)
80 1vzw_A Phosphoribosyl isomeras 96.9 0.004 1.4E-07 53.2 9.1 39 206-244 65-104 (244)
81 3oix_A Putative dihydroorotate 96.9 0.0034 1.2E-07 57.3 9.0 41 204-244 261-304 (345)
82 2gjl_A Hypothetical protein PA 96.9 0.0048 1.6E-07 55.5 9.8 43 203-245 159-202 (328)
83 3kts_A Glycerol uptake operon 96.9 0.00066 2.3E-08 57.0 3.8 46 201-246 135-181 (192)
84 2nli_A Lactate oxidase; flavoe 96.9 0.0023 8E-08 58.8 7.7 43 202-244 268-313 (368)
85 1h5y_A HISF; histidine biosynt 96.8 0.0023 7.9E-08 54.4 7.1 41 204-244 65-106 (253)
86 3bo9_A Putative nitroalkan dio 96.8 0.005 1.7E-07 55.5 9.7 43 203-245 163-206 (326)
87 3qja_A IGPS, indole-3-glycerol 96.8 0.001 3.5E-08 58.8 4.9 84 115-243 55-141 (272)
88 3tsm_A IGPS, indole-3-glycerol 96.8 0.0015 5.3E-08 57.7 5.9 42 204-245 108-150 (272)
89 3bw2_A 2-nitropropane dioxygen 96.8 0.0091 3.1E-07 54.6 11.2 41 204-244 196-237 (369)
90 3qja_A IGPS, indole-3-glycerol 96.8 0.0023 7.9E-08 56.5 6.9 42 204-245 199-243 (272)
91 4ef8_A Dihydroorotate dehydrog 96.8 0.0016 5.4E-08 59.7 5.8 43 203-245 263-307 (354)
92 1f76_A Dihydroorotate dehydrog 96.8 0.0023 7.8E-08 57.7 6.7 41 204-244 275-318 (336)
93 3sgz_A Hydroxyacid oxidase 2; 96.7 0.0033 1.1E-07 57.5 7.7 44 202-245 256-302 (352)
94 1ujp_A Tryptophan synthase alp 96.7 0.003 1E-07 55.7 7.2 40 204-245 190-230 (271)
95 3f4w_A Putative hexulose 6 pho 96.7 0.0085 2.9E-07 50.0 9.6 40 204-244 146-187 (211)
96 3o07_A Pyridoxine biosynthesis 96.7 0.001 3.5E-08 58.7 3.8 44 202-245 184-230 (291)
97 3gr7_A NADPH dehydrogenase; fl 96.7 0.0093 3.2E-07 54.1 10.3 44 201-244 262-307 (340)
98 1yad_A Regulatory protein TENI 96.7 0.018 6.2E-07 48.4 11.5 43 202-245 150-193 (221)
99 1z41_A YQJM, probable NADH-dep 96.7 0.0092 3.1E-07 54.0 10.2 43 202-244 263-307 (338)
100 4avf_A Inosine-5'-monophosphat 96.5 0.0091 3.1E-07 56.8 9.5 120 90-245 229-362 (490)
101 2gou_A Oxidoreductase, FMN-bin 96.5 0.011 3.7E-07 54.2 9.7 41 203-244 280-322 (365)
102 4fxs_A Inosine-5'-monophosphat 96.5 0.024 8.2E-07 54.0 12.2 119 91-245 232-364 (496)
103 1tv5_A Dhodehase, dihydroorota 96.5 0.01 3.4E-07 55.9 9.3 90 129-244 310-402 (443)
104 1vyr_A Pentaerythritol tetrani 96.5 0.013 4.6E-07 53.6 10.0 41 203-244 281-323 (364)
105 3q58_A N-acetylmannosamine-6-p 96.4 0.013 4.4E-07 50.3 8.8 114 85-248 32-160 (229)
106 4fo4_A Inosine 5'-monophosphat 96.4 0.034 1.2E-06 51.0 12.1 118 91-245 109-241 (366)
107 2nzl_A Hydroxyacid oxidase 1; 96.4 0.006 2.1E-07 56.5 7.1 43 202-244 291-336 (392)
108 1jcn_A Inosine monophosphate d 96.4 0.0069 2.4E-07 57.8 7.7 122 91-245 256-388 (514)
109 3khj_A Inosine-5-monophosphate 96.4 0.017 5.9E-07 52.8 10.0 118 92-245 107-237 (361)
110 3ffs_A Inosine-5-monophosphate 96.3 0.024 8.3E-07 52.6 10.9 117 92-244 146-275 (400)
111 1eep_A Inosine 5'-monophosphat 96.3 0.023 7.8E-07 52.6 10.7 118 91-244 154-285 (404)
112 1p4c_A L(+)-mandelate dehydrog 96.3 0.005 1.7E-07 56.8 6.1 43 203-245 265-308 (380)
113 3igs_A N-acetylmannosamine-6-p 96.3 0.018 6E-07 49.5 9.1 117 85-248 32-160 (232)
114 3i65_A Dihydroorotate dehydrog 96.3 0.0042 1.4E-07 58.0 5.3 42 204-245 331-375 (415)
115 3r2g_A Inosine 5'-monophosphat 96.2 0.026 9E-07 51.7 10.5 120 88-244 98-228 (361)
116 1gox_A (S)-2-hydroxy-acid oxid 96.2 0.016 5.3E-07 53.2 8.9 43 203-245 265-310 (370)
117 3usb_A Inosine-5'-monophosphat 96.2 0.024 8.3E-07 54.2 10.6 119 91-245 257-389 (511)
118 3hgj_A Chromate reductase; TIM 96.2 0.027 9.1E-07 51.2 10.1 44 201-244 273-318 (349)
119 3l5l_A Xenobiotic reductase A; 96.2 0.02 6.8E-07 52.4 9.3 43 202-244 281-325 (363)
120 1xi3_A Thiamine phosphate pyro 96.2 0.019 6.7E-07 47.6 8.5 45 201-245 147-191 (215)
121 3oix_A Putative dihydroorotate 96.1 0.022 7.4E-07 51.9 9.3 42 60-107 36-77 (345)
122 3w01_A Heptaprenylglyceryl pho 96.1 0.0063 2.1E-07 52.6 5.2 41 204-245 173-215 (235)
123 3vk5_A MOEO5; TIM barrel, tran 96.1 0.0089 3E-07 52.9 6.3 45 202-246 211-258 (286)
124 3vzx_A Heptaprenylglyceryl pho 96.0 0.0095 3.3E-07 51.2 5.8 42 204-246 167-210 (228)
125 2r14_A Morphinone reductase; H 96.0 0.025 8.5E-07 52.1 9.0 41 204-244 287-328 (377)
126 3tsm_A IGPS, indole-3-glycerol 96.0 0.12 4.1E-06 45.4 13.0 43 203-245 205-250 (272)
127 4e38_A Keto-hydroxyglutarate-a 95.9 0.03 1E-06 48.2 8.7 69 127-243 43-112 (232)
128 1kbi_A Cytochrome B2, L-LCR; f 95.9 0.023 7.9E-07 54.4 8.5 42 204-245 384-433 (511)
129 1jub_A Dihydroorotate dehydrog 95.8 0.0096 3.3E-07 52.9 5.5 42 204-245 228-272 (311)
130 1y0e_A Putative N-acetylmannos 95.8 0.012 4.2E-07 49.4 5.8 41 204-244 163-204 (223)
131 1ep3_A Dihydroorotate dehydrog 95.8 0.0099 3.4E-07 52.5 5.4 41 205-245 230-271 (311)
132 4gj1_A 1-(5-phosphoribosyl)-5- 95.7 0.051 1.7E-06 46.9 9.4 135 93-245 66-225 (243)
133 2ekc_A AQ_1548, tryptophan syn 95.7 0.014 4.7E-07 51.0 5.7 39 206-245 196-235 (262)
134 1viz_A PCRB protein homolog; s 95.7 0.013 4.5E-07 50.7 5.4 41 204-245 169-211 (240)
135 1vrd_A Inosine-5'-monophosphat 95.6 0.073 2.5E-06 50.3 10.9 117 92-244 239-369 (494)
136 2e6f_A Dihydroorotate dehydrog 95.6 0.011 3.7E-07 52.6 4.8 42 204-245 231-274 (314)
137 3lab_A Putative KDPG (2-keto-3 95.5 0.066 2.3E-06 45.6 9.1 68 127-242 22-90 (217)
138 2f6u_A GGGPS, (S)-3-O-geranylg 95.5 0.013 4.5E-07 50.5 4.6 41 204-245 177-219 (234)
139 2qr6_A IMP dehydrogenase/GMP r 95.3 0.1 3.5E-06 47.9 10.6 43 204-246 255-308 (393)
140 1yxy_A Putative N-acetylmannos 95.3 0.024 8.2E-07 48.0 5.7 43 202-245 173-216 (234)
141 1icp_A OPR1, 12-oxophytodienoa 95.0 0.042 1.4E-06 50.5 6.8 41 204-244 289-330 (376)
142 3lab_A Putative KDPG (2-keto-3 94.9 0.32 1.1E-05 41.3 11.6 108 85-244 21-139 (217)
143 3o63_A Probable thiamine-phosp 94.9 0.064 2.2E-06 46.3 7.4 44 201-245 174-220 (243)
144 1vcf_A Isopentenyl-diphosphate 94.9 0.029 9.9E-07 50.5 5.4 43 203-245 242-286 (332)
145 3kru_A NADH:flavin oxidoreduct 94.9 0.036 1.2E-06 50.4 6.0 43 202-244 263-307 (343)
146 1rd5_A Tryptophan synthase alp 94.9 0.036 1.2E-06 48.0 5.6 41 205-245 190-231 (262)
147 4adt_A Pyridoxine biosynthetic 94.8 0.11 3.8E-06 46.3 8.9 39 203-241 65-104 (297)
148 3aty_A Tcoye, prostaglandin F2 94.8 0.11 3.7E-06 47.8 9.0 38 205-244 297-336 (379)
149 4e38_A Keto-hydroxyglutarate-a 94.8 0.33 1.1E-05 41.7 11.4 36 206-243 118-153 (232)
150 2zbt_A Pyridoxal biosynthesis 94.7 0.023 7.9E-07 50.1 4.2 44 202-245 193-239 (297)
151 1gte_A Dihydropyrimidine dehyd 94.6 0.083 2.8E-06 54.5 8.4 41 205-245 775-817 (1025)
152 1gvf_A Tagatose-bisphosphate a 94.6 0.06 2.1E-06 47.7 6.4 144 95-244 67-232 (286)
153 4adt_A Pyridoxine biosynthetic 94.5 0.033 1.1E-06 49.7 4.6 44 202-245 193-239 (297)
154 2hsa_B 12-oxophytodienoate red 94.3 0.059 2E-06 50.0 6.0 40 204-244 307-348 (402)
155 2v82_A 2-dehydro-3-deoxy-6-pho 94.2 0.17 5.7E-06 42.1 8.2 70 127-244 16-87 (212)
156 2c6q_A GMP reductase 2; TIM ba 94.2 0.18 6.3E-06 45.7 9.1 34 212-245 219-253 (351)
157 1geq_A Tryptophan synthase alp 94.2 0.061 2.1E-06 45.8 5.6 42 204-245 179-221 (248)
158 3cwo_X Beta/alpha-barrel prote 94.2 0.28 9.6E-06 40.3 9.6 43 203-245 161-204 (237)
159 2qjg_A Putative aldolase MJ040 94.2 0.27 9.3E-06 42.4 9.8 42 202-243 188-236 (273)
160 1ps9_A 2,4-dienoyl-COA reducta 94.2 0.21 7.2E-06 48.9 10.0 41 204-244 268-310 (671)
161 2nv1_A Pyridoxal biosynthesis 94.2 0.03 1E-06 49.8 3.6 45 201-245 192-239 (305)
162 2yzr_A Pyridoxal biosynthesis 94.1 0.041 1.4E-06 49.7 4.3 41 205-245 229-272 (330)
163 3l5a_A NADH/flavin oxidoreduct 94.1 0.14 4.7E-06 47.8 8.0 81 128-244 262-346 (419)
164 1i4n_A Indole-3-glycerol phosp 94.1 0.077 2.6E-06 46.2 5.9 40 204-243 89-129 (251)
165 1geq_A Tryptophan synthase alp 94.0 0.15 5.1E-06 43.4 7.6 41 205-245 69-116 (248)
166 2tps_A Protein (thiamin phosph 94.0 0.046 1.6E-06 45.8 4.2 45 201-245 156-201 (227)
167 3zen_D Fatty acid synthase; tr 93.9 0.19 6.4E-06 57.4 10.1 182 48-245 402-647 (3089)
168 3o07_A Pyridoxine biosynthesis 93.9 0.23 7.7E-06 43.8 8.6 74 134-244 22-97 (291)
169 2uv8_G Fatty acid synthase sub 93.7 0.11 3.9E-06 57.1 7.6 53 49-109 565-621 (2051)
170 2uva_G Fatty acid synthase bet 93.6 0.21 7.3E-06 55.1 9.6 131 72-245 637-796 (2060)
171 1vkf_A Glycerol uptake operon 93.6 0.034 1.2E-06 46.3 2.6 31 215-246 148-179 (188)
172 1w8s_A FBP aldolase, fructose- 93.3 1.1 3.6E-05 38.9 11.9 40 204-243 183-230 (263)
173 1wbh_A KHG/KDPG aldolase; lyas 93.1 0.37 1.3E-05 40.6 8.5 68 128-243 26-94 (214)
174 3q94_A Fructose-bisphosphate a 93.1 0.069 2.4E-06 47.4 4.1 146 93-244 68-236 (288)
175 1vs1_A 3-deoxy-7-phosphoheptul 93.1 2 7E-05 37.6 13.4 146 88-246 88-244 (276)
176 1vr6_A Phospho-2-dehydro-3-deo 93.0 1.2 4E-05 40.5 12.1 145 89-246 157-312 (350)
177 1vhc_A Putative KHG/KDPG aldol 93.0 0.42 1.4E-05 40.6 8.6 67 128-242 27-94 (224)
178 1yxy_A Putative N-acetylmannos 92.8 0.7 2.4E-05 38.8 9.9 115 84-241 29-157 (234)
179 1wa3_A 2-keto-3-deoxy-6-phosph 92.6 0.49 1.7E-05 38.9 8.4 70 127-245 19-90 (205)
180 3ceu_A Thiamine phosphate pyro 92.6 0.15 5.1E-06 42.6 5.2 45 201-245 127-173 (210)
181 2nv1_A Pyridoxal biosynthesis 92.5 0.75 2.6E-05 40.5 10.0 41 204-244 66-107 (305)
182 3vnd_A TSA, tryptophan synthas 92.5 0.66 2.2E-05 40.5 9.4 40 205-244 83-130 (267)
183 3nav_A Tryptophan synthase alp 92.5 0.68 2.3E-05 40.5 9.5 90 127-244 31-132 (271)
184 2ekc_A AQ_1548, tryptophan syn 92.3 0.59 2E-05 40.4 8.9 90 127-244 28-129 (262)
185 3tha_A Tryptophan synthase alp 92.3 0.11 3.9E-06 45.1 4.2 39 206-245 189-228 (252)
186 1vhc_A Putative KHG/KDPG aldol 92.2 1.1 3.7E-05 38.0 10.2 35 207-243 102-136 (224)
187 1qop_A Tryptophan synthase alp 92.1 0.53 1.8E-05 40.8 8.4 40 205-244 82-129 (268)
188 4a29_A Engineered retro-aldol 92.1 0.68 2.3E-05 40.3 8.9 40 204-243 92-132 (258)
189 3pm6_A Putative fructose-bisph 91.9 0.16 5.3E-06 45.4 4.7 45 200-244 203-251 (306)
190 4a29_A Engineered retro-aldol 91.9 0.85 2.9E-05 39.7 9.2 42 204-245 190-234 (258)
191 3nvt_A 3-deoxy-D-arabino-heptu 91.8 1.2 4.1E-05 40.9 10.7 45 202-246 297-348 (385)
192 1pii_A N-(5'phosphoribosyl)ant 91.8 0.18 6.2E-06 47.5 5.2 40 204-243 96-136 (452)
193 1ydn_A Hydroxymethylglutaryl-C 91.7 0.64 2.2E-05 40.8 8.6 104 93-247 124-234 (295)
194 3vkj_A Isopentenyl-diphosphate 91.6 0.21 7E-06 45.8 5.3 41 205-245 255-297 (368)
195 4ab4_A Xenobiotic reductase B; 91.6 0.21 7E-06 45.7 5.2 39 206-244 269-308 (362)
196 1rd5_A Tryptophan synthase alp 91.5 0.9 3.1E-05 39.0 9.1 41 205-245 83-126 (262)
197 3gka_A N-ethylmaleimide reduct 91.5 0.21 7.2E-06 45.6 5.2 39 206-244 277-316 (361)
198 1o94_A Tmadh, trimethylamine d 91.4 0.18 6E-06 50.0 5.0 41 204-244 279-321 (729)
199 3glc_A Aldolase LSRF; TIM barr 91.2 1.7 5.9E-05 38.4 10.8 39 206-244 213-257 (295)
200 3sz8_A 2-dehydro-3-deoxyphosph 91.1 1.2 4.2E-05 39.2 9.6 148 81-246 70-243 (285)
201 2v82_A 2-dehydro-3-deoxy-6-pho 91.0 0.19 6.7E-06 41.6 4.1 41 204-245 134-177 (212)
202 3k30_A Histamine dehydrogenase 90.9 0.17 5.8E-06 49.7 4.3 42 203-244 281-324 (690)
203 2yzr_A Pyridoxal biosynthesis 90.6 1.5 5.2E-05 39.4 9.8 41 204-244 62-103 (330)
204 2yw3_A 4-hydroxy-2-oxoglutarat 90.4 0.43 1.5E-05 39.9 5.8 41 205-245 139-180 (207)
205 1me8_A Inosine-5'-monophosphat 90.1 0.95 3.3E-05 42.9 8.6 30 216-245 352-382 (503)
206 3ks6_A Glycerophosphoryl diest 89.9 3.3 0.00011 35.2 11.2 105 88-242 116-230 (250)
207 1i4n_A Indole-3-glycerol phosp 89.8 0.38 1.3E-05 41.7 5.0 127 94-244 93-230 (251)
208 4a3u_A NCR, NADH\:flavin oxido 89.8 1.7 6E-05 39.2 9.7 37 207-243 277-314 (358)
209 3eez_A Putative mandelate race 89.3 2.2 7.7E-05 38.7 10.2 40 204-243 225-266 (378)
210 1rpx_A Protein (ribulose-phosp 89.1 2 6.7E-05 35.9 9.0 78 127-246 20-100 (230)
211 1z41_A YQJM, probable NADH-dep 89.1 0.44 1.5E-05 42.8 5.1 41 205-246 198-251 (338)
212 1zco_A 2-dehydro-3-deoxyphosph 89.0 6.7 0.00023 33.9 12.5 146 88-246 73-229 (262)
213 3ajx_A 3-hexulose-6-phosphate 88.9 0.68 2.3E-05 38.0 5.9 42 206-248 42-88 (207)
214 1mxs_A KDPG aldolase; 2-keto-3 88.8 1.1 3.9E-05 37.9 7.3 35 208-242 68-103 (225)
215 2zad_A Muconate cycloisomerase 88.6 0.87 3E-05 40.7 6.7 46 202-248 221-270 (345)
216 1mzh_A Deoxyribose-phosphate a 88.2 0.6 2.1E-05 39.5 5.1 39 206-245 106-153 (225)
217 2fli_A Ribulose-phosphate 3-ep 88.0 0.4 1.4E-05 39.8 3.8 40 206-245 155-199 (220)
218 1zfj_A Inosine monophosphate d 87.9 0.67 2.3E-05 43.5 5.8 42 204-245 321-366 (491)
219 3m5v_A DHDPS, dihydrodipicolin 87.9 1.6 5.4E-05 38.5 7.9 73 128-245 26-111 (301)
220 3flu_A DHDPS, dihydrodipicolin 87.6 2.2 7.5E-05 37.5 8.6 74 127-245 25-110 (297)
221 1rpx_A Protein (ribulose-phosp 87.6 0.43 1.5E-05 40.1 3.8 44 202-245 157-208 (230)
222 1ujp_A Tryptophan synthase alp 87.6 0.88 3E-05 39.7 5.9 40 205-244 80-126 (271)
223 2zbt_A Pyridoxal biosynthesis 87.3 0.84 2.9E-05 39.9 5.7 39 204-242 66-105 (297)
224 3fs2_A 2-dehydro-3-deoxyphosph 86.9 0.87 3E-05 40.5 5.5 147 81-246 91-262 (298)
225 4gj1_A 1-(5-phosphoribosyl)-5- 86.9 1.1 3.8E-05 38.3 6.1 44 203-246 62-106 (243)
226 1xm3_A Thiazole biosynthesis p 86.6 4 0.00014 35.2 9.6 28 216-243 126-153 (264)
227 1vc4_A Indole-3-glycerol phosp 86.5 0.4 1.4E-05 41.5 3.1 41 203-244 190-236 (254)
228 3gr7_A NADPH dehydrogenase; fl 86.2 0.4 1.4E-05 43.2 3.0 41 205-245 198-250 (340)
229 3tak_A DHDPS, dihydrodipicolin 86.1 2.5 8.5E-05 37.0 8.1 73 128-245 20-104 (291)
230 3l21_A DHDPS, dihydrodipicolin 86.1 16 0.00055 32.0 13.5 79 73-151 20-118 (304)
231 1h1y_A D-ribulose-5-phosphate 86.1 0.64 2.2E-05 39.1 4.1 40 206-245 162-202 (228)
232 2cu0_A Inosine-5'-monophosphat 86.0 0.86 3E-05 42.9 5.4 41 206-246 318-359 (486)
233 3hgj_A Chromate reductase; TIM 85.8 1.3 4.6E-05 39.8 6.3 41 205-245 206-260 (349)
234 3nl6_A Thiamine biosynthetic b 85.7 2.2 7.7E-05 40.9 8.1 44 201-245 152-210 (540)
235 3l21_A DHDPS, dihydrodipicolin 85.5 2.8 9.6E-05 37.0 8.2 73 128-245 34-118 (304)
236 3si9_A DHDPS, dihydrodipicolin 85.4 2.4 8.2E-05 37.7 7.7 73 128-245 41-125 (315)
237 1jvn_A Glutamine, bifunctional 85.4 0.93 3.2E-05 43.6 5.3 42 204-245 315-368 (555)
238 2r8w_A AGR_C_1641P; APC7498, d 85.4 3.6 0.00012 36.8 8.9 74 128-246 53-138 (332)
239 1xg4_A Probable methylisocitra 85.4 1.4 4.8E-05 39.0 6.1 46 203-248 190-239 (295)
240 3na8_A Putative dihydrodipicol 85.3 1.8 6E-05 38.5 6.8 73 128-245 43-127 (315)
241 2pgw_A Muconate cycloisomerase 85.2 1.3 4.5E-05 40.2 6.0 43 201-243 226-270 (384)
242 2fli_A Ribulose-phosphate 3-ep 85.1 2.8 9.6E-05 34.5 7.6 44 204-247 49-94 (220)
243 3dz1_A Dihydrodipicolinate syn 85.0 2.2 7.4E-05 37.9 7.2 74 128-246 27-111 (313)
244 1rvg_A Fructose-1,6-bisphospha 85.0 4.7 0.00016 35.8 9.3 79 125-243 151-252 (305)
245 2wkj_A N-acetylneuraminate lya 84.9 4.7 0.00016 35.5 9.4 74 128-246 30-115 (303)
246 3sr7_A Isopentenyl-diphosphate 84.8 0.76 2.6E-05 41.9 4.2 41 205-245 266-308 (365)
247 3tml_A 2-dehydro-3-deoxyphosph 84.7 1.9 6.4E-05 38.1 6.5 148 81-246 67-244 (288)
248 3qze_A DHDPS, dihydrodipicolin 84.7 2.4 8.2E-05 37.6 7.4 73 128-245 42-126 (314)
249 1to3_A Putative aldolase YIHT; 84.6 0.67 2.3E-05 41.2 3.6 39 204-243 205-253 (304)
250 3daq_A DHDPS, dihydrodipicolin 84.5 2.7 9.3E-05 36.8 7.6 73 128-245 21-105 (292)
251 3i4k_A Muconate lactonizing en 84.2 3.1 0.00011 37.7 8.1 47 202-248 231-281 (383)
252 1wbh_A KHG/KDPG aldolase; lyas 84.2 1.7 5.7E-05 36.5 5.8 36 207-243 100-135 (214)
253 2h6r_A Triosephosphate isomera 84.0 0.48 1.7E-05 39.9 2.3 45 205-251 42-95 (219)
254 2oz8_A MLL7089 protein; struct 83.9 1.5 5.1E-05 39.9 5.8 44 202-248 229-275 (389)
255 1o60_A 2-dehydro-3-deoxyphosph 83.8 4.6 0.00016 35.6 8.7 100 93-246 123-241 (292)
256 2ehh_A DHDPS, dihydrodipicolin 83.5 22 0.00074 30.9 13.0 77 74-151 7-103 (294)
257 1nvm_A HOA, 4-hydroxy-2-oxoval 83.2 12 0.0004 33.5 11.4 112 92-261 123-242 (345)
258 3noy_A 4-hydroxy-3-methylbut-2 83.2 4.2 0.00014 37.0 8.2 68 127-242 43-110 (366)
259 3ngj_A Deoxyribose-phosphate a 83.1 8.1 0.00028 33.0 9.7 45 201-245 183-230 (239)
260 2qgy_A Enolase from the enviro 83.0 1.7 5.7E-05 39.7 5.7 47 202-248 231-281 (391)
261 1pii_A N-(5'phosphoribosyl)ant 83.0 11 0.00037 35.3 11.3 41 204-245 194-237 (452)
262 3qfe_A Putative dihydrodipicol 82.9 3.1 0.0001 37.0 7.3 74 128-246 30-115 (318)
263 3oa3_A Aldolase; structural ge 82.6 16 0.00055 32.1 11.6 45 201-245 214-264 (288)
264 1tqj_A Ribulose-phosphate 3-ep 82.4 3.2 0.00011 35.0 6.9 75 127-244 14-92 (230)
265 2h6r_A Triosephosphate isomera 82.4 1.2 4.1E-05 37.4 4.2 38 208-245 161-200 (219)
266 2yxg_A DHDPS, dihydrodipicolin 82.3 23 0.00078 30.7 12.7 77 74-151 7-103 (289)
267 2rdx_A Mandelate racemase/muco 82.2 1.6 5.6E-05 39.4 5.3 45 204-248 225-273 (379)
268 1tqj_A Ribulose-phosphate 3-ep 82.2 0.81 2.8E-05 38.8 3.1 43 203-245 155-202 (230)
269 2ftp_A Hydroxymethylglutaryl-C 82.2 1.8 6.1E-05 38.1 5.4 44 205-248 191-241 (302)
270 3jr2_A Hexulose-6-phosphate sy 82.0 0.34 1.2E-05 40.6 0.6 41 203-244 151-194 (218)
271 2yw3_A 4-hydroxy-2-oxoglutarat 82.0 2 7E-05 35.7 5.5 36 207-243 95-130 (207)
272 3qvq_A Phosphodiesterase OLEI0 81.8 4.4 0.00015 34.4 7.7 36 206-242 201-236 (252)
273 4dpp_A DHDPS 2, dihydrodipicol 81.8 4.9 0.00017 36.5 8.3 25 128-152 78-102 (360)
274 3s5o_A 4-hydroxy-2-oxoglutarat 81.7 3.3 0.00011 36.6 7.0 73 128-245 33-117 (307)
275 1mxs_A KDPG aldolase; 2-keto-3 81.7 1.6 5.4E-05 37.0 4.7 37 206-243 109-145 (225)
276 1nsj_A PRAI, phosphoribosyl an 81.6 0.63 2.2E-05 39.0 2.1 44 201-245 137-181 (205)
277 2isw_A Putative fructose-1,6-b 81.6 4.2 0.00014 36.4 7.6 147 93-243 64-254 (323)
278 1mdl_A Mandelate racemase; iso 81.5 1.8 6E-05 38.9 5.2 42 202-243 226-269 (359)
279 1tqx_A D-ribulose-5-phosphate 81.5 2.2 7.6E-05 36.2 5.6 43 203-245 159-202 (227)
280 3tjl_A NADPH dehydrogenase; OL 81.4 0.27 9.4E-06 45.6 -0.2 40 205-244 302-346 (407)
281 2wqp_A Polysialic acid capsule 81.3 21 0.00071 32.2 12.2 103 93-251 139-243 (349)
282 1v5x_A PRA isomerase, phosphor 80.9 1 3.6E-05 37.6 3.3 44 201-245 132-175 (203)
283 3qze_A DHDPS, dihydrodipicolin 80.9 29 0.00098 30.5 13.2 94 58-151 9-126 (314)
284 3l5l_A Xenobiotic reductase A; 80.8 4.7 0.00016 36.4 7.9 41 206-246 213-268 (363)
285 3qld_A Mandelate racemase/muco 80.5 15 0.00052 33.3 11.2 41 202-242 226-268 (388)
286 2qdd_A Mandelate racemase/muco 80.1 2.1 7.3E-05 38.7 5.3 40 204-243 225-266 (378)
287 2ovl_A Putative racemase; stru 80.1 1.8 6E-05 39.1 4.8 43 201-243 227-271 (371)
288 2p8b_A Mandelate racemase/muco 80.1 2.5 8.5E-05 38.0 5.7 42 202-243 223-266 (369)
289 3s5o_A 4-hydroxy-2-oxoglutarat 80.0 30 0.001 30.2 12.8 24 128-151 94-117 (307)
290 1o5k_A DHDPS, dihydrodipicolin 79.9 29 0.00099 30.3 12.6 78 73-151 18-115 (306)
291 1nu5_A Chloromuconate cycloiso 79.7 2.5 8.6E-05 38.0 5.6 42 202-243 225-268 (370)
292 3eb2_A Putative dihydrodipicol 79.6 2.1 7.2E-05 37.7 4.9 43 202-245 53-107 (300)
293 2r91_A 2-keto-3-deoxy-(6-phosp 79.5 13 0.00045 32.2 10.1 73 128-246 17-99 (286)
294 1viz_A PCRB protein homolog; s 79.4 1.4 4.9E-05 37.8 3.7 22 130-151 20-41 (240)
295 3cpr_A Dihydrodipicolinate syn 79.4 31 0.0011 30.1 13.4 79 73-151 21-119 (304)
296 3ajx_A 3-hexulose-6-phosphate 79.4 2.1 7.3E-05 34.9 4.6 38 206-244 149-186 (207)
297 1ofd_A Ferredoxin-dependent gl 79.2 4.7 0.00016 43.2 8.1 30 216-245 1099-1129(1520)
298 2b7n_A Probable nicotinate-nuc 79.1 3 0.0001 36.3 5.7 40 206-246 170-211 (273)
299 1chr_A Chloromuconate cycloiso 79.0 2.9 0.0001 37.7 5.8 48 201-248 224-275 (370)
300 1rvk_A Isomerase/lactonizing e 78.7 3.5 0.00012 37.2 6.3 42 202-243 237-281 (382)
301 2o55_A Putative glycerophospho 78.4 8.7 0.0003 32.5 8.5 36 206-242 203-242 (258)
302 2ps2_A Putative mandelate race 78.4 2.5 8.5E-05 38.1 5.2 40 204-243 227-268 (371)
303 2nql_A AGR_PAT_674P, isomerase 78.4 2 6.7E-05 39.1 4.5 42 202-243 245-288 (388)
304 3ovp_A Ribulose-phosphate 3-ep 78.3 1.8 6.1E-05 36.7 3.9 40 205-244 157-197 (228)
305 1qap_A Quinolinic acid phospho 78.2 1.8 6.2E-05 38.3 4.1 52 202-253 236-291 (296)
306 1wa3_A 2-keto-3-deoxy-6-phosph 78.1 1.4 4.7E-05 36.1 3.1 41 204-245 137-179 (205)
307 3n9r_A Fructose-bisphosphate a 78.0 8.7 0.0003 34.1 8.4 79 125-243 153-254 (307)
308 1tkk_A Similar to chloromucona 77.9 3.5 0.00012 37.0 6.0 42 202-243 224-267 (366)
309 1rqb_A Transcarboxylase 5S sub 77.5 12 0.00042 35.8 9.9 44 206-249 208-259 (539)
310 2jbm_A Nicotinate-nucleotide p 77.5 3.5 0.00012 36.4 5.8 40 206-246 185-226 (299)
311 2v9d_A YAGE; dihydrodipicolini 77.4 39 0.0013 30.1 14.5 79 73-151 36-134 (343)
312 2qjg_A Putative aldolase MJ040 77.1 11 0.00039 31.9 8.8 37 208-245 137-187 (273)
313 3ndo_A Deoxyribose-phosphate a 77.0 29 0.00098 29.4 11.2 45 201-245 173-220 (231)
314 3h5d_A DHDPS, dihydrodipicolin 76.8 6.7 0.00023 34.7 7.4 73 128-245 26-111 (311)
315 3m5v_A DHDPS, dihydrodipicolin 76.7 37 0.0013 29.5 13.2 24 128-151 88-111 (301)
316 2og9_A Mandelate racemase/muco 76.7 3 0.0001 38.0 5.2 41 202-242 244-286 (393)
317 3tj4_A Mandelate racemase; eno 76.6 3.2 0.00011 37.6 5.4 47 202-248 234-284 (372)
318 2hzg_A Mandelate racemase/muco 76.5 3.2 0.00011 37.8 5.4 47 202-248 232-283 (401)
319 3r12_A Deoxyribose-phosphate a 76.4 34 0.0012 29.5 11.6 45 201-245 199-246 (260)
320 2vc6_A MOSA, dihydrodipicolina 76.4 37 0.0013 29.3 12.9 25 128-152 80-104 (292)
321 1ea0_A Glutamate synthase [NAD 76.3 5.4 0.00018 42.6 7.5 41 204-244 1044-1093(1479)
322 1vli_A Spore coat polysacchari 76.2 27 0.00094 31.9 11.5 103 93-251 149-255 (385)
323 2r91_A 2-keto-3-deoxy-(6-phosp 76.2 28 0.00095 30.1 11.2 77 74-151 5-98 (286)
324 1q6o_A Humps, 3-keto-L-gulonat 76.0 0.96 3.3E-05 37.7 1.6 41 204-244 149-191 (216)
325 2qkf_A 3-deoxy-D-manno-octulos 75.5 21 0.00071 31.1 10.1 142 88-246 72-238 (280)
326 4af0_A Inosine-5'-monophosphat 75.1 4.4 0.00015 38.9 6.0 39 207-245 375-414 (556)
327 3m47_A Orotidine 5'-phosphate 75.0 5.9 0.0002 33.3 6.3 38 206-244 162-202 (228)
328 3si9_A DHDPS, dihydrodipicolin 75.0 43 0.0015 29.4 14.5 79 73-151 27-125 (315)
329 3ble_A Citramalate synthase fr 74.8 9.5 0.00033 34.0 7.9 44 206-249 202-252 (337)
330 2qde_A Mandelate racemase/muco 74.5 4.4 0.00015 36.9 5.7 42 202-243 226-269 (397)
331 2nuw_A 2-keto-3-deoxygluconate 74.4 15 0.00051 31.9 9.0 73 128-246 18-100 (288)
332 3e96_A Dihydrodipicolinate syn 74.4 36 0.0012 29.9 11.6 78 73-150 16-113 (316)
333 2pz0_A Glycerophosphoryl diest 74.4 21 0.00072 30.0 9.8 37 205-242 201-237 (252)
334 2poz_A Putative dehydratase; o 74.2 3 0.0001 37.9 4.5 47 202-248 236-286 (392)
335 4aaj_A N-(5'-phosphoribosyl)an 74.1 2.2 7.5E-05 36.3 3.3 42 202-245 161-203 (228)
336 3dg3_A Muconate cycloisomerase 74.0 5.1 0.00017 36.1 6.0 41 203-243 223-265 (367)
337 3flu_A DHDPS, dihydrodipicolin 73.9 44 0.0015 29.0 13.9 78 74-151 13-110 (297)
338 2ojp_A DHDPS, dihydrodipicolin 73.8 43 0.0015 28.9 12.1 24 128-151 81-104 (292)
339 1f6k_A N-acetylneuraminate lya 73.8 44 0.0015 28.9 13.1 78 74-151 9-107 (293)
340 2uv8_G Fatty acid synthase sub 73.7 3.9 0.00013 45.2 5.9 118 92-244 663-802 (2051)
341 3cu2_A Ribulose-5-phosphate 3- 73.7 3.4 0.00011 35.3 4.4 41 205-245 171-218 (237)
342 2nuw_A 2-keto-3-deoxygluconate 73.3 36 0.0012 29.4 11.2 78 74-151 5-99 (288)
343 3c2e_A Nicotinate-nucleotide p 73.2 3.4 0.00012 36.4 4.5 41 206-247 187-229 (294)
344 1xky_A Dihydrodipicolinate syn 73.2 19 0.00064 31.5 9.3 74 128-246 31-116 (301)
345 3b4u_A Dihydrodipicolinate syn 73.2 45 0.0016 28.8 14.4 78 74-151 9-106 (294)
346 1xky_A Dihydrodipicolinate syn 73.1 46 0.0016 28.9 14.3 78 74-151 18-115 (301)
347 2r14_A Morphinone reductase; H 73.0 14 0.00048 33.5 8.7 40 206-245 221-276 (377)
348 2pp0_A L-talarate/galactarate 73.0 4.2 0.00014 37.0 5.2 42 202-243 257-300 (398)
349 3d0c_A Dihydrodipicolinate syn 72.9 48 0.0016 29.0 12.4 78 74-151 17-114 (314)
350 2wkj_A N-acetylneuraminate lya 72.8 47 0.0016 28.9 13.1 79 73-151 16-114 (303)
351 3qz6_A HPCH/HPAI aldolase; str 72.8 15 0.00052 31.5 8.5 24 135-158 29-52 (261)
352 1ps9_A 2,4-dienoyl-COA reducta 72.8 50 0.0017 31.8 13.2 41 205-245 195-249 (671)
353 3fkr_A L-2-keto-3-deoxyarabona 72.7 9.4 0.00032 33.6 7.3 23 128-150 27-49 (309)
354 1w3i_A EDA, 2-keto-3-deoxy glu 72.7 16 0.00055 31.8 8.8 73 128-246 18-100 (293)
355 1r0m_A N-acylamino acid racema 72.6 4.7 0.00016 36.3 5.4 42 202-243 225-268 (375)
356 1tzz_A Hypothetical protein L1 72.6 3.4 0.00012 37.5 4.5 42 202-243 247-294 (392)
357 4dwd_A Mandelate racemase/muco 72.5 3.2 0.00011 38.0 4.3 41 203-243 229-270 (393)
358 3jva_A Dipeptide epimerase; en 72.2 5 0.00017 35.9 5.5 41 203-243 221-263 (354)
359 1qap_A Quinolinic acid phospho 72.2 6.4 0.00022 34.7 6.0 39 206-245 197-236 (296)
360 3ctl_A D-allulose-6-phosphate 72.1 3.2 0.00011 35.2 3.9 42 203-244 149-195 (231)
361 1sjd_A N-acylamino acid racema 72.0 5.8 0.0002 35.5 5.9 47 202-248 219-269 (368)
362 3my9_A Muconate cycloisomerase 71.9 5.2 0.00018 36.2 5.5 41 202-242 228-270 (377)
363 3inp_A D-ribulose-phosphate 3- 71.7 13 0.00043 31.9 7.7 77 125-244 35-116 (246)
364 3dz1_A Dihydrodipicolinate syn 71.6 51 0.0018 28.8 13.3 78 73-150 13-109 (313)
365 3fkr_A L-2-keto-3-deoxyarabona 71.6 51 0.0018 28.8 13.9 79 73-151 13-111 (309)
366 2nx9_A Oxaloacetate decarboxyl 71.4 28 0.00095 32.6 10.5 44 206-249 191-240 (464)
367 2gdq_A YITF; mandelate racemas 71.2 4.6 0.00016 36.5 5.0 42 202-243 222-265 (382)
368 2zc8_A N-acylamino acid racema 71.2 5.3 0.00018 35.8 5.4 42 202-243 218-261 (369)
369 3ctl_A D-allulose-6-phosphate 71.2 16 0.00055 30.8 8.1 42 203-244 44-87 (231)
370 3ddm_A Putative mandelate race 71.1 3.4 0.00012 37.7 4.1 47 202-248 236-287 (392)
371 3ozy_A Putative mandelate race 71.1 3.3 0.00011 37.8 4.0 42 202-243 232-276 (389)
372 3d0c_A Dihydrodipicolinate syn 70.7 7 0.00024 34.5 6.0 22 128-149 31-52 (314)
373 2r8w_A AGR_C_1641P; APC7498, d 70.7 56 0.0019 28.9 13.1 79 73-151 39-137 (332)
374 2yxg_A DHDPS, dihydrodipicolin 70.7 22 0.00076 30.7 9.2 25 128-152 19-43 (289)
375 3rcy_A Mandelate racemase/muco 70.6 5.1 0.00017 37.1 5.2 41 202-242 240-282 (433)
376 1x1o_A Nicotinate-nucleotide p 70.5 6.7 0.00023 34.4 5.7 39 207-246 185-225 (286)
377 3b4u_A Dihydrodipicolinate syn 70.3 24 0.00084 30.6 9.4 74 128-246 22-107 (294)
378 2gl5_A Putative dehydratase pr 70.0 4.5 0.00015 36.9 4.7 42 202-243 255-298 (410)
379 3go2_A Putative L-alanine-DL-g 69.8 6 0.00021 36.2 5.5 42 202-243 248-291 (409)
380 3sbf_A Mandelate racemase / mu 69.7 4.7 0.00016 36.8 4.8 41 202-242 238-280 (401)
381 3eb2_A Putative dihydrodipicol 69.6 56 0.0019 28.4 13.3 80 73-152 9-108 (300)
382 1w3i_A EDA, 2-keto-3-deoxy glu 69.4 48 0.0016 28.7 11.1 24 128-151 76-99 (293)
383 1h1y_A D-ribulose-5-phosphate 69.4 13 0.00045 30.8 7.2 76 127-244 16-94 (228)
384 2ox4_A Putative mandelate race 69.3 4.1 0.00014 37.1 4.2 41 202-242 246-288 (403)
385 3cpr_A Dihydrodipicolinate syn 68.9 34 0.0012 29.9 10.0 74 128-246 35-120 (304)
386 3l5a_A NADH/flavin oxidoreduct 68.8 18 0.00063 33.2 8.6 41 206-247 226-288 (419)
387 3inp_A D-ribulose-phosphate 3- 68.7 2.7 9.3E-05 36.1 2.7 42 203-244 177-223 (246)
388 1xi3_A Thiamine phosphate pyro 68.7 15 0.00051 29.6 7.3 32 208-244 62-93 (215)
389 2vws_A YFAU, 2-keto-3-deoxy su 68.6 24 0.00082 30.2 8.9 22 134-155 30-51 (267)
390 2ehh_A DHDPS, dihydrodipicolin 68.5 24 0.00084 30.6 9.0 25 128-152 19-43 (294)
391 3i6e_A Muconate cycloisomerase 68.5 7.2 0.00025 35.4 5.7 41 202-242 229-271 (385)
392 1o5k_A DHDPS, dihydrodipicolin 68.5 22 0.00077 31.1 8.8 23 128-150 31-53 (306)
393 2v5j_A 2,4-dihydroxyhept-2-ENE 68.3 23 0.0008 30.8 8.8 19 135-153 52-70 (287)
394 3dgb_A Muconate cycloisomerase 68.2 7.3 0.00025 35.3 5.7 47 202-248 231-281 (382)
395 3ugv_A Enolase; enzyme functio 68.2 6.2 0.00021 35.9 5.2 39 203-241 257-297 (390)
396 3r0u_A Enzyme of enolase super 68.2 8.2 0.00028 35.0 6.0 42 202-243 225-268 (379)
397 3s83_A Ggdef family protein; s 68.1 5.6 0.00019 33.5 4.6 36 206-241 199-234 (259)
398 3elf_A Fructose-bisphosphate a 67.9 19 0.00066 32.4 8.3 45 200-244 219-276 (349)
399 3tqv_A Nicotinate-nucleotide p 67.9 8.7 0.0003 33.8 5.8 38 207-245 188-226 (287)
400 1o4u_A Type II quinolic acid p 67.5 8.5 0.00029 33.7 5.7 38 207-245 182-221 (285)
401 2o56_A Putative mandelate race 67.5 5.1 0.00018 36.4 4.5 42 202-243 252-295 (407)
402 3stp_A Galactonate dehydratase 67.4 6.6 0.00022 36.1 5.2 39 203-241 268-308 (412)
403 2p10_A MLL9387 protein; putati 67.3 16 0.00054 32.1 7.3 46 201-247 145-192 (286)
404 1x1o_A Nicotinate-nucleotide p 67.0 7.6 0.00026 34.1 5.3 51 202-252 224-278 (286)
405 1f6k_A N-acetylneuraminate lya 66.7 22 0.00075 30.8 8.3 23 128-150 22-45 (293)
406 2qq6_A Mandelate racemase/muco 66.7 6.6 0.00023 35.8 5.1 42 202-243 247-290 (410)
407 2cw6_A Hydroxymethylglutaryl-C 66.6 31 0.001 29.9 9.3 103 93-246 125-234 (298)
408 3mwc_A Mandelate racemase/muco 66.5 9.3 0.00032 34.9 6.0 41 203-243 242-284 (400)
409 3e96_A Dihydrodipicolinate syn 66.5 8.2 0.00028 34.1 5.5 22 128-149 31-52 (316)
410 4e5t_A Mandelate racemase / mu 66.4 5.3 0.00018 36.5 4.4 41 202-242 245-287 (404)
411 3ven_A O-carbamoyltransferase 66.2 6.3 0.00022 38.1 5.0 42 204-245 516-567 (576)
412 3rr1_A GALD, putative D-galact 66.1 5.8 0.0002 36.4 4.6 41 202-242 215-257 (405)
413 2v9d_A YAGE; dihydrodipicolini 66.0 20 0.00069 32.0 8.1 26 127-152 49-74 (343)
414 3a5f_A Dihydrodipicolinate syn 65.9 29 0.00098 30.1 8.9 71 128-243 20-102 (291)
415 3g8r_A Probable spore coat pol 65.9 56 0.0019 29.4 10.9 99 92-246 125-227 (350)
416 3ih1_A Methylisocitrate lyase; 65.8 11 0.00037 33.4 6.1 45 204-248 199-247 (305)
417 3q45_A Mandelate racemase/muco 65.6 4.4 0.00015 36.6 3.6 45 204-248 223-271 (368)
418 3c2e_A Nicotinate-nucleotide p 65.5 1.9 6.4E-05 38.1 1.1 51 203-253 228-288 (294)
419 1ub3_A Aldolase protein; schif 65.4 59 0.002 27.1 11.6 44 201-244 159-205 (220)
420 3mqt_A Mandelate racemase/muco 65.3 4.1 0.00014 37.2 3.4 40 203-242 239-280 (394)
421 3mkc_A Racemase; metabolic pro 65.3 5.2 0.00018 36.5 4.1 40 203-242 244-285 (394)
422 1o66_A 3-methyl-2-oxobutanoate 65.3 59 0.002 28.2 10.6 129 91-243 26-180 (275)
423 4e8g_A Enolase, mandelate race 65.2 8.8 0.0003 35.0 5.6 46 203-248 245-294 (391)
424 3kzp_A LMO0111 protein, putati 65.0 6.2 0.00021 32.5 4.2 36 206-241 189-224 (235)
425 3ivs_A Homocitrate synthase, m 64.9 32 0.0011 31.8 9.4 43 207-249 214-262 (423)
426 4f3h_A Fimxeal, putative uncha 64.8 5.1 0.00018 33.6 3.7 35 207-241 204-238 (250)
427 3fv9_G Mandelate racemase/muco 64.7 10 0.00034 34.4 5.9 40 204-243 231-272 (386)
428 3fcp_A L-Ala-D/L-Glu epimerase 64.6 8.7 0.0003 34.7 5.4 47 202-248 230-280 (381)
429 4e4u_A Mandalate racemase/muco 64.5 6.3 0.00022 36.2 4.5 41 202-242 238-280 (412)
430 3toy_A Mandelate racemase/muco 64.3 6.3 0.00021 35.8 4.4 41 202-242 250-292 (383)
431 2wqp_A Polysialic acid capsule 64.2 27 0.00092 31.5 8.5 99 126-245 31-132 (349)
432 3gd6_A Muconate cycloisomerase 64.1 13 0.00044 33.8 6.5 40 203-243 227-267 (391)
433 1o4u_A Type II quinolic acid p 63.8 2.9 0.0001 36.8 2.0 51 203-253 222-279 (285)
434 2ze3_A DFA0005; organic waste 63.8 20 0.00067 31.2 7.3 44 204-247 192-235 (275)
435 2vc6_A MOSA, dihydrodipicolina 63.4 22 0.00076 30.8 7.7 22 128-149 19-40 (292)
436 2h9a_B CO dehydrogenase/acetyl 63.4 33 0.0011 30.3 8.8 122 86-245 131-294 (310)
437 3kru_A NADH:flavin oxidoreduct 63.0 23 0.00077 31.7 7.8 41 204-245 196-250 (343)
438 2gou_A Oxidoreductase, FMN-bin 62.9 8.6 0.00029 34.7 5.0 42 205-246 215-272 (365)
439 2rfg_A Dihydrodipicolinate syn 62.8 76 0.0026 27.4 12.0 24 128-151 80-103 (297)
440 2hmc_A AGR_L_411P, dihydrodipi 62.6 84 0.0029 27.9 13.7 78 74-151 32-126 (344)
441 3h5d_A DHDPS, dihydrodipicolin 62.6 79 0.0027 27.6 15.1 79 73-151 12-111 (311)
442 1vli_A Spore coat polysacchari 62.5 27 0.00091 31.9 8.2 100 126-245 40-142 (385)
443 3tlq_A Regulatory protein YDIV 62.4 6.2 0.00021 33.1 3.8 49 206-261 188-236 (242)
444 2agk_A 1-(5-phosphoribosyl)-5- 62.1 4.7 0.00016 34.7 3.0 40 204-245 64-104 (260)
445 3r4e_A Mandelate racemase/muco 62.1 3.9 0.00014 37.6 2.6 41 202-242 257-299 (418)
446 3f6p_A Transcriptional regulat 61.9 20 0.00069 25.4 6.2 40 205-244 62-102 (120)
447 2ojp_A DHDPS, dihydrodipicolin 61.8 22 0.00076 30.8 7.4 25 128-152 20-44 (292)
448 2r6o_A Putative diguanylate cy 61.6 8.9 0.0003 33.3 4.8 36 206-241 223-258 (294)
449 2czd_A Orotidine 5'-phosphate 61.6 9.1 0.00031 31.4 4.6 41 204-244 142-185 (208)
450 3f4w_A Putative hexulose 6 pho 61.3 12 0.00042 30.3 5.3 41 205-245 41-85 (211)
451 2jbm_A Nicotinate-nucleotide p 61.3 2.4 8.2E-05 37.5 0.9 50 203-252 226-282 (299)
452 3dip_A Enolase; structural gen 61.3 12 0.00043 34.1 5.9 46 203-248 252-301 (410)
453 1hg3_A Triosephosphate isomera 61.3 4.9 0.00017 34.0 2.9 47 204-252 47-102 (225)
454 3tak_A DHDPS, dihydrodipicolin 61.3 79 0.0027 27.2 12.9 78 74-151 7-104 (291)
455 2rfg_A Dihydrodipicolinate syn 61.2 27 0.00092 30.4 7.8 22 128-149 19-40 (297)
456 2nwr_A 2-dehydro-3-deoxyphosph 60.9 35 0.0012 29.5 8.4 139 88-246 61-224 (267)
457 1izc_A Macrophomate synthase i 60.9 31 0.001 30.8 8.3 23 134-156 54-76 (339)
458 3vcn_A Mannonate dehydratase; 60.8 4.6 0.00016 37.3 2.8 40 203-242 265-306 (425)
459 4dxk_A Mandelate racemase / mu 60.8 9.1 0.00031 34.9 4.8 46 203-248 248-297 (400)
460 3ro6_B Putative chloromuconate 60.8 3 0.0001 37.4 1.6 41 203-243 222-265 (356)
461 3t6c_A RSPA, putative MAND fam 60.8 6.5 0.00022 36.5 3.9 39 204-242 279-319 (440)
462 3v3w_A Starvation sensing prot 60.5 4.7 0.00016 37.2 2.8 41 202-242 263-305 (424)
463 1zco_A 2-dehydro-3-deoxyphosph 60.3 40 0.0014 28.9 8.6 78 126-244 33-113 (262)
464 1yad_A Regulatory protein TENI 60.3 15 0.00051 30.1 5.7 24 223-246 116-139 (221)
465 1qpo_A Quinolinate acid phosph 59.8 9.9 0.00034 33.3 4.7 51 203-253 223-280 (284)
466 3l12_A Putative glycerophospho 59.6 12 0.00041 32.7 5.3 38 204-242 257-294 (313)
467 1vyr_A Pentaerythritol tetrani 59.4 41 0.0014 30.2 8.9 42 205-246 215-273 (364)
468 3ik4_A Mandelate racemase/muco 59.3 15 0.0005 33.0 5.9 40 203-242 227-268 (365)
469 3ovp_A Ribulose-phosphate 3-ep 59.2 24 0.00083 29.5 6.9 42 203-244 49-94 (228)
470 3glc_A Aldolase LSRF; TIM barr 58.5 53 0.0018 28.7 9.2 81 71-152 170-259 (295)
471 3l0g_A Nicotinate-nucleotide p 58.5 14 0.00049 32.6 5.5 39 207-246 197-236 (300)
472 1wuf_A Hypothetical protein LI 58.4 11 0.00038 34.1 5.0 42 202-243 238-281 (393)
473 3eoo_A Methylisocitrate lyase; 58.4 18 0.00062 31.8 6.2 65 132-246 170-241 (298)
474 4h1z_A Enolase Q92ZS5; dehydra 58.2 19 0.00066 32.8 6.6 41 202-242 269-310 (412)
475 3pjx_A Cyclic dimeric GMP bind 57.7 12 0.00042 33.9 5.1 35 207-241 384-418 (430)
476 4hpn_A Putative uncharacterize 57.6 9 0.00031 34.4 4.2 48 201-248 224-275 (378)
477 1w0m_A TIM, triosephosphate is 57.5 4.8 0.00017 34.1 2.2 47 204-252 44-99 (226)
478 3paj_A Nicotinate-nucleotide p 57.4 11 0.00037 33.7 4.5 52 202-253 259-314 (320)
479 1wue_A Mandelate racemase/muco 57.3 14 0.00047 33.4 5.4 42 202-243 238-281 (386)
480 3hv8_A Protein FIMX; EAL phosp 57.1 11 0.00039 31.7 4.5 34 208-241 214-247 (268)
481 2b7n_A Probable nicotinate-nuc 57.0 4.8 0.00016 35.0 2.1 51 203-253 211-268 (273)
482 3bg3_A Pyruvate carboxylase, m 56.7 21 0.00073 35.3 6.9 44 206-249 294-344 (718)
483 3aty_A Tcoye, prostaglandin F2 56.5 31 0.0011 31.2 7.6 41 206-246 232-288 (379)
484 1dxe_A 2-dehydro-3-deoxy-galac 56.2 52 0.0018 27.8 8.6 20 134-153 31-50 (256)
485 2f6u_A GGGPS, (S)-3-O-geranylg 55.8 6.9 0.00023 33.3 2.9 64 130-243 20-83 (234)
486 3tha_A Tryptophan synthase alp 55.8 29 0.001 29.7 6.9 90 126-245 24-124 (252)
487 2tps_A Protein (thiamin phosph 55.6 11 0.00039 30.8 4.2 35 208-244 107-143 (227)
488 3tji_A Mandelate racemase/muco 55.1 5.2 0.00018 36.9 2.2 39 204-242 261-301 (422)
489 1s2w_A Phosphoenolpyruvate pho 54.9 37 0.0013 29.7 7.6 63 132-246 169-240 (295)
490 1f6y_A 5-methyltetrahydrofolat 54.9 99 0.0034 26.3 11.6 26 6-32 22-47 (262)
491 4hjf_A Ggdef family protein; s 54.7 14 0.00046 32.9 4.8 36 207-242 273-308 (340)
492 3vk5_A MOEO5; TIM barrel, tran 54.4 22 0.00075 31.2 5.9 33 207-243 87-122 (286)
493 3to5_A CHEY homolog; alpha(5)b 54.3 29 0.00099 26.3 6.1 40 204-243 72-115 (134)
494 1ydn_A Hydroxymethylglutaryl-C 54.1 21 0.00073 30.8 5.9 78 127-245 23-100 (295)
495 2qiw_A PEP phosphonomutase; st 54.0 22 0.00075 30.5 5.9 43 204-246 192-238 (255)
496 4djd_D C/Fe-SP, corrinoid/iron 54.0 58 0.002 28.9 8.8 83 71-158 128-222 (323)
497 1twd_A Copper homeostasis prot 53.6 95 0.0032 26.6 9.7 24 130-153 73-96 (256)
498 2qzj_A Two-component response 53.5 33 0.0011 24.9 6.2 40 205-244 64-104 (136)
499 1ydo_A HMG-COA lyase; TIM-barr 52.8 23 0.00077 31.1 5.9 43 206-248 190-239 (307)
500 4e4f_A Mannonate dehydratase; 52.8 6.6 0.00023 36.2 2.5 41 202-242 265-307 (426)
No 1
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=100.00 E-value=7e-73 Score=521.21 Aligned_cols=252 Identities=40% Similarity=0.572 Sum_probs=227.8
Q ss_pred CCChHHHHHHHHHhCCccccccccCCccchHHHHHHHHhccccceeccccccccccccccccCCcccccceeecccCCcc
Q 039466 5 PVNLNAFQELARLALPKMYYDFYAGGVENQYTLKENMEAFHGITFWPRILVDVCRIDISTSTLDYKISASIIIAPTGLHK 84 (263)
Q Consensus 5 ~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~~~l~pr~L~~v~~~d~st~~lG~~~~~Pi~iaP~~~~~ 84 (263)
++|++|||+.||++||+.+|+||+||++||.|+++|+++|++|+|+||+|+||+++||+|+|||+++++||+|||+|+++
T Consensus 2 ~~~~~d~~~~A~~~lp~~~~~Y~~~ga~~e~t~~~N~~af~~~~l~prvl~dv~~~d~~t~llG~~~~~P~~iaP~g~~~ 81 (352)
T 3sgz_A 2 LVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHS 81 (352)
T ss_dssp CCSHHHHHHHHHHTSCHHHHHHHHCCCTTCHHHHHHHHHHHTCCBCCCCSSCCSSCBCCEEETTEEESSSEEECCCSCGG
T ss_pred CCCHHHHHHHHHHHCCHHHHHHHhcCCcchHHHHHHHHHHHhceeeccccCCCCCCCCceEECCcccCCcceechHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc--------cccCHHHHHHHHHHHHHcCCCEEEEccCCCCC
Q 039466 85 LANPEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA--------AYKKRDMAATLVQRAERNGFMALVLTADTPRL 156 (263)
Q Consensus 85 l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~--------~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~ 156 (263)
|+||+||+++||||+++|++|++|+++++|+|||++++++ +++|++.++++++||+++||++|+||||+|+.
T Consensus 82 l~~~~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~ 161 (352)
T 3sgz_A 82 IAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVL 161 (352)
T ss_dssp GTCTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSC
T ss_pred hcCccHHHHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCC
Confidence 9999999999999999999999999999999999998873 67899999999999999999999999999999
Q ss_pred cchHHHHhhhhhhh---hhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEecCCHHHHHHH
Q 039466 157 DRREADIKNKMIAQ---QLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGVLTREDAIKA 233 (263)
Q Consensus 157 g~R~~d~r~~~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI~s~eDA~~a 233 (263)
|+|++|+||+|.+| +++++.... ...... .......++.++|++|+|||+.|++||++|||+++|||++|
T Consensus 162 g~R~~d~r~~~~~p~~~~~~~~~~~~----~~~~~~---~~~~~~~d~~~~w~~i~~lr~~~~~PvivK~v~~~e~A~~a 234 (352)
T 3sgz_A 162 GNRRRDKRNQLNLEANILKAALRALK----EEKPTQ---SVPVLFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELA 234 (352)
T ss_dssp CCCHHHHHHHHHSCHHHHTTCC----------------------CCCTTCCHHHHHHHHHHCCSCEEEEEECSHHHHHHH
T ss_pred CcchhhhhcCCCCCcccchhhhcccc----cccccc---hhhhhccCCCCCHHHHHHHHHhcCCCEEEEecCcHHHHHHH
Confidence 99999999999887 333332110 000001 11125678999999999999999999999999999999999
Q ss_pred HHcCCCEEEEcCCCCCCCCCchhhhccccC
Q 039466 234 VEVGVAGIIVSNHGARQLDYTPATISALEE 263 (263)
Q Consensus 234 ~~~G~dgI~VSNHGGRqlD~~~~~i~~Lpe 263 (263)
.++|+|+|+||||||||+|+.|+++++|++
T Consensus 235 ~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~ 264 (352)
T 3sgz_A 235 MKHNVQGIVVSNHGGRQLDEVSASIDALRE 264 (352)
T ss_dssp HHTTCSEEEECCGGGTSSCSSCCHHHHHHH
T ss_pred HHcCCCEEEEeCCCCCccCCCccHHHHHHH
Confidence 999999999999999999999999999874
No 2
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=100.00 E-value=2.2e-62 Score=459.01 Aligned_cols=262 Identities=41% Similarity=0.679 Sum_probs=228.7
Q ss_pred CCCCCChHHHHHHHHHhCCccccccccCCccchHHHHHHHHhccccceeccccccccccccccccCCcccccceeecccC
Q 039466 2 AAEPVNLNAFQELARLALPKMYYDFYAGGVENQYTLKENMEAFHGITFWPRILVDVCRIDISTSTLDYKISASIIIAPTG 81 (263)
Q Consensus 2 ~~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~~~l~pr~L~~v~~~d~st~~lG~~~~~Pi~iaP~~ 81 (263)
+..++|++|||+.||++||+.+|+||+||+++|.|+++|+++|++|+|+||+|++++++||+|+|||+++++||+|||||
T Consensus 24 ~~~~~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPmg 103 (392)
T 2nzl_A 24 LPRLICINDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATA 103 (392)
T ss_dssp --CCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHHHHHSCBCCCCSSCCTTCBCCEEETTEEESSSEEECCCS
T ss_pred cccCCCHHHHHHHHHhhCCHHHHhhcCCCCCccHHHHHHHHhhheEEeehhhccCCcCCCcceEECCEecCCceEecccc
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc--------cccCHHHHHHHHHHHHHcCCCEEEEccCC
Q 039466 82 LHKLANPEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA--------AYKKRDMAATLVQRAERNGFMALVLTADT 153 (263)
Q Consensus 82 ~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~--------~~~d~~~~~~li~ra~~aG~~al~vTvD~ 153 (263)
++++.||++|.++|++|+++|++|++|+++++++|+|++..++ +++|++.+.++++||+++||++|+||+|+
T Consensus 104 ~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~ 183 (392)
T 2nzl_A 104 MQRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDT 183 (392)
T ss_dssp CGGGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHCTTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSC
T ss_pred ccccccchHHHHHHHHHHHcCCCeeccchHHHHHHHHHHhcCCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 9999999999999999999999999999999999999887543 34799999999999999999999999999
Q ss_pred CCCcchHHHHhhhhhhh---hhhhhhhccc--cCCCC-CCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEecCCH
Q 039466 154 PRLDRREADIKNKMIAQ---QLKNLEGLLS--TKVTS-DTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGVLTR 227 (263)
Q Consensus 154 ~~~g~R~~d~r~~~~~p---~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI~s~ 227 (263)
|+.|+|++|+|++|.+| +++++.+... ....+ ........+++.++++.++|++|+|||+.|++||++|||+++
T Consensus 184 p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~~ 263 (392)
T 2nzl_A 184 PYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRG 263 (392)
T ss_dssp SSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEECCH
T ss_pred CCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEecCCH
Confidence 99999999999999877 1223211000 00000 111224467777889999999999999999999999999999
Q ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCCchhhhccccC
Q 039466 228 EDAIKAVEVGVAGIIVSNHGARQLDYTPATISALEE 263 (263)
Q Consensus 228 eDA~~a~~~G~dgI~VSNHGGRqlD~~~~~i~~Lpe 263 (263)
|||+++.++|+|+|+||||||||+|+.|+++++|++
T Consensus 264 e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~ 299 (392)
T 2nzl_A 264 DDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPE 299 (392)
T ss_dssp HHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHH
Confidence 999999999999999999999999999999998864
No 3
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=100.00 E-value=1.3e-61 Score=450.62 Aligned_cols=257 Identities=32% Similarity=0.447 Sum_probs=216.7
Q ss_pred CCCCChHHHHHHHHHhCCccccccccCCccchHHHHHHHHhccccceeccccccccccccccccCCcccccceeecccCC
Q 039466 3 AEPVNLNAFQELARLALPKMYYDFYAGGVENQYTLKENMEAFHGITFWPRILVDVCRIDISTSTLDYKISASIIIAPTGL 82 (263)
Q Consensus 3 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~~~l~pr~L~~v~~~d~st~~lG~~~~~Pi~iaP~~~ 82 (263)
..++|++|||+.||++||+.+|+||+||+++|.|+++|+++|++|+|+||+|++++++||+|+|||+++++||+||||++
T Consensus 11 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPma~ 90 (368)
T 2nli_A 11 IDVVNTYDLEEEASKVVPHGGFNYIAGASGDEWTKRANDRAWKHKLLYPRLAQDVEAPDTSTEILGHKIKAPFIMAPIAA 90 (368)
T ss_dssp CCCSCSHHHHHHHHTTSCHHHHHHHHCCSBTSHHHHHHHHGGGGEEECCCCCCCCSCCCCCEEETTEEESSSEEECCCSC
T ss_pred ccCCCHHHHHHHHHHhCCHHHHhhcccCCCccHHHHHHHHHHhheeeeccccCCCccCCcceEECCEecCCceeecchhh
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc--------cccCHHHHHHHHHHHHHcCCCEEEEccCCC
Q 039466 83 HKLANPEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA--------AYKKRDMAATLVQRAERNGFMALVLTADTP 154 (263)
Q Consensus 83 ~~l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~--------~~~d~~~~~~li~ra~~aG~~al~vTvD~~ 154 (263)
+++.||++|.++|++|+++|++|++|+++++++|+|++..++ +++|++.+.++++||+++||++|+||+|+|
T Consensus 91 ~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p 170 (368)
T 2nli_A 91 HGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADST 170 (368)
T ss_dssp GGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHHTTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC
T ss_pred ccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHHHHHhCCCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 999999999999999999999999999999999999876542 347999999999999999999999999999
Q ss_pred CCcchHHHHhhhhhhh-hhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEecCCHHHHHHH
Q 039466 155 RLDRREADIKNKMIAQ-QLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGVLTREDAIKA 233 (263)
Q Consensus 155 ~~g~R~~d~r~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI~s~eDA~~a 233 (263)
+.|+|++|+|++|.+| +++++... ..+ .. ....+ ++++.+.++.++|++|+|||+.|++||++|||+++|||++|
T Consensus 171 ~~g~r~~d~~~~~~~p~~~~~~~~~-~~~-~~-~g~~l-~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v~~~e~a~~a 246 (368)
T 2nli_A 171 VSGNRDRDVKNKFVYPFGMPIVQRY-LRG-TA-EGMSL-NNIYGASKQKISPRDIEEIAGHSGLPVFVKGIQHPEDADMA 246 (368)
T ss_dssp ---CBC--------CCSCCHHHHHH-HTT-SG-GGC------CTTBCSBCCHHHHHHHHHHSSSCEEEEEECSHHHHHHH
T ss_pred cccchhHHHhhcccCcchhhhhhcc-ccc-CC-CCchH-HhhhhccCchhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHH
Confidence 9999999999999766 22232100 000 00 01111 34455668899999999999999999999999999999999
Q ss_pred HHcCCCEEEEcCCCCCCCCCchhhhccccC
Q 039466 234 VEVGVAGIIVSNHGARQLDYTPATISALEE 263 (263)
Q Consensus 234 ~~~G~dgI~VSNHGGRqlD~~~~~i~~Lpe 263 (263)
.++|+|+|+||||||||+|+.|+++++|++
T Consensus 247 ~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~ 276 (368)
T 2nli_A 247 IKRGASGIWVSNHGARQLYEAPGSFDTLPA 276 (368)
T ss_dssp HHTTCSEEEECCGGGTSCSSCCCHHHHHHH
T ss_pred HHcCCCEEEEcCCCcCCCCCCCChHHHHHH
Confidence 999999999999999999999999998864
No 4
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=100.00 E-value=4.7e-60 Score=442.01 Aligned_cols=262 Identities=36% Similarity=0.605 Sum_probs=228.1
Q ss_pred CCCCCCChHHHHHHHHHhCCccccccccCCccchHHHHHHHHhccccceeccccccccccccccccCCcccccceeeccc
Q 039466 1 MAAEPVNLNAFQELARLALPKMYYDFYAGGVENQYTLKENMEAFHGITFWPRILVDVCRIDISTSTLDYKISASIIIAPT 80 (263)
Q Consensus 1 ~~~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~~~l~pr~L~~v~~~d~st~~lG~~~~~Pi~iaP~ 80 (263)
|...++|++|||+.||++||+.+|+||+||++||.|+++|+.+|++|+|+||+|+|++++||+|+|||+++++||+||||
T Consensus 1 ~~~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pv~iap~ 80 (380)
T 1p4c_A 1 MSQNLFNVEDYRKLAQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPT 80 (380)
T ss_dssp ---CCSSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSSCBCCEEETTEEESSSEEECCC
T ss_pred CCCcCCCHHHHHHHHHHhCCHHHHHHhCCCCCccHHHHHHHHHHhheeeeccccCCCccCcceeEECCeecCCceEecCc
Confidence 67789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc-------cccCHHHHHHHHHHHHHcCCCEEEEccCC
Q 039466 81 GLHKLANPEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA-------AYKKRDMAATLVQRAERNGFMALVLTADT 153 (263)
Q Consensus 81 ~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~-------~~~d~~~~~~li~ra~~aG~~al~vTvD~ 153 (263)
++++++||++|.++|++|+++|++|++|+++++++|+|++...+ +++ ++...+++++|+++||++++||||+
T Consensus 81 ~~~~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~~~~~~~~~fQly~~~-~~~~~~~i~~a~~aG~~al~vTvd~ 159 (380)
T 1p4c_A 81 GLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIH-REIAQGMVLKALHTGYTTLVLTTDV 159 (380)
T ss_dssp SCGGGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHCCSCEEEEECCSS-HHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred cccccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHHhccCCCeEEEEEech-HHHHHHHHHHHHHcCCCEEEEeecC
Confidence 99999999999999999999999999999999999999876332 336 8999999999999999999999999
Q ss_pred CCCcchHHHHhhhhhhh---hhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEecCCHHHH
Q 039466 154 PRLDRREADIKNKMIAQ---QLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGVLTREDA 230 (263)
Q Consensus 154 ~~~g~R~~d~r~~~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI~s~eDA 230 (263)
|+.|+|++|+++++..| +..++....+.++.+....+...+....+++.++|+.|+|+++.+++||++|||++++||
T Consensus 160 p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i~~~~~~Pv~vkgv~t~e~a 239 (380)
T 1p4c_A 160 AVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGLLSAEDA 239 (380)
T ss_dssp SSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHHHHHCCSEEEEEEECCHHHH
T ss_pred ccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHHHHhcCCCEEEEecCcHHHH
Confidence 99999999999999755 222221000111211222223334444568999999999999999999999999999999
Q ss_pred HHHHHcCCCEEEEcCCCCCCCCCchhhhccccC
Q 039466 231 IKAVEVGVAGIIVSNHGARQLDYTPATISALEE 263 (263)
Q Consensus 231 ~~a~~~G~dgI~VSNHGGRqlD~~~~~i~~Lpe 263 (263)
+++.++|||+|+||||||||+|+.+++++.|++
T Consensus 240 ~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~ 272 (380)
T 1p4c_A 240 DRCIAEGADGVILSNHGGRQLDCAISPMEVLAQ 272 (380)
T ss_dssp HHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHH
T ss_pred HHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHH
Confidence 999999999999999999999999999988763
No 5
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=100.00 E-value=4.9e-59 Score=433.84 Aligned_cols=259 Identities=57% Similarity=0.875 Sum_probs=229.9
Q ss_pred CCCChHHHHHHHHHhCCccccccccCCccchHHHHHHHHhccccceeccccccccccccccccCCcccccceeecccCCc
Q 039466 4 EPVNLNAFQELARLALPKMYYDFYAGGVENQYTLKENMEAFHGITFWPRILVDVCRIDISTSTLDYKISASIIIAPTGLH 83 (263)
Q Consensus 4 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~~~l~pr~L~~v~~~d~st~~lG~~~~~Pi~iaP~~~~ 83 (263)
.++|++|||+.||++||+.+|+||+||+++|.|+++|+++|++|+|+||+|++++++||+|+|||+++++||+|||||++
T Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~~d~~t~i~G~~~~~Pi~iAPmg~~ 82 (370)
T 1gox_A 3 EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQ 82 (370)
T ss_dssp CCCSTTHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSCCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHhhhCCCCCccHHHHHHHHHHhhheeeccccCCCCCCCCceEECCcccCCceeEcccchh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc-------cccCHHHHHHHHHHHHHcCCCEEEEccCCCCC
Q 039466 84 KLANPEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA-------AYKKRDMAATLVQRAERNGFMALVLTADTPRL 156 (263)
Q Consensus 84 ~l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~-------~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~ 156 (263)
.+.||++|.++|++|+++|++|++|+++++++|||+++.++ +.+|++.+.+++++++++|+++|.||+|+|+.
T Consensus 83 ~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~ 162 (370)
T 1gox_A 83 KMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (370)
T ss_dssp GGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred hhccchHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcc
Confidence 99999999999999999999999999999999999987553 35799999999999999999999999999999
Q ss_pred cchHHHHhhhhhhh---hhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEecCCHHHHHHH
Q 039466 157 DRREADIKNKMIAQ---QLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGVLTREDAIKA 233 (263)
Q Consensus 157 g~R~~d~r~~~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI~s~eDA~~a 233 (263)
|+|++|+|++|.+| +++++.................++++++.++.++|++|+|+++.|++||++||++++++|+.|
T Consensus 163 g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~~~e~a~~a 242 (370)
T 1gox_A 163 GRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLA 242 (370)
T ss_dssp CCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCSHHHHHHH
T ss_pred cccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEEEecCCHHHHHHH
Confidence 99999999999766 222322100000001111223456777889999999999999999999999999999999999
Q ss_pred HHcCCCEEEEcCCCCCCCCCchhhhcccc
Q 039466 234 VEVGVAGIIVSNHGARQLDYTPATISALE 262 (263)
Q Consensus 234 ~~~G~dgI~VSNHGGRqlD~~~~~i~~Lp 262 (263)
.++|+|+|+||||||||+|+.+++++.|+
T Consensus 243 ~~~Gad~I~vs~~ggr~~~~~~~~~~~l~ 271 (370)
T 1gox_A 243 VQHGAAGIIVSNHGARQLDYVPATIMALE 271 (370)
T ss_dssp HHTTCSEEEECCGGGTSSTTCCCHHHHHH
T ss_pred HHcCCCEEEECCCCCccCCCcccHHHHHH
Confidence 99999999999999999999999988775
No 6
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=100.00 E-value=1.4e-58 Score=446.08 Aligned_cols=258 Identities=39% Similarity=0.620 Sum_probs=226.9
Q ss_pred CCCCChHHHHHHHHHhCCccccccccCCccchHHHHHHHHhccccceeccccccccccccccccCCcccccceeecccCC
Q 039466 3 AEPVNLNAFQELARLALPKMYYDFYAGGVENQYTLKENMEAFHGITFWPRILVDVCRIDISTSTLDYKISASIIIAPTGL 82 (263)
Q Consensus 3 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~~~l~pr~L~~v~~~d~st~~lG~~~~~Pi~iaP~~~ 82 (263)
..++|++|||+.||++||+.+|+||.+|+++|.|+++|+++|++|+|+||+|++++++||+|+|||+++++||+||||++
T Consensus 120 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~i~l~pr~L~dv~~~d~st~i~G~~l~~Pi~iAPma~ 199 (511)
T 1kbi_A 120 DNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATAL 199 (511)
T ss_dssp GGCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSC
T ss_pred cccCCHHHHHHHHHhhCCHHHhhhccCCCCchhHHHHHHHHhhhhccccccccCcccccCccccCCccCCCCeEeccchh
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCC-hhHHHHHHHHHH--CCCceeecCCCCccHHHHHHhcc--c--------cccCHHHHHHHHHHHHHcCCCEEEE
Q 039466 83 HKLANP-EGEVATARAAAS--CNTIMVLSFTSSCSIEEVAASCN--A--------AYKKRDMAATLVQRAERNGFMALVL 149 (263)
Q Consensus 83 ~~l~~~-~ge~a~AraA~~--~gi~~~lss~s~~sieeV~~~~~--~--------~~~d~~~~~~li~ra~~aG~~al~v 149 (263)
++++|| ++|+++|++|++ +|++|++|+.+++|+|+|++..+ . +.+|++.+.++++||+++||++|+|
T Consensus 200 ~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~i 279 (511)
T 1kbi_A 200 CKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFV 279 (511)
T ss_dssp GGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEE
T ss_pred ccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEE
Confidence 999999 999999999999 99999999999999999988762 2 3689999999999999999999999
Q ss_pred ccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEecCCHHH
Q 039466 150 TADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGVLTRED 229 (263)
Q Consensus 150 TvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI~s~eD 229 (263)
|+|+|+.|+|++++|++|..|. ........... ....+...++....++.++|++|+|||+.|++||++|||.++||
T Consensus 280 tvd~p~~g~R~~~~r~g~~~p~-~~~~~~~g~~~--~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~~e~ 356 (511)
T 1kbi_A 280 TVDAPSLGQREKDMKLKFSNTK-AGPKAMKKTNV--EESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQRTED 356 (511)
T ss_dssp ECSCSSCCCCHHHHHHHHTTCC--------CCCC--SSCCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEEEECSHHH
T ss_pred eCCCCCccccHHHHhccCCCCc-ccccccccccc--cccccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEEeCCCHHH
Confidence 9999999999999999997761 01110000000 00112223334456889999999999999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCchhhhccccC
Q 039466 230 AIKAVEVGVAGIIVSNHGARQLDYTPATISALEE 263 (263)
Q Consensus 230 A~~a~~~G~dgI~VSNHGGRqlD~~~~~i~~Lpe 263 (263)
|++|.++|||+|+||||||||+|+.++++++|++
T Consensus 357 A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~ 390 (511)
T 1kbi_A 357 VIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAE 390 (511)
T ss_dssp HHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHH
Confidence 9999999999999999999999999999988863
No 7
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.97 E-value=6.2e-32 Score=250.28 Aligned_cols=183 Identities=18% Similarity=0.215 Sum_probs=132.4
Q ss_pred Hhccccceeccccc--cccccccccccCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCceeecCCCCccHHH--
Q 039466 42 EAFHGITFWPRILV--DVCRIDISTSTLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLSFTSSCSIEE-- 117 (263)
Q Consensus 42 ~af~~~~l~pr~L~--~v~~~d~st~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~siee-- 117 (263)
..|++|+|+|+.|+ +++++||+|+|||+++++||+|+||++....+++.+.++|++|+++|++|++|+++.. +|+
T Consensus 54 ~~fd~i~l~~~~lP~~~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~-le~~~ 132 (365)
T 3sr7_A 54 NSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTA-LKNPD 132 (365)
T ss_dssp CGGGGEEECCCSSCCSCGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------
T ss_pred CCcceEEEECCCCCcCCcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeeccccccc-ccCcc
Confidence 58999999999995 7799999999999999999999999999988899999999999999999999999853 343
Q ss_pred -----HHHhccc--cccCHH---HHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCC
Q 039466 118 -----VAASCNA--AYKKRD---MAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDT 187 (263)
Q Consensus 118 -----V~~~~~~--~~~d~~---~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~ 187 (263)
|.+..|+ ++.|-. ..++..+.++.+|+++|.+++|..+
T Consensus 133 ~~~~~v~r~~P~~~~ianig~~~~~e~~~~~ve~~~adal~ihln~~q-------------------------------- 180 (365)
T 3sr7_A 133 DTSYQVKKSRPHLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINLMQ-------------------------------- 180 (365)
T ss_dssp ------------CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEECHHH--------------------------------
T ss_pred ccceEehhhCCCCcEEEEeCCCCCHHHHHHHHHhcCCCEEEEeccccc--------------------------------
Confidence 3333343 111110 1224455567889999999998421
Q ss_pred CccHHHHHHHhcCCCC-CH-HHHHHHHhhcCCCEEEEec---CCHHHHHHHHHcCCCEEEEcCCCCCCC-----------
Q 039466 188 GSNLEAYAKETMDPSL-SW-KDIEWLRSITNLPILIKGV---LTREDAIKAVEVGVAGIIVSNHGARQL----------- 251 (263)
Q Consensus 188 ~~~~~~~~~~~~~~~~-~W-~dl~~lr~~~~lPiilKGI---~s~eDA~~a~~~G~dgI~VSNHGGRql----------- 251 (263)
+..++..+.++ +| +.|+|||+.|++||++||| +++++|+++.++|||+|+|+||||+++
T Consensus 181 -----e~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~ 255 (365)
T 3sr7_A 181 -----ELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNR 255 (365)
T ss_dssp -----HHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC--------------C
T ss_pred -----cccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccc
Confidence 22233456677 78 5799999999999999999 999999999999999999999999987
Q ss_pred ----CCchhhhcccc
Q 039466 252 ----DYTPATISALE 262 (263)
Q Consensus 252 ----D~~~~~i~~Lp 262 (263)
|..++++++|+
T Consensus 256 ~~~~~~g~pt~~~L~ 270 (365)
T 3sr7_A 256 SYLNQWGQTTAQVLL 270 (365)
T ss_dssp GGGTTCSCBHHHHHH
T ss_pred cccccccccHHHHHH
Confidence 66777777775
No 8
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.97 E-value=2.8e-32 Score=255.18 Aligned_cols=220 Identities=15% Similarity=0.143 Sum_probs=167.6
Q ss_pred HhCCccccccccCCccchHHHHHHHHhccccceecc-ccccccccccccccCCcccccceeecccCCcccCCChhHHHHH
Q 039466 17 LALPKMYYDFYAGGVENQYTLKENMEAFHGITFWPR-ILVDVCRIDISTSTLDYKISASIIIAPTGLHKLANPEGEVATA 95 (263)
Q Consensus 17 ~~l~~~~~~y~~~ga~~e~t~~~N~~af~~~~l~pr-~L~~v~~~d~st~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~A 95 (263)
.+||+..|+||.+|++++ ++|..+|++|+|+|| ++++++++||+|+|||++++.||++|||+ ++.|+ ++|
T Consensus 14 ~~~~~~~~~~~~~~~~~~---~~~~~~fd~v~l~p~~~~~~~~~vdlst~l~g~~l~~Pii~Apm~--g~~~~----~~a 84 (393)
T 2qr6_A 14 NLYFQGMRDHVEIGIGRE---ARRTYSLDDISVVSSRRTRSSKDVDTTWHIDAYKFDLPFMNHPSD--ALASP----EFV 84 (393)
T ss_dssp CHHHHHHHHEEEEETTEE---EECCCCGGGEEECCCSCCCCGGGCBCCEEETTEEESSSEEECCCT--TTCCH----HHH
T ss_pred cccccchHHHHhcccccc---cccCCChhhEEEccCCCCCChhHCCceeEEcccccCCCeEeCCCC--CcccH----HHH
Confidence 578999999999999999 468899999999998 89999999999999999999999999998 45565 599
Q ss_pred HHHHHCCCceeecC--------CCCccHHHHHHhcc-------c-------ccc-CHHHHHHHHHHHHHcCCCEEEEccC
Q 039466 96 RAAASCNTIMVLSF--------TSSCSIEEVAASCN-------A-------AYK-KRDMAATLVQRAERNGFMALVLTAD 152 (263)
Q Consensus 96 raA~~~gi~~~lss--------~s~~sieeV~~~~~-------~-------~~~-d~~~~~~li~ra~~aG~~al~vTvD 152 (263)
++++++|.++++++ .++.++|+|++... . +.+ |++...+++++++++|+.+++-
T Consensus 85 ~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~~~~i~~~~~~g~~v~~~--- 161 (393)
T 2qr6_A 85 IEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELLSERIAQVRDSGEIVAVR--- 161 (393)
T ss_dssp HHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSCCEEE---
T ss_pred HHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHHHHHHHHHhhcCCeEEEE---
Confidence 99999999999998 55678888876543 1 123 8999999999999999887762
Q ss_pred CCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEecCCHHHHHH
Q 039466 153 TPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGVLTREDAIK 232 (263)
Q Consensus 153 ~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI~s~eDA~~ 232 (263)
+.+.+..+....+.-... .+..++.... . .....+..+|++|+|+++.|++|||+|||.+++||++
T Consensus 162 --v~~~~~~e~a~~~~~aga-d~i~i~~~~~-------~----~~~~~~~~~~~~i~~l~~~~~~pvi~ggi~t~e~a~~ 227 (393)
T 2qr6_A 162 --VSPQNVREIAPIVIKAGA-DLLVIQGTLI-------S----AEHVNTGGEALNLKEFIGSLDVPVIAGGVNDYTTALH 227 (393)
T ss_dssp --ECTTTHHHHHHHHHHTTC-SEEEEECSSC-------C----SSCCCC-----CHHHHHHHCSSCEEEECCCSHHHHHH
T ss_pred --eCCccHHHHHHHHHHCCC-CEEEEeCCcc-------c----cccCCCcccHHHHHHHHHhcCCCEEECCcCCHHHHHH
Confidence 223444444432211000 0000000000 0 0012233589999999999999999999999999999
Q ss_pred HHHcCCCEEEEcC--CCCCCCCCc-hhhhcccc
Q 039466 233 AVEVGVAGIIVSN--HGARQLDYT-PATISALE 262 (263)
Q Consensus 233 a~~~G~dgI~VSN--HGGRqlD~~-~~~i~~Lp 262 (263)
+.++|||+|+||| ||||++++. +++++.|+
T Consensus 228 ~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~ 260 (393)
T 2qr6_A 228 MMRTGAVGIIVGGGENTNSLALGMEVSMATAIA 260 (393)
T ss_dssp HHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHH
T ss_pred HHHcCCCEEEECCCcccccccCCCCCChHHHHH
Confidence 9999999999999 999999985 88888775
No 9
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.97 E-value=5.1e-32 Score=248.30 Aligned_cols=196 Identities=18% Similarity=0.228 Sum_probs=132.0
Q ss_pred cccccCCccchHHHHHHHHhccccceeccccc--cccccccccccCCcccccceeecccCCcccCCChhH---HHHHHHH
Q 039466 24 YDFYAGGVENQYTLKENMEAFHGITFWPRILV--DVCRIDISTSTLDYKISASIIIAPTGLHKLANPEGE---VATARAA 98 (263)
Q Consensus 24 ~~y~~~ga~~e~t~~~N~~af~~~~l~pr~L~--~v~~~d~st~~lG~~~~~Pi~iaP~~~~~l~~~~ge---~a~AraA 98 (263)
.+|+..+.+++.|+++|+.+|++|+|+||+|+ +++++||+|+|||++++.||+||||++ +|+.+| .++|++|
T Consensus 8 ~~hi~~~~~~~~~~~~~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~l~~P~~iapm~g---~~~~~~~~~~~la~~a 84 (332)
T 1vcf_A 8 RKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFLIGAMTG---GEENGERINLALAEAA 84 (332)
T ss_dssp ---------------CCCCSGGGEEECCCTTCCCCGGGCCCCEEETTEEESSSEEECCCC------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccccchhhhhhcEEehhhCCCCCCCCCCcceEECCcccCCceEEecccc---CCcchhHHHHHHHHHH
Confidence 48999999999999999999999999999999 889999999999999999999999985 367765 7999999
Q ss_pred HHCCCceeecCCCCccHHHHH--------Hhccc--cccCHH------H-HHHHHHHHHHcCCCEEEEccCCCCCcchHH
Q 039466 99 ASCNTIMVLSFTSSCSIEEVA--------ASCNA--AYKKRD------M-AATLVQRAERNGFMALVLTADTPRLDRREA 161 (263)
Q Consensus 99 ~~~gi~~~lss~s~~sieeV~--------~~~~~--~~~d~~------~-~~~li~ra~~aG~~al~vTvD~~~~g~R~~ 161 (263)
+++|++|++|++++. +|+.. ...++ +..+++ . ...+.+.++..+++++.++++.
T Consensus 85 ~~~G~~~~~~~~~~~-le~~~~~~~~ql~~~~~d~pv~~~~~~~q~~~~~~~~~~~a~~~~~~~a~~i~~n~-------- 155 (332)
T 1vcf_A 85 EALGVGMMLGSGRIL-LERPEALRSFRVRKVAPKALLIANLGLAQLRRYGRDDLLRLVEMLEADALAFHVNP-------- 155 (332)
T ss_dssp HHHTCEEEEEECHHH-HHCTTTHHHHCCTTTCSSSCEEEEEEGGGGGTCCHHHHHHHHHHHTCSEEEEECCH--------
T ss_pred HHcCCCEEeCCchhc-ccCCCccceEEeeccCCCceeecccChhhhhccChHHHHHHHhhcCCCceeeccch--------
Confidence 999999999999875 66421 00000 000000 0 0111122223344444444431
Q ss_pred HHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCC--CHHHHHHHHhhcCCCEEEEec---CCHHHHHHHHHc
Q 039466 162 DIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSL--SWKDIEWLRSITNLPILIKGV---LTREDAIKAVEV 236 (263)
Q Consensus 162 d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~W~dl~~lr~~~~lPiilKGI---~s~eDA~~a~~~ 236 (263)
.+++++ ..+..+ .|+.++|+|+ |++||++|+| ++++||+++.++
T Consensus 156 -----------------------------~~~~~~-~~~~~~~~~~~~i~~vr~-~~~Pv~vK~v~~g~~~e~a~~~~~~ 204 (332)
T 1vcf_A 156 -----------------------------LQEAVQ-RGDTDFRGLVERLAELLP-LPFPVMVKEVGHGLSREAALALRDL 204 (332)
T ss_dssp -----------------------------HHHHHT-TSCCCCTTHHHHHHHHCS-CSSCEEEECSSSCCCHHHHHHHTTS
T ss_pred -----------------------------HHHHhc-CCCccHHHHHHHHHHHHc-CCCCEEEEecCCCCCHHHHHHHHHc
Confidence 122222 222222 3899999999 9999999999 999999999999
Q ss_pred CCCEEEEcCCCC---------CC---------CCCchhhhcccc
Q 039466 237 GVAGIIVSNHGA---------RQ---------LDYTPATISALE 262 (263)
Q Consensus 237 G~dgI~VSNHGG---------Rq---------lD~~~~~i~~Lp 262 (263)
|+|+|+|||||| || +|+++++++.|+
T Consensus 205 G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 248 (332)
T 1vcf_A 205 PLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAIL 248 (332)
T ss_dssp CCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHH
T ss_pred CCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHH
Confidence 999999999999 87 899999988775
No 10
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.95 E-value=2.4e-28 Score=225.13 Aligned_cols=181 Identities=23% Similarity=0.210 Sum_probs=134.7
Q ss_pred HHhccccceeccccc--cccccccccccCCcccccceeecccC-CcccCCChhHHHHHHHHHHCCCceeecCCCCccHHH
Q 039466 41 MEAFHGITFWPRILV--DVCRIDISTSTLDYKISASIIIAPTG-LHKLANPEGEVATARAAASCNTIMVLSFTSSCSIEE 117 (263)
Q Consensus 41 ~~af~~~~l~pr~L~--~v~~~d~st~~lG~~~~~Pi~iaP~~-~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~siee 117 (263)
+++|++|+|+||+|+ +++++|++|+|||++++.||++|||+ +++..++++|.++|++|+++|++|++|++++. +|+
T Consensus 22 ~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~-l~~ 100 (349)
T 1p0k_A 22 ETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA-LKD 100 (349)
T ss_dssp CCSGGGEEECCCSCCCCCGGGCBCCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT-TTC
T ss_pred cCccceEEEEccccCCCCcccCCceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc-ccC
Confidence 568999999999999 78999999999999999999999984 44234467799999999999999999998765 433
Q ss_pred ---------HHHhccc------cc--cCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccc
Q 039466 118 ---------VAASCNA------AY--KKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLS 180 (263)
Q Consensus 118 ---------V~~~~~~------~~--~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~ 180 (263)
+....++ +. .+.+. +.+.++.+|+++|.+++++|.. +
T Consensus 101 ~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~---~~~~~~~~gad~i~i~~~~~~~----------~------------- 154 (349)
T 1p0k_A 101 PSERLSYEIVRKENPNGLIFANLGSEATAAQ---AKEAVEMIGANALQIHLNVIQE----------I------------- 154 (349)
T ss_dssp HHHHHHHHHHHHHCSSSCEEEEEETTCCHHH---HHHHHHHTTCSEEEEEECTTTT----------C-------------
T ss_pred cccccceehhhhhCCCceeEEeecCCCCHHH---HHHHHHhcCCCeEEecccchhh----------h-------------
Confidence 2333332 22 23332 3344567899999999987631 0
Q ss_pred cCCCCCCCccHHHHHHHhcCCCCC-H-HHHHHHHhhcCCCEEEEec---CCHHHHHHHHHcCCCEEEEcCCCC-------
Q 039466 181 TKVTSDTGSNLEAYAKETMDPSLS-W-KDIEWLRSITNLPILIKGV---LTREDAIKAVEVGVAGIIVSNHGA------- 248 (263)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~-W-~dl~~lr~~~~lPiilKGI---~s~eDA~~a~~~G~dgI~VSNHGG------- 248 (263)
.++..++.++ | +.++|+|+.+++||++||+ +++++|+.|.++|+|+|+||||||
T Consensus 155 --------------~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e 220 (349)
T 1p0k_A 155 --------------VMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIE 220 (349)
T ss_dssp ----------------------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC----------
T ss_pred --------------cCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHH
Confidence 0011244553 4 6799999999999999988 999999999999999999999999
Q ss_pred --CC-------CCCchhhhcccc
Q 039466 249 --RQ-------LDYTPATISALE 262 (263)
Q Consensus 249 --Rq-------lD~~~~~i~~Lp 262 (263)
|+ +++++++.+.|+
T Consensus 221 ~~r~~~~~~~~~~~g~~~~~~l~ 243 (349)
T 1p0k_A 221 NLRRQRQISFFNSWGISTAASLA 243 (349)
T ss_dssp -----CCGGGGTTCSCCHHHHHH
T ss_pred HhhcccchhhhhccCccHHHHHH
Confidence 77 588888877664
No 11
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.95 E-value=4.1e-28 Score=225.17 Aligned_cols=171 Identities=12% Similarity=0.094 Sum_probs=132.0
Q ss_pred Hhccccceeccccc--cccccccccccCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCceeecCCCCc------
Q 039466 42 EAFHGITFWPRILV--DVCRIDISTSTLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLSFTSSC------ 113 (263)
Q Consensus 42 ~af~~~~l~pr~L~--~v~~~d~st~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~------ 113 (263)
+.|++|+|.|+.|+ +++++||+|+|||++++.||+|+||++......+.+..+|++|+++|++|++|+++..
T Consensus 27 ~~~~~v~l~~~~lp~~~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~ 106 (368)
T 3vkj_A 27 TFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEA 106 (368)
T ss_dssp CSGGGEEECCCSSCBSBGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGG
T ss_pred CCcceEEEEcCCCCccCcccccceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHH
Confidence 57999999999999 7899999999999999999999999875443335566999999999999999999532
Q ss_pred --cHHHHHHhccc---------cc----cCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhc
Q 039466 114 --SIEEVAASCNA---------AY----KKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGL 178 (263)
Q Consensus 114 --sieeV~~~~~~---------~~----~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~ 178 (263)
+.+-|++.+|+ ++ .+.+... +.++.+++.++.|+++..
T Consensus 107 ~~s~~~vr~~ap~~~~~anlg~~ql~~~~~~~~~~---~av~~~~a~al~Ihln~~------------------------ 159 (368)
T 3vkj_A 107 RESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQ---DAIQMIEADAIAVHLNPA------------------------ 159 (368)
T ss_dssp SHHHHHHHHHCSSSCEEEEEEGGGGGTTCCHHHHH---HHHHHTTCSEEEEECCHH------------------------
T ss_pred HhhHHHHHHhCcCcceecCcCeeecCCCCCHHHHH---HHHHHhcCCCeEEEecch------------------------
Confidence 22225555554 11 1223222 334556788999988721
Q ss_pred cccCCCCCCCccHHHHHHHhcCCCCC---HHHHHHHHhhcCCCEEEEec---CCHHHHHHHHHcCCCEEEEcCCCC----
Q 039466 179 LSTKVTSDTGSNLEAYAKETMDPSLS---WKDIEWLRSITNLPILIKGV---LTREDAIKAVEVGVAGIIVSNHGA---- 248 (263)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~---W~dl~~lr~~~~lPiilKGI---~s~eDA~~a~~~G~dgI~VSNHGG---- 248 (263)
++.+++..+..+. |+.|++|++.+++||++||| +++++|+++.++|||+|+||||||
T Consensus 160 -------------~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~GGt~~~ 226 (368)
T 3vkj_A 160 -------------QEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWI 226 (368)
T ss_dssp -------------HHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCBTSBCHH
T ss_pred -------------hhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCCCCCccc
Confidence 1222223345554 67899999999999999998 999999999999999999999999
Q ss_pred -----CCCC
Q 039466 249 -----RQLD 252 (263)
Q Consensus 249 -----RqlD 252 (263)
|++|
T Consensus 227 ~iE~~R~~~ 235 (368)
T 3vkj_A 227 AIEMIRDIR 235 (368)
T ss_dssp HHHHHHHHH
T ss_pred chhhhhccc
Confidence 8875
No 12
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.92 E-value=3.7e-25 Score=204.34 Aligned_cols=157 Identities=15% Similarity=0.082 Sum_probs=134.2
Q ss_pred hccccceecccccccc--ccc--cccccCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCceeecCCCCccHHHH
Q 039466 43 AFHGITFWPRILVDVC--RID--ISTSTLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLSFTSSCSIEEV 118 (263)
Q Consensus 43 af~~~~l~pr~L~~v~--~~d--~st~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV 118 (263)
+|++|.|+||.+++++ ++| ++|+|+|++++.||++||| |+.+|.++|++++++|.+++++++ +++|++
T Consensus 9 ~fddv~l~P~~~~~~~r~~vd~~~~t~l~g~~l~~Pii~ApM------~~vte~~lA~A~a~~Gg~gvi~~~--~s~ee~ 80 (361)
T 3r2g_A 9 TFDDVLLVPSYNHHESRRVVETTSTDRLGKLTLNLPVISANM------DTITESNMANFMHSKGAMGALHRF--MTIEEN 80 (361)
T ss_dssp CGGGEEECCCCCCSCTTCCCCCCEECTTSSCEESSCEEECCS------TTTCSHHHHHHHHHTTCEEBCCSC--SCHHHH
T ss_pred ccceEEEECCCCCCCccccccceeeEEECCEEcCCCEEECCC------CCchHHHHHHHHHHcCCCEEEeCC--CCHHHH
Confidence 7999999999999887 766 5559999999999999997 688999999999999999999975 789998
Q ss_pred HHhccc-------cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccH
Q 039466 119 AASCNA-------AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNL 191 (263)
Q Consensus 119 ~~~~~~-------~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~ 191 (263)
++.... ...+++.+.+.++++.++|++ +|++|++. |.
T Consensus 81 ~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvd--vI~id~a~-G~--------------------------------- 124 (361)
T 3r2g_A 81 IQEFKKCKGPVFVSVGCTENELQRAEALRDAGAD--FFCVDVAH-AH--------------------------------- 124 (361)
T ss_dssp HHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCC--EEEEECSC-CS---------------------------------
T ss_pred HHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCC--EEEEeCCC-CC---------------------------------
Confidence 866432 346777888999999999999 55667543 11
Q ss_pred HHHHHHhcCCCCCHHHHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEcCCCCCCCC
Q 039466 192 EAYAKETMDPSLSWKDIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVSNHGARQLD 252 (263)
Q Consensus 192 ~~~~~~~~~~~~~W~dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VSNHGGRqlD 252 (263)
+..-|+.|+|||+.| ++|||+|+|.|+++|+.+.++|||+|+||||||++++
T Consensus 125 ---------~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~ 177 (361)
T 3r2g_A 125 ---------AKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCS 177 (361)
T ss_dssp ---------SHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSSCHH
T ss_pred ---------cHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCcCcc
Confidence 001288999999998 7899999999999999999999999999999999876
No 13
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.90 E-value=3.5e-24 Score=196.60 Aligned_cols=179 Identities=11% Similarity=0.045 Sum_probs=123.9
Q ss_pred HHHHHHHHhccccceeccc--cccccccccccccCCcccccceeecccCCcccCCChhHHHHHHH-HHHCCCceeecCCC
Q 039466 35 YTLKENMEAFHGITFWPRI--LVDVCRIDISTSTLDYKISASIIIAPTGLHKLANPEGEVATARA-AASCNTIMVLSFTS 111 (263)
Q Consensus 35 ~t~~~N~~af~~~~l~pr~--L~~v~~~d~st~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~Ara-A~~~gi~~~lss~s 111 (263)
+-.-+|..+|++|+|+||+ +++++++||+|+|+|++++.||++|||++.. + ..+|++ ++..|+.+...
T Consensus 7 ~~~~~~~~~fd~v~l~p~~~~~~~~~~vdl~t~i~g~~l~~Pi~~a~mag~s----~--~~la~a~~~~gg~g~~~~--- 77 (336)
T 1ypf_A 7 HHHMGNVFDYEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVVPANMQTII----D--ERIATYLAENNYFYIMHR--- 77 (336)
T ss_dssp -----CCCCGGGEEECCCCCCCSSGGGCBCCEEETTEEESSSEEECSSTTTC----C--HHHHHHHHHTTCCCCCCC---
T ss_pred cccccccCCcceEEEecccCCCCCcccCcceEEECCEEecCcEEECCCCCCC----h--HHHHHHHHhCCCEEEecC---
Confidence 3456899999999999999 6799999999999999999999999998642 2 344554 44445444332
Q ss_pred CccHHHHHHhccccccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccH
Q 039466 112 SCSIEEVAASCNAAYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNL 191 (263)
Q Consensus 112 ~~sieeV~~~~~~~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~ 191 (263)
.+++.+.++++++++.|+ ++++| .|.++++++....+. ... ....-+. ...
T Consensus 78 ---------------~~~~~~~~~i~~~~~~g~---~v~v~---~g~~~~~~~~a~~~~---~~g-~~~~~i~-i~~--- 128 (336)
T 1ypf_A 78 ---------------FQPEKRISFIRDMQSRGL---IASIS---VGVKEDEYEFVQQLA---AEH-LTPEYIT-IDI--- 128 (336)
T ss_dssp ---------------SSGGGHHHHHHHHHHTTC---CCEEE---ECCSHHHHHHHHHHH---HTT-CCCSEEE-EEC---
T ss_pred ---------------CCCHHHHHHHHHHHhcCC---eEEEe---CCCCHHHHHHHHHHH---hcC-CCCCEEE-EEC---
Confidence 233345677888888775 55677 366666654311111 000 0000000 000
Q ss_pred HHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcCCCCCCCCCchh
Q 039466 192 EAYAKETMDPSLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSNHGARQLDYTPA 256 (263)
Q Consensus 192 ~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSNHGGRqlD~~~~ 256 (263)
...++...|+.|+|||+.|+.|+|+|| |.++|||++|.++|||+|+||||||||+|+.+.
T Consensus 129 -----~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~ 189 (336)
T 1ypf_A 129 -----AHGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIK 189 (336)
T ss_dssp -----SSCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHH
T ss_pred -----CCCCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCceeecccc
Confidence 012345679999999999999999999 999999999999999999999999999986654
No 14
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.88 E-value=6.2e-23 Score=189.39 Aligned_cols=173 Identities=13% Similarity=0.043 Sum_probs=125.2
Q ss_pred HHHHHHHhccccceeccccc-cc-cccccccccC-----CcccccceeecccCCcccCCChhHHHHHHHHHHCCCceeec
Q 039466 36 TLKENMEAFHGITFWPRILV-DV-CRIDISTSTL-----DYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLS 108 (263)
Q Consensus 36 t~~~N~~af~~~~l~pr~L~-~v-~~~d~st~~l-----G~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~ls 108 (263)
-+++|..+|++|.|+||.+. ++ +++||+|+|+ |.+++.||++|||++ .+|.++|++++++|...+++
T Consensus 14 ~~~~~~~~fddv~l~p~~~~~~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~------~~~~~lA~Ava~~Gglg~i~ 87 (351)
T 2c6q_A 14 LVPRGSLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDT------VGTFEMAKVLCKFSLFTAVH 87 (351)
T ss_dssp -----CCCGGGEEECCCCBCCCCGGGCBCCEEEECTTTCCEEEECCEEECSSTT------TSCHHHHHHHHHTTCEEECC
T ss_pred ccccCCCCcceEEEECCCCCCCccccceeEEEeccccCcCccccCCEEECCCCC------CCcHHHHHHHHHCCCEEEEc
Confidence 45789999999999999987 68 8999999999 999999999999984 45688999999999888887
Q ss_pred CCCCccHHHHHHhc---cc--------cccCHHHHHHHHHHHHHc--CCCEEEEccCCCCCcchHHHHhhhhhhhhhhhh
Q 039466 109 FTSSCSIEEVAASC---NA--------AYKKRDMAATLVQRAERN--GFMALVLTADTPRLDRREADIKNKMIAQQLKNL 175 (263)
Q Consensus 109 s~s~~sieeV~~~~---~~--------~~~d~~~~~~li~ra~~a--G~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~ 175 (263)
. ++++|++.+.. |. .-.+.+. .+.++...+. |++++.+++..
T Consensus 88 ~--~~s~e~~~~~i~~~p~~l~~v~~~~g~~~~~-~~~~~~l~~~~~g~~~i~i~~~~---------------------- 142 (351)
T 2c6q_A 88 K--HYSLVQWQEFAGQNPDCLEHLAASSGTGSSD-FEQLEQILEAIPQVKYICLDVAN---------------------- 142 (351)
T ss_dssp T--TCCHHHHHHHHHHCGGGCTTEEEEECSSHHH-HHHHHHHHHHCTTCCEEEEECSC----------------------
T ss_pred C--CCCHHHHHHHHhhCchhhheeEeecCCChHH-HHHHHHHHhccCCCCEEEEEecC----------------------
Confidence 5 56888876542 11 0011111 1222222222 55554443321
Q ss_pred hhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEcCCCC-----C
Q 039466 176 EGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVSNHGA-----R 249 (263)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VSNHGG-----R 249 (263)
.++...|+.|+|||+.| ++||++|+|++++||++|.++|||+|+|||||| |
T Consensus 143 -----------------------g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r 199 (351)
T 2c6q_A 143 -----------------------GYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTR 199 (351)
T ss_dssp -----------------------TTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTBCHH
T ss_pred -----------------------CCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCcc
Confidence 01122588999999999 899999999999999999999999999999997 7
Q ss_pred CCCC-chhhhcccc
Q 039466 250 QLDY-TPATISALE 262 (263)
Q Consensus 250 qlD~-~~~~i~~Lp 262 (263)
++++ .+++++.|+
T Consensus 200 ~~~g~~~p~~~~l~ 213 (351)
T 2c6q_A 200 KKTGVGYPQLSAVM 213 (351)
T ss_dssp HHHCBCCCHHHHHH
T ss_pred ccCCCCccHHHHHH
Confidence 7776 345565554
No 15
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.76 E-value=1.4e-18 Score=162.83 Aligned_cols=190 Identities=16% Similarity=0.213 Sum_probs=107.1
Q ss_pred Hhccccceeccccc-cccccccccccC-CcccccceeecccCCcccCCChhHHHHHHHHHHCCCceeecCCCCccHHHHH
Q 039466 42 EAFHGITFWPRILV-DVCRIDISTSTL-DYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLSFTSSCSIEEVA 119 (263)
Q Consensus 42 ~af~~~~l~pr~L~-~v~~~d~st~~l-G~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV~ 119 (263)
.+|++|.|+||++. +++++|++|+|+ |.+++.||++|||++ ++++|++.| ++++|...+++ +++++|++.
T Consensus 10 ~~fd~v~l~p~~~~~~~~~vdlst~l~~g~~l~~Pii~Apm~~----~~~~ela~a--~a~aGglg~i~--~~~s~e~~~ 81 (404)
T 1eep_A 10 LTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDT----VTESQMAIA--IAKEGGIGIIH--KNMSIEAQR 81 (404)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTT----TCSHHHHHH--HHHHTSEEEEC--SSSCHHHHH
T ss_pred CCcccEEEccCCCCcCccccccceeccCCcccCCCEEeCCCCC----CCCHHHHHH--HHHCCCEEEEC--CCCCHHHHH
Confidence 47999999999998 899999999999 999999999999997 567777766 55555555555 467899887
Q ss_pred Hhccc--ccc-------CHHH--H-HHHHHHHHH----cCCCEEEEccCCCCCcchHHHHhhhhh--h---h-hhhhhhh
Q 039466 120 ASCNA--AYK-------KRDM--A-ATLVQRAER----NGFMALVLTADTPRLDRREADIKNKMI--A---Q-QLKNLEG 177 (263)
Q Consensus 120 ~~~~~--~~~-------d~~~--~-~~li~ra~~----aG~~al~vTvD~~~~g~R~~d~r~~~~--~---p-~~~~~~~ 177 (263)
+..+. .+. +++. . ..++-.... .+++.+..+.+.|.. .|+.+-+..+. + + ....+..
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~i~~~~~~~~~a~~ 160 (404)
T 1eep_A 82 KEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPNA-CKDLNNKLRVGAAVSIDIDTIERVEE 160 (404)
T ss_dssp HHHHHHHTCC--------------------------------------CCTTC-CBCTTSCBCCEEEECSCTTHHHHHHH
T ss_pred HHHHHHHhhccCCCceeccccccccccccccCCCCCHHHHHHHHHHhhhcchh-hhhcccCceEEEEeCCChhHHHHHHH
Confidence 65432 111 0110 0 011100000 022333333444431 12111000000 0 0 0000000
Q ss_pred ccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEcCC
Q 039466 178 LLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VSNH 246 (263)
......+-...+ ....++...|+.|+|+|+.+ ++||+++++.++++|+++.++|+|+|+|+.+
T Consensus 161 ~~~~G~d~i~i~------~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~ 224 (404)
T 1eep_A 161 LVKAHVDILVID------SAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIG 224 (404)
T ss_dssp HHHTTCSEEEEC------CSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSS
T ss_pred HHHCCCCEEEEe------CCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEECCC
Confidence 000000000000 00123445689999999999 8999999999999999999999999999433
No 16
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.33 E-value=1.2e-11 Score=114.18 Aligned_cols=148 Identities=16% Similarity=0.178 Sum_probs=103.5
Q ss_pred hccccceeccccccc--cccccccccC-CcccccceeecccCCcccCCChhHHHHHHH-HHHCCCceeecCCCCccHHHH
Q 039466 43 AFHGITFWPRILVDV--CRIDISTSTL-DYKISASIIIAPTGLHKLANPEGEVATARA-AASCNTIMVLSFTSSCSIEEV 118 (263)
Q Consensus 43 af~~~~l~pr~L~~v--~~~d~st~~l-G~~~~~Pi~iaP~~~~~l~~~~ge~a~Ara-A~~~gi~~~lss~s~~sieeV 118 (263)
.|+++.|+|+ ++++ +++|++|+|. +..+..||+.+||... .+..+|.+ |.+-|+.++-. ..+.++.
T Consensus 14 ~fddv~l~p~-~~~~~~~~vdl~t~l~~~~~l~~Pii~apM~~v------t~~~lA~avA~~GGlgii~~---~~s~e~~ 83 (361)
T 3khj_A 14 TFEDILLVPN-YSEVLPREVSLETKLTKNVSLKIPLISSAMDTV------TEHLMAVGMARLGGIGIIHK---NMDMESQ 83 (361)
T ss_dssp CGGGEEECCC-CBCCCGGGCCCCEESSSSCEESSSEEECSSTTT------CSHHHHHHHHHTTCEEEECS---SSCHHHH
T ss_pred CcceEEEECC-CCCCCHHHccCceecccccccCCCEEeecCCCC------CcHHHHHHHHHcCCCeEEec---CCCHHHH
Confidence 5999999998 6765 6899999998 7899999999999853 23466665 44556555543 3455543
Q ss_pred H----Hhc--cc------cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCC
Q 039466 119 A----ASC--NA------AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSD 186 (263)
Q Consensus 119 ~----~~~--~~------~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~ 186 (263)
. +.. +. +..+. .+.++.+.++|++.|+ +|+.. |
T Consensus 84 ~~~I~~vk~~~~~pvga~ig~~~---~e~a~~l~eaGad~I~--ld~a~-G----------------------------- 128 (361)
T 3khj_A 84 VNEVLKVKNSGGLRVGAAIGVNE---IERAKLLVEAGVDVIV--LDSAH-G----------------------------- 128 (361)
T ss_dssp HHHHHHHHHTTCCCCEEEECTTC---HHHHHHHHHTTCSEEE--ECCSC-C-----------------------------
T ss_pred HHHHHHHHhccCceEEEEeCCCH---HHHHHHHHHcCcCeEE--EeCCC-C-----------------------------
Confidence 2 211 11 21121 4556777778877655 44322 1
Q ss_pred CCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEEcCCCC
Q 039466 187 TGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIVSNHGA 248 (263)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~VSNHGG 248 (263)
++..-.+.++++++.+++|||++.|.++++|+.+.++|+|+|+|+.++|
T Consensus 129 -------------~~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~G 177 (361)
T 3khj_A 129 -------------HSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPG 177 (361)
T ss_dssp -------------SBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCC
T ss_pred -------------CcHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCC
Confidence 0111125689999999999999999999999999999999999987666
No 17
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.30 E-value=9.8e-12 Score=128.57 Aligned_cols=161 Identities=22% Similarity=0.196 Sum_probs=114.8
Q ss_pred ceeccccccccccccccccCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCceee-cCCCC--------------
Q 039466 48 TFWPRILVDVCRIDISTSTLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVL-SFTSS-------------- 112 (263)
Q Consensus 48 ~l~pr~L~~v~~~d~st~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~l-ss~s~-------------- 112 (263)
.-.|.....++++|++++++|.++..||++||+++. .+.++++++.+.|..+++ +|.+.
T Consensus 519 ~~~p~~~~ev~~v~ls~~~~G~~~~nPv~lAa~~~~------~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~ 592 (1025)
T 1gte_A 519 PELPLFYTPVDLVDISVEMAGLKFINPFGLASAAPT------TSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVR 592 (1025)
T ss_dssp CCBCCCCCGGGGCCCCEEETTEEESSSEEECSSGGG------SSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEE
T ss_pred cCccccccccccccceeeeccccccCcccccCCCCC------CCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEe
Confidence 344555557789999999999999999999998763 334556777777888876 21110
Q ss_pred -----------------------cc-------HHHHHHhccc------c--ccCHHHHHHHHHHHHHcCCCEEEEccCCC
Q 039466 113 -----------------------CS-------IEEVAASCNA------A--YKKRDMAATLVQRAERNGFMALVLTADTP 154 (263)
Q Consensus 113 -----------------------~s-------ieeV~~~~~~------~--~~d~~~~~~li~ra~~aG~~al~vTvD~~ 154 (263)
.. ++++++..++ + -.|.+...+.+++++++|+++|.+++.+|
T Consensus 593 ~~~~g~~~~~~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P 672 (1025)
T 1gte_A 593 GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCP 672 (1025)
T ss_dssp CCTTCSCCSSCCSCEEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCB
T ss_pred ccccccccCCchhheeeeccccchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCC
Confidence 01 2445554443 2 35788889999999999999999999988
Q ss_pred CCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEecCCHH----HH
Q 039466 155 RLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGVLTRE----DA 230 (263)
Q Consensus 155 ~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI~s~e----DA 230 (263)
.. .+.++. |.. -..++.+.|+.++|+|+.+++||++|...+.+ -|
T Consensus 673 ~~-~~~~~~--G~~----------------------------~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a 721 (1025)
T 1gte_A 673 HG-MGERGM--GLA----------------------------CGQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIA 721 (1025)
T ss_dssp CC-CC-------SB----------------------------GGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHH
T ss_pred CC-CCCCCc--ccc----------------------------cccCHHHHHHHHHHHHHhhCCceEEEeCCChHHHHHHH
Confidence 63 221111 000 01134456788999999999999999876443 48
Q ss_pred HHHHHcCCCEEEEcC
Q 039466 231 IKAVEVGVAGIIVSN 245 (263)
Q Consensus 231 ~~a~~~G~dgI~VSN 245 (263)
+.+.++|+|+|+|||
T Consensus 722 ~~~~~~G~d~i~v~N 736 (1025)
T 1gte_A 722 RAAKEGGADGVTATN 736 (1025)
T ss_dssp HHHHHHTCSEEEECC
T ss_pred HHHHHcCCCEEEEec
Confidence 888999999999998
No 18
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.16 E-value=6.7e-11 Score=109.42 Aligned_cols=146 Identities=21% Similarity=0.186 Sum_probs=98.3
Q ss_pred hccccceeccccccc--cccccccccC-CcccccceeecccCCcccCCChhHHHHHHHHHHCCCceeecCCCCccHHHHH
Q 039466 43 AFHGITFWPRILVDV--CRIDISTSTL-DYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLSFTSSCSIEEVA 119 (263)
Q Consensus 43 af~~~~l~pr~L~~v--~~~d~st~~l-G~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV~ 119 (263)
.|+++.|+|. +.++ +++|++|+|. +..+..||+.+||+.. .+..+|.+.++.|-.-++.. +.+.|+..
T Consensus 15 ~fddv~lvp~-~~~~~~~~vdl~t~lt~~~~l~~Pii~apM~~v------s~~~lA~avA~aGGlg~i~~--~~s~e~~~ 85 (366)
T 4fo4_A 15 TFDDVLLVPA-HSTVLPNTADLRTRLTKNIALNIPMVSASMDTV------TEARLAIALAQEGGIGFIHK--NMSIEQQA 85 (366)
T ss_dssp CGGGEEECCC-CCCCCGGGCBCCEEEETTEEESSSEEECCCTTT------CSHHHHHHHHHTTCEEEECS--SSCHHHHH
T ss_pred CcceEEEECC-CCCCChhhcccceecccccccCCCEEeCCCCCC------ChHHHHHHHHHcCCceEeec--CCCHHHHH
Confidence 5999999998 5544 5899999997 6889999999999852 23467766555544344432 34555532
Q ss_pred Hh-------cc-c----cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCC
Q 039466 120 AS-------CN-A----AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDT 187 (263)
Q Consensus 120 ~~-------~~-~----~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~ 187 (263)
+. .+ . +..+. ...+.++.+.++|++.++|+. .. |
T Consensus 86 ~~i~~vk~~~~l~vga~vg~~~-~~~~~~~~lieaGvd~I~idt--a~-G------------------------------ 131 (366)
T 4fo4_A 86 AQVHQVKISGGLRVGAAVGAAP-GNEERVKALVEAGVDVLLIDS--SH-G------------------------------ 131 (366)
T ss_dssp HHHHHHHTTTSCCCEEECCSCT-TCHHHHHHHHHTTCSEEEEEC--SC-T------------------------------
T ss_pred HHHHHHHhcCceeEEEEeccCh-hHHHHHHHHHhCCCCEEEEeC--CC-C------------------------------
Confidence 21 11 0 11111 234556667778887766542 21 0
Q ss_pred CccHHHHHHHhcCCCCCH-HHHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEc
Q 039466 188 GSNLEAYAKETMDPSLSW-KDIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 188 ~~~~~~~~~~~~~~~~~W-~dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VS 244 (263)
++ -.| +.|+++++.+ ++|||+..|.++++|+.+.++|+|+|+|+
T Consensus 132 ------------~~-~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 132 ------------HS-EGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp ------------TS-HHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred ------------CC-HHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEe
Confidence 00 123 4589999998 78999988999999999999999999994
No 19
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.08 E-value=8.6e-10 Score=100.44 Aligned_cols=172 Identities=14% Similarity=0.128 Sum_probs=96.9
Q ss_pred ccccccccCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCceee-cCCCCccHHHHHH-hccc---ccc------
Q 039466 59 RIDISTSTLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVL-SFTSSCSIEEVAA-SCNA---AYK------ 127 (263)
Q Consensus 59 ~~d~st~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~l-ss~s~~sieeV~~-~~~~---~~~------ 127 (263)
.+|++++++|.++..||++|+ |+ ++++| .++++++.|+.+++ ++.+. +.... ..|. .+.
T Consensus 42 ~~~l~~~i~g~~l~npi~~aa-g~----~~~~~--~~~~~a~~G~g~i~~~~~~~---~~~~g~~~pr~~~~~~d~~~in 111 (336)
T 1f76_A 42 VPAKPVNCMGLTFKNPLGLAA-GL----DKDGE--CIDALGAMGFGSIEIGTVTP---RPQPGNDKPRLFRLVDAEGLIN 111 (336)
T ss_dssp CCCCCEEETTEEESSSEEECT-TS----STTCC--CHHHHHHTTCSEEEEEEECS---SCBCCSCSCCEEEETTTTEEEE
T ss_pred CCCCCeEECCEEcCCCcEeCc-cc----CCcHH--HHHHHHHcCccEEEeCCCCC---CCCCCCCCcceeeccccceeee
Confidence 489999999999999999995 32 45555 77888899999754 33332 21110 0011 111
Q ss_pred -----CHHHHHHHHHHHHHcCCC-EEEEccC----CCCCcchHHHHhhhhhhhhhhhhh--hccccCCCCCCCccHHHHH
Q 039466 128 -----KRDMAATLVQRAERNGFM-ALVLTAD----TPRLDRREADIKNKMIAQQLKNLE--GLLSTKVTSDTGSNLEAYA 195 (263)
Q Consensus 128 -----d~~~~~~li~ra~~aG~~-al~vTvD----~~~~g~R~~d~r~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~ 195 (263)
+++ ..++++++++++++ .+++++- ++. .....+....+.... ..+. .+++. .+. .++ .+.
T Consensus 112 ~~g~~~~g-~~~~~~~~~~~~~~~~~~v~i~~~~~~~i-~~~~~~~~~aa~~~~-~g~d~iein~~--sP~-~~g-~~~- 183 (336)
T 1f76_A 112 RMGFNNLG-VDNLVENVKKAHYDGVLGINIGKNKDTPV-EQGKDDYLICMEKIY-AYAGYIAINIS--SPN-TPG-LRT- 183 (336)
T ss_dssp CCCCCBCC-HHHHHHHHHHCCCCSEEEEEECCCTTSCG-GGTHHHHHHHHHHHG-GGCSEEEEECC--CSS-STT-GGG-
T ss_pred cCCCCCcC-HHHHHHHHHhcccCCcEEEEecCCCCCcc-cccHHHHHHHHHHHh-ccCCEEEEEcc--CCC-CCC-ccc-
Confidence 111 24555666665554 4666652 211 011333332221100 0000 01110 000 000 011
Q ss_pred HHhcCCCCCHHHHHHHHhhc---------CCCEEEEec--CCHHH----HHHHHHcCCCEEEEcCCC-CCC
Q 039466 196 KETMDPSLSWKDIEWLRSIT---------NLPILIKGV--LTRED----AIKAVEVGVAGIIVSNHG-ARQ 250 (263)
Q Consensus 196 ~~~~~~~~~W~dl~~lr~~~---------~lPiilKGI--~s~eD----A~~a~~~G~dgI~VSNHG-GRq 250 (263)
..++.+.|+.++++|+.+ ++||++|=- ++.+| |+.+.++|+|+|+||||+ +|+
T Consensus 184 --~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~ 252 (336)
T 1f76_A 184 --LQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRS 252 (336)
T ss_dssp --GGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCT
T ss_pred --ccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCccccc
Confidence 123456789999999998 899999942 34445 788899999999999996 554
No 20
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.07 E-value=7.2e-11 Score=123.83 Aligned_cols=186 Identities=12% Similarity=0.021 Sum_probs=110.2
Q ss_pred hccccceecccccc--ccccccccccCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCceeecCCCCccHHHHH-
Q 039466 43 AFHGITFWPRILVD--VCRIDISTSTLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLSFTSSCSIEEVA- 119 (263)
Q Consensus 43 af~~~~l~pr~L~~--v~~~d~st~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV~- 119 (263)
.|+.+.+.+..++. ++++|+++ ++..||+++||++..+ .++...++|+||.++|+.+.++..+. +.++..
T Consensus 824 ~~~dl~~~~~~l~~i~~~ev~~~~-----~I~~Pf~isaMS~Gal-S~ea~~aLA~Aa~~aGg~~~tGeGg~-~pe~~~~ 896 (1479)
T 1ea0_A 824 QLRDLLELRSTKAPVPVDEVESIT-----AIRKRFITPGMSMGAL-SPEAHGTLNVAMNRIGAKSDSGEGGE-DPARFRP 896 (1479)
T ss_dssp SGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEEEEECCBTTB-CHHHHHHHHHHHHHTTCEEECCTTCC-CGGGSSB
T ss_pred chhhhhhccCCCCCCCcccccccc-----cccCCeEecCcccccc-CHHHHHHHHHHHHHcCCeeEcCCCcc-CHHHhhh
Confidence 46677777666664 35677666 6799999999997655 46788899999999999998887643 333221
Q ss_pred ------------Hhccc-cccCHHHHHHHHHHHHHcCCCEEEEccCCCC----Cc----chHHHHhhhhhhhhhhhhhhc
Q 039466 120 ------------ASCNA-AYKKRDMAATLVQRAERNGFMALVLTADTPR----LD----RREADIKNKMIAQQLKNLEGL 178 (263)
Q Consensus 120 ------------~~~~~-~~~d~~~~~~li~ra~~aG~~al~vTvD~~~----~g----~R~~d~r~~~~~p~~~~~~~~ 178 (263)
+.+++ +--+... + ..++++-+.+-... .| .+-.... ...+.+
T Consensus 897 ~~~g~~~~~~IrQ~asg~FGVn~~~----l-----~~a~~ieIKigQGAKpG~GG~Lp~~kv~~~I-----A~~R~~--- 959 (1479)
T 1ea0_A 897 DKNGDNWNSAIKQVASGRFGVTAEY----L-----NQCRELEIKVAQGAKPGEGGQLPGFKVTEMI-----ARLRHS--- 959 (1479)
T ss_dssp CTTSCBCCCSEEEECSSCTTCCHHH----H-----TSCSEEEEECCCTTSTTTCCEECGGGCCHHH-----HHHHTC---
T ss_pred ccccchhhhhhhhhcCCCCCcChHH----c-----cccchHHHHHhccCCCCcCCCCCHHHHHHHH-----HHHcCC---
Confidence 11111 1112121 1 34556665552110 00 0000000 000000
Q ss_pred cccCCCCCCCccHHHHHHHhcCCCC-CHH----HHHHHHhhc-CCCEEEEecC---CHHHHHHHHHcCCCEEEEcCCCCC
Q 039466 179 LSTKVTSDTGSNLEAYAKETMDPSL-SWK----DIEWLRSIT-NLPILIKGVL---TREDAIKAVEVGVAGIIVSNHGAR 249 (263)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~-~W~----dl~~lr~~~-~lPiilKGI~---s~eDA~~a~~~G~dgI~VSNHGGR 249 (263)
.... ..+++..+.++ +|+ .|++||+.+ +.||++|++. ..++|+.+.++|||+|+||||+|+
T Consensus 960 -----~~Gv-----~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGG 1029 (1479)
T 1ea0_A 960 -----TPGV-----MLISPPPHHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGG 1029 (1479)
T ss_dssp -----CTTC-----CEECCSSCTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCC
T ss_pred -----CCCC-----CccCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCC
Confidence 0000 00111122333 565 388999999 8899999986 488999999999999999999665
Q ss_pred C--------CCCchhhhcccc
Q 039466 250 Q--------LDYTPATISALE 262 (263)
Q Consensus 250 q--------lD~~~~~i~~Lp 262 (263)
. .+...+++..||
T Consensus 1030 Tgasp~~~~~~~G~Pt~~aL~ 1050 (1479)
T 1ea0_A 1030 TGASPQTSIKFAGLPWEMGLS 1050 (1479)
T ss_dssp CSSEETTHHHHSCCCHHHHHH
T ss_pred CCCCchhhhcCCchhHHHHHH
Confidence 3 344455555554
No 21
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=98.99 E-value=1.7e-09 Score=100.98 Aligned_cols=70 Identities=14% Similarity=0.124 Sum_probs=51.2
Q ss_pred hccccceeccccc-cccccccccccC-CcccccceeecccCCcccCCChhHHHHHHHHHHCCCceeecCCCCccHHHHHH
Q 039466 43 AFHGITFWPRILV-DVCRIDISTSTL-DYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLSFTSSCSIEEVAA 120 (263)
Q Consensus 43 af~~~~l~pr~L~-~v~~~d~st~~l-G~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~ 120 (263)
.|+++.|+|..-. ..+++|++|.|- ...+..||+-|||+.. .+-.+|.+.+++|-.-+|+. ..++|++++
T Consensus 11 t~ddvll~P~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~M~~V------s~~~lA~Ava~aGGlGvi~~--~~~~e~~~~ 82 (400)
T 3ffs_A 11 TFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTV------TEHLMAVGMARLGGIGIIHK--NMDMESQVN 82 (400)
T ss_dssp CGGGEEECCCCBCSCGGGCCCCEESSSSCEESSSEEECSCTTT------CSSHHHHHHHTTTCEEEECS--SSCHHHHHH
T ss_pred CceeEEEecCCCccCHHHccCccchhcccCCCCCEEeCCCCCc------CcHHHHHHHHHCCCEEEeCC--CCCHHHHHH
Confidence 4899999997543 336899999986 4678999999999842 23357777778887677764 567776643
No 22
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=98.95 E-value=1.4e-09 Score=97.99 Aligned_cols=149 Identities=14% Similarity=0.072 Sum_probs=99.8
Q ss_pred cccccccCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCceeec-CCCC--------------------------
Q 039466 60 IDISTSTLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLS-FTSS-------------------------- 112 (263)
Q Consensus 60 ~d~st~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~ls-s~s~-------------------------- 112 (263)
+|++|+++|.++..||++||..+ +.++|. .+.+.+.|+.+++. +.+.
T Consensus 2 ~dl~~~i~g~~l~nPi~~Aag~~----~~~~~~--~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 75 (314)
T 2e6f_A 2 MCLKLNLLDHVFANPFMNAAGVL----CSTEED--LRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPN 75 (314)
T ss_dssp CCCCEEETTEEESSSEEECTTSS----CSSHHH--HHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred CCcceEECCEecCCCcEECCCCC----CCCHHH--HHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 58999999999999999997442 234444 46688899888542 3221
Q ss_pred ccHH----HHHHh-c-cc------cc-cCHHHHHHHHHHHHHcCCC---EEEEccCCCCCcchHHHHhhhhhhhhhhhhh
Q 039466 113 CSIE----EVAAS-C-NA------AY-KKRDMAATLVQRAERNGFM---ALVLTADTPRLDRREADIKNKMIAQQLKNLE 176 (263)
Q Consensus 113 ~sie----eV~~~-~-~~------~~-~d~~~~~~li~ra~~aG~~---al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~ 176 (263)
...+ ++... . ++ +. .+.+...+.+++++++|++ ++.+++-+|.. .+.+++
T Consensus 76 ~g~~~~~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~-~g~~~~------------- 141 (314)
T 2e6f_A 76 LGFDFYLKYASDLHDYSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV-PGKPQV------------- 141 (314)
T ss_dssp SCHHHHHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS-TTCCCG-------------
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC-CCchhh-------------
Confidence 1122 23322 1 12 22 3556677778888888888 78888777653 111000
Q ss_pred hccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEec--CCHHH----HHHHHHcC-CCEEEEcCCCCC
Q 039466 177 GLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGV--LTRED----AIKAVEVG-VAGIIVSNHGAR 249 (263)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI--~s~eD----A~~a~~~G-~dgI~VSNHGGR 249 (263)
..++...++.++++|+.+++||++|-- .+.++ |+.+.++| +|+|+|+|+.|+
T Consensus 142 ---------------------g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~ 200 (314)
T 2e6f_A 142 ---------------------AYDFEAMRTYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGN 200 (314)
T ss_dssp ---------------------GGSHHHHHHHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEE
T ss_pred ---------------------cCCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCc
Confidence 001112367899999999999999963 57778 78888999 999999999864
No 23
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=98.84 E-value=6.1e-09 Score=94.32 Aligned_cols=152 Identities=16% Similarity=0.041 Sum_probs=102.4
Q ss_pred ccccceeecccCCcccCCChhHHHHHHHHHHCCCceeecCCCCc---------cHHHHHHhccc-------cccCHHHHH
Q 039466 70 KISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLSFTSSC---------SIEEVAASCNA-------AYKKRDMAA 133 (263)
Q Consensus 70 ~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~---------sieeV~~~~~~-------~~~d~~~~~ 133 (263)
++..||++|||+.. . +....+.+++.|..++++-..+. .++.+ ....+ +-.+++...
T Consensus 2 ~l~nri~~APM~~~--t----~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~~~~~~~ 74 (318)
T 1vhn_A 2 SLEVKVGLAPMAGY--T----DSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGSEPNELS 74 (318)
T ss_dssp ---CEEEECCCTTT--C----SHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECSCHHHHH
T ss_pred ccCCCEEECCCCCC--C----cHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCCCCHHHHH
Confidence 46789999999842 2 25677778888877776554321 11222 11112 235788888
Q ss_pred HHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHh
Q 039466 134 TLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRS 213 (263)
Q Consensus 134 ~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~ 213 (263)
+..++++++ |++|-|+..+|....|. .++.- +-+.++.+.|+.++++++
T Consensus 75 ~aa~~a~~~-~d~Iein~gcP~~~~r~----~~~G~--------------------------~l~~~~~~~~eiv~~v~~ 123 (318)
T 1vhn_A 75 EAARILSEK-YKWIDLNAGCPVRKVVK----EGAGG--------------------------ALLKDLRHFRYIVRELRK 123 (318)
T ss_dssp HHHHHHTTT-CSEEEEEECCCCHHHHH----TTCGG--------------------------GGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-CCEEEEECCCCcHhcCC----CCccc--------------------------chhhCHHHHHHHHHHHHH
Confidence 999999999 99999999998742221 11100 001235567899999999
Q ss_pred hcCCCEEEE---ecCC---HHHHHHHHHcCCCEEEEcCCCCCCCCC--chhhhccc
Q 039466 214 ITNLPILIK---GVLT---REDAIKAVEVGVAGIIVSNHGARQLDY--TPATISAL 261 (263)
Q Consensus 214 ~~~lPiilK---GI~s---~eDA~~a~~~G~dgI~VSNHGGRqlD~--~~~~i~~L 261 (263)
.++.||.+| |+.. .+.|+.+.+.|+|+|.| |||++.++ .++.++.+
T Consensus 124 ~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v--~g~~~~~~~~~~~~~~~i 177 (318)
T 1vhn_A 124 SVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFI--HTRTVVQSFTGRAEWKAL 177 (318)
T ss_dssp HCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEE--ESSCTTTTTSSCCCGGGG
T ss_pred hhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEE--cCCCccccCCCCcCHHHH
Confidence 999999999 8754 37899999999999999 78888774 34444443
No 24
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=98.83 E-value=2.5e-09 Score=112.52 Aligned_cols=64 Identities=11% Similarity=-0.016 Sum_probs=47.9
Q ss_pred hccccceecccccc--ccccccccccCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCceeecCCCC
Q 039466 43 AFHGITFWPRILVD--VCRIDISTSTLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLSFTSS 112 (263)
Q Consensus 43 af~~~~l~pr~L~~--v~~~d~st~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~ 112 (263)
.|+.+.+.+..++. ++++|+++ ++..||+++||++..+. ++...++|+||.++|+.+.++....
T Consensus 841 ~~r~l~~~~~~~~~i~~~ev~~~~-----~I~~Pfii~aMS~GslS-~ea~~aLA~Aas~aGg~~~tGeGg~ 906 (1520)
T 1ofd_A 841 ALRDLLDFNADQPAISLEEVESVE-----SIVKRFCTGGMSLGALS-REAHETLAIAMNRLGAKSNSGEGGE 906 (1520)
T ss_dssp SGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEECCCBCTTTSC-HHHHHHHHHHHHHHTCBCEECTTCC
T ss_pred chhhhccccCCCCCCCchhhcccc-----cccCceEecCcCccccc-HHHHHHHHHHHHHcCCceEeCCCCC
Confidence 45666666555553 34566555 67999999999976654 5778899999999999999987653
No 25
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.74 E-value=1.8e-08 Score=90.21 Aligned_cols=149 Identities=13% Similarity=0.158 Sum_probs=92.8
Q ss_pred ccccccccccCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCceee-------------------------cCCC
Q 039466 57 VCRIDISTSTLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVL-------------------------SFTS 111 (263)
Q Consensus 57 v~~~d~st~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~l-------------------------ss~s 111 (263)
++++|++++|+|.++..||++|| |+.+... +. .+.+++.|..+++ ++..
T Consensus 2 ~~~~~l~~~~~g~~l~npi~~aa-g~~~~~~---~~--~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g 75 (311)
T 1ep3_A 2 TENNRLSVKLPGLDLKNPIIPAS-GCFGFGE---EY--AKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIG 75 (311)
T ss_dssp CCCTTTCEEETTEEESSSEEECT-TSSTTST---TG--GGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCC
T ss_pred CCCCccceEECCEECCCCcEECC-CCCCCCH---HH--HHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccC
Confidence 36789999999999999999999 2222211 11 2333223333332 2221
Q ss_pred --CccHHH--------HHHhccc------cc-cCHHHHHHHHHHHHH-cCCCEEEEccCCCCCcchHHHHhhhhhhhhhh
Q 039466 112 --SCSIEE--------VAASCNA------AY-KKRDMAATLVQRAER-NGFMALVLTADTPRLDRREADIKNKMIAQQLK 173 (263)
Q Consensus 112 --~~siee--------V~~~~~~------~~-~d~~~~~~li~ra~~-aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~ 173 (263)
..+.++ +.+..++ +. .+.+...+.++++++ +|+++|-+++.+|..-.| +..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g------~~~~---- 145 (311)
T 1ep3_A 76 LQNPGLEVIMTEKLPWLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHG------GQAF---- 145 (311)
T ss_dssp CCBCCHHHHHHTHHHHHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGT------TEEG----
T ss_pred CCCcCHHHHHHHHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCc------hhhh----
Confidence 123333 2221222 22 356777788888887 999999998877652100 0000
Q ss_pred hhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEE---ecCCHHH-HHHHHHcCCCEEEEcC
Q 039466 174 NLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIK---GVLTRED-AIKAVEVGVAGIIVSN 245 (263)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilK---GI~s~eD-A~~a~~~G~dgI~VSN 245 (263)
..++.+.++.++++++.++.||++| ++.+..+ |+.+.++|+|+|+|+|
T Consensus 146 ------------------------g~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~ 197 (311)
T 1ep3_A 146 ------------------------GTDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMIN 197 (311)
T ss_dssp ------------------------GGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECC
T ss_pred ------------------------cCCHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeC
Confidence 0112233577999999999999999 4445445 8889999999999999
No 26
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=98.72 E-value=6.6e-08 Score=86.87 Aligned_cols=150 Identities=11% Similarity=0.031 Sum_probs=99.1
Q ss_pred cccccCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCceeec-CCCCcc--------------------------
Q 039466 62 ISTSTLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLS-FTSSCS-------------------------- 114 (263)
Q Consensus 62 ~st~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~ls-s~s~~s-------------------------- 114 (263)
++++++|.++..||++||..+ +.++| ..+.+.+.|..+++. +.+..+
T Consensus 2 l~~~i~g~~l~npv~~Aag~~----~~~~~--~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g 75 (311)
T 1jub_A 2 LNTTFANAKFANPFMNASGVH----CMTIE--DLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLG 75 (311)
T ss_dssp CCEEETTEEESSSEEECTTSS----CSSHH--HHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSC
T ss_pred CceEECCEEcCCCcEECCCCC----CCCHH--HHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcc
Confidence 678999999999999997322 23444 446778888777652 211111
Q ss_pred HH----HHHHh---c-cc------cc-cCHHHHHHHHHHHHHcCCC-EEEEccCCCCCcchHHHHhhhhhhhhhhhhhhc
Q 039466 115 IE----EVAAS---C-NA------AY-KKRDMAATLVQRAERNGFM-ALVLTADTPRLDRREADIKNKMIAQQLKNLEGL 178 (263)
Q Consensus 115 ie----eV~~~---~-~~------~~-~d~~~~~~li~ra~~aG~~-al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~ 178 (263)
++ ++... . ++ +. .+.+...+.+++++++|++ ++.+++.+|.. .+.+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~-~g~~~~--------------- 139 (311)
T 1jub_A 76 FDYYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNV-PGEPQL--------------- 139 (311)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS-SSCCCG---------------
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC-CCcccc---------------
Confidence 22 33221 1 12 22 4667788888888899999 89998887764 111000
Q ss_pred cccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEec--CCHHH----HHHHHHcCCCEEEEcCCC--CCC
Q 039466 179 LSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGV--LTRED----AIKAVEVGVAGIIVSNHG--ARQ 250 (263)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI--~s~eD----A~~a~~~G~dgI~VSNHG--GRq 250 (263)
..++...++.++++|+.+++||++|-- .+.++ |+.+.++|+|+|+|+|+. |++
T Consensus 140 -------------------g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~ 200 (311)
T 1jub_A 140 -------------------AYDFEATEKLLKEVFTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLF 200 (311)
T ss_dssp -------------------GGCHHHHHHHHHHHTTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEEC
T ss_pred -------------------cCCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCce
Confidence 001112367899999999999999964 35555 677778999999999996 445
Q ss_pred CC
Q 039466 251 LD 252 (263)
Q Consensus 251 lD 252 (263)
+|
T Consensus 201 i~ 202 (311)
T 1jub_A 201 ID 202 (311)
T ss_dssp EE
T ss_pred ec
Confidence 55
No 27
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.64 E-value=4.1e-08 Score=86.01 Aligned_cols=100 Identities=19% Similarity=0.253 Sum_probs=78.1
Q ss_pred cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCC
Q 039466 125 AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLS 204 (263)
Q Consensus 125 ~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (263)
.+.|...+.+..++.++.||+.+.+++|.++.++|-.++...+-+| .. .+.+ . ..+-.+
T Consensus 117 llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmP--------lg---~pIG---------s-G~Gi~~ 175 (265)
T 1wv2_A 117 LFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMP--------LA---GLIG---------S-GLGICN 175 (265)
T ss_dssp CCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEE--------CS---SSTT---------C-CCCCSC
T ss_pred cCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEe--------CC---ccCC---------C-CCCcCC
Confidence 5678888888888888889999999999999888887775433222 00 0000 0 112348
Q ss_pred HHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
|+.|++|++..++|||+.| |.+++||.+|.++|||||+|..
T Consensus 176 ~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgS 217 (265)
T 1wv2_A 176 PYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNT 217 (265)
T ss_dssp HHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEESH
T ss_pred HHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 9999999999999999996 9999999999999999999875
No 28
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.53 E-value=7.2e-08 Score=92.11 Aligned_cols=58 Identities=17% Similarity=0.259 Sum_probs=48.8
Q ss_pred CHHHHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEcCCCC-----CCCCCc-hhhhccc
Q 039466 204 SWKDIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVSNHGA-----RQLDYT-PATISAL 261 (263)
Q Consensus 204 ~W~dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VSNHGG-----RqlD~~-~~~i~~L 261 (263)
.|+.|+|+|+.+ ++||+++++.++++|+.+.++|+|+|+|||||| |++++. .++++.|
T Consensus 265 ~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l 329 (494)
T 1vrd_A 265 VIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAV 329 (494)
T ss_dssp HHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHH
T ss_pred HHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHH
Confidence 678999999999 799999999999999999999999999999998 455543 3344443
No 29
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=98.39 E-value=1.9e-06 Score=77.95 Aligned_cols=39 Identities=21% Similarity=0.299 Sum_probs=33.9
Q ss_pred HHHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
|+.++++++. ++|++.+ |.++++|+++.+.|+|+|+|++
T Consensus 108 ~~~~~~l~~~-gi~vi~~-v~t~~~a~~~~~~GaD~i~v~g 146 (328)
T 2gjl_A 108 GEHIAEFRRH-GVKVIHK-CTAVRHALKAERLGVDAVSIDG 146 (328)
T ss_dssp HHHHHHHHHT-TCEEEEE-ESSHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHc-CCCEEee-CCCHHHHHHHHHcCCCEEEEEC
Confidence 5677888876 8888855 9999999999999999999976
No 30
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=98.36 E-value=1.3e-06 Score=79.46 Aligned_cols=124 Identities=16% Similarity=0.160 Sum_probs=79.4
Q ss_pred cccCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCceeecCCCCccHHHH-------HHhc--c-c--ccc-CHH
Q 039466 64 TSTLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLSFTSSCSIEEV-------AASC--N-A--AYK-KRD 130 (263)
Q Consensus 64 t~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV-------~~~~--~-~--~~~-d~~ 130 (263)
+++|| +..||+.+||++ +. ...++.++.++|..-++.+.. .+.+++ ++.. | + ++. ++.
T Consensus 6 ~~~l~--~~~Pii~apM~g--~s----~~~la~av~~aG~lG~i~~~~-~~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~ 76 (332)
T 2z6i_A 6 TELLK--IDYPIFQGGMAW--VA----DGDLAGAVSKAGGLGIIGGGN-APKEVVKANIDKIKSLTDKPFGVNIMLLSPF 76 (332)
T ss_dssp HHHHT--CSSSEEECCCTT--TC----CHHHHHHHHHHTSBEEEECTT-CCHHHHHHHHHHHHHHCCSCEEEEECTTSTT
T ss_pred hHHhC--CCCCEEeCCCCC--CC----cHHHHHHHHhCCCcEEeCCCC-CCHHHHHHHHHHHHHhcCCCEEEEecCCCCC
Confidence 34676 788999999984 32 234777788878643443322 233332 2211 1 1 222 332
Q ss_pred HHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHH
Q 039466 131 MAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEW 210 (263)
Q Consensus 131 ~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~ 210 (263)
..+.++++.++|++.+.++.+.| .+.+++
T Consensus 77 -~~~~~~~a~~~g~d~V~~~~g~p--------------------------------------------------~~~i~~ 105 (332)
T 2z6i_A 77 -VEDIVDLVIEEGVKVVTTGAGNP--------------------------------------------------SKYMER 105 (332)
T ss_dssp -HHHHHHHHHHTTCSEEEECSSCG--------------------------------------------------GGTHHH
T ss_pred -HHHHHHHHHHCCCCEEEECCCCh--------------------------------------------------HHHHHH
Confidence 34556677777777776655432 123566
Q ss_pred HHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEEcCC--CCC
Q 039466 211 LRSITNLPILIKGVLTREDAIKAVEVGVAGIIVSNH--GAR 249 (263)
Q Consensus 211 lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~VSNH--GGR 249 (263)
+++ +++||++| |.++++|+.+.+.|+|+|+|+++ ||.
T Consensus 106 l~~-~g~~v~~~-v~~~~~a~~~~~~GaD~i~v~g~~~GG~ 144 (332)
T 2z6i_A 106 FHE-AGIIVIPV-VPSVALAKRMEKIGADAVIAEGMEAGGH 144 (332)
T ss_dssp HHH-TTCEEEEE-ESSHHHHHHHHHTTCSCEEEECTTSSEE
T ss_pred HHH-cCCeEEEE-eCCHHHHHHHHHcCCCEEEEECCCCCCC
Confidence 776 58999988 89999999999999999999765 654
No 31
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.20 E-value=2.9e-06 Score=81.48 Aligned_cols=47 Identities=17% Similarity=0.265 Sum_probs=43.5
Q ss_pred CHHHHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEcCCCCCC
Q 039466 204 SWKDIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVSNHGARQ 250 (263)
Q Consensus 204 ~W~dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VSNHGGRq 250 (263)
.|+.++++++.+ ++||++|+|.+.++|+++.++|||+|+|++|+|..
T Consensus 283 ~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G~~ 330 (514)
T 1jcn_A 283 QIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSI 330 (514)
T ss_dssp HHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSCC
T ss_pred HHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECCCCCcc
Confidence 578899999999 89999999999999999999999999999997743
No 32
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.13 E-value=3.3e-06 Score=80.94 Aligned_cols=59 Identities=15% Similarity=0.173 Sum_probs=49.8
Q ss_pred CHHHHHHHHhhc-C-CCEEEEecCCHHHHHHHHHcCCCEEEEcCCCC-----CCCCC-chhhhcccc
Q 039466 204 SWKDIEWLRSIT-N-LPILIKGVLTREDAIKAVEVGVAGIIVSNHGA-----RQLDY-TPATISALE 262 (263)
Q Consensus 204 ~W~dl~~lr~~~-~-lPiilKGI~s~eDA~~a~~~G~dgI~VSNHGG-----RqlD~-~~~~i~~Lp 262 (263)
.|+.++||++.+ + +|+|++.|.++++|+.++++|+|+|+|++||| |++++ .++++.+|+
T Consensus 270 ~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~ 336 (503)
T 1me8_A 270 QKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVI 336 (503)
T ss_dssp HHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHH
T ss_pred hhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHH
Confidence 578899999998 4 89999999999999999999999999988885 77776 345665554
No 33
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=98.11 E-value=1.6e-05 Score=72.01 Aligned_cols=53 Identities=17% Similarity=0.134 Sum_probs=38.5
Q ss_pred HHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEEcC--CCCCCCCCchhhhcccc
Q 039466 206 KDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIVSN--HGARQLDYTPATISALE 262 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~VSN--HGGRqlD~~~~~i~~Lp 262 (263)
+.++++++. ++|++ ++|.++++|+++.+.|+|+|+|++ +||.+ +.+++++.|+
T Consensus 115 ~~~~~l~~~-g~~v~-~~v~s~~~a~~a~~~GaD~i~v~g~~~GG~~--G~~~~~~ll~ 169 (326)
T 3bo9_A 115 KYIRELKEN-GTKVI-PVVASDSLARMVERAGADAVIAEGMESGGHI--GEVTTFVLVN 169 (326)
T ss_dssp HHHHHHHHT-TCEEE-EEESSHHHHHHHHHTTCSCEEEECTTSSEEC--CSSCHHHHHH
T ss_pred HHHHHHHHc-CCcEE-EEcCCHHHHHHHHHcCCCEEEEECCCCCccC--CCccHHHHHH
Confidence 345666663 66666 579999999999999999999988 77754 2334555443
No 34
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=98.03 E-value=7.4e-05 Score=68.64 Aligned_cols=47 Identities=23% Similarity=0.246 Sum_probs=38.5
Q ss_pred CHHHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEEcC-----CCCCCCC
Q 039466 204 SWKDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIVSN-----HGARQLD 252 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~VSN-----HGGRqlD 252 (263)
+++.++++++ .++|++ +.|.++++|+++.+.|+|+|+|++ |.|+..+
T Consensus 134 ~~~~i~~~~~-~g~~v~-~~v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~ 185 (369)
T 3bw2_A 134 DREVIARLRR-AGTLTL-VTATTPEEARAVEAAGADAVIAQGVEAGGHQGTHRD 185 (369)
T ss_dssp CHHHHHHHHH-TTCEEE-EEESSHHHHHHHHHTTCSEEEEECTTCSEECCCSSC
T ss_pred cHHHHHHHHH-CCCeEE-EECCCHHHHHHHHHcCCCEEEEeCCCcCCcCCCccc
Confidence 5888999988 477765 469999999999999999999976 5566554
No 35
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.93 E-value=6.5e-06 Score=79.13 Aligned_cols=45 Identities=20% Similarity=0.178 Sum_probs=40.1
Q ss_pred HHHHHHHHhhcC-CCEEEEecCCHHHHHHHHHcCCCEEEEcCCCCC
Q 039466 205 WKDIEWLRSITN-LPILIKGVLTREDAIKAVEVGVAGIIVSNHGAR 249 (263)
Q Consensus 205 W~dl~~lr~~~~-lPiilKGI~s~eDA~~a~~~G~dgI~VSNHGGR 249 (263)
++.|+|+++.++ +|||+++|.+.++|+.+.++|+|+|+|++++|.
T Consensus 285 ~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gs 330 (511)
T 3usb_A 285 IDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGS 330 (511)
T ss_dssp HHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCST
T ss_pred hhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCcc
Confidence 467999999986 899999999999999999999999999655554
No 36
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.86 E-value=1.8e-05 Score=75.36 Aligned_cols=46 Identities=20% Similarity=0.180 Sum_probs=42.3
Q ss_pred CHHHHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEcCCCCC
Q 039466 204 SWKDIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVSNHGAR 249 (263)
Q Consensus 204 ~W~dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VSNHGGR 249 (263)
.|+.++++++.+ ++|++.++|.+.++|+.+.++|+|+|.|||.||.
T Consensus 261 ~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~ 307 (491)
T 1zfj_A 261 VLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGS 307 (491)
T ss_dssp HHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCT
T ss_pred HHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCCc
Confidence 578899999999 8999999999999999999999999999985553
No 37
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=97.81 E-value=8.2e-05 Score=68.29 Aligned_cols=157 Identities=10% Similarity=-0.014 Sum_probs=84.8
Q ss_pred eccccccccccccccccCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCcee-ecCCCC----------------
Q 039466 50 WPRILVDVCRIDISTSTLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMV-LSFTSS---------------- 112 (263)
Q Consensus 50 ~pr~L~~v~~~d~st~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~-lss~s~---------------- 112 (263)
.|+.-..+++.|++|+++|.++.-||++|.=... .++ ...+....+|..++ +.|...
T Consensus 25 ~~~~~~~~~~~~L~~~~~Gl~~~NPv~lAAG~~~----~~~--e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~ 98 (354)
T 4ef8_A 25 TGGQQMGRGSMSLQVNLLNNTFANPFMNAAGVMC----TTT--EELVAMTESASGSLVSKSCTPALREGNPTPRYQALPL 98 (354)
T ss_dssp ---------CCCCCEEETTEEESSSEEECTTSSC----SSH--HHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETT
T ss_pred CchhhcCCCCCCcceEECCEECCCCCEeccCCCC----CCH--HHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecch
Confidence 3555556788999999999999999998873221 223 34566666666553 333221
Q ss_pred ----------ccHHH----HHHhc--cc------cc-cCHHHHHHHHHHHH---HcCCCEEEEccCCCCCcchHHHHhhh
Q 039466 113 ----------CSIEE----VAASC--NA------AY-KKRDMAATLVQRAE---RNGFMALVLTADTPRLDRREADIKNK 166 (263)
Q Consensus 113 ----------~siee----V~~~~--~~------~~-~d~~~~~~li~ra~---~aG~~al~vTvD~~~~g~R~~d~r~~ 166 (263)
..++. +.+.. ++ +. .+.+...+.+++++ ++|+++|.|.+-+|..- +
T Consensus 99 ~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~-------g- 170 (354)
T 4ef8_A 99 GSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP-------G- 170 (354)
T ss_dssp EEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCST-------T-
T ss_pred hhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCC-------C-
Confidence 11222 22211 11 11 34455555555555 35666666666655420 0
Q ss_pred hhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEec--CCHHHHHHHH----HcC-CC
Q 039466 167 MIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGV--LTREDAIKAV----EVG-VA 239 (263)
Q Consensus 167 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI--~s~eDA~~a~----~~G-~d 239 (263)
. .. + +.++..-++-++++++.+++||++|=- .+.++..+++ ++| +|
T Consensus 171 --------------------g-~~----l--~~~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d 223 (354)
T 4ef8_A 171 --------------------K-PQ----V--AYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQ 223 (354)
T ss_dssp --------------------S-CC----G--GGSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEE
T ss_pred --------------------c-hh----h--ccCHHHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCcc
Confidence 0 00 0 012222356789999999999999964 3444433333 677 99
Q ss_pred EEEEcCCC
Q 039466 240 GIIVSNHG 247 (263)
Q Consensus 240 gI~VSNHG 247 (263)
+|+++|+-
T Consensus 224 ~I~~~NT~ 231 (354)
T 4ef8_A 224 FITCINSI 231 (354)
T ss_dssp EEEECCCE
T ss_pred EEEEeccc
Confidence 99999975
No 38
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.77 E-value=1.7e-05 Score=75.75 Aligned_cols=56 Identities=20% Similarity=0.283 Sum_probs=45.3
Q ss_pred HHHHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEc-----CCCCCCCCCc-hhhhcc
Q 039466 205 WKDIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVS-----NHGARQLDYT-PATISA 260 (263)
Q Consensus 205 W~dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VS-----NHGGRqlD~~-~~~i~~ 260 (263)
++.++++++.+ ++||+++.|.++++|+.+.++|||+|.|+ +|++|.+++. .+.++.
T Consensus 258 ~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~ 320 (490)
T 4avf_A 258 IERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISA 320 (490)
T ss_dssp HHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHH
T ss_pred HHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHH
Confidence 57899999999 78999988999999999999999999995 5555655554 344443
No 39
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=97.70 E-value=6.3e-05 Score=66.16 Aligned_cols=43 Identities=19% Similarity=0.494 Sum_probs=40.1
Q ss_pred CHHHHHHHHhhcCCCEEEE-ecCCHHHHHHHHHcCCCEEEEcCC
Q 039466 204 SWKDIEWLRSITNLPILIK-GVLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilK-GI~s~eDA~~a~~~G~dgI~VSNH 246 (263)
+|+.|+++++.+++|||+. ||.+++|+.+++++|||||+|++.
T Consensus 166 ~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViVGSA 209 (264)
T 1xm3_A 166 NPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNTA 209 (264)
T ss_dssp CHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHH
Confidence 5899999999999999998 599999999999999999999873
No 40
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=97.63 E-value=0.00021 Score=65.31 Aligned_cols=148 Identities=12% Similarity=0.159 Sum_probs=84.1
Q ss_pred ChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc--cccCHHHHHHHHHHHHH-cCCCEEEEccCCCCCcchHHHH-
Q 039466 88 PEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA--AYKKRDMAATLVQRAER-NGFMALVLTADTPRLDRREADI- 163 (263)
Q Consensus 88 ~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~--~~~d~~~~~~li~ra~~-aG~~al~vTvD~~~~g~R~~d~- 163 (263)
|+.-...|+.+.+.|. -.+.-+..||...+.....| +.++.+...++++...+ .++. |++... .|+.+.+.
T Consensus 69 p~~~~~aA~~a~~~G~-D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~P---V~vKiR-~g~~~~~~~ 143 (350)
T 3b0p_A 69 PKSLAEAARIGEAFGY-DEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVP---VTVKMR-LGLEGKETY 143 (350)
T ss_dssp HHHHHHHHHHHHHTTC-SEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSC---EEEEEE-SCBTTCCCH
T ss_pred HHHHHHHHHHHHHcCC-CEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCc---eEEEEe-cCcCccccH
Confidence 4555577888888885 34455556888887765433 77888888888888765 3433 344321 23321100
Q ss_pred hhhhhhhhhhhhhh--ccccCCCCCCC-ccHHHHHHHhcCCCCCHHHHHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCC
Q 039466 164 KNKMIAQQLKNLEG--LLSTKVTSDTG-SNLEAYAKETMDPSLSWKDIEWLRSIT-NLPILIKG-VLTREDAIKAVEVGV 238 (263)
Q Consensus 164 r~~~~~p~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~W~dl~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~ 238 (263)
.+...+. +.+.. ...-.+..... .+.... .....+..+|+.++.+++.+ ++|||+-| |.|++||+++++ ||
T Consensus 144 ~~~~~~a--~~l~~aG~d~I~V~~r~~~~g~~g~-~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-Ga 219 (350)
T 3b0p_A 144 RGLAQSV--EAMAEAGVKVFVVHARSALLALSTK-ANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RV 219 (350)
T ss_dssp HHHHHHH--HHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TS
T ss_pred HHHHHHH--HHHHHcCCCEEEEecCchhcccCcc-cccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CC
Confidence 0000010 11110 00000000000 000000 00112356899999999999 99999999 999999999998 99
Q ss_pred CEEEEc
Q 039466 239 AGIIVS 244 (263)
Q Consensus 239 dgI~VS 244 (263)
|+|+|.
T Consensus 220 D~V~iG 225 (350)
T 3b0p_A 220 DGVMLG 225 (350)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 999985
No 41
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.62 E-value=0.00026 Score=60.99 Aligned_cols=43 Identities=12% Similarity=0.270 Sum_probs=40.5
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+|+.++++++..++|||.-| |.+++|+.++.+.||||++|+.
T Consensus 183 ~~~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgs 226 (252)
T 1ka9_F 183 YDLRLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAGAEAALAAS 226 (252)
T ss_dssp CCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred CCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHH
Confidence 479999999999999999998 9999999999999999999975
No 42
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.60 E-value=4.7e-05 Score=72.89 Aligned_cols=41 Identities=29% Similarity=0.289 Sum_probs=38.0
Q ss_pred HHHHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
++.++++++.+ ++||+++.|.++++|+.+.++|||+|+|++
T Consensus 260 ~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~ 301 (496)
T 4fxs_A 260 LQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGI 301 (496)
T ss_dssp HHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECC
Confidence 46799999998 799999889999999999999999999983
No 43
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=97.54 E-value=0.00048 Score=62.94 Aligned_cols=139 Identities=13% Similarity=0.088 Sum_probs=84.4
Q ss_pred cccceeecccCCcccCCChhHHHHHHHHHHCCC-ceeecCCCCc-cH-----HHHHHhcc-c------c-ccCHHHHHHH
Q 039466 71 ISASIIIAPTGLHKLANPEGEVATARAAASCNT-IMVLSFTSSC-SI-----EEVAASCN-A------A-YKKRDMAATL 135 (263)
Q Consensus 71 ~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi-~~~lss~s~~-si-----eeV~~~~~-~------~-~~d~~~~~~l 135 (263)
+..||++|||++ . .+ ..+...+.+.|- .++++-..+. ++ +++.+..+ + + -.+++...+.
T Consensus 2 l~nriv~APM~g--~--td--~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~p~~~~~a 75 (350)
T 3b0p_A 2 LDPRLSVAPMVD--R--TD--RHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLAGSDPKSLAEA 75 (350)
T ss_dssp CCCSEEECCCTT--T--SS--HHHHHHHHHHCSSSBEECCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEECSCHHHHHHH
T ss_pred CCCCEEECCCCC--C--CH--HHHHHHHHHcCCCCEEEeCCEEechhhcCCHHHHhccCCCCCeEEEEeCCCCHHHHHHH
Confidence 567999999985 2 22 333334555553 3444332211 11 12332222 1 2 2578888888
Q ss_pred HHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhc
Q 039466 136 VQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSIT 215 (263)
Q Consensus 136 i~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~ 215 (263)
.++++++||+.|-++..+|..-.|. .++.- . -..++.+-.+-++.+++.+
T Consensus 76 A~~a~~~G~D~IeIn~gcP~~~~~~----d~~G~--------------------~------l~~~~~~~~eiv~av~~~v 125 (350)
T 3b0p_A 76 ARIGEAFGYDEINLNLGCPSEKAQE----GGYGA--------------------C------LLLDLARVREILKAMGEAV 125 (350)
T ss_dssp HHHHHHTTCSEEEEEECCCSHHHHH----TTCGG--------------------G------GGGCHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEECCcCCCCcCcC----CCcch--------------------h------HHhCHHHHHHHHHHHHHHh
Confidence 9999999999999999988631111 11100 0 0112333456788899999
Q ss_pred CCCEEEEe---cC-------CHHHHHHHHHcCCCEEEEcC
Q 039466 216 NLPILIKG---VL-------TREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 216 ~lPiilKG---I~-------s~eDA~~a~~~G~dgI~VSN 245 (263)
++||.+|- +. ..+-|+.+.++|+|+|.|++
T Consensus 126 ~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~ 165 (350)
T 3b0p_A 126 RVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHA 165 (350)
T ss_dssp SSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEec
Confidence 99999974 32 24557788899999999953
No 44
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=97.51 E-value=0.00044 Score=64.61 Aligned_cols=37 Identities=30% Similarity=0.417 Sum_probs=29.9
Q ss_pred CCC-EEEEec--CCH----HHHHHHHHcCCCEEEEcCCCCCCCC
Q 039466 216 NLP-ILIKGV--LTR----EDAIKAVEVGVAGIIVSNHGARQLD 252 (263)
Q Consensus 216 ~lP-iilKGI--~s~----eDA~~a~~~G~dgI~VSNHGGRqlD 252 (263)
+.| |++|=- ++. +=|+.+.++|+|||+|+||.++++|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~d 311 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQIND 311 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCccccc
Confidence 689 999964 342 2377788899999999999998876
No 45
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.49 E-value=0.00042 Score=59.75 Aligned_cols=44 Identities=23% Similarity=0.374 Sum_probs=40.1
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
..+|+.++.+++.+++||++.| |.+++|++++++.|||+|+|..
T Consensus 65 ~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~ 109 (247)
T 3tdn_A 65 GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINT 109 (247)
T ss_dssp CCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCSH
T ss_pred cccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehhh
Confidence 3578999999999999999998 9999999999999999998753
No 46
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.47 E-value=0.00067 Score=58.92 Aligned_cols=43 Identities=23% Similarity=0.395 Sum_probs=40.5
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+|+.++++++..++|||.-| |.+++|+.++.++||||++|..
T Consensus 187 ~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~Gadgv~vgs 230 (266)
T 2w6r_A 187 YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAAS 230 (266)
T ss_dssp CCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEEST
T ss_pred CCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcCCHHHHccH
Confidence 479999999999999999998 9999999999999999999976
No 47
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.40 E-value=0.00093 Score=57.49 Aligned_cols=44 Identities=23% Similarity=0.389 Sum_probs=40.9
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.++|+.++++++..++|||.-| |.+++|+.++.+.||||++|..
T Consensus 181 g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vGs 225 (253)
T 1thf_D 181 GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAAS 225 (253)
T ss_dssp CCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred CCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCChHHHHHH
Confidence 3589999999999999999998 9999999999999999999975
No 48
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.40 E-value=0.00071 Score=61.37 Aligned_cols=125 Identities=14% Similarity=0.165 Sum_probs=78.4
Q ss_pred ChhHHHHHHHHHHCC--Ccee-ecC-CC--Cc---cHHHHHHhccc--cccCHHHHHHHHHHHHHcCCCEEEEccCCCCC
Q 039466 88 PEGEVATARAAASCN--TIMV-LSF-TS--SC---SIEEVAASCNA--AYKKRDMAATLVQRAERNGFMALVLTADTPRL 156 (263)
Q Consensus 88 ~~ge~a~AraA~~~g--i~~~-lss-~s--~~---sieeV~~~~~~--~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~ 156 (263)
...+...++.+.+.| ..++ +.. .. .. -+++|++..++ +.+..-.+.+..++++++|+++|+|.- .
T Consensus 104 ~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~----h 179 (336)
T 1ypf_A 104 KEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGI----G 179 (336)
T ss_dssp SHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECS----S
T ss_pred CHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEec----C
Confidence 344567788888888 5443 211 11 11 24455565543 222101234567888999999999832 1
Q ss_pred cchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHH
Q 039466 157 DRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVE 235 (263)
Q Consensus 157 g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~ 235 (263)
|.|..+.+ + ......+.++|+.|.++++..++|||.-| |.+++|+.+|+.
T Consensus 180 gG~~~~~~-----~------------------------~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kala 230 (336)
T 1ypf_A 180 PGKVCITK-----I------------------------KTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSIR 230 (336)
T ss_dssp CSTTCHHH-----H------------------------HHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHHH
T ss_pred CCceeecc-----c------------------------ccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHH
Confidence 22211110 0 00011133578899999999999999998 999999999999
Q ss_pred cCCCEEEEcC
Q 039466 236 VGVAGIIVSN 245 (263)
Q Consensus 236 ~G~dgI~VSN 245 (263)
+|||+|+|..
T Consensus 231 lGAdaV~iGr 240 (336)
T 1ypf_A 231 FGATMVMIGS 240 (336)
T ss_dssp TTCSEEEESG
T ss_pred cCCCEEEeCh
Confidence 9999999853
No 49
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=97.37 E-value=0.0028 Score=58.33 Aligned_cols=35 Identities=34% Similarity=0.475 Sum_probs=28.0
Q ss_pred cCCCEEEEec--CCHH----HHHHHHHcCCCEEEEcCCC-CC
Q 039466 215 TNLPILIKGV--LTRE----DAIKAVEVGVAGIIVSNHG-AR 249 (263)
Q Consensus 215 ~~lPiilKGI--~s~e----DA~~a~~~G~dgI~VSNHG-GR 249 (263)
+++||++|-- .+.+ -|+.+.++|+|||+|+|+. +|
T Consensus 219 ~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r 260 (367)
T 3zwt_A 219 HRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSR 260 (367)
T ss_dssp GCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCC
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCccc
Confidence 7899999964 3433 3777888999999999997 45
No 50
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=97.33 E-value=0.00082 Score=57.86 Aligned_cols=42 Identities=19% Similarity=0.170 Sum_probs=38.9
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
..+|+-++++++. ++|||.-| |.+++|+.++.++||+||+|.
T Consensus 168 ~~~~~li~~l~~~-~ipvIA~GGI~t~~d~~~~~~~GadgV~VG 210 (229)
T 3q58_A 168 EPDLAMVTQLSHA-GCRVIAEGRYNTPALAANAIEHGAWAVTVG 210 (229)
T ss_dssp SCCHHHHHHHHTT-TCCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCCHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 3489999999998 99999999 999999999999999999996
No 51
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=97.32 E-value=0.0037 Score=58.90 Aligned_cols=50 Identities=22% Similarity=0.247 Sum_probs=32.4
Q ss_pred CHHHHHHHHhh--------cCCC-EEEEec--CCHHH----HHHHHHcCCCEEEEcCCCCCCCCC
Q 039466 204 SWKDIEWLRSI--------TNLP-ILIKGV--LTRED----AIKAVEVGVAGIIVSNHGARQLDY 253 (263)
Q Consensus 204 ~W~dl~~lr~~--------~~lP-iilKGI--~s~eD----A~~a~~~G~dgI~VSNHGGRqlD~ 253 (263)
+-.+++++.+. +++| |++|-- ++.+| |+.+.++|+|||+|+|+..+++|.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~ 340 (443)
T 1tv5_A 276 NNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDI 340 (443)
T ss_dssp ------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCC
T ss_pred cchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccc
Confidence 34455555544 6789 999953 45556 888899999999999999987763
No 52
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.31 E-value=0.00097 Score=57.49 Aligned_cols=41 Identities=15% Similarity=0.155 Sum_probs=38.5
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
.+|+-++++++. ++|||.-| |.+++|+.++.++||+|++|.
T Consensus 169 ~~~~~i~~l~~~-~ipvIA~GGI~t~~d~~~~~~~GadgV~VG 210 (232)
T 3igs_A 169 PDLPLVKALHDA-GCRVIAEGRYNSPALAAEAIRYGAWAVTVG 210 (232)
T ss_dssp CCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcCCCEEEEe
Confidence 489999999998 99999998 999999999999999999995
No 53
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.29 E-value=0.00074 Score=57.94 Aligned_cols=43 Identities=19% Similarity=0.317 Sum_probs=40.6
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHc-----C-CCEEEEcC
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEV-----G-VAGIIVSN 245 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~-----G-~dgI~VSN 245 (263)
.+|+.++++++..++|||.-| |.+++|++++.+. | |||++|..
T Consensus 175 ~~~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgs 224 (241)
T 1qo2_A 175 HDFSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGR 224 (241)
T ss_dssp CCHHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECH
T ss_pred CCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeH
Confidence 589999999999999999999 9999999999998 9 99999975
No 54
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.27 E-value=0.00023 Score=61.44 Aligned_cols=42 Identities=24% Similarity=0.385 Sum_probs=0.0
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
.+|+.++++++.+++|||.-| |.+++|+.++++.|||||+|.
T Consensus 187 ~~~~~~~~i~~~~~iPvia~GGI~~~~d~~~~~~~Gad~v~vg 229 (247)
T 3tdn_A 187 YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSIN 229 (247)
T ss_dssp -------------------------------------------
T ss_pred CCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHcCCcHhhcc
Confidence 578899999999999999998 999999999999999999986
No 55
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.18 E-value=0.0012 Score=56.67 Aligned_cols=41 Identities=15% Similarity=0.239 Sum_probs=37.9
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
.|+.++.+++.+++||+++| |.+++|+..+++.|||+|++.
T Consensus 62 ~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg 103 (253)
T 1thf_D 62 MLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSIN 103 (253)
T ss_dssp HHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred cHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 46788999999999999998 999999999999999999874
No 56
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=97.17 E-value=0.00077 Score=74.00 Aligned_cols=157 Identities=13% Similarity=0.055 Sum_probs=90.5
Q ss_pred eecccccc-ccccccccc---cCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCceeecCCCCccHHHHH-----
Q 039466 49 FWPRILVD-VCRIDISTS---TLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLSFTSSCSIEEVA----- 119 (263)
Q Consensus 49 l~pr~L~~-v~~~d~st~---~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV~----- 119 (263)
|.||..+- -.+++++|. +|| ..||+.|||+..- .+-.+|.|+.++|-.-+++.....+.|++.
T Consensus 558 f~prlv~~~~~~~~l~t~~t~~lg---~~PIi~a~M~~~v-----s~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~ 629 (2060)
T 2uva_G 558 HGPRLVKTSVGQTFVDTKMSRLLG---VPPVMVAGMTPTT-----VPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISK 629 (2060)
T ss_dssp HCCEEEECTTCCEEEECHHHHHHT---SCSEEECCCTTTT-----CSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHH
T ss_pred cCCcceecCCCceecchhhhhccc---cceEEecCCCCcc-----ccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHH
Confidence 56877752 233455544 577 5999999998421 244588889999977777333333444332
Q ss_pred --Hhcc-c-------cccCHH---HHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCC
Q 039466 120 --ASCN-A-------AYKKRD---MAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSD 186 (263)
Q Consensus 120 --~~~~-~-------~~~d~~---~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~ 186 (263)
+..+ + ++.++. ...++++.+.+.|+....|++..
T Consensus 630 vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~--------------------------------- 676 (2060)
T 2uva_G 630 IEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGA--------------------------------- 676 (2060)
T ss_dssp HGGGSCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEES---------------------------------
T ss_pred HHhhcccCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEeecC---------------------------------
Confidence 1110 1 111221 12244444444554431111110
Q ss_pred CCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEecCCHHHHHHH----HHcCCCEEE--------EcCCCCCCCCCc
Q 039466 187 TGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGVLTREDAIKA----VEVGVAGII--------VSNHGARQLDYT 254 (263)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI~s~eDA~~a----~~~G~dgI~--------VSNHGGRqlD~~ 254 (263)
+..+-+++..+.+..++|+| +-|.+..+|+++ .++|+|+|+ .++|.|+ .|..
T Consensus 677 --------------G~p~~e~~~~~l~~~gi~~i-~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~-~d~~ 740 (2060)
T 2uva_G 677 --------------GVPSIEVANEYIQTLGIRHI-SFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSF-EDFH 740 (2060)
T ss_dssp --------------SCCCHHHHHHHHHHSCCSEE-EECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCS-CCSH
T ss_pred --------------CCCCHHHHHHHHHHcCCeEE-EecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCc-cccc
Confidence 11233444445555689988 668999999998 899999999 6788886 3555
Q ss_pred hhhhcccc
Q 039466 255 PATISALE 262 (263)
Q Consensus 255 ~~~i~~Lp 262 (263)
.++++.+|
T Consensus 741 ~~~l~lv~ 748 (2060)
T 2uva_G 741 QPILLMYS 748 (2060)
T ss_dssp HHHHHHHH
T ss_pred chHHHHHH
Confidence 55655554
No 57
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=97.16 E-value=0.0018 Score=56.86 Aligned_cols=42 Identities=14% Similarity=0.328 Sum_probs=38.5
Q ss_pred CHHHHHHHHh-hcC-CCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRS-ITN-LPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~-~~~-lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.+.|+.+++ ..+ +|||+=| |-+++||.+|.++|||||+|..
T Consensus 164 ~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgS 208 (268)
T 2htm_A 164 TRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNT 208 (268)
T ss_dssp THHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESH
T ss_pred CHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 6777999999 778 9999988 9999999999999999999875
No 58
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=97.15 E-value=0.0022 Score=58.39 Aligned_cols=37 Identities=30% Similarity=0.213 Sum_probs=30.5
Q ss_pred HHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 208 IEWLRSIT-NLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 208 l~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
+..+++.. ++|||.-| |.|++||.+.+.+||++|.|.
T Consensus 268 v~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~ 306 (354)
T 3tjx_A 268 INAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp HHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEEC
T ss_pred HHHHHHhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEEC
Confidence 34444444 68999887 999999999999999999885
No 59
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.12 E-value=0.0028 Score=53.80 Aligned_cols=43 Identities=14% Similarity=0.261 Sum_probs=40.3
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
++|+.++++++.+++||++-| |.+++|+.++.++|++|++|.+
T Consensus 185 ~~~~~i~~l~~~~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgs 228 (253)
T 1h5y_A 185 YDVELIRRVADSVRIPVIASGGAGRVEHFYEAAAAGADAVLAAS 228 (253)
T ss_dssp CCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred CCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHHHcCCcHHHHHH
Confidence 489999999999999999998 9999999999999999999976
No 60
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=97.11 E-value=0.00057 Score=60.41 Aligned_cols=40 Identities=28% Similarity=0.420 Sum_probs=36.1
Q ss_pred HHHHHHHhhcCCCEEE-EecCCHHHHHHHHHcCCCEEEEcC
Q 039466 206 KDIEWLRSITNLPILI-KGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 206 ~dl~~lr~~~~lPiil-KGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.++++|+.+++|+++ -||.++|+++++++.|+||+||.+
T Consensus 198 ~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGS 238 (271)
T 3nav_A 198 ALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGS 238 (271)
T ss_dssp HHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 5689999999999998 459999999999999999999964
No 61
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=97.11 E-value=0.0041 Score=52.38 Aligned_cols=117 Identities=15% Similarity=0.110 Sum_probs=73.8
Q ss_pred ChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc-cc----cCH-H------HHHHHHHHHHHcCCCEEEEccCCCC
Q 039466 88 PEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA-AY----KKR-D------MAATLVQRAERNGFMALVLTADTPR 155 (263)
Q Consensus 88 ~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~-~~----~d~-~------~~~~li~ra~~aG~~al~vTvD~~~ 155 (263)
++--..+|+++.+.|...+. ..+...+++|++...- +. ++. + ...+.++.+.++|++.+.+.....
T Consensus 22 ~~~~~~~a~~~~~~Ga~~i~-~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~- 99 (223)
T 1y0e_A 22 SFIMSKMALAAYEGGAVGIR-ANTKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQ- 99 (223)
T ss_dssp HHHHHHHHHHHHHHTCSEEE-EESHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCS-
T ss_pred CccHHHHHHHHHHCCCeeec-cCCHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecc-
Confidence 34445899999999986643 2222334555554321 11 110 0 123345666778888776654321
Q ss_pred CcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCH-HHHHHHHhhcCCCEEEEecCCHHHHHHHH
Q 039466 156 LDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSW-KDIEWLRSITNLPILIKGVLTREDAIKAV 234 (263)
Q Consensus 156 ~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W-~dl~~lr~~~~lPiilKGI~s~eDA~~a~ 234 (263)
.++..++ +-++++|+.++..+++.++.++++++++.
T Consensus 100 -------------------------------------------~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~~~ 136 (223)
T 1y0e_A 100 -------------------------------------------QRPKETLDELVSYIRTHAPNVEIMADIATVEEAKNAA 136 (223)
T ss_dssp -------------------------------------------CCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHHHHH
T ss_pred -------------------------------------------cCcccCHHHHHHHHHHhCCCceEEecCCCHHHHHHHH
Confidence 0121233 45889999885555666899999999999
Q ss_pred HcCCCEEEEcCCCCC
Q 039466 235 EVGVAGIIVSNHGAR 249 (263)
Q Consensus 235 ~~G~dgI~VSNHGGR 249 (263)
+.|+|.|.++|||.+
T Consensus 137 ~~G~d~i~~~~~g~t 151 (223)
T 1y0e_A 137 RLGFDYIGTTLHGYT 151 (223)
T ss_dssp HTTCSEEECTTTTSS
T ss_pred HcCCCEEEeCCCcCc
Confidence 999999999998764
No 62
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.10 E-value=0.00065 Score=58.44 Aligned_cols=41 Identities=22% Similarity=0.265 Sum_probs=37.8
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
.|+.++.+++.+++||+++| |.++++++.+++.|||+|++.
T Consensus 63 ~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg 104 (252)
T 1ka9_F 63 LLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVN 104 (252)
T ss_dssp HHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred cHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 46788999999999999999 899999999999999999884
No 63
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.08 E-value=0.01 Score=57.00 Aligned_cols=44 Identities=20% Similarity=0.463 Sum_probs=38.6
Q ss_pred HHHHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEcCCCC
Q 039466 205 WKDIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVSNHGA 248 (263)
Q Consensus 205 W~dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VSNHGG 248 (263)
.+.++|||+.. ++|||.=.|-+.|-|+.++++|||+|-|.=-+|
T Consensus 310 ~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpG 354 (556)
T 4af0_A 310 IEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSG 354 (556)
T ss_dssp HHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCS
T ss_pred HHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecCCCC
Confidence 46799999987 578888889999999999999999999876666
No 64
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=97.07 E-value=0.00073 Score=62.22 Aligned_cols=42 Identities=24% Similarity=0.378 Sum_probs=38.8
Q ss_pred CHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+|+.++.+++.. ++|||.-| |.|++||.+++++|||+|.|..
T Consensus 284 a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgr 328 (367)
T 3zwt_A 284 STQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 328 (367)
T ss_dssp HHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred HHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 578899999999 89999999 9999999999999999999863
No 65
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.07 E-value=0.0018 Score=55.41 Aligned_cols=44 Identities=23% Similarity=0.344 Sum_probs=40.8
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHc---CCCEEEEcC
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEV---GVAGIIVSN 245 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~---G~dgI~VSN 245 (263)
.++|+.++++++..++|||.-| |.+++|+.++.+. ||+|++|..
T Consensus 179 g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~ 226 (244)
T 2y88_A 179 GPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGK 226 (244)
T ss_dssp CCCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECH
T ss_pred CCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcH
Confidence 3589999999999999999999 9999999999998 999999864
No 66
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=97.07 E-value=0.0035 Score=54.93 Aligned_cols=43 Identities=28% Similarity=0.261 Sum_probs=38.8
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcCC
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSNH 246 (263)
..+.++++|+.+++||++=| |.++|++.++++.|||++||.+.
T Consensus 193 ~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVGSa 236 (268)
T 1qop_A 193 LHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGSA 236 (268)
T ss_dssp CHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEEChH
Confidence 46789999999999999877 89999999999999999999753
No 67
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=97.06 E-value=0.00079 Score=60.50 Aligned_cols=138 Identities=17% Similarity=0.303 Sum_probs=84.5
Q ss_pred ChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc--cccCHHHHHHHHHHHHH-cCCCEEEEccCCCCCcchHHHHh
Q 039466 88 PEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA--AYKKRDMAATLVQRAER-NGFMALVLTADTPRLDRREADIK 164 (263)
Q Consensus 88 ~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~--~~~d~~~~~~li~ra~~-aG~~al~vTvD~~~~g~R~~d~r 164 (263)
|+.-...|+.|.++ .-.+--+..||...++....| +.++++...++++...+ .+ +.|+|+... |+...+..
T Consensus 70 ~~~~~~aa~~a~~~--~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~---~pv~vKir~-G~~~~~~~ 143 (318)
T 1vhn_A 70 PNELSEAARILSEK--YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVS---GKFSVKTRL-GWEKNEVE 143 (318)
T ss_dssp HHHHHHHHHHHTTT--CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCS---SEEEEEEES-CSSSCCHH
T ss_pred HHHHHHHHHHHHHh--CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhC---CCEEEEecC-CCChHHHH
Confidence 34444566666665 445555666888877765443 78899999999988865 35 456666432 55432211
Q ss_pred hhhhhhhhhhhhh--ccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHH-cCCCE
Q 039466 165 NKMIAQQLKNLEG--LLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVE-VGVAG 240 (263)
Q Consensus 165 ~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~-~G~dg 240 (263)
.+. +.+.. ...-.+.... ..+.+.+..+|+.++.+++ ++|||.-| |.+++||.++++ .|||+
T Consensus 144 ---~~a--~~l~~~G~d~i~v~g~~-------~~~~~~~~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~ 209 (318)
T 1vhn_A 144 ---EIY--RILVEEGVDEVFIHTRT-------VVQSFTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDG 209 (318)
T ss_dssp ---HHH--HHHHHTTCCEEEEESSC-------TTTTTSSCCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSE
T ss_pred ---HHH--HHHHHhCCCEEEEcCCC-------ccccCCCCcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCE
Confidence 111 11110 0000000000 0011234568988888888 99999999 999999999999 79999
Q ss_pred EEEcC
Q 039466 241 IIVSN 245 (263)
Q Consensus 241 I~VSN 245 (263)
|+|+-
T Consensus 210 V~iGR 214 (318)
T 1vhn_A 210 LLVAR 214 (318)
T ss_dssp EEESG
T ss_pred EEECH
Confidence 99853
No 68
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.03 E-value=0.002 Score=55.82 Aligned_cols=44 Identities=23% Similarity=0.359 Sum_probs=40.1
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcCC
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSNH 246 (263)
.+++.++.+++.+++||+++| |-+.+|+..+++.|+|+|++..-
T Consensus 61 ~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~ 105 (266)
T 2w6r_A 61 YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAASV 105 (266)
T ss_dssp CCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCCC
T ss_pred ccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHH
Confidence 368899999999999999999 89999999999999999998653
No 69
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.02 E-value=0.003 Score=53.95 Aligned_cols=39 Identities=15% Similarity=0.213 Sum_probs=36.7
Q ss_pred HHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 206 KDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
+.|+.+++.+++||+++| |.++++++.++++|||+|.+.
T Consensus 64 ~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg 103 (244)
T 2y88_A 64 ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVG 103 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 779999999999999998 999999999999999999874
No 70
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.02 E-value=0.0017 Score=55.57 Aligned_cols=44 Identities=23% Similarity=0.345 Sum_probs=41.1
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHc---CCCEEEEcC
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEV---GVAGIIVSN 245 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~---G~dgI~VSN 245 (263)
.++|+.++++++..++|||.-| |.+++|+.++.++ ||+|++|..
T Consensus 176 g~~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~ 223 (244)
T 1vzw_A 176 GPNLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGK 223 (244)
T ss_dssp CCCHHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECH
T ss_pred CCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCCCceeeeeH
Confidence 3689999999999999999999 9999999999999 999999975
No 71
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=96.99 E-value=0.0014 Score=57.81 Aligned_cols=41 Identities=22% Similarity=0.241 Sum_probs=37.4
Q ss_pred HHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+.++++|+.+++||++=| |.++|+++++++.|+||+||.+
T Consensus 195 ~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGS 236 (267)
T 3vnd_A 195 ENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISGS 236 (267)
T ss_dssp HHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECH
Confidence 4679999999999999876 9999999999999999999975
No 72
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=96.98 E-value=0.004 Score=56.21 Aligned_cols=43 Identities=14% Similarity=0.283 Sum_probs=39.7
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
..+|+.++.+++..++|||+=| |.+++|+..+++.|+|||+|+
T Consensus 148 ~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 148 LTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp SCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred ccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEec
Confidence 3578889999999999999998 999999999999999999986
No 73
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=96.95 E-value=0.0017 Score=58.91 Aligned_cols=43 Identities=16% Similarity=0.182 Sum_probs=38.9
Q ss_pred CCHHHHHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 203 LSWKDIEWLRSIT-NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 203 ~~W~dl~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+|+.|+++++.. ++|||.-| |.+++|+.+++..|||+|.|+.
T Consensus 237 ~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~ 281 (349)
T 1p0k_A 237 STAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAG 281 (349)
T ss_dssp CHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred cHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHcCCCEEEEcH
Confidence 3688899999886 89999998 9999999999999999999863
No 74
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.94 E-value=0.0028 Score=61.36 Aligned_cols=75 Identities=13% Similarity=0.153 Sum_probs=60.3
Q ss_pred HHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHH
Q 039466 132 AATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWL 211 (263)
Q Consensus 132 ~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~l 211 (263)
..+++++++++|+..+++| |... .... ...+|+-++.|
T Consensus 454 ~~e~a~~~~~~Ga~~il~t-~~~~----------------------------------------dG~~-~G~d~~li~~l 491 (555)
T 1jvn_A 454 VWELTRACEALGAGEILLN-CIDK----------------------------------------DGSN-SGYDLELIEHV 491 (555)
T ss_dssp HHHHHHHHHHTTCCEEEEC-CGGG----------------------------------------TTTC-SCCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEe-CCCC----------------------------------------CCCC-CCCCHHHHHHH
Confidence 4578999999999999875 2100 0011 23589999999
Q ss_pred HhhcCCCEEEEe-cCCHHHHHHHHH-cCCCEEEEcC--CCC
Q 039466 212 RSITNLPILIKG-VLTREDAIKAVE-VGVAGIIVSN--HGA 248 (263)
Q Consensus 212 r~~~~lPiilKG-I~s~eDA~~a~~-~G~dgI~VSN--HGG 248 (263)
++..++|||.-| |.+++|++++.+ .||+|++|.. |+|
T Consensus 492 ~~~~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~~ 532 (555)
T 1jvn_A 492 KDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRG 532 (555)
T ss_dssp HHHCSSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHTT
T ss_pred HHhCCccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHcC
Confidence 999999999999 999999999998 8999999987 655
No 75
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.92 E-value=0.00038 Score=66.24 Aligned_cols=37 Identities=8% Similarity=0.101 Sum_probs=34.8
Q ss_pred HHHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEE
Q 039466 205 WKDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~V 243 (263)
++.++||++.|++|+|+|+|.++++|+.+. |+|+|.|
T Consensus 257 L~~I~~l~~~~~vpvi~k~v~~~~~a~~l~--G~d~v~v 293 (486)
T 2cu0_A 257 IKSMKEMRQKVDADFIVGNIANPKAVDDLT--FADAVKV 293 (486)
T ss_dssp HHHHHHHHHTCCSEEEEEEECCHHHHTTCT--TSSEEEE
T ss_pred hhHHHHHHHHhCCccccCCcCCHHHHHHhh--CCCeEEE
Confidence 367999999999999999999999999888 9999999
No 76
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=96.91 E-value=0.0025 Score=54.59 Aligned_cols=42 Identities=26% Similarity=0.147 Sum_probs=38.1
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
..+|+.++.++ ..++||+++| |.+.+|+.++++.|||+|++.
T Consensus 60 ~~~~~~i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg 102 (241)
T 1qo2_A 60 GENLPVLEKLS-EFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVS 102 (241)
T ss_dssp CTTHHHHHHGG-GGGGGEEEESSCCSHHHHHHHHHTTCCEEEEC
T ss_pred chhHHHHHHHH-hcCCcEEEECCCCCHHHHHHHHHCCCCEEEEC
Confidence 35688999999 8899999999 999999999999999999874
No 77
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.0017 Score=56.96 Aligned_cols=47 Identities=19% Similarity=0.210 Sum_probs=43.9
Q ss_pred CCHHHHHHHHhhc----CCCEEEEe-cCCHHHHHHHHHc--CCCEEEEcC----CCCC
Q 039466 203 LSWKDIEWLRSIT----NLPILIKG-VLTREDAIKAVEV--GVAGIIVSN----HGAR 249 (263)
Q Consensus 203 ~~W~dl~~lr~~~----~lPiilKG-I~s~eDA~~a~~~--G~dgI~VSN----HGGR 249 (263)
.+|+-++.+++.. ++|||.-| |.|+||++++.+. |++|++|.. |+|+
T Consensus 188 ~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~l~~g~ 245 (260)
T 2agk_A 188 IDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIFGGN 245 (260)
T ss_dssp CCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBGGGTCS
T ss_pred CCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHHHcCCC
Confidence 4999999999999 99999999 9999999999998 999999987 8885
No 78
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.89 E-value=0.0018 Score=56.48 Aligned_cols=82 Identities=20% Similarity=0.227 Sum_probs=60.7
Q ss_pred HHHHhccc--cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHH
Q 039466 117 EVAASCNA--AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAY 194 (263)
Q Consensus 117 eV~~~~~~--~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 194 (263)
||.++.|. +.++ ....++.+..+++|+.+|-|-.|...
T Consensus 51 E~k~aSPskg~i~~-~~p~~~A~~~~~~GA~~isvlt~~~~--------------------------------------- 90 (254)
T 1vc4_A 51 EVKRQSPSEGLIRE-VDPVEAALAYARGGARAVSVLTEPHR--------------------------------------- 90 (254)
T ss_dssp EECSCCTTTCCCCS-CCHHHHHHHHHHTTCSEEEEECCCSS---------------------------------------
T ss_pred eecCCCcCCCcCCC-CCHHHHHHHHHHcCCCEEEEecchhh---------------------------------------
Confidence 44444553 4454 44567788888999998876323111
Q ss_pred HHHhcCCCCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 195 AKETMDPSLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 195 ~~~~~~~~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
+.+ +.++|+.+|+.+++||+.|+ |.+..+...|.++|||+|.+.
T Consensus 91 ----f~G--~~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~ 135 (254)
T 1vc4_A 91 ----FGG--SLLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLI 135 (254)
T ss_dssp ----SCC--CHHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEE
T ss_pred ----hcc--CHHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCCEEEEC
Confidence 111 45799999999999999999 889989999999999999874
No 79
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=96.89 E-value=0.0053 Score=52.48 Aligned_cols=44 Identities=20% Similarity=0.332 Sum_probs=39.1
Q ss_pred CCCCHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 201 PSLSWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
+..+|++++.+++.. ++||+.-| |.|++||.+.+++||+.|=+|
T Consensus 158 gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s 204 (225)
T 1mzh_A 158 RGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTS 204 (225)
T ss_dssp SCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred CCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHc
Confidence 446999999999987 69999999 999999999999999976555
No 80
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=96.89 E-value=0.004 Score=53.24 Aligned_cols=39 Identities=10% Similarity=0.201 Sum_probs=36.6
Q ss_pred HHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 206 KDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
+.++.+++.+++||+++| |.+++++..++++|||+|.+.
T Consensus 65 ~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg 104 (244)
T 1vzw_A 65 ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLG 104 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 679999999999999998 999999999999999999875
No 81
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=96.88 E-value=0.0034 Score=57.27 Aligned_cols=41 Identities=17% Similarity=0.277 Sum_probs=38.2
Q ss_pred CHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 204 SWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
.|+.+..+++.. ++|||.-| |.|++||.+++++|||+|.|.
T Consensus 261 a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~ig 304 (345)
T 3oix_A 261 ALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIG 304 (345)
T ss_dssp HHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEC
Confidence 588899999999 69999998 999999999999999999985
No 82
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=96.87 E-value=0.0048 Score=55.45 Aligned_cols=43 Identities=14% Similarity=0.193 Sum_probs=40.0
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+|+.++.+++..++|||+=| |.+++|+.++++.|+|||+|+.
T Consensus 159 ~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al~~GAdgV~vGs 202 (328)
T 2gjl_A 159 PGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGT 202 (328)
T ss_dssp CHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred cHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 589999999999999999999 9999999999999999999973
No 83
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=96.87 E-value=0.00066 Score=56.98 Aligned_cols=46 Identities=17% Similarity=0.382 Sum_probs=41.5
Q ss_pred CCCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcCC
Q 039466 201 PSLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSNH 246 (263)
|..--+-|+++++.++.|||.=| |.+.||+..|+++||++|..||.
T Consensus 135 PGi~p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 135 PGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp CTTCHHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEECCG
T ss_pred CchhHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCH
Confidence 33445779999999999999999 99999999999999999999985
No 84
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=96.85 E-value=0.0023 Score=58.79 Aligned_cols=43 Identities=19% Similarity=0.278 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 202 SLSWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 202 ~~~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
..+|+-|.++++.. ++|||.-| |.+++|+.+++..|||+|.|.
T Consensus 268 ~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iG 313 (368)
T 2nli_A 268 PGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALG 313 (368)
T ss_dssp CCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 45788899999887 69999999 999999999999999999986
No 85
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=96.84 E-value=0.0023 Score=54.38 Aligned_cols=41 Identities=22% Similarity=0.389 Sum_probs=37.7
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
.++.++++++.+++||++.| |.++++++.+++.|||+|.+.
T Consensus 65 ~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~ 106 (253)
T 1h5y_A 65 FIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVN 106 (253)
T ss_dssp HHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred cHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 46778999999999999998 999999999999999999975
No 86
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=96.84 E-value=0.005 Score=55.49 Aligned_cols=43 Identities=12% Similarity=0.299 Sum_probs=39.8
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+|+-++.+++..++|||+=| |.+++|+.++++.|++||+|+.
T Consensus 163 ~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al~~GA~gV~vGs 206 (326)
T 3bo9_A 163 TTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFALGAEAVQMGT 206 (326)
T ss_dssp CHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred cHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHhCCCEEEech
Confidence 588999999999999999998 9999999999999999999963
No 87
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.83 E-value=0.001 Score=58.80 Aligned_cols=84 Identities=21% Similarity=0.289 Sum_probs=56.1
Q ss_pred HHHHHHhccc--cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHH
Q 039466 115 IEEVAASCNA--AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLE 192 (263)
Q Consensus 115 ieeV~~~~~~--~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 192 (263)
|.||+++.|. +.+......++.+..+++|+.+|=|..|... |
T Consensus 55 IaE~K~asPs~g~i~~~~~p~~~A~~y~~~GA~~isvltd~~~-----------f------------------------- 98 (272)
T 3qja_A 55 IAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVVTEQRR-----------F------------------------- 98 (272)
T ss_dssp EEEEC-------------CHHHHHHHHHHTTCSEEEEECCGGG-----------H-------------------------
T ss_pred EEEEecCCCCCCccCCCCCHHHHHHHHHHcCCCEEEEecChhh-----------c-------------------------
Confidence 3455555552 3333333456677778899998877766321 0
Q ss_pred HHHHHhcCCCCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEE
Q 039466 193 AYAKETMDPSLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 193 ~~~~~~~~~~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~V 243 (263)
. + +.++|+.+|+.+++||+.|+ |.++.+...|.++|+|+|.+
T Consensus 99 ---~----G--s~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlL 141 (272)
T 3qja_A 99 ---Q----G--SLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLL 141 (272)
T ss_dssp ---H----H--HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred ---C----C--CHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEE
Confidence 0 1 23689999999999999999 78988999999999999987
No 88
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.81 E-value=0.0015 Score=57.66 Aligned_cols=42 Identities=19% Similarity=0.168 Sum_probs=37.9
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.++|+.+|+.+++||+.|+ |.++.+...|.++|||+|.+-.
T Consensus 108 s~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~ 150 (272)
T 3tsm_A 108 APEFLTAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIM 150 (272)
T ss_dssp CHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEET
T ss_pred CHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEcc
Confidence 55799999999999999999 7899999999999999998754
No 89
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=96.80 E-value=0.0091 Score=54.56 Aligned_cols=41 Identities=10% Similarity=0.273 Sum_probs=38.6
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
+|+.++++++..++|||+=| |.+++++..+++.|+|+|+|+
T Consensus 196 ~~~~l~~i~~~~~iPViaaGGI~~~~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 196 LLSLLAQVREAVDIPVVAAGGIMRGGQIAAVLAAGADAAQLG 237 (369)
T ss_dssp HHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHHhcCceEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 49999999999999999999 889999999999999999986
No 90
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.79 E-value=0.0023 Score=56.47 Aligned_cols=42 Identities=10% Similarity=0.115 Sum_probs=36.6
Q ss_pred CHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.+.+++|++.. ++|+|.-| |.+++|+..+.++|++|++|..
T Consensus 199 dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGs 243 (272)
T 3qja_A 199 DRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGE 243 (272)
T ss_dssp CTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcH
Confidence 456788888887 68988877 9999999999999999999963
No 91
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=96.77 E-value=0.0016 Score=59.70 Aligned_cols=43 Identities=26% Similarity=0.194 Sum_probs=39.1
Q ss_pred CCHHHHHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 203 LSWKDIEWLRSIT-NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 203 ~~W~dl~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+|+-+..+++.. ++|||.-| |.+++||.+++++|||+|.|..
T Consensus 263 ~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgr 307 (354)
T 4ef8_A 263 TALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGT 307 (354)
T ss_dssp HHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEECH
T ss_pred HHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhH
Confidence 5789999999986 69999998 9999999999999999999863
No 92
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=96.75 E-value=0.0023 Score=57.74 Aligned_cols=41 Identities=22% Similarity=0.174 Sum_probs=37.8
Q ss_pred CHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 204 SWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
+|+.++.+++.. ++|||.-| |.+++||.++++.|||+|.|+
T Consensus 275 ~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 275 STEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIY 318 (336)
T ss_dssp HHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEee
Confidence 567899999988 89999998 999999999999999999885
No 93
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=96.75 E-value=0.0033 Score=57.51 Aligned_cols=44 Identities=23% Similarity=0.361 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 202 SLSWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 202 ~~~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
..+|+-|.++++.. ++|||.-| |.+.+|+.+|+.+||++|.|..
T Consensus 256 ~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr 302 (352)
T 3sgz_A 256 SASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGR 302 (352)
T ss_dssp CCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESH
T ss_pred ccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 34788899998877 79999998 9999999999999999999853
No 94
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=96.73 E-value=0.003 Score=55.65 Aligned_cols=40 Identities=20% Similarity=0.278 Sum_probs=35.9
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
..+.++.+|+.+++||++=| |.++|+|+++ .|+||++|.+
T Consensus 190 ~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGS 230 (271)
T 1ujp_A 190 VKDLVRRIKARTALPVAVGFGVSGKATAAQA--AVADGVVVGS 230 (271)
T ss_dssp CHHHHHHHHTTCCSCEEEESCCCSHHHHHHH--TTSSEEEECH
T ss_pred HHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cCCCEEEECh
Confidence 45779999999999999887 9999999996 9999999975
No 95
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=96.72 E-value=0.0085 Score=49.96 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=36.1
Q ss_pred CHHHHHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 204 SWKDIEWLRSIT-NLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
+++.++++++.. ++||++=| | +++++..++++|+|+|+|.
T Consensus 146 ~~~~i~~l~~~~~~~~i~~~gGI-~~~~~~~~~~~Gad~vvvG 187 (211)
T 3f4w_A 146 PIDDLITMLKVRRKARIAVAGGI-SSQTVKDYALLGPDVVIVG 187 (211)
T ss_dssp SHHHHHHHHHHCSSCEEEEESSC-CTTTHHHHHTTCCSEEEEC
T ss_pred CHHHHHHHHHHcCCCcEEEECCC-CHHHHHHHHHcCCCEEEEC
Confidence 688999999986 89998887 8 6999999999999999986
No 96
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=96.69 E-value=0.001 Score=58.75 Aligned_cols=44 Identities=23% Similarity=0.344 Sum_probs=39.4
Q ss_pred CCCHHHHHHHHhhcCCCEEE--Ee-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 202 SLSWKDIEWLRSITNLPILI--KG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiil--KG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
..+|+-|+.+++..++|||+ .| |.|++||.++.+.|||||+|..
T Consensus 184 ~ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGr 230 (291)
T 3o07_A 184 RVPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLGCDGVFVGS 230 (291)
T ss_dssp TSCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECG
T ss_pred CCCHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEch
Confidence 45799999999999999975 55 9999999999999999999954
No 97
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=96.69 E-value=0.0093 Score=54.13 Aligned_cols=44 Identities=16% Similarity=0.215 Sum_probs=39.8
Q ss_pred CCCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEEc
Q 039466 201 PSLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~VS 244 (263)
+...|+.+++||+.+++|||.-| |.++++|+++++.| ||.|.+.
T Consensus 262 ~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 262 PGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLG 307 (340)
T ss_dssp TTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEEC
T ss_pred ccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEec
Confidence 34578899999999999999998 88999999999998 9999874
No 98
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=96.68 E-value=0.018 Score=48.43 Aligned_cols=43 Identities=16% Similarity=0.275 Sum_probs=39.0
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.++|+.++++++..++||++=| | +++++..++++|++||+|+.
T Consensus 150 ~~~~~~l~~~~~~~~~pvia~GGI-~~~nv~~~~~~Ga~gv~vgs 193 (221)
T 1yad_A 150 GRGVSLLSDIKQRISIPVIAIGGM-TPDRLRDVKQAGADGIAVMS 193 (221)
T ss_dssp -CHHHHHHHHHHHCCSCEEEESSC-CGGGHHHHHHTTCSEEEESH
T ss_pred CCCHHHHHHHHHhCCCCEEEECCC-CHHHHHHHHHcCCCEEEEhH
Confidence 5689999999998899999998 7 99999999999999999973
No 99
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=96.67 E-value=0.0092 Score=53.99 Aligned_cols=43 Identities=14% Similarity=0.108 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEEc
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~VS 244 (263)
...|+.++++|+.+++|||.-| |.+++||.++++.| ||+|.++
T Consensus 263 ~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 263 GYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIG 307 (338)
T ss_dssp TTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEEC
T ss_pred cchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEeec
Confidence 3578889999999999999999 88999999999998 9999874
No 100
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.53 E-value=0.0091 Score=56.84 Aligned_cols=120 Identities=13% Similarity=0.064 Sum_probs=73.4
Q ss_pred hHHHHHHHHHHCCCceee-cCCCCc------cHHHHHHhccc---cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcch
Q 039466 90 GEVATARAAASCNTIMVL-SFTSSC------SIEEVAASCNA---AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRR 159 (263)
Q Consensus 90 ge~a~AraA~~~gi~~~l-ss~s~~------sieeV~~~~~~---~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R 159 (263)
...+.++++.++|+-++. .+.... .++++++..|+ +..+- .+.+..+++.++|++++.|..- +..-..
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v-~t~e~a~~l~~aGaD~I~vg~g-~Gs~~~ 306 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNI-ATAEAAKALAEAGADAVKVGIG-PGSICT 306 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEE-CSHHHHHHHHHTTCSEEEECSS-CSTTCH
T ss_pred chHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeee-CcHHHHHHHHHcCCCEEEECCC-CCcCCC
Confidence 345677778888877654 111111 24455566544 12111 1234467788999999998441 110000
Q ss_pred HHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHh---hcCCCEEEEe-cCCHHHHHHHHH
Q 039466 160 EADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRS---ITNLPILIKG-VLTREDAIKAVE 235 (263)
Q Consensus 160 ~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~---~~~lPiilKG-I~s~eDA~~a~~ 235 (263)
.+.. ..-+..+|+.+.++++ ..++|||.-| |.+++|+.+|+.
T Consensus 307 t~~~----------------------------------~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~ 352 (490)
T 4avf_A 307 TRIV----------------------------------AGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMV 352 (490)
T ss_dssp HHHH----------------------------------TCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHH
T ss_pred cccc----------------------------------CCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHH
Confidence 0000 0112235666777776 4579999997 999999999999
Q ss_pred cCCCEEEEcC
Q 039466 236 VGVAGIIVSN 245 (263)
Q Consensus 236 ~G~dgI~VSN 245 (263)
+||++|+|..
T Consensus 353 ~GAd~V~vGs 362 (490)
T 4avf_A 353 AGAYCVMMGS 362 (490)
T ss_dssp HTCSEEEECT
T ss_pred cCCCeeeecH
Confidence 9999999964
No 101
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=96.52 E-value=0.011 Score=54.22 Aligned_cols=41 Identities=20% Similarity=0.076 Sum_probs=37.4
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEEc
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~VS 244 (263)
..|+.++++|+.+++|||.-| | ++++|+++++.| ||+|.|.
T Consensus 280 ~~~~~~~~i~~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 280 TPVSFKRALREAYQGVLIYAGRY-NAEKAEQAINDGLADMIGFG 322 (365)
T ss_dssp CCHHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEECC
T ss_pred ccHHHHHHHHHHCCCcEEEeCCC-CHHHHHHHHHCCCcceehhc
Confidence 468889999999999999999 7 999999999998 9999874
No 102
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.50 E-value=0.024 Score=54.02 Aligned_cols=119 Identities=15% Similarity=0.102 Sum_probs=72.4
Q ss_pred HHHHHHHHHHCCCceee-cCCCC------ccHHHHHHhccc---cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchH
Q 039466 91 EVATARAAASCNTIMVL-SFTSS------CSIEEVAASCNA---AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRRE 160 (263)
Q Consensus 91 e~a~AraA~~~gi~~~l-ss~s~------~sieeV~~~~~~---~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~ 160 (263)
....++++.++|+-.+. .+... ..+++|++..|+ +..+. .+.+..+++.++|++++.|..- +......
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v-~t~e~a~~l~~aGaD~I~Vg~g-~Gs~~~t 309 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNV-ATAEGARALIEAGVSAVKVGIG-PGSICTT 309 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEE-CSHHHHHHHHHHTCSEEEECSS-CCTTBCH
T ss_pred hHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEccc-CcHHHHHHHHHhCCCEEEECCC-CCcCccc
Confidence 35667777778866543 22111 124556666554 12111 1224467778899999997642 1110000
Q ss_pred HHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHh---hcCCCEEEEe-cCCHHHHHHHHHc
Q 039466 161 ADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRS---ITNLPILIKG-VLTREDAIKAVEV 236 (263)
Q Consensus 161 ~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~---~~~lPiilKG-I~s~eDA~~a~~~ 236 (263)
+.. ..-+..+|..+.++++ ..++|||.-| |.+++|+.+|+.+
T Consensus 310 r~~----------------------------------~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~ 355 (496)
T 4fxs_A 310 RIV----------------------------------TGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAA 355 (496)
T ss_dssp HHH----------------------------------HCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT
T ss_pred ccc----------------------------------cCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHc
Confidence 000 0112335666666665 4589999997 9999999999999
Q ss_pred CCCEEEEcC
Q 039466 237 GVAGIIVSN 245 (263)
Q Consensus 237 G~dgI~VSN 245 (263)
|||+|++..
T Consensus 356 GAd~V~iGs 364 (496)
T 4fxs_A 356 GASCVMVGS 364 (496)
T ss_dssp TCSEEEEST
T ss_pred CCCeEEecH
Confidence 999999964
No 103
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=96.48 E-value=0.01 Score=55.93 Aligned_cols=90 Identities=19% Similarity=0.280 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHH
Q 039466 129 RDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDI 208 (263)
Q Consensus 129 ~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl 208 (263)
.+...++.+.++++|+++|+++-=+. .|. ++.. + .+ ...+.++... ...+|+-+
T Consensus 310 ~ed~~~iA~~~~~aGaDgI~v~ntt~---~~~-d~~~-~-----~~---------~~GGlSG~~~-------~~~sl~~i 363 (443)
T 1tv5_A 310 QEQKKEIADVLLETNIDGMIISNTTT---QIN-DIKS-F-----EN---------KKGGVSGAKL-------KDISTKFI 363 (443)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCBS---CCC-CCGG-G-----TT---------CCSEEEEHHH-------HHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCc---ccc-cccc-c-----cc---------ccCCcCCCcc-------hHHHHHHH
Confidence 34667888999999999998864332 110 0000 0 00 0000011100 01357889
Q ss_pred HHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 209 EWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 209 ~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
+.+++.+ ++|||.-| |.|++||.+++.+|||+|.|.
T Consensus 364 ~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 364 CEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLY 402 (443)
T ss_dssp HHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEES
T ss_pred HHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 9999999 89999998 999999999999999999875
No 104
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=96.48 E-value=0.013 Score=53.58 Aligned_cols=41 Identities=20% Similarity=0.097 Sum_probs=37.5
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEEc
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~VS 244 (263)
..|+.++++|+.+++|||.-| | ++++|+++++.| ||+|.++
T Consensus 281 ~~~~~~~~v~~~~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 281 YSEAFRQKVRERFHGVIIGAGAY-TAEKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp CCHHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred ccHHHHHHHHHHCCCCEEEECCc-CHHHHHHHHHCCCccEEEEC
Confidence 468889999999999999999 6 999999999998 9999874
No 105
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.40 E-value=0.013 Score=50.28 Aligned_cols=114 Identities=19% Similarity=0.145 Sum_probs=69.2
Q ss_pred cCCChhHHHHHHHHHHCCCceeecCCCCccHHHHHH---hccc-cc---c-CHH-------HHHHHHHHHHHcCCCEEEE
Q 039466 85 LANPEGEVATARAAASCNTIMVLSFTSSCSIEEVAA---SCNA-AY---K-KRD-------MAATLVQRAERNGFMALVL 149 (263)
Q Consensus 85 l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~---~~~~-~~---~-d~~-------~~~~li~ra~~aG~~al~v 149 (263)
|.++.-...+|+++.+.|... ++.. +.++|.+ ...- ++ + |.. .+.+.++.+.++|++.+.+
T Consensus 32 l~~~~~~~~~A~a~~~~Ga~~-i~~~---~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l 107 (229)
T 3q58_A 32 MDKPEIVAAMAQAAASAGAVA-VRIE---GIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAF 107 (229)
T ss_dssp TCSHHHHHHHHHHHHHTTCSE-EEEE---SHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEE
T ss_pred CCCcchHHHHHHHHHHCCCcE-EEEC---CHHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEE
Confidence 434455558999999999755 4443 4555544 3221 11 2 210 1233467788899997764
Q ss_pred ccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEecCCHHH
Q 039466 150 TADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGVLTRED 229 (263)
Q Consensus 150 TvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI~s~eD 229 (263)
|+... .++..--+-++.+++. ++++++ ++.+.++
T Consensus 108 --~~~~~------------------------------------------~~p~~l~~~i~~~~~~-g~~v~~-~v~t~ee 141 (229)
T 3q58_A 108 --DASFR------------------------------------------SRPVDIDSLLTRIRLH-GLLAMA-DCSTVNE 141 (229)
T ss_dssp --ECCSS------------------------------------------CCSSCHHHHHHHHHHT-TCEEEE-ECSSHHH
T ss_pred --Ccccc------------------------------------------CChHHHHHHHHHHHHC-CCEEEE-ecCCHHH
Confidence 43210 0111111234555553 666665 6999999
Q ss_pred HHHHHHcCCCEEEEcCCCC
Q 039466 230 AIKAVEVGVAGIIVSNHGA 248 (263)
Q Consensus 230 A~~a~~~G~dgI~VSNHGG 248 (263)
|++|.+.|+|.|.+.+||-
T Consensus 142 a~~a~~~Gad~Ig~~~~g~ 160 (229)
T 3q58_A 142 GISCHQKGIEFIGTTLSGY 160 (229)
T ss_dssp HHHHHHTTCSEEECTTTTS
T ss_pred HHHHHhCCCCEEEecCccC
Confidence 9999999999998888873
No 106
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.39 E-value=0.034 Score=50.99 Aligned_cols=118 Identities=15% Similarity=0.099 Sum_probs=72.5
Q ss_pred HHHHHHHHHHCCCceee-c-CCCC-c-c---HHHHHHhccc---cccCHHHHHHHHHHHHHcCCCEEEEccCCCC-Ccch
Q 039466 91 EVATARAAASCNTIMVL-S-FTSS-C-S---IEEVAASCNA---AYKKRDMAATLVQRAERNGFMALVLTADTPR-LDRR 159 (263)
Q Consensus 91 e~a~AraA~~~gi~~~l-s-s~s~-~-s---ieeV~~~~~~---~~~d~~~~~~li~ra~~aG~~al~vTvD~~~-~g~R 159 (263)
....++++.++|+.++. . +... . . ++++++..|+ +..+- .+.+..++++++|+++|.+....-. .+.|
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v-~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr 187 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNV-ATAEGARALIEAGVSAVKVGIGPGSICTTR 187 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEE-CSHHHHHHHHHHTCSEEEECSSCSTTBCHH
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeee-CCHHHHHHHHHcCCCEEEEecCCCCCCCcc
Confidence 34668888889988764 2 2211 1 1 3345556544 11111 1334567778899999998543210 0111
Q ss_pred HHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHh---hcCCCEEEEe-cCCHHHHHHHHH
Q 039466 160 EADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRS---ITNLPILIKG-VLTREDAIKAVE 235 (263)
Q Consensus 160 ~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~---~~~lPiilKG-I~s~eDA~~a~~ 235 (263)
. . ...+...++.|.++++ ..++|||.=| |.+++|+.+|+.
T Consensus 188 ~----------------------------------~--~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala 231 (366)
T 4fo4_A 188 I----------------------------------V--TGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIA 231 (366)
T ss_dssp H----------------------------------H--HCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHH
T ss_pred c----------------------------------c--cCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHH
Confidence 0 0 0112234556666654 6789999998 999999999999
Q ss_pred cCCCEEEEcC
Q 039466 236 VGVAGIIVSN 245 (263)
Q Consensus 236 ~G~dgI~VSN 245 (263)
+||++|++..
T Consensus 232 ~GAd~V~vGs 241 (366)
T 4fo4_A 232 AGASCVMVGS 241 (366)
T ss_dssp TTCSEEEEST
T ss_pred cCCCEEEECh
Confidence 9999999853
No 107
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=96.39 E-value=0.006 Score=56.52 Aligned_cols=43 Identities=16% Similarity=0.339 Sum_probs=38.6
Q ss_pred CCCHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 202 SLSWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 202 ~~~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
..+|+-|.++++.. ++|||.-| |.+++|+.+|+.+|||+|.|.
T Consensus 291 ~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iG 336 (392)
T 2nzl_A 291 PATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVG 336 (392)
T ss_dssp CCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred cChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEEC
Confidence 35788899998877 59999999 999999999999999999985
No 108
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.37 E-value=0.0069 Score=57.81 Aligned_cols=122 Identities=8% Similarity=0.066 Sum_probs=76.4
Q ss_pred HHHHHHHHHHCCCceeec--CCCCc-----cHHHHHHhccc---cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchH
Q 039466 91 EVATARAAASCNTIMVLS--FTSSC-----SIEEVAASCNA---AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRRE 160 (263)
Q Consensus 91 e~a~AraA~~~gi~~~ls--s~s~~-----sieeV~~~~~~---~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~ 160 (263)
....++.+.++|+..+.= +.... -+++|++..|+ +.++- .+.+.+++++++|+++|.|+.-.- |...
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v-~t~~~a~~l~~aGad~I~vg~~~G--~~~~ 332 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNV-VTAAQAKNLIDAGVDGLRVGMGCG--SICI 332 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEE-CSHHHHHHHHHHTCSEEEECSSCS--CCBT
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEeccc-chHHHHHHHHHcCCCEEEECCCCC--cccc
Confidence 356777788899876652 22211 15556666543 21221 234557888899999999854211 1000
Q ss_pred HHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCC
Q 039466 161 ADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVA 239 (263)
Q Consensus 161 ~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~d 239 (263)
.+. .+ ..+ ......|..++.+++..++|||.-| |.+++|+.+|+.+|||
T Consensus 333 --t~~---~~--------------~~g-----------~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd 382 (514)
T 1jcn_A 333 --TQE---VM--------------ACG-----------RPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGAS 382 (514)
T ss_dssp --TBC---CC--------------SCC-----------CCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCS
T ss_pred --ccc---cc--------------CCC-----------ccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCC
Confidence 000 00 000 0001246788899999999999988 9999999999999999
Q ss_pred EEEEcC
Q 039466 240 GIIVSN 245 (263)
Q Consensus 240 gI~VSN 245 (263)
+|.++.
T Consensus 383 ~V~iG~ 388 (514)
T 1jcn_A 383 TVMMGS 388 (514)
T ss_dssp EEEEST
T ss_pred eeeECH
Confidence 999965
No 109
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.36 E-value=0.017 Score=52.83 Aligned_cols=118 Identities=14% Similarity=0.169 Sum_probs=70.9
Q ss_pred HHHHHHHHHCCCceee-cCCCCc------cHHHHHHhccc--cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHH
Q 039466 92 VATARAAASCNTIMVL-SFTSSC------SIEEVAASCNA--AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREAD 162 (263)
Q Consensus 92 ~a~AraA~~~gi~~~l-ss~s~~------sieeV~~~~~~--~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d 162 (263)
...++.+.++|+.++. .+.... .++++++..+- +..+- .+.+.+++++++|+++|.|.+..-.. ...+.
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v-~t~e~A~~l~~aGaD~I~VG~~~Gs~-~~tr~ 184 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNV-VTEEATKELIENGADGIKVGIGPGSI-CTTRI 184 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEE-CSHHHHHHHHHTTCSEEEECSSCCTT-CCHHH
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccC-CCHHHHHHHHHcCcCEEEEecCCCcC-CCccc
Confidence 6678888888887764 222212 22334444321 21221 23345677888999999985432100 00000
Q ss_pred HhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHH---hhcCCCEEEEe-cCCHHHHHHHHHcCC
Q 039466 163 IKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLR---SITNLPILIKG-VLTREDAIKAVEVGV 238 (263)
Q Consensus 163 ~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr---~~~~lPiilKG-I~s~eDA~~a~~~G~ 238 (263)
. ...+..+|+.+.+++ +..++|||.=| |.+++|+.+|+.+||
T Consensus 185 ~----------------------------------~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GA 230 (361)
T 3khj_A 185 V----------------------------------AGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGA 230 (361)
T ss_dssp H----------------------------------TCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTC
T ss_pred c----------------------------------cCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCC
Confidence 0 001122455566664 45689999997 999999999999999
Q ss_pred CEEEEcC
Q 039466 239 AGIIVSN 245 (263)
Q Consensus 239 dgI~VSN 245 (263)
|+|+|..
T Consensus 231 d~V~vGs 237 (361)
T 3khj_A 231 SSVMIGS 237 (361)
T ss_dssp SEEEEST
T ss_pred CEEEECh
Confidence 9999864
No 110
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=96.34 E-value=0.024 Score=52.61 Aligned_cols=117 Identities=15% Similarity=0.183 Sum_probs=70.7
Q ss_pred HHHHHHHHHCCCceeec-CCCCcc---HHHH---HHhccc-cc-cCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHH
Q 039466 92 VATARAAASCNTIMVLS-FTSSCS---IEEV---AASCNA-AY-KKRDMAATLVQRAERNGFMALVLTADTPRLDRREAD 162 (263)
Q Consensus 92 ~a~AraA~~~gi~~~ls-s~s~~s---ieeV---~~~~~~-~~-~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d 162 (263)
.+.++++.++|+.+++- +....+ ++.| ++..+. +. .+- .+.+..++++++|+++|++..- + |.+.
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V-~t~e~A~~a~~aGAD~I~vG~g-~--Gs~~-- 219 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNV-VTEEATKELIENGADGIKVGIG-P--GSIC-- 219 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEE-CSHHHHHHHHHTTCSEEEECC-----------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeec-CCHHHHHHHHHcCCCEEEEeCC-C--CcCc--
Confidence 56788888899888762 222223 2333 333221 21 221 2345567788999999998432 1 2110
Q ss_pred HhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhh---cCCCEEEEe-cCCHHHHHHHHHcCC
Q 039466 163 IKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSI---TNLPILIKG-VLTREDAIKAVEVGV 238 (263)
Q Consensus 163 ~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~---~~lPiilKG-I~s~eDA~~a~~~G~ 238 (263)
. . +.. ...+..+|..|.++++. .++|||.-| |.+++|+.+|+.+||
T Consensus 220 ~---t-----r~~----------------------~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGA 269 (400)
T 3ffs_A 220 T---T-----RIV----------------------AGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGA 269 (400)
T ss_dssp -----------CC----------------------SCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTC
T ss_pred c---c-----ccc----------------------cccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCC
Confidence 0 0 000 00012356667777654 689999997 999999999999999
Q ss_pred CEEEEc
Q 039466 239 AGIIVS 244 (263)
Q Consensus 239 dgI~VS 244 (263)
++|+|.
T Consensus 270 d~V~vG 275 (400)
T 3ffs_A 270 SSVMIG 275 (400)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 999984
No 111
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=96.32 E-value=0.023 Score=52.55 Aligned_cols=118 Identities=11% Similarity=0.078 Sum_probs=70.4
Q ss_pred HHHHHHHHHHCCCceee--cCCCCc--cH---HHHHHhccc--cc-cCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchH
Q 039466 91 EVATARAAASCNTIMVL--SFTSSC--SI---EEVAASCNA--AY-KKRDMAATLVQRAERNGFMALVLTADTPRLDRRE 160 (263)
Q Consensus 91 e~a~AraA~~~gi~~~l--ss~s~~--si---eeV~~~~~~--~~-~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~ 160 (263)
....++.+.+.|...+. .+.... .+ +++++..++ +. .+- .+.+.+++++++|+++|+|+... |.-.
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v-~~~~~a~~a~~~Gad~I~vg~~~---G~~~ 229 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNI-VTKEAALDLISVGADCLKVGIGP---GSIC 229 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEE-CSHHHHHHHHTTTCSEEEECSSC---STTS
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCC-CcHHHHHHHHhcCCCEEEECCCC---CcCc
Confidence 34566777778877654 122211 23 334455433 11 111 12456778889999999985432 1100
Q ss_pred HHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHh---hcCCCEEEEe-cCCHHHHHHHHHc
Q 039466 161 ADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRS---ITNLPILIKG-VLTREDAIKAVEV 236 (263)
Q Consensus 161 ~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~---~~~lPiilKG-I~s~eDA~~a~~~ 236 (263)
. . .... ..+..+|+.+.++++ ..++|||.-| |.+++|+.+++.+
T Consensus 230 ~-~-----------------------------~~~~--~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~ 277 (404)
T 1eep_A 230 T-T-----------------------------RIVA--GVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAA 277 (404)
T ss_dssp H-H-----------------------------HHHH--CCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHH
T ss_pred C-c-----------------------------cccC--CCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHc
Confidence 0 0 0000 011224666666665 5789999988 9999999999999
Q ss_pred CCCEEEEc
Q 039466 237 GVAGIIVS 244 (263)
Q Consensus 237 G~dgI~VS 244 (263)
|||+|.|.
T Consensus 278 GAd~V~iG 285 (404)
T 1eep_A 278 GADSVMIG 285 (404)
T ss_dssp TCSEEEEC
T ss_pred CCCHHhhC
Confidence 99999983
No 112
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=96.32 E-value=0.005 Score=56.79 Aligned_cols=43 Identities=19% Similarity=0.309 Sum_probs=39.5
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+|+.|.++++..+.|||.-| |.+.+|+.+++..|||++.|+.
T Consensus 265 ~~~~~l~~v~~~~~~pVia~GGI~~~~dv~kal~~GAdaV~iGr 308 (380)
T 1p4c_A 265 SPMEVLAQSVAKTGKPVLIDSGFRRGSDIVKALALGAEAVLLGR 308 (380)
T ss_dssp CGGGTHHHHHHHHCSCEEECSSCCSHHHHHHHHHTTCSCEEESH
T ss_pred CHHHHHHHHHHHcCCeEEEECCCCCHHHHHHHHHhCCcHhhehH
Confidence 478899999999899999999 9999999999999999999863
No 113
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.29 E-value=0.018 Score=49.48 Aligned_cols=117 Identities=15% Similarity=0.128 Sum_probs=69.3
Q ss_pred cCCChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc-cc---cCH--H------HHHHHHHHHHHcCCCEEEEccC
Q 039466 85 LANPEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA-AY---KKR--D------MAATLVQRAERNGFMALVLTAD 152 (263)
Q Consensus 85 l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~-~~---~d~--~------~~~~li~ra~~aG~~al~vTvD 152 (263)
|.++.-...+|+++.+.|.. +++..+..-+++|++...- ++ ++. + ...+.++.+.++|++.+.+ |
T Consensus 32 l~~~~~~~~~A~a~~~~Ga~-~i~~~~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l--~ 108 (232)
T 3igs_A 32 LDKPEIVAAMALAAEQAGAV-AVRIEGIDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAV--D 108 (232)
T ss_dssp TCSHHHHHHHHHHHHHTTCS-EEEEESHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEE--E
T ss_pred CCCcchHHHHHHHHHHCCCe-EEEECCHHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEE--C
Confidence 43344455899999999976 4554333334444444321 11 210 0 1234467788899997765 3
Q ss_pred CCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEecCCHHHHHH
Q 039466 153 TPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGVLTREDAIK 232 (263)
Q Consensus 153 ~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI~s~eDA~~ 232 (263)
+... .++..--+-++.+++. ++++++ ++.+.++|++
T Consensus 109 ~~~~------------------------------------------~~p~~l~~~i~~~~~~-g~~v~~-~v~t~eea~~ 144 (232)
T 3igs_A 109 GTAR------------------------------------------QRPVAVEALLARIHHH-HLLTMA-DCSSVDDGLA 144 (232)
T ss_dssp CCSS------------------------------------------CCSSCHHHHHHHHHHT-TCEEEE-ECCSHHHHHH
T ss_pred cccc------------------------------------------CCHHHHHHHHHHHHHC-CCEEEE-eCCCHHHHHH
Confidence 3210 0111111234555543 666665 6999999999
Q ss_pred HHHcCCCEEEEcCCCC
Q 039466 233 AVEVGVAGIIVSNHGA 248 (263)
Q Consensus 233 a~~~G~dgI~VSNHGG 248 (263)
|.+.|+|.|.+.+||-
T Consensus 145 a~~~Gad~Ig~~~~g~ 160 (232)
T 3igs_A 145 CQRLGADIIGTTMSGY 160 (232)
T ss_dssp HHHTTCSEEECTTTTS
T ss_pred HHhCCCCEEEEcCccC
Confidence 9999999998888863
No 114
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=96.26 E-value=0.0042 Score=58.03 Aligned_cols=42 Identities=26% Similarity=0.352 Sum_probs=37.6
Q ss_pred CHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+++-|+.+++.. ++|||.-| |.|++||.+++++|||+|.|..
T Consensus 331 al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgr 375 (415)
T 3i65_A 331 STKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYS 375 (415)
T ss_dssp HHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESH
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcH
Confidence 457788999988 79999999 9999999999999999999853
No 115
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=96.25 E-value=0.026 Score=51.69 Aligned_cols=120 Identities=12% Similarity=0.039 Sum_probs=73.7
Q ss_pred ChhHHHHHHHHHHCCCceeecCCC-Cc------cHHHHHHhccc---cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCc
Q 039466 88 PEGEVATARAAASCNTIMVLSFTS-SC------SIEEVAASCNA---AYKKRDMAATLVQRAERNGFMALVLTADTPRLD 157 (263)
Q Consensus 88 ~~ge~a~AraA~~~gi~~~lss~s-~~------sieeV~~~~~~---~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g 157 (263)
++.....++.+.++|+-++.-..+ .. -++.|++..++ +.++. .+.+..++++++|+++|.|+.-. |
T Consensus 98 ~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V-~T~e~A~~a~~aGaD~I~Vg~g~---G 173 (361)
T 3r2g_A 98 TENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNV-ATYAGADYLASCGADIIKAGIGG---G 173 (361)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEE-CSHHHHHHHHHTTCSEEEECCSS---S
T ss_pred CHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCc-CCHHHHHHHHHcCCCEEEEcCCC---C
Confidence 344567889999999876543211 11 24455565444 22222 13345677889999999985321 1
Q ss_pred chHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHc
Q 039466 158 RREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEV 236 (263)
Q Consensus 158 ~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~ 236 (263)
+..+.+. . ..-+...|+.|.++++... |||.=| |.+++|+.+|+.+
T Consensus 174 -~~~~tr~-----------------------------~--~g~g~p~l~aI~~~~~~~~-PVIAdGGI~~~~di~kALa~ 220 (361)
T 3r2g_A 174 -SVCSTRI-----------------------------K--TGFGVPMLTCIQDCSRADR-SIVADGGIKTSGDIVKALAF 220 (361)
T ss_dssp -SCHHHHH-----------------------------H--HCCCCCHHHHHHHHTTSSS-EEEEESCCCSHHHHHHHHHT
T ss_pred -cCccccc-----------------------------c--CCccHHHHHHHHHHHHhCC-CEEEECCCCCHHHHHHHHHc
Confidence 1111100 0 0111125666666666555 999987 9999999999999
Q ss_pred CCCEEEEc
Q 039466 237 GVAGIIVS 244 (263)
Q Consensus 237 G~dgI~VS 244 (263)
|||+|++.
T Consensus 221 GAd~V~iG 228 (361)
T 3r2g_A 221 GADFVMIG 228 (361)
T ss_dssp TCSEEEES
T ss_pred CCCEEEEC
Confidence 99999985
No 116
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=96.23 E-value=0.016 Score=53.21 Aligned_cols=43 Identities=23% Similarity=0.488 Sum_probs=39.1
Q ss_pred CCHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 203 LSWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 203 ~~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+|+.|..+++.. ++|||.-| |.+++|+.+++.+|||+|.|..
T Consensus 265 ~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr 310 (370)
T 1gox_A 265 ATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGR 310 (370)
T ss_dssp CHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECH
T ss_pred cHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecH
Confidence 4788899999988 79999999 9999999999999999999863
No 117
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=96.23 E-value=0.024 Score=54.19 Aligned_cols=119 Identities=11% Similarity=0.074 Sum_probs=70.6
Q ss_pred HHHHHHHHHHCCCceeecCCCC-------ccHHHHHHhccc---cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchH
Q 039466 91 EVATARAAASCNTIMVLSFTSS-------CSIEEVAASCNA---AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRRE 160 (263)
Q Consensus 91 e~a~AraA~~~gi~~~lss~s~-------~sieeV~~~~~~---~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~ 160 (263)
....+++..++|+-.+.=..+. .-++++++..++ +.++-. +.+..+++.++|++++.|....- ++..
T Consensus 257 ~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~-t~e~a~~~~~aGad~i~vg~g~g--si~~ 333 (511)
T 3usb_A 257 AMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVA-TAEATKALIEAGANVVKVGIGPG--SICT 333 (511)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEEC-SHHHHHHHHHHTCSEEEECSSCS--TTCC
T ss_pred hHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeec-cHHHHHHHHHhCCCEEEECCCCc--cccc
Confidence 3456677777787665432221 134555666553 222211 23446777889999999743321 1100
Q ss_pred HHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHH---HhhcCCCEEEEe-cCCHHHHHHHHHc
Q 039466 161 ADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWL---RSITNLPILIKG-VLTREDAIKAVEV 236 (263)
Q Consensus 161 ~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~l---r~~~~lPiilKG-I~s~eDA~~a~~~ 236 (263)
. +.. ..-+..++..+..+ .+..++|||.-| |.+++|+.+|+.+
T Consensus 334 ~-------------------------------~~~--~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~ 380 (511)
T 3usb_A 334 T-------------------------------RVV--AGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAA 380 (511)
T ss_dssp H-------------------------------HHH--HCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHT
T ss_pred c-------------------------------ccc--cCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHh
Confidence 0 000 01122344544444 455689999987 9999999999999
Q ss_pred CCCEEEEcC
Q 039466 237 GVAGIIVSN 245 (263)
Q Consensus 237 G~dgI~VSN 245 (263)
||++++|..
T Consensus 381 GA~~V~vGs 389 (511)
T 3usb_A 381 GAHVVMLGS 389 (511)
T ss_dssp TCSEEEEST
T ss_pred CchhheecH
Confidence 999999975
No 118
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=96.18 E-value=0.027 Score=51.20 Aligned_cols=44 Identities=18% Similarity=0.212 Sum_probs=39.6
Q ss_pred CCCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEEc
Q 039466 201 PSLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~VS 244 (263)
+...|+.++++|+.+++|||.-| |.++++|+++++.| ||.|.+.
T Consensus 273 ~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 273 PGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLLG 318 (349)
T ss_dssp TTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEES
T ss_pred ccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEEec
Confidence 34578889999999999999999 88999999999999 9999874
No 119
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=96.18 E-value=0.02 Score=52.37 Aligned_cols=43 Identities=19% Similarity=0.077 Sum_probs=38.9
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEEc
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~VS 244 (263)
...|+.+++||+.+++|||.-| |.++++|+++++.| ||.|.+.
T Consensus 281 ~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 281 AFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSVG 325 (363)
T ss_dssp TTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEECC
T ss_pred chhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEec
Confidence 4578889999999999999999 88999999999998 9999874
No 120
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=96.16 E-value=0.019 Score=47.61 Aligned_cols=45 Identities=18% Similarity=0.405 Sum_probs=39.4
Q ss_pred CCCCHHHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 201 PSLSWKDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
...+|+.++++++..++||++=|=.+++++..+.+.|++||+|+.
T Consensus 147 ~~~~~~~l~~l~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 191 (215)
T 1xi3_A 147 RVIGLEGLRKIVESVKIPVVAIGGINKDNAREVLKTGVDGIAVIS 191 (215)
T ss_dssp CCCHHHHHHHHHHHCSSCEEEESSCCTTTHHHHHTTTCSEEEESH
T ss_pred CCcCHHHHHHHHHhCCCCEEEECCcCHHHHHHHHHcCCCEEEEhH
Confidence 456899999999999999999983449999999999999999874
No 121
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=96.14 E-value=0.022 Score=51.92 Aligned_cols=42 Identities=7% Similarity=-0.013 Sum_probs=28.4
Q ss_pred cccccccCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCceee
Q 039466 60 IDISTSTLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVL 107 (263)
Q Consensus 60 ~d~st~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~l 107 (263)
.|++|+++|.++.-||++|+=.. . ......+.+..+|..+++
T Consensus 36 ~~L~~~~~Gl~~~NPv~lAaG~~-----~-~~~e~~~~~~~~G~G~v~ 77 (345)
T 3oix_A 36 VSTHTTIGSFDFDNCLMNAAGVY-----C-MTREELAAIDHSEAGSFV 77 (345)
T ss_dssp CCCCEEETTEEESCSEEECTTSS-----C-SSHHHHHHHHTSSCSBCB
T ss_pred CCcCeEECCEECCCCCEEcCCCC-----C-CCHHHHHHHHHcCCCeEE
Confidence 68999999999999999984211 1 122345566677765543
No 122
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=96.11 E-value=0.0063 Score=52.58 Aligned_cols=41 Identities=12% Similarity=0.190 Sum_probs=38.0
Q ss_pred CHHHHHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSIT-NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.+.++.+|+.+ ++|+++=| |.++|+|+++.+ |+|+|||++
T Consensus 173 ~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGS 215 (235)
T 3w01_A 173 DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVGD 215 (235)
T ss_dssp CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEECT
T ss_pred CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEECC
Confidence 678899999999 89999887 999999999988 999999986
No 123
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=96.11 E-value=0.0089 Score=52.93 Aligned_cols=45 Identities=9% Similarity=0.144 Sum_probs=40.9
Q ss_pred CCCHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcCC
Q 039466 202 SLSWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 202 ~~~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VSNH 246 (263)
..+.+.++.+++.+ ++||++=| |.|+||+++++++|||+|+|++.
T Consensus 211 ~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSA 258 (286)
T 3vk5_A 211 HVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGA 258 (286)
T ss_dssp CCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGG
T ss_pred cCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECch
Confidence 44678899999999 89999987 99999999999999999999874
No 124
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=95.99 E-value=0.0095 Score=51.22 Aligned_cols=42 Identities=14% Similarity=0.189 Sum_probs=38.3
Q ss_pred CHHHHHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcCC
Q 039466 204 SWKDIEWLRSIT-NLPILIKG-VLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 204 ~W~dl~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~dgI~VSNH 246 (263)
+.+.|+.+++.+ ++|+++=| |.++|+|+++. .|||+|+|++.
T Consensus 167 ~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa 210 (228)
T 3vzx_A 167 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGNA 210 (228)
T ss_dssp CHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECTH
T ss_pred CHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChH
Confidence 688899999999 79999988 99999999998 69999999863
No 125
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=95.97 E-value=0.025 Score=52.05 Aligned_cols=41 Identities=10% Similarity=-0.027 Sum_probs=36.8
Q ss_pred CHHHHHHHHhhcCCCEEEEecCCHHHHHHHHHcC-CCEEEEc
Q 039466 204 SWKDIEWLRSITNLPILIKGVLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G-~dgI~VS 244 (263)
.|+.++++|+.+++|||.-|=.++++|+++++.| ||+|.++
T Consensus 287 ~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~ig 328 (377)
T 2r14_A 287 PEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTADAVAFG 328 (377)
T ss_dssp CTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred hHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCceEEeec
Confidence 5788999999999999999933899999999998 9999874
No 126
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.97 E-value=0.12 Score=45.44 Aligned_cols=43 Identities=14% Similarity=0.326 Sum_probs=35.9
Q ss_pred CCHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 203 LSWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 203 ~~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+.+....|++.. +.|+|.-| |.+++|++++.++|++|++|..
T Consensus 205 ~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~ 250 (272)
T 3tsm_A 205 VNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGE 250 (272)
T ss_dssp BCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECH
T ss_pred CChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcH
Confidence 3567778888877 47877776 9999999999999999999963
No 127
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.93 E-value=0.03 Score=48.18 Aligned_cols=69 Identities=22% Similarity=0.246 Sum_probs=55.7
Q ss_pred cCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHH
Q 039466 127 KKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWK 206 (263)
Q Consensus 127 ~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 206 (263)
.|.+....+++.+.+.|++.+-||.+++. .-+
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~t~~------------------------------------------------a~e 74 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFRSDA------------------------------------------------AVE 74 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTSTT------------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCCC------------------------------------------------HHH
Confidence 46677888888888999999998888642 015
Q ss_pred HHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEE
Q 039466 207 DIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 207 dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~V 243 (263)
.|+.+++..+-.+|.-| |++.++++.|+++|++.|+.
T Consensus 75 ~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 75 AIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVS 112 (232)
T ss_dssp HHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEe
Confidence 67788888777788888 89999999999999998853
No 128
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=95.86 E-value=0.023 Score=54.38 Aligned_cols=42 Identities=21% Similarity=0.341 Sum_probs=37.2
Q ss_pred CHHHHHHHHhhc-------CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSIT-------NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~-------~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+|+.|..+++.. ++|||+-| |.+++|+.+|+.+|||+|.|..
T Consensus 384 ~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 384 PIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp HHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECH
T ss_pred hHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 577788887776 79999999 9999999999999999999863
No 129
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.84 E-value=0.0096 Score=52.88 Aligned_cols=42 Identities=14% Similarity=0.258 Sum_probs=38.9
Q ss_pred CHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+|+.++.+++.. ++|||.-| |.+++||.++++.|||+|.|..
T Consensus 228 ~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~ 272 (311)
T 1jub_A 228 ALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGT 272 (311)
T ss_dssp HHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECH
T ss_pred HHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEch
Confidence 588899999999 89999999 9999999999999999999863
No 130
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.82 E-value=0.012 Score=49.40 Aligned_cols=41 Identities=15% Similarity=0.291 Sum_probs=38.2
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
+|+.++++++..++|||.-| |.+++|+.+++++|+|+|+|.
T Consensus 163 ~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~Gad~v~vG 204 (223)
T 1y0e_A 163 DFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVG 204 (223)
T ss_dssp HHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHcCCCEEEEC
Confidence 57889999999999999998 889999999999999999985
No 131
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=95.81 E-value=0.0099 Score=52.52 Aligned_cols=41 Identities=22% Similarity=0.340 Sum_probs=37.8
Q ss_pred HHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
|+.++++++.+++|||.-| |.+++|+.++++.|||+|.|..
T Consensus 230 ~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~ 271 (311)
T 1ep3_A 230 LKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAVGT 271 (311)
T ss_dssp HHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECH
Confidence 5778999999999999998 9999999999999999999864
No 132
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=95.74 E-value=0.051 Score=46.85 Aligned_cols=135 Identities=23% Similarity=0.183 Sum_probs=80.0
Q ss_pred HHHHHHHHCCCceeecCCCCccHHHHHHh---ccc-------cccCHHHHHHHHHHHHHcCCCEEEEccCCC--------
Q 039466 93 ATARAAASCNTIMVLSFTSSCSIEEVAAS---CNA-------AYKKRDMAATLVQRAERNGFMALVLTADTP-------- 154 (263)
Q Consensus 93 a~AraA~~~gi~~~lss~s~~sieeV~~~---~~~-------~~~d~~~~~~li~ra~~aG~~al~vTvD~~-------- 154 (263)
.+.+.+++..+|..++- ...++|++.+. +.+ .++|+++..++. +.-|.+.+++.+|.-
T Consensus 66 ~i~~i~~~~~~pl~vGG-GIrs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~---~~~g~q~iv~~iD~~~~~~~~v~ 141 (243)
T 4gj1_A 66 LIEKLAKEVSVNLQVGG-GIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEIL---KEFGSEAIVLALDTILKEDYVVA 141 (243)
T ss_dssp HHHHHHHHCCSEEEEES-SCCCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHH---HHHCTTTEEEEEEEEESSSEEEC
T ss_pred HHHHHHHhcCCCeEecc-ccccHHHHHHHHHcCCCEEEEccccccCCchHHHHH---hcccCceEEEEEEEEeCCCCEEE
Confidence 45677888999999984 45788887653 222 678888766654 456888899999952
Q ss_pred CCcchHHHHhhhhhhhhhhhhhhc-----cccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhc-CCCEEEEe-cCCH
Q 039466 155 RLDRREADIKNKMIAQQLKNLEGL-----LSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSIT-NLPILIKG-VLTR 227 (263)
Q Consensus 155 ~~g~R~~d~r~~~~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~-~lPiilKG-I~s~ 227 (263)
..||++..-..-..+ .+.+... -..++...+ ....++.+-++.+++.+ ++|||.-| |-+.
T Consensus 142 ~~gw~~~~~~~~~~~--~~~~~~~g~~eil~t~Id~DG-----------t~~G~d~~l~~~l~~~~~~ipviasGGv~~~ 208 (243)
T 4gj1_A 142 VNAWQEASDKKLMEV--LDFYSNKGLKHILCTDISKDG-----------TMQGVNVRLYKLIHEIFPNICIQASGGVASL 208 (243)
T ss_dssp --------CCBHHHH--HHHHHTTTCCEEEEEETTC----------------CCCHHHHHHHHHHCTTSEEEEESCCCSH
T ss_pred ecCceecccchHHHH--HHHHhhcCCcEEEeeeecccc-----------cccCCCHHHHHHHHHhcCCCCEEEEcCCCCH
Confidence 225544221111111 0111100 000110000 01235778899999987 69999988 9999
Q ss_pred HHHHHHHHcCCCEEEEcC
Q 039466 228 EDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 228 eDA~~a~~~G~dgI~VSN 245 (263)
+|.+++ +.+++|++|+.
T Consensus 209 ~Dl~~l-~~~~~gvivg~ 225 (243)
T 4gj1_A 209 KDLENL-KGICSGVIVGK 225 (243)
T ss_dssp HHHHHT-TTTCSEEEECH
T ss_pred HHHHHH-HccCchhehHH
Confidence 999876 56799998863
No 133
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=95.68 E-value=0.014 Score=50.96 Aligned_cols=39 Identities=23% Similarity=0.389 Sum_probs=34.3
Q ss_pred HHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 206 KDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.++++|+.+++||++=+ |.+++++.. +..|+|||+|.+
T Consensus 196 ~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~gADgvIVGS 235 (262)
T 2ekc_A 196 KKVEEYRELCDKPVVVGFGVSKKEHARE-IGSFADGVVVGS 235 (262)
T ss_dssp HHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTTSSEEEECH
T ss_pred HHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcCCCEEEECH
Confidence 568899999999998855 899999999 788999999974
No 134
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=95.67 E-value=0.013 Score=50.68 Aligned_cols=41 Identities=17% Similarity=0.245 Sum_probs=38.1
Q ss_pred CHHHHHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSIT-NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.+-|+.+++.+ ++|+++=| |.++|+|+++.+ |||+|+|.+
T Consensus 169 ~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGS 211 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVGN 211 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEECT
T ss_pred hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEECh
Confidence 577899999999 99999988 999999999999 999999976
No 135
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=95.63 E-value=0.073 Score=50.34 Aligned_cols=117 Identities=11% Similarity=0.084 Sum_probs=68.6
Q ss_pred HHHHHHHHHCCCceeecCCC-Cc---c---HHHHHHhccc---cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHH
Q 039466 92 VATARAAASCNTIMVLSFTS-SC---S---IEEVAASCNA---AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREA 161 (263)
Q Consensus 92 ~a~AraA~~~gi~~~lss~s-~~---s---ieeV~~~~~~---~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~ 161 (263)
...++.+.++|+..+.-+.+ .. . +++|++..|+ +.++- .+.+..++++++|+++|.|+.-. |.-.
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~-~t~e~a~~l~~~G~d~I~v~~~~---G~~~- 313 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNV-ATPEGTEALIKAGADAVKVGVGP---GSIC- 313 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEE-CSHHHHHHHHHTTCSEEEECSSC---STTC-
T ss_pred HHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCc-CCHHHHHHHHHcCCCEEEEcCCC---Cccc-
Confidence 45777788888776553222 22 2 4445555543 11111 12333577788999999985432 2100
Q ss_pred HHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHh---hcCCCEEEEe-cCCHHHHHHHHHcC
Q 039466 162 DIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRS---ITNLPILIKG-VLTREDAIKAVEVG 237 (263)
Q Consensus 162 d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~---~~~lPiilKG-I~s~eDA~~a~~~G 237 (263)
... ... ..+..+++.+.++++ ..++|||.-| |.+++|+.+|+..|
T Consensus 314 ---~~~--------------------------~~~--~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~G 362 (494)
T 1vrd_A 314 ---TTR--------------------------VVA--GVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAG 362 (494)
T ss_dssp ---HHH--------------------------HHH--CCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTT
T ss_pred ---ccc--------------------------ccC--CCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcC
Confidence 000 000 001123444444444 3689999988 99999999999999
Q ss_pred CCEEEEc
Q 039466 238 VAGIIVS 244 (263)
Q Consensus 238 ~dgI~VS 244 (263)
||+|.++
T Consensus 363 Ad~V~iG 369 (494)
T 1vrd_A 363 AESVMVG 369 (494)
T ss_dssp CSEEEES
T ss_pred CCEEEEC
Confidence 9999974
No 136
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=95.60 E-value=0.011 Score=52.63 Aligned_cols=42 Identities=17% Similarity=0.199 Sum_probs=38.9
Q ss_pred CHHHHHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSIT-NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+|+.++++++.. ++|||.-| |.+++||.++++.|||+|.|+.
T Consensus 231 ~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~ 274 (314)
T 2e6f_A 231 ALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVGT 274 (314)
T ss_dssp HHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEECH
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEch
Confidence 588999999999 99999999 9999999999999999999853
No 137
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=95.49 E-value=0.066 Score=45.57 Aligned_cols=68 Identities=22% Similarity=0.211 Sum_probs=56.5
Q ss_pred cCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHH
Q 039466 127 KKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWK 206 (263)
Q Consensus 127 ~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 206 (263)
.|.+....+.+.+.+.|++.+=||..+|. --+
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~t~~------------------------------------------------a~~ 53 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLRTEA------------------------------------------------GLA 53 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETTSTT------------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcc------------------------------------------------HHH
Confidence 46677788888888999999999888652 015
Q ss_pred HHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEE
Q 039466 207 DIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGII 242 (263)
Q Consensus 207 dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~ 242 (263)
.|+.|++..+-++|.=| |+++++++.|+++|++-|+
T Consensus 54 ~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 54 AISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIV 90 (217)
T ss_dssp HHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEE
Confidence 68889998888899888 8999999999999999664
No 138
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=95.46 E-value=0.013 Score=50.55 Aligned_cols=41 Identities=20% Similarity=0.238 Sum_probs=38.2
Q ss_pred CHHHHHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSIT-NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.+-++.+++.+ ++|+++=| |.++|+|+++.+ |||+|+|.+
T Consensus 177 ~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGS 219 (234)
T 2f6u_A 177 NPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVGN 219 (234)
T ss_dssp CHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEECH
T ss_pred hHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEECh
Confidence 678899999999 99999988 999999999999 999999975
No 139
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=95.34 E-value=0.1 Score=47.86 Aligned_cols=43 Identities=19% Similarity=0.337 Sum_probs=35.8
Q ss_pred CHHHHHHHHhh-------cC---CCEEEEe-cCCHHHHHHHHHcCCCEEEEcCC
Q 039466 204 SWKDIEWLRSI-------TN---LPILIKG-VLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 204 ~W~dl~~lr~~-------~~---lPiilKG-I~s~eDA~~a~~~G~dgI~VSNH 246 (263)
+++.|.++++. .+ +|||.-| |.+.+|+.+|+.+|||+|.|..-
T Consensus 255 ~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V~iG~~ 308 (393)
T 2qr6_A 255 MATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADAVVLGSP 308 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEEEECGG
T ss_pred hHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 56666666655 44 9999998 99999999999999999999754
No 140
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.29 E-value=0.024 Score=48.04 Aligned_cols=43 Identities=30% Similarity=0.439 Sum_probs=38.9
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
..+|+.++++++. ++||+.=| |.+++|+..++++|||+|+|+.
T Consensus 173 ~~~~~~i~~~~~~-~ipvia~GGI~s~~~~~~~~~~Gad~v~vGs 216 (234)
T 1yxy_A 173 GPDVALIEALCKA-GIAVIAEGKIHSPEEAKKINDLGVAGIVVGG 216 (234)
T ss_dssp SCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHTTCCSEEEECH
T ss_pred CCCHHHHHHHHhC-CCCEEEECCCCCHHHHHHHHHCCCCEEEEch
Confidence 3478899999998 99999998 9999999999999999999864
No 141
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=94.99 E-value=0.042 Score=50.51 Aligned_cols=41 Identities=15% Similarity=0.128 Sum_probs=36.1
Q ss_pred CHHHHHHHHhhcCCCEEEEecCCHHHHHHHHHcC-CCEEEEc
Q 039466 204 SWKDIEWLRSITNLPILIKGVLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G-~dgI~VS 244 (263)
.|+.++.+|+.+++|||.-|=.++++|+++++.| ||+|.++
T Consensus 289 ~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g~aD~V~~g 330 (376)
T 1icp_A 289 CTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAYG 330 (376)
T ss_dssp CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred cHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHCCCCcEEeec
Confidence 5677899999999999999933999999999987 9999874
No 142
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=94.94 E-value=0.32 Score=41.35 Aligned_cols=108 Identities=15% Similarity=0.122 Sum_probs=67.9
Q ss_pred cCCChhHHHHHHHHHHCCCceeecCCCC-c---cHHHHHHhccc-------cccCHHHHHHHHHHHHHcCCCEEEEccCC
Q 039466 85 LANPEGEVATARAAASCNTIMVLSFTSS-C---SIEEVAASCNA-------AYKKRDMAATLVQRAERNGFMALVLTADT 153 (263)
Q Consensus 85 l~~~~ge~a~AraA~~~gi~~~lss~s~-~---sieeV~~~~~~-------~~~d~~~~~~li~ra~~aG~~al~vTvD~ 153 (263)
..+++--..+|+++.+.|+..+==++.+ . .|+.+++..|+ ++ + .+.+++|.++|++-++-
T Consensus 21 ~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVl-t----~~~a~~ai~AGA~fivs---- 91 (217)
T 3lab_A 21 IDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVC-T----ADDFQKAIDAGAQFIVS---- 91 (217)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCC-S----HHHHHHHHHHTCSEEEE----
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeecccc-C----HHHHHHHHHcCCCEEEe----
Confidence 3345666699999999999866434332 2 45556666554 33 3 34577778889887763
Q ss_pred CCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEecCCHHHHHHH
Q 039466 154 PRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGVLTREDAIKA 233 (263)
Q Consensus 154 ~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI~s~eDA~~a 233 (263)
|. ..+ ++ .++ -.-..+-.+|.+|++- |++|++++..|
T Consensus 92 P~--~~~-ev----------------------------i~~-----------~~~~~v~~~~~~~~~P-G~~TptE~~~A 128 (217)
T 3lab_A 92 PG--LTP-EL----------------------------IEK-----------AKQVKLDGQWQGVFLP-GVATASEVMIA 128 (217)
T ss_dssp SS--CCH-HH----------------------------HHH-----------HHHHHHHCSCCCEEEE-EECSHHHHHHH
T ss_pred CC--CcH-HH----------------------------HHH-----------HHHcCCCccCCCeEeC-CCCCHHHHHHH
Confidence 21 000 00 000 0001133468888887 99999999999
Q ss_pred HHcCCCEEEEc
Q 039466 234 VEVGVAGIIVS 244 (263)
Q Consensus 234 ~~~G~dgI~VS 244 (263)
.++|+|.|=+-
T Consensus 129 ~~~Gad~vK~F 139 (217)
T 3lab_A 129 AQAGITQLKCF 139 (217)
T ss_dssp HHTTCCEEEET
T ss_pred HHcCCCEEEEC
Confidence 99999998663
No 143
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=94.91 E-value=0.064 Score=46.33 Aligned_cols=44 Identities=11% Similarity=0.208 Sum_probs=37.9
Q ss_pred CCCCHHHHHHHHhh--cCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 201 PSLSWKDIEWLRSI--TNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 201 ~~~~W~dl~~lr~~--~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+..+|+.++|+++. .++|+|.=| | +++++..+.++|++||.|..
T Consensus 174 ~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~s 220 (243)
T 3o63_A 174 AAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVR 220 (243)
T ss_dssp -CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESH
T ss_pred chhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeH
Confidence 35689999999987 589999998 6 99999999999999999853
No 144
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=94.90 E-value=0.029 Score=50.46 Aligned_cols=43 Identities=28% Similarity=0.419 Sum_probs=39.3
Q ss_pred CCHHHHHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 203 LSWKDIEWLRSIT-NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 203 ~~W~dl~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+|+-|.++++.. ++|||.-| |.+++|+.+++..|||+|.|+.
T Consensus 242 ~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~~GAd~V~igr 286 (332)
T 1vcf_A 242 PTARAILEVREVLPHLPLVASGGVYTGTDGAKALALGADLLAVAR 286 (332)
T ss_dssp BHHHHHHHHHHHCSSSCEEEESSCCSHHHHHHHHHHTCSEEEECG
T ss_pred cHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHhCCChHhhhH
Confidence 4688899999988 79999999 9999999999999999999864
No 145
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=94.89 E-value=0.036 Score=50.37 Aligned_cols=43 Identities=16% Similarity=0.097 Sum_probs=38.9
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEEc
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~VS 244 (263)
...|+.++++|+.+++|||.-| |.++++|+++++.| ||.|.+.
T Consensus 263 ~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 263 GYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVALG 307 (343)
T ss_dssp TTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEES
T ss_pred ceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHHH
Confidence 3578889999999999999999 88999999999998 9999874
No 146
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=94.85 E-value=0.036 Score=48.00 Aligned_cols=41 Identities=20% Similarity=0.311 Sum_probs=37.1
Q ss_pred HHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+.++++++.+++||++=| |.+++++..+.++|+|+|+|.+
T Consensus 190 ~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGS 231 (262)
T 1rd5_A 190 ESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGS 231 (262)
T ss_dssp HHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcCCCEEEECh
Confidence 4578999999999999977 8899999999999999999975
No 147
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=94.84 E-value=0.11 Score=46.26 Aligned_cols=39 Identities=21% Similarity=0.104 Sum_probs=35.8
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEE
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGI 241 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI 241 (263)
-+.++|+.+++..++||+.|+ |.+.++++.+.++|||+|
T Consensus 65 ~~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~aaGAD~I 104 (297)
T 4adt_A 65 VDPLKIEEIRKCISINVLAKVRIGHFVEAQILEELKVDML 104 (297)
T ss_dssp CCHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHhcCCCEEEeccCCcHHHHHHHHHcCCCEE
Confidence 367899999999999999994 888999999999999999
No 148
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=94.79 E-value=0.11 Score=47.79 Aligned_cols=38 Identities=16% Similarity=0.178 Sum_probs=34.8
Q ss_pred HHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEEc
Q 039466 205 WKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~VS 244 (263)
++ +++||+.+++|||.-| | ++++|+.+++.| ||.|.++
T Consensus 297 ~~-~~~ir~~~~iPvi~~G~i-t~~~a~~~l~~g~aD~V~ig 336 (379)
T 3aty_A 297 DV-VAWVRGSYSGVKISNLRY-DFEEADQQIREGKVDAVAFG 336 (379)
T ss_dssp CH-HHHHHTTCCSCEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred HH-HHHHHHHCCCcEEEECCC-CHHHHHHHHHcCCCeEEEec
Confidence 46 9999999999999999 6 999999999988 9999874
No 149
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=94.78 E-value=0.33 Score=41.66 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=29.2
Q ss_pred HHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEE
Q 039466 206 KDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~V 243 (263)
+-+++.++ .++|++. |++|+.++.+|.++|+|.|=+
T Consensus 118 ~vi~~~~~-~gi~~ip-Gv~TptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 118 NTVRACQE-IGIDIVP-GVNNPSTVEAALEMGLTTLKF 153 (232)
T ss_dssp HHHHHHHH-HTCEEEC-EECSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHH-cCCCEEc-CCCCHHHHHHHHHcCCCEEEE
Confidence 44555444 4888877 999999999999999999876
No 150
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=94.75 E-value=0.023 Score=50.13 Aligned_cols=44 Identities=23% Similarity=0.567 Sum_probs=38.8
Q ss_pred CCCHHHHHHHHhhcCCCEE--EEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 202 SLSWKDIEWLRSITNLPIL--IKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPii--lKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
..+|+.++++++..++|++ +=| |.+++|+.++.++|||+++|..
T Consensus 193 ~~~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGs 239 (297)
T 2zbt_A 193 GAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVGS 239 (297)
T ss_dssp TCCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECG
T ss_pred hhhHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEch
Confidence 4578999999999999987 555 9999999999999999999864
No 151
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=94.57 E-value=0.083 Score=54.53 Aligned_cols=41 Identities=17% Similarity=0.348 Sum_probs=37.4
Q ss_pred HHHHHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSIT-NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
++-+..+++.. ++|||.-| |.|++||.+++.+|+|+|+|..
T Consensus 775 ~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 775 LRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp HHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEEEEee
Confidence 46788999988 89999999 9999999999999999999964
No 152
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=94.56 E-value=0.06 Score=47.73 Aligned_cols=144 Identities=15% Similarity=0.281 Sum_probs=81.6
Q ss_pred HHHHHHCCCceeecCCCCccHHHHHHhcc-c------------cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHH
Q 039466 95 ARAAASCNTIMVLSFTSSCSIEEVAASCN-A------------AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREA 161 (263)
Q Consensus 95 AraA~~~gi~~~lss~s~~sieeV~~~~~-~------------~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~ 161 (263)
..+|++.++|.+|-.-=..++|.|.++-. | +-.|-+.+++++++|.+.|+. |-.-.-..|--|.
T Consensus 67 ~~~a~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvs---VEaElG~vgg~ed 143 (286)
T 1gvf_A 67 SAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCS---VEAELGRLGGVED 143 (286)
T ss_dssp HHHHHHTTSCBEEEEEEECCHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCE---EEEEESCCC----
T ss_pred HHHHHhCCCcEEEEcCCCCCHHHHHHHHHcCCCeEEECCCCCCHHHHHHHHHHHHHHHHHcCCE---EEEEEeeccCccc
Confidence 33466688998886554457787766532 2 223556788889998888732 2222222233232
Q ss_pred HHhh-----hhhhh-hhhhhh-hccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEec--CCHHHHHH
Q 039466 162 DIKN-----KMIAQ-QLKNLE-GLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGV--LTREDAIK 232 (263)
Q Consensus 162 d~r~-----~~~~p-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI--~s~eDA~~ 232 (263)
+..+ .|+-| ....+. ......+.-..++.++.|. ..+.++++-|+.|++.+++|+|+=|= .+.|+.++
T Consensus 144 ~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~---~~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ 220 (286)
T 1gvf_A 144 DMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYS---KTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRR 220 (286)
T ss_dssp -------CCSSCCHHHHHHHHHHHCCSEEEECSSCCSSCCS---SCCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHHHH
T ss_pred CcccccccccCCCHHHHHHHHHHHCCCEEEeecCccccCcC---CCCccCHHHHHHHHHhcCCCEEEECCCCCCHHHHHH
Confidence 2211 12333 111111 0000001111122222222 35789999999999999999999996 68899999
Q ss_pred HHHcCCCEEEEc
Q 039466 233 AVEVGVAGIIVS 244 (263)
Q Consensus 233 a~~~G~dgI~VS 244 (263)
|+++|+.=|=|.
T Consensus 221 ai~~Gv~KiNi~ 232 (286)
T 1gvf_A 221 TIELGVTKVNVA 232 (286)
T ss_dssp HHHTTEEEEEEC
T ss_pred HHHCCCeEEEEC
Confidence 999998766543
No 153
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=94.51 E-value=0.033 Score=49.65 Aligned_cols=44 Identities=25% Similarity=0.451 Sum_probs=38.8
Q ss_pred CCCHHHHHHHHhhcCCCEE---EEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 202 SLSWKDIEWLRSITNLPIL---IKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPii---lKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
..+|+.++++++..++|+| .=||.+++|+.++.++|||||+|..
T Consensus 193 ~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGs 239 (297)
T 4adt_A 193 RAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLGMDGVFVGS 239 (297)
T ss_dssp TCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTTCSCEEESH
T ss_pred CCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhH
Confidence 3579999999999999997 4559999999999999999999863
No 154
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=94.31 E-value=0.059 Score=49.99 Aligned_cols=40 Identities=25% Similarity=0.216 Sum_probs=36.2
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEEc
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~VS 244 (263)
.|+.++++|+.+++|||+-| | ++++|+++++.| ||+|.++
T Consensus 307 ~~~~~~~vk~~~~iPvi~~G~i-~~~~a~~~l~~g~aD~V~ig 348 (402)
T 2hsa_B 307 EARLMRTLRNAYQGTFICSGGY-TRELGIEAVAQGDADLVSYG 348 (402)
T ss_dssp HHHHHHHHHHHCSSCEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred hHHHHHHHHHHCCCCEEEeCCC-CHHHHHHHHHCCCCceeeec
Confidence 36778999999999999999 6 999999999987 9999874
No 155
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=94.25 E-value=0.17 Score=42.07 Aligned_cols=70 Identities=21% Similarity=0.177 Sum_probs=52.5
Q ss_pred cCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHH
Q 039466 127 KKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWK 206 (263)
Q Consensus 127 ~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 206 (263)
.|.+...+.++++.++|++.|-++...+. ..+
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~~~------------------------------------------------~~~ 47 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNSPQ------------------------------------------------WEQ 47 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTSTT------------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCChh------------------------------------------------HHH
Confidence 45666778888888999998877544210 014
Q ss_pred HHHHHHhhcCCCEEEE--ecCCHHHHHHHHHcCCCEEEEc
Q 039466 207 DIEWLRSITNLPILIK--GVLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 207 dl~~lr~~~~lPiilK--GI~s~eDA~~a~~~G~dgI~VS 244 (263)
.|+.+++.++.|+++. ++.+.+++..|+++|+|+|.+.
T Consensus 48 ~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~ 87 (212)
T 2v82_A 48 SIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTP 87 (212)
T ss_dssp HHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEeC
Confidence 5667777788898884 3789999999999999999643
No 156
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=94.24 E-value=0.18 Score=45.73 Aligned_cols=34 Identities=18% Similarity=0.148 Sum_probs=30.1
Q ss_pred HhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 212 RSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 212 r~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+..++|||.=| |.++.|+.+|+.+||++|.|..
T Consensus 219 ~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 219 AHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp HHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred HhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccH
Confidence 444689999988 9999999999999999999865
No 157
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=94.24 E-value=0.061 Score=45.83 Aligned_cols=42 Identities=17% Similarity=0.325 Sum_probs=37.7
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
..+.++++++.+++||++=| |.+++++.++++.|+|+++|.+
T Consensus 179 ~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~Gad~vivGs 221 (248)
T 1geq_A 179 AYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGS 221 (248)
T ss_dssp HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcCCCEEEEcH
Confidence 35678999999999999988 9999999999999999999874
No 158
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=94.23 E-value=0.28 Score=40.28 Aligned_cols=43 Identities=23% Similarity=0.395 Sum_probs=38.8
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.|+.|..+++..++|||.=| +-+++|..++.+.|++|++|..
T Consensus 161 ~~~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~ 204 (237)
T 3cwo_X 161 YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAAS 204 (237)
T ss_dssp CCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEESH
T ss_pred ccHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCcHHHhhhH
Confidence 358899999999999999876 8899999999999999999875
No 159
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=94.20 E-value=0.27 Score=42.38 Aligned_cols=42 Identities=24% Similarity=0.310 Sum_probs=35.9
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cC--CHHH----HHHHHHcCCCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VL--TRED----AIKAVEVGVAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~--s~eD----A~~a~~~G~dgI~V 243 (263)
..+|+.++++++..++||+.=| |- +.+| +..+.++|++||.|
T Consensus 188 ~~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 188 TGDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp CSSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred CCCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 3689999999999999999999 76 4888 55566899999988
No 160
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=94.18 E-value=0.21 Score=48.87 Aligned_cols=41 Identities=12% Similarity=0.075 Sum_probs=37.2
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEEc
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~VS 244 (263)
.|+.++++|+.+++|||.-| |.++++|+++++.| +|+|.++
T Consensus 268 ~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~g 310 (671)
T 1ps9_A 268 FSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMA 310 (671)
T ss_dssp THHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 46778999999999999998 78999999999998 9999874
No 161
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=94.18 E-value=0.03 Score=49.76 Aligned_cols=45 Identities=22% Similarity=0.398 Sum_probs=39.4
Q ss_pred CCCCHHHHHHHHhhcCCCEE--EEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 201 PSLSWKDIEWLRSITNLPIL--IKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~~lPii--lKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
...+|+.++++++..++||+ .-| |.+++|+.++.++|+|||+|..
T Consensus 192 ~~~~~~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGs 239 (305)
T 2nv1_A 192 LGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGS 239 (305)
T ss_dssp HTCCHHHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECG
T ss_pred ccccHHHHHHHHHhcCCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcH
Confidence 34689999999999999998 555 9999999999999999999864
No 162
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=94.11 E-value=0.041 Score=49.66 Aligned_cols=41 Identities=24% Similarity=0.486 Sum_probs=35.5
Q ss_pred HHHHHHHHhhcCCCEE--EEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSITNLPIL--IKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~~lPii--lKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
++-|+++++..++||| .-| |.+++||.++.++|||||.|..
T Consensus 229 lell~~i~~~~~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGs 272 (330)
T 2yzr_A 229 YEVLLEVKKLGRLPVVNFAAGGVATPADAALMMQLGSDGVFVGS 272 (330)
T ss_dssp HHHHHHHHHHTSCSSEEEECSCCCSHHHHHHHHHTTCSCEEESH
T ss_pred HHHHHHHHHhCCCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHH
Confidence 4778999998899995 454 9999999999999999999863
No 163
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=94.06 E-value=0.14 Score=47.78 Aligned_cols=81 Identities=14% Similarity=0.132 Sum_probs=57.2
Q ss_pred CHHHHHHHHHHHHH-cCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHH
Q 039466 128 KRDMAATLVQRAER-NGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWK 206 (263)
Q Consensus 128 d~~~~~~li~ra~~-aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 206 (263)
+.+...+++++.++ +|++.|-|+.-... . ..+.. ....+...|+
T Consensus 262 ~~ed~~~la~~L~~~~Gvd~I~vs~g~~~-------~-~~~~~---------------------------~~~g~~~~~~ 306 (419)
T 3l5a_A 262 TIDEFNQLIDWVMDVSNIQYLAIASWGRH-------I-YQNTS---------------------------RTPGDHFGRP 306 (419)
T ss_dssp CHHHHHHHHHHHHHHSCCCCEEECCTTCC-------G-GGCBC---------------------------CCSSTTTTSB
T ss_pred CHHHHHHHHHHHHhhcCCcEEEEeeCCcc-------c-ccccc---------------------------CCCCccccHH
Confidence 35667788899888 99888777642110 0 00000 0001224678
Q ss_pred HHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 207 DIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 207 dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
.+++||+.+ ++|||+-| |.++++|+++++. ||.|.++
T Consensus 307 ~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiG 346 (419)
T 3l5a_A 307 VNQIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGMS 346 (419)
T ss_dssp HHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEES
T ss_pred HHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHHH
Confidence 899999998 58999998 8999999999999 9999874
No 164
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=94.05 E-value=0.077 Score=46.15 Aligned_cols=40 Identities=25% Similarity=0.272 Sum_probs=35.0
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEE
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~V 243 (263)
+.+||..+|+.+++||+-|- |.++-....|..+|||+|.+
T Consensus 89 s~~dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilL 129 (251)
T 1i4n_A 89 DPAFVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILI 129 (251)
T ss_dssp CTHHHHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEE
Confidence 45899999999999999999 66777788899999999865
No 165
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=94.00 E-value=0.15 Score=43.35 Aligned_cols=41 Identities=22% Similarity=0.302 Sum_probs=35.9
Q ss_pred HHHHHHHHhhcCCCEEEEecCCH-------HHHHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSITNLPILIKGVLTR-------EDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKGI~s~-------eDA~~a~~~G~dgI~VSN 245 (263)
.+.++.+|+.+++||++.+..++ ++++.+.++|+|+|++.+
T Consensus 69 ~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~ 116 (248)
T 1geq_A 69 FWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVD 116 (248)
T ss_dssp HHHHHHHHTTCCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETT
T ss_pred HHHHHHHHhhCCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECC
Confidence 57899999999999999885564 899999999999999964
No 166
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=93.97 E-value=0.046 Score=45.79 Aligned_cols=45 Identities=22% Similarity=0.282 Sum_probs=39.2
Q ss_pred CCCCHHHHHHHHhhcC-CCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 201 PSLSWKDIEWLRSITN-LPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~~-lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
..++|+.++++++..+ +||++=|=.+++++..+.++|++||+|+.
T Consensus 156 ~~~~~~~l~~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 201 (227)
T 2tps_A 156 AVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMIS 201 (227)
T ss_dssp CCCTTHHHHHHHHTTCCCCEEEESSCCTTTSHHHHHTTCSEEEESH
T ss_pred CccCHHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHcCCCEEEEhH
Confidence 3468999999999988 99999884449999999999999999974
No 167
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=93.94 E-value=0.19 Score=57.40 Aligned_cols=182 Identities=18% Similarity=0.235 Sum_probs=102.7
Q ss_pred ceeccccccc-cc--cccc-cccCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCceeecCCCCccHHH------
Q 039466 48 TFWPRILVDV-CR--IDIS-TSTLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLSFTSSCSIEE------ 117 (263)
Q Consensus 48 ~l~pr~L~~v-~~--~d~s-t~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~siee------ 117 (263)
.|.|+..+.- .. .++. +++|| ..||+.+||+...- .-.+|.|..++|-.-.|+...-.+.++
T Consensus 402 ~f~P~l~~~~~g~~~~~t~~~~~lg---~~PIi~a~M~~~~s-----~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~ 473 (3089)
T 3zen_D 402 SYAPTVVKLPDGSVKLETKFTRLTG---RSPILLAGMTPTTV-----DAKIVAAAANAGHWAELAGGGQVTEQIFNDRIA 473 (3089)
T ss_dssp GGCCEEEECTTCCEEEECHHHHHHS---SCSEEECCCHHHHT-----SHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHH
T ss_pred ccCCcccccCCCcccccchhhhhcC---CCCEEeCCCcCCcC-----CHHHHHHHHhCCCceeecCCCCCCHHHHHHHHH
Confidence 3677776532 22 3333 45888 78999999985321 235888888888777775544434443
Q ss_pred -HHHhcc-c-------cccCHHH------HHHHHHHHHHcC--CCEEEEccCCCCC--------cchHHHHhhhh-hhhh
Q 039466 118 -VAASCN-A-------AYKKRDM------AATLVQRAERNG--FMALVLTADTPRL--------DRREADIKNKM-IAQQ 171 (263)
Q Consensus 118 -V~~~~~-~-------~~~d~~~------~~~li~ra~~aG--~~al~vTvD~~~~--------g~R~~d~r~~~-~~p~ 171 (263)
+++..+ + ++.++.. ..++++.+.++| ++.++++.+.|.. -.++..+..-+ ..++
T Consensus 474 ~~r~~~~~~~p~~vNl~~~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~~ee~~~~i~~l~~~Gi~~i~~~~~t 553 (3089)
T 3zen_D 474 ELETLLEPGRAIQFNTLFLDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPDLEEAVDIIDELNEVGISHVVFKPGT 553 (3089)
T ss_dssp HHHHHSCTTCCCEEEEECSCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCCHHHHHHHHTSTTHHHHCSEEECCCS
T ss_pred HHHHhcCCCCceeechhhcChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCchhHhHHHHHHHHHcCCEEEEEeCCC
Confidence 333332 2 3456543 147889999999 6679998888731 11111111000 0011
Q ss_pred hhh---hhhccc--cC----C--CCCCCccHHHHHHHhcCCCCCHH-HH----HHHHhhcCCCEEEEe-cCCHHHHHHHH
Q 039466 172 LKN---LEGLLS--TK----V--TSDTGSNLEAYAKETMDPSLSWK-DI----EWLRSITNLPILIKG-VLTREDAIKAV 234 (263)
Q Consensus 172 ~~~---~~~~~~--~~----~--~~~~~~~~~~~~~~~~~~~~~W~-dl----~~lr~~~~lPiilKG-I~s~eDA~~a~ 234 (263)
.+. +..+.. +. + +.....++ ....+-. -| ..||+..++|||+=| |.+++++..++
T Consensus 554 ~~~a~~~~~i~~d~~~~~y~vv~~G~eaGGH--------~g~~~~~~ll~~~~~~ir~~~~iPViaaGGI~d~~~vaaal 625 (3089)
T 3zen_D 554 VEQIRSVIRIAAEVPTKPVIVHIEGGRAGGH--------HSWEDLDDLLLATYSELRSRSNITICVGGGIGTPERSAEYL 625 (3089)
T ss_dssp HHHHHHHHHHHTTSTTSCEEEEECCSSSSEE--------CCSCCHHHHHHHHHHHHTTCTTEEEEEESSCCCTTTTHHHH
T ss_pred HHHHHHHHHhhhhcCCCcEEEEEeCCCcCCC--------CCcccHHHHHHHHHHHHhhcCCCeEEEEeCCCCHHHHHHHh
Confidence 110 000000 00 0 00000000 0111222 24 778888999999988 99999999999
Q ss_pred -----------HcCCCEEEEcC
Q 039466 235 -----------EVGVAGIIVSN 245 (263)
Q Consensus 235 -----------~~G~dgI~VSN 245 (263)
..|+|||+|..
T Consensus 626 ~g~ws~~~~~p~lGAdGV~vGT 647 (3089)
T 3zen_D 626 SGRWAEVHGYPLMPIDGILVGT 647 (3089)
T ss_dssp HTGGGGTTTCCCCCCSEEECSS
T ss_pred ccccccccCccCCCCCEEEecH
Confidence 99999999864
No 168
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=93.94 E-value=0.23 Score=43.85 Aligned_cols=74 Identities=19% Similarity=0.107 Sum_probs=57.1
Q ss_pred HHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCC-CCHHHHHHHH
Q 039466 134 TLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPS-LSWKDIEWLR 212 (263)
Q Consensus 134 ~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~W~dl~~lr 212 (263)
+..+-||++|+.++.+-+-.|. |+|. .. +-.. -+-++|+.|+
T Consensus 22 eqa~iae~aGa~av~~l~~~p~------d~r~---------~g----------------------Gv~Rm~dp~~I~~I~ 64 (291)
T 3o07_A 22 EQAKIAEKSGACAVMALESIPA------DMRK---------SG----------------------KVCRMSDPKMIKDIM 64 (291)
T ss_dssp HHHHHHHHHTCSEEEECSSCHH------HHHT---------TT----------------------CCCCCCCHHHHHHHH
T ss_pred HHHHHHHHhCchhhhhccCCCc------hhhh---------cC----------------------CccccCCHHHHHHHH
Confidence 4567788999999998777642 3331 00 0111 2568999999
Q ss_pred hhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 213 SITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 213 ~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
+..++||+.|= |-+-.+|+.+.++|||.|+=|
T Consensus 65 ~aVsIPVm~k~righ~~EAqilea~GaD~IDes 97 (291)
T 3o07_A 65 NSVSIPVMAKVRIGHFVEAQIIEALEVDYIDES 97 (291)
T ss_dssp TTCSSCEEEEEETTCHHHHHHHHHTTCSEEEEE
T ss_pred HhCCCCeEEEEecCcHHHHHHHHHcCCCEEecc
Confidence 99999999998 889999999999999999877
No 169
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=93.67 E-value=0.11 Score=57.05 Aligned_cols=53 Identities=6% Similarity=0.170 Sum_probs=33.7
Q ss_pred eecccccccc-c--cccc-cccCCcccccceeecccCCcccCCChhHHHHHHHHHHCCCceeecC
Q 039466 49 FWPRILVDVC-R--IDIS-TSTLDYKISASIIIAPTGLHKLANPEGEVATARAAASCNTIMVLSF 109 (263)
Q Consensus 49 l~pr~L~~v~-~--~d~s-t~~lG~~~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~~~lss 109 (263)
|.||..+--+ . .+|. |++||+ .||+.+||+.. -..-.+|.|+.++|-.-+|..
T Consensus 565 f~PrLv~~~~g~~~~~t~~t~llg~---~PIi~~gM~~~-----~~~~~lvaAvsnAGglg~l~~ 621 (2051)
T 2uv8_G 565 YHPKLIKNKSGKIFVETKFSKLIGR---PPLLVPGMTPC-----TVSPDFVAATTNAGYTIELAG 621 (2051)
T ss_dssp TCCEEEECSSCCEEEECHHHHHHSS---CSEEECCCHHH-----HTCHHHHHHHHHTTCEEEEEG
T ss_pred cCCccccCCCCchhHHHHHHHhhCc---cceecCCCccc-----cccHHHHHHHHcCCcEEEEcc
Confidence 5677765221 1 2343 458993 69999999731 123457888888887666633
No 170
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=93.63 E-value=0.21 Score=55.07 Aligned_cols=131 Identities=12% Similarity=0.036 Sum_probs=81.5
Q ss_pred ccceeecccCCcccCCChh---HHHHHHHHHHCCCce--eecCCCCccHHHHHH---hccc----cccCHHHHHHHHHHH
Q 039466 72 SASIIIAPTGLHKLANPEG---EVATARAAASCNTIM--VLSFTSSCSIEEVAA---SCNA----AYKKRDMAATLVQRA 139 (263)
Q Consensus 72 ~~Pi~iaP~~~~~l~~~~g---e~a~AraA~~~gi~~--~lss~s~~sieeV~~---~~~~----~~~d~~~~~~li~ra 139 (263)
..||.++++.. .|+. ...+.+.+.+.|++. +..+...-+.|++.+ ..+- +........+.+.+.
T Consensus 637 ~~p~gvN~~~~----~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p~~e~~~~~l~~~gi~~i~~v~~~~~a~~~v~~l 712 (2060)
T 2uva_G 637 GRGITVNLIYV----NPRAMGWQIPLLGRLRADGVPIEGLTIGAGVPSIEVANEYIQTLGIRHISFKPGSVDAIQQVINI 712 (2060)
T ss_dssp TCCEEEEEETT----CTTHHHHHHHHHHHHHTTTCCEEEEEEESSCCCHHHHHHHHHHSCCSEEEECCCSHHHHHHHHHH
T ss_pred CCCeEeccccc----CcccchhHHHHHHHHHHcCCCcceEeecCCCCCHHHHHHHHHHcCCeEEEecCCHHHHHHHHHHH
Confidence 36888888754 2442 236778888899998 666665545544433 2221 112223344444455
Q ss_pred HHcCCCEEE---Ec-cCCCCC-cchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhh
Q 039466 140 ERNGFMALV---LT-ADTPRL-DRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSI 214 (263)
Q Consensus 140 ~~aG~~al~---vT-vD~~~~-g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~ 214 (263)
+++|+++++ ++ .|+... |+ + | .. ....+-+.+|++.
T Consensus 713 ~~aG~D~iV~~q~~G~eaGGH~g~-~-d----------------------------~~---------~~~l~lv~~i~~~ 753 (2060)
T 2uva_G 713 AKANPTFPIILQWTGGRGGGHHSF-E-D----------------------------FH---------QPILLMYSRIRKC 753 (2060)
T ss_dssp HHHCTTSCEEEEECCTTSSSSCCS-C-C----------------------------SH---------HHHHHHHHHHHTS
T ss_pred HHcCCCEEEEeeeEcccCCCCCCc-c-c----------------------------cc---------chHHHHHHHHHHH
Confidence 678888776 22 222111 00 0 0 00 0013568889999
Q ss_pred cCCCEEEEe-cCCHHHHHHHH-----------HcCCCEEEEcC
Q 039466 215 TNLPILIKG-VLTREDAIKAV-----------EVGVAGIIVSN 245 (263)
Q Consensus 215 ~~lPiilKG-I~s~eDA~~a~-----------~~G~dgI~VSN 245 (263)
.++|||+=| |.+.+|+..++ .+|||||.+..
T Consensus 754 ~~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT 796 (2060)
T 2uva_G 754 SNIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGS 796 (2060)
T ss_dssp TTEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESG
T ss_pred cCCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEch
Confidence 999999999 99999999999 99999999854
No 171
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=93.57 E-value=0.034 Score=46.34 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=29.4
Q ss_pred cCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcCC
Q 039466 215 TNLPILIKG-VLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 215 ~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSNH 246 (263)
++.|+|+=| |.++||+.. +++||++|..||.
T Consensus 148 ~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~ 179 (188)
T 1vkf_A 148 PGRTVIAAGLVETEEEARE-ILKHVSAISTSSR 179 (188)
T ss_dssp TTSEEEEESCCCSHHHHHH-HTTTSSEEEECCH
T ss_pred cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCH
Confidence 788999999 999999999 9999999999985
No 172
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=93.30 E-value=1.1 Score=38.91 Aligned_cols=40 Identities=38% Similarity=0.613 Sum_probs=35.0
Q ss_pred CHHHHHHHHhhcCC-CEEEEe-cC--CHHHHHHHH----HcCCCEEEE
Q 039466 204 SWKDIEWLRSITNL-PILIKG-VL--TREDAIKAV----EVGVAGIIV 243 (263)
Q Consensus 204 ~W~dl~~lr~~~~l-PiilKG-I~--s~eDA~~a~----~~G~dgI~V 243 (263)
+.++++++++..+. ||++=| |- +.+|+...+ ++|++|+.+
T Consensus 183 ~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsv 230 (263)
T 1w8s_A 183 DPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAV 230 (263)
T ss_dssp SHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 67899999998888 999998 87 899988777 899999986
No 173
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=93.14 E-value=0.37 Score=40.64 Aligned_cols=68 Identities=21% Similarity=0.170 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+...++++.+.+.|++.+-+|..++. .-+.
T Consensus 26 ~~~~~~~~~~al~~gGv~~iel~~k~~~------------------------------------------------~~~~ 57 (214)
T 1wbh_A 26 KLEHAVPMAKALVAGGVRVLNVTLRTEC------------------------------------------------AVDA 57 (214)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEESCSTT------------------------------------------------HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCChh------------------------------------------------HHHH
Confidence 4555667788888899998888865421 0135
Q ss_pred HHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEE
Q 039466 208 IEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 208 l~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~V 243 (263)
|+.+++..+--++.-| |++.|+++.|+++|+|+|+.
T Consensus 58 i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~ 94 (214)
T 1wbh_A 58 IRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAIS 94 (214)
T ss_dssp HHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEE
T ss_pred HHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEc
Confidence 6667777765677777 68999999999999999953
No 174
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=93.14 E-value=0.069 Score=47.37 Aligned_cols=146 Identities=18% Similarity=0.276 Sum_probs=83.1
Q ss_pred HHHH-HHH--HCCCceeecCCCCccHHHHHHhcc-c------------cccCHHHHHHHHHHHHHcCCCEEEEccCCCCC
Q 039466 93 ATAR-AAA--SCNTIMVLSFTSSCSIEEVAASCN-A------------AYKKRDMAATLVQRAERNGFMALVLTADTPRL 156 (263)
Q Consensus 93 a~Ar-aA~--~~gi~~~lss~s~~sieeV~~~~~-~------------~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~ 156 (263)
.+++ +|+ +.++|.+|-.-=..++|.|.++-. | +-.|-+.++++++.|.+.|+.. -.-.-..
T Consensus 68 ~~v~~~A~~~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsV---EaElG~v 144 (288)
T 3q94_A 68 AMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSV---EAELGTV 144 (288)
T ss_dssp HHHHHHHHHTTCCSCEEEEEEEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEE---EEEESBC
T ss_pred HHHHHHHHhcCCCCcEEEECCCCCCHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeE---EEEeeee
Confidence 4444 455 588999886544457787765532 2 2235567888888888877421 1111111
Q ss_pred cchHHHHhh---hhhhh-hhhhhh-hccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEec--CCHHH
Q 039466 157 DRREADIKN---KMIAQ-QLKNLE-GLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGV--LTRED 229 (263)
Q Consensus 157 g~R~~d~r~---~~~~p-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI--~s~eD 229 (263)
|--|.+..+ .++-| ....+. ......+.-..++.++.|. ..+.++++.|+.|++.+++|+|+=|= ...|+
T Consensus 145 gG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~---~~p~Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~ 221 (288)
T 3q94_A 145 GGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHGPYK---GEPNLGFAEMEQVRDFTGVPLVLHGGTGIPTAD 221 (288)
T ss_dssp BCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSCCS---SSCCCCHHHHHHHHHHHCSCEEECCCTTCCHHH
T ss_pred ccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcccCCcC---CCCccCHHHHHHHHHhcCCCEEEeCCCCCCHHH
Confidence 221211111 12333 111111 0000001111122233331 34789999999999999999999996 78999
Q ss_pred HHHHHHcCCCEEEEc
Q 039466 230 AIKAVEVGVAGIIVS 244 (263)
Q Consensus 230 A~~a~~~G~dgI~VS 244 (263)
.++|+++|+.=|=|.
T Consensus 222 i~~ai~~Gv~KiNi~ 236 (288)
T 3q94_A 222 IEKAISLGTSKINVN 236 (288)
T ss_dssp HHHHHHTTEEEEEEC
T ss_pred HHHHHHcCCeEEEEC
Confidence 999999998777553
No 175
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=93.06 E-value=2 Score=37.57 Aligned_cols=146 Identities=18% Similarity=0.219 Sum_probs=78.8
Q ss_pred ChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc-cccCHHH-HHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhh
Q 039466 88 PEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA-AYKKRDM-AATLVQRAERNGFMALVLTADTPRLDRREADIKN 165 (263)
Q Consensus 88 ~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~-~~~d~~~-~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~ 165 (263)
.++-..+.+.|++.|++++.+-+...+++.+.+..+- ...-+.. ...+++.+.+.|...+ +.+...+ -..++.+
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~~kIgs~~~~n~~ll~~~a~~~kPV~---lk~G~~~-t~~ei~~ 163 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRYADMLQIGARNMQNFPLLREVGRSGKPVL---LKRGFGN-TVEELLA 163 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHHHTCCEE---EECCTTC-CHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHhCCeEEECcccccCHHHHHHHHccCCeEE---EcCCCCC-CHHHHHH
Confidence 3555588899999999999888888888888776331 1111111 2344555555553222 2222210 1122222
Q ss_pred hhhhhhhhhhh--hccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEE-----ec--CCHHHHHHHHHc
Q 039466 166 KMIAQQLKNLE--GLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIK-----GV--LTREDAIKAVEV 236 (263)
Q Consensus 166 ~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilK-----GI--~s~eDA~~a~~~ 236 (263)
.... +.... .+.. +.... . .+ .......+++..+..+++..++||++= |. +-.+-++.|+..
T Consensus 164 Ave~--i~~~Gn~~i~L--~~Rg~-~---~y-p~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g~~~~~~~~~~aAva~ 234 (276)
T 1vs1_A 164 AAEY--ILLEGNWQVVL--VERGI-R---TF-EPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAGRRSLVPALAKAGLAA 234 (276)
T ss_dssp HHHH--HHHTTCCCEEE--EECCB-C---CS-CCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHCSGGGHHHHHHHHHHT
T ss_pred HHHH--HHHcCCCeEEE--EeCCc-C---CC-CCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCCccchHHHHHHHHHHc
Confidence 1110 00000 0000 00000 0 00 001224468888999999999998752 22 115668888899
Q ss_pred CCCEEEEcCC
Q 039466 237 GVAGIIVSNH 246 (263)
Q Consensus 237 G~dgI~VSNH 246 (263)
|++|+++=-|
T Consensus 235 Ga~Gl~IE~H 244 (276)
T 1vs1_A 235 GADGLIVEVH 244 (276)
T ss_dssp TCSEEEEEBC
T ss_pred CCCEEEEEec
Confidence 9999999998
No 176
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=93.02 E-value=1.2 Score=40.51 Aligned_cols=145 Identities=18% Similarity=0.201 Sum_probs=73.8
Q ss_pred hhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc-cccCHHH-HHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhh
Q 039466 89 EGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA-AYKKRDM-AATLVQRAERNGFMALVLTADTPRLDRREADIKNK 166 (263)
Q Consensus 89 ~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~-~~~d~~~-~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~ 166 (263)
++-..+.+.|++.|++++.+-+...+++.+.+..+- ...-+.. ...+++.+.+.|..- -+.+...+ -..++.+.
T Consensus 157 egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~vd~lkIgAr~~~n~~LL~~va~~~kPV---ilk~G~~~-tl~ei~~A 232 (350)
T 1vr6_A 157 KGLEYLREAADKYGMYVVTEALGEDDLPKVAEYADIIQIGARNAQNFRLLSKAGSYNKPV---LLKRGFMN-TIEEFLLS 232 (350)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHTTCSCE---EEECCTTC-CHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHhCCEEEECcccccCHHHHHHHHccCCcE---EEcCCCCC-CHHHHHHH
Confidence 344467777888888888777777777777666321 1111111 234555554444222 22222211 11122221
Q ss_pred hhhhhhhhhh--hccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEE-----ec--CCHHHHHHHHHcC
Q 039466 167 MIAQQLKNLE--GLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIK-----GV--LTREDAIKAVEVG 237 (263)
Q Consensus 167 ~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilK-----GI--~s~eDA~~a~~~G 237 (263)
... +.... .+.. ...+. . .+ .......+++..|..+++.+++||++= |- +-..-++.|+..|
T Consensus 233 ve~--i~~~GN~~viL--ceRG~-~---ty-p~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G~~~~v~~~a~AAvA~G 303 (350)
T 1vr6_A 233 AEY--IANSGNTKIIL--CERGI-R---TF-EKATRNTLDISAVPIIRKESHLPILVDPSHSGGRRDLVIPLSRAAIAVG 303 (350)
T ss_dssp HHH--HHHTTCCCEEE--EECCB-C---CS-CCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHCSGGGHHHHHHHHHHHT
T ss_pred HHH--HHHCCCCeEEE--EeCCC-C---CC-CCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCcccchHHHHHHHHHHhC
Confidence 110 00000 0000 00000 0 00 000123468888999999999998762 21 1166688888999
Q ss_pred CCEEEEcCC
Q 039466 238 VAGIIVSNH 246 (263)
Q Consensus 238 ~dgI~VSNH 246 (263)
++|+++=-|
T Consensus 304 A~Gl~IE~H 312 (350)
T 1vr6_A 304 AHGIIVEVH 312 (350)
T ss_dssp CSEEEEEBC
T ss_pred CCEEEEEec
Confidence 999999888
No 177
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=92.98 E-value=0.42 Score=40.62 Aligned_cols=67 Identities=22% Similarity=0.251 Sum_probs=48.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
+.+...++++.+.+.|++.+-+|..++. .-+.
T Consensus 27 ~~~~~~~~~~al~~gGv~~iel~~k~~~------------------------------------------------~~~~ 58 (224)
T 1vhc_A 27 NADDILPLADTLAKNGLSVAEITFRSEA------------------------------------------------AADA 58 (224)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEETTSTT------------------------------------------------HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCch------------------------------------------------HHHH
Confidence 5555677888888899998888865421 0134
Q ss_pred HHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEE
Q 039466 208 IEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGII 242 (263)
Q Consensus 208 l~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~ 242 (263)
|+.+++..+-=++.-| |++.|+++.|+++|+|+|+
T Consensus 59 i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~ 94 (224)
T 1vhc_A 59 IRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVV 94 (224)
T ss_dssp HHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEE
Confidence 6667777653345556 6899999999999999993
No 178
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=92.83 E-value=0.7 Score=38.78 Aligned_cols=115 Identities=15% Similarity=0.108 Sum_probs=68.3
Q ss_pred ccCCCh--hHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc-c----ccC---HH----HHHHHHHHHHHcCCCEEEE
Q 039466 84 KLANPE--GEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA-A----YKK---RD----MAATLVQRAERNGFMALVL 149 (263)
Q Consensus 84 ~l~~~~--ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~-~----~~d---~~----~~~~li~ra~~aG~~al~v 149 (263)
.+.+++ --..+|+++.+.|+..+ ...+..-++.|++...- + .++ -. ...+.++.+.++|++.+.+
T Consensus 29 p~~~~~~~~~~~~a~~~~~~G~~~i-~~~~~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l 107 (234)
T 1yxy_A 29 PLYSETGGIMPLMAKAAQEAGAVGI-RANSVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAM 107 (234)
T ss_dssp TTCCTTCCSHHHHHHHHHHHTCSEE-EEESHHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEE
T ss_pred CCcCCccchHHHHHHHHHHCCCcEe-ecCCHHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEE
Confidence 344555 44589999999997554 22222234444443221 1 111 00 1235577788899988776
Q ss_pred ccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEecCCHHH
Q 039466 150 TADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGVLTRED 229 (263)
Q Consensus 150 TvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI~s~eD 229 (263)
+..... ..+.....+.++.+++.++.-.++-++.++++
T Consensus 108 ~~~~~~------------------------------------------~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~e 145 (234)
T 1yxy_A 108 DCTKRD------------------------------------------RHDGLDIASFIRQVKEKYPNQLLMADISTFDE 145 (234)
T ss_dssp ECCSSC------------------------------------------CTTCCCHHHHHHHHHHHCTTCEEEEECSSHHH
T ss_pred cccccC------------------------------------------CCCCccHHHHHHHHHHhCCCCeEEEeCCCHHH
Confidence 654310 00001124568888888743345557999999
Q ss_pred HHHHHHcCCCEE
Q 039466 230 AIKAVEVGVAGI 241 (263)
Q Consensus 230 A~~a~~~G~dgI 241 (263)
++.+.+.|+|.|
T Consensus 146 a~~a~~~Gad~i 157 (234)
T 1yxy_A 146 GLVAHQAGIDFV 157 (234)
T ss_dssp HHHHHHTTCSEE
T ss_pred HHHHHHcCCCEE
Confidence 999999999998
No 179
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=92.63 E-value=0.49 Score=38.85 Aligned_cols=70 Identities=26% Similarity=0.187 Sum_probs=49.5
Q ss_pred cCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHH
Q 039466 127 KKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWK 206 (263)
Q Consensus 127 ~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 206 (263)
.|.+...++++.+.+.|+..+-+|..++. .-+
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~~~~------------------------------------------------~~~ 50 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFTVPD------------------------------------------------ADT 50 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETTSTT------------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCChh------------------------------------------------HHH
Confidence 46677888899999999999987766431 012
Q ss_pred HHHHHHhhcC-CCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 207 DIEWLRSITN-LPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 207 dl~~lr~~~~-lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.++.+|+.++ -.+|.-| +.++++++.|.+.|+|.| |+.
T Consensus 51 ~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~~ 90 (205)
T 1wa3_A 51 VIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-VSP 90 (205)
T ss_dssp HHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE-ECS
T ss_pred HHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE-EcC
Confidence 3666776653 1233333 689999999999999999 553
No 180
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.59 E-value=0.15 Score=42.60 Aligned_cols=45 Identities=9% Similarity=0.275 Sum_probs=39.6
Q ss_pred CCCCHHHHHHHHhh--cCCCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 201 PSLSWKDIEWLRSI--TNLPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 201 ~~~~W~dl~~lr~~--~~lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.++|+.++++++. .++||+.=|=.+++++..++++|++||.|+.
T Consensus 127 ~~~g~~~l~~~~~~~~~~iPviaiGGI~~~nv~~~~~~Ga~gVav~s 173 (210)
T 3ceu_A 127 STYTAEELREAQKAKIIDSKVMALGGINEDNLLEIKDFGFGGAVVLG 173 (210)
T ss_dssp CCCCHHHHHHHHHTTCSSTTEEEESSCCTTTHHHHHHTTCSEEEESH
T ss_pred CCCCHHHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhCCCEEEEhH
Confidence 46799999999987 6899999995569999999999999999864
No 181
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=92.49 E-value=0.75 Score=40.55 Aligned_cols=41 Identities=20% Similarity=0.118 Sum_probs=34.1
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
+.+.|+.+++..++||++|- +...++++.+.+.|||+|+.+
T Consensus 66 ~~~~i~~I~~~~~iPv~~k~r~g~~~~~~~~~a~GAd~V~~~ 107 (305)
T 2nv1_A 66 DPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYIDES 107 (305)
T ss_dssp CHHHHHHHHHHCSSCEEEEECTTCHHHHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHhCCCCEEecccccchHHHHHHHHCCCCEEEEe
Confidence 56789999999999999874 334889999999999999743
No 182
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=92.47 E-value=0.66 Score=40.53 Aligned_cols=40 Identities=23% Similarity=0.266 Sum_probs=32.8
Q ss_pred HHHHHHHHhh-cCCCEEEEecCCH-------HHHHHHHHcCCCEEEEc
Q 039466 205 WKDIEWLRSI-TNLPILIKGVLTR-------EDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 205 W~dl~~lr~~-~~lPiilKGI~s~-------eDA~~a~~~G~dgI~VS 244 (263)
++.++.+|+. .++||++-+-.++ .=++.+.++|+||++|.
T Consensus 83 ~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~ 130 (267)
T 3vnd_A 83 FDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIA 130 (267)
T ss_dssp HHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeC
Confidence 4668889987 8999999987554 34788889999999985
No 183
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=92.47 E-value=0.68 Score=40.55 Aligned_cols=90 Identities=13% Similarity=0.160 Sum_probs=56.4
Q ss_pred cCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCC--
Q 039466 127 KKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLS-- 204 (263)
Q Consensus 127 ~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 204 (263)
.|.+.+.++++..+++|++.|=+.+=. +-| .. + +..+++..........+
T Consensus 31 P~~~~~~~~~~~l~~~GaD~iElGiPf--------------SDP---~a---------D--GpvIq~a~~rAL~~G~~~~ 82 (271)
T 3nav_A 31 PNPEQSLAIMQTLIDAGADALELGMPF--------------SDP---LA---------D--GPTIQGANLRALAAKTTPD 82 (271)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCC--------------CCG---GG---------C--CSHHHHHHHHHHHTTCCHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCC--------------CCC---CC---------C--CHHHHHHHHHHHHcCCCHH
Confidence 456788999999999998876655431 111 00 0 00111111111122344
Q ss_pred --HHHHHHHHhh-cCCCEEEEecCC-------HHHHHHHHHcCCCEEEEc
Q 039466 205 --WKDIEWLRSI-TNLPILIKGVLT-------REDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 205 --W~dl~~lr~~-~~lPiilKGI~s-------~eDA~~a~~~G~dgI~VS 244 (263)
++.++++|+. .++||++-+-.+ ..=++.|.++|+||++|.
T Consensus 83 ~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIip 132 (271)
T 3nav_A 83 ICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIA 132 (271)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEEC
Confidence 4678889887 899999988533 334888999999999985
No 184
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=92.30 E-value=0.59 Score=40.43 Aligned_cols=90 Identities=17% Similarity=0.220 Sum_probs=55.9
Q ss_pred cCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCC--
Q 039466 127 KKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLS-- 204 (263)
Q Consensus 127 ~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 204 (263)
.|.+.+.++++..+++|+++|-+.+ |...- +..+ | .+++..........+
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~--P~sdP----~adg---p-------------------~i~~a~~~al~~G~~~~ 79 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGF--PFSDP----VADG---P-------------------TIQVAHEVALKNGIRFE 79 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEEC--CCSCC----TTSC---H-------------------HHHHHHHHHHHTTCCHH
T ss_pred CChHHHHHHHHHHHHcCCCEEEECC--CCCCc----cccc---H-------------------HHHHHHHHHHHcCCCHH
Confidence 4556788889999999999988754 22100 0000 0 001110011111222
Q ss_pred --HHHHHHHHhhc-CCCEEEEecCC-------HHHHHHHHHcCCCEEEEc
Q 039466 205 --WKDIEWLRSIT-NLPILIKGVLT-------REDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 205 --W~dl~~lr~~~-~lPiilKGI~s-------~eDA~~a~~~G~dgI~VS 244 (263)
.+.++++|+.. ++|+++=+-.+ ...++.|.++|+||+++.
T Consensus 80 ~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~ 129 (262)
T 2ekc_A 80 DVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVP 129 (262)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECT
T ss_pred HHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEEC
Confidence 35689999998 99999954433 477888999999999985
No 185
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=92.28 E-value=0.11 Score=45.13 Aligned_cols=39 Identities=28% Similarity=0.469 Sum_probs=34.1
Q ss_pred HHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 206 KDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.++++|+.+++|+++=+ |.++|+++.+.+ ++||++|.+
T Consensus 189 ~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGS 228 (252)
T 3tha_A 189 DKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK-VADGVIVGT 228 (252)
T ss_dssp HHHHHHHTTCCSCEEEESSCCSHHHHHHHTT-TSSEEEECH
T ss_pred HHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh-cCCEEEECH
Confidence 458999999999998866 999999998877 599999975
No 186
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=92.22 E-value=1.1 Score=38.02 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=30.2
Q ss_pred HHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEE
Q 039466 207 DIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 207 dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~V 243 (263)
-++..|+ .+.|+++ |+.|++++.+|.+.|+|.|-+
T Consensus 102 v~~~ar~-~g~~~i~-Gv~t~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 102 IVKLCQD-LNFPITP-GVNNPMAIEIALEMGISAVKF 136 (224)
T ss_dssp HHHHHHH-TTCCEEC-EECSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHH-hCCCEEe-ccCCHHHHHHHHHCCCCEEEE
Confidence 3566666 7888877 899999999999999999988
No 187
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=92.14 E-value=0.53 Score=40.82 Aligned_cols=40 Identities=20% Similarity=0.345 Sum_probs=32.3
Q ss_pred HHHHHHHHhh-cCCCEEEEe----cCC---HHHHHHHHHcCCCEEEEc
Q 039466 205 WKDIEWLRSI-TNLPILIKG----VLT---REDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 205 W~dl~~lr~~-~~lPiilKG----I~s---~eDA~~a~~~G~dgI~VS 244 (263)
.+.++.+|+. .++||++=+ |.. .+.++.+.++|+|||++.
T Consensus 82 ~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~ 129 (268)
T 1qop_A 82 FEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVA 129 (268)
T ss_dssp HHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEc
Confidence 4679999999 899998843 222 578888999999999985
No 188
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=92.12 E-value=0.68 Score=40.29 Aligned_cols=40 Identities=18% Similarity=0.428 Sum_probs=36.9
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEE
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~V 243 (263)
+.++|..+|+.+++||+-|- |.++-....|..+|||+|.+
T Consensus 92 s~~~L~~vr~~v~lPvLrKDFiid~yQI~eAr~~GADaILL 132 (258)
T 4a29_A 92 SYETLRKIASSVSIPILMSDFIVKESQIDDAYNLGADTVLL 132 (258)
T ss_dssp CHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHhcCCCEeeccccccHHHHHHHHHcCCCeeeh
Confidence 45899999999999999999 89999999999999999964
No 189
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=91.89 E-value=0.16 Score=45.44 Aligned_cols=45 Identities=22% Similarity=0.408 Sum_probs=39.1
Q ss_pred CCCCCHHHHHHHHhhc--CCCEEEEec--CCHHHHHHHHHcCCCEEEEc
Q 039466 200 DPSLSWKDIEWLRSIT--NLPILIKGV--LTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 200 ~~~~~W~dl~~lr~~~--~lPiilKGI--~s~eDA~~a~~~G~dgI~VS 244 (263)
.+.++++.|+.|++.+ ++|+|+=|- ...|+.++|+++|+.=|=|.
T Consensus 203 ~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~ 251 (306)
T 3pm6_A 203 GVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERGVAKVNVN 251 (306)
T ss_dssp CCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTTEEEEEES
T ss_pred CCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcCCeEEEeC
Confidence 4678999999999998 699999996 68899999999998777553
No 190
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=91.85 E-value=0.85 Score=39.65 Aligned_cols=42 Identities=17% Similarity=0.237 Sum_probs=31.6
Q ss_pred CHHHHHHHHhhcC--CCEE-EEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSITN--LPIL-IKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~~--lPii-lKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.+.-..|++..+ ..+| --||.+++|+.++.++|++|+.|..
T Consensus 190 dl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGe 234 (258)
T 4a29_A 190 NKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISS 234 (258)
T ss_dssp CHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECH
T ss_pred CHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECH
Confidence 4556667777653 2333 3579999999999999999999964
No 191
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=91.83 E-value=1.2 Score=40.93 Aligned_cols=45 Identities=20% Similarity=0.347 Sum_probs=34.9
Q ss_pred CCCHHHHHHHHhhcCCCEEEEecCC-------HHHHHHHHHcCCCEEEEcCC
Q 039466 202 SLSWKDIEWLRSITNLPILIKGVLT-------REDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKGI~s-------~eDA~~a~~~G~dgI~VSNH 246 (263)
.++|..|..+++.+++||+.=--.+ +.-|+.|+.+||+|++|=-|
T Consensus 297 ~ldl~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H 348 (385)
T 3nvt_A 297 TLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVH 348 (385)
T ss_dssp BCCTTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBC
T ss_pred ccCHHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEec
Confidence 4688899999999999985431111 24588899999999999777
No 192
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=91.75 E-value=0.18 Score=47.46 Aligned_cols=40 Identities=18% Similarity=0.196 Sum_probs=35.7
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEE
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~V 243 (263)
+.+||+.+|+.+++||+-|- |.++-....|..+|||+|.+
T Consensus 96 s~~dL~~vr~~v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILL 136 (452)
T 1pii_A 96 SFNFLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACLL 136 (452)
T ss_dssp CTTHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHcCCCEEEE
Confidence 34899999999999999999 78888888999999999865
No 193
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=91.74 E-value=0.64 Score=40.76 Aligned_cols=104 Identities=15% Similarity=0.089 Sum_probs=72.4
Q ss_pred HHHHHHHHCCCcee--ecCCCCccHHHHHHhccccccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhh
Q 039466 93 ATARAAASCNTIMV--LSFTSSCSIEEVAASCNAAYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQ 170 (263)
Q Consensus 93 a~AraA~~~gi~~~--lss~s~~sieeV~~~~~~~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p 170 (263)
.+.+.|.+.|+... +++..+++-+ ...|++...++++++.++|++.|.+- |+.. . ..
T Consensus 124 ~~v~~a~~~G~~V~~~l~~~~~~e~~--------~~~~~~~~~~~~~~~~~~G~d~i~l~-Dt~G--~---------~~- 182 (295)
T 1ydn_A 124 PVIGAAINDGLAIRGYVSCVVECPYD--------GPVTPQAVASVTEQLFSLGCHEVSLG-DTIG--R---------GT- 182 (295)
T ss_dssp HHHHHHHHTTCEEEEEEECSSEETTT--------EECCHHHHHHHHHHHHHHTCSEEEEE-ETTS--C---------CC-
T ss_pred HHHHHHHHcCCeEEEEEEEEecCCcC--------CCCCHHHHHHHHHHHHhcCCCEEEec-CCCC--C---------cC-
Confidence 44677788887655 4443322110 24678888899999999999988876 5421 1 11
Q ss_pred hhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcC-CCEEEEec----CCHHHHHHHHHcCCCEEEEcC
Q 039466 171 QLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITN-LPILIKGV----LTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~-lPiilKGI----~s~eDA~~a~~~G~dgI~VSN 245 (263)
|....+-+++|++.++ +||.+-+= +....+..|+++|++-|.+|=
T Consensus 183 ------------------------------P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~sv 232 (295)
T 1ydn_A 183 ------------------------------PDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDASV 232 (295)
T ss_dssp ------------------------------HHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEEBT
T ss_pred ------------------------------HHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEEecc
Confidence 1112356889999988 89999882 677888999999999999875
Q ss_pred CC
Q 039466 246 HG 247 (263)
Q Consensus 246 HG 247 (263)
.|
T Consensus 233 ~G 234 (295)
T 1ydn_A 233 GG 234 (295)
T ss_dssp TC
T ss_pred cc
Confidence 54
No 194
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=91.56 E-value=0.21 Score=45.78 Aligned_cols=41 Identities=20% Similarity=0.073 Sum_probs=36.5
Q ss_pred HHHHHHHHhhcC-CCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSITN-LPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~~-lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
...|.++++..+ +|||.-| |.+++|+.+++.+|||+|.++.
T Consensus 255 ~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~lGA~~v~ig~ 297 (368)
T 3vkj_A 255 AASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMAL 297 (368)
T ss_dssp HHHHHHHHHHSTTCEEEEESSCCSHHHHHHHHHHTCSEEEECH
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcH
Confidence 366888888874 9999998 9999999999999999999974
No 195
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=91.56 E-value=0.21 Score=45.69 Aligned_cols=39 Identities=10% Similarity=0.151 Sum_probs=34.2
Q ss_pred HHHHHHHhhcCCCEEEEecCCHHHHHHHHHcC-CCEEEEc
Q 039466 206 KDIEWLRSITNLPILIKGVLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G-~dgI~VS 244 (263)
+.++++|+.+++|||+-|=.++++|+.+++.| ||.|.++
T Consensus 269 ~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~g~aD~V~iG 308 (362)
T 4ab4_A 269 SIGPLIKEAFGGPYIVNERFDKASANAALASGKADAVAFG 308 (362)
T ss_dssp CCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHCCCCEEEeCCCCHHHHHHHHHcCCccEEEEC
Confidence 34889999999999999933999999999988 9999873
No 196
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=91.50 E-value=0.9 Score=38.96 Aligned_cols=41 Identities=20% Similarity=0.253 Sum_probs=31.0
Q ss_pred HHHHHHHHhhcCCCEEEEecCCHHH---HHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSITNLPILIKGVLTRED---AIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKGI~s~eD---A~~a~~~G~dgI~VSN 245 (263)
.+.++.+|+.+++||++.+-.++.. ...|.+.|+|||++.+
T Consensus 83 ~~~i~~ir~~~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~d 126 (262)
T 1rd5_A 83 LEMLREVTPELSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVPD 126 (262)
T ss_dssp HHHHHHHGGGCSSCEEEECCSHHHHSCCTHHHHHTTCCEEECTT
T ss_pred HHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEcC
Confidence 4678999999999999976444321 3348899999999854
No 197
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=91.48 E-value=0.21 Score=45.58 Aligned_cols=39 Identities=15% Similarity=0.198 Sum_probs=34.3
Q ss_pred HHHHHHHhhcCCCEEEEecCCHHHHHHHHHcC-CCEEEEc
Q 039466 206 KDIEWLRSITNLPILIKGVLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G-~dgI~VS 244 (263)
+.++++|+.+++|||.-|=.++++|+.+++.| ||.|.++
T Consensus 277 ~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~G~aD~V~iG 316 (361)
T 3gka_A 277 AIGQQLKAAFGGPFIVNENFTLDSAQAALDAGQADAVAWG 316 (361)
T ss_dssp CCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCccEEEEC
Confidence 35889999999999999933999999999988 9999873
No 198
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=91.41 E-value=0.18 Score=50.05 Aligned_cols=41 Identities=20% Similarity=0.239 Sum_probs=37.7
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEEc
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~VS 244 (263)
.|+.++++|+.+++|||.-| |.++++|+.+++.| ||+|.++
T Consensus 279 ~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~g 321 (729)
T 1o94_A 279 TIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGCA 321 (729)
T ss_dssp THHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSCSBEEES
T ss_pred cHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCCCCEEEeC
Confidence 57889999999999999998 88999999999987 9999875
No 199
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=91.24 E-value=1.7 Score=38.41 Aligned_cols=39 Identities=23% Similarity=0.381 Sum_probs=30.6
Q ss_pred HHHHHHHhhcCCCEEEEe-cC-CHH----HHHHHHHcCCCEEEEc
Q 039466 206 KDIEWLRSITNLPILIKG-VL-TRE----DAIKAVEVGVAGIIVS 244 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKG-I~-s~e----DA~~a~~~G~dgI~VS 244 (263)
+.++++++..++||++-| +. +.+ .++.|+++|++|++|.
T Consensus 213 e~~~~vv~~~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vG 257 (295)
T 3glc_A 213 KGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMG 257 (295)
T ss_dssp TTHHHHHHTCSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHhCCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeH
Confidence 457889988999999999 65 443 4556669999999983
No 200
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=91.08 E-value=1.2 Score=39.21 Aligned_cols=148 Identities=16% Similarity=0.216 Sum_probs=80.2
Q ss_pred CCcccCCChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc------cccCHHHHHHHHHHHHHcCCCEEEEccCCC
Q 039466 81 GLHKLANPEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA------AYKKRDMAATLVQRAERNGFMALVLTADTP 154 (263)
Q Consensus 81 ~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~------~~~d~~~~~~li~ra~~aG~~al~vTvD~~ 154 (263)
+++++.-.+|=..+.+.|++.|++++..-....+++.+.+..+- -.+|- .+++.+.+.|...++ ...
T Consensus 70 sf~G~g~~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~vd~lqIgA~~~~n~----~LLr~va~~gkPVil---K~G 142 (285)
T 3sz8_A 70 SYRGVGLDEGLKIFAEVKARFGVPVITDVHEAEQAAPVAEIADVLQVPAFLARQT----DLVVAIAKAGKPVNV---KKP 142 (285)
T ss_dssp SCCCSCHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTTCSEEEECGGGTTCH----HHHHHHHHTSSCEEE---ECC
T ss_pred CcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCEEEECccccCCH----HHHHHHHccCCcEEE---eCC
Confidence 44444223455579999999999999888888888888766331 22333 366666666643332 221
Q ss_pred CCcchHHHHhhhhhhhhhhhhhhccccCCCC-CCCccHHHHHHHhcCCCCCHHHHHHHHhhc-CCCEEEEecCC------
Q 039466 155 RLDRREADIKNKMIAQQLKNLEGLLSTKVTS-DTGSNLEAYAKETMDPSLSWKDIEWLRSIT-NLPILIKGVLT------ 226 (263)
Q Consensus 155 ~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~-~lPiilKGI~s------ 226 (263)
.. --..|+.+.... +.... ..++-- .... .| ...+..++...|..+|+.+ ++||++---.+
T Consensus 143 ~~-~t~~ei~~ave~--i~~~G---n~~i~L~erg~---~y--~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~~ 211 (285)
T 3sz8_A 143 QF-MSPTQLKHVVSK--CGEVG---NDRVMLCERGS---SF--GYDNLVVDMLGFRQMAETTGGCPVIFDVTHSLQCRDP 211 (285)
T ss_dssp TT-SCGGGTHHHHHH--HHHTT---CCCEEEEECCE---EC--SSSCEECCTTHHHHHHHHTTSCCEEEETTTTCC----
T ss_pred CC-CCHHHHHHHHHH--HHHcC---CCcEEEEeCCC---CC--CCCcCccCHHHHHHHHHhCCCCCEEEeCCCccccCCC
Confidence 11 001112111110 00000 000000 0000 00 0011124667899999999 59999843222
Q ss_pred ------------HHHHHHHHHcCCCEEEEcCC
Q 039466 227 ------------REDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 227 ------------~eDA~~a~~~G~dgI~VSNH 246 (263)
+.-|+.|+.+|+||++|=-|
T Consensus 212 ~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H 243 (285)
T 3sz8_A 212 LGDASGGRRRQVLDLARAGIAVGIAGLFLEAH 243 (285)
T ss_dssp -----------HHHHHHHHHHHCCSEEEEEEE
T ss_pred cCCCCCCchhhHHHHHHHHHHhCCCEEEEEec
Confidence 56788899999999999766
No 201
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=90.97 E-value=0.19 Score=41.62 Aligned_cols=41 Identities=22% Similarity=0.349 Sum_probs=36.2
Q ss_pred CHHHHHHHHhhcC--CCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSITN--LPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~~--lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+|+.++++++..+ +||++=| | +++++..+.++|++||+|..
T Consensus 134 g~~~~~~l~~~~~~~ipvia~GGI-~~~~i~~~~~~Ga~gv~vGs 177 (212)
T 2v82_A 134 GPQYIKALKAVLPSDIAVFAVGGV-TPENLAQWIDAGCAGAGLGS 177 (212)
T ss_dssp CHHHHHHHHTTSCTTCEEEEESSC-CTTTHHHHHHHTCSEEEECT
T ss_pred CHHHHHHHHHhccCCCeEEEeCCC-CHHHHHHHHHcCCCEEEECh
Confidence 5788999999886 9999988 7 49999999999999999853
No 202
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=90.91 E-value=0.17 Score=49.74 Aligned_cols=42 Identities=14% Similarity=0.227 Sum_probs=37.7
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEEc
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIVS 244 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~VS 244 (263)
..|+.++++|+.+++|||.-| |.++++|+.+++.| ||.|.+.
T Consensus 281 ~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~g 324 (690)
T 3k30_A 281 RQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAA 324 (690)
T ss_dssp TTHHHHTTSGGGCSSCEEECSCCCCHHHHHHHHHTTSCSEEEES
T ss_pred ccHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHCCCcceEEEc
Confidence 457789999999999999999 89999999999987 9999874
No 203
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=90.59 E-value=1.5 Score=39.39 Aligned_cols=41 Identities=22% Similarity=0.195 Sum_probs=36.2
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
+-++|+++++..++||+.|= |-..++++.+..+|||.|..|
T Consensus 62 ~p~~i~~I~~av~iPV~~K~rig~~~e~qilea~GaD~Id~s 103 (330)
T 2yzr_A 62 DPALIEEIMDAVSIPVMAKCRIGHTTEALVLEAIGVDMIDES 103 (330)
T ss_dssp CHHHHHHHHHHCSSCEEEEEETTCHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHhcCCCeEEEEeecchHHHHHHHHcCCCEEehh
Confidence 67899999999999999997 556788888888999999876
No 204
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=90.38 E-value=0.43 Score=39.90 Aligned_cols=41 Identities=7% Similarity=-0.001 Sum_probs=34.1
Q ss_pred HHHHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+.|+.+++.. ++||+.=|=.+++++...+++|++++.|++
T Consensus 139 ~~~lk~l~~~~~~ipvvaiGGI~~~n~~~~l~aGa~~vavgS 180 (207)
T 2yw3_A 139 VRVLRAYAEVFPEVRFLPTGGIKEEHLPHYAALPNLLAVGGS 180 (207)
T ss_dssp HHHHHHHHHHCTTCEEEEBSSCCGGGHHHHHTCSSBSCEEES
T ss_pred HHHHHHHHhhCCCCcEEEeCCCCHHHHHHHHhCCCcEEEEeh
Confidence 45688889888 799998883357999999999999998854
No 205
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=90.15 E-value=0.95 Score=42.88 Aligned_cols=30 Identities=17% Similarity=0.323 Sum_probs=27.9
Q ss_pred CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 216 NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 216 ~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
++|||.=| |.++.|+.+|+.+||++|++..
T Consensus 352 ~ipvia~GGi~~~~di~kAlalGA~~V~iG~ 382 (503)
T 1me8_A 352 YIPVCSDGGIVYDYHMTLALAMGADFIMLGR 382 (503)
T ss_dssp ECCEEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred CceEEEeCCCCCHHHHHHHHHcCCCEEEECc
Confidence 69999988 9999999999999999999864
No 206
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=89.91 E-value=3.3 Score=35.17 Aligned_cols=105 Identities=10% Similarity=0.011 Sum_probs=67.2
Q ss_pred ChhHHHHHHHHHHCCC--ceeecCCCCccHHHHHHhccc----cccCH----HHHHHHHHHHHHcCCCEEEEccCCCCCc
Q 039466 88 PEGEVATARAAASCNT--IMVLSFTSSCSIEEVAASCNA----AYKKR----DMAATLVQRAERNGFMALVLTADTPRLD 157 (263)
Q Consensus 88 ~~ge~a~AraA~~~gi--~~~lss~s~~sieeV~~~~~~----~~~d~----~~~~~li~ra~~aG~~al~vTvD~~~~g 157 (263)
++-+..+++..++.|. ..+++|+....++.+++..|. +..+. ......++.++..|+..+.....
T Consensus 116 ~~~~~~v~~~l~~~~~~~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 190 (250)
T 3ks6_A 116 EGFVALVIAGLERHSMLERTTFSSFLLASMDELWKATTRPRLWLVSPSVLQQLGPGAVIETAIAHSIHEIGVHID----- 190 (250)
T ss_dssp TTHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCCSCEEEEECHHHHHHHHHHHHHHHHHHTTCCEEEEEGG-----
T ss_pred hHHHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEecccccccchhHHHHHHHhcCCCEEecchh-----
Confidence 4455677777777664 567888887788888887775 11111 01123444455555444322111
Q ss_pred chHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEecCCHHHHHHHHHcC
Q 039466 158 RREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGVLTREDAIKAVEVG 237 (263)
Q Consensus 158 ~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G 237 (263)
.++-+.++.+++ .+++|.+=.|-++++++++.+.|
T Consensus 191 --------------------------------------------~~~~~~v~~~~~-~G~~V~~WTvn~~~~~~~l~~~G 225 (250)
T 3ks6_A 191 --------------------------------------------TADAGLMAQVQA-AGLDFGCWAAHTPSQITKALDLG 225 (250)
T ss_dssp --------------------------------------------GCCHHHHHHHHH-TTCEEEEECCCSHHHHHHHHHHT
T ss_pred --------------------------------------------hCCHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHcC
Confidence 122244555654 48899999999999999999999
Q ss_pred CCEEE
Q 039466 238 VAGII 242 (263)
Q Consensus 238 ~dgI~ 242 (263)
||||+
T Consensus 226 VDgIi 230 (250)
T 3ks6_A 226 VKVFT 230 (250)
T ss_dssp CSEEE
T ss_pred CCEEE
Confidence 99996
No 207
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=89.76 E-value=0.38 Score=41.72 Aligned_cols=127 Identities=9% Similarity=0.058 Sum_probs=68.6
Q ss_pred HHHHHHHCCCceeecCCCCccHH--HHHHhccc------cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhh
Q 039466 94 TARAAASCNTIMVLSFTSSCSIE--EVAASCNA------AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKN 165 (263)
Q Consensus 94 ~AraA~~~gi~~~lss~s~~sie--eV~~~~~~------~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~ 165 (263)
+..+.+..++|..-=.+-..+++ +.+..+.+ -..+++...+++++|++.|...++= |.+ +.++..
T Consensus 93 L~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvE-v~~------~eE~~~ 165 (251)
T 1i4n_A 93 VRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVE-VHS------REDLEK 165 (251)
T ss_dssp HHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEE-ECS------HHHHHH
T ss_pred HHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEE-eCC------HHHHHH
Confidence 33333456777665554444442 22223333 1235567888999999888766543 332 112221
Q ss_pred hhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEE
Q 039466 166 KMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGII 242 (263)
Q Consensus 166 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~ 242 (263)
...+++ ..+..+...++ .+-..+++....|.+.. +.++|--| |.+++|++++.++ ++|++
T Consensus 166 A~~l~g-~~iIGinnr~l---------------~t~~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avL 228 (251)
T 1i4n_A 166 VFSVIR-PKIIGINTRDL---------------DTFEIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VNAVL 228 (251)
T ss_dssp HHTTCC-CSEEEEECBCT---------------TTCCBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-CSEEE
T ss_pred HHhcCC-CCEEEEeCccc---------------ccCCCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEE
Confidence 111100 00000111111 01123466677777766 35666555 9999999999999 99999
Q ss_pred Ec
Q 039466 243 VS 244 (263)
Q Consensus 243 VS 244 (263)
|.
T Consensus 229 VG 230 (251)
T 1i4n_A 229 VG 230 (251)
T ss_dssp EC
T ss_pred Ec
Confidence 85
No 208
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=89.76 E-value=1.7 Score=39.24 Aligned_cols=37 Identities=22% Similarity=0.240 Sum_probs=33.4
Q ss_pred HHHHHHhhcCCCEEEEecCCHHHHHHHHHcC-CCEEEE
Q 039466 207 DIEWLRSITNLPILIKGVLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 207 dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G-~dgI~V 243 (263)
..+++|+.++.||++-|+.++++|+.+++.| ||.|-+
T Consensus 277 ~a~~ik~~~~~~v~~~g~~~~~~ae~~l~~G~aD~V~~ 314 (358)
T 4a3u_A 277 LSPEIRKVFKPPLVLNQDYTFETAQAALDSGVADAISF 314 (358)
T ss_dssp CHHHHHHHCCSCEEEESSCCHHHHHHHHHHTSCSEEEE
T ss_pred HHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCceEeHh
Confidence 4678899999999999999999999999998 898876
No 209
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=89.32 E-value=2.2 Score=38.70 Aligned_cols=40 Identities=20% Similarity=0.361 Sum_probs=36.1
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
+|+.+++|++.+++||+.-| +.+++|++.+++.| +|.|.+
T Consensus 225 ~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~i 266 (378)
T 3eez_A 225 TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGI 266 (378)
T ss_dssp SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEe
Confidence 89999999999999999988 89999999999975 787754
No 210
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=89.12 E-value=2 Score=35.89 Aligned_cols=78 Identities=15% Similarity=0.177 Sum_probs=53.9
Q ss_pred cCHHHHHHHHHHHHHcCCCEEEEcc-CCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCH
Q 039466 127 KKRDMAATLVQRAERNGFMALVLTA-DTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSW 205 (263)
Q Consensus 127 ~d~~~~~~li~ra~~aG~~al~vTv-D~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 205 (263)
.|.....+.++.+.++|++.+-+.+ |-+.. | .-....
T Consensus 20 ~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~-------------~-----------------------------~~~~~~ 57 (230)
T 1rpx_A 20 ANFSKLGEQVKAIEQAGCDWIHVDVMDGRFV-------------P-----------------------------NITIGP 57 (230)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSS-------------S-----------------------------CBCCCH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeeccCCcc-------------c-----------------------------ccccCH
Confidence 4555667778889999988877765 32210 0 012345
Q ss_pred HHHHHHHhhcCCCEEEEe-cCCHH-HHHHHHHcCCCEEEEcCC
Q 039466 206 KDIEWLRSITNLPILIKG-VLTRE-DAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKG-I~s~e-DA~~a~~~G~dgI~VSNH 246 (263)
+.+++|++.++.|+.+-- |..++ .++.+.++|+|+|.|...
T Consensus 58 ~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 58 LVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp HHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEec
Confidence 788899998888887766 44554 688888999999987544
No 211
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=89.07 E-value=0.44 Score=42.81 Aligned_cols=41 Identities=24% Similarity=0.269 Sum_probs=31.7
Q ss_pred HHHHHHHHhhcCCCEEEE---------ecCCHHH----HHHHHHcCCCEEEEcCC
Q 039466 205 WKDIEWLRSITNLPILIK---------GVLTRED----AIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilK---------GI~s~eD----A~~a~~~G~dgI~VSNH 246 (263)
-+-++.+|+.++.||.+| |. +.+| |+.+.+.|+|+|.||+-
T Consensus 198 ~eiv~avr~~v~~pv~vris~~~~~~~g~-~~~~~~~~a~~l~~~Gvd~i~v~~~ 251 (338)
T 1z41_A 198 REIIDEVKQVWDGPLFVRVSASDYTDKGL-DIADHIGFAKWMKEQGVDLIDCSSG 251 (338)
T ss_dssp HHHHHHHHHHCCSCEEEEEECCCCSTTSC-CHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHHcCCcEEEEecCcccCCCCC-CHHHHHHHHHHHHHcCCCEEEEecC
Confidence 356888999999999999 43 3444 45556789999999873
No 212
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=89.02 E-value=6.7 Score=33.87 Aligned_cols=146 Identities=14% Similarity=0.111 Sum_probs=77.3
Q ss_pred ChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc-cccCHHH-HHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhh
Q 039466 88 PEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA-AYKKRDM-AATLVQRAERNGFMALVLTADTPRLDRREADIKN 165 (263)
Q Consensus 88 ~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~-~~~d~~~-~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~ 165 (263)
.++-..+.+.+++.|+|++..-....+++.+.+..+- ...-+.. ...+++.+.+.|..-++ .....+. ..++.+
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~~kIga~~~~n~~ll~~~a~~~kPV~l---k~G~~~t-~~e~~~ 148 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKYSDILQIGARNSQNFELLKEVGKVENPVLL---KRGMGNT-IQELLY 148 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHTTSSSCEEE---ECCTTCC-HHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhhCCEEEECcccccCHHHHHHHHhcCCcEEE---ecCCCCC-HHHHHH
Confidence 4566688999999999999888888888888776331 1111111 12445555444433222 3222111 222322
Q ss_pred hhhhhhhhhhh--hccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEec--CC-----HHHHHHHHHc
Q 039466 166 KMIAQQLKNLE--GLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKGV--LT-----REDAIKAVEV 236 (263)
Q Consensus 166 ~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKGI--~s-----~eDA~~a~~~ 236 (263)
....- .... .+.. +..+. ..........++-..+..+++..++|||+=== .+ +.-++.|+..
T Consensus 149 Av~~i--~~~Gn~~i~L--~~RG~-----~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~~~~v~~~~~aAva~ 219 (262)
T 1zco_A 149 SAEYI--MAQGNENVIL--CERGI-----RTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAKAAYAI 219 (262)
T ss_dssp HHHHH--HTTTCCCEEE--EECCB-----CCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCSGGGHHHHHHHHHHT
T ss_pred HHHHH--HHCCCCeEEE--EECCC-----CCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCccchHHHHHHHHHHc
Confidence 21110 0000 0000 00000 00001122334556789999999999765311 11 2457778899
Q ss_pred CCCEEEEcCC
Q 039466 237 GVAGIIVSNH 246 (263)
Q Consensus 237 G~dgI~VSNH 246 (263)
|++|+++=-|
T Consensus 220 Ga~Gl~iE~H 229 (262)
T 1zco_A 220 GADGIMVEVH 229 (262)
T ss_dssp TCSEEEEEBC
T ss_pred CCCEEEEEec
Confidence 9999999999
No 213
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=88.93 E-value=0.68 Score=37.96 Aligned_cols=42 Identities=17% Similarity=0.113 Sum_probs=35.1
Q ss_pred HHHHHHHhhc-CCCEEE--EecCC-HHH-HHHHHHcCCCEEEEcCCCC
Q 039466 206 KDIEWLRSIT-NLPILI--KGVLT-RED-AIKAVEVGVAGIIVSNHGA 248 (263)
Q Consensus 206 ~dl~~lr~~~-~lPiil--KGI~s-~eD-A~~a~~~G~dgI~VSNHGG 248 (263)
+.+++||+.+ +.||++ | +.+ +++ ++.+.++|+|+|.|.--.|
T Consensus 42 ~~i~~l~~~~~~~~i~~~l~-~~di~~~~~~~a~~~Gad~v~vh~~~~ 88 (207)
T 3ajx_A 42 SVITAVKKAHPDKIVFADMK-TMDAGELEADIAFKAGADLVTVLGSAD 88 (207)
T ss_dssp HHHHHHHHHSTTSEEEEEEE-ECSCHHHHHHHHHHTTCSEEEEETTSC
T ss_pred HHHHHHHHhCCCCeEEEEEE-ecCccHHHHHHHHhCCCCEEEEeccCC
Confidence 5689999998 789986 8 778 888 9999999999999865544
No 214
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=88.81 E-value=1.1 Score=37.88 Aligned_cols=35 Identities=23% Similarity=0.172 Sum_probs=27.1
Q ss_pred HHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEE
Q 039466 208 IEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGII 242 (263)
Q Consensus 208 l~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~ 242 (263)
|+.+++..+-=++.-| |++.|++..|+++|+|+|+
T Consensus 68 i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~ 103 (225)
T 1mxs_A 68 IQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVV 103 (225)
T ss_dssp HHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEE
T ss_pred HHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEE
Confidence 6667777653344455 6899999999999999995
No 215
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=88.55 E-value=0.87 Score=40.72 Aligned_cols=46 Identities=13% Similarity=0.218 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE--cCCCC
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV--SNHGA 248 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V--SNHGG 248 (263)
.-+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|.+ +. ||
T Consensus 221 ~~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GG 270 (345)
T 2zad_A 221 REDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMK-SG 270 (345)
T ss_dssp TTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHH-HH
T ss_pred cccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEeccc-cc
Confidence 3578999999999999999988 78999999999876 888877 55 65
No 216
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=88.19 E-value=0.6 Score=39.48 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=30.7
Q ss_pred HHHHHHHhhcCCCEEEEec-----CCHHH----HHHHHHcCCCEEEEcC
Q 039466 206 KDIEWLRSITNLPILIKGV-----LTRED----AIKAVEVGVAGIIVSN 245 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKGI-----~s~eD----A~~a~~~G~dgI~VSN 245 (263)
++|+.+++..+ |+++|-| ++.++ ++.+.++|+|+|.+|.
T Consensus 106 ~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tst 153 (225)
T 1mzh_A 106 EELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTST 153 (225)
T ss_dssp HHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECC
Confidence 56889999988 9999985 56655 6777788999995443
No 217
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=87.98 E-value=0.4 Score=39.77 Aligned_cols=40 Identities=10% Similarity=0.188 Sum_probs=32.4
Q ss_pred HHHHHHHhhc-----CCCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 206 KDIEWLRSIT-----NLPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 206 ~dl~~lr~~~-----~lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.++++|+.. +.||++=|=.+++++..+.++|+|+|+|+.
T Consensus 155 ~~i~~~~~~~~~~~~~~~i~v~GGI~~~~~~~~~~~Gad~vvvGs 199 (220)
T 2fli_A 155 EKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAGS 199 (220)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHHHTCCEEEESH
T ss_pred HHHHHHHHHHHhcCCCceEEEECcCCHHHHHHHHHcCCCEEEECh
Confidence 5577788766 789888774448999999999999999974
No 218
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=87.91 E-value=0.67 Score=43.53 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=35.6
Q ss_pred CHHHHHHHHh---hcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRS---ITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~---~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.+.+++++. ..++|||.-| |.+++|+.+|+.+||+++++..
T Consensus 321 ~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v~vG~ 366 (491)
T 1zfj_A 321 QVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGS 366 (491)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred cHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCcceeeCH
Confidence 4566667665 4789999988 9999999999999999999943
No 219
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=87.89 E-value=1.6 Score=38.52 Aligned_cols=73 Identities=26% Similarity=0.286 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..++++++..+.|++.|++.--+-- ...+++++
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v~GttGE--------------------------------------------~~~Ls~~E 61 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVPVGTTGE--------------------------------------------SATLTHEE 61 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECSSTTTT--------------------------------------------GGGSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccC--------------------------------------------hhhCCHHH
Confidence 6677888999988999999886443211 02344443
Q ss_pred ----HHHHHhhc---CCCEEEEecC--CH----HHHHHHHHcCCCEEEEcC
Q 039466 208 ----IEWLRSIT---NLPILIKGVL--TR----EDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 208 ----l~~lr~~~---~lPiilKGI~--s~----eDA~~a~~~G~dgI~VSN 245 (263)
++..++.. ++|||+ |+- +- +-++.|.+.|+|||+|..
T Consensus 62 r~~v~~~~~~~~~g~rvpvia-Gvg~~~t~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 62 HRTCIEIAVETCKGTKVKVLA-GAGSNATHEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHHHHHTTSSCEEEE-ECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHhCCCCCeEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 33344443 579988 883 34 445567789999999864
No 220
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=87.60 E-value=2.2 Score=37.50 Aligned_cols=74 Identities=18% Similarity=0.174 Sum_probs=48.5
Q ss_pred cCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHH
Q 039466 127 KKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWK 206 (263)
Q Consensus 127 ~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 206 (263)
-|.+..+++++...+.|++.|++.--+-- ...++++
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~GttGE--------------------------------------------~~~Ls~~ 60 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVGTTGE--------------------------------------------SATLSVE 60 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTT--------------------------------------------GGGSCHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccC--------------------------------------------cccCCHH
Confidence 36677889999988999999886443311 0234444
Q ss_pred H----HHHHHhhc--CCCEEEEecC--CH----HHHHHHHHcCCCEEEEcC
Q 039466 207 D----IEWLRSIT--NLPILIKGVL--TR----EDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 207 d----l~~lr~~~--~lPiilKGI~--s~----eDA~~a~~~G~dgI~VSN 245 (263)
+ ++..++.. ++|||+ ||. +. +-++.|.++|+||++|..
T Consensus 61 Er~~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 61 EHTAVIEAVVKHVAKRVPVIA-GTGANNTVEAIALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp HHHHHHHHHHHHHTTSSCEEE-ECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCcEEE-eCCCcCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3 33334433 489998 883 34 445667789999998864
No 221
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=87.58 E-value=0.43 Score=40.06 Aligned_cols=44 Identities=30% Similarity=0.357 Sum_probs=34.9
Q ss_pred CCCH---HHHHHHHhhc-----CCCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 202 SLSW---KDIEWLRSIT-----NLPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 202 ~~~W---~dl~~lr~~~-----~lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+.| +.++++|+.. ++|+++=|=.+++++..++++|+|+|+|+.
T Consensus 157 ~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~aGad~vvvgS 208 (230)
T 1rpx_A 157 SFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGANALVAGS 208 (230)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHTCCEEEESH
T ss_pred cccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHcCCCEEEECh
Confidence 3455 5678888877 799887773448999999999999999974
No 222
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=87.55 E-value=0.88 Score=39.71 Aligned_cols=40 Identities=20% Similarity=0.302 Sum_probs=31.8
Q ss_pred HHHHHHHHhhcCCCEEEEe----cC---CHHHHHHHHHcCCCEEEEc
Q 039466 205 WKDIEWLRSITNLPILIKG----VL---TREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKG----I~---s~eDA~~a~~~G~dgI~VS 244 (263)
.+.++.+|+..++||++=+ |. ....++.|.++|+||+++.
T Consensus 80 ~~~v~~ir~~~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~ 126 (271)
T 1ujp_A 80 LELVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILP 126 (271)
T ss_dssp HHHHHHHHHHCCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECT
T ss_pred HHHHHHHHhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEec
Confidence 4669999999999999943 32 1456788999999999985
No 223
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=87.31 E-value=0.84 Score=39.90 Aligned_cols=39 Identities=21% Similarity=0.147 Sum_probs=34.6
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEE
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGII 242 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~ 242 (263)
+.+.|+.+++.+++|++++. +.+.++++.+.++|+|+|.
T Consensus 66 ~~~~i~~i~~~~~~Pvi~~~~~~~~~~~~~~~~aGad~v~ 105 (297)
T 2zbt_A 66 DPKIIKEIMAAVSIPVMAKVRIGHFVEAMILEAIGVDFID 105 (297)
T ss_dssp CHHHHHHHHTTCSSCEEEEEETTCHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHCCCCEEe
Confidence 45789999999999999985 6789999999999999993
No 224
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=86.87 E-value=0.87 Score=40.46 Aligned_cols=147 Identities=15% Similarity=0.222 Sum_probs=75.0
Q ss_pred CCcccCCChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc------cccCHHHHHHHHHHHHHcCCCEEEEccCCC
Q 039466 81 GLHKLANPEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA------AYKKRDMAATLVQRAERNGFMALVLTADTP 154 (263)
Q Consensus 81 ~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~------~~~d~~~~~~li~ra~~aG~~al~vTvD~~ 154 (263)
+++++.-.+|=..+.+.|++.|++++..-....+++.+.+..+- -.+|- .+++.+.+.|.. |-+...
T Consensus 91 sf~Glg~~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~vd~lkIgA~~~~n~----~LLr~va~~gkP---VilK~G 163 (298)
T 3fs2_A 91 AARGIGLEKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPVVDVLQIPAFLCRQT----DLLIAAARTGRV---VNVKKG 163 (298)
T ss_dssp ----CCHHHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTTCSEEEECGGGTTCH----HHHHHHHHTTSE---EEEECC
T ss_pred CcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhCCEEEECccccCCH----HHHHHHHccCCc---EEEeCC
Confidence 34444223455578999999999998777776777777655321 22343 356666555542 222322
Q ss_pred CCcchHHHHhhhhhhhhhhhhhhccccCCCC-CCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEE-----------
Q 039466 155 RLDRREADIKNKMIAQQLKNLEGLLSTKVTS-DTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIK----------- 222 (263)
Q Consensus 155 ~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilK----------- 222 (263)
.. --..|+.+.... +.... ..++-- .... .| ...+..++...|..+|+ +++||++-
T Consensus 164 ms-~t~~ei~~ave~--i~~~G---n~~iiL~erg~---~y--~~~~~~vdl~~i~~lk~-~~~PV~~D~sHsvq~p~~~ 231 (298)
T 3fs2_A 164 QF-LAPWDMKNVLAK--ITESG---NPNVLATERGV---SF--GYNTLVSDMRALPIMAG-LGAPVIFDATHSVQQPGGQ 231 (298)
T ss_dssp TT-CCGGGHHHHHHH--HHTTT---CCCEEEEECCE---EC--SSSCEECCTTHHHHHHT-TTSCEEEEHHHHTCCCC--
T ss_pred CC-CCHHHHHHHHHH--HHHcC---CCeEEEEECCC---CC--CCCCCccCHHHHHHHHH-cCCcEEEcCCCccccCCcc
Confidence 21 011122211110 00000 000000 0000 01 00111246778999999 89999993
Q ss_pred -----ec--CCHHHHHHHHHcCCCEEEEcCC
Q 039466 223 -----GV--LTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 223 -----GI--~s~eDA~~a~~~G~dgI~VSNH 246 (263)
|. +-+.-|+.|+.+|+||++|=-|
T Consensus 232 ~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H 262 (298)
T 3fs2_A 232 GGSTGGQREFVETLARAAVAVGVAGFFIETH 262 (298)
T ss_dssp ------CGGGHHHHHHHHHHHCCSEEEEEEE
T ss_pred cCCCCCchhhHHHHHHHHHHcCCCEEEEEec
Confidence 21 1256788999999999998666
No 225
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=86.85 E-value=1.1 Score=38.28 Aligned_cols=44 Identities=16% Similarity=0.334 Sum_probs=39.9
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcCC
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSNH 246 (263)
...+-++.+.+.+.+|+-+=| |-+.||+++.++.|++-|++...
T Consensus 62 ~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~ 106 (243)
T 4gj1_A 62 RQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSM 106 (243)
T ss_dssp CCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTT
T ss_pred hHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccc
Confidence 456789999999999999988 99999999999999999998764
No 226
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=86.59 E-value=4 Score=35.18 Aligned_cols=28 Identities=25% Similarity=0.099 Sum_probs=21.8
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCCEEEE
Q 039466 216 NLPILIKGVLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 216 ~lPiilKGI~s~eDA~~a~~~G~dgI~V 243 (263)
++.++.--+-+.+.++++.+.|++.|+.
T Consensus 126 g~~vi~~~~~~~~~a~~~~~~gad~v~~ 153 (264)
T 1xm3_A 126 GFIVLPYTSDDVVLARKLEELGVHAIMP 153 (264)
T ss_dssp TCCEEEEECSCHHHHHHHHHHTCSCBEE
T ss_pred CeEEEEEcCCCHHHHHHHHHhCCCEEEE
Confidence 5566544556889999999999999844
No 227
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=86.51 E-value=0.4 Score=41.46 Aligned_cols=41 Identities=5% Similarity=0.087 Sum_probs=34.2
Q ss_pred CCHHHHHHHHhhc-----CCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 203 LSWKDIEWLRSIT-----NLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 203 ~~W~dl~~lr~~~-----~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
.+.+.+.+|++.. ++|+|.-| |.|++|+.++.+ |++|++|.
T Consensus 190 ~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVG 236 (254)
T 1vc4_A 190 INLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIG 236 (254)
T ss_dssp BCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEEC
T ss_pred CCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEe
Confidence 3556677777766 68998766 999999999999 99999985
No 228
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=86.16 E-value=0.4 Score=43.23 Aligned_cols=41 Identities=29% Similarity=0.325 Sum_probs=30.8
Q ss_pred HHHHHHHHhhcCCCEEEEec--------CCHHH----HHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSITNLPILIKGV--------LTRED----AIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKGI--------~s~eD----A~~a~~~G~dgI~VSN 245 (263)
-+-++.+|+.++.||.+|== .+.+| |+.+.+.|+|.|.||+
T Consensus 198 ~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 250 (340)
T 3gr7_A 198 GEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSS 250 (340)
T ss_dssp HHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 46688999999999999821 12333 5566679999999997
No 229
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=86.14 E-value=2.5 Score=37.01 Aligned_cols=73 Identities=18% Similarity=0.296 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..+++++...+.|++.|++.=-+-- ...+++++
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE--------------------------------------------~~~Ls~~E 55 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVGTTGE--------------------------------------------ASTLSMEE 55 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTT--------------------------------------------GGGSCHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccc--------------------------------------------cccCCHHH
Confidence 6677888899888899998875433211 02345543
Q ss_pred ----HHHHHhhc--CCCEEEEecC--CHHH----HHHHHHcCCCEEEEcC
Q 039466 208 ----IEWLRSIT--NLPILIKGVL--TRED----AIKAVEVGVAGIIVSN 245 (263)
Q Consensus 208 ----l~~lr~~~--~lPiilKGI~--s~eD----A~~a~~~G~dgI~VSN 245 (263)
++..++.. ++|||+ |+. +.++ ++.|.++|+|||+|..
T Consensus 56 r~~v~~~~~~~~~gr~pvia-Gvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 56 HTQVIKEIIRVANKRIPIIA-GTGANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHHHHTTSSCEEE-ECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHHhCCCCeEEE-eCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 33333433 489988 883 4444 5567789999999864
No 230
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=86.09 E-value=16 Score=31.98 Aligned_cols=79 Identities=13% Similarity=0.091 Sum_probs=47.1
Q ss_pred cceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc-------c-ccCHHHH
Q 039466 73 ASIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA-------A-YKKRDMA 132 (263)
Q Consensus 73 ~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~-------~-~~d~~~~ 132 (263)
.|.++.|+.-.+-.+.++-..+++-.-+.|+- +++||.+ +.|.|| +.+...+ + -.+-..+
T Consensus 20 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~a 99 (304)
T 3l21_A 20 LTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHS 99 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHH
T ss_pred EEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHH
Confidence 45556666543333444445667666677764 4455544 245554 2222222 1 2355678
Q ss_pred HHHHHHHHHcCCCEEEEcc
Q 039466 133 ATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 133 ~~li~ra~~aG~~al~vTv 151 (263)
.++.+.|+++|++++++..
T Consensus 100 i~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 100 IRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 8899999999999998864
No 231
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=86.06 E-value=0.64 Score=39.14 Aligned_cols=40 Identities=23% Similarity=0.254 Sum_probs=33.5
Q ss_pred HHHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 206 KDIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 206 ~dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.++++|+.. ++||++=|=.+++++..++++|+|+|+|..
T Consensus 162 ~~i~~~~~~~~~~pi~v~GGI~~~ni~~~~~aGaD~vvvGs 202 (228)
T 1h1y_A 162 EKVRALRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGS 202 (228)
T ss_dssp HHHHHHHHHCTTSEEEEESSCSTTTHHHHHHHTCCEEEESH
T ss_pred HHHHHHHHhcCCCCEEEECCcCHHHHHHHHHcCCCEEEECH
Confidence 5678888888 899998884455899999999999999863
No 232
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=86.02 E-value=0.86 Score=42.91 Aligned_cols=41 Identities=17% Similarity=0.255 Sum_probs=35.1
Q ss_pred HHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcCC
Q 039466 206 KDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSNH 246 (263)
..+..+++..++|||.-| |.+..|+.+|+.+|||++.+...
T Consensus 318 ~~~~~~~~~~~vpVia~GGi~~~~di~kalalGA~~v~~g~~ 359 (486)
T 2cu0_A 318 AMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGADAVMLGNL 359 (486)
T ss_dssp HHHHHHHHHHTCEEEEESCCCSHHHHHHHHHTTCSEEEESTT
T ss_pred HHHHHHHHHcCCcEEecCCCCCHHHHHHHHHcCCCceeeChh
Confidence 345667777789999986 99999999999999999999653
No 233
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=85.79 E-value=1.3 Score=39.83 Aligned_cols=41 Identities=24% Similarity=0.353 Sum_probs=31.8
Q ss_pred HHHHHHHHhhc--CCCEEEEec--------CCHHH----HHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSIT--NLPILIKGV--------LTRED----AIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~--~lPiilKGI--------~s~eD----A~~a~~~G~dgI~VSN 245 (263)
-+-++.+|+.+ +.||.+|== .+.+| |+.+.+.|+|.|.||+
T Consensus 206 ~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 206 LQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp HHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 35688999998 689999821 35677 5666678999999997
No 234
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=85.66 E-value=2.2 Score=40.85 Aligned_cols=44 Identities=9% Similarity=0.039 Sum_probs=36.6
Q ss_pred CCCCHHHHHHHHhhc------CCCEEEEe-cCCHHHHHHHHH--------cCCCEEEEcC
Q 039466 201 PSLSWKDIEWLRSIT------NLPILIKG-VLTREDAIKAVE--------VGVAGIIVSN 245 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~------~lPiilKG-I~s~eDA~~a~~--------~G~dgI~VSN 245 (263)
+.+.|+.++++++.+ ++|++.=| | +++++..+++ .|++||.|..
T Consensus 152 ~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~~~~g~~~GadgvAVvs 210 (540)
T 3nl6_A 152 APMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQCVSSNGKRSLDGICVVS 210 (540)
T ss_dssp CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHCBCTTSSCBCSCEEESH
T ss_pred CCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhhcccccccCceEEEEeH
Confidence 346788888888764 89999998 6 8999999998 8999998863
No 235
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=85.49 E-value=2.8 Score=37.00 Aligned_cols=73 Identities=18% Similarity=0.244 Sum_probs=48.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..++++++..+.|++.|++.=-+-- ...+++++
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~GttGE--------------------------------------------~~~Lt~~E 69 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSGTTGE--------------------------------------------SPTTTDGE 69 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTT--------------------------------------------GGGSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccc--------------------------------------------hhhCCHHH
Confidence 6677889999999999999886543311 02344443
Q ss_pred ----HHHHHhhc--CCCEEEEec--CCH----HHHHHHHHcCCCEEEEcC
Q 039466 208 ----IEWLRSIT--NLPILIKGV--LTR----EDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 208 ----l~~lr~~~--~lPiilKGI--~s~----eDA~~a~~~G~dgI~VSN 245 (263)
++..++.. ++|||+ || .+- +-++.|.++|+|||+|..
T Consensus 70 r~~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 70 KIELLRAVLEAVGDRARVIA-GAGTYDTAHSIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHHHHHHHTTTSEEEE-ECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHHhCCCCeEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 33344443 479988 88 344 445666779999999864
No 236
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=85.43 E-value=2.4 Score=37.68 Aligned_cols=73 Identities=18% Similarity=0.309 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..++++++..+.|++.|++.=-+-- ...+++++
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~GtTGE--------------------------------------------~~~Ls~~E 76 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVGTTGE--------------------------------------------SPTLTHEE 76 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSTTTT--------------------------------------------GGGSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccC--------------------------------------------ccccCHHH
Confidence 6677888999988999999875333210 02345543
Q ss_pred ----HHHHHhhc--CCCEEEEecC--CHHH----HHHHHHcCCCEEEEcC
Q 039466 208 ----IEWLRSIT--NLPILIKGVL--TRED----AIKAVEVGVAGIIVSN 245 (263)
Q Consensus 208 ----l~~lr~~~--~lPiilKGI~--s~eD----A~~a~~~G~dgI~VSN 245 (263)
++..++.. ++|||+ ||- +-++ ++.|.+.|+|||+|..
T Consensus 77 r~~v~~~~v~~~~grvpVia-Gvg~~st~~ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 77 HKRIIELCVEQVAKRVPVVA-GAGSNSTSEAVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HHHHHHHHHHHHTTSSCBEE-ECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHhCCCCcEEE-eCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 33334433 489998 883 4444 5567789999998864
No 237
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=85.39 E-value=0.93 Score=43.56 Aligned_cols=42 Identities=12% Similarity=0.139 Sum_probs=35.6
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCH-----------HHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTR-----------EDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~-----------eDA~~a~~~G~dgI~VSN 245 (263)
+.+.|+.+++.+.+||++=| |-+. |+|+.++++|||-|+|..
T Consensus 315 ~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~V~igt 368 (555)
T 1jvn_A 315 MLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGT 368 (555)
T ss_dssp HHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEEEECH
T ss_pred HHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcCCCEEEECC
Confidence 34678889899999999988 8787 559999999999998863
No 238
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=85.37 E-value=3.6 Score=36.82 Aligned_cols=74 Identities=15% Similarity=0.145 Sum_probs=48.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..++++++..+.|++.|++.--+-- ...+++++
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE--------------------------------------------~~~Ls~eE 88 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGSTGI--------------------------------------------YMYLTREE 88 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESSTTTT--------------------------------------------GGGSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccC--------------------------------------------hhhCCHHH
Confidence 6677889999988899999886443311 02344433
Q ss_pred ----HHHHHhhc--CCCEEEEecC--C----HHHHHHHHHcCCCEEEEcCC
Q 039466 208 ----IEWLRSIT--NLPILIKGVL--T----REDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 208 ----l~~lr~~~--~lPiilKGI~--s----~eDA~~a~~~G~dgI~VSNH 246 (263)
++..++.. ++|||+ ||- + .+-++.|.++|+|||+|..-
T Consensus 89 r~~vi~~~ve~~~grvpVia-Gvg~~st~eai~la~~A~~~Gadavlv~~P 138 (332)
T 2r8w_A 89 RRRAIEAAATILRGRRTLMA-GIGALRTDEAVALAKDAEAAGADALLLAPV 138 (332)
T ss_dssp HHHHHHHHHHHHTTSSEEEE-EECCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHhCCCCcEEE-ecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 33344443 488887 873 3 44456667799999998643
No 239
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=85.36 E-value=1.4 Score=38.98 Aligned_cols=46 Identities=13% Similarity=-0.043 Sum_probs=35.9
Q ss_pred CCHHHHHHHHhhcCCCEEEEecC---CH-HHHHHHHHcCCCEEEEcCCCC
Q 039466 203 LSWKDIEWLRSITNLPILIKGVL---TR-EDAIKAVEVGVAGIIVSNHGA 248 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKGI~---s~-eDA~~a~~~G~dgI~VSNHGG 248 (263)
.+|+.++.+.+.+++|++++.+. ++ -+...+.+.|++.|++.+++=
T Consensus 190 ~~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~ 239 (295)
T 1xg4_A 190 TELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAF 239 (295)
T ss_dssp CSHHHHHHHHHHHCSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHH
Confidence 36899999999999999887752 22 245667789999999988743
No 240
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=85.34 E-value=1.8 Score=38.54 Aligned_cols=73 Identities=18% Similarity=0.223 Sum_probs=47.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..++++++..+.|++.|++.--+-- ...+++++
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~GtTGE--------------------------------------------~~~Ls~~E 78 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGSTGE--------------------------------------------GAYLSDPE 78 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGT--------------------------------------------GGGSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccC--------------------------------------------hhhCCHHH
Confidence 6677888999988999988875332110 02345543
Q ss_pred ----HHHHHhhc--CCCEEEEecC--CHHH----HHHHHHcCCCEEEEcC
Q 039466 208 ----IEWLRSIT--NLPILIKGVL--TRED----AIKAVEVGVAGIIVSN 245 (263)
Q Consensus 208 ----l~~lr~~~--~lPiilKGI~--s~eD----A~~a~~~G~dgI~VSN 245 (263)
++..++.. ++|||+ ||- +-+| ++.|.++|+|||+|..
T Consensus 79 r~~v~~~~v~~~~grvpVia-Gvg~~~t~~ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 79 WDEVVDFTLKTVAHRVPTIV-SVSDLTTAKTVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp HHHHHHHHHHHHTTSSCBEE-ECCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHhCCCCcEEE-ecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 33344433 589998 883 4444 5567789999999864
No 241
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=85.19 E-value=1.3 Score=40.20 Aligned_cols=43 Identities=19% Similarity=0.197 Sum_probs=37.9
Q ss_pred CCCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 201 PSLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
+..+|+.+++|++.+++||+.=| +.+++|++++++.| +|.|.+
T Consensus 226 ~~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~i 270 (384)
T 2pgw_A 226 VSWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICI 270 (384)
T ss_dssp CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEE
Confidence 34589999999999999999999 78999999999975 888865
No 242
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=85.09 E-value=2.8 Score=34.45 Aligned_cols=44 Identities=9% Similarity=0.034 Sum_probs=34.7
Q ss_pred CHHHHHHHHhhcCCCEEEEec-CCHH-HHHHHHHcCCCEEEEcCCC
Q 039466 204 SWKDIEWLRSITNLPILIKGV-LTRE-DAIKAVEVGVAGIIVSNHG 247 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKGI-~s~e-DA~~a~~~G~dgI~VSNHG 247 (263)
..+.+++|++.++.|+.+-+. .+++ ..+.+.++|+|+|.|..-.
T Consensus 49 g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~ 94 (220)
T 2fli_A 49 GADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTES 94 (220)
T ss_dssp CHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGG
T ss_pred CHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCc
Confidence 468899999998889988874 5554 5788889999999885433
No 243
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=84.97 E-value=2.2 Score=37.85 Aligned_cols=74 Identities=15% Similarity=0.211 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..+++++...+.|+++|++.--+-- ...+++++
T Consensus 27 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE--------------------------------------------~~~Lt~~E 62 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEVGCEGVTVLGILGE--------------------------------------------APKLDAAE 62 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESTGGGT--------------------------------------------GGGSCHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEeCccCcC--------------------------------------------hhhCCHHH
Confidence 6677889999998999999886432210 02334433
Q ss_pred ----HHHHHhhc-CCCEEEEecC--C----HHHHHHHHHcCCCEEEEcCC
Q 039466 208 ----IEWLRSIT-NLPILIKGVL--T----REDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 208 ----l~~lr~~~-~lPiilKGI~--s----~eDA~~a~~~G~dgI~VSNH 246 (263)
++..++.. ++|||+ ||- + .+-++.|.++|+||++|..-
T Consensus 63 r~~v~~~~v~~~grvpVia-Gvg~~~t~~ai~la~~A~~~Gadavlv~~P 111 (313)
T 3dz1_A 63 AEAVATRFIKRAKSMQVIV-GVSAPGFAAMRRLARLSMDAGAAGVMIAPP 111 (313)
T ss_dssp HHHHHHHHHHHCTTSEEEE-ECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHcCCCcEEE-ecCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 33344443 589988 883 3 44456677899999998643
No 244
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=84.96 E-value=4.7 Score=35.81 Aligned_cols=79 Identities=20% Similarity=0.303 Sum_probs=58.2
Q ss_pred cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCC
Q 039466 125 AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLS 204 (263)
Q Consensus 125 ~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (263)
.+.|++...+.++ +.|+++|.+.+-+... . | . ....+.++
T Consensus 151 ~yT~Peea~~Fv~---~TgvD~LAvaiGt~HG-~--------Y----------------k------------~~g~p~L~ 190 (305)
T 1rvg_A 151 LLTNPEEARIFME---RTGADYLAVAIGTSHG-A--------Y----------------K------------GKGRPFID 190 (305)
T ss_dssp TCCCHHHHHHHHH---HHCCSEEEECSSCCSS-S--------B----------------C------------SSSSCCCC
T ss_pred ccCCHHHHHHHHH---HHCCCEEEEecCcccc-c--------c----------------C------------CCCCCccC
Confidence 4566666655554 5799999998887531 1 0 0 00237799
Q ss_pred HHHHHHHHhhcCCCEEEEecC-----------------------CHHHHHHHHHcCCCEEEE
Q 039466 205 WKDIEWLRSITNLPILIKGVL-----------------------TREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKGI~-----------------------s~eDA~~a~~~G~dgI~V 243 (263)
++-|+.|++.+++|+|+=|=. ..|+.++|+++|+.=|=|
T Consensus 191 ~~~L~~I~~~~~vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiNi 252 (305)
T 1rvg_A 191 HARLERIARLVPAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLGIAKINT 252 (305)
T ss_dssp HHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEeCCCCCcHHHHHHHHhhccccccCCCCCHHHHHHHHHCCCeEEEE
Confidence 999999999999999999976 788888999998876644
No 245
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=84.95 E-value=4.7 Score=35.49 Aligned_cols=74 Identities=18% Similarity=0.161 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..++++++..+.|++.|++.--+-- . ..+++++
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE-------------~-------------------------------~~Ls~eE 65 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYVGGSTGE-------------A-------------------------------FVQSLSE 65 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTT-------------G-------------------------------GGSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECeeccC-------------h-------------------------------hhCCHHH
Confidence 6677889999998999999886433311 0 2344433
Q ss_pred ----HHHHHhhc--CCCEEEEecC--C----HHHHHHHHHcCCCEEEEcCC
Q 039466 208 ----IEWLRSIT--NLPILIKGVL--T----REDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 208 ----l~~lr~~~--~lPiilKGI~--s----~eDA~~a~~~G~dgI~VSNH 246 (263)
++..++.. ++|||+ ||- + .+-++.|.+.|+||++|..-
T Consensus 66 r~~v~~~~~~~~~grvpVia-Gvg~~~t~~ai~la~~A~~~Gadavlv~~P 115 (303)
T 2wkj_A 66 REQVLEIVAEEAKGKIKLIA-HVGCVSTAESQQLAASAKRYGFDAVSAVTP 115 (303)
T ss_dssp HHHHHHHHHHHHTTTSEEEE-ECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHHHHhCCCCcEEE-ecCCCCHHHHHHHHHHHHhCCCCEEEecCC
Confidence 33344433 478877 884 3 44456667799999988643
No 246
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=84.84 E-value=0.76 Score=41.94 Aligned_cols=41 Identities=22% Similarity=0.263 Sum_probs=33.4
Q ss_pred HHHHHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSIT-NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.+-|.+++... ++|||.-| |.++.|+.+|+.+|||+|.|..
T Consensus 266 ~~~L~~v~~~~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~ 308 (365)
T 3sr7_A 266 AQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSR 308 (365)
T ss_dssp HHHHHHHGGGTTTSEEEECSSCCSHHHHHHHHHHTCSEEEESH
T ss_pred HHHHHHHHHhcCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECH
Confidence 34555554432 68999998 9999999999999999999965
No 247
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=84.73 E-value=1.9 Score=38.12 Aligned_cols=148 Identities=19% Similarity=0.271 Sum_probs=77.4
Q ss_pred CCcccCCChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc------cccCHHHHHHHHHHHHHcCCCEEEEccCCC
Q 039466 81 GLHKLANPEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA------AYKKRDMAATLVQRAERNGFMALVLTADTP 154 (263)
Q Consensus 81 ~~~~l~~~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~------~~~d~~~~~~li~ra~~aG~~al~vTvD~~ 154 (263)
+++++.-.+|=..+.+.|++.|++++..-....+++.+.+..+- -.+|.+ +++.+.+.|...+ +...
T Consensus 67 sf~Glg~~~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~vd~lkIgA~~~~n~~----LLr~~a~~gkPVi---lK~G 139 (288)
T 3tml_A 67 SFRGLGMDEGLRILSEVKRQLGLPVLTDVHSIDEIEQVASVVDVLQTPAFLCRQTD----FIHACARSGKPVN---IKKG 139 (288)
T ss_dssp -----CHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHHCSEEEECGGGTTCHH----HHHHHHTSSSCEE---EECC
T ss_pred CcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCEEEECcccccCHH----HHHHHHccCCcEE---EeCC
Confidence 34444213455579999999999999888888888888776431 223443 5666555554322 2322
Q ss_pred CCcchHHHHhhhhhhhhhhhhhhc---cccCCCC-CCCccHHHHHHHhcCCC--CCHHHHHHHHhhcCCCEEEE------
Q 039466 155 RLDRREADIKNKMIAQQLKNLEGL---LSTKVTS-DTGSNLEAYAKETMDPS--LSWKDIEWLRSITNLPILIK------ 222 (263)
Q Consensus 155 ~~g~R~~d~r~~~~~p~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~--~~W~dl~~lr~~~~lPiilK------ 222 (263)
.. --..|+.+....- ...... ...++-- .... .| .... ++...|..+|+ +++||++-
T Consensus 140 ~~-~t~~e~~~ave~i--~~~Gn~~~~~~~~i~L~erg~---~y----~~~~~~vdl~~i~~lk~-~~~pV~~D~sHs~q 208 (288)
T 3tml_A 140 QF-LAPHDMKNVIDKA--RDAAREAGLSEDRFMACERGV---SF----GYNNLVSDMRSLAIMRE-TNAPVVFDATHSVQ 208 (288)
T ss_dssp TT-CCTTHHHHHHHHH--HHHHHTTTCCSCCEEEEECCE---EC----SSSCEECCHHHHHHGGG-GSSCEEEEHHHHTC
T ss_pred CC-CCHHHHHHHHHHH--HHcCCCccCCCCcEEEEeCCC---CC----CCCcCcCCHHHHHHHHh-cCCcEEEcCCcccc
Confidence 21 0112333222110 000000 0000000 0000 01 1122 37788999998 89999883
Q ss_pred ----------ec--CCHHHHHHHHHcCCCEEEEcCC
Q 039466 223 ----------GV--LTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 223 ----------GI--~s~eDA~~a~~~G~dgI~VSNH 246 (263)
|- +-+.-|+.|+.+|+||+++=-|
T Consensus 209 ~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~H 244 (288)
T 3tml_A 209 LPGGQGTSSGGQREFVPVLARAAVATGVAGLFMETH 244 (288)
T ss_dssp CCC--------CTTHHHHHHHHHHHHCCSEEEEEEE
T ss_pred cCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEeec
Confidence 21 1156688999999999999766
No 248
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=84.71 E-value=2.4 Score=37.64 Aligned_cols=73 Identities=19% Similarity=0.255 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..++++++..+.|++.|++.=-+-- ...+++++
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE--------------------------------------------~~~Ls~~E 77 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTTGE--------------------------------------------SATLDVEE 77 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGGGT--------------------------------------------GGGCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccC--------------------------------------------hhhCCHHH
Confidence 6677888999988999999886332210 02345543
Q ss_pred ----HHHHHhhc--CCCEEEEecC--CHHH----HHHHHHcCCCEEEEcC
Q 039466 208 ----IEWLRSIT--NLPILIKGVL--TRED----AIKAVEVGVAGIIVSN 245 (263)
Q Consensus 208 ----l~~lr~~~--~lPiilKGI~--s~eD----A~~a~~~G~dgI~VSN 245 (263)
++..++.. ++|||+ |+- +-++ ++.|.+.|+|||+|..
T Consensus 78 r~~v~~~~v~~~~grvpVia-Gvg~~st~eai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 78 HIQVIRRVVDQVKGRIPVIA-GTGANSTREAVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp HHHHHHHHHHHHTTSSCEEE-ECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHhCCCCcEEE-eCCCcCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 33333433 489988 883 3444 5566789999998864
No 249
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=84.55 E-value=0.67 Score=41.18 Aligned_cols=39 Identities=21% Similarity=0.400 Sum_probs=33.9
Q ss_pred CHHHHHHHHhh----cCCC-EEEEe-cCCHH----HHHHHHHcCCCEEEE
Q 039466 204 SWKDIEWLRSI----TNLP-ILIKG-VLTRE----DAIKAVEVGVAGIIV 243 (263)
Q Consensus 204 ~W~dl~~lr~~----~~lP-iilKG-I~s~e----DA~~a~~~G~dgI~V 243 (263)
+|+.++++.+. +++| |++=| + +.+ .+..+++.|++|++|
T Consensus 205 ~~~~~~~vv~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~v 253 (304)
T 1to3_A 205 ARSDLLTASQRLNGHINMPWVILSSGV-DEKLFPRAVRVAMEAGASGFLA 253 (304)
T ss_dssp CHHHHHHHHHHHHHTCCSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHhccccCCCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEE
Confidence 89999988888 8999 98888 6 664 488889999999998
No 250
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=84.49 E-value=2.7 Score=36.81 Aligned_cols=73 Identities=18% Similarity=0.340 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..+++++...+.|++.|++.--+-- . ..+++++
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE-------------~-------------------------------~~Lt~~E 56 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAE-------------S-------------------------------PTLTTDE 56 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGT-------------G-------------------------------GGSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccc-------------c-------------------------------ccCCHHH
Confidence 5667888888888999999886433210 0 2234433
Q ss_pred ----HHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCCEEEEcC
Q 039466 208 ----IEWLRSIT--NLPILIKGV--LTRED----AIKAVEVGVAGIIVSN 245 (263)
Q Consensus 208 ----l~~lr~~~--~lPiilKGI--~s~eD----A~~a~~~G~dgI~VSN 245 (263)
++..++.. ++|||+ || .+-++ ++.|.++|+||++|..
T Consensus 57 r~~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~~Gadavlv~~ 105 (292)
T 3daq_A 57 KELILKTVIDLVDKRVPVIA-GTGTNDTEKSIQASIQAKALGADAIMLIT 105 (292)
T ss_dssp HHHHHHHHHHHHTTSSCEEE-ECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHHhCCCCcEEE-eCCcccHHHHHHHHHHHHHcCCCEEEECC
Confidence 33334433 589988 88 34444 5567789999999864
No 251
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=84.25 E-value=3.1 Score=37.74 Aligned_cols=47 Identities=19% Similarity=0.305 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE--cCCCC
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV--SNHGA 248 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V--SNHGG 248 (263)
.-+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|.+ +.-||
T Consensus 231 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GG 281 (383)
T 3i4k_A 231 ADDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIALKTTKHGG 281 (383)
T ss_dssp TTCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTTTS
T ss_pred hhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEcccccCC
Confidence 3478999999999999999998 78999999999976 787765 44555
No 252
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=84.19 E-value=1.7 Score=36.51 Aligned_cols=36 Identities=11% Similarity=0.240 Sum_probs=31.2
Q ss_pred HHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEE
Q 039466 207 DIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 207 dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~V 243 (263)
++...++..+.|+++ |+.|++++.+|.+.|+|.|-+
T Consensus 100 ~v~~~~~~~g~~~i~-G~~t~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 100 PLLKAATEGTIPLIP-GISTVSELMLGMDYGLKEFKF 135 (214)
T ss_dssp HHHHHHHHSSSCEEE-EESSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCCEEE-ecCCHHHHHHHHHCCCCEEEE
Confidence 455566668888887 899999999999999999988
No 253
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=83.96 E-value=0.48 Score=39.90 Aligned_cols=45 Identities=18% Similarity=0.453 Sum_probs=36.8
Q ss_pred HHHHHHHHhhcCCCEEEEecCCHHH---------HHHHHHcCCCEEEEcCCCCCCC
Q 039466 205 WKDIEWLRSITNLPILIKGVLTRED---------AIKAVEVGVAGIIVSNHGARQL 251 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKGI~s~eD---------A~~a~~~G~dgI~VSNHGGRql 251 (263)
..+|..+++..++||+.|- .+..| +..+.++|||+|.| +|-=|.+
T Consensus 42 ~~~l~~v~~~~~~~v~aqd-~~~~~~ga~tGei~~~~~~~~Gad~Vll-~~ser~l 95 (219)
T 2h6r_A 42 FVDLRMIVENVNIPVYAQH-IDNINPGSHTGHILAEAIKDCGCKGTLI-NHSEKRM 95 (219)
T ss_dssp TTTHHHHHHHCCSCBEESC-CCSCCSBSCTTCCCHHHHHHHTCCEEEE-SBTTBCC
T ss_pred HHHHHHHHHHcCCcEEEEE-CChhhcCCccCchHHHHHHHcCCCEEEE-CCccccC
Confidence 4678889999999999988 44666 88999999999999 7765555
No 254
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=83.94 E-value=1.5 Score=39.93 Aligned_cols=44 Identities=14% Similarity=0.019 Sum_probs=38.6
Q ss_pred CCCHHHHHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcC-CCEEEEcCCCC
Q 039466 202 SLSWKDIEWLRSIT-NLPILIKG-VLTREDAIKAVEVG-VAGIIVSNHGA 248 (263)
Q Consensus 202 ~~~W~dl~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G-~dgI~VSNHGG 248 (263)
.-+|+.+++|++.+ ++||+.=| + +++|++++++.| +|.|.+- ||
T Consensus 229 ~~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik--GG 275 (389)
T 2oz8_A 229 RHDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADILNVH--GQ 275 (389)
T ss_dssp TTCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC--SC
T ss_pred CcCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC--cC
Confidence 34799999999999 99999999 7 999999999976 8888776 55
No 255
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=83.76 E-value=4.6 Score=35.57 Aligned_cols=100 Identities=16% Similarity=0.234 Sum_probs=64.2
Q ss_pred HHHHHHHHCCCceeecCCCCccHHHHHHhccccccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhh
Q 039466 93 ATARAAASCNTIMVLSFTSSCSIEEVAASCNAAYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQL 172 (263)
Q Consensus 93 a~AraA~~~gi~~~lss~s~~sieeV~~~~~~~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~ 172 (263)
.+-+.+++.|.|.++++..+.+++|+..+ ++.++..|..-+++.-=... | +
T Consensus 123 ~Ll~~~a~~~kPV~lk~G~~~t~~ei~~A--------------v~~i~~~Gn~~i~L~~rg~~-----------~--~-- 173 (292)
T 1o60_A 123 DLVEAMAKTGAVINVKKPQFLSPSQMGNI--------------VEKIEECGNDKIILCDRGTN-----------F--G-- 173 (292)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCGGGHHHH--------------HHHHHHTTCCCEEEEECCEE-----------C--S--
T ss_pred HHHHHHHcCCCcEEEeCCCCCCHHHHHHH--------------HHHHHHcCCCeEEEEECCCC-----------C--C--
Confidence 37777889999999999887677776544 34455677644443221000 0 0
Q ss_pred hhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhc-CCCEEE----------------Eec--CCHHHHHHH
Q 039466 173 KNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSIT-NLPILI----------------KGV--LTREDAIKA 233 (263)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~-~lPiil----------------KGI--~s~eDA~~a 233 (263)
......+-..|..+++.. ++||++ .|. +-..-++.|
T Consensus 174 -------------------------y~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aA 228 (292)
T 1o60_A 174 -------------------------YDNLIVDMLGFSVMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSG 228 (292)
T ss_dssp -------------------------TTCEECCTTHHHHHHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHH
T ss_pred -------------------------CCccccCHHHHHHHHhhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHH
Confidence 000113456677899988 899999 442 225667788
Q ss_pred HHcCCCEEEEcCC
Q 039466 234 VEVGVAGIIVSNH 246 (263)
Q Consensus 234 ~~~G~dgI~VSNH 246 (263)
+..|++|++|=-|
T Consensus 229 va~Ga~Gl~IE~H 241 (292)
T 1o60_A 229 LAVGIAGLFLEAH 241 (292)
T ss_dssp HHHCCSEEEEEEE
T ss_pred HHcCCCEEEEEec
Confidence 8899999999888
No 256
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=83.46 E-value=22 Score=30.90 Aligned_cols=77 Identities=16% Similarity=0.089 Sum_probs=42.8
Q ss_pred ceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc-------cc-cCHHHHH
Q 039466 74 SIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA-------AY-KKRDMAA 133 (263)
Q Consensus 74 Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~-------~~-~d~~~~~ 133 (263)
|.++.|+. .+-.+.++-..+++-.-+.|+- +++||.+ +.|.|| +.+...+ +- .+-..+.
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai 85 (294)
T 2ehh_A 7 VALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAV 85 (294)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHH
Confidence 44455655 4433444444666655566653 3344433 234444 1222222 11 2445677
Q ss_pred HHHHHHHHcCCCEEEEcc
Q 039466 134 TLVQRAERNGFMALVLTA 151 (263)
Q Consensus 134 ~li~ra~~aG~~al~vTv 151 (263)
++.+.|+++|++++++..
T Consensus 86 ~la~~A~~~Gadavlv~~ 103 (294)
T 2ehh_A 86 HLTAHAKEVGADGALVVV 103 (294)
T ss_dssp HHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHhcCCCEEEECC
Confidence 889999999999998874
No 257
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=83.20 E-value=12 Score=33.47 Aligned_cols=112 Identities=17% Similarity=0.126 Sum_probs=0.0
Q ss_pred HHHHHHHHHCCCceeecCCCCccHHHHHHhccccccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhh
Q 039466 92 VATARAAASCNTIMVLSFTSSCSIEEVAASCNAAYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQ 171 (263)
Q Consensus 92 ~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~ 171 (263)
....+.|++.|+....+-.... ..+++...+++++++++|+..|.+ .|+..... ..+++
T Consensus 123 ~~~i~~ak~~G~~v~~~~~~a~------------~~~~e~~~~ia~~~~~~Ga~~i~l-~DT~G~~~-P~~v~------- 181 (345)
T 1nvm_A 123 KQHIEYARNLGMDTVGFLMMSH------------MIPAEKLAEQGKLMESYGATCIYM-ADSGGAMS-MNDIR------- 181 (345)
T ss_dssp HHHHHHHHHHTCEEEEEEESTT------------SSCHHHHHHHHHHHHHHTCSEEEE-ECTTCCCC-HHHHH-------
T ss_pred HHHHHHHHHCCCEEEEEEEeCC------------CCCHHHHHHHHHHHHHCCCCEEEE-CCCcCccC-HHHHH-------
Q ss_pred hhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhc--CCCEEEEec----CCHHHHHHHHHcCCCEEE--E
Q 039466 172 LKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSIT--NLPILIKGV----LTREDAIKAVEVGVAGII--V 243 (263)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~--~lPiilKGI----~s~eDA~~a~~~G~dgI~--V 243 (263)
+-+++||+.+ ++||-+=.= +...-+..|+++||+-|. |
T Consensus 182 ----------------------------------~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~tv 227 (345)
T 1nvm_A 182 ----------------------------------DRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASL 227 (345)
T ss_dssp ----------------------------------HHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBG
T ss_pred ----------------------------------HHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEEecc
Q ss_pred cCCCCCCCCCchhhhccc
Q 039466 244 SNHGARQLDYTPATISAL 261 (263)
Q Consensus 244 SNHGGRqlD~~~~~i~~L 261 (263)
.+-||| ++-++++.|
T Consensus 228 ~GlG~~---aGN~~le~l 242 (345)
T 1nvm_A 228 AGMGAG---AGNAPLEVF 242 (345)
T ss_dssp GGCSST---TCBCBHHHH
T ss_pred hhccCC---ccCcCHHHH
No 258
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=83.20 E-value=4.2 Score=36.96 Aligned_cols=68 Identities=15% Similarity=0.204 Sum_probs=55.3
Q ss_pred cCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHH
Q 039466 127 KKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWK 206 (263)
Q Consensus 127 ~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 206 (263)
.|.+.+.+.+++.+++|++-+=+||.... .-+
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp~~~------------------------------------------------~a~ 74 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVPHKE------------------------------------------------DVE 74 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECCSHH------------------------------------------------HHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCCChH------------------------------------------------HHH
Confidence 57777888899999999999888876310 025
Q ss_pred HHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEE
Q 039466 207 DIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGII 242 (263)
Q Consensus 207 dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~ 242 (263)
.++.|++++++|++.===+++.-|..|+++|+|.+=
T Consensus 75 al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~dklR 110 (366)
T 3noy_A 75 ALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHGIR 110 (366)
T ss_dssp HHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCCCeEE
Confidence 688899999999998855999999999999999853
No 259
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=83.05 E-value=8.1 Score=33.04 Aligned_cols=45 Identities=20% Similarity=0.282 Sum_probs=37.0
Q ss_pred CCCCHHHHHHHHhhcC--CCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 201 PSLSWKDIEWLRSITN--LPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~~--lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+..+.++++-+|+.++ +||..-| |-+.+||...+++|++-|=+|+
T Consensus 183 ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~aGA~riGtS~ 230 (239)
T 3ngj_A 183 HGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNGASRIGASA 230 (239)
T ss_dssp CCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHTTEEEEEESC
T ss_pred CCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHhcccceeccc
Confidence 4567889999998765 5677767 9999999999999999876664
No 260
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=83.04 E-value=1.7 Score=39.67 Aligned_cols=47 Identities=6% Similarity=-0.055 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE--cCCCC
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV--SNHGA 248 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V--SNHGG 248 (263)
..+|+.+++|++.+++||+.=| +.+++|++++++.| +|.|.+ +-.||
T Consensus 231 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 281 (391)
T 2qgy_A 231 GENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGG 281 (391)
T ss_dssp TTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSC
T ss_pred hhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCC
Confidence 3589999999999999999999 78999999999876 788765 44455
No 261
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=82.99 E-value=11 Score=35.32 Aligned_cols=41 Identities=10% Similarity=0.174 Sum_probs=33.2
Q ss_pred CHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.+....|.+.. +.++|--| |.+++|++++.++ ++|++|..
T Consensus 194 dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVGe 237 (452)
T 1pii_A 194 DLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-ANGFLIGS 237 (452)
T ss_dssp CTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEEEECH
T ss_pred CHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcH
Confidence 567777777765 45677666 9999999999999 99999863
No 262
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=82.90 E-value=3.1 Score=37.02 Aligned_cols=74 Identities=20% Similarity=0.237 Sum_probs=47.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..+++++...+.|++.|++.=-+-- ...+++++
T Consensus 30 D~~~l~~lv~~li~~Gv~gl~v~GtTGE--------------------------------------------~~~Ls~~E 65 (318)
T 3qfe_A 30 DLASQERYYAYLARSGLTGLVILGTNAE--------------------------------------------AFLLTREE 65 (318)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEESSGGGT--------------------------------------------GGGSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccC--------------------------------------------hhhCCHHH
Confidence 5567888899988999999886433210 02344433
Q ss_pred ----HHHHHhhc--CCCEEEEecC--C----HHHHHHHHHcCCCEEEEcCC
Q 039466 208 ----IEWLRSIT--NLPILIKGVL--T----REDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 208 ----l~~lr~~~--~lPiilKGI~--s----~eDA~~a~~~G~dgI~VSNH 246 (263)
++..++.. ++|||+ ||- + .+-++.|.++|+||++|-.-
T Consensus 66 r~~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~~Gadavlv~~P 115 (318)
T 3qfe_A 66 RAQLIATARKAVGPDFPIMA-GVGAHSTRQVLEHINDASVAGANYVLVLPP 115 (318)
T ss_dssp HHHHHHHHHHHHCTTSCEEE-ECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHhCCCCcEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 33344443 479998 883 3 44456677899999998643
No 263
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=82.56 E-value=16 Score=32.07 Aligned_cols=45 Identities=22% Similarity=0.375 Sum_probs=35.7
Q ss_pred CCCCHHHHHHHHhhc-----CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 201 PSLSWKDIEWLRSIT-----NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~-----~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+..+-++++-+++.. ++||..-| |-+.+||...+++||+-|=.|+
T Consensus 214 ~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~RiGtS~ 264 (288)
T 3oa3_A 214 PGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERLGASA 264 (288)
T ss_dssp CCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred CCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeehhh
Confidence 345677777777654 57888888 9999999999999999876664
No 264
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=82.43 E-value=3.2 Score=35.02 Aligned_cols=75 Identities=11% Similarity=0.038 Sum_probs=50.6
Q ss_pred cCHHHHHHHHHHHHHcCCCEEEEcc-CCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCH
Q 039466 127 KKRDMAATLVQRAERNGFMALVLTA-DTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSW 205 (263)
Q Consensus 127 ~d~~~~~~li~ra~~aG~~al~vTv-D~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 205 (263)
.|.....+.+++++++|++.+-+.+ |-+. .| .-++..
T Consensus 14 ~D~~~l~~~i~~~~~~Gad~ihldi~DG~f-------------vp-----------------------------~~~~g~ 51 (230)
T 1tqj_A 14 ADFSRLGEEIKAVDEAGADWIHVDVMDGRF-------------VP-----------------------------NITIGP 51 (230)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSS-------------SS-----------------------------CBCBCH
T ss_pred cCHhHHHHHHHHHHHcCCCEEEEEEEecCC-------------Cc-----------------------------chhhhH
Confidence 4555667788999999988775554 2111 00 112344
Q ss_pred HHHHHHHhhcCCCEE--EEecCCHH-HHHHHHHcCCCEEEEc
Q 039466 206 KDIEWLRSITNLPIL--IKGVLTRE-DAIKAVEVGVAGIIVS 244 (263)
Q Consensus 206 ~dl~~lr~~~~lPii--lKGI~s~e-DA~~a~~~G~dgI~VS 244 (263)
+.++.||+.++.|+. ++- .+++ -...+.++|+|+|.|-
T Consensus 52 ~~v~~lr~~~~~~~~vhlmv-~dp~~~i~~~~~aGadgv~vh 92 (230)
T 1tqj_A 52 LIVDAIRPLTKKTLDVHLMI-VEPEKYVEDFAKAGADIISVH 92 (230)
T ss_dssp HHHHHHGGGCCSEEEEEEES-SSGGGTHHHHHHHTCSEEEEE
T ss_pred HHHHHHHhhcCCcEEEEEEc-cCHHHHHHHHHHcCCCEEEEC
Confidence 789999999988888 553 3432 3677889999999886
No 265
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=82.36 E-value=1.2 Score=37.44 Aligned_cols=38 Identities=18% Similarity=0.489 Sum_probs=31.4
Q ss_pred HHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 208 IEWLRSIT-NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 208 l~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
++.+|+.. ++||+.=| |.++++++++.+.|+||++|..
T Consensus 161 ~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGs 200 (219)
T 2h6r_A 161 VRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLAS 200 (219)
T ss_dssp HHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESH
T ss_pred HHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcH
Confidence 45566555 68988877 9999999999999999999953
No 266
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=82.31 E-value=23 Score=30.66 Aligned_cols=77 Identities=23% Similarity=0.148 Sum_probs=44.0
Q ss_pred ceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc-------cc-cCHHHHH
Q 039466 74 SIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA-------AY-KKRDMAA 133 (263)
Q Consensus 74 Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~-------~~-~d~~~~~ 133 (263)
|.++.|+. .+-.+.++-..+++-.-+.|+- +++||.+ +.|.|| +.+...+ +- .+-..+.
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai 85 (289)
T 2yxg_A 7 PAIITPFK-NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAI 85 (289)
T ss_dssp EBCCCCEE-TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHH
Confidence 44455665 4444444444666666666663 3445533 234444 1222222 11 2445677
Q ss_pred HHHHHHHHcCCCEEEEcc
Q 039466 134 TLVQRAERNGFMALVLTA 151 (263)
Q Consensus 134 ~li~ra~~aG~~al~vTv 151 (263)
++.+.|+++|++++++..
T Consensus 86 ~la~~a~~~Gadavlv~~ 103 (289)
T 2yxg_A 86 ELSVFAEDVGADAVLSIT 103 (289)
T ss_dssp HHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHhcCCCEEEECC
Confidence 889999999999998873
No 267
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=82.21 E-value=1.6 Score=39.45 Aligned_cols=45 Identities=20% Similarity=0.251 Sum_probs=38.8
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE--cCCCC
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV--SNHGA 248 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V--SNHGG 248 (263)
+|+.+++|++.+++||+.=| +.+++|++++++.| +|.|.+ +..||
T Consensus 225 ~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GG 273 (379)
T 2rdx_A 225 SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGG 273 (379)
T ss_dssp SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTS
T ss_pred CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCC
Confidence 89999999999999999999 78999999999875 888865 34455
No 268
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=82.21 E-value=0.81 Score=38.76 Aligned_cols=43 Identities=21% Similarity=0.294 Sum_probs=36.3
Q ss_pred CCHHHHHHHHhhc-----CCCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 203 LSWKDIEWLRSIT-----NLPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 203 ~~W~dl~~lr~~~-----~lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
...+.|+++|+.. ++||.+=|=.+.+++..+.++|+|+++|..
T Consensus 155 ~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aGad~vvvGS 202 (230)
T 1tqj_A 155 EVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVAGS 202 (230)
T ss_dssp GGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEESH
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcCCCEEEECH
Confidence 4578899999988 899999884445999999999999999863
No 269
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=82.17 E-value=1.8 Score=38.13 Aligned_cols=44 Identities=16% Similarity=-0.025 Sum_probs=36.0
Q ss_pred HHHHHHHHhhc-CCCEEEEe--c--CCHHHHHHHHHcCCCEEEEcC--CCC
Q 039466 205 WKDIEWLRSIT-NLPILIKG--V--LTREDAIKAVEVGVAGIIVSN--HGA 248 (263)
Q Consensus 205 W~dl~~lr~~~-~lPiilKG--I--~s~eDA~~a~~~G~dgI~VSN--HGG 248 (263)
.+-+++|++.+ ++||.+=+ = +....+..|+++|++-|.+|= -||
T Consensus 191 ~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~tv~GlG~ 241 (302)
T 2ftp_A 191 RRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVAGLGG 241 (302)
T ss_dssp HHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCCB
T ss_pred HHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEecccccCC
Confidence 35688899988 58999988 2 788899999999999999664 466
No 270
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=82.03 E-value=0.34 Score=40.55 Aligned_cols=41 Identities=17% Similarity=0.315 Sum_probs=33.4
Q ss_pred CCHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 203 LSWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 203 ~~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
+.-+.++.||+.. ++||++=| | +++.+..++++|+|+|+|.
T Consensus 151 ~~~~~l~~i~~~~~~~~pi~v~GGI-~~~~~~~~~~aGAd~vvvG 194 (218)
T 3jr2_A 151 WTTDDLDKMRQLSALGIELSITGGI-VPEDIYLFEGIKTKTFIAG 194 (218)
T ss_dssp SCHHHHHHHHHHHHTTCEEEEESSC-CGGGGGGGTTSCEEEEEES
T ss_pred CCHHHHHHHHHHhCCCCCEEEECCC-CHHHHHHHHHcCCCEEEEc
Confidence 4556666676654 79999887 7 7999999999999999985
No 271
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=82.02 E-value=2 Score=35.67 Aligned_cols=36 Identities=25% Similarity=0.468 Sum_probs=29.9
Q ss_pred HHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEE
Q 039466 207 DIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 207 dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~V 243 (263)
++...++..+.|+++ |+.|++++.+|.+.|+|.|-+
T Consensus 95 ~v~~~~~~~g~~~i~-G~~t~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 95 EVAALAQARGVPYLP-GVLTPTEVERALALGLSALKF 130 (207)
T ss_dssp HHHHHHHHHTCCEEE-EECSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCCEEe-cCCCHHHHHHHHHCCCCEEEE
Confidence 444444557889887 799999999999999999988
No 272
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=81.84 E-value=4.4 Score=34.40 Aligned_cols=36 Identities=11% Similarity=0.227 Sum_probs=30.3
Q ss_pred HHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEE
Q 039466 206 KDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGII 242 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~ 242 (263)
+.++.+++ .+++|.+=.|-++++++++.+.|||||+
T Consensus 201 ~~v~~~~~-~G~~v~~WTvn~~~~~~~l~~~GVdgIi 236 (252)
T 3qvq_A 201 QQVSDIKA-AGYKVLAFTINDESLALKLYNQGLDAVF 236 (252)
T ss_dssp HHHHHHHH-TTCEEEEECCCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHH-CCCEEEEEcCCCHHHHHHHHHcCCCEEE
Confidence 44555554 4889999999999999999999999996
No 273
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=81.80 E-value=4.9 Score=36.50 Aligned_cols=25 Identities=16% Similarity=0.199 Sum_probs=20.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccC
Q 039466 128 KRDMAATLVQRAERNGFMALVLTAD 152 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD 152 (263)
|.+..++++++..+.|+++|++.--
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v~GT 102 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIVGGT 102 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESST
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccc
Confidence 5677889999988999999887443
No 274
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=81.67 E-value=3.3 Score=36.56 Aligned_cols=73 Identities=16% Similarity=0.202 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..++++++..+.|++.|++.--+-- ...+++++
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE--------------------------------------------~~~Ls~~E 68 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVVQGSNGE--------------------------------------------FPFLTSSE 68 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEESSGGGT--------------------------------------------GGGSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccc--------------------------------------------hhhCCHHH
Confidence 5677888898888899998886433210 02234432
Q ss_pred ----HHHHHhhc--CCCEEEEecC--C----HHHHHHHHHcCCCEEEEcC
Q 039466 208 ----IEWLRSIT--NLPILIKGVL--T----REDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 208 ----l~~lr~~~--~lPiilKGI~--s----~eDA~~a~~~G~dgI~VSN 245 (263)
++..++.. ++|||+ |+- + .+-++.|.++|+||++|..
T Consensus 69 r~~v~~~~~~~~~gr~pvia-Gvg~~~t~~ai~la~~A~~~Gadavlv~~ 117 (307)
T 3s5o_A 69 RLEVVSRVRQAMPKNRLLLA-GSGCESTQATVEMTVSMAQVGADAAMVVT 117 (307)
T ss_dssp HHHHHHHHHHTSCTTSEEEE-ECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHcCCCCcEEE-ecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 44445544 478887 883 3 4445677789999999853
No 275
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=81.67 E-value=1.6 Score=37.02 Aligned_cols=37 Identities=19% Similarity=0.281 Sum_probs=31.8
Q ss_pred HHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEE
Q 039466 206 KDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~V 243 (263)
.++...++..+.|+|+ |+.|++++.+|.+.|+|.|-+
T Consensus 109 ~~v~~~~~~~g~~~i~-G~~t~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 109 EDILEAGVDSEIPLLP-GISTPSEIMMGYALGYRRFKL 145 (225)
T ss_dssp HHHHHHHHHCSSCEEC-EECSHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHhCCCEEE-eeCCHHHHHHHHHCCCCEEEE
Confidence 3566667778888887 899999999999999999988
No 276
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=81.60 E-value=0.63 Score=38.98 Aligned_cols=44 Identities=23% Similarity=0.252 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHHhhcCCCEEEEecCCHHHHHHHHH-cCCCEEEEcC
Q 039466 201 PSLSWKDIEWLRSITNLPILIKGVLTREDAIKAVE-VGVAGIIVSN 245 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~~lPiilKGI~s~eDA~~a~~-~G~dgI~VSN 245 (263)
..++|+.++.++ ..+.|+++=|=+++|.+..|++ .++.||+||.
T Consensus 137 ~~fdw~~l~~~~-~~~~p~~LAGGL~peNV~~ai~~~~p~gVDvsS 181 (205)
T 1nsj_A 137 KTFDWSLILPYR-DRFRYLVLSGGLNPENVRSAIDVVRPFAVDVSS 181 (205)
T ss_dssp SCCCGGGTGGGG-GGSSCEEEESSCCTTTHHHHHHHHCCSEEEESG
T ss_pred CccCHHHHHhhh-cCCCcEEEECCCCHHHHHHHHHhcCCCEEEECC
Confidence 457998776543 3478999999899999988877 6999999985
No 277
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=81.59 E-value=4.2 Score=36.44 Aligned_cols=147 Identities=16% Similarity=0.238 Sum_probs=75.7
Q ss_pred HHHHHHHH--CCCceeecCCCCccHHHHHHhcc-c------------cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCc
Q 039466 93 ATARAAAS--CNTIMVLSFTSSCSIEEVAASCN-A------------AYKKRDMAATLVQRAERNGFMALVLTADTPRLD 157 (263)
Q Consensus 93 a~AraA~~--~gi~~~lss~s~~sieeV~~~~~-~------------~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g 157 (263)
.+++++.+ .++|.+|-.-=..+.|.|.++-. | +-.|-+.++++++.|.+.|+. |-.-....|
T Consensus 64 ~~v~~aa~~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvs---VEaELG~vg 140 (323)
T 2isw_A 64 KLCEAALEKHPDIPICIHLDHGDTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVS---VEAELGTLG 140 (323)
T ss_dssp HHHHHHHHHCTTSCEEEEEEEECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCE---EEEEESCC-
T ss_pred HHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCe---EEEEeCCcc
Confidence 44444444 57777775544445666654421 1 777788888888888877632 222222222
Q ss_pred chHHHH--hhhhhhh-hhhhhh-hccccCCCCCCCccHHHHHHHhcCCC--CCHHHHHHHHhhcCCCEEEEec-------
Q 039466 158 RREADI--KNKMIAQ-QLKNLE-GLLSTKVTSDTGSNLEAYAKETMDPS--LSWKDIEWLRSITNLPILIKGV------- 224 (263)
Q Consensus 158 ~R~~d~--r~~~~~p-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~W~dl~~lr~~~~lPiilKGI------- 224 (263)
--|.+. ...++-| ....+. ......+.-..++.++.|..+ ..+. ++++-|+.|++.+++|+|+=|=
T Consensus 141 g~Ed~v~~~~~yTdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~-~~p~~~L~~~~L~~I~~~~~vpLVlHGgSsvp~~~ 219 (323)
T 2isw_A 141 GIEEDVQNTVQLTEPQDAKKFVELTGVDALAVAIGTSHGAYKFK-SESDIRLAIDRVKTISDLTGIPLVMHGSSSVPKDV 219 (323)
T ss_dssp ---------CCCCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCC-C----CCCCHHHHHHHHHHCSCEEECSCCCCCHHH
T ss_pred CCccCcccccccCCHHHHHHHHHHHCCCEEEEecCccccccCCC-CCcccccCHHHHHHHHHHhCCCeEEECCCCCCHHH
Confidence 222211 1112233 111111 000000000111122222100 1356 8999999999999999999993
Q ss_pred ----------------CCHHHHHHHHHcCCCEEEE
Q 039466 225 ----------------LTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 225 ----------------~s~eDA~~a~~~G~dgI~V 243 (263)
...|+.++|+++|+.=|=|
T Consensus 220 ~~~~~~~gg~~~~~~Gvp~e~i~~ai~~GV~KiNi 254 (323)
T 2isw_A 220 KDMINKYGGKMPDAVGVPIESIVHAIGEGVCKINV 254 (323)
T ss_dssp HHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHhccccccCCCCCHHHHHHHHHCCCeEEEE
Confidence 4788999999999876644
No 278
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=81.54 E-value=1.8 Score=38.86 Aligned_cols=42 Identities=19% Similarity=0.309 Sum_probs=37.0
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|++.+++||+.=| +.+++|++++++.| +|.|.+
T Consensus 226 ~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~i 269 (359)
T 1mdl_A 226 QHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMP 269 (359)
T ss_dssp TTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred hhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEee
Confidence 3589999999999999999999 78999999999875 787754
No 279
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=81.51 E-value=2.2 Score=36.17 Aligned_cols=43 Identities=23% Similarity=0.248 Sum_probs=37.2
Q ss_pred CCHHHHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 203 LSWKDIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 203 ~~W~dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
..++.|+++|+.. +.+|.+=|=.+++++..++++|+|.+++..
T Consensus 159 ~~l~ki~~lr~~~~~~~I~VdGGI~~~ti~~~~~aGAd~~V~Gs 202 (227)
T 1tqx_A 159 DMMGKVSFLRKKYKNLNIQVDGGLNIETTEISASHGANIIVAGT 202 (227)
T ss_dssp GGHHHHHHHHHHCTTCEEEEESSCCHHHHHHHHHHTCCEEEESH
T ss_pred HHHHHHHHHHHhccCCeEEEECCCCHHHHHHHHHcCCCEEEEeH
Confidence 3578899999887 788999997789999999999999998863
No 280
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=81.37 E-value=0.27 Score=45.60 Aligned_cols=40 Identities=20% Similarity=0.062 Sum_probs=34.1
Q ss_pred HHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHc----CCCEEEEc
Q 039466 205 WKDIEWLRSITNLPILIKG-VLTREDAIKAVEV----GVAGIIVS 244 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~----G~dgI~VS 244 (263)
|+.++.+|+.|++|||+-| |.+.+||.++++. ++|+|.+.
T Consensus 302 ~~~~~~ir~~~~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~G 346 (407)
T 3tjl_A 302 AGDNEFVSKIWKGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFS 346 (407)
T ss_dssp CCCSHHHHHHCCSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECS
T ss_pred hHHHHHHHHHhCCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeC
Confidence 5668999999999999999 8888888888876 59999873
No 281
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=81.29 E-value=21 Score=32.22 Aligned_cols=103 Identities=16% Similarity=0.081 Sum_probs=70.1
Q ss_pred HHHHHHHHCCCceeecCCCCccHHHHHHhccccccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhh
Q 039466 93 ATARAAASCNTIMVLSFTSSCSIEEVAASCNAAYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQL 172 (263)
Q Consensus 93 a~AraA~~~gi~~~lss~s~~sieeV~~~~~~~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~ 172 (263)
.+-+.+++.|-|++||+..+ +++||..+. +...+.|.+-+.++.-+. | |+
T Consensus 139 ~LL~~va~~gkPviLstGma-t~~Ei~~Av--------------e~i~~~G~~iiLlhc~s~------------Y--p~- 188 (349)
T 2wqp_A 139 PLIKLVASFGKPIILSTGMN-SIESIKKSV--------------EIIREAGVPYALLHCTNI------------Y--PT- 188 (349)
T ss_dssp HHHHHHHTTCSCEEEECTTC-CHHHHHHHH--------------HHHHHHTCCEEEEECCCC------------S--SC-
T ss_pred HHHHHHHhcCCeEEEECCCC-CHHHHHHHH--------------HHHHHcCCCEEEEeccCC------------C--CC-
Confidence 78889999999999999986 899986553 233456665555542211 1 10
Q ss_pred hhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcCCCCCC
Q 039466 173 KNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSIT-NLPILIKG-VLTREDAIKAVEVGVAGIIVSNHGARQ 250 (263)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~dgI~VSNHGGRq 250 (263)
....++...|..|++.+ ++||..-+ -....-+..|+.+||+-|=+-..=-|.
T Consensus 189 --------------------------~~~~~nL~ai~~lk~~f~~lpVg~sdHt~G~~~~~AAvAlGA~iIEkH~tld~a 242 (349)
T 2wqp_A 189 --------------------------PYEDVRLGGMNDLSEAFPDAIIGLSDHTLDNYACLGAVALGGSILERHFTDRMD 242 (349)
T ss_dssp --------------------------CGGGCCTHHHHHHHHHCTTSEEEEECCSSSSHHHHHHHHHTCCEEEEEBCSCTT
T ss_pred --------------------------ChhhcCHHHHHHHHHHCCCCCEEeCCCCCcHHHHHHHHHhCCCEEEeCCCcccc
Confidence 01234567888999999 89997765 456788899999999955554434444
Q ss_pred C
Q 039466 251 L 251 (263)
Q Consensus 251 l 251 (263)
+
T Consensus 243 ~ 243 (349)
T 2wqp_A 243 R 243 (349)
T ss_dssp C
T ss_pred C
Confidence 4
No 282
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=80.95 E-value=1 Score=37.56 Aligned_cols=44 Identities=9% Similarity=0.072 Sum_probs=36.3
Q ss_pred CCCCHHHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 201 PSLSWKDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
..++|+.++.+. ..+.|+++=|=+++|.+..|+..++.||+||.
T Consensus 132 ~~fdW~~l~~~~-~~~~p~~LAGGL~peNV~~ai~~~p~gVDvsS 175 (203)
T 1v5x_A 132 EAYPRAWAKPLL-ATGRRVILAGGIAPENLEEVLALRPYALDLAS 175 (203)
T ss_dssp CCCCGGGGHHHH-HTTSCEEECSSCCSTTHHHHHHHCCSEEEESG
T ss_pred CccCHHHHHhhh-ccCCcEEEECCCCHHHHHHHHhcCCCEEEeCC
Confidence 468999887632 35689999998899999888877999999985
No 283
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=80.93 E-value=29 Score=30.54 Aligned_cols=94 Identities=17% Similarity=0.205 Sum_probs=48.2
Q ss_pred cccccccccCCcc--cc--cceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHh
Q 039466 58 CRIDISTSTLDYK--IS--ASIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAAS 121 (263)
Q Consensus 58 ~~~d~st~~lG~~--~~--~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~ 121 (263)
+.+|+.+.=+..+ +. .|.++.|+.-.+-.+.++-..+++-.-+.|+- +++||.+ +.|.|| +.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~ 88 (314)
T 3qze_A 9 SGVDLGTENLYFQSMIAGSMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQ 88 (314)
T ss_dssp --------------CCCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHH
T ss_pred cccccccccccccccCCeeEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 3455555433333 21 45666676544434444545666666666763 4455544 345555 2233
Q ss_pred ccc-------c-ccCHHHHHHHHHHHHHcCCCEEEEcc
Q 039466 122 CNA-------A-YKKRDMAATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 122 ~~~-------~-~~d~~~~~~li~ra~~aG~~al~vTv 151 (263)
..+ . -.+-..+.++.+.|+++|++++++..
T Consensus 89 ~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 89 VKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp HTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred hCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 322 1 23556788899999999999998864
No 284
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=80.79 E-value=4.7 Score=36.38 Aligned_cols=41 Identities=24% Similarity=0.209 Sum_probs=30.6
Q ss_pred HHHHHHHhhc--CCCEEEEe---------cCCHHH----HHHHHHcCCCEEEEcCC
Q 039466 206 KDIEWLRSIT--NLPILIKG---------VLTRED----AIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 206 ~dl~~lr~~~--~lPiilKG---------I~s~eD----A~~a~~~G~dgI~VSNH 246 (263)
+-++.+|+.+ +.||.+|= -.+.+| |+.+.+.|+|.|.||+-
T Consensus 213 eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g 268 (363)
T 3l5l_A 213 ETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVG 268 (363)
T ss_dssp HHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 5688899988 47999982 134556 55666789999999973
No 285
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=80.50 E-value=15 Score=33.29 Aligned_cols=41 Identities=15% Similarity=0.245 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
.-+|+.+++|++.+++||..=+ +.+..|.+.+++.| +|.|.
T Consensus 226 ~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~ 268 (388)
T 3qld_A 226 EDDWFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLN 268 (388)
T ss_dssp TTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEE
T ss_pred cccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEE
Confidence 3468899999999999999977 78999999999876 66654
No 286
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=80.14 E-value=2.1 Score=38.65 Aligned_cols=40 Identities=15% Similarity=0.259 Sum_probs=36.2
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
+|+.+++|++.+++||+.-| +.+++|++++++.| +|.|.+
T Consensus 225 d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 266 (378)
T 2qdd_A 225 TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKI 266 (378)
T ss_dssp SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEe
Confidence 89999999999999999999 78999999999865 888865
No 287
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=80.10 E-value=1.8 Score=39.11 Aligned_cols=43 Identities=14% Similarity=-0.119 Sum_probs=37.1
Q ss_pred CCCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 201 PSLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
+.-+|+.+++|++.+++||+.=| +.+++|++++++.| +|.|.+
T Consensus 227 ~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 271 (371)
T 2ovl_A 227 IPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEP 271 (371)
T ss_dssp CTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECC
T ss_pred CcccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEee
Confidence 34579999999999999999999 78999999999875 787754
No 288
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=80.08 E-value=2.5 Score=38.02 Aligned_cols=42 Identities=14% Similarity=0.319 Sum_probs=36.8
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|++.+++||+.=| +.+++|++++++.| +|+|.+
T Consensus 223 ~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 266 (369)
T 2p8b_A 223 ADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNI 266 (369)
T ss_dssp TTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred cccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEe
Confidence 4579999999999999999998 78999999999865 888765
No 289
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=80.03 E-value=30 Score=30.24 Aligned_cols=24 Identities=8% Similarity=0.098 Sum_probs=19.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcc
Q 039466 128 KRDMAATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTv 151 (263)
+-..+.++.+.|+++|++++++..
T Consensus 94 ~t~~ai~la~~A~~~Gadavlv~~ 117 (307)
T 3s5o_A 94 STQATVEMTVSMAQVGADAAMVVT 117 (307)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcC
Confidence 455677889999999999999863
No 290
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=79.91 E-value=29 Score=30.32 Aligned_cols=78 Identities=18% Similarity=0.195 Sum_probs=45.3
Q ss_pred cceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc-------cc-cCHHHH
Q 039466 73 ASIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA-------AY-KKRDMA 132 (263)
Q Consensus 73 ~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~-------~~-~d~~~~ 132 (263)
.|.++.|+. .+-.+.++-..+++-.-+.|+- +++||.+ +.|.|| +.+...+ +- .+-..+
T Consensus 18 ~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~a 96 (306)
T 1o5k_A 18 GTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKT 96 (306)
T ss_dssp EEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHH
T ss_pred eeeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHH
Confidence 345556665 5444444545666666666663 3445433 345554 2222222 11 245667
Q ss_pred HHHHHHHHHcCCCEEEEcc
Q 039466 133 ATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 133 ~~li~ra~~aG~~al~vTv 151 (263)
.++.+.|+++|++++++..
T Consensus 97 i~la~~A~~~Gadavlv~~ 115 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVVT 115 (306)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 8889999999999998874
No 291
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=79.75 E-value=2.5 Score=38.00 Aligned_cols=42 Identities=12% Similarity=0.154 Sum_probs=37.3
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|++.+++||+.=| +.+++|++++++.| +|.|.+
T Consensus 225 ~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 268 (370)
T 1nu5_A 225 RANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSL 268 (370)
T ss_dssp TTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred cccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEE
Confidence 3589999999999999999999 78999999999976 788765
No 292
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=79.57 E-value=2.1 Score=37.71 Aligned_cols=43 Identities=19% Similarity=0.241 Sum_probs=27.0
Q ss_pred CCCHHH----HHHHHhhc--CCCEEEEec--CCHH----HHHHHHHcCCCEEEEcC
Q 039466 202 SLSWKD----IEWLRSIT--NLPILIKGV--LTRE----DAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 202 ~~~W~d----l~~lr~~~--~lPiilKGI--~s~e----DA~~a~~~G~dgI~VSN 245 (263)
.+++++ ++..++.. ++|||+ || .+-+ -++.|.++|+||++|..
T Consensus 53 ~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (300)
T 3eb2_A 53 YLGTAQREAVVRATIEAAQRRVPVVA-GVASTSVADAVAQAKLYEKLGADGILAIL 107 (300)
T ss_dssp GCCHHHHHHHHHHHHHHHTTSSCBEE-EEEESSHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ccCHHHHHHHHHHHHHHhCCCCcEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 355543 33344433 589888 88 3444 45566789999998853
No 293
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=79.46 E-value=13 Score=32.18 Aligned_cols=73 Identities=18% Similarity=0.150 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..++++++..+.|++.|++.--+-- ...+++++
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v~GttGE--------------------------------------------~~~Ls~~E 52 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFVAGTTGL--------------------------------------------GPALSLQE 52 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETSTTTT--------------------------------------------GGGSCHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccC--------------------------------------------hhhCCHHH
Confidence 6677889999988899999886433211 02344433
Q ss_pred ----HHHHHhhcCCCEEEEecC--C----HHHHHHHHHcCCCEEEEcCC
Q 039466 208 ----IEWLRSITNLPILIKGVL--T----REDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 208 ----l~~lr~~~~lPiilKGI~--s----~eDA~~a~~~G~dgI~VSNH 246 (263)
++..++..+. |+=||. + .+-++.|.++|+||++|..-
T Consensus 53 r~~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P 99 (286)
T 2r91_A 53 KMELTDAATSAARR--VIVQVASLNADEAIALAKYAESRGAEAVASLPP 99 (286)
T ss_dssp HHHHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 4555666666 778884 3 44456677799999998643
No 294
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=79.44 E-value=1.4 Score=37.78 Aligned_cols=22 Identities=14% Similarity=0.228 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEcc
Q 039466 130 DMAATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 130 ~~~~~li~ra~~aG~~al~vTv 151 (263)
+.+.++++.+.++|++++.+.+
T Consensus 20 ~~t~~~~~~l~~~GaD~ielG~ 41 (240)
T 1viz_A 20 DLPDEQLEILCESGTDAVIIGG 41 (240)
T ss_dssp CCCHHHHHHHHTSCCSEEEECC
T ss_pred cccHHHHHHHHHcCCCEEEECC
Confidence 4466778888999999999988
No 295
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=79.42 E-value=31 Score=30.08 Aligned_cols=79 Identities=11% Similarity=0.068 Sum_probs=45.0
Q ss_pred cceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc-------cc-cCHHHH
Q 039466 73 ASIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA-------AY-KKRDMA 132 (263)
Q Consensus 73 ~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~-------~~-~d~~~~ 132 (263)
.|.++.|+.-.+-.+.++-..+++-.-+.|+- +++||.+ +.|.|| +.+...+ +- .+-..+
T Consensus 21 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~a 100 (304)
T 3cpr_A 21 GVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTS 100 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHH
T ss_pred EEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHH
Confidence 34455565433333344444666666666663 3445533 345554 2222222 11 355667
Q ss_pred HHHHHHHHHcCCCEEEEcc
Q 039466 133 ATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 133 ~~li~ra~~aG~~al~vTv 151 (263)
.++.+.|+++|++++++..
T Consensus 101 i~la~~A~~~Gadavlv~~ 119 (304)
T 3cpr_A 101 VELAEAAASAGADGLLVVT 119 (304)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 8889999999999998874
No 296
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=79.36 E-value=2.1 Score=34.90 Aligned_cols=38 Identities=8% Similarity=0.057 Sum_probs=29.9
Q ss_pred HHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEEc
Q 039466 206 KDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~VS 244 (263)
+.|+++++. ++|+++=|=.+++++..++++|+|+|+|+
T Consensus 149 ~~i~~~~~~-~~pi~v~GGI~~~~~~~~~~aGad~vvvG 186 (207)
T 3ajx_A 149 GLLAAGEKA-RVPFSVAGGVKVATIPAVQKAGAEVAVAG 186 (207)
T ss_dssp HHHHHHHHH-TSCEEEESSCCGGGHHHHHHTTCSEEEES
T ss_pred HHHHHhhCC-CCCEEEECCcCHHHHHHHHHcCCCEEEEe
Confidence 556666654 79998887334889999999999999985
No 297
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=79.21 E-value=4.7 Score=43.19 Aligned_cols=30 Identities=17% Similarity=0.152 Sum_probs=28.0
Q ss_pred CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 216 NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 216 ~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
++|||.=| |.+..|+.+|+.+||+++.++.
T Consensus 1099 ~IpVIAdGGIrtG~DVakALaLGAdaV~iGT 1129 (1520)
T 1ofd_A 1099 RVLLRADGGLKTGWDVVMAALMGAEEYGFGS 1129 (1520)
T ss_dssp GCEEEEESSCCSHHHHHHHHHTTCSEEECSH
T ss_pred CceEEEECCCCCHHHHHHHHHcCCCeeEEcH
Confidence 69999999 9999999999999999998863
No 298
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=79.15 E-value=3 Score=36.34 Aligned_cols=40 Identities=20% Similarity=0.140 Sum_probs=34.5
Q ss_pred HHHHHHHhhcC--CCEEEEecCCHHHHHHHHHcCCCEEEEcCC
Q 039466 206 KDIEWLRSITN--LPILIKGVLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 206 ~dl~~lr~~~~--lPiilKGI~s~eDA~~a~~~G~dgI~VSNH 246 (263)
+.++.+|+..+ .++++ .+.+.++++.|++.|+|.|.++|-
T Consensus 170 ~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~ 211 (273)
T 2b7n_A 170 SFLTHARKNLPFTAKIEI-ECESFEEAKNAMNAGADIVMCDNL 211 (273)
T ss_dssp HHHHHHGGGSCTTCCEEE-EESSHHHHHHHHHHTCSEEEEETC
T ss_pred HHHHHHHHhCCCCceEEE-EcCCHHHHHHHHHcCCCEEEECCC
Confidence 46888888876 46776 899999999999999999999984
No 299
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=79.00 E-value=2.9 Score=37.71 Aligned_cols=48 Identities=15% Similarity=0.113 Sum_probs=39.9
Q ss_pred CCCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE--cCCCC
Q 039466 201 PSLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV--SNHGA 248 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V--SNHGG 248 (263)
+..+|+.+++|++.+++||..=+ +.+++|++.+++.| +|.|.+ +..||
T Consensus 224 ~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GG 275 (370)
T 1chr_A 224 GRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGG 275 (370)
T ss_dssp CTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTTSCS
T ss_pred CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccccCC
Confidence 34578999999999999999988 78999999999875 887765 45565
No 300
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=78.68 E-value=3.5 Score=37.21 Aligned_cols=42 Identities=12% Similarity=0.196 Sum_probs=36.9
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCC-HHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLT-REDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s-~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|++.+++||+.=| +.+ ++|++++++.| +|.|.+
T Consensus 237 ~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~i 281 (382)
T 1rvk_A 237 EQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRT 281 (382)
T ss_dssp TTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEE
T ss_pred hhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEee
Confidence 3489999999999999999998 789 99999999976 788764
No 301
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=78.44 E-value=8.7 Score=32.49 Aligned_cols=36 Identities=19% Similarity=0.107 Sum_probs=30.5
Q ss_pred HHHHHHHhhcCCCEEEEec----CCHHHHHHHHHcCCCEEE
Q 039466 206 KDIEWLRSITNLPILIKGV----LTREDAIKAVEVGVAGII 242 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKGI----~s~eDA~~a~~~G~dgI~ 242 (263)
+.++.+++ .+++|.+=.| -++++.+++.+.|||||+
T Consensus 203 ~~v~~~~~-~G~~v~~wTv~~~~n~~~~~~~l~~~GvdgI~ 242 (258)
T 2o55_A 203 EQVCTAHE-KGLSVTVWMPWIFDDSEEDWKKCLELQVDLIC 242 (258)
T ss_dssp HHHHHHHH-TTCEEEEECCTTCCCCHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHH-CCCEEEEeeCCCCCCCHHHHHHHHHcCCCEEE
Confidence 44555654 5899999999 999999999999999986
No 302
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=78.41 E-value=2.5 Score=38.06 Aligned_cols=40 Identities=23% Similarity=0.434 Sum_probs=36.1
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
+|+.+++|++.+++||+.=| +.+++|++++++.| +|.|.+
T Consensus 227 ~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 268 (371)
T 2ps2_A 227 TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDL 268 (371)
T ss_dssp SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 89999999999999999999 78999999999875 788754
No 303
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=78.37 E-value=2 Score=39.08 Aligned_cols=42 Identities=19% Similarity=0.119 Sum_probs=37.0
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
..+|+.+++|++.+++||+.=| +.+++|++++++.| +|.|.+
T Consensus 245 ~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 288 (388)
T 2nql_A 245 TEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQP 288 (388)
T ss_dssp TTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECC
T ss_pred hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEe
Confidence 3489999999999999999999 78999999999875 888764
No 304
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=78.34 E-value=1.8 Score=36.67 Aligned_cols=40 Identities=25% Similarity=0.437 Sum_probs=33.4
Q ss_pred HHHHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEc
Q 039466 205 WKDIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 205 W~dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VS 244 (263)
++.|+++|+.. +.||.+=|=.+++.+..++++|||.+|+.
T Consensus 157 l~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~aGAd~~VvG 197 (228)
T 3ovp_A 157 MPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSG 197 (228)
T ss_dssp HHHHHHHHHHCTTCEEEEESSCSTTTHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHcCCCEEEEe
Confidence 45688888876 57898888447999999999999999885
No 305
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=78.24 E-value=1.8 Score=38.28 Aligned_cols=52 Identities=21% Similarity=0.194 Sum_probs=42.4
Q ss_pred CCCHHHHHHHHhhc--CCCEEEEecCCHHHHHHHHHcCCCEEEEcC--CCCCCCCC
Q 039466 202 SLSWKDIEWLRSIT--NLPILIKGVLTREDAIKAVEVGVAGIIVSN--HGARQLDY 253 (263)
Q Consensus 202 ~~~W~dl~~lr~~~--~lPiilKGI~s~eDA~~a~~~G~dgI~VSN--HGGRqlD~ 253 (263)
+++-++++.+++.. +.||.+-|=.+.+.+...++.|||+|.||. |.-..||.
T Consensus 236 ~~~~e~l~~~v~~~~~~~~I~ASGGIt~~~i~~~a~~GvD~isvGsli~~a~~~D~ 291 (296)
T 1qap_A 236 NFNTDQMREAVKRVNGQARLEVSGNVTAETLREFAETGVDFISVGALTKHVRALDL 291 (296)
T ss_dssp SCCHHHHHHHHHTTCTTCCEEECCCSCHHHHHHHHHTTCSEEECSHHHHEEECCCE
T ss_pred CCCHHHHHHHHHHhCCCCeEEEECCCCHHHHHHHHHcCCCEEEEeHHHcCCCCCce
Confidence 46778898888877 478888883499999999999999999987 66555553
No 306
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=78.14 E-value=1.4 Score=36.09 Aligned_cols=41 Identities=15% Similarity=0.191 Sum_probs=35.2
Q ss_pred CHHHHHHHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSIT-NLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~-~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
.++.++++++.. ++||+.=| | +++++..++++|+++|+|+.
T Consensus 137 g~~~~~~l~~~~~~~pvia~GGI-~~~~~~~~~~~Ga~~v~vGs 179 (205)
T 1wa3_A 137 GPQFVKAMKGPFPNVKFVPTGGV-NLDNVCEWFKAGVLAVGVGS 179 (205)
T ss_dssp HHHHHHHHHTTCTTCEEEEBSSC-CTTTHHHHHHHTCSCEEECH
T ss_pred CHHHHHHHHHhCCCCcEEEcCCC-CHHHHHHHHHCCCCEEEECc
Confidence 357788899888 89999997 7 58999999999999999853
No 307
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=77.97 E-value=8.7 Score=34.10 Aligned_cols=79 Identities=16% Similarity=0.240 Sum_probs=57.0
Q ss_pred cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCC
Q 039466 125 AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLS 204 (263)
Q Consensus 125 ~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (263)
.+.|++...+.++ +.|+++|.+.+-+... . |.. ...+.++
T Consensus 153 ~yT~Peea~~Fv~---~TgvD~LAvaiGt~HG-~--------Yk~----------------------------~~~p~Ld 192 (307)
T 3n9r_A 153 VLVNPKEAEQFVK---ESQVDYLAPAIGTSHG-A--------FKF----------------------------KGEPKLD 192 (307)
T ss_dssp CSCCHHHHHHHHH---HHCCSEEEECSSCCSS-S--------BCC----------------------------SSSCCCC
T ss_pred cCCCHHHHHHHHH---HHCCCEEEEecCCccc-c--------cCC----------------------------CCCCccC
Confidence 3566766655554 5799999998887531 1 000 0236789
Q ss_pred HHHHHHHHhhcCCCEEEEecC-----------------------CHHHHHHHHHcCCCEEEE
Q 039466 205 WKDIEWLRSITNLPILIKGVL-----------------------TREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKGI~-----------------------s~eDA~~a~~~G~dgI~V 243 (263)
++.|+.|++..+.|+|+=|-. ..|+.++|+++|+.=|=|
T Consensus 193 ~~~L~~I~~~~~~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiNi 254 (307)
T 3n9r_A 193 FERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNT 254 (307)
T ss_dssp HHHHHHHHHHHCSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHhcCCCCeEEeCCCCcchHHHHHHHHhcCccCCCCCCCHHHHHHHHHcCceEEEe
Confidence 999999988889999999843 678888999988876654
No 308
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=77.92 E-value=3.5 Score=36.97 Aligned_cols=42 Identities=17% Similarity=0.234 Sum_probs=36.8
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|++.+++||+.=+ +.+++|++++++.| +|.|.+
T Consensus 224 ~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 267 (366)
T 1tkk_A 224 KDDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINI 267 (366)
T ss_dssp TTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred cccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEe
Confidence 4589999999999999999998 78999999999865 888765
No 309
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=77.53 E-value=12 Score=35.76 Aligned_cols=44 Identities=18% Similarity=0.177 Sum_probs=33.4
Q ss_pred HHHHHHHhhc--CCCEEEEec----CCHHHHHHHHHcCCCEEEEc--CCCCC
Q 039466 206 KDIEWLRSIT--NLPILIKGV----LTREDAIKAVEVGVAGIIVS--NHGAR 249 (263)
Q Consensus 206 ~dl~~lr~~~--~lPiilKGI----~s~eDA~~a~~~G~dgI~VS--NHGGR 249 (263)
+-+++|++.+ ++||-+=.= +...-+..|+++||+.|..| +-|+|
T Consensus 208 ~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~~VD~ti~g~Ger 259 (539)
T 1rqb_A 208 DIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDVVDTAISSMSLG 259 (539)
T ss_dssp HHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSEEEEBCGGGCST
T ss_pred HHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccccCCC
Confidence 4578899988 688755541 67788999999999999855 45555
No 310
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=77.48 E-value=3.5 Score=36.39 Aligned_cols=40 Identities=20% Similarity=0.361 Sum_probs=33.9
Q ss_pred HHHHHHHhhcC--CCEEEEecCCHHHHHHHHHcCCCEEEEcCC
Q 039466 206 KDIEWLRSITN--LPILIKGVLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 206 ~dl~~lr~~~~--lPiilKGI~s~eDA~~a~~~G~dgI~VSNH 246 (263)
+.++.+|+..+ .++++ ++.+.++++.|++.|+|+|.++|-
T Consensus 185 ~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~ 226 (299)
T 2jbm_A 185 KAVRAARQAADFALKVEV-ECSSLQEAVQAAEAGADLVLLDNF 226 (299)
T ss_dssp HHHHHHHHHHTTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC
T ss_pred HHHHHHHHhCCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCC
Confidence 46888888765 46666 899999999999999999999994
No 311
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=77.36 E-value=39 Score=30.08 Aligned_cols=79 Identities=13% Similarity=0.090 Sum_probs=47.0
Q ss_pred cceeecccCCcccCCChhHHHHHHHHHHCCC--ceeecCCC---CccHHH-------HHHhccc-------cc-cCHHHH
Q 039466 73 ASIIIAPTGLHKLANPEGEVATARAAASCNT--IMVLSFTS---SCSIEE-------VAASCNA-------AY-KKRDMA 132 (263)
Q Consensus 73 ~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi--~~~lss~s---~~siee-------V~~~~~~-------~~-~d~~~~ 132 (263)
.|.++.|+.-.+-.+.++-..+++-.-+.|+ .+++||.+ +.|.|| +.+...+ +- .+-..+
T Consensus 36 ~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~ea 115 (343)
T 2v9d_A 36 IPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARET 115 (343)
T ss_dssp CCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHH
Confidence 4556667653333344444466666666666 34456544 345554 2223222 11 355667
Q ss_pred HHHHHHHHHcCCCEEEEcc
Q 039466 133 ATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 133 ~~li~ra~~aG~~al~vTv 151 (263)
.++.+.|+++|++++++..
T Consensus 116 i~la~~A~~~Gadavlv~~ 134 (343)
T 2v9d_A 116 IELSQHAQQAGADGIVVIN 134 (343)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 8889999999999998874
No 312
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=77.07 E-value=11 Score=31.91 Aligned_cols=37 Identities=16% Similarity=0.118 Sum_probs=26.5
Q ss_pred HHHHHhhcCCCEEEEec----------CCH---HHH-HHHHHcCCCEEEEcC
Q 039466 208 IEWLRSITNLPILIKGV----------LTR---EDA-IKAVEVGVAGIIVSN 245 (263)
Q Consensus 208 l~~lr~~~~lPiilKGI----------~s~---eDA-~~a~~~G~dgI~VSN 245 (263)
+..+.+.+++|++++ + +++ +++ +.|.+.|+|.|.+++
T Consensus 137 v~~~~~~~g~~viv~-~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~ 187 (273)
T 2qjg_A 137 IAETCEYWGMPLIAM-MYPRGKHIQNERDPELVAHAARLGAELGADIVKTSY 187 (273)
T ss_dssp HHHHHHHHTCCEEEE-EEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHcCCCEEEE-eCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC
Confidence 344444578898885 4 455 444 778889999999986
No 313
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=77.05 E-value=29 Score=29.39 Aligned_cols=45 Identities=20% Similarity=0.267 Sum_probs=36.1
Q ss_pred CCCCHHHHHHHHhhcC--CCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 201 PSLSWKDIEWLRSITN--LPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~~--lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+..+-++++-+++..+ +||-.-| |-+.+||...+++|++=|=+|+
T Consensus 173 ~gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aGa~RiGtS~ 220 (231)
T 3ndo_A 173 GGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAGATRLGLSG 220 (231)
T ss_dssp CSCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTTCSEEEESS
T ss_pred CCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhcchhcccch
Confidence 4457789999998876 5566666 9999999999999999776653
No 314
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=76.77 E-value=6.7 Score=34.67 Aligned_cols=73 Identities=18% Similarity=0.297 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..+++++...+.|++.|++.--+-- ...+++++
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE--------------------------------------------~~~Ls~~E 61 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILLAGTTAE--------------------------------------------SPTLTHDE 61 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEESSTTTT--------------------------------------------GGGSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccC--------------------------------------------hhhCCHHH
Confidence 5566788888888899888876443311 02345543
Q ss_pred ----HHHHHhhc--CCCEEEEecC--CHHH----HHHHHHcCC-CEEEEcC
Q 039466 208 ----IEWLRSIT--NLPILIKGVL--TRED----AIKAVEVGV-AGIIVSN 245 (263)
Q Consensus 208 ----l~~lr~~~--~lPiilKGI~--s~eD----A~~a~~~G~-dgI~VSN 245 (263)
++..++.. ++|||+ ||- +-++ ++.|.++|+ |||+|..
T Consensus 62 r~~v~~~~~~~~~grvpVia-Gvg~~~t~~ai~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 62 ELELFAAVQKVVNGRVPLIA-GVGTNDTRDSIEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHHHHSCSSSCEEE-ECCCSSHHHHHHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHHHHhCCCCcEEE-eCCCcCHHHHHHHHHHHHhcCCCcEEEEcC
Confidence 34444443 479998 883 4444 445667897 9998865
No 315
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=76.74 E-value=37 Score=29.50 Aligned_cols=24 Identities=21% Similarity=0.189 Sum_probs=19.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcc
Q 039466 128 KRDMAATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTv 151 (263)
+-..+.++.+.|+++|++++++..
T Consensus 88 ~t~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 88 ATHEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcC
Confidence 345567889999999999998864
No 316
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=76.70 E-value=3 Score=37.96 Aligned_cols=41 Identities=7% Similarity=0.019 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
..+|+.+++|++.+++||+.=| +.+++|++++++.| +|.|.
T Consensus 244 ~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ 286 (393)
T 2og9_A 244 AYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLM 286 (393)
T ss_dssp TTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred cccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEe
Confidence 3479999999999999999999 78999999999976 77764
No 317
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=76.64 E-value=3.2 Score=37.56 Aligned_cols=47 Identities=19% Similarity=0.181 Sum_probs=38.2
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE--cCCCC
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV--SNHGA 248 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V--SNHGG 248 (263)
.-+|+.+++|++.+++||..=+ +.+++|++.+++.| +|.|.+ +..||
T Consensus 234 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GG 284 (372)
T 3tj4_A 234 YDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGG 284 (372)
T ss_dssp TTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTH
T ss_pred chhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeCccccCC
Confidence 3478999999999999999998 78999999999976 676643 34444
No 318
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=76.49 E-value=3.2 Score=37.83 Aligned_cols=47 Identities=13% Similarity=0.002 Sum_probs=39.4
Q ss_pred CCCHHHHHHHHh-hcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE--cCCCC
Q 039466 202 SLSWKDIEWLRS-ITNLPILIKG-VLTREDAIKAVEVG-VAGIIV--SNHGA 248 (263)
Q Consensus 202 ~~~W~dl~~lr~-~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V--SNHGG 248 (263)
.-+|+.+++|++ .+++||+.=| +.+++|++++++.| +|.|.+ +..||
T Consensus 232 ~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 283 (401)
T 2hzg_A 232 AGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGG 283 (401)
T ss_dssp TTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTS
T ss_pred ccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCC
Confidence 348999999999 9999999999 78999999999865 888876 34454
No 319
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=76.45 E-value=34 Score=29.51 Aligned_cols=45 Identities=24% Similarity=0.323 Sum_probs=36.3
Q ss_pred CCCCHHHHHHHHhhcC--CCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 201 PSLSWKDIEWLRSITN--LPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~~--lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+..|-++++-+++..+ +||-.-| |-+.+||...+++|++=|=.|+
T Consensus 199 ~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aGA~RiGtS~ 246 (260)
T 3r12_A 199 GGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGADRIGTSS 246 (260)
T ss_dssp CCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred CCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeecch
Confidence 4567889999999876 5566656 9999999999999999776653
No 320
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=76.42 E-value=37 Score=29.34 Aligned_cols=25 Identities=16% Similarity=0.268 Sum_probs=19.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccC
Q 039466 128 KRDMAATLVQRAERNGFMALVLTAD 152 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD 152 (263)
+-..+.++.+.|+++|++++++..=
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~~P 104 (292)
T 2vc6_A 80 STAEAIAFVRHAQNAGADGVLIVSP 104 (292)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred cHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 4456778899999999999987653
No 321
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=76.30 E-value=5.4 Score=42.64 Aligned_cols=41 Identities=15% Similarity=0.343 Sum_probs=33.5
Q ss_pred CHH-HHHHHHhhc-------CCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 204 SWK-DIEWLRSIT-------NLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 204 ~W~-dl~~lr~~~-------~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
.|. -|..+++.. ++|||.=| |.+..|+.+|+-+||+++.++
T Consensus 1044 Pt~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iG 1093 (1479)
T 1ea0_A 1044 PWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIG 1093 (1479)
T ss_dssp CHHHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECC
T ss_pred hHHHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEc
Confidence 443 356665543 69999999 999999999999999999885
No 322
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=76.19 E-value=27 Score=31.87 Aligned_cols=103 Identities=17% Similarity=0.085 Sum_probs=69.4
Q ss_pred HHHHHHHHCCCceeecCCCCccHHHHHHhccccccCHHHHHHHHHHHHHcCCCEEEE-ccCCCCCcchHHHHhhhhhhhh
Q 039466 93 ATARAAASCNTIMVLSFTSSCSIEEVAASCNAAYKKRDMAATLVQRAERNGFMALVL-TADTPRLDRREADIKNKMIAQQ 171 (263)
Q Consensus 93 a~AraA~~~gi~~~lss~s~~sieeV~~~~~~~~~d~~~~~~li~ra~~aG~~al~v-TvD~~~~g~R~~d~r~~~~~p~ 171 (263)
.+-+.+++.|-|++||+..+ +++||..+ ++...+.|..-+++ +.-+. |+-|
T Consensus 149 pLL~~va~~gKPViLStGma-Tl~Ei~~A--------------ve~i~~~Gn~~iiLlhc~s~------------YPtp- 200 (385)
T 1vli_A 149 PLLKYVARLNRPMIFSTAGA-EISDVHEA--------------WRTIRAEGNNQIAIMHCVAK------------YPAP- 200 (385)
T ss_dssp HHHHHHHTTCSCEEEECTTC-CHHHHHHH--------------HHHHHTTTCCCEEEEEECSS------------SSCC-
T ss_pred HHHHHHHhcCCeEEEECCCC-CHHHHHHH--------------HHHHHHCCCCcEEEEeccCC------------CCCC-
Confidence 78899999999999999986 89988654 33445678744443 32111 1100
Q ss_pred hhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhc-CCCEEEEe-cCC-HHHHHHHHHcCCCEEEEcCCCC
Q 039466 172 LKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSIT-NLPILIKG-VLT-REDAIKAVEVGVAGIIVSNHGA 248 (263)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~-~lPiilKG-I~s-~eDA~~a~~~G~dgI~VSNHGG 248 (263)
...++...|..|++.+ ++||..-+ -.. ..-+..|+.+||+-|=+-..=-
T Consensus 201 ----------------------------~~~~nL~aI~~Lk~~f~~lpVG~SdHt~G~~~~~~AAvAlGA~iIEkHftld 252 (385)
T 1vli_A 201 ----------------------------PEYSNLSVIPMLAAAFPEAVIGFSDHSEHPTEAPCAAVRLGAKLIEKHFTID 252 (385)
T ss_dssp ----------------------------GGGCCTTHHHHHHHHSTTSEEEEEECCSSSSHHHHHHHHTTCSEEEEEBCSC
T ss_pred ----------------------------hhhcCHHHHHHHHHHcCCCCEEeCCCCCCchHHHHHHHHcCCCEEEeCCCcc
Confidence 1234556788899999 89997765 455 7889999999999554443333
Q ss_pred CCC
Q 039466 249 RQL 251 (263)
Q Consensus 249 Rql 251 (263)
|.+
T Consensus 253 ra~ 255 (385)
T 1vli_A 253 KNL 255 (385)
T ss_dssp TTS
T ss_pred ccC
Confidence 444
No 323
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=76.18 E-value=28 Score=30.07 Aligned_cols=77 Identities=19% Similarity=0.143 Sum_probs=42.0
Q ss_pred ceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc----c-ccCHHHHHHHH
Q 039466 74 SIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA----A-YKKRDMAATLV 136 (263)
Q Consensus 74 Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~----~-~~d~~~~~~li 136 (263)
|.++.|+. .+-.+.++-..+++-.-+.|+- +++||.+ +.|.|| +.+...+ + -.+-..+.++.
T Consensus 5 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gvi~Gvg~~~t~~ai~la 83 (286)
T 2r91_A 5 APVITTFR-GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRVIVQVASLNADEAIALA 83 (286)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSEEEECCCSSHHHHHHHH
T ss_pred EeEecCcC-CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCEEEeeCCCCHHHHHHHH
Confidence 44455554 4433344444555555556653 3344433 234444 1222222 1 12445677889
Q ss_pred HHHHHcCCCEEEEcc
Q 039466 137 QRAERNGFMALVLTA 151 (263)
Q Consensus 137 ~ra~~aG~~al~vTv 151 (263)
+.|+++|++++++..
T Consensus 84 ~~A~~~Gadavlv~~ 98 (286)
T 2r91_A 84 KYAESRGAEAVASLP 98 (286)
T ss_dssp HHHHHTTCSEEEECC
T ss_pred HHHHhcCCCEEEEcC
Confidence 999999999998874
No 324
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=76.05 E-value=0.96 Score=37.66 Aligned_cols=41 Identities=17% Similarity=0.217 Sum_probs=33.4
Q ss_pred CHHHHHHHHhhc--CCCEEEEecCCHHHHHHHHHcCCCEEEEc
Q 039466 204 SWKDIEWLRSIT--NLPILIKGVLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~--~lPiilKGI~s~eDA~~a~~~G~dgI~VS 244 (263)
+.+.++++|+.. +.||++=|=.+++.+..++++|+|+|+|+
T Consensus 149 ~~~~i~~lr~~~~~~~~i~v~GGI~~~~~~~~~~aGad~ivvG 191 (216)
T 1q6o_A 149 GEADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIPIHVFIAG 191 (216)
T ss_dssp CHHHHHHHHHHHHTTCEEEEESSCCGGGGGGGTTSCCSEEEES
T ss_pred CHHHHHHHHHhcCCCCcEEEECCcChhhHHHHHHcCCCEEEEe
Confidence 358899999887 57788887445888999999999999984
No 325
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=75.48 E-value=21 Score=31.07 Aligned_cols=142 Identities=15% Similarity=0.254 Sum_probs=77.1
Q ss_pred ChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc------cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHH
Q 039466 88 PEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA------AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREA 161 (263)
Q Consensus 88 ~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~------~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~ 161 (263)
.+|-..+.+.|++.|++++.+-+...+++.+.+..+- -.+|- .+++.+.+.|. .|-+.+...+.=+
T Consensus 72 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~~d~~kIga~~~~n~----~ll~~~a~~~k---PV~lk~G~~~t~~- 143 (280)
T 2qkf_A 72 EEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEVCDVIQLPAFLARQT----DLVVAMAKTGN---VVNIKKPQFLSPS- 143 (280)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHHCSEEEECGGGTTBH----HHHHHHHHTCC---EEEEECCTTSCGG-
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhhCCEEEECcccccCH----HHHHHHHcCCC---cEEEECCCCCCHH-
Confidence 4565678889999999999888888888888776331 12333 36666655543 3333333321111
Q ss_pred HHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhc-CCCEEE----------------Eec
Q 039466 162 DIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSIT-NLPILI----------------KGV 224 (263)
Q Consensus 162 d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~-~lPiil----------------KGI 224 (263)
++.+.... ++.... .++---...+ .+ +..+...+-..|..+++.. ++||++ .|-
T Consensus 144 e~~~A~~~--i~~~Gn---~~i~L~~rg~--~~--~~~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~~~~~~~~s~g~ 214 (280)
T 2qkf_A 144 QMKNIVEK--FHEAGN---GKLILCERGS--SF--GYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGR 214 (280)
T ss_dssp GHHHHHHH--HHHTTC---CCEEEEECCE--EC--STTCEECCTTHHHHHHHHTTTCCEEEEHHHHCC----------CH
T ss_pred HHHHHHHH--HHHcCC---CeEEEEECCC--CC--CCCccccCHHHHHHHHHhCCCCCEEEECCCCccccCccccccCCc
Confidence 22221110 000000 0000000000 00 0001114566889999998 899999 331
Q ss_pred --CCHHHHHHHHHcCCCEEEEcCC
Q 039466 225 --LTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 225 --~s~eDA~~a~~~G~dgI~VSNH 246 (263)
+-..-++.|+..|++|+++=-|
T Consensus 215 ~~~~~~~a~aava~Ga~G~~IE~H 238 (280)
T 2qkf_A 215 RAQALDLALAGMATRLAGLFLESH 238 (280)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEC-
T ss_pred hhhHHHHHHHHHHcCCCEEEEeec
Confidence 1155677888899999999888
No 326
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=75.07 E-value=4.4 Score=38.87 Aligned_cols=39 Identities=15% Similarity=0.314 Sum_probs=35.0
Q ss_pred HHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 207 DIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 207 dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+....++..++|||.=| |.+.-|..+|+.+|+|.|++.+
T Consensus 375 ~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMlGs 414 (556)
T 4af0_A 375 AVAEFASRFGIPCIADGGIGNIGHIAKALALGASAVMMGG 414 (556)
T ss_dssp HHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred HHHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEEEEch
Confidence 56667778899999999 9999999999999999999954
No 327
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=75.04 E-value=5.9 Score=33.35 Aligned_cols=38 Identities=24% Similarity=0.201 Sum_probs=22.6
Q ss_pred HHHHHHHhhcC--CCEEEEecCC-HHHHHHHHHcCCCEEEEc
Q 039466 206 KDIEWLRSITN--LPILIKGVLT-REDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 206 ~dl~~lr~~~~--lPiilKGI~s-~eDA~~a~~~G~dgI~VS 244 (263)
+.++.||+..+ .+++.=||-. ..|. .++++|+|.|+|+
T Consensus 162 ~e~~~ir~~~~~~~~iv~PGI~~~g~~p-~~~~aGad~iVvG 202 (228)
T 3m47_A 162 ERLSRLREIIGQDSFLISPGVGAQGGDP-GETLRFADAIIVG 202 (228)
T ss_dssp HHHHHHHHHHCSSSEEEECC----------CGGGTCSEEEEC
T ss_pred HHHHHHHHhcCCCCEEEecCcCcCCCCH-hHHHcCCCEEEEC
Confidence 45667777765 5677777731 1256 7889999988884
No 328
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=75.02 E-value=43 Score=29.40 Aligned_cols=79 Identities=15% Similarity=0.125 Sum_probs=46.5
Q ss_pred cceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc-------c-ccCHHHH
Q 039466 73 ASIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA-------A-YKKRDMA 132 (263)
Q Consensus 73 ~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~-------~-~~d~~~~ 132 (263)
.|.++.|+.-.+-.+.++-..+++-.-+.|+- +++||.+ +.|.|| +.+...+ + -.+-..+
T Consensus 27 ~~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~a 106 (315)
T 3si9_A 27 VTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEA 106 (315)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHH
T ss_pred eEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHH
Confidence 45556666533333444444666666677763 3445443 245554 2232222 1 2355678
Q ss_pred HHHHHHHHHcCCCEEEEcc
Q 039466 133 ATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 133 ~~li~ra~~aG~~al~vTv 151 (263)
.++.+.|+++|++++++..
T Consensus 107 i~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 107 VELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 8899999999999998864
No 329
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=74.76 E-value=9.5 Score=34.02 Aligned_cols=44 Identities=20% Similarity=0.440 Sum_probs=33.5
Q ss_pred HHHHHHHhhc-CCCEEEEec----CCHHHHHHHHHcCCCEEE--EcCCCCC
Q 039466 206 KDIEWLRSIT-NLPILIKGV----LTREDAIKAVEVGVAGII--VSNHGAR 249 (263)
Q Consensus 206 ~dl~~lr~~~-~lPiilKGI----~s~eDA~~a~~~G~dgI~--VSNHGGR 249 (263)
+-+++|++.+ ++||-+=.= +...-+..|+++||+.|. |++-|||
T Consensus 202 ~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~tv~GlG~~ 252 (337)
T 3ble_A 202 QGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHASINGLGER 252 (337)
T ss_dssp HHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSST
T ss_pred HHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEEeccccccc
Confidence 3477888888 678755541 677788999999999999 5566775
No 330
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=74.47 E-value=4.4 Score=36.87 Aligned_cols=42 Identities=17% Similarity=0.343 Sum_probs=36.7
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|++.+++||+.=| +.+++|++.+++.| +|.|.+
T Consensus 226 ~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 269 (397)
T 2qde_A 226 AWDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMI 269 (397)
T ss_dssp TTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEE
Confidence 3479999999999999999998 78999999999865 787765
No 331
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=74.44 E-value=15 Score=31.89 Aligned_cols=73 Identities=22% Similarity=0.198 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..++++++..+.|++.|++.--+-- ...+++++
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v~GtTGE--------------------------------------------~~~Ls~eE 53 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFVNGTTGL--------------------------------------------GPALSKDE 53 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETSTTTT--------------------------------------------GGGSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccC--------------------------------------------hhhCCHHH
Confidence 6677889999988999999886443311 02345543
Q ss_pred ----HHHHHhhcCCCEEEEecC--C----HHHHHHHHHcCCCEEEEcCC
Q 039466 208 ----IEWLRSITNLPILIKGVL--T----REDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 208 ----l~~lr~~~~lPiilKGI~--s----~eDA~~a~~~G~dgI~VSNH 246 (263)
++..++..+. |+=||. + .+-++.|.++|+||++|..-
T Consensus 54 r~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 100 (288)
T 2nuw_A 54 KRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSP 100 (288)
T ss_dssp HHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCC
T ss_pred HHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3444455555 777884 3 34455566789999998653
No 332
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=74.39 E-value=36 Score=29.87 Aligned_cols=78 Identities=18% Similarity=0.078 Sum_probs=44.5
Q ss_pred cceeecccCC-cccCCChhHHHHHHHHHHCCCcee--ecCCC---CccHHH-------HHHhccc-------cccCHHHH
Q 039466 73 ASIIIAPTGL-HKLANPEGEVATARAAASCNTIMV--LSFTS---SCSIEE-------VAASCNA-------AYKKRDMA 132 (263)
Q Consensus 73 ~Pi~iaP~~~-~~l~~~~ge~a~AraA~~~gi~~~--lss~s---~~siee-------V~~~~~~-------~~~d~~~~ 132 (263)
.|.++.|+.- .+-.+.++-..+++-.-+.|+--+ +||.+ +.|.|| +.+...+ +-.+-..+
T Consensus 16 ~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~a 95 (316)
T 3e96_A 16 SGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTA 95 (316)
T ss_dssp EECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHH
T ss_pred EEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHH
Confidence 4555566654 333344444466666666776333 34332 234544 2222222 22355667
Q ss_pred HHHHHHHHHcCCCEEEEc
Q 039466 133 ATLVQRAERNGFMALVLT 150 (263)
Q Consensus 133 ~~li~ra~~aG~~al~vT 150 (263)
.++.+.|+++|++++++.
T Consensus 96 i~la~~A~~~Gadavlv~ 113 (316)
T 3e96_A 96 IELGNAAKAAGADAVMIH 113 (316)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhcCCCEEEEc
Confidence 788999999999999986
No 333
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=74.39 E-value=21 Score=30.00 Aligned_cols=37 Identities=24% Similarity=0.302 Sum_probs=30.1
Q ss_pred HHHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEE
Q 039466 205 WKDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGII 242 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~ 242 (263)
-+.++.+++ .+++|.+=.|-++++.+++.+.|||||+
T Consensus 201 ~~~v~~~~~-~G~~v~~wTvn~~~~~~~l~~~GvdgIi 237 (252)
T 2pz0_A 201 PELVEGCKK-NGVKLFPWTVDRKEDMERMIKAGVDGII 237 (252)
T ss_dssp HHHHHHHHH-TTCEECCBCCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHH-CCCEEEEECCCCHHHHHHHHHcCCCEEE
Confidence 344555655 4788888889999999999999999986
No 334
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=74.24 E-value=3 Score=37.87 Aligned_cols=47 Identities=21% Similarity=0.192 Sum_probs=39.0
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE--cCCCC
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV--SNHGA 248 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V--SNHGG 248 (263)
.-+|+.+++|++.+++||+.=+ +.+++|++++++.| +|.|.+ +.-||
T Consensus 236 ~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 286 (392)
T 2poz_A 236 PFDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGIIQPDIGTAGG 286 (392)
T ss_dssp TTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSEECCCTTTSSC
T ss_pred cccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCC
Confidence 3479999999999999999988 78999999999876 787755 44455
No 335
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=74.13 E-value=2.2 Score=36.27 Aligned_cols=42 Identities=19% Similarity=0.325 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHhhcCCCEEEEecCCHHHHHHHHH-cCCCEEEEcC
Q 039466 202 SLSWKDIEWLRSITNLPILIKGVLTREDAIKAVE-VGVAGIIVSN 245 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKGI~s~eDA~~a~~-~G~dgI~VSN 245 (263)
.++|+-++.+.. +.|++|=|=+++|....|++ .+..||+||.
T Consensus 161 ~fDW~~~~~~~~--~~p~iLAGGL~peNV~~Ai~~~~P~gVDVsS 203 (228)
T 4aaj_A 161 LHDLRVSSLVAR--KIPVIVAGGLNAENVEEVIKVVKPYGVDVSS 203 (228)
T ss_dssp -CCCHHHHHHHH--HSCEEEESSCCTTTHHHHHHHHCCSEEEESG
T ss_pred cCChHHHHHhhh--cCCeEEECCCCHHHHHHHHHHhCCCEEEeCC
Confidence 579998887765 47999999889999999887 7999999986
No 336
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=74.05 E-value=5.1 Score=36.06 Aligned_cols=41 Identities=20% Similarity=0.191 Sum_probs=35.8
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
-+|+.+++|++.+++||..=+ +.+++|++.+++.| +|.|.+
T Consensus 223 ~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 265 (367)
T 3dg3_A 223 DDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISI 265 (367)
T ss_dssp TSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEE
T ss_pred ccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 478899999999999999998 78999999999876 777654
No 337
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=73.87 E-value=44 Score=28.97 Aligned_cols=78 Identities=19% Similarity=0.091 Sum_probs=45.7
Q ss_pred ceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc-------c-ccCHHHHH
Q 039466 74 SIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA-------A-YKKRDMAA 133 (263)
Q Consensus 74 Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~-------~-~~d~~~~~ 133 (263)
|.++.|+.-.+-.+.++-..+++-.-+.|+- ++.||.+ +.|.|| +.+...+ + -.+-..+.
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai 92 (297)
T 3flu_A 13 VALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAI 92 (297)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHH
T ss_pred EeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHH
Confidence 4455565433333344444666666667764 4445544 235554 2222222 1 13556788
Q ss_pred HHHHHHHHcCCCEEEEcc
Q 039466 134 TLVQRAERNGFMALVLTA 151 (263)
Q Consensus 134 ~li~ra~~aG~~al~vTv 151 (263)
++.+.|+++|++++++..
T Consensus 93 ~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 93 ALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp HHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECC
Confidence 899999999999998864
No 338
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=73.84 E-value=43 Score=28.89 Aligned_cols=24 Identities=21% Similarity=0.281 Sum_probs=19.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcc
Q 039466 128 KRDMAATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTv 151 (263)
+-..+.++.+.|+++|++++++..
T Consensus 81 ~t~~ai~la~~a~~~Gadavlv~~ 104 (292)
T 2ojp_A 81 ATAEAISLTQRFNDSGIVGCLTVT 104 (292)
T ss_dssp SHHHHHHHHHHTTTSSCSEEEEEC
T ss_pred cHHHHHHHHHHHHhcCCCEEEECC
Confidence 445677888899999999998874
No 339
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=73.75 E-value=44 Score=28.89 Aligned_cols=78 Identities=18% Similarity=0.078 Sum_probs=44.1
Q ss_pred ceeecccCCcccCCChhHHHHHHHHHH-CCCc--eeecCCC---CccHHH-------HHHhccc-------c-ccCHHHH
Q 039466 74 SIIIAPTGLHKLANPEGEVATARAAAS-CNTI--MVLSFTS---SCSIEE-------VAASCNA-------A-YKKRDMA 132 (263)
Q Consensus 74 Pi~iaP~~~~~l~~~~ge~a~AraA~~-~gi~--~~lss~s---~~siee-------V~~~~~~-------~-~~d~~~~ 132 (263)
|.++.|+.-.+-.+.++-..+++-.-+ .|+- ++.||.+ +.|.|| +.+...+ + -.+-..+
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~a 88 (293)
T 1f6k_A 9 SALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEA 88 (293)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHH
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHH
Confidence 445556543333334444466666666 6763 3445433 345554 2222222 1 1245667
Q ss_pred HHHHHHHHHcCCCEEEEcc
Q 039466 133 ATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 133 ~~li~ra~~aG~~al~vTv 151 (263)
.++.+.|+++|++++++..
T Consensus 89 i~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 89 VELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 7889999999999998874
No 340
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=73.72 E-value=3.9 Score=45.20 Aligned_cols=118 Identities=9% Similarity=-0.023 Sum_probs=72.0
Q ss_pred HHHHHHHHHCCCce--eecCCCCccHHHHHH---hccc--c--ccCHHHHHHHHHHHHHcCCCE-EEEccCCCCCcchHH
Q 039466 92 VATARAAASCNTIM--VLSFTSSCSIEEVAA---SCNA--A--YKKRDMAATLVQRAERNGFMA-LVLTADTPRLDRREA 161 (263)
Q Consensus 92 ~a~AraA~~~gi~~--~lss~s~~sieeV~~---~~~~--~--~~d~~~~~~li~ra~~aG~~a-l~vTvD~~~~g~R~~ 161 (263)
..+.+.+.+.|+++ +.-+...-+.|+..+ ..+- + ...-....+.+.+++++|+++ |+|.++-.-.|--
T Consensus 663 ~~~~~~~~~~gv~i~~v~~~ag~p~~~~~~~~i~~lG~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH-- 740 (2051)
T 2uv8_G 663 IPLIKELRSKGYPIQFLTIGAGVPSLEVASEYIETLGLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGRGGGH-- 740 (2051)
T ss_dssp HHHHHHHHHTTCSEEEEEEESSCCCHHHHHHHHHHSCCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEE--
T ss_pred HHHHHHHHHcCCCcceEEecCCCCchhhHHHHHHHcCCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccCcCCC--
Confidence 47889999999998 443344444443322 2211 1 122233445566777889888 4555552211000
Q ss_pred HHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHH------
Q 039466 162 DIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILIKG-VLTREDAIKAV------ 234 (263)
Q Consensus 162 d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~------ 234 (263)
. + .+--...+..-+..+++..++|||.=| |-+.++...|+
T Consensus 741 ---------------------~--------g----~~d~~~~~l~l~~~v~~~~~ipviaaGGi~dg~~~~aaL~g~w~~ 787 (2051)
T 2uv8_G 741 ---------------------H--------S----FEDAHTPMLQMYSKIRRHPNIMLIFGSGFGSADDTYPYLTGEWST 787 (2051)
T ss_dssp ---------------------C--------C----SCCSSHHHHHHHHHHTTCTTBCCEEESSCCSHHHHTHHHHTCGGG
T ss_pred ---------------------C--------C----cccccccHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHcccccc
Confidence 0 0 000011133457889999999999998 99999999999
Q ss_pred -----HcCCCEEEEc
Q 039466 235 -----EVGVAGIIVS 244 (263)
Q Consensus 235 -----~~G~dgI~VS 244 (263)
..|+|||.+.
T Consensus 788 ~~g~~~lgadGv~~G 802 (2051)
T 2uv8_G 788 KFDYPPMPFDGFLFG 802 (2051)
T ss_dssp TTTCCCCCCSCEECS
T ss_pred ccCccCCCCceeeec
Confidence 7999999874
No 341
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=73.69 E-value=3.4 Score=35.28 Aligned_cols=41 Identities=15% Similarity=0.035 Sum_probs=34.9
Q ss_pred HHHHHHHHhhc-----CCCEEEEecCCHHHHHHHHH--cCCCEEEEcC
Q 039466 205 WKDIEWLRSIT-----NLPILIKGVLTREDAIKAVE--VGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~-----~lPiilKGI~s~eDA~~a~~--~G~dgI~VSN 245 (263)
-+.|+++|+.. +.||.+=|=.+.+++.++++ +|+|++++..
T Consensus 171 l~ki~~lr~~~~~~~~~~~I~vdGGI~~~~~~~~~~~~aGad~~VvGS 218 (237)
T 3cu2_A 171 LDRVIQVEKRLGNRRVEKLINIDGSMTLELAKYFKQGTHQIDWLVSGS 218 (237)
T ss_dssp HHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHHHHHSSSCCCCEEECG
T ss_pred HHHHHHHHHHHHhcCCCceEEEECCcCHHHHHHHHHhCCCCcEEEEee
Confidence 46678888776 58999999778999999999 9999998864
No 342
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=73.34 E-value=36 Score=29.38 Aligned_cols=78 Identities=15% Similarity=0.063 Sum_probs=43.3
Q ss_pred ceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH---HH----Hhccc----c-ccCHHHHHHHH
Q 039466 74 SIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE---VA----ASCNA----A-YKKRDMAATLV 136 (263)
Q Consensus 74 Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee---V~----~~~~~----~-~~d~~~~~~li 136 (263)
|.++.|+.-.+-.+.++-..+++-.-+.|+- +++||.+ +.|.|| |. +...+ + -.+-..+.++.
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~gViaGvg~~~t~~ai~la 84 (288)
T 2nuw_A 5 SPIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHKLIFQVGSLNLNDVMELV 84 (288)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSCEEEECCCSCHHHHHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCeEEeeCCCCHHHHHHHH
Confidence 4445565433333344444666665566663 3445543 245554 21 12222 1 12445677889
Q ss_pred HHHHHcCCCEEEEcc
Q 039466 137 QRAERNGFMALVLTA 151 (263)
Q Consensus 137 ~ra~~aG~~al~vTv 151 (263)
+.|+++|++++++..
T Consensus 85 ~~A~~~Gadavlv~~ 99 (288)
T 2nuw_A 85 KFSNEMDILGVSSHS 99 (288)
T ss_dssp HHHHTSCCSEEEECC
T ss_pred HHHHhcCCCEEEEcC
Confidence 999999999998873
No 343
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=73.25 E-value=3.4 Score=36.44 Aligned_cols=41 Identities=22% Similarity=0.420 Sum_probs=33.3
Q ss_pred HHHHHHHhhcC--CCEEEEecCCHHHHHHHHHcCCCEEEEcCCC
Q 039466 206 KDIEWLRSITN--LPILIKGVLTREDAIKAVEVGVAGIIVSNHG 247 (263)
Q Consensus 206 ~dl~~lr~~~~--lPiilKGI~s~eDA~~a~~~G~dgI~VSNHG 247 (263)
+.++.+|+..+ .++++ ++.+.++++.|++.|+|+|.++|-+
T Consensus 187 ~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~~ 229 (294)
T 3c2e_A 187 NAVKNARAVCGFAVKIEV-ECLSEDEATEAIEAGADVIMLDNFK 229 (294)
T ss_dssp HHHHHHHHHHCTTSCEEE-ECSSSHHHHHHHHHTCSEEECCC--
T ss_pred HHHHHHHHhcCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCCC
Confidence 46888888775 46666 8999999999999999999999954
No 344
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=73.17 E-value=19 Score=31.51 Aligned_cols=74 Identities=24% Similarity=0.353 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..++++++..+.|++.|++.--+-- . ..+++++
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE-------------~-------------------------------~~Ls~eE 66 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVGGTTGE-------------S-------------------------------PTLTSEE 66 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTT-------------G-------------------------------GGSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccC-------------h-------------------------------hhCCHHH
Confidence 6677889999998999999886443311 0 2334433
Q ss_pred ----HHHHHhhc--CCCEEEEecC--C----HHHHHHHHHcCCCEEEEcCC
Q 039466 208 ----IEWLRSIT--NLPILIKGVL--T----REDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 208 ----l~~lr~~~--~lPiilKGI~--s----~eDA~~a~~~G~dgI~VSNH 246 (263)
++..++.. ++|||+ ||. + .+-++.|.++|+||++|..-
T Consensus 67 r~~v~~~~~~~~~grvpVia-Gvg~~~t~~ai~la~~A~~~Gadavlv~~P 116 (301)
T 1xky_A 67 KVALYRHVVSVVDKRVPVIA-GTGSNNTHASIDLTKKATEVGVDAVMLVAP 116 (301)
T ss_dssp HHHHHHHHHHHHTTSSCEEE-ECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHhCCCceEEe-CCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 33444443 478774 773 3 44455677899999998653
No 345
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=73.16 E-value=45 Score=28.82 Aligned_cols=78 Identities=19% Similarity=0.142 Sum_probs=45.4
Q ss_pred ceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc-------c-ccCHHHHH
Q 039466 74 SIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA-------A-YKKRDMAA 133 (263)
Q Consensus 74 Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~-------~-~~d~~~~~ 133 (263)
|.++.|+.-.+-.+.++-..+++-.-+.|+- +++||.+ +.|.|| +.+...+ + -.+-..+.
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai 88 (294)
T 3b4u_A 9 AALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAA 88 (294)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHH
T ss_pred EEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHH
Confidence 4455565433333344444666666667763 3455544 345554 2223222 1 12556678
Q ss_pred HHHHHHHHcCCCEEEEcc
Q 039466 134 TLVQRAERNGFMALVLTA 151 (263)
Q Consensus 134 ~li~ra~~aG~~al~vTv 151 (263)
++.+.|+++|++++++..
T Consensus 89 ~la~~A~~~Gadavlv~~ 106 (294)
T 3b4u_A 89 DQSAEALNAGARNILLAP 106 (294)
T ss_dssp HHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHhcCCCEEEEcC
Confidence 899999999999999874
No 346
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=73.08 E-value=46 Score=28.90 Aligned_cols=78 Identities=17% Similarity=0.176 Sum_probs=44.3
Q ss_pred ceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc-------cc-cCHHHHH
Q 039466 74 SIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA-------AY-KKRDMAA 133 (263)
Q Consensus 74 Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~-------~~-~d~~~~~ 133 (263)
|-++.|+.-.+-.+.++-..+++-.-+.|+- +++||.+ +.|.|| +.+...+ +- .+-..+.
T Consensus 18 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai 97 (301)
T 1xky_A 18 TAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASI 97 (301)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHH
T ss_pred EeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHH
Confidence 4445555433333344444666666666763 3455543 345554 2222222 11 2556678
Q ss_pred HHHHHHHHcCCCEEEEcc
Q 039466 134 TLVQRAERNGFMALVLTA 151 (263)
Q Consensus 134 ~li~ra~~aG~~al~vTv 151 (263)
++.+.|+++|++++++..
T Consensus 98 ~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 98 DLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp HHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHhcCCCEEEEcC
Confidence 889999999999998864
No 347
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=73.02 E-value=14 Score=33.50 Aligned_cols=40 Identities=10% Similarity=0.004 Sum_probs=29.5
Q ss_pred HHHHHHHhhcCC-CEEEEe-----c------CCHHH----HHHHHHcCCCEEEEcC
Q 039466 206 KDIEWLRSITNL-PILIKG-----V------LTRED----AIKAVEVGVAGIIVSN 245 (263)
Q Consensus 206 ~dl~~lr~~~~l-PiilKG-----I------~s~eD----A~~a~~~G~dgI~VSN 245 (263)
+-++.+|+.++- ||.+|= . .+.++ |+.+.+.|+|.|-||+
T Consensus 221 eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~ 276 (377)
T 2r14_A 221 EVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNE 276 (377)
T ss_dssp HHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 557889998853 999991 1 13455 6666689999999987
No 348
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=72.97 E-value=4.2 Score=37.04 Aligned_cols=42 Identities=7% Similarity=-0.026 Sum_probs=36.4
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|++.+++||+.=| +.+++|++++++.| +|.|.+
T Consensus 257 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 300 (398)
T 2pp0_A 257 AYDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQP 300 (398)
T ss_dssp TTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred hhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 3479999999999999999998 78999999999976 777643
No 349
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=72.94 E-value=48 Score=29.02 Aligned_cols=78 Identities=19% Similarity=0.078 Sum_probs=42.8
Q ss_pred ceeeccc-CCcccCCChhHHHHHHHHHHCCCce--eecCCC---CccHHH-------HHHhccc-------cccCHHHHH
Q 039466 74 SIIIAPT-GLHKLANPEGEVATARAAASCNTIM--VLSFTS---SCSIEE-------VAASCNA-------AYKKRDMAA 133 (263)
Q Consensus 74 Pi~iaP~-~~~~l~~~~ge~a~AraA~~~gi~~--~lss~s---~~siee-------V~~~~~~-------~~~d~~~~~ 133 (263)
|.++.|+ .-.+-.+.++-..+++-.-+.|+-- ++||.+ +.|.|| +.+...+ +-.+-..+.
T Consensus 17 ~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai 96 (314)
T 3d0c_A 17 GINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAI 96 (314)
T ss_dssp ECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHH
T ss_pred EeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHH
Confidence 4445555 4333333444446666666666633 334422 345554 1222222 212555677
Q ss_pred HHHHHHHHcCCCEEEEcc
Q 039466 134 TLVQRAERNGFMALVLTA 151 (263)
Q Consensus 134 ~li~ra~~aG~~al~vTv 151 (263)
++.+.|+++|++++++..
T Consensus 97 ~la~~A~~~Gadavlv~~ 114 (314)
T 3d0c_A 97 ELGKSAIDSGADCVMIHQ 114 (314)
T ss_dssp HHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEECC
Confidence 889999999999998873
No 350
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=72.83 E-value=47 Score=28.88 Aligned_cols=79 Identities=16% Similarity=0.114 Sum_probs=45.6
Q ss_pred cceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc-------cc-cCHHHH
Q 039466 73 ASIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA-------AY-KKRDMA 132 (263)
Q Consensus 73 ~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~-------~~-~d~~~~ 132 (263)
.|.++.|+.-.+-.+.++-..+++-.-+.|+- +++||.+ +.|.|| +.+...+ +- .+-..+
T Consensus 16 ~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~a 95 (303)
T 2wkj_A 16 MAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAES 95 (303)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHH
T ss_pred EEeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHH
Confidence 34455666433333444444666666667763 3455544 345554 2222222 11 245667
Q ss_pred HHHHHHHHHcCCCEEEEcc
Q 039466 133 ATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 133 ~~li~ra~~aG~~al~vTv 151 (263)
.++.+.|+++|++++++..
T Consensus 96 i~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhCCCCEEEecC
Confidence 8889999999999998874
No 351
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=72.81 E-value=15 Score=31.49 Aligned_cols=24 Identities=8% Similarity=0.181 Sum_probs=17.6
Q ss_pred HHHHHHHcCCCEEEEccCCCCCcc
Q 039466 135 LVQRAERNGFMALVLTADTPRLDR 158 (263)
Q Consensus 135 li~ra~~aG~~al~vTvD~~~~g~ 158 (263)
.++.+..+||+.+++..--.+...
T Consensus 29 ~~e~a~~~g~D~vilDlEhav~~~ 52 (261)
T 3qz6_A 29 IVRIYAEAGLDYFIVDCEHAAYTF 52 (261)
T ss_dssp HHHHHHHTTCSEEEEESSSSCCCH
T ss_pred HHHHHhcCCcCEEEEeccCCCCCH
Confidence 456677899999999887655433
No 352
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=72.75 E-value=50 Score=31.80 Aligned_cols=41 Identities=15% Similarity=0.033 Sum_probs=29.2
Q ss_pred HHHHHHHHhhc--CCCEEEE--------ecCCHHH----HHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSIT--NLPILIK--------GVLTRED----AIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~~--~lPiilK--------GI~s~eD----A~~a~~~G~dgI~VSN 245 (263)
-+-++.+|+.+ +.||.+| |=.+.+| |+.+.++|+|.|.||+
T Consensus 195 ~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~ 249 (671)
T 1ps9_A 195 VEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGI 249 (671)
T ss_dssp HHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCC
Confidence 35688899988 6888875 1134555 4455578999999986
No 353
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=72.71 E-value=9.4 Score=33.62 Aligned_cols=23 Identities=13% Similarity=-0.019 Sum_probs=19.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEc
Q 039466 128 KRDMAATLVQRAERNGFMALVLT 150 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vT 150 (263)
|.+..++++++..+.|+++|++.
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v~ 49 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCIL 49 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEES
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC
Confidence 66778899999989999988864
No 354
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=72.70 E-value=16 Score=31.77 Aligned_cols=73 Identities=22% Similarity=0.246 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..++++++..+.|++.|++.--+-- ...+++++
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~~~GttGE--------------------------------------------~~~Ls~eE 53 (293)
T 1w3i_A 18 DKEKLKIHAENLIRKGIDKLFVNGTTGL--------------------------------------------GPSLSPEE 53 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTT--------------------------------------------GGGSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccC--------------------------------------------hhhCCHHH
Confidence 6677889999988999999886443311 02344433
Q ss_pred ----HHHHHhhcCCCEEEEecC--CHHHH----HHHHHcCCCEEEEcCC
Q 039466 208 ----IEWLRSITNLPILIKGVL--TREDA----IKAVEVGVAGIIVSNH 246 (263)
Q Consensus 208 ----l~~lr~~~~lPiilKGI~--s~eDA----~~a~~~G~dgI~VSNH 246 (263)
++..++..+. |+=||. +-+++ +.|.++|+||++|..-
T Consensus 54 r~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 100 (293)
T 1w3i_A 54 KLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAP 100 (293)
T ss_dssp HHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECC
T ss_pred HHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 4555566666 777883 44444 4455689999998653
No 355
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=72.58 E-value=4.7 Score=36.27 Aligned_cols=42 Identities=24% Similarity=0.163 Sum_probs=37.0
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|++.+++||..=+ +.+++|++.+++.| +|.|.+
T Consensus 225 ~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 268 (375)
T 1r0m_A 225 WDDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINL 268 (375)
T ss_dssp TTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEE
T ss_pred cccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEE
Confidence 4578999999999999999998 78999999999876 888765
No 356
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=72.57 E-value=3.4 Score=37.54 Aligned_cols=42 Identities=14% Similarity=0.139 Sum_probs=37.2
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-----CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-----VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-----~dgI~V 243 (263)
.-+|+.+++|++.+++||+.=+ +.+++|++++++.| +|.|.+
T Consensus 247 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~i 294 (392)
T 1tzz_A 247 PLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQF 294 (392)
T ss_dssp TTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECC
T ss_pred hhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEE
Confidence 3479999999999999999998 78999999999987 888754
No 357
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=72.50 E-value=3.2 Score=37.96 Aligned_cols=41 Identities=7% Similarity=-0.025 Sum_probs=36.6
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEE
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~V 243 (263)
-+|+.+++|++.+++||..=+ +.+++|++.+++.|+|.|.+
T Consensus 229 ~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~d~v~~ 270 (393)
T 4dwd_A 229 YHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSGVRMVQP 270 (393)
T ss_dssp TCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHTCCEECC
T ss_pred ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCEEEe
Confidence 378999999999999999988 78999999999988888743
No 358
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=72.24 E-value=5 Score=35.91 Aligned_cols=41 Identities=22% Similarity=0.357 Sum_probs=35.7
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
-+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|.+
T Consensus 221 ~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~ 263 (354)
T 3jva_A 221 RDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINI 263 (354)
T ss_dssp TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred hhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEE
Confidence 479999999999999999988 79999999999864 787754
No 359
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=72.18 E-value=6.4 Score=34.71 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=33.0
Q ss_pred HHHHHHHhhcCC-CEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 206 KDIEWLRSITNL-PILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 206 ~dl~~lr~~~~l-PiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.++.+|+..+- +|++ .+-+.|+++.|+++|+|+|.++|
T Consensus 197 ~ai~~~r~~~~~~kI~v-ev~tlee~~eA~~aGaD~I~ld~ 236 (296)
T 1qap_A 197 QAVEKAFWLHPDVPVEV-EVENLDELDDALKAGADIIMLDN 236 (296)
T ss_dssp HHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEESS
T ss_pred HHHHHHHHhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEECC
Confidence 468888887654 5666 78899999999999999999998
No 360
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=72.07 E-value=3.2 Score=35.20 Aligned_cols=42 Identities=17% Similarity=0.180 Sum_probs=35.6
Q ss_pred CCHHHHHHHHhhc-----CCCEEEEecCCHHHHHHHHHcCCCEEEEc
Q 039466 203 LSWKDIEWLRSIT-----NLPILIKGVLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 203 ~~W~dl~~lr~~~-----~lPiilKGI~s~eDA~~a~~~G~dgI~VS 244 (263)
...+.|+++|+.. +.||.+=|=.+++++.+++++|+|.+|+.
T Consensus 149 ~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~~aGAd~~V~G 195 (231)
T 3ctl_A 149 EMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVG 195 (231)
T ss_dssp THHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHhccCCCceEEEECCcCHHHHHHHHHcCCCEEEEc
Confidence 3567788888875 58899988677999999999999999987
No 361
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=72.04 E-value=5.8 Score=35.52 Aligned_cols=47 Identities=17% Similarity=0.215 Sum_probs=39.0
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE--cCCCC
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV--SNHGA 248 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V--SNHGG 248 (263)
.-+|+.+++|++.+++||+.=+ +.+++|++++++.| +|.|.+ +.-||
T Consensus 219 ~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 269 (368)
T 1sjd_A 219 EEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGG 269 (368)
T ss_dssp TTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTS
T ss_pred hhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCC
Confidence 3478999999999999999998 78999999999876 787765 33455
No 362
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=71.92 E-value=5.2 Score=36.15 Aligned_cols=41 Identities=15% Similarity=0.175 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
.-+|+.+++|++.+++||..=+ +.+++|++.+++.| +|.|.
T Consensus 228 ~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ 270 (377)
T 3my9_A 228 RRHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAIS 270 (377)
T ss_dssp TTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEE
T ss_pred ccCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEE
Confidence 3478999999999999999988 79999999999865 77665
No 363
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=71.72 E-value=13 Score=31.85 Aligned_cols=77 Identities=14% Similarity=0.077 Sum_probs=53.7
Q ss_pred cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCC--C
Q 039466 125 AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDP--S 202 (263)
Q Consensus 125 ~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 202 (263)
+-.|.....+-+++++++|++.+ ++|.-- .. +-| .
T Consensus 35 lsaD~~~L~~~i~~l~~~G~d~l--HvDVmD---------g~--------------------------------FVpnit 71 (246)
T 3inp_A 35 LSADLARLGDDVKAVLAAGADNI--HFDVMD---------NH--------------------------------YVPNLT 71 (246)
T ss_dssp GGSCGGGHHHHHHHHHHTTCCCE--EEEEEB---------SS--------------------------------SSSCBC
T ss_pred hcCChhhHHHHHHHHHHcCCCEE--EEEecC---------CC--------------------------------cCcchh
Confidence 34576667788999999997754 455210 00 112 2
Q ss_pred CCHHHHHHHHhhc-CCCEEEEe-cCCHHHHH-HHHHcCCCEEEEc
Q 039466 203 LSWKDIEWLRSIT-NLPILIKG-VLTREDAI-KAVEVGVAGIIVS 244 (263)
Q Consensus 203 ~~W~dl~~lr~~~-~lPiilKG-I~s~eDA~-~a~~~G~dgI~VS 244 (263)
+..+-++.||+.+ ++|+.++= |.++++.. .++++|+|.|-|-
T Consensus 72 ~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH 116 (246)
T 3inp_A 72 FGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFH 116 (246)
T ss_dssp CCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEEEC
T ss_pred cCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEEEc
Confidence 3457799999999 89998876 67777654 5568999999885
No 364
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=71.63 E-value=51 Score=28.78 Aligned_cols=78 Identities=10% Similarity=-0.006 Sum_probs=46.3
Q ss_pred cceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc------c-ccCHHHHH
Q 039466 73 ASIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA------A-YKKRDMAA 133 (263)
Q Consensus 73 ~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~------~-~~d~~~~~ 133 (263)
.|.++.|+.-.+-.+.++-..+++-.-+.|+- +++||.+ +.|.|| +.+..+. + -.+-..+.
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai 92 (313)
T 3dz1_A 13 FAIAPTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMR 92 (313)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHH
T ss_pred EEEeeCCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHH
Confidence 45555666543333444444677766677763 4445544 345554 2333321 1 23556778
Q ss_pred HHHHHHHHcCCCEEEEc
Q 039466 134 TLVQRAERNGFMALVLT 150 (263)
Q Consensus 134 ~li~ra~~aG~~al~vT 150 (263)
++.+.|+++|++++++.
T Consensus 93 ~la~~A~~~Gadavlv~ 109 (313)
T 3dz1_A 93 RLARLSMDAGAAGVMIA 109 (313)
T ss_dssp HHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 89999999999999985
No 365
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=71.60 E-value=51 Score=28.76 Aligned_cols=79 Identities=9% Similarity=0.024 Sum_probs=45.7
Q ss_pred cceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc-------c-ccCHHHH
Q 039466 73 ASIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA-------A-YKKRDMA 132 (263)
Q Consensus 73 ~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~-------~-~~d~~~~ 132 (263)
.|.++.|+.-.+-.+.++-..+++-.-+.|+- +++||.+ +.|.|| +.+...+ . -.+-..+
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~a 92 (309)
T 3fkr_A 13 FPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVC 92 (309)
T ss_dssp CCBCCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHH
T ss_pred EEeeeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHH
Confidence 35555666543333444444666666666663 4445443 345554 2232222 1 1355667
Q ss_pred HHHHHHHHHcCCCEEEEcc
Q 039466 133 ATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 133 ~~li~ra~~aG~~al~vTv 151 (263)
.++.+.|+++|++++.+..
T Consensus 93 i~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 93 AARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEEcC
Confidence 8899999999999999864
No 366
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=71.38 E-value=28 Score=32.58 Aligned_cols=44 Identities=16% Similarity=0.240 Sum_probs=33.5
Q ss_pred HHHHHHHhhcCCCEEEEec----CCHHHHHHHHHcCCCEEEEc--CCCCC
Q 039466 206 KDIEWLRSITNLPILIKGV----LTREDAIKAVEVGVAGIIVS--NHGAR 249 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKGI----~s~eDA~~a~~~G~dgI~VS--NHGGR 249 (263)
+-+++|++.+++||-+=.= +...-+..|+++||+.|..| .-|+|
T Consensus 191 ~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD~ti~g~ger 240 (464)
T 2nx9_A 191 ELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRVDTAISSMSGT 240 (464)
T ss_dssp HHHHHHHHHCCSCEEEEECCTTSCHHHHHHHHHHTTCSEEEEBCGGGCST
T ss_pred HHHHHHHHhcCCeEEEEECCCCChHHHHHHHHHHhCCCEEEEeccccCCC
Confidence 4578889888888855541 67788999999999999854 45555
No 367
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=71.22 E-value=4.6 Score=36.53 Aligned_cols=42 Identities=14% Similarity=0.004 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|++.+++||+.=+ +.+++|++++++.| +|.|.+
T Consensus 222 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 265 (382)
T 2gdq_A 222 FDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQP 265 (382)
T ss_dssp SSCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred cccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 3479999999999999999988 78999999999976 777754
No 368
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=71.21 E-value=5.3 Score=35.80 Aligned_cols=42 Identities=26% Similarity=0.179 Sum_probs=36.8
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|++.+++||..=+ +.+++|++.+++.| +|.|.+
T Consensus 218 ~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 261 (369)
T 2zc8_A 218 YDDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNV 261 (369)
T ss_dssp TTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred cccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEE
Confidence 3478999999999999999998 78999999999877 787765
No 369
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=71.16 E-value=16 Score=30.76 Aligned_cols=42 Identities=17% Similarity=0.120 Sum_probs=33.3
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHH-HHHHHHcCCCEEEEc
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTRED-AIKAVEVGVAGIIVS 244 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eD-A~~a~~~G~dgI~VS 244 (263)
+...-++.||+.++.|+.+-= |.+|+. .+.+.++|+|+|.|-
T Consensus 44 ~G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh 87 (231)
T 3ctl_A 44 LSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLH 87 (231)
T ss_dssp BCHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEEC
T ss_pred hcHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEEC
Confidence 345789999999888877765 567776 778889999999874
No 370
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=71.13 E-value=3.4 Score=37.70 Aligned_cols=47 Identities=9% Similarity=-0.002 Sum_probs=37.7
Q ss_pred CCC-HHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE--cCCCC
Q 039466 202 SLS-WKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV--SNHGA 248 (263)
Q Consensus 202 ~~~-W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V--SNHGG 248 (263)
.-+ |+.+++|++.+++||..=+ +.+++|++.+++.| +|.|.+ +.-||
T Consensus 236 ~~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GG 287 (392)
T 3ddm_A 236 ADRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPDLAKWGG 287 (392)
T ss_dssp TTSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCCTTTTTH
T ss_pred ccchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcchhCC
Confidence 346 8999999999999999988 78999999999876 666543 34444
No 371
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=71.05 E-value=3.3 Score=37.75 Aligned_cols=42 Identities=14% Similarity=0.022 Sum_probs=36.1
Q ss_pred CCCHHHHHHHH-hhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLR-SITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr-~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|+ +.+++||+.=| +.+++|++.+++.| +|.|.+
T Consensus 232 ~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~i 276 (389)
T 3ozy_A 232 IDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQA 276 (389)
T ss_dssp TTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred cccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEe
Confidence 34799999999 99999999999 78999999999875 777643
No 372
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=70.70 E-value=7 Score=34.53 Aligned_cols=22 Identities=18% Similarity=0.066 Sum_probs=17.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEE
Q 039466 128 KRDMAATLVQRAERNGFMALVL 149 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~v 149 (263)
|.+..++++++..+.|++.|++
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v 52 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVP 52 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECT
T ss_pred CHHHHHHHHHHHHHcCCCEEEE
Confidence 5667888888888899888763
No 373
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=70.69 E-value=56 Score=28.86 Aligned_cols=79 Identities=23% Similarity=0.152 Sum_probs=45.2
Q ss_pred cceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc-------cc-cCHHHH
Q 039466 73 ASIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA-------AY-KKRDMA 132 (263)
Q Consensus 73 ~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~-------~~-~d~~~~ 132 (263)
.|.++.|+.-.+-.+.++-..+++-.-+.|+- +++||.+ +.|.|| +.+...+ +- .+-..+
T Consensus 39 ~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~ea 118 (332)
T 2r8w_A 39 SAFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEA 118 (332)
T ss_dssp EECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHH
T ss_pred eEEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHH
Confidence 34455665433333344444666665566663 4456544 345554 2223222 11 255667
Q ss_pred HHHHHHHHHcCCCEEEEcc
Q 039466 133 ATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 133 ~~li~ra~~aG~~al~vTv 151 (263)
.++.+.|+++|++++++..
T Consensus 119 i~la~~A~~~Gadavlv~~ 137 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLAP 137 (332)
T ss_dssp HHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 8889999999999998864
No 374
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=70.68 E-value=22 Score=30.74 Aligned_cols=25 Identities=16% Similarity=0.088 Sum_probs=20.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccC
Q 039466 128 KRDMAATLVQRAERNGFMALVLTAD 152 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD 152 (263)
|.+..++++++..+.|++.|++.--
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~Gt 43 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVAVGT 43 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESST
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcc
Confidence 6677889999988999999886443
No 375
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=70.63 E-value=5.1 Score=37.14 Aligned_cols=41 Identities=10% Similarity=0.116 Sum_probs=35.8
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
.-+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|.
T Consensus 240 ~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~ 282 (433)
T 3rcy_A 240 PDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQ 282 (433)
T ss_dssp TTCHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred hhhHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEE
Confidence 3478999999999999999998 78999999999976 77663
No 376
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=70.48 E-value=6.7 Score=34.40 Aligned_cols=39 Identities=21% Similarity=0.295 Sum_probs=32.7
Q ss_pred HHHHHHhhcC--CCEEEEecCCHHHHHHHHHcCCCEEEEcCC
Q 039466 207 DIEWLRSITN--LPILIKGVLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 207 dl~~lr~~~~--lPiilKGI~s~eDA~~a~~~G~dgI~VSNH 246 (263)
.++..|+..+ .+|.+ .+.+.+++++|.+.|+|.|.+.|-
T Consensus 185 av~~ar~~~~~~~~IgV-ev~t~eea~eA~~aGaD~I~ld~~ 225 (286)
T 1x1o_A 185 AVRRAKARAPHYLKVEV-EVRSLEELEEALEAGADLILLDNF 225 (286)
T ss_dssp HHHHHHHHSCTTSCEEE-EESSHHHHHHHHHHTCSEEEEESC
T ss_pred HHHHHHHhCCCCCEEEE-EeCCHHHHHHHHHcCCCEEEECCC
Confidence 5788888765 35555 889999999999999999999884
No 377
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=70.33 E-value=24 Score=30.59 Aligned_cols=74 Identities=19% Similarity=0.270 Sum_probs=47.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..+++++...+.|++.|++.--+-- ...+++++
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~GttGE--------------------------------------------~~~Ls~~E 57 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGTTGE--------------------------------------------GCSVGSRE 57 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTT--------------------------------------------GGGSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccC--------------------------------------------hhhCCHHH
Confidence 6677889999988999999886443311 02344433
Q ss_pred ----HHHHHhhc--CCCEEEEecC--C----HHHHHHHHHcCCCEEEEcCC
Q 039466 208 ----IEWLRSIT--NLPILIKGVL--T----REDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 208 ----l~~lr~~~--~lPiilKGI~--s----~eDA~~a~~~G~dgI~VSNH 246 (263)
++..++.. ++||| =|+. + .+-++.|.++|+||++|..-
T Consensus 58 r~~v~~~~~~~~~gr~pvi-aGvg~~~t~~ai~la~~A~~~Gadavlv~~P 107 (294)
T 3b4u_A 58 RQAILSSFIAAGIAPSRIV-TGVLVDSIEDAADQSAEALNAGARNILLAPP 107 (294)
T ss_dssp HHHHHHHHHHTTCCGGGEE-EEECCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHHhCCCCcEE-EeCCCccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 34444544 36877 4773 3 44455667799999998654
No 378
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=69.99 E-value=4.5 Score=36.88 Aligned_cols=42 Identities=19% Similarity=0.133 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|++.+++||+.=+ +.+++|++++++.| +|.|.+
T Consensus 255 ~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 298 (410)
T 2gl5_A 255 PLNSDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQSIAVAQP 298 (410)
T ss_dssp SSCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHHHTTCCSEECC
T ss_pred hhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 3479999999999999999998 78999999999976 777754
No 379
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=69.81 E-value=6 Score=36.23 Aligned_cols=42 Identities=19% Similarity=0.174 Sum_probs=36.3
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
..+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|.+
T Consensus 248 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 291 (409)
T 3go2_A 248 SYSPQGLAYVRNHSPHPISSCETLFGIREFKPFFDANAVDVAIV 291 (409)
T ss_dssp CSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEEEE
T ss_pred cCCHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 3488999999999999999988 78999999999976 777654
No 380
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=69.70 E-value=4.7 Score=36.83 Aligned_cols=41 Identities=10% Similarity=-0.005 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
.-+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|.
T Consensus 238 ~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ 280 (401)
T 3sbf_A 238 PNQTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIANRRIDFIR 280 (401)
T ss_dssp TTCGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred hhHHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHhcCCCCEEe
Confidence 3478999999999999999988 78999999999976 67663
No 381
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=69.60 E-value=56 Score=28.37 Aligned_cols=80 Identities=8% Similarity=0.003 Sum_probs=46.8
Q ss_pred cceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc-------c-ccCHHHH
Q 039466 73 ASIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA-------A-YKKRDMA 132 (263)
Q Consensus 73 ~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~-------~-~~d~~~~ 132 (263)
.|.++.|+.-.+-.+.++-..+++---+.|+- ++.||.+ +.|.|| +.+...+ + -.+-..+
T Consensus 9 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~a 88 (300)
T 3eb2_A 9 FPYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADA 88 (300)
T ss_dssp EEBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHH
T ss_pred EEEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHH
Confidence 35556666543333444444666666666763 3344433 345555 2233222 1 2355678
Q ss_pred HHHHHHHHHcCCCEEEEccC
Q 039466 133 ATLVQRAERNGFMALVLTAD 152 (263)
Q Consensus 133 ~~li~ra~~aG~~al~vTvD 152 (263)
.++.+.|+++|++++++..=
T Consensus 89 i~la~~a~~~Gadavlv~~P 108 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAILE 108 (300)
T ss_dssp HHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCC
Confidence 89999999999999988654
No 382
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=69.45 E-value=48 Score=28.68 Aligned_cols=24 Identities=17% Similarity=0.120 Sum_probs=19.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcc
Q 039466 128 KRDMAATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTv 151 (263)
+-..+.++.+.|+++|++++++..
T Consensus 76 ~t~~ai~la~~A~~~Gadavlv~~ 99 (293)
T 1w3i_A 76 NLDDAIRLAKLSKDFDIVGIASYA 99 (293)
T ss_dssp CHHHHHHHHHHGGGSCCSEEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcC
Confidence 445677888999999999998874
No 383
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=69.41 E-value=13 Score=30.84 Aligned_cols=76 Identities=16% Similarity=0.048 Sum_probs=48.1
Q ss_pred cCHHHHHHHHHHHHHcCCCEEEEcc-CCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCH
Q 039466 127 KKRDMAATLVQRAERNGFMALVLTA-DTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSW 205 (263)
Q Consensus 127 ~d~~~~~~li~ra~~aG~~al~vTv-D~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 205 (263)
.|.....+.+++++++|++.+-+.+ |-+. .| .-.+..
T Consensus 16 ~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~f-------------v~-----------------------------~~~~~~ 53 (228)
T 1h1y_A 16 SDFANLAAEADRMVRLGADWLHMDIMDGHF-------------VP-----------------------------NLTIGA 53 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSS-------------SS-----------------------------CBCBCH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEEecCCc-------------Cc-----------------------------chhhCH
Confidence 4555567778899999988875543 2111 00 012345
Q ss_pred HHHHHHHhhcCCCEE--EEecCCHHHHHHHHHcCCCEEEEc
Q 039466 206 KDIEWLRSITNLPIL--IKGVLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 206 ~dl~~lr~~~~lPii--lKGI~s~eDA~~a~~~G~dgI~VS 244 (263)
+.++.||+.++.|+. ++---..+.+..+.++|+|+|.|-
T Consensus 54 ~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~agad~v~vH 94 (228)
T 1h1y_A 54 PVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFH 94 (228)
T ss_dssp HHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEEEEE
T ss_pred HHHHHHHhhcCCcEEEEEEecCHHHHHHHHHHcCCCEEEEC
Confidence 778889988877766 332222224778888999998773
No 384
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=69.26 E-value=4.1 Score=37.05 Aligned_cols=41 Identities=12% Similarity=0.115 Sum_probs=35.8
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
..+|+.+++|++.+++||+.=+ +.++++++++++.| +|.|.
T Consensus 246 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ 288 (403)
T 2ox4_A 246 PLNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSIDVIQ 288 (403)
T ss_dssp TTSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTCCSEEC
T ss_pred hhhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEe
Confidence 3479999999999999999988 78999999999976 77764
No 385
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=68.90 E-value=34 Score=29.86 Aligned_cols=74 Identities=20% Similarity=0.261 Sum_probs=47.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..++++++..+.|++.|++.--+-- ...+++++
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~GttGE--------------------------------------------~~~Ls~~E 70 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAGTTGE--------------------------------------------SPTTTAAE 70 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTT--------------------------------------------TTTSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccC--------------------------------------------hhhCCHHH
Confidence 6677889999998999999886443311 02344432
Q ss_pred ----HHHHHhhc--CCCEEEEecC--C----HHHHHHHHHcCCCEEEEcCC
Q 039466 208 ----IEWLRSIT--NLPILIKGVL--T----REDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 208 ----l~~lr~~~--~lPiilKGI~--s----~eDA~~a~~~G~dgI~VSNH 246 (263)
++..++.. ++||| =||. + .+-++.|.+.|+||++|..-
T Consensus 71 r~~v~~~~~~~~~grvpvi-aGvg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 71 KLELLKAVREEVGDRAKLI-AGVGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp HHHHHHHHHHHHTTTSEEE-EECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHhCCCCcEE-ecCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 34444443 47866 4773 3 44455677899999998653
No 386
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=68.76 E-value=18 Score=33.24 Aligned_cols=41 Identities=10% Similarity=0.225 Sum_probs=30.0
Q ss_pred HHHHHHHhhc------CCCEEEE-----------ecCCHHH----HHHHHH-cCCCEEEEcCCC
Q 039466 206 KDIEWLRSIT------NLPILIK-----------GVLTRED----AIKAVE-VGVAGIIVSNHG 247 (263)
Q Consensus 206 ~dl~~lr~~~------~lPiilK-----------GI~s~eD----A~~a~~-~G~dgI~VSNHG 247 (263)
+-++.+|+.+ +.||.+| |+ +.+| |+.+.+ .|+|.|.||+-+
T Consensus 226 evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~-~~ed~~~la~~L~~~~Gvd~I~vs~g~ 288 (419)
T 3l5a_A 226 EVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGY-TIDEFNQLIDWVMDVSNIQYLAIASWG 288 (419)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEE-CHHHHHHHHHHHHHHSCCCCEEECCTT
T ss_pred HHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCC-CHHHHHHHHHHHHhhcCCcEEEEeeCC
Confidence 5678888877 5789888 43 4455 445557 899999999854
No 387
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=68.69 E-value=2.7 Score=36.11 Aligned_cols=42 Identities=10% Similarity=0.140 Sum_probs=34.7
Q ss_pred CCHHHHHHHHhhc-----CCCEEEEecCCHHHHHHHHHcCCCEEEEc
Q 039466 203 LSWKDIEWLRSIT-----NLPILIKGVLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 203 ~~W~dl~~lr~~~-----~lPiilKGI~s~eDA~~a~~~G~dgI~VS 244 (263)
-+++.|+++|+.. +.+|.+=|=.+++.+.+++++|||.+|+.
T Consensus 177 ~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~G 223 (246)
T 3inp_A 177 AMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAG 223 (246)
T ss_dssp THHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEES
T ss_pred HHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEEe
Confidence 3578888888753 48898888666899999999999999875
No 388
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=68.67 E-value=15 Score=29.63 Aligned_cols=32 Identities=13% Similarity=0.203 Sum_probs=23.5
Q ss_pred HHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEEc
Q 039466 208 IEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 208 l~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~VS 244 (263)
+..+.+..+.||++. +++..+.++|+|+|.+.
T Consensus 62 l~~~~~~~~v~v~v~-----~~~~~a~~~gad~v~l~ 93 (215)
T 1xi3_A 62 LRQLTREYDALFFVD-----DRVDVALAVDADGVQLG 93 (215)
T ss_dssp HHHHHHHTTCEEEEE-----SCHHHHHHHTCSEEEEC
T ss_pred HHHHHHHcCCeEEEc-----ChHHHHHHcCCCEEEEC
Confidence 333444567899986 56678889999999774
No 389
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=68.59 E-value=24 Score=30.21 Aligned_cols=22 Identities=14% Similarity=0.295 Sum_probs=16.1
Q ss_pred HHHHHHHHcCCCEEEEccCCCC
Q 039466 134 TLVQRAERNGFMALVLTADTPR 155 (263)
Q Consensus 134 ~li~ra~~aG~~al~vTvD~~~ 155 (263)
+.++.+..+|++.+++.....+
T Consensus 30 ~~~e~a~~~GaD~v~lDlE~~~ 51 (267)
T 2vws_A 30 YMAEIAATSGYDWLLIDGEHAP 51 (267)
T ss_dssp HHHHHHHTTCCSEEEEETTTSC
T ss_pred HHHHHHHhCCCCEEEEcCCCCC
Confidence 4466777899999998875443
No 390
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=68.53 E-value=24 Score=30.56 Aligned_cols=25 Identities=16% Similarity=0.230 Sum_probs=19.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccC
Q 039466 128 KRDMAATLVQRAERNGFMALVLTAD 152 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD 152 (263)
|.+..++++++..+.|++.|++.--
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~Gt 43 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVCGT 43 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEESST
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcc
Confidence 6677888899988899999886443
No 391
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=68.52 E-value=7.2 Score=35.36 Aligned_cols=41 Identities=27% Similarity=0.508 Sum_probs=35.4
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
.-+|+.+++|++.+++||..=+ +.+++|++.+++.| +|.|.
T Consensus 229 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~ 271 (385)
T 3i6e_A 229 AHHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVS 271 (385)
T ss_dssp TTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEE
T ss_pred cccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEE
Confidence 3479999999999999999988 78999999999865 67664
No 392
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=68.46 E-value=22 Score=31.05 Aligned_cols=23 Identities=26% Similarity=0.291 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEc
Q 039466 128 KRDMAATLVQRAERNGFMALVLT 150 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vT 150 (263)
|.+..++++++..+.|++.|++.
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~ 53 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVL 53 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEES
T ss_pred CHHHHHHHHHHHHHcCCCEEEeC
Confidence 66778899999888999988854
No 393
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=68.31 E-value=23 Score=30.76 Aligned_cols=19 Identities=16% Similarity=0.239 Sum_probs=14.3
Q ss_pred HHHHHHHcCCCEEEEccCC
Q 039466 135 LVQRAERNGFMALVLTADT 153 (263)
Q Consensus 135 li~ra~~aG~~al~vTvD~ 153 (263)
.++.+..+|++.+++....
T Consensus 52 ~~e~a~~~GaD~v~lDlEh 70 (287)
T 2v5j_A 52 SAELLAGAGFDWLLIDGEH 70 (287)
T ss_dssp HHHHHHTSCCSEEEEESSS
T ss_pred HHHHHHhCCCCEEEEeCCC
Confidence 4566778999998887753
No 394
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=68.23 E-value=7.3 Score=35.29 Aligned_cols=47 Identities=17% Similarity=0.254 Sum_probs=38.3
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE--cCCCC
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV--SNHGA 248 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V--SNHGG 248 (263)
.-+|+.+++|++.+++||..=+ +.+.+|++.+++.| +|.|.+ +.-||
T Consensus 231 ~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GG 281 (382)
T 3dgb_A 231 RNNRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGG 281 (382)
T ss_dssp TTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTS
T ss_pred ccCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecccccCC
Confidence 3479999999999999999988 78999999999864 777754 34444
No 395
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=68.22 E-value=6.2 Score=35.92 Aligned_cols=39 Identities=15% Similarity=0.230 Sum_probs=34.8
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEE
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGI 241 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI 241 (263)
-+|+.+++|++.+++||..=+ +.+++|++.+++.| +|.|
T Consensus 257 ~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v 297 (390)
T 3ugv_A 257 DNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGACDLV 297 (390)
T ss_dssp TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred ccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 378999999999999999998 78999999999976 6665
No 396
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=68.21 E-value=8.2 Score=34.98 Aligned_cols=42 Identities=17% Similarity=0.301 Sum_probs=35.8
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|++.+++||..=+ +.+.+|++.+++.| +|.|.+
T Consensus 225 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 268 (379)
T 3r0u_A 225 YYDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNMINI 268 (379)
T ss_dssp TTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEE
T ss_pred cccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEE
Confidence 3478999999999999999988 78999999999976 676543
No 397
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=68.09 E-value=5.6 Score=33.48 Aligned_cols=36 Identities=19% Similarity=0.137 Sum_probs=31.4
Q ss_pred HHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEE
Q 039466 206 KDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGI 241 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI 241 (263)
..+..+.+..++.+|+.||-+.++...+.+.||+.+
T Consensus 199 ~~i~~~a~~~g~~viaeGVEt~~~~~~l~~lG~~~~ 234 (259)
T 3s83_A 199 RSVVKLGQDLDLEVVAEGVENAEMAHALQSLGCDYG 234 (259)
T ss_dssp HHHHHHHHHTTCEEEECCCCSHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHCCCeEEEEeCCCHHHHHHHHhcCCCEe
Confidence 345566677899999999999999999999999976
No 398
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=67.90 E-value=19 Score=32.44 Aligned_cols=45 Identities=13% Similarity=0.159 Sum_probs=37.5
Q ss_pred CCCCCHHHHHHHHhhc-----------CCCEEEEec--CCHHHHHHHHHcCCCEEEEc
Q 039466 200 DPSLSWKDIEWLRSIT-----------NLPILIKGV--LTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 200 ~~~~~W~dl~~lr~~~-----------~lPiilKGI--~s~eDA~~a~~~G~dgI~VS 244 (263)
.+.++++-|+.|++.+ ++|+|+=|- .+.|+.++|+++|+.=|=|.
T Consensus 219 ~p~L~~~~L~~I~~~v~~~~~~~~~~~~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~ 276 (349)
T 3elf_A 219 NVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSLKSEIEEALRYGVVKMNVD 276 (349)
T ss_dssp SSCCCTHHHHHHHHHHHHHHTCCTTCCCCCEEECCCTTCCHHHHHHHHHTTEEEEEEC
T ss_pred CCccCHHHHHHHHHHHHhhcCCccccCCCcEEEeCCCCCCHHHHHHHHHcCCEEEEcc
Confidence 3678899999998876 689999996 78899999999998766543
No 399
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=67.88 E-value=8.7 Score=33.78 Aligned_cols=38 Identities=11% Similarity=0.185 Sum_probs=31.4
Q ss_pred HHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 207 DIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 207 dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
.++.+|+.- ..||.+ +|-|.|++++|+++|+|.|.+-|
T Consensus 188 Av~~ar~~~~~~~IeV-Ev~tl~ea~eAl~aGaD~I~LDn 226 (287)
T 3tqv_A 188 AVTKAKKLDSNKVVEV-EVTNLDELNQAIAAKADIVMLDN 226 (287)
T ss_dssp HHHHHHHHCTTSCEEE-EESSHHHHHHHHHTTCSEEEEES
T ss_pred HHHHHHhhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEEcC
Confidence 466666653 368887 89999999999999999999877
No 400
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=67.46 E-value=8.5 Score=33.74 Aligned_cols=38 Identities=32% Similarity=0.432 Sum_probs=32.5
Q ss_pred HHHHHHhhcC--CCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 207 DIEWLRSITN--LPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 207 dl~~lr~~~~--lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
.++..|+..+ .+|.+ .|.+.|+++.|++.|+|.|++-|
T Consensus 182 av~~ar~~~~~~~~I~V-EV~tleea~eA~~aGaD~I~LDn 221 (285)
T 1o4u_A 182 AVQEVRKIIPFTTKIEV-EVENLEDALRAVEAGADIVMLDN 221 (285)
T ss_dssp HHHHHHTTSCTTSCEEE-EESSHHHHHHHHHTTCSEEEEES
T ss_pred HHHHHHHhCCCCceEEE-EeCCHHHHHHHHHcCCCEEEECC
Confidence 5778888764 46777 69999999999999999999988
No 401
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=67.45 E-value=5.1 Score=36.45 Aligned_cols=42 Identities=17% Similarity=0.135 Sum_probs=36.4
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
..+|+.+++|++.+++||+.=+ +.+++|++++++.| +|.|.+
T Consensus 252 ~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 295 (407)
T 2o56_A 252 PLNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLSVIQP 295 (407)
T ss_dssp SSSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred hhhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 3479999999999999999988 78999999999976 777754
No 402
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=67.43 E-value=6.6 Score=36.12 Aligned_cols=39 Identities=10% Similarity=0.009 Sum_probs=34.8
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEE
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGI 241 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI 241 (263)
-+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|
T Consensus 268 ~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v 308 (412)
T 3stp_A 268 DDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVL 308 (412)
T ss_dssp TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred ccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEE
Confidence 378999999999999999988 79999999999976 6766
No 403
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=67.29 E-value=16 Score=32.07 Aligned_cols=46 Identities=20% Similarity=0.333 Sum_probs=27.5
Q ss_pred CCCCHHHHHHH-HhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcCCC
Q 039466 201 PSLSWKDIEWL-RSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSNHG 247 (263)
Q Consensus 201 ~~~~W~dl~~l-r~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSNHG 247 (263)
..++++++.++ +..-.+=+.-=- +.++++|+.+.++|+|.|++ +-|
T Consensus 145 ~gm~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA~agpDiI~~-h~g 192 (286)
T 2p10_A 145 TGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAKAGADILVC-HMG 192 (286)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEECCEECSHHHHHHHHHHTCSEEEE-ECS
T ss_pred cCCCHHHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHcCCCEEEE-CCC
Confidence 44677664443 332222111111 68999999999999996654 444
No 404
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=67.03 E-value=7.6 Score=34.08 Aligned_cols=51 Identities=27% Similarity=0.348 Sum_probs=40.3
Q ss_pred CCCHHHHHHHHhhc--CCCEEEEecCCHHHHHHHHHcCCCEEEEcC--CCCCCCC
Q 039466 202 SLSWKDIEWLRSIT--NLPILIKGVLTREDAIKAVEVGVAGIIVSN--HGARQLD 252 (263)
Q Consensus 202 ~~~W~dl~~lr~~~--~lPiilKGI~s~eDA~~a~~~G~dgI~VSN--HGGRqlD 252 (263)
+++-+.+++.++.. +.|+++-|=.+++.+....+.|||+|.||. |..+-+|
T Consensus 224 ~~~~~~~k~av~~v~~~ipi~AsGGIt~eni~~~a~tGvD~IsVgs~~~~a~~~D 278 (286)
T 1x1o_A 224 NFPLEALREAVRRVGGRVPLEASGNMTLERAKAAAEAGVDYVSVGALTHSAKALD 278 (286)
T ss_dssp SCCHHHHHHHHHHHTTSSCEEEESSCCHHHHHHHHHHTCSEEECTHHHHSCCCCC
T ss_pred CCCHHHHHHHHHHhCCCCeEEEEcCCCHHHHHHHHHcCCCEEEEcHHHcCCCcee
Confidence 34556676666654 689999997789999999999999999976 5555555
No 405
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=66.67 E-value=22 Score=30.84 Aligned_cols=23 Identities=4% Similarity=-0.012 Sum_probs=19.1
Q ss_pred CHHHHHHHHHHHHH-cCCCEEEEc
Q 039466 128 KRDMAATLVQRAER-NGFMALVLT 150 (263)
Q Consensus 128 d~~~~~~li~ra~~-aG~~al~vT 150 (263)
|.+..++++++..+ .|++.|++.
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~ 45 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVG 45 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEES
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeC
Confidence 66778899999888 999998864
No 406
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=66.66 E-value=6.6 Score=35.81 Aligned_cols=42 Identities=21% Similarity=0.141 Sum_probs=36.3
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|++.+++||+.=+ +.++++++++++.| +|.|.+
T Consensus 247 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 290 (410)
T 2qq6_A 247 PENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDYVMP 290 (410)
T ss_dssp TTCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred hhhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 3479999999999999999988 78999999999976 777744
No 407
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=66.63 E-value=31 Score=29.92 Aligned_cols=103 Identities=15% Similarity=0.093 Sum_probs=65.6
Q ss_pred HHHHHHHHCCCceeecC--CCCccHHHHHHhccccccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhh
Q 039466 93 ATARAAASCNTIMVLSF--TSSCSIEEVAASCNAAYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQ 170 (263)
Q Consensus 93 a~AraA~~~gi~~~lss--~s~~sieeV~~~~~~~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p 170 (263)
..++.|++.|....+.. ..+++. . -..|++...++++++.++|++.+.+- |+.. ...|
T Consensus 125 ~~i~~a~~~G~~v~~~l~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~Ga~~i~l~-DT~G-----------~~~P 184 (298)
T 2cw6_A 125 AILKAAQSANISVRGYVSCALGCPY-----E---GKISPAKVAEVTKKFYSMGCYEISLG-DTIG-----------VGTP 184 (298)
T ss_dssp HHHHHHHHTTCEEEEEEETTTCBTT-----T---BSCCHHHHHHHHHHHHHTTCSEEEEE-ETTS-----------CCCH
T ss_pred HHHHHHHHCCCeEEEEEEEEeeCCc-----C---CCCCHHHHHHHHHHHHHcCCCEEEec-CCCC-----------CcCH
Confidence 56778888888664321 122211 0 13477888899999999999887765 5421 1111
Q ss_pred hhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcC-CCEEEEec----CCHHHHHHHHHcCCCEEEEcC
Q 039466 171 QLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITN-LPILIKGV----LTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~-lPiilKGI----~s~eDA~~a~~~G~dgI~VSN 245 (263)
.-.-+-++++++.++ +||-+=+= +...-+..|+++|++-|..|-
T Consensus 185 -------------------------------~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~tv 233 (298)
T 2cw6_A 185 -------------------------------GIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSV 233 (298)
T ss_dssp -------------------------------HHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBT
T ss_pred -------------------------------HHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEeec
Confidence 001245788888884 67755542 456678999999999998654
Q ss_pred C
Q 039466 246 H 246 (263)
Q Consensus 246 H 246 (263)
-
T Consensus 234 ~ 234 (298)
T 2cw6_A 234 A 234 (298)
T ss_dssp T
T ss_pred c
Confidence 3
No 408
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=66.55 E-value=9.3 Score=34.88 Aligned_cols=41 Identities=15% Similarity=0.121 Sum_probs=35.3
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
-+|+.+++|++.+++||..=+ +.+++|++.+++.| +|.|.+
T Consensus 242 ~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~ 284 (400)
T 3mwc_A 242 EALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNI 284 (400)
T ss_dssp TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEE
Confidence 378999999999999999988 78999999999976 676643
No 409
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=66.47 E-value=8.2 Score=34.11 Aligned_cols=22 Identities=23% Similarity=0.190 Sum_probs=16.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEE
Q 039466 128 KRDMAATLVQRAERNGFMALVL 149 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~v 149 (263)
|.+..++++++..+.|++.|++
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v 52 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVP 52 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECT
T ss_pred CHHHHHHHHHHHHHcCCCEEEe
Confidence 4466788888888889888774
No 410
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=66.41 E-value=5.3 Score=36.52 Aligned_cols=41 Identities=15% Similarity=0.198 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
.-+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|.
T Consensus 245 ~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ 287 (404)
T 4e5t_A 245 PEKPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQ 287 (404)
T ss_dssp TTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEEC
T ss_pred cccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEe
Confidence 3478999999999999999998 78999999999976 67653
No 411
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=66.24 E-value=6.3 Score=38.06 Aligned_cols=42 Identities=17% Similarity=0.291 Sum_probs=36.7
Q ss_pred CHHHHHHHHhhcCCCEEEE------e---cCCHHHHHHHHH-cCCCEEEEcC
Q 039466 204 SWKDIEWLRSITNLPILIK------G---VLTREDAIKAVE-VGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilK------G---I~s~eDA~~a~~-~G~dgI~VSN 245 (263)
-|+-|+.+.+.|++|+++. | |.||+||..+.. .|.|++++.|
T Consensus 516 ~~~ll~~f~~~TG~pvllNTSfN~~GePiV~tp~dA~~~f~~~~lD~Lv~~~ 567 (576)
T 3ven_A 516 YHRMLTELGDLVGDPVCLNTSFNDRGEPIVSSPADALLTFSRLPIDALAVGP 567 (576)
T ss_dssp HHHHHHHHHHHHSSCEEEEEESSCTTSCCCCSHHHHHHHHHHTTCSEEEETT
T ss_pred HHHHHHHHHHHhCCeEEEECCCCCCCCCCCCCHHHHHHHHHhCCCCEEEECC
Confidence 3567999999999999984 5 589999999996 8999999866
No 412
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=66.08 E-value=5.8 Score=36.36 Aligned_cols=41 Identities=24% Similarity=0.274 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
.-+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|.
T Consensus 215 ~~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~ 257 (405)
T 3rr1_A 215 AEQAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQ 257 (405)
T ss_dssp CSSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEEC
T ss_pred cccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEE
Confidence 3478999999999999999998 78999999999875 77664
No 413
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=65.99 E-value=20 Score=32.01 Aligned_cols=26 Identities=15% Similarity=0.216 Sum_probs=20.5
Q ss_pred cCHHHHHHHHHHHHHcCCCEEEEccC
Q 039466 127 KKRDMAATLVQRAERNGFMALVLTAD 152 (263)
Q Consensus 127 ~d~~~~~~li~ra~~aG~~al~vTvD 152 (263)
-|.+..++++++..+.|++.|++.--
T Consensus 49 ID~~~l~~lv~~li~~Gv~Gl~v~Gt 74 (343)
T 2v9d_A 49 LDKPGTAALIDDLIKAGVDGLFFLGS 74 (343)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESST
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCcc
Confidence 36677889999988999999886443
No 414
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=65.92 E-value=29 Score=30.07 Aligned_cols=71 Identities=15% Similarity=0.223 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHH
Q 039466 128 KRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKD 207 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~d 207 (263)
|.+..++++++..+.|++.|++.--+--. ..+++++
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~--------------------------------------------~~Ls~~E 55 (291)
T 3a5f_A 20 DFDKLSELIEWHIKSKTDAIIVCGTTGEA--------------------------------------------TTMTETE 55 (291)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTG--------------------------------------------GGSCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh--------------------------------------------hhCCHHH
Q ss_pred HHHHHhhc------CCCEEEEecCC------HHHHHHHHHcCCCEEEE
Q 039466 208 IEWLRSIT------NLPILIKGVLT------REDAIKAVEVGVAGIIV 243 (263)
Q Consensus 208 l~~lr~~~------~lPiilKGI~s------~eDA~~a~~~G~dgI~V 243 (263)
-+.+.+.+ ++||| =||.+ .+-++.|.++|+||++|
T Consensus 56 r~~v~~~~~~~~~gr~pvi-~Gvg~~~t~~ai~la~~a~~~Gadavlv 102 (291)
T 3a5f_A 56 RKETIKFVIDKVNKRIPVI-AGTGSNNTAASIAMSKWAESIGVDGLLV 102 (291)
T ss_dssp HHHHHHHHHHHHTTSSCEE-EECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHhCCCCcEE-EeCCcccHHHHHHHHHHHHhcCCCEEEE
No 415
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=65.87 E-value=56 Score=29.41 Aligned_cols=99 Identities=15% Similarity=0.027 Sum_probs=63.4
Q ss_pred HHHHHHHHHCCCceeecCCCCccHHHHHHhccccccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhh
Q 039466 92 VATARAAASCNTIMVLSFTSSCSIEEVAASCNAAYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQ 171 (263)
Q Consensus 92 ~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~ 171 (263)
..+-+.+++.|-|++||+..+ +++||..+. +-..+.|.+-++++.-+. |+.|
T Consensus 125 ~pLL~~va~~gKPviLstGms-tl~Ei~~Av--------------e~i~~~g~~viLlhC~s~------------YPt~- 176 (350)
T 3g8r_A 125 WPLLERIARSDKPVVASTAGA-RREDIDKVV--------------SFMLHRGKDLTIMHCVAE------------YPTP- 176 (350)
T ss_dssp HHHHHHHHTSCSCEEEECTTC-CHHHHHHHH--------------HHHHTTTCCEEEEECCCC------------SSCC-
T ss_pred HHHHHHHHhhCCcEEEECCCC-CHHHHHHHH--------------HHHHHcCCCEEEEecCCC------------CCCC-
Confidence 368888999999999999986 899986553 222345665444433221 2111
Q ss_pred hhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhc-CCCEEEEe-cC--CHHHHHHHHHcCCCEEEEcCC
Q 039466 172 LKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSIT-NLPILIKG-VL--TREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~-~lPiilKG-I~--s~eDA~~a~~~G~dgI~VSNH 246 (263)
...++...|..|++.+ ++||..-+ -. ...-+..|+.+||+-|=+-..
T Consensus 177 ----------------------------~~~~nL~aI~~Lk~~fp~lpVG~SdHt~g~~~~~~~AAvAlGA~vIEkH~t 227 (350)
T 3g8r_A 177 ----------------------------DDHLHLARIKTLRQQYAGVRIGYSTHEDPDLMEPIMLAVAQGATVFEKHVG 227 (350)
T ss_dssp ----------------------------GGGCCTTHHHHHHHHCTTSEEEEEECCCSSCCHHHHHHHHTTCCEEEEEBC
T ss_pred ----------------------------cccCCHHHHHHHHHHCCCCCEEcCCCCCCCccHHHHHHHHcCCCEEEEecC
Confidence 1234567788899999 79986553 11 123456888999986655433
No 416
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=65.77 E-value=11 Score=33.43 Aligned_cols=45 Identities=20% Similarity=0.172 Sum_probs=32.4
Q ss_pred CHHHHHHHHhhcCCCEEEEec---CCH-HHHHHHHHcCCCEEEEcCCCC
Q 039466 204 SWKDIEWLRSITNLPILIKGV---LTR-EDAIKAVEVGVAGIIVSNHGA 248 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKGI---~s~-eDA~~a~~~G~dgI~VSNHGG 248 (263)
+-+.++.+.+.+++|++++=+ .++ -+...+.++|++-|.+.||.=
T Consensus 199 ~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ 247 (305)
T 3ih1_A 199 SEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTSL 247 (305)
T ss_dssp SHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHHH
T ss_pred CHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHHH
Confidence 557889999999999987632 111 135566789999999988753
No 417
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=65.59 E-value=4.4 Score=36.57 Aligned_cols=45 Identities=13% Similarity=0.261 Sum_probs=37.7
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE--EcCCCC
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII--VSNHGA 248 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~--VSNHGG 248 (263)
+|+.+++|++.+++||..=+ +.+++|++.+++.| +|.|. ++..||
T Consensus 223 ~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GG 271 (368)
T 3q45_A 223 LYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAG 271 (368)
T ss_dssp GGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTS
T ss_pred HHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcCC
Confidence 67889999999999999988 79999999999965 67664 456666
No 418
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=65.51 E-value=1.9 Score=38.10 Aligned_cols=51 Identities=10% Similarity=0.102 Sum_probs=25.1
Q ss_pred CCHHHHHHHHhhcC--------CCEEEEecCCHHHHHHHHHcCCCEEEEcC--CCCCCCCC
Q 039466 203 LSWKDIEWLRSITN--------LPILIKGVLTREDAIKAVEVGVAGIIVSN--HGARQLDY 253 (263)
Q Consensus 203 ~~W~dl~~lr~~~~--------lPiilKGI~s~eDA~~a~~~G~dgI~VSN--HGGRqlD~ 253 (263)
++-++++.+++..+ +||.+-|=.+.+.+...++.|||+|.||. |+...+|.
T Consensus 228 ~~~~~l~~~v~~l~~~~~g~~~v~I~ASGGIt~~ni~~~~~~GvD~i~vGs~i~~a~~~D~ 288 (294)
T 3c2e_A 228 FKGDGLKMCAQSLKNKWNGKKHFLLECSGGLNLDNLEEYLCDDIDIYSTSSIHQGTPVIDF 288 (294)
T ss_dssp ---------------------CCEEEEECCCCC------CCCSCSEEECGGGTSSCCCCCE
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEECCCCHHHHHHHHHcCCCEEEEechhcCCCCCce
Confidence 34456666555442 78888883499999999999999999987 66666664
No 419
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=65.38 E-value=59 Score=27.08 Aligned_cols=44 Identities=20% Similarity=0.348 Sum_probs=35.0
Q ss_pred CCCCHHHHHHHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 201 PSLSWKDIEWLRSIT--NLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~--~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
+..+-++++.+++.. ++||.+-| |-+.+||...+++|++=|=+|
T Consensus 159 ~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aGa~RiG~S 205 (220)
T 1ub3_A 159 RGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAGASRLGTS 205 (220)
T ss_dssp CCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEET
T ss_pred CCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCCCcccchh
Confidence 345678888888844 57888888 999999999999999955444
No 420
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=65.31 E-value=4.1 Score=37.15 Aligned_cols=40 Identities=15% Similarity=-0.026 Sum_probs=35.2
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
-+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|.
T Consensus 239 ~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ 280 (394)
T 3mqt_A 239 DDLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGISVVQ 280 (394)
T ss_dssp TCHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCSEEC
T ss_pred ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCeEe
Confidence 478999999999999999998 78999999999865 77764
No 421
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=65.30 E-value=5.2 Score=36.45 Aligned_cols=40 Identities=20% Similarity=-0.045 Sum_probs=35.2
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
-+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|.
T Consensus 244 ~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ 285 (394)
T 3mkc_A 244 DDLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHLLQ 285 (394)
T ss_dssp TCHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSEEC
T ss_pred hhHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCeEe
Confidence 478999999999999999988 78999999999976 67663
No 422
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=65.26 E-value=59 Score=28.23 Aligned_cols=129 Identities=14% Similarity=0.086 Sum_probs=0.0
Q ss_pred HHHHHHHHHHCCCceeecCCCCccHHHHHHhccc-cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcc---hHHHHhhh
Q 039466 91 EVATARAAASCNTIMVLSFTSSCSIEEVAASCNA-AYKKRDMAATLVQRAERNGFMALVLTADTPRLDR---READIKNK 166 (263)
Q Consensus 91 e~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~-~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~---R~~d~r~~ 166 (263)
+...|+.+.++|+.+++ ...|+--+.-=.++ ..-..+.+....++..++--.++++ +|.|..+. -++-++|.
T Consensus 26 Da~sA~l~e~aG~d~il---vGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv-aD~pfgsy~~s~~~a~~na 101 (275)
T 1o66_A 26 ESSFAALMDDAGVEMLL---VGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIV-SDLPFGAYQQSKEQAFAAA 101 (275)
T ss_dssp SHHHHHHHHHTTCCEEE---ECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEE-EECCTTSSSSCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEE---ECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEE-EECCCCCccCCHHHHHHHH
Q ss_pred hhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEE-----------------EEec-----
Q 039466 167 MIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPIL-----------------IKGV----- 224 (263)
Q Consensus 167 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPii-----------------lKGI----- 224 (263)
..+-. .....+.. -++..--+.|+.+++. ++||+ +.|=
T Consensus 102 ~rl~k-aGa~aVkl------------------Edg~e~~~~I~al~~a-gIpV~gHiGLtPQs~~~~ggf~v~grt~~a~ 161 (275)
T 1o66_A 102 AELMA-AGAHMVKL------------------EGGVWMAETTEFLQMR-GIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQ 161 (275)
T ss_dssp HHHHH-TTCSEEEE------------------ECSGGGHHHHHHHHHT-TCCEEEEEESCGGGTTC-----------CHH
T ss_pred HHHHH-cCCcEEEE------------------CCcHHHHHHHHHHHHc-CCCeEeeeccCceeecccCCeEEEeChHHHH
Q ss_pred CCHHHHHHHHHcCCCEEEE
Q 039466 225 LTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 225 ~s~eDA~~a~~~G~dgI~V 243 (263)
.-.+||+...++||++|++
T Consensus 162 ~~i~rA~a~~eAGA~~ivl 180 (275)
T 1o66_A 162 ALLNDAKAHDDAGAAVVLM 180 (275)
T ss_dssp HHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCcEEEE
No 423
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=65.22 E-value=8.8 Score=34.95 Aligned_cols=46 Identities=17% Similarity=0.204 Sum_probs=37.9
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE--cCCCC
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV--SNHGA 248 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V--SNHGG 248 (263)
-+|+.+++|++.+++||..=+ +.+.+|++.+++.| +|.|.+ +..||
T Consensus 245 ~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~GG 294 (391)
T 4e8g_A 245 NTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIGG 294 (391)
T ss_dssp SSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTS
T ss_pred ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCC
Confidence 479999999999999999988 78999999999976 677643 34444
No 424
>3kzp_A LMO0111 protein, putative diguanylate cyclase/phosphodiesterase; EAL-domain, structural genomics, PSI-2; 2.00A {Listeria monocytogenes}
Probab=65.01 E-value=6.2 Score=32.48 Aligned_cols=36 Identities=19% Similarity=0.221 Sum_probs=30.4
Q ss_pred HHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEE
Q 039466 206 KDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGI 241 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI 241 (263)
+.+-.+.+..++.+|+.||-+.++...+.+.||+.+
T Consensus 189 ~~i~~~a~~lg~~viaeGVEt~~~~~~l~~~G~~~~ 224 (235)
T 3kzp_A 189 KAWANFAQKNKLDFVVEGIETKETMTLLESHGVSIF 224 (235)
T ss_dssp HHHHHHHHHTTCEEEEEEECSTHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHcCCEEEEEEecCHHHHHHHHHcCCCEe
Confidence 345556677899999999999999999999999843
No 425
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=64.85 E-value=32 Score=31.75 Aligned_cols=43 Identities=28% Similarity=0.227 Sum_probs=31.1
Q ss_pred HHHHHHhhcCCCEEEEec----CCHHHHHHHHHcCCCEEEEc--CCCCC
Q 039466 207 DIEWLRSITNLPILIKGV----LTREDAIKAVEVGVAGIIVS--NHGAR 249 (263)
Q Consensus 207 dl~~lr~~~~lPiilKGI----~s~eDA~~a~~~G~dgI~VS--NHGGR 249 (263)
-++.|++.+++||-+-.= +...-+..|+++||+.|..| +-|+|
T Consensus 214 lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~ti~GlGER 262 (423)
T 3ivs_A 214 LIRTLRGVVSCDIECHFHNDTGMAIANAYCALEAGATHIDTSILGIGER 262 (423)
T ss_dssp HHHHHHHHCSSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSST
T ss_pred HHHHHHhhcCCeEEEEECCCCchHHHHHHHHHHhCCCEEEEecccccCc
Confidence 467788888877644431 67788999999999998865 34544
No 426
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=64.84 E-value=5.1 Score=33.55 Aligned_cols=35 Identities=14% Similarity=0.058 Sum_probs=30.4
Q ss_pred HHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEE
Q 039466 207 DIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGI 241 (263)
Q Consensus 207 dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI 241 (263)
.+-.+.+..++.+|+.||-+.++...+.+.||+.+
T Consensus 204 ~i~~~a~~l~~~viaeGVEt~~~~~~l~~~G~~~~ 238 (250)
T 4f3h_A 204 EITSRAQPTGILTVAEFVADAQSMSSFFTAGVDYV 238 (250)
T ss_dssp HTHHHHHHHTCEEEECCCCCHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHcCCEEEEeccCCHHHHHHHHHcCCCEE
Confidence 34555667899999999999999999999999976
No 427
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=64.73 E-value=10 Score=34.42 Aligned_cols=40 Identities=30% Similarity=0.540 Sum_probs=35.3
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
+|+.+++|++.+++||..=+ +.+.+|++.+++.| +|.|.+
T Consensus 231 ~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~ 272 (386)
T 3fv9_G 231 SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVGL 272 (386)
T ss_dssp SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEE
Confidence 89999999999999999988 78999999999975 776643
No 428
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=64.59 E-value=8.7 Score=34.71 Aligned_cols=47 Identities=17% Similarity=0.184 Sum_probs=38.7
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE--cCCCC
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV--SNHGA 248 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V--SNHGG 248 (263)
.-+|+.+++|++.+++||..=+ +.+.+|.+++++.| +|.|.+ +..||
T Consensus 230 ~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GG 280 (381)
T 3fcp_A 230 AHDNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAYALKIAKAGG 280 (381)
T ss_dssp TTCHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTS
T ss_pred cccHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCC
Confidence 3479999999999999999988 78999999999864 777755 44455
No 429
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=64.49 E-value=6.3 Score=36.17 Aligned_cols=41 Identities=17% Similarity=0.151 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
.-+|+.+++|++.+++||..=+ +.+++|++.+++.| +|.|.
T Consensus 238 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ 280 (412)
T 4e4u_A 238 PGQEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQ 280 (412)
T ss_dssp SSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEEC
T ss_pred hhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEE
Confidence 3478999999999999999988 78999999999976 67653
No 430
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=64.26 E-value=6.3 Score=35.80 Aligned_cols=41 Identities=15% Similarity=0.110 Sum_probs=35.3
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
.-+|+.+++|++.+++||..=+ +.+++|++.+++.| +|.|.
T Consensus 250 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ 292 (383)
T 3toy_A 250 QENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIM 292 (383)
T ss_dssp TTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEEC
T ss_pred cchHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEE
Confidence 3478999999999999999998 78999999999876 66653
No 431
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=64.25 E-value=27 Score=31.48 Aligned_cols=99 Identities=10% Similarity=0.097 Sum_probs=57.5
Q ss_pred ccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCH
Q 039466 126 YKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSW 205 (263)
Q Consensus 126 ~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 205 (263)
..|.+...++++.|+++|++++=.-.=.| +.+-..+. ..+.. ........+.... -.++|
T Consensus 31 ~gs~e~a~~li~~ak~aGadavKfq~~k~------~tl~s~~~----~~fq~-------~~~~~~~y~~~~~---~~l~~ 90 (349)
T 2wqp_A 31 EGSLKTAFEMVDAAYNAGAEVVKHQTHIV------EDEMSDEA----KQVIP-------GNADVSIYEIMER---CALNE 90 (349)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEEECCH------HHHCCGGG----GGCCC-------TTCSSCHHHHHHH---HCCCH
T ss_pred cCCHHHHHHHHHHHHHhCCCEEeeeeccc------ccccCcch----hcccc-------CCCCccHHHHHHH---hCCCH
Confidence 35778899999999999999865432111 11100000 00000 0001111122222 23566
Q ss_pred HH---HHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 206 KD---IEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 206 ~d---l~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
+. |...++..++|++- .+++.+++..+.++|++.+-|..
T Consensus 91 e~~~~L~~~~~~~Gi~~~s-t~~d~~svd~l~~~~v~~~KI~S 132 (349)
T 2wqp_A 91 EDEIKLKEYVESKGMIFIS-TLFSRAAALRLQRMDIPAYKIGS 132 (349)
T ss_dssp HHHHHHHHHHHHTTCEEEE-EECSHHHHHHHHHHTCSCEEECG
T ss_pred HHHHHHHHHHHHhCCeEEE-eeCCHHHHHHHHhcCCCEEEECc
Confidence 65 45555678888765 49999999999999999987753
No 432
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=64.12 E-value=13 Score=33.75 Aligned_cols=40 Identities=15% Similarity=0.183 Sum_probs=33.7
Q ss_pred CCHHHHHHHHhhcCCCEEEEecCCHHHHHHHHHcC-CCEEEE
Q 039466 203 LSWKDIEWLRSITNLPILIKGVLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G-~dgI~V 243 (263)
-+|+.+++|++.+++|| --.+.+++|++.+++.| +|.|.+
T Consensus 227 ~d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~d~v~~ 267 (391)
T 3gd6_A 227 NDFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAIDIFNI 267 (391)
T ss_dssp TCHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCCSEEEE
T ss_pred hhHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCCCEEEE
Confidence 47999999999999999 44489999999999876 777653
No 433
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=63.80 E-value=2.9 Score=36.77 Aligned_cols=51 Identities=20% Similarity=0.078 Sum_probs=42.6
Q ss_pred CCHHHHHHHHhhc-----CCCEEEEecCCHHHHHHHHHcCCCEEEEcC--CCCCCCCC
Q 039466 203 LSWKDIEWLRSIT-----NLPILIKGVLTREDAIKAVEVGVAGIIVSN--HGARQLDY 253 (263)
Q Consensus 203 ~~W~dl~~lr~~~-----~lPiilKGI~s~eDA~~a~~~G~dgI~VSN--HGGRqlD~ 253 (263)
++-++++.+++.. +.|+.+-|=.+++.+....+.|||+|.|+. |..+-+|-
T Consensus 222 ~~~e~l~~av~~l~~~~~~v~ieASGGIt~eni~~~a~tGVD~IsvGslt~sa~~~D~ 279 (285)
T 1o4u_A 222 LSPEEVKDISRRIKDINPNVIVEVSGGITEENVSLYDFETVDVISSSRLTLQEVFVDL 279 (285)
T ss_dssp CCHHHHHHHHHHHHHHCTTSEEEEEECCCTTTGGGGCCTTCCEEEEGGGTSSCCCCCE
T ss_pred CCHHHHHHHHHHhhccCCCceEEEECCCCHHHHHHHHHcCCCEEEEeHHHcCCCCcce
Confidence 5667777666654 789999997789999999999999999998 88888874
No 434
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=63.79 E-value=20 Score=31.20 Aligned_cols=44 Identities=14% Similarity=0.134 Sum_probs=32.1
Q ss_pred CHHHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEEcCCC
Q 039466 204 SWKDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIVSNHG 247 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~VSNHG 247 (263)
+-+.++.+.+.+++|+.+-+.-..-+...+.+.|++-|.+.||.
T Consensus 192 ~~~~~~~i~~~~~~P~n~~~~~~~~~~~eL~~lGv~~v~~~~~~ 235 (275)
T 2ze3_A 192 QSQDIRALADALRVPLNVMAFPGSPVPRALLDAGAARVSFGQSL 235 (275)
T ss_dssp CHHHHHHHHHHCSSCEEEECCTTSCCHHHHHHTTCSEEECTTHH
T ss_pred CHHHHHHHHHhcCCCEEEecCCCCCCHHHHHHcCCcEEEEChHH
Confidence 46788899999999987764311122466779999999988874
No 435
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=63.44 E-value=22 Score=30.80 Aligned_cols=22 Identities=23% Similarity=0.187 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEE
Q 039466 128 KRDMAATLVQRAERNGFMALVL 149 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~v 149 (263)
|.+..++++++..+.|++.|++
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~ 40 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVP 40 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEET
T ss_pred CHHHHHHHHHHHHHcCCCEEEE
Confidence 6677888899888899888874
No 436
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=63.43 E-value=33 Score=30.31 Aligned_cols=122 Identities=9% Similarity=0.078 Sum_probs=0.0
Q ss_pred CCChhHHHHHHHHHHCCCc--eeecCCCCccHHHHHHhccc--------cccCHHHHHHHHHHHHHcCC--CEEEEccCC
Q 039466 86 ANPEGEVATARAAASCNTI--MVLSFTSSCSIEEVAASCNA--------AYKKRDMAATLVQRAERNGF--MALVLTADT 153 (263)
Q Consensus 86 ~~~~ge~a~AraA~~~gi~--~~lss~s~~sieeV~~~~~~--------~~~d~~~~~~li~ra~~aG~--~al~vTvD~ 153 (263)
.+|+....++++|-++|.. -++.+.+....+++...+.. -.+|.+...++++++.++|+ +-|++..-.
T Consensus 131 ~~~~~~~~V~eaal~aga~~k~iINdvs~~~~~~~~~~aa~~g~~vv~m~~~dv~~l~~~~~~a~~~Gi~~e~IilDPg~ 210 (310)
T 2h9a_B 131 GVEEKDAEIFPVIGEALSGRNCLLSSATKDNYKPIVATCMVHGHSVVASAPLDINLSKQLNIMIMEMNLAPNRIIMDPLI 210 (310)
T ss_dssp SCHHHHHHHHHHHHHHTTTSCCEEEEECTTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECCC
T ss_pred CCCCCCHHHHHHHHHhCCCCCCEEEECCCCccHHHHHHHHHhCCCEEEEChhHHHHHHHHHHHHHHCCCChhhEEEeCCC
Q ss_pred CCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHHHH----HhhcCCCEEE----E---
Q 039466 154 PRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIEWL----RSITNLPILI----K--- 222 (263)
Q Consensus 154 ~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~~l----r~~~~lPiil----K--- 222 (263)
-.+|.-...-.+ +++-|+++ -+..+.|+++ |
T Consensus 211 g~~g~~~e~~~~--------------------------------------~l~~ir~~al~~~~~lg~P~l~g~SrK~~~ 252 (310)
T 2h9a_B 211 GALGYGIEYSYS--------------------------------------IIERMRLGALTGDKILAMPVVCFIGQEAWK 252 (310)
T ss_dssp CCTTTTHHHHHH--------------------------------------HHHHHHHHHHTTCGGGCSCBEECHHHHHTT
T ss_pred ccccCchHhHHH--------------------------------------HHHHHHHhhhhhhhcCCCCEEEEccCcccc
Q ss_pred ------------------ecC-CHHHHHHHHHcCCCEEEEcC
Q 039466 223 ------------------GVL-TREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 223 ------------------GI~-s~eDA~~a~~~G~dgI~VSN 245 (263)
+.. +.--+..++..|++-|.|.+
T Consensus 253 ~~es~i~~~~~~g~~~~R~~~~~~a~a~~~~~~Ga~ivrvHd 294 (310)
T 2h9a_B 253 AKEAKDPEVAEWGDYALRAIHWETVTTVALIQAGGHLFVMRH 294 (310)
T ss_dssp SHHHHCSCCGGGCCHHHHHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred cccchhhhcccCCChHHcchhHHHHHHHHHHHcCCCEEEECC
No 437
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=63.00 E-value=23 Score=31.70 Aligned_cols=41 Identities=22% Similarity=0.181 Sum_probs=28.8
Q ss_pred CHHHHHHHHhhc--CCCEEEEec--------CCHHHHHH----HHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSIT--NLPILIKGV--------LTREDAIK----AVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~--~lPiilKGI--------~s~eDA~~----a~~~G~dgI~VSN 245 (263)
--+-++.+|+.+ +.||.+|== .+.+|+.. +.++ +|.|.||+
T Consensus 196 ~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~ 250 (343)
T 3kru_A 196 LIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSS 250 (343)
T ss_dssp HHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEEC
T ss_pred HHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccC
Confidence 346789999999 589999821 24566443 3457 99999983
No 438
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=62.92 E-value=8.6 Score=34.71 Aligned_cols=42 Identities=5% Similarity=-0.153 Sum_probs=30.4
Q ss_pred HHHHHHHHhhcCC-CEEEEec-----------CCHHH----HHHHHHcCCCEEEEcCC
Q 039466 205 WKDIEWLRSITNL-PILIKGV-----------LTRED----AIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 205 W~dl~~lr~~~~l-PiilKGI-----------~s~eD----A~~a~~~G~dgI~VSNH 246 (263)
-+-++.+|+.++- ||.+|== .+.++ |+.+.+.|+|+|.||+.
T Consensus 215 ~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~ 272 (365)
T 2gou_A 215 DEVVAALVDAIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEV 272 (365)
T ss_dssp HHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHcCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 3557888888753 9999621 14456 67777899999999973
No 439
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=62.79 E-value=76 Score=27.45 Aligned_cols=24 Identities=25% Similarity=0.199 Sum_probs=19.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcc
Q 039466 128 KRDMAATLVQRAERNGFMALVLTA 151 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTv 151 (263)
+-..+.++.+.|+++|++++++..
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~~ 103 (297)
T 2rfg_A 80 NPVEAVRYAQHAQQAGADAVLCVA 103 (297)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcC
Confidence 445677889999999999998873
No 440
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=62.64 E-value=84 Score=27.93 Aligned_cols=78 Identities=10% Similarity=0.070 Sum_probs=41.8
Q ss_pred ceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH---HHHh-ccc-------cc-cCHHHHHHHH
Q 039466 74 SIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE---VAAS-CNA-------AY-KKRDMAATLV 136 (263)
Q Consensus 74 Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee---V~~~-~~~-------~~-~d~~~~~~li 136 (263)
|.++.|+.-.+-.+.++-..+++-.-+.|+- ++.||.+ +.|.|| |.+. ..+ +- .+-..+.++.
T Consensus 32 ~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la 111 (344)
T 2hmc_A 32 PALMTPCRQDRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHA 111 (344)
T ss_dssp EBCCCCBCTTSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHH
T ss_pred EeeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHH
Confidence 4445555433323334444555555555653 3445433 345544 2221 111 11 2445677889
Q ss_pred HHHHHcCCCEEEEcc
Q 039466 137 QRAERNGFMALVLTA 151 (263)
Q Consensus 137 ~ra~~aG~~al~vTv 151 (263)
+.|+++|++++++..
T Consensus 112 ~~A~~~Gadavlv~~ 126 (344)
T 2hmc_A 112 VHAQKVGAKGLMVIP 126 (344)
T ss_dssp HHHHHHTCSEEEECC
T ss_pred HHHHhcCCCEEEECC
Confidence 999999999998873
No 441
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=62.64 E-value=79 Score=27.59 Aligned_cols=79 Identities=15% Similarity=0.068 Sum_probs=47.6
Q ss_pred cceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc-------c-ccCHHHH
Q 039466 73 ASIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA-------A-YKKRDMA 132 (263)
Q Consensus 73 ~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~-------~-~~d~~~~ 132 (263)
.|.++.|+.-.+-.+.++-..+++-.-+.|+- ++.||.+ +.|.|| +.+...+ . -.+-..+
T Consensus 12 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~a 91 (311)
T 3h5d_A 12 ITAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDS 91 (311)
T ss_dssp EEECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHH
T ss_pred EEeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHH
Confidence 35556676544444556666777776677763 4455544 245554 2233322 1 1355667
Q ss_pred HHHHHHHHHcCC-CEEEEcc
Q 039466 133 ATLVQRAERNGF-MALVLTA 151 (263)
Q Consensus 133 ~~li~ra~~aG~-~al~vTv 151 (263)
.++.+.|+++|+ +++++..
T Consensus 92 i~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 92 IEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHhcCCCcEEEEcC
Confidence 888999999997 9988764
No 442
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=62.52 E-value=27 Score=31.95 Aligned_cols=100 Identities=11% Similarity=-0.011 Sum_probs=55.8
Q ss_pred ccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCH
Q 039466 126 YKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSW 205 (263)
Q Consensus 126 ~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 205 (263)
..|.+...++++.|+++|++++=.-.=.|. .+-+... +.+.. .........+.+. .-.+.|
T Consensus 40 ~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~------tl~s~~~----~~fq~------~~~~~~~~ye~~~---~~~l~~ 100 (385)
T 1vli_A 40 DGKLDQAFALIDAAAEAGADAVKFQMFQAD------RMYQKDP----GLYKT------AAGKDVSIFSLVQ---SMEMPA 100 (385)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEECCBCGG------GGTSCCC-------------------CCCHHHHGG---GBSSCG
T ss_pred cccHHHHHHHHHHHHHhCCCEEeeeeeccC------cccCcch----hhhcc------CCCCCccHHHHHH---hcCCCH
Confidence 467788999999999999998764211110 0000000 00000 0000001111111 113455
Q ss_pred HH---HHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 206 KD---IEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 206 ~d---l~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
+. |...++..++|++- -+++.+++..+.++|++.+=|..
T Consensus 101 e~~~~L~~~~~~~Gi~~~s-tpfD~~svd~l~~~~vd~~KIgS 142 (385)
T 1vli_A 101 EWILPLLDYCREKQVIFLS-TVCDEGSADLLQSTSPSAFKIAS 142 (385)
T ss_dssp GGHHHHHHHHHHTTCEEEC-BCCSHHHHHHHHTTCCSCEEECG
T ss_pred HHHHHHHHHHHHcCCcEEE-ccCCHHHHHHHHhcCCCEEEECc
Confidence 54 55556678888765 59999999999999999987753
No 443
>3tlq_A Regulatory protein YDIV; anti-FLHD4C2 factor, repress motility, transcription; 1.91A {Escherichia coli}
Probab=62.38 E-value=6.2 Score=33.07 Aligned_cols=49 Identities=14% Similarity=0.051 Sum_probs=37.5
Q ss_pred HHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEEcCCCCCCCCCchhhhccc
Q 039466 206 KDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIVSNHGARQLDYTPATISAL 261 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~VSNHGGRqlD~~~~~i~~L 261 (263)
+.|-.+.+..++.+|+.||-|.++...+.+.||+.+- |-=. .|-|++.|
T Consensus 188 ~~ii~~a~~l~~~vvAEGVEt~~q~~~l~~lG~~~~Q-----Gy~f--~P~p~~el 236 (242)
T 3tlq_A 188 RAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHALQ-----GCLW--PAVPINQI 236 (242)
T ss_dssp HHHHHHHTTTCSEEEECCCCSHHHHHHHGGGCCSEEC-----STTS--CCEEGGGG
T ss_pred HHHHHHHHHcCCEEEEEeCCcHHHHHHHHHcCCCEEe-----CCCC--CCCCHHHH
Confidence 3455666778899999999999999999999999873 4333 35555554
No 444
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=62.11 E-value=4.7 Score=34.71 Aligned_cols=40 Identities=8% Similarity=0.023 Sum_probs=34.4
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEcC
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VSN 245 (263)
+.+.|+.+.+.+++||.+=| |-+. |+++.+ +||+-|++..
T Consensus 64 n~~~i~~i~~~~~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs 104 (260)
T 2agk_A 64 NDDAAREALQESPQFLQVGGGINDT-NCLEWL-KWASKVIVTS 104 (260)
T ss_dssp CHHHHHHHHHHSTTTSEEESSCCTT-THHHHT-TTCSCEEECG
T ss_pred CHHHHHHHHhcCCceEEEeCCCCHH-HHHHHh-cCCCEEEECc
Confidence 56789999999999999966 8765 999999 9999988654
No 445
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=62.07 E-value=3.9 Score=37.62 Aligned_cols=41 Identities=17% Similarity=0.093 Sum_probs=35.8
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
.-+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|.
T Consensus 257 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~ 299 (418)
T 3r4e_A 257 AENQEAFRLVRQHTVTPLAVGEIFNTIWDAKDLIQNQLIDYIR 299 (418)
T ss_dssp CSSGGGGHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEEC
T ss_pred ccCHHHHHHHHhcCCCCEEEcCCcCCHHHHHHHHHcCCCCeEe
Confidence 3478999999999999999998 78999999999976 77664
No 446
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=61.90 E-value=20 Score=25.40 Aligned_cols=40 Identities=15% Similarity=0.255 Sum_probs=32.2
Q ss_pred HHHHHHHHhhcCCCEEEE-ecCCHHHHHHHHHcCCCEEEEc
Q 039466 205 WKDIEWLRSITNLPILIK-GVLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilK-GI~s~eDA~~a~~~G~dgI~VS 244 (263)
++-++++|+..+.|+|+= +-.+.+++..+.+.|+++.+.-
T Consensus 62 ~~~~~~lr~~~~~~ii~~t~~~~~~~~~~~~~~ga~~~l~K 102 (120)
T 3f6p_A 62 VEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDYVTK 102 (120)
T ss_dssp HHHHHHHHTTCCSCEEEEEESSCHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEECCCChHHHHHHHhCCcceeEcC
Confidence 566888998888997754 4567888999999999998753
No 447
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=61.78 E-value=22 Score=30.79 Aligned_cols=25 Identities=20% Similarity=0.169 Sum_probs=20.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccC
Q 039466 128 KRDMAATLVQRAERNGFMALVLTAD 152 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~vTvD 152 (263)
|.+..++++++..+.|++.|++.--
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~Gt 44 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVGT 44 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESST
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc
Confidence 6677889999988899999886444
No 448
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=61.65 E-value=8.9 Score=33.34 Aligned_cols=36 Identities=14% Similarity=0.027 Sum_probs=31.6
Q ss_pred HHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEE
Q 039466 206 KDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGI 241 (263)
Q Consensus 206 ~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI 241 (263)
+.|-.+.+..++.+|+.||-+.++...+.+.||+.+
T Consensus 223 ~~ii~la~~lg~~vvAEGVEt~~q~~~l~~lG~d~~ 258 (294)
T 2r6o_A 223 TTILALARGLGMEVVAEGIETAQQYAFLRDRGCEFG 258 (294)
T ss_dssp HHHHHHHHHTTCEEEECCCCSHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHCCCEEEEecCCcHHHHHHHHHcCCCEE
Confidence 345566678899999999999999999999999976
No 449
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=61.55 E-value=9.1 Score=31.36 Aligned_cols=41 Identities=22% Similarity=0.199 Sum_probs=29.8
Q ss_pred CHHHHHHHHhhcCC-CEEEEe-cCC-HHHHHHHHHcCCCEEEEc
Q 039466 204 SWKDIEWLRSITNL-PILIKG-VLT-REDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 204 ~W~dl~~lr~~~~l-PiilKG-I~s-~eDA~~a~~~G~dgI~VS 244 (263)
.-+.++.+|+..+. ++++=| |-. ..++..++++|+|+|+|+
T Consensus 142 ~~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~aGad~vvvG 185 (208)
T 2czd_A 142 RPERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKAGADYIIVG 185 (208)
T ss_dssp STHHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHHTCSEEEEC
T ss_pred ChHHHHHHHHhCCCCeEEEECCCCCCCCCHHHHHHcCCCEEEEC
Confidence 34688899998874 555555 643 237888999999999874
No 450
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=61.27 E-value=12 Score=30.28 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=31.4
Q ss_pred HHHHHHHHhh-cCCCEEEEecC--CHHH-HHHHHHcCCCEEEEcC
Q 039466 205 WKDIEWLRSI-TNLPILIKGVL--TRED-AIKAVEVGVAGIIVSN 245 (263)
Q Consensus 205 W~dl~~lr~~-~~lPiilKGI~--s~eD-A~~a~~~G~dgI~VSN 245 (263)
.+.++++|+. .+.||.+-=+. -++. ++.++++|+|+|+|..
T Consensus 41 ~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~ 85 (211)
T 3f4w_A 41 VNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLG 85 (211)
T ss_dssp THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEET
T ss_pred HHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeC
Confidence 4679999998 68998764432 2455 8999999999999943
No 451
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=61.27 E-value=2.4 Score=37.51 Aligned_cols=50 Identities=12% Similarity=0.129 Sum_probs=38.0
Q ss_pred CCHHHHHHHHhhcC-----CCEEEEecCCHHHHHHHHHcCCCEEEEcC--CCCCCCC
Q 039466 203 LSWKDIEWLRSITN-----LPILIKGVLTREDAIKAVEVGVAGIIVSN--HGARQLD 252 (263)
Q Consensus 203 ~~W~dl~~lr~~~~-----lPiilKGI~s~eDA~~a~~~G~dgI~VSN--HGGRqlD 252 (263)
++-++++.+++..+ +||.+-|=.+.+.+...++.|||+|.||. |+-.-+|
T Consensus 226 ~~~~~l~~~v~~l~~~~~~~~I~ASGGIt~~ni~~~~~aGaD~i~vGs~i~~a~~~D 282 (299)
T 2jbm_A 226 FKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALD 282 (299)
T ss_dssp CCHHHHHHHHHHHHHHCTTSEEEEESSCCTTTHHHHCCTTCCEEECTHHHHSCCCCC
T ss_pred CCHHHHHHHHHHhhccCCCeeEEEECCCCHHHHHHHHHCCCCEEEEChhhcCCCCcc
Confidence 45677776665543 78999983399999999999999999986 5544444
No 452
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=61.27 E-value=12 Score=34.11 Aligned_cols=46 Identities=13% Similarity=0.054 Sum_probs=37.9
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE--cCCCC
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV--SNHGA 248 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V--SNHGG 248 (263)
-+++.+++|++.+++||..=+ +.+++|++.+++.| +|.|.+ +.-||
T Consensus 252 ~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GG 301 (410)
T 3dip_A 252 DNIPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAIDFVMLDLTWCGG 301 (410)
T ss_dssp TCHHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCSEEEECTTTSSC
T ss_pred ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCeEeecccccCC
Confidence 378999999999999999988 78999999999976 676654 34454
No 453
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=61.25 E-value=4.9 Score=34.02 Aligned_cols=47 Identities=15% Similarity=0.345 Sum_probs=38.6
Q ss_pred CHHHHHHHHhhcCCCEEEEecCCHHH---------HHHHHHcCCCEEEEcCCCCCCCC
Q 039466 204 SWKDIEWLRSITNLPILIKGVLTRED---------AIKAVEVGVAGIIVSNHGARQLD 252 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKGI~s~eD---------A~~a~~~G~dgI~VSNHGGRqlD 252 (263)
...+|..+++..++||..|- .++.+ +..+.++||++|++ +|-=|.++
T Consensus 47 ~~~~L~~v~~~~~i~v~aQd-v~~~~~Ga~TGeis~~~l~~~Ga~~Vll-ghseRR~~ 102 (225)
T 1hg3_A 47 QLVDLRMIAESVEIPVFAQH-IDPIKPGSHTGHVLPEAVKEAGAVGTLL-NHSENRMI 102 (225)
T ss_dssp CHHHHHHHHHSCSSCBEESC-CCSCCSBSCTTCCCHHHHHHTTCCEEEE-SCGGGCCB
T ss_pred CHHHHHHHHHhcCCceeeee-CCcccCCCccCcccHHHHHHcCCCEEEE-CcchhcCC
Confidence 45789999999999999998 67788 99999999998865 66665554
No 454
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=61.25 E-value=79 Score=27.17 Aligned_cols=78 Identities=18% Similarity=0.090 Sum_probs=43.7
Q ss_pred ceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCC---CccHHH-------HHHhccc-------c-ccCHHHHH
Q 039466 74 SIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTS---SCSIEE-------VAASCNA-------A-YKKRDMAA 133 (263)
Q Consensus 74 Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s---~~siee-------V~~~~~~-------~-~~d~~~~~ 133 (263)
|.++.|+.-.+-.+.++-..+.+-.-+.|+- +++||.+ +.|.|| +.+...+ + -.+-..+.
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai 86 (291)
T 3tak_A 7 VAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAI 86 (291)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHH
T ss_pred eeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHH
Confidence 4455565433333344444566655555653 4445544 234554 1222222 1 13556678
Q ss_pred HHHHHHHHcCCCEEEEcc
Q 039466 134 TLVQRAERNGFMALVLTA 151 (263)
Q Consensus 134 ~li~ra~~aG~~al~vTv 151 (263)
++.+.|+++|++++++..
T Consensus 87 ~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 87 ELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHhcCCCEEEEcC
Confidence 889999999999998864
No 455
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=61.18 E-value=27 Score=30.38 Aligned_cols=22 Identities=27% Similarity=0.261 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEE
Q 039466 128 KRDMAATLVQRAERNGFMALVL 149 (263)
Q Consensus 128 d~~~~~~li~ra~~aG~~al~v 149 (263)
|.+..++++++..+.|++.|++
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v 40 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVP 40 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEE
Confidence 6677888899988899988875
No 456
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=60.92 E-value=35 Score=29.45 Aligned_cols=139 Identities=16% Similarity=0.217 Sum_probs=74.0
Q ss_pred ChhHHHHHHHHHHCCCceeecCCCCccHHHHHHhccc------cccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHH
Q 039466 88 PEGEVATARAAASCNTIMVLSFTSSCSIEEVAASCNA------AYKKRDMAATLVQRAERNGFMALVLTADTPRLDRREA 161 (263)
Q Consensus 88 ~~ge~a~AraA~~~gi~~~lss~s~~sieeV~~~~~~------~~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~ 161 (263)
.+|-..+.+.+++.|+|++..-....+++.+.+..+- -.+|-+ +++.+...| ..|-+.....+.=+
T Consensus 61 ~~GL~~l~~~~~e~Glp~~te~~d~~~~~~l~~~vd~~~IgA~~~rn~~----ll~~~a~~~---~PV~lK~G~~~t~~- 132 (267)
T 2nwr_A 61 EYGVKALRKVKEEFGLKITTDIHESWQAEPVAEVADIIQIPAFLCRQTD----LLLAAAKTG---RAVNVKKGQFLAPW- 132 (267)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECSSGGGHHHHHTTCSEEEECGGGTTCHH----HHHHHHTTT---SEEEEECCTTCCGG-
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCHHhHHHHHhcCCEEEECcccccCHH----HHHHHHcCC---CcEEEeCCCCCCHH-
Confidence 4565678889999999999888888888888774321 223433 666654443 23334433321111
Q ss_pred HHhhhhhhhhhhhhhhccccCCCC-CCCccHHHHHHHhcCCCCCHHHHHHHHhhcCCCEEE----------------Eec
Q 039466 162 DIKNKMIAQQLKNLEGLLSTKVTS-DTGSNLEAYAKETMDPSLSWKDIEWLRSITNLPILI----------------KGV 224 (263)
Q Consensus 162 d~r~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~W~dl~~lr~~~~lPiil----------------KGI 224 (263)
++.+....- ..... .++.- ..... + .......+-..+..+++. + |||+ .|-
T Consensus 133 e~~~Av~~i--~~~GN---~~i~L~~rG~~---~--~y~~~~~dl~~i~~lk~~-~-pVivD~sH~~q~p~G~s~hs~g~ 200 (267)
T 2nwr_A 133 DTKNVVEKL--KFGGA---KEIYLTERGTT---F--GYNNLVVDFRSLPIMKQW-A-KVIYDATHSVQLPGGLGDKSGGM 200 (267)
T ss_dssp GGHHHHHHH--HHTTC---SSEEEEECCEE---C--SSSCEECCTTHHHHHTTT-S-EEEEETTGGGCCTTC------CC
T ss_pred HHHHHHHHH--HHcCC---CeEEEEECCCC---C--CCCccccCHHHHHHHHHc-C-CEEEcCCcccccCCCcCcCCCCc
Confidence 222211100 00000 00000 00000 0 000111455678888887 5 9988 341
Q ss_pred --CCHHHHHHHHHcCCCEEEEcCC
Q 039466 225 --LTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 225 --~s~eDA~~a~~~G~dgI~VSNH 246 (263)
+-..-++.|+..|++|+++=-|
T Consensus 201 ~~~~~~ia~aava~Ga~G~mIE~H 224 (267)
T 2nwr_A 201 REFIFPLIRAAVAVGCDGVFMETH 224 (267)
T ss_dssp GGGHHHHHHHHHHHCCSEEEEEEE
T ss_pred hhHHHHHHHHHHHcCCCEEEEEec
Confidence 2256677888999999999766
No 457
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=60.89 E-value=31 Score=30.84 Aligned_cols=23 Identities=0% Similarity=-0.130 Sum_probs=16.6
Q ss_pred HHHHHHHHcCCCEEEEccCCCCC
Q 039466 134 TLVQRAERNGFMALVLTADTPRL 156 (263)
Q Consensus 134 ~li~ra~~aG~~al~vTvD~~~~ 156 (263)
..++.+..+|++.|++.....+.
T Consensus 54 ~~~e~a~~~GaD~vilDlEha~~ 76 (339)
T 1izc_A 54 FVTKVLAATKPDFVWIDVEHGMF 76 (339)
T ss_dssp HHHHHHHHTCCSEEEEETTTSCC
T ss_pred HHHHHHHhCCCCEEEEECCCCCC
Confidence 34666778999999998865443
No 458
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=60.81 E-value=4.6 Score=37.31 Aligned_cols=40 Identities=15% Similarity=0.119 Sum_probs=35.2
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
-+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|.
T Consensus 265 ~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ 306 (425)
T 3vcn_A 265 ENQAGFRLIRQHTTTPLAVGEIFAHVWDAKQLIEEQLIDYLR 306 (425)
T ss_dssp SSTTHHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEEC
T ss_pred hhHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCeEe
Confidence 478899999999999999998 78999999999976 67664
No 459
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=60.78 E-value=9.1 Score=34.90 Aligned_cols=46 Identities=17% Similarity=0.183 Sum_probs=37.5
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE--cCCCC
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV--SNHGA 248 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V--SNHGG 248 (263)
-+++.+++|++.+++||..=+ +.+++|++.+++.| +|.|.+ +.-||
T Consensus 248 ~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~~~~GG 297 (400)
T 4dxk_A 248 DSLSSLTRYAAVSPAPISASETLGSRWAFRDLLETGAAGVVMLDISWCGG 297 (400)
T ss_dssp TSGGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCCCEEEECTTTTTH
T ss_pred ccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCC
Confidence 378889999999999999988 78999999999987 676643 34444
No 460
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=60.78 E-value=3 Score=37.42 Aligned_cols=41 Identities=12% Similarity=-0.064 Sum_probs=36.0
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC--CCEEEE
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG--VAGIIV 243 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G--~dgI~V 243 (263)
-+|+.+++|++.+++||..=+ +.+++|++.+++.| +|.|.+
T Consensus 222 ~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~ 265 (356)
T 3ro6_B 222 GRTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNI 265 (356)
T ss_dssp TCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEE
T ss_pred CcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEE
Confidence 379999999999999999998 78999999999965 888764
No 461
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=60.76 E-value=6.5 Score=36.47 Aligned_cols=39 Identities=13% Similarity=0.130 Sum_probs=34.5
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
+|+.+++|++.+++||..=+ +.+.+|++.+++.| +|.|.
T Consensus 279 d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ 319 (440)
T 3t6c_A 279 NTEWLKMLRQQSSTPIAMGELFVNVNEWKPLIDNKLIDYIR 319 (440)
T ss_dssp GGGGHHHHHHHCCSCEEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred hHHHHHHHHhhcCCCEEeCcccCCHHHHHHHHHcCCcccee
Confidence 67889999999999999988 78999999999976 67653
No 462
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=60.47 E-value=4.7 Score=37.23 Aligned_cols=41 Identities=12% Similarity=0.154 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
.-+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|.
T Consensus 263 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~ 305 (424)
T 3v3w_A 263 AENQESFKLIRQHTTTPLAVGEVFNSIHDCRELIQNQWIDYIR 305 (424)
T ss_dssp CSSTTHHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEEC
T ss_pred hHhHHHHHHHHhhCCCCEEEccCcCCHHHHHHHHHcCCCCeEe
Confidence 3478899999999999999998 78999999999976 67664
No 463
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=60.33 E-value=40 Score=28.91 Aligned_cols=78 Identities=12% Similarity=0.055 Sum_probs=53.0
Q ss_pred ccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCH
Q 039466 126 YKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSW 205 (263)
Q Consensus 126 ~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 205 (263)
..|.+...+++++++++|++++....=.|. . +.|. +. .+.|
T Consensus 33 ~~~~e~a~~~a~~l~~~Ga~~vk~~~fkpr----t----s~~~------------------------------~~-g~~~ 73 (262)
T 1zco_A 33 IESREQIMKVAEFLAEVGIKVLRGGAFKPR----T----SPYS------------------------------FQ-GYGE 73 (262)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSSCCC----S----STTS------------------------------CC-CCTH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEecccC----C----Cccc------------------------------cc-CccH
Confidence 357788899999999999987665432221 0 0000 00 1224
Q ss_pred HH---HHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEEc
Q 039466 206 KD---IEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 206 ~d---l~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~VS 244 (263)
+. ++.+++.+++|++- .+++++++..+.++ +|.+-|.
T Consensus 74 egl~~l~~~~~~~Gl~~~t-e~~d~~~~~~l~~~-vd~~kIg 113 (262)
T 1zco_A 74 KALRWMREAADEYGLVTVT-EVMDTRHVELVAKY-SDILQIG 113 (262)
T ss_dssp HHHHHHHHHHHHHTCEEEE-ECCCGGGHHHHHHH-CSEEEEC
T ss_pred HHHHHHHHHHHHcCCcEEE-eeCCHHhHHHHHhh-CCEEEEC
Confidence 44 55555678999987 59999999999999 9988774
No 464
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=60.27 E-value=15 Score=30.09 Aligned_cols=24 Identities=17% Similarity=0.221 Sum_probs=21.5
Q ss_pred ecCCHHHHHHHHHcCCCEEEEcCC
Q 039466 223 GVLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 223 GI~s~eDA~~a~~~G~dgI~VSNH 246 (263)
.+.++++++++.+.|+|.|.+++-
T Consensus 116 sv~t~~~~~~a~~~gaD~i~~~~~ 139 (221)
T 1yad_A 116 SVHSLEEAVQAEKEDADYVLFGHV 139 (221)
T ss_dssp EECSHHHHHHHHHTTCSEEEEECC
T ss_pred EcCCHHHHHHHHhCCCCEEEECCc
Confidence 478999999999999999999774
No 465
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=59.82 E-value=9.9 Score=33.29 Aligned_cols=51 Identities=22% Similarity=0.190 Sum_probs=39.4
Q ss_pred CCHHHHHHHHhh-----cCCCEEEEecCCHHHHHHHHHcCCCEEEEcC--CCCCCCCC
Q 039466 203 LSWKDIEWLRSI-----TNLPILIKGVLTREDAIKAVEVGVAGIIVSN--HGARQLDY 253 (263)
Q Consensus 203 ~~W~dl~~lr~~-----~~lPiilKGI~s~eDA~~a~~~G~dgI~VSN--HGGRqlD~ 253 (263)
++-++++.+++. .+.++.+-|=.+++.+....+.|||+|.||. |+.+.+|-
T Consensus 223 ~~~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~~a~tGVD~isvG~l~~~a~~~D~ 280 (284)
T 1qpo_A 223 FAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAETGVDYLAVGALTHSVRVLDI 280 (284)
T ss_dssp CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHHTTCSEEECGGGTSSBCCCCE
T ss_pred CCHHHHHHHHHHhhccCCCeEEEEECCCCHHHHHHHHhcCCCEEEECHHHcCCCCcce
Confidence 444555444443 2578999997899999999999999999998 88877774
No 466
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=59.64 E-value=12 Score=32.70 Aligned_cols=38 Identities=24% Similarity=0.254 Sum_probs=32.1
Q ss_pred CHHHHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEE
Q 039466 204 SWKDIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGII 242 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~ 242 (263)
+-+.++.+++. +++|.+=.|-++++++++.+.|||||+
T Consensus 257 ~~~~v~~~~~~-Gl~V~~WTVn~~~~~~~l~~~GVDgIi 294 (313)
T 3l12_A 257 TPELVAEAHDL-GLIVLTWTVNEPEDIRRMATTGVDGIV 294 (313)
T ss_dssp CHHHHHHHHHT-TCEEEEBCCCSHHHHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHcCCCEEE
Confidence 33456666654 899999999999999999999999996
No 467
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=59.41 E-value=41 Score=30.18 Aligned_cols=42 Identities=14% Similarity=0.035 Sum_probs=30.3
Q ss_pred HHHHHHHHhhcC-CCEEEEe-----c-------CCHHH----HHHHHHcCCCEEEEcCC
Q 039466 205 WKDIEWLRSITN-LPILIKG-----V-------LTRED----AIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 205 W~dl~~lr~~~~-lPiilKG-----I-------~s~eD----A~~a~~~G~dgI~VSNH 246 (263)
-+-++.+|+.++ -||.+|= . .+.++ |+.+.+.|+|.|-||+.
T Consensus 215 ~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~ 273 (364)
T 1vyr_A 215 LEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSET 273 (364)
T ss_dssp HHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHhcCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecC
Confidence 356888999884 3999851 1 14455 67777899999999873
No 468
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=59.30 E-value=15 Score=33.03 Aligned_cols=40 Identities=10% Similarity=0.253 Sum_probs=34.6
Q ss_pred CCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 203 LSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 203 ~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
-+|+.+++|++.+++||..=+ +.+.+|++.+++.| +|.|.
T Consensus 227 ~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ 268 (365)
T 3ik4_A 227 EDWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASVIN 268 (365)
T ss_dssp TCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSEEE
T ss_pred ccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEE
Confidence 478999999999999999987 78999999999865 67654
No 469
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=59.19 E-value=24 Score=29.49 Aligned_cols=42 Identities=14% Similarity=0.014 Sum_probs=31.9
Q ss_pred CCHHHHHHHHhh--cCCCEEEEe-cCCHHHH-HHHHHcCCCEEEEc
Q 039466 203 LSWKDIEWLRSI--TNLPILIKG-VLTREDA-IKAVEVGVAGIIVS 244 (263)
Q Consensus 203 ~~W~dl~~lr~~--~~lPiilKG-I~s~eDA-~~a~~~G~dgI~VS 244 (263)
+..+-++.||+. +++|+.++= |.++++. ..+.++|+|.|-|-
T Consensus 49 ~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~itvH 94 (228)
T 3ovp_A 49 FGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFH 94 (228)
T ss_dssp BCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSEEEEE
T ss_pred cCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCEEEEc
Confidence 355789999998 589988765 6777664 45668999999883
No 470
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=58.54 E-value=53 Score=28.72 Aligned_cols=81 Identities=11% Similarity=0.146 Sum_probs=51.0
Q ss_pred cccceeecccCCcccCCChhHH--HHHHHHHHCCCceeecCCCCccHHHHHHhccc-------cccCHHHHHHHHHHHHH
Q 039466 71 ISASIIIAPTGLHKLANPEGEV--ATARAAASCNTIMVLSFTSSCSIEEVAASCNA-------AYKKRDMAATLVQRAER 141 (263)
Q Consensus 71 ~~~Pi~iaP~~~~~l~~~~ge~--a~AraA~~~gi~~~lss~s~~sieeV~~~~~~-------~~~d~~~~~~li~ra~~ 141 (263)
+.+|+++-+.-+..+. .+.|. ..++.|.++|.=++=-++...++++|.+..+- ...+.+...+.++.|-+
T Consensus 170 ~GlpvIie~~~G~~~~-~d~e~i~~aariA~elGAD~VKt~~t~e~~~~vv~~~~vPVv~~GG~~~~~~~~l~~v~~ai~ 248 (295)
T 3glc_A 170 VGMPTMAVTGVGKDMV-RDQRYFSLATRIAAEMGAQIIKTYYVEKGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAID 248 (295)
T ss_dssp TTCCEEEEECC----C-CSHHHHHHHHHHHHHTTCSEEEEECCTTTHHHHHHTCSSCEEEECCSCCCHHHHHHHHHHHHH
T ss_pred cCCEEEEECCCCCccC-CCHHHHHHHHHHHHHhCCCEEEeCCCHHHHHHHHHhCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3467776431111222 24453 48899999997665444433578999876542 34466677888888889
Q ss_pred cCCCEEEEccC
Q 039466 142 NGFMALVLTAD 152 (263)
Q Consensus 142 aG~~al~vTvD 152 (263)
+|+..+++.-.
T Consensus 249 aGA~Gv~vGRn 259 (295)
T 3glc_A 249 QGASGVDMGRN 259 (295)
T ss_dssp TTCSEEEESHH
T ss_pred hCCeEEEeHHH
Confidence 99998886544
No 471
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=58.49 E-value=14 Score=32.59 Aligned_cols=39 Identities=23% Similarity=0.162 Sum_probs=31.5
Q ss_pred HHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCCEEEEcCC
Q 039466 207 DIEWLRSIT-NLPILIKGVLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 207 dl~~lr~~~-~lPiilKGI~s~eDA~~a~~~G~dgI~VSNH 246 (263)
.++.+|+.. ..||.+ +|-|.|++++|+++|+|.|++=|-
T Consensus 197 Av~~ar~~~p~~kIeV-Ev~tl~e~~eAl~aGaDiImLDn~ 236 (300)
T 3l0g_A 197 AIQRLRKNLKNEYIAI-ECDNISQVEESLSNNVDMILLDNM 236 (300)
T ss_dssp HHHHHHHHSSSCCEEE-EESSHHHHHHHHHTTCSEEEEESC
T ss_pred HHHHHHHhCCCCCEEE-EECCHHHHHHHHHcCCCEEEECCC
Confidence 467777764 367666 799999999999999999988763
No 472
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=58.44 E-value=11 Score=34.13 Aligned_cols=42 Identities=19% Similarity=0.342 Sum_probs=35.9
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|++.+++||..=+ +.+.+|.+++++.| +|.|.+
T Consensus 238 ~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~i 281 (393)
T 1wuf_A 238 TKDFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINL 281 (393)
T ss_dssp SSCSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CcCHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEe
Confidence 3478999999999999999988 78999999999987 677754
No 473
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=58.35 E-value=18 Score=31.83 Aligned_cols=65 Identities=14% Similarity=0.117 Sum_probs=0.0
Q ss_pred HHHHHHHHH---HcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHH
Q 039466 132 AATLVQRAE---RNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDI 208 (263)
Q Consensus 132 ~~~li~ra~---~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl 208 (263)
..+.|+|++ ++|++.|+ .....+-+++
T Consensus 170 ldeai~Ra~ay~~AGAD~if--------------------------------------------------~~~~~~~ee~ 199 (298)
T 3eoo_A 170 IDAAIERAIAYVEAGADMIF--------------------------------------------------PEAMKTLDDY 199 (298)
T ss_dssp HHHHHHHHHHHHHTTCSEEE--------------------------------------------------ECCCCSHHHH
T ss_pred HHHHHHHHHhhHhcCCCEEE--------------------------------------------------eCCCCCHHHH
Q ss_pred HHHHhhcCCCEEEE----ecCCHHHHHHHHHcCCCEEEEcCC
Q 039466 209 EWLRSITNLPILIK----GVLTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 209 ~~lr~~~~lPiilK----GI~s~eDA~~a~~~G~dgI~VSNH 246 (263)
+.+.+.+++|+++. |-.-.-+...+.+.|++-|.+.||
T Consensus 200 ~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~ 241 (298)
T 3eoo_A 200 RRFKEAVKVPILANLTEFGSTPLFTLDELKGANVDIALYCCG 241 (298)
T ss_dssp HHHHHHHCSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSH
T ss_pred HHHHHHcCCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchH
No 474
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=58.17 E-value=19 Score=32.80 Aligned_cols=41 Identities=12% Similarity=0.104 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGII 242 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~ 242 (263)
.-+++.+++|++.+++||.+=+ +.+.+|++.+++.|+-.|+
T Consensus 269 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div 310 (412)
T 4h1z_A 269 TEDIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALAIV 310 (412)
T ss_dssp TTCHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred ccchHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCCEE
Confidence 3478899999999999999877 7899999999998754443
No 475
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=57.68 E-value=12 Score=33.87 Aligned_cols=35 Identities=23% Similarity=0.356 Sum_probs=31.0
Q ss_pred HHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEE
Q 039466 207 DIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGI 241 (263)
Q Consensus 207 dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI 241 (263)
.|-.+.+..++.+|+.||-+.++...+.+.||+.+
T Consensus 384 ~i~~~a~~l~~~viaeGVEt~~~~~~l~~~g~~~~ 418 (430)
T 3pjx_A 384 AIQRAAHSIDLPLIAERVETEGELSVIREMGLYGV 418 (430)
T ss_dssp HHHHHHHTTTCCEEECCCCCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHCCCcEEEEecCCHHHHHHHHHcCCCee
Confidence 45556677899999999999999999999999976
No 476
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=57.63 E-value=9 Score=34.41 Aligned_cols=48 Identities=15% Similarity=0.110 Sum_probs=37.4
Q ss_pred CCCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE--EcCCCC
Q 039466 201 PSLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII--VSNHGA 248 (263)
Q Consensus 201 ~~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~--VSNHGG 248 (263)
+.-+|+.+++|++.+++||..=+ +.+.+|++.+++.| +|.|. ++..||
T Consensus 224 ~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GG 275 (378)
T 4hpn_A 224 VPEQLDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVDILQPDLCGCGG 275 (378)
T ss_dssp CTTCHHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCSEECCBTTTTTH
T ss_pred CccchhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCCEEeeCCeeCCC
Confidence 34478999999999999999877 78999999999976 55542 334454
No 477
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=57.49 E-value=4.8 Score=34.11 Aligned_cols=47 Identities=21% Similarity=0.406 Sum_probs=38.5
Q ss_pred CHHHHHHHHhhcCCCEEEEecCCHHH---------HHHHHHcCCCEEEEcCCCCCCCC
Q 039466 204 SWKDIEWLRSITNLPILIKGVLTRED---------AIKAVEVGVAGIIVSNHGARQLD 252 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKGI~s~eD---------A~~a~~~G~dgI~VSNHGGRqlD 252 (263)
...+|..+++..++||..|- +++.+ +..+.++||++|++ +|-=|.++
T Consensus 44 ~~~~L~~v~~~~~i~v~aQd-v~~~~~Ga~TGeis~~~l~~~Ga~~Vll-ghseRR~~ 99 (226)
T 1w0m_A 44 NHLELGLVSQSVDIPVYAQG-ADVEAGGAHTAHVSLENIKEAGGSGVIL-NHSEAPLK 99 (226)
T ss_dssp CGGGHHHHHTTCSSCBEESC-CSBSSCSSCTTCCBHHHHHHHTCCEEEE-CCTTSCCB
T ss_pred CHHHHHHHHHhcCCceEeeE-CChhhCCCccCCCCHHHHHHcCCCEEEE-eeeeccCC
Confidence 44788899998999999999 67788 89999999998865 67666554
No 478
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=57.40 E-value=11 Score=33.71 Aligned_cols=52 Identities=21% Similarity=0.222 Sum_probs=43.3
Q ss_pred CCCHHHHHHHHhhc--CCCEEEEecCCHHHHHHHHHcCCCEEEEcC--CCCCCCCC
Q 039466 202 SLSWKDIEWLRSIT--NLPILIKGVLTREDAIKAVEVGVAGIIVSN--HGARQLDY 253 (263)
Q Consensus 202 ~~~W~dl~~lr~~~--~lPiilKGI~s~eDA~~a~~~G~dgI~VSN--HGGRqlD~ 253 (263)
+++-++++++++.. +.+|.+-|=.+.+.+...++.|||+|.|+. |..+.+|-
T Consensus 259 n~~~~~l~~av~~l~~~v~ieaSGGIt~~~I~~~a~tGVD~isvGalt~sa~~lD~ 314 (320)
T 3paj_A 259 NFSLEMMREAVKINAGRAALENSGNITLDNLKECAETGVDYISVGALTKHLKALDL 314 (320)
T ss_dssp SCCHHHHHHHHHHHTTSSEEEEESSCCHHHHHHHHTTTCSEEECTHHHHSBCCCCE
T ss_pred CCCHHHHHHHHHHhCCCCeEEEECCCCHHHHHHHHHcCCCEEEECceecCCCccee
Confidence 35678888888765 578999998999999999999999999976 77777764
No 479
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=57.28 E-value=14 Score=33.36 Aligned_cols=42 Identities=17% Similarity=0.178 Sum_probs=35.4
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGIIV 243 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~V 243 (263)
.-+|+.+++|++.+++||..=+ +.+.+|.+++++.| +|.|.+
T Consensus 238 ~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~i 281 (386)
T 1wue_A 238 ADDFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINL 281 (386)
T ss_dssp TTCSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred cccHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEE
Confidence 3478899999999999999977 68999999999876 777654
No 480
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A 4afy_A 4ag0_A
Probab=57.06 E-value=11 Score=31.72 Aligned_cols=34 Identities=9% Similarity=-0.140 Sum_probs=29.6
Q ss_pred HHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEE
Q 039466 208 IEWLRSITNLPILIKGVLTREDAIKAVEVGVAGI 241 (263)
Q Consensus 208 l~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI 241 (263)
+-.+.+..++.+|+.||-+.++...+.+.||+.+
T Consensus 214 ii~~~~~~~~~viaeGVEt~~~~~~l~~lG~~~~ 247 (268)
T 3hv8_A 214 LIAELHEQQKLSIVPFVESASVLATLWQAGATYI 247 (268)
T ss_dssp HHHHHHHTTCEEEECCCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHcCCCEEEEeeCCHHHHHHHHHcCCCEe
Confidence 4445566889999999999999999999999976
No 481
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=57.03 E-value=4.8 Score=35.00 Aligned_cols=51 Identities=22% Similarity=0.240 Sum_probs=39.4
Q ss_pred CCHHHHHHHHhhcC-----CCEEEEecCCHHHHHHHHHcCCCEEEEcC--CCCCCCCC
Q 039466 203 LSWKDIEWLRSITN-----LPILIKGVLTREDAIKAVEVGVAGIIVSN--HGARQLDY 253 (263)
Q Consensus 203 ~~W~dl~~lr~~~~-----lPiilKGI~s~eDA~~a~~~G~dgI~VSN--HGGRqlD~ 253 (263)
++-++++++++..+ +||.+-|=.+++.+...++.|||+|.||. |+...+|.
T Consensus 211 ~~~~~l~~~v~~l~~~~~~~~i~AsGGI~~~ni~~~~~aGaD~i~vGs~i~~a~~~D~ 268 (273)
T 2b7n_A 211 LSVLETKEIAAYRDAHYPFVLLEASGNISLESINAYAKSGVDAISVGALIHQATFIDM 268 (273)
T ss_dssp CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHTTTCSEEECTHHHHTCCCCCE
T ss_pred CCHHHHHHHHHHhhccCCCcEEEEECCCCHHHHHHHHHcCCcEEEEcHHhcCCCCCce
Confidence 45577776665543 88998884499999999999999999987 66666664
No 482
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=56.70 E-value=21 Score=35.32 Aligned_cols=44 Identities=16% Similarity=0.158 Sum_probs=33.7
Q ss_pred HHHHHHHhhc-CCCEEEEec----CCHHHHHHHHHcCCCEEEEc--CCCCC
Q 039466 206 KDIEWLRSIT-NLPILIKGV----LTREDAIKAVEVGVAGIIVS--NHGAR 249 (263)
Q Consensus 206 ~dl~~lr~~~-~lPiilKGI----~s~eDA~~a~~~G~dgI~VS--NHGGR 249 (263)
+-+++|++.+ ++||=+=.= +...-+..|+++||+.|..| +-|||
T Consensus 294 ~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ti~GlGer 344 (718)
T 3bg3_A 294 MLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADSMSGM 344 (718)
T ss_dssp HHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSEEEEBCGGGCST
T ss_pred HHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCEEEecCcccccc
Confidence 4578899998 688754441 67788999999999999954 55776
No 483
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=56.48 E-value=31 Score=31.19 Aligned_cols=41 Identities=5% Similarity=-0.146 Sum_probs=28.1
Q ss_pred HHHHHHHhhcC-CCEEEE----ec-------CCHHHH----HHHHHcCCCEEEEcCC
Q 039466 206 KDIEWLRSITN-LPILIK----GV-------LTREDA----IKAVEVGVAGIIVSNH 246 (263)
Q Consensus 206 ~dl~~lr~~~~-lPiilK----GI-------~s~eDA----~~a~~~G~dgI~VSNH 246 (263)
+-++.+|+.++ -||.+| +. .+.+++ +.+.++|+|.|-||+-
T Consensus 232 eiv~aVr~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~ 288 (379)
T 3aty_A 232 DVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRG 288 (379)
T ss_dssp HHHHHHHHHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECS
T ss_pred HHHHHHHHhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 55788888876 489887 21 234554 3444689999999873
No 484
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=56.17 E-value=52 Score=27.80 Aligned_cols=20 Identities=25% Similarity=0.232 Sum_probs=14.7
Q ss_pred HHHHHHHHcCCCEEEEccCC
Q 039466 134 TLVQRAERNGFMALVLTADT 153 (263)
Q Consensus 134 ~li~ra~~aG~~al~vTvD~ 153 (263)
+.++.+..+|++.+++....
T Consensus 31 ~~~e~a~~~gaD~v~lDlEd 50 (256)
T 1dxe_A 31 ISTEVLGLAGFDWLVLDGEH 50 (256)
T ss_dssp HHHHHHTTSCCSEEEEESSS
T ss_pred HHHHHHHhCCCCEEEEcCCC
Confidence 34566778899998887753
No 485
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=55.77 E-value=6.9 Score=33.33 Aligned_cols=64 Identities=16% Similarity=0.219 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHHH
Q 039466 130 DMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDIE 209 (263)
Q Consensus 130 ~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl~ 209 (263)
+.+.+.++.+.++|+++|.|.+- ++... .+ ..+-++
T Consensus 20 ~~t~~~~~~l~~~GaD~IelG~S------------~g~t~---~~-----------------------------~~~~v~ 55 (234)
T 2f6u_A 20 TNTDEIIKAVADSGTDAVMISGT------------QNVTY---EK-----------------------------ARTLIE 55 (234)
T ss_dssp CCCHHHHHHHHTTTCSEEEECCC------------TTCCH---HH-----------------------------HHHHHH
T ss_pred cccHHHHHHHHHcCCCEEEECCC------------CCCCH---HH-----------------------------HHHHHH
Confidence 44667788889999999999883 11110 00 124577
Q ss_pred HHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEE
Q 039466 210 WLRSITNLPILIKGVLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 210 ~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~V 243 (263)
++|+ +++|+|+=+=.. ..++.|+||++|
T Consensus 56 ~ir~-~~~Pivl~~y~~-----n~i~~gvDg~ii 83 (234)
T 2f6u_A 56 KVSQ-YGLPIVVEPSDP-----SNVVYDVDYLFV 83 (234)
T ss_dssp HHTT-SCCCEEECCSSC-----CCCCCCSSEEEE
T ss_pred HhcC-CCCCEEEecCCc-----chhhcCCCEEEE
Confidence 7888 899999976431 112779999986
No 486
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=55.76 E-value=29 Score=29.73 Aligned_cols=90 Identities=17% Similarity=0.234 Sum_probs=52.2
Q ss_pred ccCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCH
Q 039466 126 YKKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSW 205 (263)
Q Consensus 126 ~~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 205 (263)
+.|.+.+.++++...++|++.|=+.+=. +-| + ..+..+++.-........+.
T Consensus 24 ~P~~~~t~~~~~~l~~~GaD~iElGiPf--------------SDP------------~--aDGpvIq~a~~rAL~~g~~~ 75 (252)
T 3tha_A 24 YPNLQTSEAFLQRLDQSPIDILELGVAY--------------SDP------------I--ADGEIIADAAKIALDQGVDI 75 (252)
T ss_dssp SSCHHHHHHHHHTGGGSSCSEEEEECCC--------------SCC------------C--SCCCHHHHHHHHHHHTTCCH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCC--------------CCC------------C--CCcHHHHHHHHHHHHCCCCH
Confidence 3567888999999999998887655421 111 0 00111222222222233444
Q ss_pred ----HHHHHHHhhcCCCEEEEecCC------HH-HHHHHHHcCCCEEEEcC
Q 039466 206 ----KDIEWLRSITNLPILIKGVLT------RE-DAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 206 ----~dl~~lr~~~~lPiilKGI~s------~e-DA~~a~~~G~dgI~VSN 245 (263)
+-++++|+. .|+++=|=.+ .| =++.|.++|+||++|-.
T Consensus 76 ~~~~~~~~~~r~~--~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipD 124 (252)
T 3tha_A 76 HSVFELLARIKTK--KALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPE 124 (252)
T ss_dssp HHHHHHHHHCCCS--SEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTT
T ss_pred HHHHHHHHHHhcC--CCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCC
Confidence 344555443 7999977422 22 46788899999999754
No 487
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=55.62 E-value=11 Score=30.77 Aligned_cols=35 Identities=23% Similarity=0.184 Sum_probs=27.6
Q ss_pred HHHHHhhcCCCEEEEec--CCHHHHHHHHHcCCCEEEEc
Q 039466 208 IEWLRSITNLPILIKGV--LTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 208 l~~lr~~~~lPiilKGI--~s~eDA~~a~~~G~dgI~VS 244 (263)
+..+++..+. ++.|+ .+++++..+.+.|+|.|.+|
T Consensus 107 ~~~~~~~~g~--~~~~~s~~t~~e~~~a~~~g~d~v~~~ 143 (227)
T 2tps_A 107 AKEVRAAIGD--MILGVSAHTMSEVKQAEEDGADYVGLG 143 (227)
T ss_dssp HHHHHHHHTT--SEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHhcCC--cEEEEecCCHHHHHHHHhCCCCEEEEC
Confidence 5666666665 45565 89999999999999999985
No 488
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=55.05 E-value=5.2 Score=36.89 Aligned_cols=39 Identities=10% Similarity=0.015 Sum_probs=34.4
Q ss_pred CHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 204 SWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|.
T Consensus 261 d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~~ga~d~v~ 301 (422)
T 3tji_A 261 QSAWLEQVRQQSCVPLALGELFNNPAEWHDLIVNRRIDFIR 301 (422)
T ss_dssp GGGGHHHHHHHCCCCEEECTTCCSGGGTHHHHHTTCCSEEC
T ss_pred hHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEe
Confidence 67889999999999999988 78999999999976 67664
No 489
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=54.87 E-value=37 Score=29.69 Aligned_cols=63 Identities=25% Similarity=0.299 Sum_probs=0.0
Q ss_pred HHHHHHHHH---HcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHHHH
Q 039466 132 AATLVQRAE---RNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWKDI 208 (263)
Q Consensus 132 ~~~li~ra~---~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~dl 208 (263)
..+.|+||+ ++|++.|++.--.+ +.+.+
T Consensus 169 ~~~ai~Ra~ay~eAGAd~i~~e~~~~-------------------------------------------------~~~~~ 199 (295)
T 1s2w_A 169 LDEALKRAEAYRNAGADAILMHSKKA-------------------------------------------------DPSDI 199 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCSS-------------------------------------------------SSHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCC-------------------------------------------------CHHHH
Q ss_pred HHHHhhcC--CCEEEEec----CCHHHHHHHHHcCCCEEEEcCC
Q 039466 209 EWLRSITN--LPILIKGV----LTREDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 209 ~~lr~~~~--lPiilKGI----~s~eDA~~a~~~G~dgI~VSNH 246 (263)
+.+.+.++ +|+++.-. .+ ...+.++|+.-|.+.||
T Consensus 200 ~~i~~~~~~~~P~i~~~~~~~~~~---~~eL~~lGv~~v~~~~~ 240 (295)
T 1s2w_A 200 EAFMKAWNNQGPVVIVPTKYYKTP---TDHFRDMGVSMVIWANH 240 (295)
T ss_dssp HHHHHHHTTCSCEEECCSTTTTSC---HHHHHHHTCCEEEECSH
T ss_pred HHHHHHcCCCCCEEEeCCCCCCCC---HHHHHHcCCcEEEEChH
No 490
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=54.87 E-value=99 Score=26.30 Aligned_cols=26 Identities=19% Similarity=-0.075 Sum_probs=19.0
Q ss_pred CChHHHHHHHHHhCCccccccccCCcc
Q 039466 6 VNLNAFQELARLALPKMYYDFYAGGVE 32 (263)
Q Consensus 6 ~~~~d~~~~A~~~l~~~~~~y~~~ga~ 32 (263)
.+.++..+.|++.+...+ ++++=|.+
T Consensus 22 ~~~~~a~~~a~~~v~~GA-diIDIg~g 47 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGA-RALDLNVG 47 (262)
T ss_dssp TCHHHHHHHHHHHHHHTC-SEEEEBCC
T ss_pred CCHHHHHHHHHHHHHCCC-cEEEECCC
Confidence 467788888988886554 88876654
No 491
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=54.72 E-value=14 Score=32.89 Aligned_cols=36 Identities=19% Similarity=0.095 Sum_probs=31.3
Q ss_pred HHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEE
Q 039466 207 DIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGII 242 (263)
Q Consensus 207 dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~ 242 (263)
.|-.+.+..++.+|+.||-|.++...+.+.|||.+-
T Consensus 273 ~ii~la~~lg~~vvAEGVEt~~q~~~L~~lG~d~~Q 308 (340)
T 4hjf_A 273 SVVKLGQDLDLEVVAEGVENAEMAHALQSLGCDYGQ 308 (340)
T ss_dssp HHHHHHHHHTCEEEEECCCSHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHcCCEEEEEeCCcHHHHHHHHHcCCCEee
Confidence 355566778999999999999999999999999763
No 492
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=54.42 E-value=22 Score=31.17 Aligned_cols=33 Identities=12% Similarity=0.175 Sum_probs=25.0
Q ss_pred HHHHHHhhcCCCEEEEec---CCHHHHHHHHHcCCCEEEE
Q 039466 207 DIEWLRSITNLPILIKGV---LTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 207 dl~~lr~~~~lPiilKGI---~s~eDA~~a~~~G~dgI~V 243 (263)
-++.||+.+++|+|+|.. -+.+-. --|+|++.+
T Consensus 87 ~v~~ik~~~~lPvil~fPP~~g~~~~i----~~~aDa~l~ 122 (286)
T 3vk5_A 87 YVAAVKAATPLPVVLHFPPRPGAGFPV----VRGADALLL 122 (286)
T ss_dssp HHHHHHHHCSSCEEEECCCBTTTBSCC----CTTCSEEEE
T ss_pred HHHHHHHhCCCCEEEECCCCCCCcccc----ccCCCEEEE
Confidence 478899999999999887 555222 358888875
No 493
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=54.30 E-value=29 Score=26.31 Aligned_cols=40 Identities=35% Similarity=0.524 Sum_probs=31.9
Q ss_pred CHHHHHHHHhh---cCCCEE-EEecCCHHHHHHHHHcCCCEEEE
Q 039466 204 SWKDIEWLRSI---TNLPIL-IKGVLTREDAIKAVEVGVAGIIV 243 (263)
Q Consensus 204 ~W~dl~~lr~~---~~lPii-lKGI~s~eDA~~a~~~G~dgI~V 243 (263)
.++-+++||+. -++||| +-+-.+.++..++.++|+++.++
T Consensus 72 G~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl~ 115 (134)
T 3to5_A 72 GIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYIV 115 (134)
T ss_dssp HHHHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHHHCCCCEEEE
Confidence 36778999864 357866 56678899999999999999864
No 494
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=54.15 E-value=21 Score=30.80 Aligned_cols=78 Identities=13% Similarity=0.046 Sum_probs=52.6
Q ss_pred cCHHHHHHHHHHHHHcCCCEEEEccCCCCCcchHHHHhhhhhhhhhhhhhhccccCCCCCCCccHHHHHHHhcCCCCCHH
Q 039466 127 KKRDMAATLVQRAERNGFMALVLTADTPRLDRREADIKNKMIAQQLKNLEGLLSTKVTSDTGSNLEAYAKETMDPSLSWK 206 (263)
Q Consensus 127 ~d~~~~~~li~ra~~aG~~al~vTvD~~~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 206 (263)
-+.+...++++++.++|+..|-++- ++.++ + +| +. .-.|+
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~--~~~~~--------~-~p---------------------------~~--~~~~e 62 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATS--FVSPK--------W-VP---------------------------QL--ADSRE 62 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEE--CSCTT--------T-CG---------------------------GG--TTHHH
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEcc--CcCcc--------c-cc---------------------------cc--cCHHH
Confidence 3556677889999999999988862 21100 0 01 01 12466
Q ss_pred HHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCCEEEEcC
Q 039466 207 DIEWLRSITNLPILIKGVLTREDAIKAVEVGVAGIIVSN 245 (263)
Q Consensus 207 dl~~lr~~~~lPiilKGI~s~eDA~~a~~~G~dgI~VSN 245 (263)
-++.+++.-+.|+.+= +.+.+++++|+++|++.|.|+.
T Consensus 63 ~~~~i~~~~~~~v~~l-~~n~~~i~~a~~~G~~~V~i~~ 100 (295)
T 1ydn_A 63 VMAGIRRADGVRYSVL-VPNMKGYEAAAAAHADEIAVFI 100 (295)
T ss_dssp HHHHSCCCSSSEEEEE-CSSHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHhCCCCEEEEE-eCCHHHHHHHHHCCCCEEEEEE
Confidence 6777766556676433 3789999999999999998873
No 495
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=54.03 E-value=22 Score=30.47 Aligned_cols=43 Identities=16% Similarity=0.217 Sum_probs=31.0
Q ss_pred CHHHHHHHHhhcCCCEEEEecCCH----HHHHHHHHcCCCEEEEcCC
Q 039466 204 SWKDIEWLRSITNLPILIKGVLTR----EDAIKAVEVGVAGIIVSNH 246 (263)
Q Consensus 204 ~W~dl~~lr~~~~lPiilKGI~s~----eDA~~a~~~G~dgI~VSNH 246 (263)
+-+.++.|.+.+++|+.+-..-.. -+...+.++|++-|.+.||
T Consensus 192 ~~~~~~~i~~~~~~P~n~~~~~~~~~p~~~~~eL~~lGv~~v~~~~~ 238 (255)
T 2qiw_A 192 TAEQVERLVDAVSVPVNITAHPVDGHGAGDLATLAGLGVRRVTFGPL 238 (255)
T ss_dssp SHHHHHHHHTTCSSCBEEECBTTTBBTTBCHHHHHHTTCCEEECTTH
T ss_pred CHHHHHHHHHhCCCCEEEEecCCCCCCCCCHHHHHHcCCCEEEEHHH
Confidence 456788899999999877643111 2355677899999988887
No 496
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=53.98 E-value=58 Score=28.93 Aligned_cols=83 Identities=12% Similarity=0.136 Sum_probs=47.3
Q ss_pred cccceeecccCCcccCCChhHHHHHHHHHHCCCc--eeecCCCCccHHHHHH---hccc---c--ccCHHHHHHHHHHHH
Q 039466 71 ISASIIIAPTGLHKLANPEGEVATARAAASCNTI--MVLSFTSSCSIEEVAA---SCNA---A--YKKRDMAATLVQRAE 140 (263)
Q Consensus 71 ~~~Pi~iaP~~~~~l~~~~ge~a~AraA~~~gi~--~~lss~s~~sieeV~~---~~~~---~--~~d~~~~~~li~ra~ 140 (263)
+..|+.|--+| ++.-...++++|-++|.. -.+.+.+...++++.. .... + ..|-+...++++++.
T Consensus 128 ~~vPlsIDg~~-----~~T~~~eV~eaAleagag~~~lINsv~~~~~~~m~~laa~~g~~vVlmh~~d~~~~~~l~~~a~ 202 (323)
T 4djd_D 128 VGVPLVVVGCG-----DVEKDHEVLEAVAEAAAGENLLLGNAEQENYKSLTAACMVHKHNIIARSPLDINICKQLNILIN 202 (323)
T ss_dssp CCSCEEEECCS-----CHHHHHHHHHHHHHHTTTSCCEEEEEBTTBCHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHH
T ss_pred CCceEEEECCC-----CCCCCHHHHHHHHHhcCCCCCeEEECCcccHHHHHHHHHHhCCeEEEEccchHHHHHHHHHHHH
Confidence 46777775332 455666777777776622 2333333333444433 2221 2 236677888888999
Q ss_pred HcCC--CEEEEccCCCCCcc
Q 039466 141 RNGF--MALVLTADTPRLDR 158 (263)
Q Consensus 141 ~aG~--~al~vTvD~~~~g~ 158 (263)
++|+ +-|++.--.-.+|+
T Consensus 203 ~~GI~~e~IIlDPg~g~fgk 222 (323)
T 4djd_D 203 EMNLPLDHIVIDPSIGGLGY 222 (323)
T ss_dssp TTTCCGGGEEEECCCCCTTT
T ss_pred HcCCCHHHEEEeCCCccccC
Confidence 9998 55776554433344
No 497
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=53.64 E-value=95 Score=26.64 Aligned_cols=24 Identities=21% Similarity=0.117 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHcCCCEEEEccCC
Q 039466 130 DMAATLVQRAERNGFMALVLTADT 153 (263)
Q Consensus 130 ~~~~~li~ra~~aG~~al~vTvD~ 153 (263)
+.+.+-|+.++++|++.+|+.+=+
T Consensus 73 ~~M~~Di~~~~~~GadGvV~G~Lt 96 (256)
T 1twd_A 73 AAILEDVRTVRELGFPGLVTGVLD 96 (256)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCBC
T ss_pred HHHHHHHHHHHHcCCCEEEEeeEC
Confidence 346777888999999999987654
No 498
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=53.51 E-value=33 Score=24.91 Aligned_cols=40 Identities=18% Similarity=0.395 Sum_probs=31.8
Q ss_pred HHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCCEEEEc
Q 039466 205 WKDIEWLRSITNLPILIKG-VLTREDAIKAVEVGVAGIIVS 244 (263)
Q Consensus 205 W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G~dgI~VS 244 (263)
++-+++|++....|||+=. -.+.+.+..+.+.|+++++.-
T Consensus 64 ~~l~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~K 104 (136)
T 2qzj_A 64 WTLCKKIRNVTTCPIVYMTYINEDQSILNALNSGGDDYLIK 104 (136)
T ss_dssp HHHHHHHHTTCCCCEEEEESCCCHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHccCCCCCEEEEEcCCCHHHHHHHHHcCCcEEEEC
Confidence 5668888877688887654 567889999999999998753
No 499
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=52.84 E-value=23 Score=31.13 Aligned_cols=43 Identities=16% Similarity=0.094 Sum_probs=32.2
Q ss_pred HHHHHHHhhc-CCCEEEEec----CCHHHHHHHHHcCCCEEEEc--CCCC
Q 039466 206 KDIEWLRSIT-NLPILIKGV----LTREDAIKAVEVGVAGIIVS--NHGA 248 (263)
Q Consensus 206 ~dl~~lr~~~-~lPiilKGI----~s~eDA~~a~~~G~dgI~VS--NHGG 248 (263)
+-+++|++.+ ++||-+=+= +...-+..|+++||+-|..| +-||
T Consensus 190 ~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd~tv~GlGe 239 (307)
T 1ydo_A 190 TVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGG 239 (307)
T ss_dssp HHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCEEEEBGGGCCE
T ss_pred HHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEEcccccCC
Confidence 4578888888 477755541 67788999999999999865 4455
No 500
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=52.80 E-value=6.6 Score=36.25 Aligned_cols=41 Identities=17% Similarity=0.077 Sum_probs=35.2
Q ss_pred CCCHHHHHHHHhhcCCCEEEEe-cCCHHHHHHHHHcC-CCEEE
Q 039466 202 SLSWKDIEWLRSITNLPILIKG-VLTREDAIKAVEVG-VAGII 242 (263)
Q Consensus 202 ~~~W~dl~~lr~~~~lPiilKG-I~s~eDA~~a~~~G-~dgI~ 242 (263)
.-+|+.+++|++.+++||+.=+ +.+++|++.+++.| +|.|.
T Consensus 265 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~ 307 (426)
T 4e4f_A 265 AENQACFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIR 307 (426)
T ss_dssp CSSGGGGHHHHTTCCSCEEECTTCCSGGGTHHHHHTTCCSEEC
T ss_pred hHHHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEE
Confidence 3468889999999999999998 78999999999976 66653
Done!