Your job contains 1 sequence.
>039467
EDWQKEKRDFLRSLSRISTLPKTNMTDTSTGGTLPGQMASMASSPQISSGPSGMELVPLA
NKPLLEKKATVYAEVVKNLNNARQQGLPFKPATAFKGAYESLAIESSSGKSVNIQKIWHL
LQTMMGEHATVQQTASRKMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRV
RAFLRIRLRDYGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFA
PLLTEWINTGGMVPPEIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDR
LLRDLPTLFSTIEDFLWFKLSAIRDVPSEAPSVVLSDGLAPYSLDDLQVYLNKFDPSYYT
KNGKDPLVYPYVLLLSIQLLPAVLYLSKESGDEGYNIDAAHISIVLADHGMALEYYAQAA
AAVGGGQLSWTGRANVDQQRQKSLMLKQLLTELLLRDGGIYLLLGSRGAGEEGELGRYIT
DLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLSEAIFAMSRGRLDG
ESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILSVHKMARSGHYLDA
LREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCLDNVTDTDGSLRAMR
AKIANFLANNMNQNWPRDLYERVARSL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039467
(687 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062693 - symbol:AT2G41620 species:3702 "Arabi... 1560 9.2e-257 2
POMBASE|SPCC1620.11 - symbol:nup97 "nucleoporin Nic96 hom... 195 5.4e-14 2
CGD|CAL0004316 - symbol:orf19.2002 species:5476 "Candida ... 163 7.6e-09 2
UNIPROTKB|G0ZGU3 - symbol:NIC96 "Nic96p" species:285224 "... 165 1.2e-08 3
ASPGD|ASPL0000069114 - symbol:nic96 species:162425 "Emeri... 152 1.8e-08 3
SGD|S000001898 - symbol:NIC96 "Linker nucleoporin compone... 102 2.0e-08 3
UNIPROTKB|F1NEI9 - symbol:NUP93 "Uncharacterized protein"... 145 1.0e-07 2
UNIPROTKB|G4N675 - symbol:MGG_08590 "Nucleoporin NIC96" s... 131 1.2e-07 3
ZFIN|ZDB-GENE-990415-46 - symbol:nup93 "nucleoporin 93" s... 130 1.0e-06 2
MGI|MGI:1919055 - symbol:Nup93 "nucleoporin 93" species:1... 137 1.2e-06 2
RGD|1311525 - symbol:Nup93 "nucleoporin 93" species:10116... 137 1.2e-06 2
UNIPROTKB|F1NAQ5 - symbol:NUP93 "Uncharacterized protein"... 145 1.3e-06 1
UNIPROTKB|Q8N1F7 - symbol:NUP93 "Nuclear pore complex pro... 132 3.2e-06 2
UNIPROTKB|Q5R822 - symbol:NUP93 "Nuclear pore complex pro... 132 3.2e-06 2
UNIPROTKB|H3BVG0 - symbol:NUP93 "Nuclear pore complex pro... 132 3.8e-06 2
UNIPROTKB|I3LBE6 - symbol:NUP93 "Uncharacterized protein"... 131 4.3e-06 2
UNIPROTKB|E2RSV7 - symbol:NUP93 "Uncharacterized protein"... 134 5.3e-06 2
UNIPROTKB|H3BPA9 - symbol:NUP93 "Nuclear pore complex pro... 132 5.5e-06 1
UNIPROTKB|A5PJZ5 - symbol:NUP93 "Nuclear pore complex pro... 131 6.5e-06 2
FB|FBgn0027537 - symbol:Nup93-1 "Nucleoporin 93kD-1" spec... 129 6.8e-06 2
UNIPROTKB|Q7ZX96 - symbol:nup93 "Nuclear pore complex pro... 136 1.2e-05 3
UNIPROTKB|Q6NX12 - symbol:nup93 "Nuclear pore complex pro... 132 1.6e-05 3
>TAIR|locus:2062693 [details] [associations]
symbol:AT2G41620 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006810 "transport"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0006310
"DNA recombination" evidence=RCA] [GO:0006406 "mRNA export from
nucleus" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007126 "meiosis" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010332 "response to
gamma radiation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0032204
"regulation of telomere maintenance" evidence=RCA] [GO:0043247
"telomere maintenance in response to DNA damage" evidence=RCA]
[GO:0045132 "meiotic chromosome segregation" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] InterPro:IPR007231
Pfam:PF04097 GO:GO:0009506 GO:GO:0005635 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006810 GO:GO:0005643
EMBL:AC002510 eggNOG:NOG312233 KO:K14309 PANTHER:PTHR11225
OMA:FNDYMMK EMBL:AY034907 EMBL:AY113905 IPI:IPI00539564 PIR:T00818
RefSeq:NP_565951.1 UniGene:At.19154 UniGene:At.42807
ProteinModelPortal:O22224 IntAct:O22224 STRING:O22224 PaxDb:O22224
PRIDE:O22224 EnsemblPlants:AT2G41620.1 GeneID:818760
KEGG:ath:AT2G41620 TAIR:At2g41620 HOGENOM:HOG000006112
InParanoid:O22224 PhylomeDB:O22224 ProtClustDB:CLSN2688869
Genevestigator:O22224 GermOnline:AT2G41620 Uniprot:O22224
Length = 861
Score = 1560 (554.2 bits), Expect = 9.2e-257, Sum P(2) = 9.2e-257
Identities = 300/414 (72%), Positives = 346/414 (83%)
Query: 1 EDWQKEKRDFLRSLSRISTLPKTNMTDTSTGGTLPGQMASMASSPQISSGPSGMELVPLA 60
EDW+KEKRDFL+SLSRIS LPKTNM DTS GQ+ + SSP++SS P G ELV LA
Sbjct: 138 EDWRKEKRDFLQSLSRISMLPKTNMIDTSREAHA-GQLVPVGSSPRVSSTP-GKELVALA 195
Query: 61 NKPLLEKKATVYAEVVKNLNNARQQGLPFKPATAFKGAYESLAIESSSGKSVNIQKIWHL 120
N P+ EKKA VY EVVK LN +R++G+PF+PA FK AY++L E + GKSVN+QKIW L
Sbjct: 196 NIPIHEKKAYVYGEVVKKLNTSRERGMPFRPAMCFKDAYDTLGAEVTRGKSVNMQKIWQL 255
Query: 121 LQTMMGEHATVQQTASRKMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRV 180
+Q + GE + V+Q S++M+L IGAR HL+ GHEK+IMDTIQ+HP QAALGG VGNLQR+
Sbjct: 256 VQAITGEDSAVRQGVSKRMALAIGARHHLQHGHEKFIMDTIQTHPTQAALGGSVGNLQRI 315
Query: 181 RAFLRIRLRDYGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFA 240
RAFLRIRLRDYGVLDFD D RRQPPVDTTWQQIYFCLRTGYY+EAR +A S+R+S QFA
Sbjct: 316 RAFLRIRLRDYGVLDFDSTDARRQPPVDTTWQQIYFCLRTGYYEEAREIARSTRSSQQFA 375
Query: 241 PLLTEWINTGGMVPPEIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDR 300
PLLTEWI T GMV E AA ASEEC+KMLRMGDR+GR AYDKKKLLLY IISGSRRQI+R
Sbjct: 376 PLLTEWITTDGMVAAESAAIASEECEKMLRMGDRLGRTAYDKKKLLLYTIISGSRRQIER 435
Query: 301 LLRDLPTLFSTIEDFLWFKLSAIRDVPSEAPSVVLSDGLAPYSLDDLQVYLNKFDPSYYT 360
+LRDL TLF+TIEDFLWFKLS IRDV + SVVL+DGLAPYSLDDLQ YLNKF+PSYYT
Sbjct: 436 ILRDLSTLFNTIEDFLWFKLSCIRDVTGGSSSVVLNDGLAPYSLDDLQAYLNKFEPSYYT 495
Query: 361 KNGKDPLVYPYVLLLSIQLLPAVLYLSKESGDEGYNIDAAHISIVLADHGMALE 414
KNGKDPLVYPYVLLLS+QLLPA+++LSKE+GD GYNIDA HI+I L DH + E
Sbjct: 496 KNGKDPLVYPYVLLLSVQLLPAIMHLSKEAGDGGYNIDAVHIAISLVDHSVLSE 549
Score = 935 (334.2 bits), Expect = 9.2e-257, Sum P(2) = 9.2e-257
Identities = 181/281 (64%), Positives = 220/281 (78%)
Query: 409 HG---MALEYYXXXXXXXXXXXLSWTGRANVDQQRQKSXXXXXXXXXXXXXXXXXXXXXX 465
HG M +EYY L+W+GR+NVDQQRQ++
Sbjct: 580 HGDLQMTVEYYAQAAATVGGGQLAWSGRSNVDQQRQRNLMLKQLLTEILLRERGIYFLLG 639
Query: 466 SRGAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKC 525
+RG+GEEG+LGR+ D + RQQFL+EAA QCQEAGLYDKSIELQKRVGAFS AL+TINKC
Sbjct: 640 ARGSGEEGQLGRFFPDSRLRQQFLVEAAHQCQEAGLYDKSIELQKRVGAFSAALETINKC 699
Query: 526 LSEAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAI 585
LSEAI +++RGRLDGES+T+ LI +GN+ILE KYYPEVSL ERE+V+EQ+T+LR+LEAI
Sbjct: 700 LSEAICSLARGRLDGESRTSGLILAGNDILETYKYYPEVSLQERERVMEQETILRELEAI 759
Query: 586 LSVHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTC 645
LS+HK+ R G++LDALRE+AKLPFL DPR+PDA DVFQS SP+ Q CVPDLL+VALTC
Sbjct: 760 LSIHKLGRLGNHLDALREIAKLPFLHLDPRMPDATADVFQSASPYFQTCVPDLLKVALTC 819
Query: 646 LDNVTDTDGSLRAMRAKIANFLANNMNQNWPRDLYERVARS 686
LDNV DTDGS+RAMR+KIA FLA+N ++NWPRDLYE+VARS
Sbjct: 820 LDNVPDTDGSIRAMRSKIAGFLASNTHRNWPRDLYEKVARS 860
>POMBASE|SPCC1620.11 [details] [associations]
symbol:nup97 "nucleoporin Nic96 homolog" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=ISO;IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISO] [GO:0016973 "poly(A)+ mRNA export from nucleus"
evidence=IGI;IMP] InterPro:IPR007231 Pfam:PF04097
PomBase:SPCC1620.11 GO:GO:0005829 GO:GO:0007126 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0005643 GO:GO:0016973 PIR:T41041
RefSeq:NP_588469.1 ProteinModelPortal:O94418 STRING:O94418
EnsemblFungi:SPCC1620.11.1 GeneID:2538861 KEGG:spo:SPCC1620.11
eggNOG:NOG312233 KO:K14309 OMA:TEWITTG OrthoDB:EOG4PP1RD
NextBio:20800042 PANTHER:PTHR11225 Uniprot:O94418
Length = 851
Score = 195 (73.7 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 70/274 (25%), Positives = 130/274 (47%)
Query: 145 ARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLRDYGV-LDFDIGDTRR 203
+R+ LE + + I P A +GGV ++RA+L IRL GV ++ D+ + +
Sbjct: 264 SRKFLEAQFFEVLNKEIAKTPQAALVGGVPSIRNKIRAYLNIRLLRNGVWINPDL-EIIQ 322
Query: 204 QPPVDTTWQQIYFCLRTGYYDEA-----RNVALSSRASNQFAPLLTEWINT-GGMVPPEI 257
P+ W I++ LR G+ EA N L + + +F + + G++P ++
Sbjct: 323 DVPI---WAFIFYLLRCGFLKEAVDFTEENRDLFEKVAEKFPFYINAYAKAPNGILPRQL 379
Query: 258 AAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDFLW 317
+ E ++ +R+ + + D K +Y II + D P++ S ED++W
Sbjct: 380 RSQLFSEFNQTIRLQE-----SSDPYKYAVYKIIG----RCDLSKTSCPSICSVTEDYIW 430
Query: 318 FKLSAIRDVPSEAPSVVLSDGLAPYSLDDLQVYLNKFDPSYYTKNGKDPLVYPYVLLLSI 377
F+L R+ + SV + +SL+D+Q L + Y+T NG +P++Y ++L+L
Sbjct: 431 FQLILSREFTEK--SVSAHEF---FSLEDVQHILLSYGSDYFTNNGSNPVMYFFLLMLCG 485
Query: 378 QLLPAVLYLSKESGDEGYNIDAAHISIVLADHGM 411
A+ +L + DA H +I A +G+
Sbjct: 486 LYERAINFLYPY-----FPTDAVHFAITCAYYGL 514
Score = 71 (30.1 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 43/182 (23%), Positives = 72/182 (39%)
Query: 467 RGAGEEG----ELGRYITDLKARQQFL----LEAAGQCQEAGLYDKSIELQKRVGAFSMA 518
RG GE E R + L + +++L L AA Q + GL +I L + A
Sbjct: 605 RGDGERTPSFLENHRSLIGLSSVKEYLSKITLTAAKQADDQGLLSDAILLYHLAEDYDAA 664
Query: 519 LDTINKCLSEAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTV 578
+ IN+ L A+ LD LI ++++ P SL+ + ++T
Sbjct: 665 VTVINRRLGSALLRF----LDQFVFPDKLISLTKSMMDVYNRNP--SLYAKVDYKNRETT 718
Query: 579 LRQLEAILSVHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDL 638
L + + + Y AL + +L LP DP D V + L+ + +L
Sbjct: 719 NLLLLTVEAFNAYTNKD-YEQALSSLQQLEILPLDPLDSDCETFVVRKLAKEFRFLNENL 777
Query: 639 LR 640
L+
Sbjct: 778 LQ 779
>CGD|CAL0004316 [details] [associations]
symbol:orf19.2002 species:5476 "Candida albicans" [GO:0044612
"nuclear pore linkers" evidence=IEA] [GO:0044615 "nuclear pore
nuclear basket" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0016973 "poly(A)+ mRNA export from nucleus"
evidence=IEA] [GO:0006999 "nuclear pore organization" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0017056
"structural constituent of nuclear pore" evidence=IEA]
InterPro:IPR007231 Pfam:PF04097 CGD:CAL0004316 GO:GO:0006810
GO:GO:0005643 EMBL:AACQ01000031 eggNOG:NOG312233 KO:K14309
PANTHER:PTHR11225 RefSeq:XP_719452.1 ProteinModelPortal:Q5AD65
STRING:Q5AD65 GeneID:3638856 KEGG:cal:CaO19.2002 Uniprot:Q5AD65
Length = 960
Score = 163 (62.4 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 100/430 (23%), Positives = 186/430 (43%)
Query: 2 DWQKEKRDFLRSLSRISTLPKTNMTDTSTGGTLPGQMASMASSPQISSGPSGMELVPLAN 61
DW K +RD LR + T K N + + ++ + S AS+ S +
Sbjct: 207 DW-KVRRDELRKAVGLKTNTKFN--EETLKNSIIWKSNSAASNILTPLNTSSSSI----- 258
Query: 62 KPLLEKKATVYAEVVKNLNNARQQGLPFKPATAFKGAYESLAIESSSGKSVNIQKIWHLL 121
+ + +K A+++ +LN AR Q F F E +++ K+ I +IW +L
Sbjct: 259 RQISREKFENQAKIIYSLNEARLQNKSFPLCLNFN---EVNKLQNDI-KAKQIAEIWKIL 314
Query: 122 QTMMGEHA--TVQQ-----TASRKMSLVI--GARRHLEWGHEKYIMDTIQSHPAQAALGG 172
++ GE T Q+ T ++ +I + +L+ YI + +
Sbjct: 315 ISLTGEKTAKTSQEQKFFNTTKADLNAIIVTNSITYLQQEFFNYIDELYLKDGDKPQSFA 374
Query: 173 VVGNLQRVRAFL-RIRLRDYGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVAL 231
N+ +V F+ +I L++ D D+ + W I++ +R G Y EA +
Sbjct: 375 PPTNINKVSYFVHQIVLKN----DPDLINKTLLVNGTPIWVLIFYLIRAGLYLEADELVQ 430
Query: 232 SSRAS-NQFA---PLLTE-WI-NTGGMVPPEIAAAASEECDKMLR--MGDRVGRAAYDKK 283
+R N+F P+ + ++ NT ++P ++ +E ++ + + D YD
Sbjct: 431 RNREQFNKFDKNFPVYVKSYVENTNHVLPSDLNERLHKEFNQQFQFIINDVDNNVNYDPY 490
Query: 284 KLLLYAIISGSRRQIDRLLRDLPTLFS-TIEDFLWFKLSAIR-DVPSEAPSVVLSDGLAP 341
K +Y I + D + LP + +IED+ WF LS I + P +++ +
Sbjct: 491 KYSVYKTIG----KCDLSNKSLPRSVNLSIEDWTWFHLSIINANQPGSESNLIFEN---- 542
Query: 342 YSLDDLQVYLNKFDPSYYTKNGKDPLVYPYVLLLSIQLLPAVLYLSKESGDEGYNIDAAH 401
Y+L DLQ + + P + + +PL ++L + + AV Y S E +E DA H
Sbjct: 543 YTLSDLQNKIIQLGPKNFMSSPNNPLYLKTLILTGLYEM-AVQY-SYEYVNES---DAVH 597
Query: 402 ISIVLADHGM 411
++I LA +G+
Sbjct: 598 LAIGLAYYGL 607
Score = 56 (24.8 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 486 QQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLSEAI 530
QQ + AA +CQE G ++ L + + + INK L+E +
Sbjct: 721 QQIIEVAANKCQEEGRIFDALLLYQLCCDYDTVVSLINKLLAEIL 765
>UNIPROTKB|G0ZGU3 [details] [associations]
symbol:NIC96 "Nic96p" species:285224 "Chaetomium
thermophilum var. thermophilum" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR007231 Pfam:PF04097 GO:GO:0006810
GO:GO:0005643 PANTHER:PTHR11225 EMBL:JF276284 IntAct:G0ZGU3
Uniprot:G0ZGU3
Length = 1112
Score = 165 (63.1 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 94/426 (22%), Positives = 172/426 (40%)
Query: 12 RSLSRISTLPKTNMTDTSTGG-TLPGQMASMASSPQISSGPSGMELVPLANKPLLEKKAT 70
R R+S L ++ M + G T G A S + SG + + ++ L EK+A
Sbjct: 342 RPAQRMSILGRSTMMRSVIGTPTRIGAHAPEFSDVEARKDSSGAAVASVDDRFLREKQAK 401
Query: 71 VYAEVVKNLNNARQQGLPFK-----------------P--ATAFKGAYESLAIESSSGKS 111
+ AE ++ N+ARQ+G PF P A++ E + +G++
Sbjct: 402 L-AEKIREFNDARQRGTPFYICRDLADLESKSGDRHGPHIVEAYRAVMEMVGEHPDAGEA 460
Query: 112 VNIQKIWHLLQTMMGEHATVQQTASRKMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALG 171
++ + + A A RK L GA LE + I +P A LG
Sbjct: 461 PRERQFAKMYLDPNTQSANA--LAMRKQILK-GATTFLEKQFWNEVNSLIAKYPQDANLG 517
Query: 172 GVVGNLQRVRAFLRIRLRDYGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVAL 231
G+ + +++A++R+R+ ++ ++ +Q + W +++ LR G+ EA
Sbjct: 518 GLPDVVSKIKAYIRLRIARKTLVPDNV--ELQQINGEYVWAIVFYLLRAGFVTEAAQYVN 575
Query: 232 SSRAS-NQFAPLLTEWINT-GGMVPPEIAAAASEECDKMLRMGDRVGRA---AYDKKKLL 286
S++A + +IN+ + + C M R+ A + D ++
Sbjct: 576 SNQAHFRAIDRTFSGYINSYASSEERRLKRQMQDRC--MSEYNQRIRNAPEGSIDPFRMA 633
Query: 287 LYAIISGSRRQIDRLLRDLPTLFSTIEDFLWFKLSAIRDVPSEAPSVVLSDGLAPYSLDD 346
Y II + D R L L + + D++W + + R+ S GLA
Sbjct: 634 CYKIIG----RCDLSNRSLDGLQTDVNDWIWLQFNLARETDRSLELAGESYGLAELQASI 689
Query: 347 LQVYLNKFDPSYYTK-NGKDPLVYPYVLLLSIQLLPAVLYLSKESGDEGYNIDAAHISIV 405
++ L F + NG + + Y+ +L+ A+ YL S Y +DA H +I
Sbjct: 690 REIGLKHFPKTAAEDTNGSFGMFF-YLQILAGMFEQAIAYLYPFS----Y-VDAVHFAIA 743
Query: 406 LADHGM 411
L +G+
Sbjct: 744 LTYYGL 749
Score = 61 (26.5 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 27/99 (27%), Positives = 40/99 (40%)
Query: 577 TVLRQLEAILSVHKMARSGHYLDALREVAKLPFLPF-DPRVPDAMVDVFQSLSPHVQACV 635
+VL Q+ I S+ + R LD +R + LP DP + F SL+ V V
Sbjct: 984 SVLLQMADIKSLVEQGRWAECLDKIRALDILPLTARGDPGTIRSYAARFPSLAQPVAINV 1043
Query: 636 PDLLR-VALTCLDNVTDTDGSLRAMRAKIANFLANNMNQ 673
P+LL L C+ G A A + + + Q
Sbjct: 1044 PNLLMWTVLCCMRQRERLAGGQFAGNESTARLMMDELKQ 1082
Score = 37 (18.1 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 490 LEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLSEAI 530
L+AA + G ++ L + + +++ LSEAI
Sbjct: 872 LQAASFADDNGRTTDAVLLYHLAEDYDTVVSIVSRALSEAI 912
>ASPGD|ASPL0000069114 [details] [associations]
symbol:nic96 species:162425 "Emericella nidulans"
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0016973 "poly(A)+ mRNA export from nucleus"
evidence=IEA] [GO:0006999 "nuclear pore organization" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0044612
"nuclear pore linkers" evidence=IEA] [GO:0044615 "nuclear pore
nuclear basket" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0017056 "structural constituent of nuclear pore" evidence=IEA]
InterPro:IPR007231 Pfam:PF04097 GO:GO:0006810 GO:GO:0005643
EMBL:BN001304 EMBL:AACD01000117 eggNOG:NOG312233 KO:K14309
OrthoDB:EOG4PP1RD PANTHER:PTHR11225 RefSeq:XP_664584.1
ProteinModelPortal:Q5AXK0 STRING:Q5AXK0
EnsemblFungi:CADANIAT00000501 GeneID:2870182 KEGG:ani:AN6980.2
HOGENOM:HOG000170229 OMA:RMACYKI Uniprot:Q5AXK0
Length = 1048
Score = 152 (58.6 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 76/300 (25%), Positives = 128/300 (42%)
Query: 121 LQTMMGEHATVQQTASRKMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRV 180
++ + E QQ + + +V G+R+ LE I I +P +A LGG+ + +V
Sbjct: 404 MEEYLDEAPKSQQAINLRKRVVEGSRKFLENSFYTEIEGAIAKNPREAQLGGIPTVINKV 463
Query: 181 RAFLRIR--LRDYGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARN-VALSS--RA 235
RA++R+R RD L D G + D W I++ LR G+ EA VA R+
Sbjct: 464 RAYIRLRESRRD---LAPD-GTELQMVGDDYCWILIFYLLRCGFITEAAEYVARDPGFRS 519
Query: 236 -SNQFAPLLTEWINTGGMVPPEIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGS 294
++F +T + + P ++ + E + R D ++ Y II
Sbjct: 520 LDHKFVTYMTTYAQNKRL-PRDMQQRINGEYQQRSR---NAPDNTIDPYRMACYKIIG-- 573
Query: 295 RRQIDRLLRDLPTLFSTIEDFLWFKLSAIRDVPSEAPSVVLSDGLAPYSLDDLQVYLNKF 354
R + R R L + ++ED++W + S R+ A V G + L+D+Q + +
Sbjct: 574 RCDLGR--RRLDGINQSVEDWMWLQFSLARE-DDRAEEVA---GEV-FGLEDIQTDITEI 626
Query: 355 DPSYYTKNGKDPLVYPYVLLLSI---QLLPAVLYLSKESGDEGYNIDAAHISIVLADHGM 411
+ K + P Y LL I AV YL + + A H +I LA +G+
Sbjct: 627 GQRVFGKGQEGPGGYGTFFLLQILGGMFEQAVSYLGSYAP-----VSAVHFAIALAYYGL 681
Score = 59 (25.8 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 33/128 (25%), Positives = 58/128 (45%)
Query: 14 LSRISTLPKTNMTDTSTGGTLPGQMAS---MASSP-QISSGPSGMELVPLANKPLLEKKA 69
+SR S ++ + S GT PG S + P + + GP+ L + L +K
Sbjct: 278 VSRRSVFGRSGF-EKSVIGT-PGTGKSSHQLFDDPMERTDGPNTQSL----DLRFLREKM 331
Query: 70 TVYAEVVKNLNNARQQGLPFKPATAFKGAYESLAIESSSGKSV--NIQKIWHLLQTMMGE 127
YA+ V++LN+AR Q A +F +E +E +G V + + L ++GE
Sbjct: 332 GYYADKVQSLNSARLQ------ARSFPIFHEFSEVEKHAGGDVPHQLYDAYRALINIVGE 385
Query: 128 HATVQQTA 135
A ++ +
Sbjct: 386 SADIRDVS 393
Score = 50 (22.7 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 490 LEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLSEAI 530
++AA ++ GL S+ L + +D IN+ LS+++
Sbjct: 804 VQAAVVAEDKGLITDSVLLYHLAEDYDRVIDIINRTLSDSV 844
Score = 37 (18.1 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 500 GLYDKSIELQKRV--GAFSMALDTINK 524
G+ + +E + V G ++ ALDTIN+
Sbjct: 918 GVLLRMMEAKAEVEAGKWTAALDTINE 944
>SGD|S000001898 [details] [associations]
symbol:NIC96 "Linker nucleoporin component of the nuclear
pore complex (NPC)" species:4932 "Saccharomyces cerevisiae"
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0005643
"nuclear pore" evidence=IEA;IDA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0044615 "nuclear pore nuclear basket" evidence=IDA] [GO:0017056
"structural constituent of nuclear pore" evidence=IMP] [GO:0006606
"protein import into nucleus" evidence=IMP] [GO:0044612 "nuclear
pore linkers" evidence=IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0006999 "nuclear pore
organization" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR007231 Pfam:PF04097 SGD:S000001898 GO:GO:0031965
EMBL:D50617 EMBL:BK006940 GO:GO:0006606 GO:GO:0051028 GO:GO:0000055
TCDB:9.A.14.1.1 GO:GO:0006999 GO:GO:0017056 eggNOG:NOG312233
KO:K14309 OrthoDB:EOG4PP1RD PANTHER:PTHR11225 EMBL:X72923
PIR:S35319 RefSeq:NP_116657.1 PDB:2QX5 PDB:2RFO PDBsum:2QX5
PDBsum:2RFO ProteinModelPortal:P34077 SMR:P34077 DIP:DIP-745N
IntAct:P34077 MINT:MINT-398487 STRING:P34077 PaxDb:P34077
PeptideAtlas:P34077 EnsemblFungi:YFR002W GeneID:850552
KEGG:sce:YFR002W CYGD:YFR002w GeneTree:ENSGT00390000016353
HOGENOM:HOG000093574 OMA:FNDYMMK EvolutionaryTrace:P34077
NextBio:966333 Genevestigator:P34077 GermOnline:YFR002W
GO:GO:0044612 GO:GO:0044615 Uniprot:P34077
Length = 839
Score = 102 (41.0 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 62/283 (21%), Positives = 124/283 (43%)
Query: 131 VQQTASRKMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLRD 190
++ S+ +++V +++LE +Y + + + + G+ N+ ++++F+ +L+
Sbjct: 260 LESMKSKDINIVEVGKQYLEQQFLQYTDNLYKKNMNE----GLATNVNKIKSFIDTKLKK 315
Query: 191 YGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRAS-----NQFAPLLTE 245
+ I + V W I++ LR G EA V + ++A+ F
Sbjct: 316 ADK-SWKISNLTVINGVPI-WALIFYLLRAGLIKEALQVLVENKANIKKVEQSFLTYFKA 373
Query: 246 WINTGGM-VPPEIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRD 304
+ ++ +P E + E ++ ++ G D +L +Y +I R + R ++
Sbjct: 374 YASSKDHGLPVEYSTKLHTEYNQHIK-SSLDG----DPYRLAVYKLIG--RCDLSR--KN 424
Query: 305 LPTLFSTIEDFLWFKLSAIRDVPSEAPSVVLSDGLAPYSLDDLQVYLNKFDPSYYTKNGK 364
+P + +IED+LW L I++ +E V YSL+D Q + + PS ++
Sbjct: 425 IPAVTLSIEDWLWMHLMLIKEKDAENDPVY-----ERYSLEDFQNIIISYGPSRFSN--- 476
Query: 365 DPLVYPYVLLLSIQLLPAVLYLSKESGDEGYNIDAAHISIVLA 407
Y LLLS A+ Y S +DA H++I LA
Sbjct: 477 ---YYLQTLLLSGLYGLAIDYTYTFS-----EMDAVHLAIGLA 511
Score = 90 (36.7 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 41/189 (21%), Positives = 84/189 (44%)
Query: 468 GAGEEGELGRYITDLKARQQFLLE-AAGQCQEAG-LYDKSIELQKRVGAFSMALDTINKC 525
G EE + ++ D K + E AA + E G +YD SI L + + + + +N
Sbjct: 602 GVIEERQPLLHVRDEKEFLHTITEQAARRADEDGRIYD-SILLYQLAEEYDIVITLVNSL 660
Query: 526 LSEAIFAMSRGRL----DGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQ 581
LS+ + A + D S+T ++ + + + Y+ + + V ++ +
Sbjct: 661 LSDTLSASDLDQPLVGPDDNSETNPVLLA-RRMASI--YFDNAGISRQIHVKNKEICMLL 717
Query: 582 LEAILSVHKMARSGHYLDALREVAKLPFLPF-DPRVPDAMVDVFQSLSPHVQACVPDLLR 640
L I S+ ++ + + + L ++ L LPF D F +L ++ +P+LL
Sbjct: 718 LN-ISSIRELYFNKQWQETLSQMELLDLLPFSDELSARKKAQDFSNLDDNIVKNIPNLLI 776
Query: 641 VALTCLDNV 649
+ L+C+ N+
Sbjct: 777 ITLSCISNM 785
Score = 68 (29.0 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 29/140 (20%), Positives = 60/140 (42%)
Query: 2 DWQKEKRDFLRSLSRISTLPKTNMTDTSTGGTLPGQMASMASSPQ--ISSGPSGMELVPL 59
DW + K + +++ I K + + +L ++ S + ++S S + +
Sbjct: 147 DWAQHKNEVMKNFG-ILIQDKKTVDHKKSISSLDPKLPSWGNKGNNILNSNESRLNV--- 202
Query: 60 ANKPLLEKKATVYAEVVKNLNNARQQGLPFKPATAFKGAYESLAIESSSGKSVNIQKI-- 117
+L +K YA +V NN+RQ F A F ++I SS+ + N Q +
Sbjct: 203 NENNILREKFENYARIVFQFNNSRQANGNFDIANEF------ISILSSANGTRNAQLLES 256
Query: 118 WHLLQTMMGEHATVQQTASR 137
W +L++M + + + +
Sbjct: 257 WKILESMKSKDINIVEVGKQ 276
>UNIPROTKB|F1NEI9 [details] [associations]
symbol:NUP93 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006810
"transport" evidence=IEA] InterPro:IPR007231 Pfam:PF04097
GO:GO:0006810 GO:GO:0005643 PANTHER:PTHR11225
GeneTree:ENSGT00390000016353 OMA:IAFLFRM EMBL:AADN02051565
EMBL:AADN02051566 EMBL:AADN02051567 IPI:IPI00592166 PRIDE:F1NEI9
Ensembl:ENSGALT00000004754 NextBio:20819256 Uniprot:F1NEI9
Length = 819
Score = 145 (56.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 59/218 (27%), Positives = 92/218 (42%)
Query: 113 NIQKIWHLLQTMMG-------EHATVQQTASRKMSLVIGARRHLEWGHEKYIMDTIQSHP 165
NI ++W +++ M + V+ +M V A R+LE ++ Y T+ +
Sbjct: 219 NISEMWAMVKQMTSVRLVSASDVLNVRTNLEVRMEFVRQALRYLEQSYKNYTFLTVFGNL 278
Query: 166 AQAALGGVVGNLQRVRAFLRIRLRDYGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDE 225
QA LGGV G Q VR++L I+L V G+ P W IY+C+R G
Sbjct: 279 HQAQLGGVPGTYQLVRSYLNIKL-PAPVPGLQDGEVEGHP----VWALIYYCMRCGDLTA 333
Query: 226 ARNVALSSRASNQFAPLLTEWINTGGMVPPEIAAAASEECDKMLRMGDRVGRAAYDKKKL 285
A +V RA +Q T W + A+E +K+ R R D K
Sbjct: 334 AMHVV--KRAQHQLGEFKT-WFQEYMNSKDRRLSTATE--NKLRLHYRRALRNNTDPYKR 388
Query: 286 LLYAIISGSRRQIDRLLRDLPTLFSTIEDFLWFKLSAI 323
+Y II + D + + + ED+LW KL+ +
Sbjct: 389 AVYCIIG----RCD-ITDNQSEVADKTEDYLWLKLNQV 421
Score = 62 (26.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/179 (18%), Positives = 75/179 (41%)
Query: 468 GAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLS 527
G+ + G + ++ +D K + + A + GL++++ +L L+ +NK LS
Sbjct: 591 GSRKPGVIDKFNSDTKP---IINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLS 647
Query: 528 EAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILS 587
+ +S + + E + ++ HS I E Y + ++ + T L+ I
Sbjct: 648 PVVPQISTPQSNKE-RLKNMAHS---IAER---YKAQGISAKKSI--DSTFYLLLDLITF 698
Query: 588 VHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCL 646
+ +GH A + +L +P + V F++ S ++ + ++L + L
Sbjct: 699 FDEY-HAGHIDRAFDIIERLKLVPLSQDCVEERVAAFRNFSDEIRHNLSEVLLATMNIL 756
>UNIPROTKB|G4N675 [details] [associations]
symbol:MGG_08590 "Nucleoporin NIC96" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR007231 Pfam:PF04097 GO:GO:0006810
GO:GO:0005643 EMBL:CM001234 KO:K14309 PANTHER:PTHR11225
InterPro:IPR025574 Pfam:PF13634 RefSeq:XP_003716118.1
ProteinModelPortal:G4N675 EnsemblFungi:MGG_08590T0 GeneID:2678810
KEGG:mgr:MGG_08590 Uniprot:G4N675
Length = 1119
Score = 131 (51.2 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 60/288 (20%), Positives = 127/288 (44%)
Query: 133 QTASRKMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLRDYG 192
+ + + ++ GA R+LE + TI P +A LGG + ++RA++R+
Sbjct: 481 EASELRKRIINGANRYLEKQAFQEAEATIAKSPQEANLGGRPDVISKIRAYIRVLAAKKN 540
Query: 193 VLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFAPL---LTEWINT 249
++ + D + Q + W +++ LRTG+ +EA ++ N F + + +IN+
Sbjct: 541 LVT-ENADLQ-QVQGEYVWAIVFYLLRTGHVNEAAMYVNENQ--NHFRSIDRTFSSYINS 596
Query: 250 GGMVPPE-IAAAASEECDKMLRMGDR-VGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPT 307
+ E C+ R + D ++ Y I+ R ++ R L
Sbjct: 597 YATSEDRRLKRPMQERCNNEYTQRVRNAPEGSIDPYRMACYKIVG--RCELSN--RSLEG 652
Query: 308 LFSTIEDFLWFKLSAIRDVPSEAPSVVLSDGLAPYSLDDLQVYLNKFDPSYYT-KNGK-- 364
L I+D++W + + R+ + + + ++ Y L DLQ + + ++ K+G
Sbjct: 653 LRFGIDDWIWLQFNLARE--GDRTTELANE---TYGLADLQANIQEIGNKHFAAKSGAAG 707
Query: 365 DPLVYPYVLLLSIQLLPAVLYLSKESGDEGYN-IDAAHISIVLADHGM 411
D + + + +Q+L A +Y + + ++ DA H +I L +G+
Sbjct: 708 DDVNGSFSMFFFLQIL-AGMYEAAVAYLYSFSRTDAVHFAIALEYYGL 754
Score = 65 (27.9 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 23/82 (28%), Positives = 41/82 (50%)
Query: 467 RGAGEE-GELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKC 525
RG EE G+L + + LEAA +++G ++ L G + + +++
Sbjct: 854 RGMIEERGKLVALDDEADFLRTISLEAARAAEDSGRTTDAVLLNHLAGDYDAVIVLVSRT 913
Query: 526 LSEAIFAMSRGRLDGESQTASL 547
LSE+I +M G LDG+++ L
Sbjct: 914 LSESI-SMDGG-LDGDNEPLRL 933
Score = 59 (25.8 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 29/117 (24%), Positives = 51/117 (43%)
Query: 12 RSLSRISTLPKTNMTDTSTGGTLPGQMASM-ASSPQISS-GPSGMEL-VPLANKPLLEKK 68
R+ R ST K+ M + G P ++ S A + G +G+ +P N+ L+ K
Sbjct: 338 RATQRNSTFGKSGMLRSVIGS--PSRIGSHGAQFVDVEMVGHNGLGTGIPSINERFLDDK 395
Query: 69 ATVYAEVVKNLNNARQQGLPFKPATAFKGAYESLAIESSSGKSVNIQKIWHLLQTMM 125
+ E + +LN++R L + P +E + SG V+ KI+ M+
Sbjct: 396 QRQFIEKIHSLNDSRLMNLSY-PIM-----HEFADVTKRSG-DVHAPKIYEAYNAMI 445
Score = 58 (25.5 bits), Expect = 6.0e-07, Sum P(3) = 6.0e-07
Identities = 44/193 (22%), Positives = 87/193 (45%)
Query: 499 AGLYDKSIELQKRVGAFSMALDTINKCLSEAI-FAMSRGRLDG-ESQ----TASLIHSGN 552
AG YD I L R + S+++D +E + A + R++G E+Q T+ + + +
Sbjct: 900 AGDYDAVIVLVSRTLSESISMDGGLDGDNEPLRLAPVKPRVEGVEAQEQAGTSLSLAAID 959
Query: 553 EILEMEKYYPEVSLHEREQVLEQQT--VLRQLEAIL----SVHKMARSGHYLDALREVAK 606
+ +E+ + ++++ER+ + ++ R A+L + + ++ + DAL ++
Sbjct: 960 DPVELARTM--LTMYERDIMFRRKIREPNRAACAVLLQMSEIKGLIQAQQWPDALDKIRS 1017
Query: 607 LPFLPFDPRV-PDAM---VDVFQSLSPHVQACVPDLLRVALTCLDNVTD--TDGSLRAMR 660
+ LP D + P A+ +F LS V + VP+L+ C + G
Sbjct: 1018 IDILPLDAKGDPSAIRSYAALFAGLSQAVASNVPNLVMWTTECCTRQRERLASGQFTGNE 1077
Query: 661 AKIANFLANNMNQ 673
A A L N + Q
Sbjct: 1078 AT-ARMLYNELRQ 1089
>ZFIN|ZDB-GENE-990415-46 [details] [associations]
symbol:nup93 "nucleoporin 93" species:7955 "Danio
rerio" [GO:0006810 "transport" evidence=IEA] [GO:0005643 "nuclear
pore" evidence=IEA;ISS] [GO:0051292 "nuclear pore complex assembly"
evidence=ISS] [GO:0034399 "nuclear periphery" evidence=ISS]
[GO:0031965 "nuclear membrane" evidence=ISS] [GO:0017056
"structural constituent of nuclear pore" evidence=ISS] [GO:0015031
"protein transport" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR007231 Pfam:PF04097 ZFIN:ZDB-GENE-990415-46
GO:GO:0015031 GO:GO:0005643 GO:GO:0051028 eggNOG:NOG312233
KO:K14309 PANTHER:PTHR11225 CTD:9688 HOGENOM:HOG000007350
HOVERGEN:HBG052701 OrthoDB:EOG4BRWK4 EMBL:U77595 EMBL:BC044466
EMBL:AB047683 IPI:IPI00488279 RefSeq:NP_571056.2 UniGene:Dr.653
STRING:Q7ZU29 PRIDE:Q7ZU29 GeneID:30172 KEGG:dre:30172
InParanoid:Q7ZU29 NextBio:20806640 ArrayExpress:Q7ZU29
Uniprot:Q7ZU29
Length = 820
Score = 130 (50.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 60/220 (27%), Positives = 97/220 (44%)
Query: 113 NIQKIWHLLQTM-----MGEHATVQQTAS--RKMSLVIGARRHLEWGHEKYIMDTIQSHP 165
N+ ++W +++ M + T++ S +M+ V A + LE ++ Y + T+ +
Sbjct: 220 NVSEMWLMVKQMTDVLLVPAKDTLKSRVSVDMQMAFVRQALQFLENSYKNYTLVTVFGNL 279
Query: 166 AQAALGGVVGNLQRVRAFLRIRLRDY--GVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYY 223
QA LGGV G Q V +FL I+L G D G+ P W IYFCLR G
Sbjct: 280 HQAQLGGVPGTYQLVCSFLNIKLPTPLPGRQD---GEVEGHP----VWALIYFCLRCGDL 332
Query: 224 DEARNVALSSRASNQFAPLLTEWINTGGMVPPEIAAAASEECDKMLRMGDRVGRAAYDKK 283
A V ++A +Q W P + A+E +K+ RV R + D
Sbjct: 333 SAAMQVV--NKAQHQLGDFKI-WFQEYMNSPDRRLSPATE--NKLRLHYRRVLRNSADPY 387
Query: 284 KLLLYAIISGSRRQIDRLLRDLPTLFSTIEDFLWFKLSAI 323
K +Y +I + D + + + ED+LW KL+ +
Sbjct: 388 KRAVYCLIG----KCD-IGDNHGEVADKTEDYLWLKLNQV 422
Score = 68 (29.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 34/179 (18%), Positives = 75/179 (41%)
Query: 468 GAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLS 527
G+ + G + ++ D +A + + A + + GL++++++L + L+ +NK LS
Sbjct: 592 GSRKPGVIDKFAGDTRA---IITKVASEAENKGLFEEAVKLYELAKNADKVLELMNKLLS 648
Query: 528 EAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILS 587
I +S + +S L + I E +Y E+ T L+ +++
Sbjct: 649 PVIAQVS----EPQSNKERLKNMAVAIAE--RYRANGVAGEKSV---DNTFYLLLD-LMT 698
Query: 588 VHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCL 646
+GH A + +L +P + V F++ S V+ + ++L + L
Sbjct: 699 FFDEYHAGHIDRAYDVIERLKLVPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNIL 757
>MGI|MGI:1919055 [details] [associations]
symbol:Nup93 "nucleoporin 93" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0017056 "structural constituent of nuclear pore"
evidence=ISO] [GO:0031965 "nuclear membrane" evidence=ISO]
[GO:0034399 "nuclear periphery" evidence=ISO] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0051292 "nuclear pore complex
assembly" evidence=ISO] InterPro:IPR007231 Pfam:PF04097
MGI:MGI:1919055 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0051028 eggNOG:NOG312233 KO:K14309 PANTHER:PTHR11225
GeneTree:ENSGT00390000016353 CTD:9688 HOGENOM:HOG000007350
HOVERGEN:HBG052701 OMA:IAFLFRM OrthoDB:EOG4BRWK4 ChiTaRS:NUP93
EMBL:AK028864 EMBL:AK045380 EMBL:AK129055 EMBL:AK167105
EMBL:AK169693 EMBL:BC023140 EMBL:AJ505051 IPI:IPI00222307
IPI:IPI00410800 RefSeq:NP_765998.1 UniGene:Mm.458170
ProteinModelPortal:Q8BJ71 SMR:Q8BJ71 IntAct:Q8BJ71 STRING:Q8BJ71
PhosphoSite:Q8BJ71 REPRODUCTION-2DPAGE:IPI00222307
REPRODUCTION-2DPAGE:IPI00410800 PaxDb:Q8BJ71 PRIDE:Q8BJ71
Ensembl:ENSMUST00000079961 Ensembl:ENSMUST00000109547 GeneID:71805
KEGG:mmu:71805 UCSC:uc009mvz.1 UCSC:uc009mwb.1 InParanoid:Q8BJ71
NextBio:334568 Bgee:Q8BJ71 CleanEx:MM_NUP93 Genevestigator:Q8BJ71
GermOnline:ENSMUSG00000032939 Uniprot:Q8BJ71
Length = 819
Score = 137 (53.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 56/188 (29%), Positives = 82/188 (43%)
Query: 138 KMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLR--DYGVLD 195
+M V A +LE ++ Y + T+ + QA LGGV G Q VR+FL I+L G+ D
Sbjct: 251 RMDFVKQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPSPGLQD 310
Query: 196 FDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFAPLLTEWINTGGMVPP 255
G+ P W IY+C+R G A V SRA +Q T W
Sbjct: 311 ---GEVEGHP----VWALIYYCMRCGDLLAASQVV--SRAQHQLGEFKT-WFQEYMNSKD 360
Query: 256 EIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDF 315
+ A+E +K+ R R D K +Y II + D + + + ED+
Sbjct: 361 RRLSPATE--NKLRLHYRRALRNNTDPYKRAVYCIIG----RCD-ITDNQSEVADKTEDY 413
Query: 316 LWFKLSAI 323
LW KL+ +
Sbjct: 414 LWLKLNQV 421
Score = 60 (26.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 33/179 (18%), Positives = 72/179 (40%)
Query: 468 GAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLS 527
G+ + G + ++ +D K + + A + GL++++ +L L+ +NK LS
Sbjct: 591 GSRKPGVIDKFTSDTKP---IINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS 647
Query: 528 EAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILS 587
+ +S + + E N L + + Y + + V T L+ I
Sbjct: 648 PVVPQISAPQSNKERLK-------NMALSIAERYRAQGISANKFV--DSTFYLLLDLITF 698
Query: 588 VHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCL 646
+ SGH A + +L +P + + V F++ S ++ + ++L + L
Sbjct: 699 FDEY-HSGHIDRAFDIIDRLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNIL 756
>RGD|1311525 [details] [associations]
symbol:Nup93 "nucleoporin 93" species:10116 "Rattus norvegicus"
[GO:0005643 "nuclear pore" evidence=IEA;ISO;ISS] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0017056 "structural constituent of nuclear pore"
evidence=ISO;ISS] [GO:0031965 "nuclear membrane" evidence=ISO;ISS]
[GO:0034399 "nuclear periphery" evidence=ISO;ISS] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0051292 "nuclear pore complex
assembly" evidence=ISO;ISS] InterPro:IPR007231 Pfam:PF04097
RGD:1311525 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0051028
eggNOG:NOG312233 KO:K14309 PANTHER:PTHR11225 CTD:9688
HOGENOM:HOG000007350 HOVERGEN:HBG052701 OrthoDB:EOG4BRWK4
EMBL:BC081925 IPI:IPI00471848 RefSeq:NP_001011925.1
UniGene:Rn.137413 ProteinModelPortal:Q66HC5 STRING:Q66HC5
PRIDE:Q66HC5 GeneID:291874 KEGG:rno:291874 UCSC:RGD:1311525
NextBio:633324 ArrayExpress:Q66HC5 Genevestigator:Q66HC5
Uniprot:Q66HC5
Length = 819
Score = 137 (53.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 56/188 (29%), Positives = 82/188 (43%)
Query: 138 KMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLR--DYGVLD 195
+M V A +LE ++ Y + T+ + QA LGGV G Q VR+FL I+L G+ D
Sbjct: 251 RMDFVKQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPSPGLQD 310
Query: 196 FDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFAPLLTEWINTGGMVPP 255
G+ P W IY+C+R G A V SRA +Q T W
Sbjct: 311 ---GEVEGHP----VWALIYYCMRCGDLLAASQVV--SRAQHQLGEFKT-WFQEYMNSKD 360
Query: 256 EIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDF 315
+ A+E +K+ R R D K +Y II + D + + + ED+
Sbjct: 361 RRLSPATE--NKLRLHYRRALRNNTDPYKRAVYCIIG----RCD-ITDNQSEVADKTEDY 413
Query: 316 LWFKLSAI 323
LW KL+ +
Sbjct: 414 LWLKLNQV 421
Score = 60 (26.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 33/179 (18%), Positives = 72/179 (40%)
Query: 468 GAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLS 527
G+ + G + ++ +D K + + A + GL++++ +L L+ +NK LS
Sbjct: 591 GSRKPGVIDKFTSDTKP---IINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS 647
Query: 528 EAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILS 587
+ +S + + E N L + + Y + + V T L+ I
Sbjct: 648 PVVPQISAPQSNKERLK-------NMALSIAERYRAQGISANKFV--DSTFYLLLDLITF 698
Query: 588 VHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCL 646
+ SGH A + +L +P + + V F++ S ++ + ++L + L
Sbjct: 699 FDEY-HSGHIDRAFDIIDRLKLVPLNQESMEERVAAFRNFSDEIRHNLSEVLLATMNIL 756
>UNIPROTKB|F1NAQ5 [details] [associations]
symbol:NUP93 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006810
"transport" evidence=IEA] InterPro:IPR007231 Pfam:PF04097
GO:GO:0006810 GO:GO:0005643 PANTHER:PTHR11225
GeneTree:ENSGT00390000016353 EMBL:AADN02051565 EMBL:AADN02051566
EMBL:AADN02051567 IPI:IPI00574500 Ensembl:ENSGALT00000004755
Uniprot:F1NAQ5
Length = 497
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 59/218 (27%), Positives = 92/218 (42%)
Query: 113 NIQKIWHLLQTMMG-------EHATVQQTASRKMSLVIGARRHLEWGHEKYIMDTIQSHP 165
NI ++W +++ M + V+ +M V A R+LE ++ Y T+ +
Sbjct: 219 NISEMWAMVKQMTSVRLVSASDVLNVRTNLEVRMEFVRQALRYLEQSYKNYTFLTVFGNL 278
Query: 166 AQAALGGVVGNLQRVRAFLRIRLRDYGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDE 225
QA LGGV G Q VR++L I+L V G+ P W IY+C+R G
Sbjct: 279 HQAQLGGVPGTYQLVRSYLNIKL-PAPVPGLQDGEVEGHP----VWALIYYCMRCGDLTA 333
Query: 226 ARNVALSSRASNQFAPLLTEWINTGGMVPPEIAAAASEECDKMLRMGDRVGRAAYDKKKL 285
A +V RA +Q T W + A+E +K+ R R D K
Sbjct: 334 AMHVV--KRAQHQLGEFKT-WFQEYMNSKDRRLSTATE--NKLRLHYRRALRNNTDPYKR 388
Query: 286 LLYAIISGSRRQIDRLLRDLPTLFSTIEDFLWFKLSAI 323
+Y II + D + + + ED+LW KL+ +
Sbjct: 389 AVYCIIG----RCD-ITDNQSEVADKTEDYLWLKLNQV 421
>UNIPROTKB|Q8N1F7 [details] [associations]
symbol:NUP93 "Nuclear pore complex protein Nup93"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0051292 "nuclear pore
complex assembly" evidence=IMP] [GO:0017056 "structural constituent
of nuclear pore" evidence=IMP] [GO:0031965 "nuclear membrane"
evidence=IDA] [GO:0034399 "nuclear periphery" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=TAS] [GO:0005975
"carbohydrate metabolic process" evidence=TAS] [GO:0008645 "hexose
transport" evidence=TAS] [GO:0010827 "regulation of glucose
transport" evidence=TAS] [GO:0015758 "glucose transport"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0019221 "cytokine-mediated signaling pathway" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR007231
Pfam:PF04097 GO:GO:0005635 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0016032 GO:GO:0044281 GO:GO:0015031
GO:GO:0005975 GO:GO:0031965 GO:GO:0005643 GO:GO:0019221
GO:GO:0015758 GO:GO:0010827 GO:GO:0055085 GO:GO:0051028
eggNOG:NOG312233 KO:K14309 PANTHER:PTHR11225 CTD:9688
HOGENOM:HOG000007350 HOVERGEN:HBG052701 OMA:IAFLFRM
OrthoDB:EOG4BRWK4 EMBL:D42085 EMBL:AK294176 EMBL:BC034346
EMBL:AC012181 EMBL:AC106779 EMBL:AC127456 EMBL:AK056637
IPI:IPI00397904 IPI:IPI00644506 RefSeq:NP_001229724.1
RefSeq:NP_001229725.1 RefSeq:NP_055484.3 UniGene:Hs.276878
ProteinModelPortal:Q8N1F7 SMR:Q8N1F7 DIP:DIP-44020N IntAct:Q8N1F7
MINT:MINT-3039167 STRING:Q8N1F7 PhosphoSite:Q8N1F7 DMDM:116242684
PaxDb:Q8N1F7 PRIDE:Q8N1F7 Ensembl:ENST00000308159
Ensembl:ENST00000542526 Ensembl:ENST00000564887 GeneID:9688
KEGG:hsa:9688 UCSC:uc002eka.3 GeneCards:GC16P056764 HGNC:HGNC:28958
HPA:HPA017937 MIM:614351 neXtProt:NX_Q8N1F7 PharmGKB:PA134912759
InParanoid:Q8N1F7 PhylomeDB:Q8N1F7 ChiTaRS:NUP93 GenomeRNAi:9688
NextBio:36387 ArrayExpress:Q8N1F7 Bgee:Q8N1F7 CleanEx:HS_NUP93
Genevestigator:Q8N1F7 GermOnline:ENSG00000102900 Uniprot:Q8N1F7
Length = 819
Score = 132 (51.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 55/188 (29%), Positives = 82/188 (43%)
Query: 138 KMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLRDY--GVLD 195
+M V A +LE ++ Y + T+ + QA LGGV G Q VR+FL I+L G+ D
Sbjct: 251 RMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQD 310
Query: 196 FDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFAPLLTEWINTGGMVPP 255
G+ P W IY+C+R G A V +RA +Q T W
Sbjct: 311 ---GEVEGHP----VWALIYYCMRCGDLLAASQVV--NRAQHQLGEFKT-WFQEYMNSKD 360
Query: 256 EIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDF 315
+ A+E +K+ R R D K +Y II + D + + + ED+
Sbjct: 361 RRLSPATE--NKLRLHYRRALRNNTDPYKRAVYCIIG----RCD-VTDNQSEVADKTEDY 413
Query: 316 LWFKLSAI 323
LW KL+ +
Sbjct: 414 LWLKLNQV 421
Score = 61 (26.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 33/179 (18%), Positives = 72/179 (40%)
Query: 468 GAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLS 527
G+ + G + ++ +D K + + A + GL++++ +L L+ +NK LS
Sbjct: 591 GSRKPGVIDKFTSDTKP---IINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS 647
Query: 528 EAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILS 587
+ +S + + E N L + + Y + + V T L+ I
Sbjct: 648 PVVPQISAPQSNKERLK-------NMALSIAERYRAQGISANKFV--DSTFYLLLDLITF 698
Query: 588 VHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCL 646
+ SGH A + +L +P + + V F++ S ++ + ++L + L
Sbjct: 699 FDEY-HSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNIL 756
>UNIPROTKB|Q5R822 [details] [associations]
symbol:NUP93 "Nuclear pore complex protein Nup93"
species:9601 "Pongo abelii" [GO:0005643 "nuclear pore"
evidence=ISS] [GO:0017056 "structural constituent of nuclear pore"
evidence=ISS] [GO:0031965 "nuclear membrane" evidence=ISS]
[GO:0034399 "nuclear periphery" evidence=ISS] [GO:0051292 "nuclear
pore complex assembly" evidence=ISS] InterPro:IPR007231
Pfam:PF04097 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0051028 KO:K14309 PANTHER:PTHR11225 CTD:9688
HOGENOM:HOG000007350 HOVERGEN:HBG052701 OMA:IAFLFRM EMBL:CR859615
EMBL:CR859933 RefSeq:NP_001126031.1 RefSeq:NP_001128848.1
UniGene:Pab.18957 UniGene:Pab.19719 PRIDE:Q5R822 GeneID:100172979
GeneID:100189766 KEGG:pon:100172979 KEGG:pon:100189766
InParanoid:Q5R8Y2 Uniprot:Q5R822
Length = 819
Score = 132 (51.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 55/188 (29%), Positives = 82/188 (43%)
Query: 138 KMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLRDY--GVLD 195
+M V A +LE ++ Y + T+ + QA LGGV G Q VR+FL I+L G+ D
Sbjct: 251 RMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQD 310
Query: 196 FDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFAPLLTEWINTGGMVPP 255
G+ P W IY+C+R G A V +RA +Q T W
Sbjct: 311 ---GEVEGHP----VWALIYYCMRCGDLLAASQVV--NRAQHQLGEFKT-WFQEYMNSKD 360
Query: 256 EIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDF 315
+ A+E +K+ R R D K +Y II + D + + + ED+
Sbjct: 361 RRLSPATE--NKLRLHYRRALRNNTDPYKRAVYCIIG----RCD-VTDNQSEVADKTEDY 413
Query: 316 LWFKLSAI 323
LW KL+ +
Sbjct: 414 LWLKLNQV 421
Score = 61 (26.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 33/179 (18%), Positives = 72/179 (40%)
Query: 468 GAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLS 527
G+ + G + ++ +D K + + A + GL++++ +L L+ +NK LS
Sbjct: 591 GSRKPGVIDKFTSDTKP---IINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS 647
Query: 528 EAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILS 587
+ +S + + E N L + + Y + + V T L+ I
Sbjct: 648 PVVPQISAPQSNKERLK-------NMALSIAERYRAQGISANKFV--DSTFYLLLDLITF 698
Query: 588 VHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCL 646
+ SGH A + +L +P + + V F++ S ++ + ++L + L
Sbjct: 699 FDEY-HSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNIL 756
>UNIPROTKB|H3BVG0 [details] [associations]
symbol:NUP93 "Nuclear pore complex protein Nup93"
species:9606 "Homo sapiens" [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR007231 Pfam:PF04097 GO:GO:0006810 GO:GO:0005643
PANTHER:PTHR11225 EMBL:AC012181 EMBL:AC106779 EMBL:AC127456
HGNC:HGNC:28958 ChiTaRS:NUP93 ProteinModelPortal:H3BVG0 SMR:H3BVG0
Ensembl:ENST00000569842 Bgee:H3BVG0 Uniprot:H3BVG0
Length = 880
Score = 132 (51.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 55/188 (29%), Positives = 82/188 (43%)
Query: 138 KMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLRDY--GVLD 195
+M V A +LE ++ Y + T+ + QA LGGV G Q VR+FL I+L G+ D
Sbjct: 251 RMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQD 310
Query: 196 FDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFAPLLTEWINTGGMVPP 255
G+ P W IY+C+R G A V +RA +Q T W
Sbjct: 311 ---GEVEGHP----VWALIYYCMRCGDLLAASQVV--NRAQHQLGEFKT-WFQEYMNSKD 360
Query: 256 EIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDF 315
+ A+E +K+ R R D K +Y II + D + + + ED+
Sbjct: 361 RRLSPATE--NKLRLHYRRALRNNTDPYKRAVYCIIG----RCD-VTDNQSEVADKTEDY 413
Query: 316 LWFKLSAI 323
LW KL+ +
Sbjct: 414 LWLKLNQV 421
Score = 61 (26.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 33/179 (18%), Positives = 72/179 (40%)
Query: 468 GAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLS 527
G+ + G + ++ +D K + + A + GL++++ +L L+ +NK LS
Sbjct: 591 GSRKPGVIDKFTSDTKP---IINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS 647
Query: 528 EAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILS 587
+ +S + + E N L + + Y + + V T L+ I
Sbjct: 648 PVVPQISAPQSNKERLK-------NMALSIAERYRAQGISANKFV--DSTFYLLLDLITF 698
Query: 588 VHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCL 646
+ SGH A + +L +P + + V F++ S ++ + ++L + L
Sbjct: 699 FDEY-HSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNIL 756
>UNIPROTKB|I3LBE6 [details] [associations]
symbol:NUP93 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006810 "transport" evidence=IEA] [GO:0005643 "nuclear
pore" evidence=IEA] InterPro:IPR007231 Pfam:PF04097 GO:GO:0006810
GO:GO:0005643 PANTHER:PTHR11225 GeneTree:ENSGT00390000016353
OMA:IAFLFRM Ensembl:ENSSSCT00000032448 Uniprot:I3LBE6
Length = 759
Score = 131 (51.2 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 55/188 (29%), Positives = 82/188 (43%)
Query: 138 KMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLRDY--GVLD 195
+M V A +LE ++ Y + T+ + QA LGGV G Q VR+FL I+L G+ D
Sbjct: 191 RMEFVRQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQD 250
Query: 196 FDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFAPLLTEWINTGGMVPP 255
G+ P W IY+C+R G A V +RA +Q T W
Sbjct: 251 ---GEVEGHP----VWALIYYCMRCGDLLAASQVV--NRAQHQLGEFKT-WFQEYMNSKD 300
Query: 256 EIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDF 315
+ A+E +K+ R R D K +Y II + D + + + ED+
Sbjct: 301 RRLSPATE--NKLRLHYRRALRNNTDPYKRAVYCIIG----RCD-VTDNQSEVADKTEDY 353
Query: 316 LWFKLSAI 323
LW KL+ +
Sbjct: 354 LWLKLNQV 361
Score = 60 (26.2 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 33/179 (18%), Positives = 72/179 (40%)
Query: 468 GAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLS 527
G+ + G + ++ +D K + + A + GL++++ +L L+ +NK LS
Sbjct: 531 GSRKPGVIDKFTSDTKP---IINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS 587
Query: 528 EAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILS 587
+ +S + + E N L + + Y + + V T L+ I
Sbjct: 588 PVVPQISAPQSNKERLK-------NMALSIAERYRAQGISANKFV--DSTFYLLLDLITF 638
Query: 588 VHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCL 646
+ SGH A + +L +P + + V F++ S ++ + ++L + L
Sbjct: 639 FDEY-HSGHIDRAFDIIDRLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNIL 696
>UNIPROTKB|E2RSV7 [details] [associations]
symbol:NUP93 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] InterPro:IPR007231 Pfam:PF04097
GO:GO:0006810 GO:GO:0005643 PANTHER:PTHR11225
GeneTree:ENSGT00390000016353 OMA:IAFLFRM EMBL:AAEX03001582
Ensembl:ENSCAFT00000014471 NextBio:20853489 Uniprot:E2RSV7
Length = 925
Score = 134 (52.2 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 55/188 (29%), Positives = 82/188 (43%)
Query: 138 KMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLRDY--GVLD 195
+M V A +LE ++ Y + T+ + QA LGGV G Q VR+FL I+L G+ D
Sbjct: 357 RMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQD 416
Query: 196 FDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFAPLLTEWINTGGMVPP 255
G+ P W IY+C+R G A V +RA +Q T W
Sbjct: 417 ---GEVEGHP----VWALIYYCMRCGDLFAASQVV--NRAQHQLGEFKT-WFQEYMNSKD 466
Query: 256 EIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDF 315
+ A+E +K+ R R D K +Y II + D + + + ED+
Sbjct: 467 RRLSPATE--NKLRLHYRRALRNNTDPYKRAVYCIIG----RCD-ITDNQSEVADKTEDY 519
Query: 316 LWFKLSAI 323
LW KL+ +
Sbjct: 520 LWLKLNQV 527
Score = 58 (25.5 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 33/179 (18%), Positives = 72/179 (40%)
Query: 468 GAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLS 527
G+ + G + ++ +D K + + A + GL++++ +L L+ +N+ LS
Sbjct: 697 GSRKPGVIDKFTSDTKP---IINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNRLLS 753
Query: 528 EAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILS 587
+ +S + + E N L + + Y + + V T L+ I
Sbjct: 754 PVVPQISAPQSNKERLK-------NMALSIAERYRAQGISANKFV--DSTFYLLLDLITF 804
Query: 588 VHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCL 646
+ SGH A + +L +P + + V F++ S V+ + ++L + L
Sbjct: 805 FDEY-HSGHIDRAFDIIDRLKLVPLNQESVEERVAAFRNFSDEVRHNLSEVLLATMNIL 862
>UNIPROTKB|H3BPA9 [details] [associations]
symbol:NUP93 "Nuclear pore complex protein Nup93"
species:9606 "Homo sapiens" [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR007231 Pfam:PF04097 GO:GO:0006810 GO:GO:0005643
PANTHER:PTHR11225 EMBL:AC012181 EMBL:AC106779 EMBL:AC127456
HGNC:HGNC:28958 ChiTaRS:NUP93 Ensembl:ENST00000563858 Bgee:H3BPA9
Uniprot:H3BPA9
Length = 230
Score = 132 (51.5 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 55/188 (29%), Positives = 82/188 (43%)
Query: 138 KMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLRDY--GVLD 195
+M V A +LE ++ Y + T+ + QA LGGV G Q VR+FL I+L G+ D
Sbjct: 44 RMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQD 103
Query: 196 FDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFAPLLTEWINTGGMVPP 255
G+ P W IY+C+R G A V +RA +Q T W
Sbjct: 104 ---GEVEGHP----VWALIYYCMRCGDLLAASQVV--NRAQHQLGEFKT-WFQEYMNSKD 153
Query: 256 EIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDF 315
+ A+E +K+ R R D K +Y II + D + + + ED+
Sbjct: 154 RRLSPATE--NKLRLHYRRALRNNTDPYKRAVYCIIG----RCD-VTDNQSEVADKTEDY 206
Query: 316 LWFKLSAI 323
LW KL+ +
Sbjct: 207 LWLKLNQV 214
>UNIPROTKB|A5PJZ5 [details] [associations]
symbol:NUP93 "Nuclear pore complex protein Nup93"
species:9913 "Bos taurus" [GO:0034399 "nuclear periphery"
evidence=ISS] [GO:0031965 "nuclear membrane" evidence=ISS]
[GO:0017056 "structural constituent of nuclear pore" evidence=ISS]
[GO:0051292 "nuclear pore complex assembly" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR007231 Pfam:PF04097 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0051028 eggNOG:NOG312233
KO:K14309 PANTHER:PTHR11225 GeneTree:ENSGT00390000016353
EMBL:BC142296 IPI:IPI00689226 RefSeq:NP_001092391.1
UniGene:Bt.15873 STRING:A5PJZ5 PRIDE:A5PJZ5
Ensembl:ENSBTAT00000008683 GeneID:510004 KEGG:bta:510004 CTD:9688
HOGENOM:HOG000007350 HOVERGEN:HBG052701 InParanoid:A5PJZ5
OMA:IAFLFRM OrthoDB:EOG4BRWK4 NextBio:20869237 Uniprot:A5PJZ5
Length = 819
Score = 131 (51.2 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 55/188 (29%), Positives = 82/188 (43%)
Query: 138 KMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLRDY--GVLD 195
+M V A +LE ++ Y + T+ + QA LGGV G Q VR+FL I+L G+ D
Sbjct: 251 RMEFVRQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQD 310
Query: 196 FDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFAPLLTEWINTGGMVPP 255
G+ P W IY+C+R G A V +RA +Q T W
Sbjct: 311 ---GEVEGHP----VWALIYYCMRCGDLLAASQVV--NRAQHQLGEFKT-WFQEYMNSKD 360
Query: 256 EIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDF 315
+ A+E +K+ R R D K +Y II + D + + + ED+
Sbjct: 361 RRLSPATE--NKLRLHYRRALRNNTDPYKRAVYCIIG----RCD-VTDNQSEVADKTEDY 413
Query: 316 LWFKLSAI 323
LW KL+ +
Sbjct: 414 LWLKLNQV 421
Score = 59 (25.8 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 33/179 (18%), Positives = 72/179 (40%)
Query: 468 GAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLS 527
G+ + G + ++ +D K + + A + GL++++ +L L+ +NK LS
Sbjct: 591 GSRKPGVIDKFTSDTKP---IINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS 647
Query: 528 EAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILS 587
+ +S + + E N L + + Y + + V T L+ I
Sbjct: 648 PIVPQISAPQSNKERLK-------NMALSIAERYRAQGISANKFV--DSTFYLLLDLITF 698
Query: 588 VHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCL 646
+ SGH A + +L +P + + V F++ S ++ + ++L + L
Sbjct: 699 FDEY-HSGHIDRAFDIIDRLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNIL 756
>FB|FBgn0027537 [details] [associations]
symbol:Nup93-1 "Nucleoporin 93kD-1" species:7227 "Drosophila
melanogaster" [GO:0005643 "nuclear pore" evidence=ISS] [GO:0017056
"structural constituent of nuclear pore" evidence=ISS] [GO:0044615
"nuclear pore nuclear basket" evidence=ISS] [GO:0006999 "nuclear
pore organization" evidence=ISS] [GO:0007184 "SMAD protein import
into nucleus" evidence=IMP] [GO:0034613 "cellular protein
localization" evidence=IMP] [GO:0006607 "NLS-bearing substrate
import into nucleus" evidence=IMP] InterPro:IPR007231 Pfam:PF04097
EMBL:AE014298 GO:GO:0005643 GO:GO:0007184 PANTHER:PTHR11225
GeneTree:ENSGT00390000016353 OrthoDB:EOG4DJHBG EMBL:AF132159
RefSeq:NP_572929.1 UniGene:Dm.6699 IntAct:Q9XZ06 MINT:MINT-323320
STRING:Q9XZ06 EnsemblMetazoa:FBtr0073828 EnsemblMetazoa:FBtr0331714
GeneID:32350 KEGG:dme:Dmel_CG11092 UCSC:CG11092-RA
FlyBase:FBgn0027537 InParanoid:Q9XZ06 OMA:HICKLIT GenomeRNAi:32350
NextBio:778057 Uniprot:Q9XZ06
Length = 823
Score = 129 (50.5 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 53/217 (24%), Positives = 91/217 (41%)
Query: 113 NIQKIWHLLQTMMG---EHATVQQTASRKMS--LVIGARRHLEWGHEKYIMDTIQSHPAQ 167
++ ++W++LQ M +T+ +R+ S V AR +LE + Y+ I ++ A+
Sbjct: 214 SVAEMWNVLQFMTALPPVSSTIDPIKNRQTSPQFVEQARTYLERRYRTYMRKFIVANLAK 273
Query: 168 AALGGVVGNLQRVRAFLRIRLRDYGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDEAR 227
A GG+ VR+++ + L+ L + + D P+ W +Y+ LR+G D A
Sbjct: 274 ARRGGIPSVYHMVRSYVGVTLQGQRAL-YGLHDVNNGQPL---WPHVYYSLRSGDMDAAA 329
Query: 228 NVALSSRASNQFAPLLTEWINTGGMVPPEIAAAASEECDKMLRMGDRVGRAAYDKKKLLL 287
S LLT + G E L R+ RA D K +
Sbjct: 330 LYLKESGTCPDLLTLLT--LRKNG---DRDNLMVKLEGQLKLEYNSRL-RACTDPYKKAV 383
Query: 288 YAIISGSRRQIDRLLRDLPTLFSTIEDFLWFKLSAIR 324
Y ++ + L +I+DFLW +LS +R
Sbjct: 384 YVVLLACDPHFTHV-----ELMRSIDDFLWMQLSILR 415
Score = 61 (26.5 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 34/156 (21%), Positives = 62/156 (39%)
Query: 489 LLEAAG-QCQEAGLYDKSIELQKRVGAFSMALDTINKCLSEAIFAMSRGRLDGESQTASL 547
L E G + + G Y+ +IEL G AL +N L++ + ++ ++ +
Sbjct: 608 LAEMVGDELSKRGDYELAIELYFIGGQLDKALRLVNSLLAQVVHQPTQNG-SVRNRLGDI 666
Query: 548 IHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILSVHKMARSGHYLDALREVAKL 607
I+ + L + K EV QV+ TVL + ++ G AL +
Sbjct: 667 INRLDAALVVRKSDVEV------QVVVTYTVLTK---VMKFFDHYHEGALRSALEILTNN 717
Query: 608 PFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVAL 643
+P D V + + P V +PD+L ++
Sbjct: 718 HLIPASSLEVDECVTNIKRMGPEVIKVLPDILLASM 753
Score = 43 (20.2 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 541 ESQTASLIHSGNEILEMEKYYPEVSLHEREQV---LEQQTVLRQLEAILSVHKMARS 594
+S T L SG + L +EKY E + RE+ + T+ Q EA ++ +AR+
Sbjct: 421 DSNTEQLTFSGLQSLILEKY-GENYFNAREKAALYFQVLTLTGQFEA--AIEFLART 474
>UNIPROTKB|Q7ZX96 [details] [associations]
symbol:nup93 "Nuclear pore complex protein Nup93"
species:8355 "Xenopus laevis" [GO:0005643 "nuclear pore"
evidence=ISS] [GO:0017056 "structural constituent of nuclear pore"
evidence=ISS] [GO:0031965 "nuclear membrane" evidence=ISS]
[GO:0034399 "nuclear periphery" evidence=ISS] [GO:0051292 "nuclear
pore complex assembly" evidence=ISS] InterPro:IPR007231
Pfam:PF04097 GO:GO:0015031 GO:GO:0005643 GO:GO:0051028 KO:K14309
PANTHER:PTHR11225 CTD:9688 HOVERGEN:HBG052701 EMBL:U63919
EMBL:BC045089 RefSeq:NP_001080591.1 UniGene:Xl.98 IntAct:Q7ZX96
PRIDE:Q7ZX96 GeneID:380283 KEGG:xla:380283 Xenbase:XB-GENE-5823157
Uniprot:Q7ZX96
Length = 820
Score = 136 (52.9 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 62/232 (26%), Positives = 102/232 (43%)
Query: 113 NIQKIWHLLQTM-----MGEHATVQQTASRKMSL--VIGARRHLEWGHEKYIMDTIQSHP 165
N+ +W +++ M + T++ S +M + V A +LE ++ Y + ++ ++
Sbjct: 220 NVSDLWVMVKQMTDVPLIPASDTLKSRCSGQMQMAFVRQALNYLEQSYKNYTLISVFANL 279
Query: 166 AQAALGGVVGNLQRVRAFLRIRLRDYGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDE 225
QA LGGV G VR+FL IRL + G+ P W IY+C+R G
Sbjct: 280 QQAQLGGVPGTYNLVRSFLNIRLPT-PIPGLQDGEIEGYP----VWALIYYCMRCGDLMA 334
Query: 226 ARNVALSSRASNQ---FAPLLTEWINTGGMVPPEIAAAASEECDKMLRMG-DRVGRAAYD 281
A+ V +RA +Q F E+I+ S + LR+ R RA+ D
Sbjct: 335 AQQVV--NRAQHQLGDFKNCFQEYIHNKDR-------RLSPTTENKLRLHYRRAVRASTD 385
Query: 282 KKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDFLWFKLSAI--RDVPSEAP 331
K +Y II + D + + + ED+LW KLS + D + +P
Sbjct: 386 PYKRAVYCIIG----RCD-VSDNHSEVADKTEDYLWLKLSQVCFEDEANSSP 432
Score = 52 (23.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 30/179 (16%), Positives = 69/179 (38%)
Query: 468 GAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLS 527
G+ + G + ++ D K + + A + GL++++ +L L+ NK LS
Sbjct: 592 GSRKPGAIDKFTRDTKT---IINKVASVAENKGLFEEAAKLYDLAKNPDKVLELTNKLLS 648
Query: 528 EAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILS 587
+ +S + + E N L + + Y + + + T L+ I
Sbjct: 649 PVVSQISAPQSNRERLK-------NMALAIAERYKSQGVSAEKSI--NSTFYLLLDLITF 699
Query: 588 VHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCL 646
+ +GH + + +L +P + V F++ S ++ + ++L + L
Sbjct: 700 FDEY-HAGHIDLSFDVIERLKLVPLSQDSVEERVAAFRNFSDEIRHNLSEILLATMNIL 757
Score = 42 (19.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 17/74 (22%), Positives = 34/74 (45%)
Query: 55 ELVPLANKPLLEKKA-TVYAEVVKNLNNARQQGLPFKPATAFKGAYESLAIESS---SGK 110
EL+ A + E + T V +NL +Q G + T + + ES +++S +
Sbjct: 8 ELLQQAEQLAAETEGVTELPHVERNLQEIQQAGERLRSKTMTRTSQESANVKASVLLGSR 67
Query: 111 SVNIQKIWHLLQTM 124
++I I L+++
Sbjct: 68 GLDISHISQRLESL 81
>UNIPROTKB|Q6NX12 [details] [associations]
symbol:nup93 "Nuclear pore complex protein Nup93"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005643 "nuclear
pore" evidence=ISS] [GO:0017056 "structural constituent of nuclear
pore" evidence=ISS] [GO:0031965 "nuclear membrane" evidence=ISS]
[GO:0034399 "nuclear periphery" evidence=ISS] [GO:0051292 "nuclear
pore complex assembly" evidence=ISS] InterPro:IPR007231
Pfam:PF04097 GO:GO:0015031 GO:GO:0005643 GO:GO:0051028
eggNOG:NOG312233 KO:K14309 PANTHER:PTHR11225 CTD:9688
HOVERGEN:HBG052701 EMBL:BC067327 RefSeq:NP_998879.1
UniGene:Str.1879 STRING:Q6NX12 PRIDE:Q6NX12 GeneID:407948
KEGG:xtr:407948 Xenbase:XB-GENE-5823109 Uniprot:Q6NX12
Length = 820
Score = 132 (51.5 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 55/200 (27%), Positives = 90/200 (45%)
Query: 138 KMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLRDYGVLDFD 197
+M+ + A LE ++ Y + ++ ++ QA LGGV G VR+FL IRL +
Sbjct: 252 QMAFLRQALHFLEQSYKNYTLMSVFANLQQAQLGGVPGTYNLVRSFLNIRL-PAPIPGLQ 310
Query: 198 IGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQ---FAPLLTEWINTGGMVP 254
G+ P W IY+C+R G A+ V +RA +Q F E++++
Sbjct: 311 DGEVEGYP----VWALIYYCMRCGDLMAAQQVV--NRAQHQLGDFKNCFQEYVHSKDR-- 362
Query: 255 PEIAAAASEECDKMLRMG-DRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIE 313
S + LR+ R RA+ D K ++Y II + D + + + E
Sbjct: 363 -----RLSPTTENKLRLHYRRAVRASTDPYKRVVYCIIG----RCD-VTDNHSEVADKTE 412
Query: 314 DFLWFKLSAI--RDVPSEAP 331
D+LW KLS + D + +P
Sbjct: 413 DYLWLKLSQVCFEDEANSSP 432
Score = 55 (24.4 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 31/179 (17%), Positives = 69/179 (38%)
Query: 468 GAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLS 527
G+ + G + ++ D K + + A + GL++++ +L L+ NK LS
Sbjct: 592 GSRKPGAIDKFTRDTKT---IINKVASVAENKGLFEEAAKLYDLAKNPDKVLELTNKLLS 648
Query: 528 EAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILS 587
+ +S + + E N L + + Y + + + T L+ I
Sbjct: 649 PVVSQISAPQSNRERLK-------NMALAIAERYKSQGVSAEKSI--NSTFYLLLDLITF 699
Query: 588 VHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCL 646
+ +GH A + +L +P + V F++ S ++ + ++L + L
Sbjct: 700 FDEY-HAGHVDLAFDVIERLKLVPLSQDSVEERVAAFRNFSDEIRHNLSEILLATMNIL 757
Score = 42 (19.8 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 17/74 (22%), Positives = 34/74 (45%)
Query: 55 ELVPLANKPLLEKKA-TVYAEVVKNLNNARQQGLPFKPATAFKGAYESLAIESS---SGK 110
EL+ A + E + T V +NL +Q G + T + + ES +++S +
Sbjct: 8 ELLQQAEQLAAETEGVTELPHVERNLQEIQQAGERLRSKTMTRTSQESANVKASVLLGSR 67
Query: 111 SVNIQKIWHLLQTM 124
++I I L+++
Sbjct: 68 GLDISHISQRLESL 81
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 687 654 0.00096 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 628 (67 KB)
Total size of DFA: 336 KB (2170 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.02u 0.08s 53.10t Elapsed: 00:00:02
Total cpu time: 53.03u 0.08s 53.11t Elapsed: 00:00:02
Start: Sat May 11 02:43:28 2013 End: Sat May 11 02:43:30 2013