BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039467
(687 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22224|Y2162_ARATH Uncharacterized protein At2g41620 OS=Arabidopsis thaliana
GN=At2g41620 PE=2 SV=2
Length = 861
Score = 1040 bits (2689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/726 (69%), Positives = 592/726 (81%), Gaps = 41/726 (5%)
Query: 1 EDWQKEKRDFLRSLSRISTLPKTNMTDTSTGGTLPGQMASMASSPQISSGPSGMELVPLA 60
EDW+KEKRDFL+SLSRIS LPKTNM DTS GQ+ + SSP++SS P G ELV LA
Sbjct: 138 EDWRKEKRDFLQSLSRISMLPKTNMIDTSREAH-AGQLVPVGSSPRVSSTP-GKELVALA 195
Query: 61 NKPLLEKKATVYAEVVKNLNNARQQGLPFKPATAFKGAYESLAIESSSGKSVNIQKIWHL 120
N P+ EKKA VY EVVK LN +R++G+PF+PA FK AY++L E + GKSVN+QKIW L
Sbjct: 196 NIPIHEKKAYVYGEVVKKLNTSRERGMPFRPAMCFKDAYDTLGAEVTRGKSVNMQKIWQL 255
Query: 121 LQTMMGEHATVQQTASRKMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRV 180
+Q + GE + V+Q S++M+L IGAR HL+ GHEK+IMDTIQ+HP QAALGG VGNLQR+
Sbjct: 256 VQAITGEDSAVRQGVSKRMALAIGARHHLQHGHEKFIMDTIQTHPTQAALGGSVGNLQRI 315
Query: 181 RAFLRIRLRDYGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFA 240
RAFLRIRLRDYGVLDFD D RRQPPVDTTWQQIYFCLRTGYY+EAR +A S+R+S QFA
Sbjct: 316 RAFLRIRLRDYGVLDFDSTDARRQPPVDTTWQQIYFCLRTGYYEEAREIARSTRSSQQFA 375
Query: 241 PLLTEWINTGGMVPPEIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDR 300
PLLTEWI T GMV E AA ASEEC+KMLRMGDR+GR AYDKKKLLLY IISGSRRQI+R
Sbjct: 376 PLLTEWITTDGMVAAESAAIASEECEKMLRMGDRLGRTAYDKKKLLLYTIISGSRRQIER 435
Query: 301 LLRDLPTLFSTIEDFLWFKLSAIRDVPSEAPSVVLSDGLAPYSLDDLQVYLNKFDPSYYT 360
+LRDL TLF+TIEDFLWFKLS IRDV + SVVL+DGLAPYSLDDLQ YLNKF+PSYYT
Sbjct: 436 ILRDLSTLFNTIEDFLWFKLSCIRDVTGGSSSVVLNDGLAPYSLDDLQAYLNKFEPSYYT 495
Query: 361 KNGKDPLVYPYVLLLSIQLLPAVLYLSKESGDEGYNIDAAHISIVLADHG---------- 410
KNGKDPLVYPYVLLLS+QLLPA+++LSKE+GD GYNIDA HI+I L DH
Sbjct: 496 KNGKDPLVYPYVLLLSVQLLPAIMHLSKEAGDGGYNIDAVHIAISLVDHSVLSEGSGTGH 555
Query: 411 -----------------------------MALEYYAQAAAAVGGGQLSWTGRANVDQQRQ 441
M +EYYAQAAA VGGGQL+W+GR+NVDQQRQ
Sbjct: 556 KLSVMDSNAEASSMIRQYGSMFLHHGDLQMTVEYYAQAAATVGGGQLAWSGRSNVDQQRQ 615
Query: 442 KSLMLKQLLTELLLRDGGIYLLLGSRGAGEEGELGRYITDLKARQQFLLEAAGQCQEAGL 501
++LMLKQLLTE+LLR+ GIY LLG+RG+GEEG+LGR+ D + RQQFL+EAA QCQEAGL
Sbjct: 616 RNLMLKQLLTEILLRERGIYFLLGARGSGEEGQLGRFFPDSRLRQQFLVEAAHQCQEAGL 675
Query: 502 YDKSIELQKRVGAFSMALDTINKCLSEAIFAMSRGRLDGESQTASLIHSGNEILEMEKYY 561
YDKSIELQKRVGAFS AL+TINKCLSEAI +++RGRLDGES+T+ LI +GN+ILE KYY
Sbjct: 676 YDKSIELQKRVGAFSAALETINKCLSEAICSLARGRLDGESRTSGLILAGNDILETYKYY 735
Query: 562 PEVSLHEREQVLEQQTVLRQLEAILSVHKMARSGHYLDALREVAKLPFLPFDPRVPDAMV 621
PEVSL ERE+V+EQ+T+LR+LEAILS+HK+ R G++LDALRE+AKLPFL DPR+PDA
Sbjct: 736 PEVSLQERERVMEQETILRELEAILSIHKLGRLGNHLDALREIAKLPFLHLDPRMPDATA 795
Query: 622 DVFQSLSPHVQACVPDLLRVALTCLDNVTDTDGSLRAMRAKIANFLANNMNQNWPRDLYE 681
DVFQS SP+ Q CVPDLL+VALTCLDNV DTDGS+RAMR+KIA FLA+N ++NWPRDLYE
Sbjct: 796 DVFQSASPYFQTCVPDLLKVALTCLDNVPDTDGSIRAMRSKIAGFLASNTHRNWPRDLYE 855
Query: 682 RVARSL 687
+VARS
Sbjct: 856 KVARSF 861
>sp|O94418|MUG87_SCHPO Meiotically up-regulated gene 87 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug87 PE=1 SV=1
Length = 851
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 125/559 (22%), Positives = 230/559 (41%), Gaps = 87/559 (15%)
Query: 145 ARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLRDYGV-LDFDIGDTRR 203
+R+ LE + + I P A +GGV ++RA+L IRL GV ++ D+ +
Sbjct: 264 SRKFLEAQFFEVLNKEIAKTPQAALVGGVPSIRNKIRAYLNIRLLRNGVWINPDLEIIQD 323
Query: 204 QPPVDTTWQQIYFCLRTGYYDEA-----RNVALSSRASNQFAPLLTEWINT-GGMVPPEI 257
P W I++ LR G+ EA N L + + +F + + G++P ++
Sbjct: 324 VP----IWAFIFYLLRCGFLKEAVDFTEENRDLFEKVAEKFPFYINAYAKAPNGILPRQL 379
Query: 258 AAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDFLW 317
+ E ++ +R+ + + D K +Y II + D P++ S ED++W
Sbjct: 380 RSQLFSEFNQTIRLQE-----SSDPYKYAVYKIIG----RCDLSKTSCPSICSVTEDYIW 430
Query: 318 FKLSAIRDVPSEAPSVVLSDGLAPYSLDDLQVYLNKFDPSYYTKNGKDPLVYPYVLLLSI 377
F+L R+ ++ S +SL+D+Q L + Y+T NG +P++Y ++L+L
Sbjct: 431 FQLILSREFTEKSVS-----AHEFFSLEDVQHILLSYGSDYFTNNGSNPVMYFFLLMLCG 485
Query: 378 QLLPAVLYLSKESGDEGYNIDAAHISIVLADHGMALEYYAQAAAAVGGGQL------SWT 431
A+ +L + DA H +I A +G+ + + + G++ + +
Sbjct: 486 LYERAINFLYP-----YFPTDAVHFAITCAYYGLLRTAPSSSVVSNEPGKIQSMLVETKS 540
Query: 432 GRANVDQQR----------------------------QKSLMLKQLLTELLLRDGGIYLL 463
G+ +++ R + M + L L+L L
Sbjct: 541 GKPSLEFDRLLIDYTQTCQELSPVMSACYLIPMCKIDKYISMCHKSLCSLVLSTRDYVNL 600
Query: 464 LGS-RGAGEEG----ELGRYITDLKARQQFL----LEAAGQCQEAGLYDKSIELQKRVGA 514
LG RG GE E R + L + +++L L AA Q + GL +I L
Sbjct: 601 LGDIRGDGERTPSFLENHRSLIGLSSVKEYLSKITLTAAKQADDQGLLSDAILLYHLAED 660
Query: 515 FSMALDTINKCLSEAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLE 574
+ A+ IN+ L A+ LD LI ++++ P SL+ +
Sbjct: 661 YDAAVTVINRRLGSALLRF----LDQFVFPDKLISLTKSMMDVYNRNP--SLYAKVDYKN 714
Query: 575 QQTVLRQLEAILSVHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDV-------FQSL 627
++T L + + + + Y AL + +L LP DP D V F+ L
Sbjct: 715 RETTNLLLLTVEAFNAYT-NKDYEQALSSLQQLEILPLDPLDSDCETFVVRKLAKEFRFL 773
Query: 628 SPHVQACVPDLLRVALTCL 646
+ ++ VP ++ +A+ L
Sbjct: 774 NENLLQNVPGIVLIAMNSL 792
>sp|P34077|NIC96_YEAST Nucleoporin NIC96 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=NIC96 PE=1 SV=2
Length = 839
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 132/640 (20%), Positives = 259/640 (40%), Gaps = 115/640 (17%)
Query: 64 LLEKKATVYAEVVKNLNNARQQGLPFKPATAFKGAYESLAIESSSGKSVNIQKI--WHLL 121
+L +K YA +V NN+RQ F A F ++I SS+ + N Q + W +L
Sbjct: 207 ILREKFENYARIVFQFNNSRQANGNFDIANEF------ISILSSANGTRNAQLLESWKIL 260
Query: 122 QTMMGEHATVQQTASRKMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVR 181
++M S+ +++V +++LE +Y + + + + G+ N+ +++
Sbjct: 261 ESM----------KSKDINIVEVGKQYLEQQFLQYTDNLYKKNMNE----GLATNVNKIK 306
Query: 182 AFLRIRLR----DYGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRAS- 236
+F+ +L+ + + + + + P+ W I++ LR G EA V + ++A+
Sbjct: 307 SFIDTKLKKADKSWKISNLTVING---VPI---WALIFYLLRAGLIKEALQVLVENKANI 360
Query: 237 ----NQFAPLLTEWINTGGM-VPPEIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAII 291
F + ++ +P E + E ++ ++ D +L +Y +I
Sbjct: 361 KKVEQSFLTYFKAYASSKDHGLPVEYSTKLHTEYNQHIK-----SSLDGDPYRLAVYKLI 415
Query: 292 SGSRRQIDRLLRDLPTLFSTIEDFLWFKLSAIRDVPSEAPSVVLSDGLAPYSLDDLQVYL 351
R + R +++P + +IED+LW L I++ +E V YSL+D Q +
Sbjct: 416 G--RCDLSR--KNIPAVTLSIEDWLWMHLMLIKEKDAENDPVY-----ERYSLEDFQNII 466
Query: 352 NKFDPSYYTKNGKDPLVYPYVLLLSIQLLPAVLYLSKESGDEGYNIDAAHISI------- 404
+ PS ++ Y LLLS A+ Y S +DA H++I
Sbjct: 467 ISYGPSRFSN------YYLQTLLLSGLYGLAIDYTYTFS-----EMDAVHLAIGLASLKL 515
Query: 405 ---------------------VLADHGMALEYYAQAAAAVGGGQLSWTGRANVDQQRQKS 443
+LA++ + Y+ AV L D +
Sbjct: 516 FKIDSSTRLTKKPKRDIRFANILANYTKSFR-YSDPRVAVEYLVLITLNEGPTDVE---- 570
Query: 444 LMLKQLLTELLLRDGGIYLLLGSRGAG--------EEGELGRYITDLKARQQFLLE-AAG 494
+ + L EL+L +LLG G EE + ++ D K + E AA
Sbjct: 571 -LCHEALRELVLETKEFTVLLGKIGRDGARIPGVIEERQPLLHVRDEKEFLHTITEQAAR 629
Query: 495 QCQEAGLYDKSIELQKRVGAFSMALDTINKCLSEAIFAMSRGR----LDGESQTASLIHS 550
+ E G SI L + + + + +N LS+ + A + D S+T ++ +
Sbjct: 630 RADEDGRIYDSILLYQLAEEYDIVITLVNSLLSDTLSASDLDQPLVGPDDNSETNPVLLA 689
Query: 551 GNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILSVHKMARSGHYLDALREVAKLPFL 610
M Y + + R+ ++ + + L I S+ ++ + + + L ++ L L
Sbjct: 690 R----RMASIYFDNAGISRQIHVKNKEICMLLLNISSIRELYFNKQWQETLSQMELLDLL 745
Query: 611 PF-DPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCLDNV 649
PF D F +L ++ +P+LL + L+C+ N+
Sbjct: 746 PFSDELSARKKAQDFSNLDDNIVKNIPNLLIITLSCISNM 785
>sp|Q8BJ71|NUP93_MOUSE Nuclear pore complex protein Nup93 OS=Mus musculus GN=Nup93 PE=2
SV=1
Length = 819
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 218/546 (39%), Gaps = 77/546 (14%)
Query: 138 KMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRL--RDYGVLD 195
+M V A +LE ++ Y + T+ + QA LGGV G Q VR+FL I+L G+ D
Sbjct: 251 RMDFVKQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPSPGLQD 310
Query: 196 FDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFAPLLTEWINTGGMVPP 255
G+ P W IY+C+R G A V SRA +Q T W
Sbjct: 311 ---GEVEGHP----VWALIYYCMRCGDLLAASQVV--SRAQHQLGEFKT-WFQEYMNSKD 360
Query: 256 EIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDF 315
+ A+E +K+ R R D K +Y II + + + ED+
Sbjct: 361 RRLSPATE--NKLRLHYRRALRNNTDPYKRAVYCIIGRC-----DITDNQSEVADKTEDY 413
Query: 316 LWFKLSAI--RDVPSEAPSVVLSDGLAPYSLDDLQVYLNKFDPSYYTKNGKDPLVYPYVL 373
LW KL+ + D + +P L+ L+ + + L + S++T N + P +Y VL
Sbjct: 414 LWLKLNQVCFDDDGTSSPQDRLT--LSQFQ----KQLLEDYGESHFTVN-QQPFLYFQVL 466
Query: 374 LLSIQLLPAVLYLSKESGDEGYNIDAAHISIVLADHGMALEYYAQAAAAVGG--GQLSWT 431
L+ Q A+ +L + E A H+++VL + + L+ Q+A + G
Sbjct: 467 FLTAQFEAAIAFLFRM---ERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCM 523
Query: 432 GRANV----------------------------DQQRQKSLMLKQLLTELLLRDGGIYLL 463
R N ++ Q M + ++EL++ ++
Sbjct: 524 RRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMI 583
Query: 464 LG---SRGAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALD 520
LG + G+ + G + ++ +D K + + A + GL++++ +L L+
Sbjct: 584 LGKLENDGSRKPGVIDKFTSDTKP---IINKVASVAENKGLFEEAAKLYDLAKNADKVLE 640
Query: 521 TINKCLSEAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLR 580
+NK LS + +S + + E N L + + Y + + V +
Sbjct: 641 LMNKLLSPVVPQISAPQSNKE-------RLKNMALSIAERYRAQGISANKFV---DSTFY 690
Query: 581 QLEAILSVHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLR 640
L +++ SGH A + +L +P + + V F++ S ++ + ++L
Sbjct: 691 LLLDLITFFDEYHSGHIDRAFDIIDRLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLL 750
Query: 641 VALTCL 646
+ L
Sbjct: 751 ATMNIL 756
>sp|Q66HC5|NUP93_RAT Nuclear pore complex protein Nup93 OS=Rattus norvegicus GN=Nup93
PE=1 SV=1
Length = 819
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 218/546 (39%), Gaps = 77/546 (14%)
Query: 138 KMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRL--RDYGVLD 195
+M V A +LE ++ Y + T+ + QA LGGV G Q VR+FL I+L G+ D
Sbjct: 251 RMDFVKQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPSPGLQD 310
Query: 196 FDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFAPLLTEWINTGGMVPP 255
G+ P W IY+C+R G A V SRA +Q T W
Sbjct: 311 ---GEVEGHP----VWALIYYCMRCGDLLAASQVV--SRAQHQLGEFKT-WFQEYMNSKD 360
Query: 256 EIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDF 315
+ A+E +K+ R R D K +Y II + + + ED+
Sbjct: 361 RRLSPATE--NKLRLHYRRALRNNTDPYKRAVYCIIGRC-----DITDNQSEVADKTEDY 413
Query: 316 LWFKLSAI--RDVPSEAPSVVLSDGLAPYSLDDLQVYLNKFDPSYYTKNGKDPLVYPYVL 373
LW KL+ + D + +P L+ L+ + + L + S++T N + P +Y VL
Sbjct: 414 LWLKLNQVCFDDDGTSSPQDRLT--LSQFQ----KQLLEDYGESHFTVN-QQPFLYFQVL 466
Query: 374 LLSIQLLPAVLYLSKESGDEGYNIDAAHISIVLADHGMALEYYAQAAAAVGG--GQLSWT 431
L+ Q A+ +L + E A H+++VL + + L+ Q+A + G
Sbjct: 467 FLTAQFEAAIAFLFRM---ERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCM 523
Query: 432 GRANV----------------------------DQQRQKSLMLKQLLTELLLRDGGIYLL 463
R N ++ Q M + ++EL++ ++
Sbjct: 524 RRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMI 583
Query: 464 LG---SRGAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALD 520
LG + G+ + G + ++ +D K + + A + GL++++ +L L+
Sbjct: 584 LGKLENDGSRKPGVIDKFTSDTKP---IINKVASVAENKGLFEEAAKLYDLAKNADKVLE 640
Query: 521 TINKCLSEAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLR 580
+NK LS + +S + + E N L + + Y + + V +
Sbjct: 641 LMNKLLSPVVPQISAPQSNKE-------RLKNMALSIAERYRAQGISANKFV---DSTFY 690
Query: 581 QLEAILSVHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLR 640
L +++ SGH A + +L +P + + V F++ S ++ + ++L
Sbjct: 691 LLLDLITFFDEYHSGHIDRAFDIIDRLKLVPLNQESMEERVAAFRNFSDEIRHNLSEVLL 750
Query: 641 VALTCL 646
+ L
Sbjct: 751 ATMNIL 756
>sp|A5PJZ5|NUP93_BOVIN Nuclear pore complex protein Nup93 OS=Bos taurus GN=NUP93 PE=2 SV=1
Length = 819
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 122/578 (21%), Positives = 229/578 (39%), Gaps = 84/578 (14%)
Query: 113 NIQKIWHLLQTMMG-------EHATVQQTASRKMSLVIGARRHLEWGHEKYIMDTIQSHP 165
NI +W +++ M + + + +M V A +LE ++ Y + T+ +
Sbjct: 219 NISDMWAMVKQMTDVLLVPATDALKSRNSVEVRMEFVRQALGYLEQSYKNYTLVTVFGNL 278
Query: 166 AQAALGGVVGNLQRVRAFLRIRLRD--YGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYY 223
QA LGGV G Q VR+FL I+L G+ D G+ P W IY+C+R G
Sbjct: 279 HQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQD---GEVEGHP----VWALIYYCMRCGDL 331
Query: 224 DEARNVALSSRASNQFAPLLTEWINTGGMVPPEIAAAASEECDKMLRMGDRVGRAAYDKK 283
A V +RA +Q T W + A+E +K+ R R D
Sbjct: 332 LAASQVV--NRAQHQLGEFKT-WFQEYMNSKDRRLSPATE--NKLRLHYRRALRNNTDPY 386
Query: 284 KLLLYAIISGSRRQIDRLLRDLPTLFSTIEDFLWFKLSAI--RDVPSEAPSVVLSDGLAP 341
K +Y II + + + ED+LW KL+ + D + +P L+ L+
Sbjct: 387 KRAVYCIIGRC-----DVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLT--LSQ 439
Query: 342 YSLDDLQVYLNKFDPSYYTKNGKDPLVYPYVLLLSIQLLPAVLYLSKESGDEGYNIDAAH 401
+ + L + S++T N + P +Y VL L+ Q A+ +L + E A H
Sbjct: 440 FQ----KQLLEDYGESHFTVN-QQPFLYFQVLFLTAQFEAAIAFLFRM---ERLRCHAVH 491
Query: 402 ISIVLADHGMALEYYAQAAAAVGG--GQLSWTGRANV----------------------- 436
+++VL + + L+ Q+A + G R N
Sbjct: 492 VALVLFELKLLLKSSGQSAQLLSHEPGDPPCMRRLNFVRLLMLYTRKFESTDPREALQYF 551
Query: 437 -----DQQRQKSLMLKQLLTELLLRDGGIYLLLG---SRGAGEEGELGRYITDLKARQQF 488
++ Q M + ++EL++ ++LG + G+ + G + ++ +D K
Sbjct: 552 YFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKP---I 608
Query: 489 LLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLSEAIFAMSRGRLDGESQTASLI 548
+ + A + GL++++ +L L+ +NK LS + +S + + E
Sbjct: 609 INKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPIVPQISAPQSNKE------- 661
Query: 549 HSGNEILEMEKYYPEVSLHEREQVLEQQTVLRQLEAILSVHKMARSGHYLDALREVAKLP 608
N L + + Y + + V + L +++ SGH A + +L
Sbjct: 662 RLKNMALSIAERYRAQGISANKFV---DSTFYLLLDLITFFDEYHSGHIDRAFDIIDRLK 718
Query: 609 FLPFDPRVPDAMVDVFQSLSPHVQACVPDLLRVALTCL 646
+P + + V F++ S ++ + ++L + L
Sbjct: 719 LVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNIL 756
>sp|Q8N1F7|NUP93_HUMAN Nuclear pore complex protein Nup93 OS=Homo sapiens GN=NUP93 PE=1
SV=2
Length = 819
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 218/546 (39%), Gaps = 77/546 (14%)
Query: 138 KMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLRD--YGVLD 195
+M V A +LE ++ Y + T+ + QA LGGV G Q VR+FL I+L G+ D
Sbjct: 251 RMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQD 310
Query: 196 FDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFAPLLTEWINTGGMVPP 255
G+ P W IY+C+R G A V +RA +Q T W
Sbjct: 311 ---GEVEGHP----VWALIYYCMRCGDLLAASQVV--NRAQHQLGEFKT-WFQEYMNSKD 360
Query: 256 EIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDF 315
+ A+E +K+ R R D K +Y II + + + ED+
Sbjct: 361 RRLSPATE--NKLRLHYRRALRNNTDPYKRAVYCIIGRC-----DVTDNQSEVADKTEDY 413
Query: 316 LWFKLSAI--RDVPSEAPSVVLSDGLAPYSLDDLQVYLNKFDPSYYTKNGKDPLVYPYVL 373
LW KL+ + D + +P L+ L+ + + L + S++T N + P +Y VL
Sbjct: 414 LWLKLNQVCFDDDGTSSPQDRLT--LSQFQ----KQLLEDYGESHFTVN-QQPFLYFQVL 466
Query: 374 LLSIQLLPAVLYLSKESGDEGYNIDAAHISIVLADHGMALEYYAQAAAAVGG--GQLSWT 431
L+ Q AV +L + E A H+++VL + + L+ Q+A + G
Sbjct: 467 FLTAQFEAAVAFLFRM---ERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCL 523
Query: 432 GRANV----------------------------DQQRQKSLMLKQLLTELLLRDGGIYLL 463
R N ++ Q M + ++EL++ ++
Sbjct: 524 RRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMI 583
Query: 464 LG---SRGAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALD 520
LG + G+ + G + ++ +D K + + A + GL++++ +L L+
Sbjct: 584 LGKLENDGSRKPGVIDKFTSDTKP---IINKVASVAENKGLFEEAAKLYDLAKNADKVLE 640
Query: 521 TINKCLSEAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLR 580
+NK LS + +S + + E N L + + Y + + V +
Sbjct: 641 LMNKLLSPVVPQISAPQSNKE-------RLKNMALSIAERYRAQGISANKFV---DSTFY 690
Query: 581 QLEAILSVHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLR 640
L +++ SGH A + +L +P + + V F++ S ++ + ++L
Sbjct: 691 LLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLL 750
Query: 641 VALTCL 646
+ L
Sbjct: 751 ATMNIL 756
>sp|Q5R822|NUP93_PONAB Nuclear pore complex protein Nup93 OS=Pongo abelii GN=NUP93 PE=2
SV=2
Length = 819
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 118/546 (21%), Positives = 218/546 (39%), Gaps = 77/546 (14%)
Query: 138 KMSLVIGARRHLEWGHEKYIMDTIQSHPAQAALGGVVGNLQRVRAFLRIRLRD--YGVLD 195
+M V A +LE ++ Y + T+ + QA LGGV G Q VR+FL I+L G+ D
Sbjct: 251 RMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQD 310
Query: 196 FDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRASNQFAPLLTEWINTGGMVPP 255
G+ P W IY+C+R G A V +RA +Q T W
Sbjct: 311 ---GEVEGHP----VWALIYYCMRCGDLLAASQVV--NRAQHQLGEFKT-WFQEYMNSKD 360
Query: 256 EIAAAASEECDKMLRMGDRVGRAAYDKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDF 315
+ A+E +K+ R R D K +Y II + + + ED+
Sbjct: 361 RRLSPATE--NKLRLHYRRALRNNTDPYKRAVYCIIGRC-----DVTDNQSEVADKTEDY 413
Query: 316 LWFKLSAI--RDVPSEAPSVVLSDGLAPYSLDDLQVYLNKFDPSYYTKNGKDPLVYPYVL 373
LW KL+ + D + +P L+ L+ + + L + S++T N + P +Y VL
Sbjct: 414 LWLKLNQVCFDDDGTSSPQDRLT--LSQFQ----KQLLEDYGESHFTVN-QQPFLYFQVL 466
Query: 374 LLSIQLLPAVLYLSKESGDEGYNIDAAHISIVLADHGMALEYYAQAAAAVGG--GQLSWT 431
L+ Q A+ +L + E A H+++VL + + L+ Q+A + G
Sbjct: 467 FLTAQFEAAIAFLFRM---ERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCM 523
Query: 432 GRANV----------------------------DQQRQKSLMLKQLLTELLLRDGGIYLL 463
R N ++ Q M + ++EL++ ++
Sbjct: 524 RRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMI 583
Query: 464 LG---SRGAGEEGELGRYITDLKARQQFLLEAAGQCQEAGLYDKSIELQKRVGAFSMALD 520
LG + G+ + G + ++ +D K + + A + GL++++ +L L+
Sbjct: 584 LGKLENDGSRKPGVIDKFTSDTKP---IINKVASVAENKGLFEEAAKLYDLAKNADKVLE 640
Query: 521 TINKCLSEAIFAMSRGRLDGESQTASLIHSGNEILEMEKYYPEVSLHEREQVLEQQTVLR 580
+NK LS + +S + + E N L + + Y + + V +
Sbjct: 641 LMNKLLSPVVPQISAPQSNKE-------RLKNMALSIAERYRAQGISANKFV---DSTFY 690
Query: 581 QLEAILSVHKMARSGHYLDALREVAKLPFLPFDPRVPDAMVDVFQSLSPHVQACVPDLLR 640
L +++ SGH A + +L +P + + V F++ S ++ + ++L
Sbjct: 691 LLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLL 750
Query: 641 VALTCL 646
+ L
Sbjct: 751 ATMNIL 756
>sp|Q7ZU29|NUP93_DANRE Nuclear pore complex protein Nup93 OS=Danio rerio GN=dye PE=2 SV=1
Length = 820
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 197/474 (41%), Gaps = 76/474 (16%)
Query: 113 NIQKIWHLLQTMMG-------EHATVQQTASRKMSLVIGARRHLEWGHEKYIMDTIQSHP 165
N+ ++W +++ M + + + +M+ V A + LE ++ Y + T+ +
Sbjct: 220 NVSEMWLMVKQMTDVLLVPAKDTLKSRVSVDMQMAFVRQALQFLENSYKNYTLVTVFGNL 279
Query: 166 AQAALGGVVGNLQRVRAFLRIRLRD--YGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYY 223
QA LGGV G Q V +FL I+L G D G+ P W IYFCLR G
Sbjct: 280 HQAQLGGVPGTYQLVCSFLNIKLPTPLPGRQD---GEVEGHP----VWALIYFCLRCGDL 332
Query: 224 DEARNVALSSRASNQ---FAPLLTEWINTGGMVPPEIAAAASEECDKMLRMGDRVGRAAY 280
A V ++A +Q F E++N+ P + A+E +K+ RV R +
Sbjct: 333 SAAMQVV--NKAQHQLGDFKIWFQEYMNS----PDRRLSPATE--NKLRLHYRRVLRNSA 384
Query: 281 DKKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDFLWFKLSAIRDVPSEAPSVVLSDGLA 340
D K +Y +I + + + ED+LW KL+ + E S D +
Sbjct: 385 DPYKRAVYCLIGKC-----DIGDNHGEVADKTEDYLWLKLNQV--CFDEDGSSSPQDRMT 437
Query: 341 PYSLDDLQVYLNKFDPSYYTKNGKDPLVYPYVLLLSIQLLPAVLYLSKESGDEGYNIDAA 400
L + L + S+++ + + P +Y VL L+ Q A+ +L + E A
Sbjct: 438 LAQLQ--KQLLEDYGESHFSASHQ-PFLYFQVLFLTAQFEAAIAFLFRV---ERLRSHAV 491
Query: 401 HISIVLADHGMALEYYAQAAAAVG--GGQLSWTGRANV---------------------- 436
H+++VL + + L+ Q+A + G R N
Sbjct: 492 HVALVLYELKLLLKSSGQSAQLLSQEAGDPPMVRRLNFIRLLMLYTRKFESTDPREALQY 551
Query: 437 ------DQQRQKSLMLKQLLTELLLRDGGIYLLLG---SRGAGEEGELGRYITDLKARQQ 487
++ Q M + ++EL++ +LLG G+ + G + ++ D +A
Sbjct: 552 FYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVIDKFAGDTRA--- 608
Query: 488 FLLEAAGQCQEAGLYDKSIELQKRVGAFSMALDTINKCLSEAIFAMSRGRLDGE 541
+ + A + + GL++++++L + L+ +NK LS I +S + + E
Sbjct: 609 IITKVASEAENKGLFEEAVKLYELAKNADKVLELMNKLLSPVIAQVSEPQSNKE 662
>sp|Q7ZX96|NUP93_XENLA Nuclear pore complex protein Nup93 OS=Xenopus laevis GN=nup93 PE=2
SV=1
Length = 820
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 122/292 (41%), Gaps = 49/292 (16%)
Query: 113 NIQKIWHLLQTMM-------GEHATVQQTASRKMSLVIGARRHLEWGHEKYIMDTIQSHP 165
N+ +W +++ M + + + +M+ V A +LE ++ Y + ++ ++
Sbjct: 220 NVSDLWVMVKQMTDVPLIPASDTLKSRCSGQMQMAFVRQALNYLEQSYKNYTLISVFANL 279
Query: 166 AQAALGGVVGNLQRVRAFLRIRLRDYGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDE 225
QA LGGV G VR+FL IRL + G+ P W IY+C+R G
Sbjct: 280 QQAQLGGVPGTYNLVRSFLNIRL-PTPIPGLQDGEIEGYP----VWALIYYCMRCGDLMA 334
Query: 226 ARNVALSSRASNQ---FAPLLTEWI-NTGGMVPPEIAAAASEECDKMLRMGDRVGRAAYD 281
A+ V +RA +Q F E+I N + P +K+ R RA+ D
Sbjct: 335 AQQVV--NRAQHQLGDFKNCFQEYIHNKDRRLSPTTE-------NKLRLHYRRAVRASTD 385
Query: 282 KKKLLLYAIISGSRRQIDRLLRDLPTLFSTI----EDFLWFKLSAI--RDVPSEAPSVVL 335
K +Y II D+ S + ED+LW KLS + D + +P L
Sbjct: 386 PYKRAVYCIIGRC---------DVSDNHSEVADKTEDYLWLKLSQVCFEDEANSSPQDRL 436
Query: 336 SDGLAPYSLDDLQVYL-NKFDPSYYTKNGKDPLVYPYVLLLSIQLLPAVLYL 386
+L Q L + S++ N + P +Y VL L+ Q A+ +L
Sbjct: 437 -------TLPQFQKQLFEDYGESHFAVN-QQPYLYFQVLFLTAQFEAAIAFL 480
>sp|Q6NX12|NUP93_XENTR Nuclear pore complex protein Nup93 OS=Xenopus tropicalis GN=nup93
PE=2 SV=1
Length = 820
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 113 NIQKIWHLLQTMM-------GEHATVQQTASRKMSLVIGARRHLEWGHEKYIMDTIQSHP 165
N+ +W +++ M + + + +M+ + A LE ++ Y + ++ ++
Sbjct: 220 NVSDLWVMVKQMTDVPLIPASDSLKSRCSVQMQMAFLRQALHFLEQSYKNYTLMSVFANL 279
Query: 166 AQAALGGVVGNLQRVRAFLRIRLRDYGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDE 225
QA LGGV G VR+FL IRL + G+ P W IY+C+R G
Sbjct: 280 QQAQLGGVPGTYNLVRSFLNIRL-PAPIPGLQDGEVEGYP----VWALIYYCMRCGDLMA 334
Query: 226 ARNVALSSRASNQ---FAPLLTEWINTGGMVPPEIAAAASEECDKMLRMG-DRVGRAAYD 281
A+ V +RA +Q F E++++ S + LR+ R RA+ D
Sbjct: 335 AQQVV--NRAQHQLGDFKNCFQEYVHSKD-------RRLSPTTENKLRLHYRRAVRASTD 385
Query: 282 KKKLLLYAIISGSRRQIDRLLRDLPTLFSTIEDFLWFKLSAI--RDVPSEAPSVVLSDGL 339
K ++Y II + + + ED+LW KLS + D + +P L
Sbjct: 386 PYKRVVYCIIGRC-----DVTDNHSEVADKTEDYLWLKLSQVCFEDEANSSPQDRL---- 436
Query: 340 APYSLDDLQVYL-NKFDPSYYTKNGKDPLVYPYVLLLSIQLLPAVLYL 386
+L Q L + S++ N + P +Y VL L+ Q A+ +L
Sbjct: 437 ---TLPQFQKQLFEDYGESHFAVN-QQPYLYFQVLFLTAQFEAAIAFL 480
>sp|O14310|NP106_SCHPO Nucleoporin npp106 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=npp106 PE=1 SV=1
Length = 933
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 145/369 (39%), Gaps = 54/369 (14%)
Query: 67 KKATVYAEVVKNLNNARQQGLPFKPATAFKGAYESLAIESSSGKSVNIQKIWHLLQTMMG 126
+KA+ +A V LN AR + + F + + E + + W LL M+
Sbjct: 247 EKASSFAAAVHKLNEARIRNQACHVWSLFASVSQMVNTEV-----IQLFDAWSLLAHMID 301
Query: 127 E------HATVQQTASRKMSLVIGARRHLEWGHEKYI----MDTIQSHPAQAALGGVVGN 176
E + A S + ++ G KY+ + I H + A V +
Sbjct: 302 ETRYGMGDFEARHLALDSSSAALAVEKNCIEGSLKYLENQFLSLIDLHLSDAGHITTVNS 361
Query: 177 LQRVRAFLRIRLRDYGVLDFDIGDTRRQPPVDTTWQQIYFCLRTGYYDEARNVALSSRAS 236
+++V A+ ++R G P+ W +++ +R+G D A + + S
Sbjct: 362 VEKVIAYSKLRFYKNGSWIKSTVSVVNDVPL---WVVLFYLMRSGQLDAA--LQFVNTYS 416
Query: 237 NQFAPLLTEWINTGGMVPPEIAAAA---SEECDKMLRMGDRVGRAAYDKKKLLLYAIISG 293
+ F L G P + A S K LR DR+ +A Y + L+ YA
Sbjct: 417 DDFEKL-------GRSFPLYFYSYAKNPSLPLPKQLR--DRL-QAEYGQ--LMKYAPEDP 464
Query: 294 SRRQIDRLLRD-------LPTLFSTIEDFLWFKLSAIRDVPSEAPSVVLSDG----LAPY 342
+ I +LL + LP + T ED++W +L R V+ S+G + +
Sbjct: 465 FKHAIYKLLGNCEPHRVSLPEVCVTSEDYMWIQLMFCR---VNQNDVIDSNGGQSTNSLF 521
Query: 343 SLDDLQVYLNKFDPSYYTKNGKDPLVYPYVLLLSIQLLPAVLYLSKESGDEGYNIDAAHI 402
+L L+ + F P Y+ P Y LL+ + A+ +L Y ++A H
Sbjct: 522 NLYQLEKKIVAFGPRYFNPKNNTPTNYFLALLMCGEFERAISFLHT-----NYPVEATHF 576
Query: 403 SIVLADHGM 411
++ +A +G+
Sbjct: 577 AVAMAYYGL 585
>sp|Q97MD1|LDH1_CLOAB L-lactate dehydrogenase 1 OS=Clostridium acetobutylicum (strain
ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=ldh1 PE=3 SV=1
Length = 313
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 248 NTGGMVPPEIAAAASEECDKMLR--MGDRVGRAAY---DKKKLLLYAIISGSRRQIDRLL 302
N GM E A+ ++CD L+ + D V AAY +KK YA+ +R ++ +L
Sbjct: 188 NIAGMDVNEYCEASCKKCDGSLKYKIYDDVKNAAYHVIEKKGATYYAVALAVKRIVEAIL 247
Query: 303 RDLPTLFSTIEDFLWFKLSAIRDVPSEAPSVVLSDGLAPYSLDDLQVYLNKFDPSYYTKN 362
RD ++ T+ L + I+DV PS+V +G+ D ++V LN + + T +
Sbjct: 248 RDENSIL-TVSSLLEGQY-GIKDVYMGVPSIVGINGVK----DIIEVPLNDEEKNNLTDS 301
Query: 363 GK 364
K
Sbjct: 302 AK 303
>sp|P45575|DSVB_DESVH Sulfite reductase, dissimilatory-type subunit beta OS=Desulfovibrio
vulgaris (strain Hildenborough / ATCC 29579 / NCIMB
8303) GN=dsvB PE=1 SV=3
Length = 381
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 379 LLPAVLYLSKESGDEGYNIDAAHISIVLADHGMALEYYAQAAAAVGGGQLSWTGRANVDQ 438
L P VL ESGD+ Y + ++ H + A GG L +T R NV+
Sbjct: 47 LEPGVLMHVAESGDKVYTVRVGAARLMSITH---IREMCDIADKYCGGHLRFTTRNNVEF 103
Query: 439 QRQKSLMLKQLLTELLLR--DGG-IYLLLGSRGAG 470
LK L +L R DGG + +G GAG
Sbjct: 104 MVADEASLKALKEDLASRKFDGGSLKFPIGGTGAG 138
>sp|P06694|TNP2_ECOLX Transposase for transposon Tn21 OS=Escherichia coli GN=tnpA PE=3
SV=1
Length = 988
Score = 33.5 bits (75), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Query: 563 EVSLHEREQVLEQQTVLRQLEAILSVHKMARSGHYLDALREVAKLPFLPFDPRVPD---A 619
E LHER +LE Q + +V++MA + DA+ + L P D VPD A
Sbjct: 513 EQYLHERLTLLEAQ--------LATVNRMAAANDLPDAIITESGLKITPLDAAVPDTAQA 564
Query: 620 MVDVFQSLSPHVQ 632
++D + PHV+
Sbjct: 565 LIDQTAMVLPHVK 577
>sp|Q8EQV1|PYRH_OCEIH Uridylate kinase OS=Oceanobacillus iheyensis (strain DSM 14371 /
JCM 11309 / KCTC 3954 / HTE831) GN=pyrH PE=3 SV=1
Length = 240
Score = 33.5 bits (75), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 383 VLYLSKE--SGDEGYNIDAAHISIVLADHGMALEYYAQAAAAVGGGQLSWTGRANVDQQR 440
VL LS E SGD+GY ID I + + + A VGGG + W G+ +
Sbjct: 10 VLKLSGEALSGDQGYGIDPKVIQSISKQVKEVADLGVEVAIVVGGGNI-WRGKVGSEMGM 68
Query: 441 QKSL-----MLKQLLTELLLRDG 458
++ ML ++ L L+DG
Sbjct: 69 DRASADYMGMLATIMNSLALQDG 91
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 244,892,194
Number of Sequences: 539616
Number of extensions: 10055273
Number of successful extensions: 26705
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 26668
Number of HSP's gapped (non-prelim): 31
length of query: 687
length of database: 191,569,459
effective HSP length: 124
effective length of query: 563
effective length of database: 124,657,075
effective search space: 70181933225
effective search space used: 70181933225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)