BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039468
(1282 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SSQ4|FRS6_ARATH Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6 PE=2
SV=1
Length = 703
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 28/185 (15%)
Query: 867 TNPGSVVTLSTREDLSFHHLFVA-----LHASLYGFQNGCRPLIFLDSFPIKSKYQSSLL 921
TNP + ++ ++F A + S +G +IF+DS I K++ L+
Sbjct: 261 TNPNFFYLMDVNDEGQLRNVFWADAFSKVSCSYFG------DVIFIDSSYISGKFEIPLV 314
Query: 922 TATALDGNDEIFPVAFGVVDAVSDDNWHWFLLQLKSALSTCQSITFVTDRLGQLRASILS 981
T T ++ + + ++ G + + +++HW LL++ ++ T VTDR L A+I
Sbjct: 315 TFTGVNHHGKTTLLSCGFLAGETMESYHW-LLKVWLSVMKRSPQTIVTDRCKPLEAAISQ 373
Query: 982 VFENSYYCYCLHHLTEELKRDLKGSYTEEVVSVIVAHLYDAAQAGTLDEFSKFI-DSIKS 1040
VF S+ + L H+ ++ L G H YDA + F+K + +++K
Sbjct: 374 VFPRSHQRFSLTHIMRKIPEKLGG-----------LHNYDAVRKA----FTKAVYETLKV 418
Query: 1041 VSSEA 1045
V EA
Sbjct: 419 VEFEA 423
>sp|Q6NQJ7|FRS4_ARATH Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4 PE=2
SV=2
Length = 732
Score = 40.4 bits (93), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 144/363 (39%), Gaps = 45/363 (12%)
Query: 863 KILETNPGSVVTLSTREDLSFHHLFVALHASLYGFQNGCRPLIFLDSFPIKSKYQSSLLT 922
++ E NP + ED ++F + +++ + F S+ + SKY+ L+
Sbjct: 172 RMQEENPKFFFAVDFSEDHLLRNVFWVDAKGIEDYKSFSDVVSFETSYFV-SKYKVPLVL 230
Query: 923 ATALDGNDEIFPVAFGVVDAVSDDN---WHWFLLQLKSALSTCQSITFVTDRLGQLRASI 979
+ N + PV G ++DD + W + A+ + +TD+ ++A+I
Sbjct: 231 FVGV--NHHVQPVLLGC-GLLADDTVYTYVWLMQSWLVAMGGQKPKVMLTDQNNAIKAAI 287
Query: 980 LSVFENSYYCYCLHHLTEELKRDLK--GSYTEEVVSVIVAHLYDAAQAGTLDEFSKFIDS 1037
+V + +CYCL H+ ++L R+L + + + + +Y + D +++
Sbjct: 288 AAVLPETRHCYCLWHVLDQLPRNLDYWSMWQDTFMKKLFKCIYRSWSEEEFDR--RWLKL 345
Query: 1038 IKSVSSEAFDWI--LRSEPENWANALFKGSRHNQMTSHI-AESFYCWVGEL--PELPIVQ 1092
I W+ L E + WA +G ++ +ES PE + +
Sbjct: 346 IDKFHLRDVPWMRSLYEERKFWAPTFMRGITFAGLSMRCRSESVNSLFDRYVHPETSLKE 405
Query: 1093 IISTICRKIMELMYSR--RMDSNQW-----LTKLTPSLEDKL---QNEMLKTHSLQVLLG 1142
+ ++E Y + D + W L +P + L +E+ + L+VL
Sbjct: 406 FLEGYGL-MLEDRYEEEAKADFDAWHEAPELKSPSPFEKQMLLVYSHEIFRRFQLEVLGA 464
Query: 1143 L----------GSSFEVRGLGTFNVVNIDVWD-------CNCRGWQLNGFPCVHAAAVLQ 1185
G+++ V+ +D WD C+CR ++ G+ C HA VLQ
Sbjct: 465 AACHLTKESEEGTTYSVKDFDDEQKYLVD-WDEFKSDIYCSCRSFEYKGYLCRHAIVVLQ 523
Query: 1186 HVG 1188
G
Sbjct: 524 MSG 526
>sp|Q43531|CCAMK_LILLO Calcium and calcium/calmodulin-dependent serine/threonine-protein
kinase OS=Lilium longiflorum GN=CCAMK PE=1 SV=1
Length = 520
Score = 37.7 bits (86), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
Query: 348 CPPYHITPHNKKIYRNDTANFPYGAYHYYCAPGNAQHLEQPVDTCDPYSNPQAQEIVQLL 407
CPP+H + +K R +F + + + +A+ L + + DPY P A + LL
Sbjct: 241 CPPFHAPSNREKQQRILAGDFSFEEHTWKTITSSAKDLISSLLSVDPYKRPTAND---LL 297
Query: 408 PHPIWAEYGYPTKKGQGWVGDARTWELDVGGLSSRLYFY 446
HP W +GD+ EL + SRL +
Sbjct: 298 KHP-WV------------IGDSAKQELIEPEVVSRLRSF 323
>sp|Q6K5K2|Y2982_ORYSJ B3 domain-containing protein Os02g0598200 OS=Oryza sativa subsp.
japonica GN=Os02g0598200 PE=2 SV=1
Length = 1048
Score = 37.4 bits (85), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 599 ITISGDKDIRRLIDFHEDSGTVDVYVMVGE----KPTDDALTNPCSRSSRTTGAESVTPS 654
+TI+ KD+ R++D +V + +G +P + ++ CS + +T G+E +TP+
Sbjct: 632 VTINTQKDLERVVDGVCCESSVALNNKMGNLILGEPKNKNISPACS-TEKTNGSE-ITPT 689
Query: 655 DNLIPLPSVSGDMVLLNTLFPAASDAGDTR--QLSNSAPAGSD 695
+IPL + D V LNTL D TR +L+ + P S+
Sbjct: 690 TGVIPLTQENIDTVKLNTLSCFEEDRSTTRESELAAAIPTTSE 732
>sp|O14344|IMDH_SCHPO Inosine-5'-monophosphate dehydrogenase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=gua1 PE=2 SV=1
Length = 524
Score = 35.8 bits (81), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 609 RLIDFHEDSGTVDVYVMVGEKPTDDALT----------NPCSRSSRTTGAESVTPSDNLI 658
R + FH+D+ T VM P ++ +T N R S+ V DNL+
Sbjct: 168 RDVQFHKDTNTPVTEVMT---PREELITTAEGISLERANEMLRKSKKGKLPVVDKDDNLV 224
Query: 659 PLPSVSGDMVLLNTLFPAASDAGDTRQLSNSAPAGS 694
L S++ ++ N FP AS DT+QL +A G+
Sbjct: 225 ALLSLTD--LMKNLHFPLASKTSDTKQLMVAAAIGT 258
>sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2
SV=1
Length = 788
Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 88/200 (44%), Gaps = 8/200 (4%)
Query: 808 LEAPKCKPKEIAEEIRRDFG--IELGYVKAWRALENARGESQVSYKDSYNQLPWLVDKIL 865
L+A P+ I + +++G ++G+ + R Q S + L + ++
Sbjct: 203 LQAAGMGPRRIMSALIKEYGGISKVGFTEV-DCRNYMRNNRQKSIEGEIQLLLDYLRQMN 261
Query: 866 ETNPGSVVTLSTREDLSFHHLFVALHASLYGFQNGCRPLIFLDSFPIKSKYQSSLLTATA 925
NP ++ ED S ++F A ++ F + + F D+ ++Y+ T
Sbjct: 262 ADNPNFFYSVQGSEDQSVGNVFWADPKAIMDFTHFGDTVTF-DTTYRSNRYRLPFAPFTG 320
Query: 926 LDGNDEIFPVAFGVVDAVSDD--NWHWFLLQLKSALSTCQSITFVTDRLGQLRASILSVF 983
++ + + P+ FG +++ ++ W +A+S ++ TD +RA+I+ VF
Sbjct: 321 VNHHGQ--PILFGCAFIINETEASFVWLFNTWLAAMSAHPPVSITTDHDAVIRAAIMHVF 378
Query: 984 ENSYYCYCLHHLTEELKRDL 1003
+ + +C H+ ++ + L
Sbjct: 379 PGARHRFCKWHILKKCQEKL 398
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 513,577,637
Number of Sequences: 539616
Number of extensions: 23351677
Number of successful extensions: 50545
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 50532
Number of HSP's gapped (non-prelim): 27
length of query: 1282
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1153
effective length of database: 121,958,995
effective search space: 140618721235
effective search space used: 140618721235
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)