Query 039469
Match_columns 329
No_of_seqs 153 out of 1152
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 17:05:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039469.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039469hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 3.4E-63 1.2E-67 479.2 29.8 308 2-329 6-334 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 3.5E-62 1.2E-66 469.7 28.8 311 2-329 3-319 (421)
3 2xr7_A Malonyltransferase; xen 100.0 4.2E-58 1.4E-62 445.4 24.6 313 4-329 2-350 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 7.8E-57 2.7E-61 436.5 26.6 311 2-329 5-348 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 1.8E-48 6.2E-53 377.5 21.3 292 25-329 5-336 (451)
6 1q9j_A PAPA5, polyketide synth 99.0 6.6E-08 2.3E-12 91.2 22.5 266 23-328 6-308 (422)
7 1l5a_A Amide synthase, VIBH; n 98.5 1.4E-05 4.6E-10 75.7 21.6 235 55-328 33-299 (436)
8 2jgp_A Tyrocidine synthetase 3 98.5 1.3E-05 4.5E-10 77.8 21.8 264 22-328 94-395 (520)
9 4hvm_A Tlmii; PSI-biology, mid 98.4 1.2E-05 4.2E-10 77.5 18.3 269 23-328 12-322 (493)
10 2xhg_A Tyrocidine synthetase A 98.4 8.4E-05 2.9E-09 70.8 22.6 271 22-328 15-330 (466)
11 2vsq_A Surfactin synthetase su 98.0 6.9E-05 2.4E-09 80.9 14.8 240 55-328 47-322 (1304)
12 3fot_A 15-O-acetyltransferase; 97.3 0.0025 8.6E-08 62.0 12.9 153 146-310 177-365 (519)
13 3cla_A Type III chloramphenico 71.4 3.6 0.00012 34.7 4.0 44 132-175 164-209 (213)
14 2i9d_A Chloramphenicol acetylt 70.8 3.8 0.00013 34.7 4.1 43 132-174 172-216 (217)
15 1q23_A Chloramphenicol acetylt 69.7 4.1 0.00014 34.5 4.0 44 132-175 168-213 (219)
16 3rqc_A Probable lipoamide acyl 68.0 3.9 0.00013 34.8 3.6 30 147-176 187-216 (224)
17 1scz_A E2, dihydrolipoamide su 66.4 5.2 0.00018 34.2 4.0 29 147-175 196-224 (233)
18 1dpb_A Dihydrolipoyl-transacet 66.4 5.1 0.00018 34.5 4.0 29 147-175 208-236 (243)
19 3b8k_A PDCE2;, dihydrolipoylly 65.6 4.7 0.00016 34.6 3.6 29 147-175 204-232 (239)
20 2ii3_A Lipoamide acyltransfera 65.1 5.6 0.00019 34.7 4.0 29 147-175 224-252 (262)
21 3mae_A 2-oxoisovalerate dehydr 59.5 8.2 0.00028 33.5 4.0 30 147-176 210-239 (256)
22 3l60_A Branched-chain alpha-ke 57.9 9.1 0.00031 33.1 4.0 29 147-175 205-233 (250)
23 2k1o_A Putative; repressor, tr 44.8 61 0.0021 20.9 5.8 49 211-273 14-62 (66)
24 4hhu_A OR280; engineered prote 42.1 35 0.0012 25.6 4.4 41 40-87 84-129 (170)
25 4hhu_A OR280; engineered prote 39.1 40 0.0014 25.3 4.4 39 42-87 5-48 (170)
26 3dva_I Dihydrolipoyllysine-res 36.4 7.4 0.00025 36.5 0.0 28 148-175 392-419 (428)
27 2kl8_A OR15; structural genomi 34.1 1E+02 0.0034 20.4 5.2 33 55-87 10-47 (85)
28 1x93_A Hypothetical protein HP 33.1 89 0.003 19.4 5.1 39 213-265 2-40 (55)
29 2xl1_A Arginine attenuator pep 20.2 48 0.0016 17.1 1.3 19 244-262 6-24 (26)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=3.4e-63 Score=479.20 Aligned_cols=308 Identities=23% Similarity=0.350 Sum_probs=259.5
Q ss_pred CcEEEEeeeEEeCCCCCCCCCceeccCcCccccccccccEEEEecCCCCCCcccchHHHHHHHHHhhhhhccCCceec--
Q 039469 2 DDVQIISTEAIKPSSPTPKHLRTYELSMLDQMFSNLYMPFVFFYSANKHQDFRKNSDFLKQSLAKTLTHYYPLAGRFV-- 79 (329)
Q Consensus 2 ~~v~i~s~~~v~p~~p~~~~~~~~~Ls~lD~~~~~~~~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~-- 79 (329)
|+|+|+++++|+|+.|+|. +.++||+||+..++.|++.+|||+.++. +....+++||+||+++|++||||||||+
T Consensus 6 ~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~-~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~ 82 (439)
T 4g22_A 6 MKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGS-SNFFDAKVLKDALSRALVPFYPMAGRLKRD 82 (439)
T ss_dssp CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSC-TTTTCHHHHHHHHHHHTTTTGGGGCEEEEC
T ss_pred eEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCC-ccccHHHHHHHHHHHHHhhccccceeeeeC
Confidence 6799999999999999976 5799999999988899999999997543 2345689999999999999999999997
Q ss_pred --CcceEEecCCCcEEEEEeecCChhhccCCCCccccccccCCCCCCCCccccccceeEEEEEEecCCcEEEEEeeeccc
Q 039469 80 --DSFSVECNDHGVTFIEAQVGCDMSKFLQPPNMGVMQQLIPPSPQSLRLEASERALLAVQVNYFSTGDVAIGICIWHGL 157 (329)
Q Consensus 80 --~~~~i~~~~~gv~f~~a~~~~~l~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvt~f~~gG~~l~~~~~H~v 157 (329)
++++|+||++||.|++|+++++++|+.+..+...+++|+|..+.. ....+.|++.+|||+|+|||++||+++||.+
T Consensus 83 ~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~--~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v 160 (439)
T 4g22_A 83 EDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYS--QGISSYALLVLQVTYFKCGGVSLGVGMRHHA 160 (439)
T ss_dssp TTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTT--SCTTSSCSEEEEEEECTTSCEEEEEEECTTT
T ss_pred CCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCcc--cccccCceeEEEEEEecCCCEEEEEEeeecc
Confidence 479999999999999999999999997633333567888865431 2234689999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHhcCCCCCccCCCccCCCcccCCCCCCC-------CCCCC---------CCCC-CCeEEEEEEeC
Q 039469 158 ADGSAISNFMKLWAEINRGVNENICNNVVLDCTSLFPPHSSLK-------DQHIK---------PQLT-SKVVFKRLFFD 220 (329)
Q Consensus 158 ~Dg~g~~~fl~~wa~~~rg~~~~~~~~P~~dr~~l~~~~~~p~-------~~~~~---------~~~~-~~~~~~~f~~~ 220 (329)
+||.|+.+|+++||++|||... .. .|++||+.+.+ +++|. +.+.. +... .++.+++|+|+
T Consensus 161 ~Dg~~~~~Fl~~wa~~~rg~~~-~~-~P~~dr~~l~~-~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs 237 (439)
T 4g22_A 161 ADGFSGLHFINSWSDMARGLDV-TL-PPFIDRTLLRA-RDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLT 237 (439)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCC-SS-CCBCCGGGGCC-CSSCCCSSCCGGGSCCC---------------CEEEEEEEEC
T ss_pred CcHHHHHHHHHHHHHHhCCCCC-CC-CCccccccccC-CCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEEEC
Confidence 9999999999999999999764 45 79999986642 22221 11110 0112 56899999999
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCCceeeehhHHHHHHHHHHhhcccccccccccceeEEEEeeCcccCCCCCCcCCcc
Q 039469 221 GKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAVAQERKRAINNKLYSHAMYYTMNLRSKMNPPMIPQCMG 300 (329)
Q Consensus 221 ~~~l~~Lk~~a~~~l~~~~~~~~~~~St~d~l~A~~W~~~~~ar~~~~~~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~G 300 (329)
+++|++||+++.+.. +..++|+||+|+||+|+|+++||...++ +++. +.++||+|+|++||+|++|+|
T Consensus 238 ~~~i~~LK~~a~~~~------~~~~~St~dal~A~iWr~~~rAr~~~~~--~~~~----l~~~vd~R~rl~Pplp~~Y~G 305 (439)
T 4g22_A 238 REQISALKAKSKEDG------NTISYSSYEMLAGHVWRCACKARGLEVD--QGTK----LYIATDGRARLRPSLPPGYFG 305 (439)
T ss_dssp HHHHHHHHHGGGGGG------CCCCCCHHHHHHHHHHHHHHHHTTCCTT--CEEE----EEEEEECTTTSSSCCCTTBCS
T ss_pred HHHHHHHHHHhhccC------CCCCccHHHHHHHHHHHHHHHhcCCCCC--CcEE----EEEEEcccCCCCCCCCCCccc
Confidence 999999999997642 2467999999999999999999986543 6788 999999999999999999999
Q ss_pred cceeeeeeeecCCCCCCcchHHHHhhccC
Q 039469 301 NIFRFVRAEWPLVGDDDIEATSLVKKGRV 329 (329)
Q Consensus 301 N~v~~~~~~~~~~dl~~~~l~~~a~~iR~ 329 (329)
|++..+.+.++++||.+.+|+++|.+||+
T Consensus 306 N~v~~~~~~~~~~el~~~~L~~~A~~Ir~ 334 (439)
T 4g22_A 306 NVIFTATPIAIAGDLEFKPVWYAASKIHD 334 (439)
T ss_dssp CCEEEECCEEEHHHHHHSCHHHHHHHHHH
T ss_pred ceeehhhcceEHHHHhhCcHHHHHHHHHH
Confidence 99999999999999988999999999985
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=3.5e-62 Score=469.72 Aligned_cols=311 Identities=35% Similarity=0.558 Sum_probs=261.7
Q ss_pred CcEEEEeeeEEeCCCCCCCCCceeccCcCccccccccccEEEEecCCCCC--CcccchHHHHHHHHHhhhhhccCCceec
Q 039469 2 DDVQIISTEAIKPSSPTPKHLRTYELSMLDQMFSNLYMPFVFFYSANKHQ--DFRKNSDFLKQSLAKTLTHYYPLAGRFV 79 (329)
Q Consensus 2 ~~v~i~s~~~v~p~~p~~~~~~~~~Ls~lD~~~~~~~~~~~~~f~~~~~~--~~~~~~~~L~~sL~~~L~~~p~LaGrl~ 79 (329)
|+|+|+++++|+|+.|||.+.+.++||+||+..++.|++.+|||+.++.. +....+++||+||+++|++||+|||||+
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~ 82 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRIN 82 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEE
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccC
Confidence 58999999999999999876678999999998778999999999976431 2446799999999999999999999999
Q ss_pred CcceEEecCCCcEEEEEeecCChhhccCC-CCccccccccCCCCCCC-CccccccceeEEEEEEecCCcEEEEEeeeccc
Q 039469 80 DSFSVECNDHGVTFIEAQVGCDMSKFLQP-PNMGVMQQLIPPSPQSL-RLEASERALLAVQVNYFSTGDVAIGICIWHGL 157 (329)
Q Consensus 80 ~~~~i~~~~~gv~f~~a~~~~~l~~l~~~-p~~~~~~~l~p~~~~~~-~~~~~~~Pll~vQvt~f~~gG~~l~~~~~H~v 157 (329)
++++|+||++||.|++++++++++|+... |+...++.|+|...... .....+.|++.+|||+|+|||++||+++||.+
T Consensus 83 ~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H~v 162 (421)
T 2bgh_A 83 VNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKI 162 (421)
T ss_dssp TTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEETTT
T ss_pred CCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEEEEeeEEe
Confidence 88999999999999999999999999765 65556678887662110 00134589999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHhcCCCCCccCCCccCC-CcccCC-CCCCCCCCCCCCCCCCeEEEEEEeCHHHHHHHHHHhhhhh
Q 039469 158 ADGSAISNFMKLWAEINRGVNENICNNVVLDC-TSLFPP-HSSLKDQHIKPQLTSKVVFKRLFFDGKKIVALKEKVNKEI 235 (329)
Q Consensus 158 ~Dg~g~~~fl~~wa~~~rg~~~~~~~~P~~dr-~~l~~~-~~~p~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~a~~~l 235 (329)
+||.|+.+|+++||++|||.... . .|.+|| +.+.|+ .+.|. + .+....+..+++|+|++++|++||+++.+..
T Consensus 163 ~Dg~~~~~fl~~wa~~~rg~~~~-~-~P~~dr~~~l~p~~~~~~~--~-~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~ 237 (421)
T 2bgh_A 163 ADVLSLATFLNAWTATCRGETEI-V-LPNFDLAARHFPPVDNTPS--P-ELVPDENVVMKRFVFDKEKIGALRAQASSAS 237 (421)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSCC-C-CCBCSHHHHHSCCCTTCCC--C-CCCCCSSEEEEEEEECHHHHHHHHHHTC---
T ss_pred chHHHHHHHHHHHHHHhcCCCCC-C-CCccccccccCCCcccCCC--C-ccCCccceEEEEEEECHHHHHHHHHHhhccC
Confidence 99999999999999999997643 5 789998 777765 44443 1 2223467899999999999999999997541
Q ss_pred ccCCCCCCCCCceeeehhHHHHHHHHHHhhcccccccccccceeEEEEeeCcccCCCCCCcCCcccceeeeeeeecCCCC
Q 039469 236 MVGSFDHELQASRFMVVSSLIWGAFIAVAQERKRAINNKLYSHAMYYTMNLRSKMNPPMIPQCMGNIFRFVRAEWPLVGD 315 (329)
Q Consensus 236 ~~~~~~~~~~~St~d~l~A~~W~~~~~ar~~~~~~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~v~~~~~~~~~~dl 315 (329)
...++|+||+|+|++|+|+++||....+..+++. +.++||+|+|++||+|++|+||++..+.+.+++++
T Consensus 238 ------~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~----l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~- 306 (421)
T 2bgh_A 238 ------EEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFV----VVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEW- 306 (421)
T ss_dssp --------CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEE----EEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTC-
T ss_pred ------CCCCCchhHhHHHHHHHHHHHHhcccCCCCCceE----EEEEecCccccCCCCCCCccceEEEEEEEEecccc-
Confidence 2368999999999999999999975433346788 99999999999999999999999999999998886
Q ss_pred CCcchHHHHhhccC
Q 039469 316 DDIEATSLVKKGRV 329 (329)
Q Consensus 316 ~~~~l~~~a~~iR~ 329 (329)
+.+|+++|.+||+
T Consensus 307 -~~~l~~~a~~ir~ 319 (421)
T 2bgh_A 307 -DKDFPDLIGPLRT 319 (421)
T ss_dssp -CCCGGGGHHHHHH
T ss_pred -cccHHHHHHHHHH
Confidence 7899999999985
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=4.2e-58 Score=445.38 Aligned_cols=313 Identities=21% Similarity=0.267 Sum_probs=253.2
Q ss_pred EEEEeeeEEeCCCCCCCCCceeccCcCcccccc-ccccEEEEecCCCCCC--cccchHHHHHHHHHhhhhhccCCceec-
Q 039469 4 VQIISTEAIKPSSPTPKHLRTYELSMLDQMFSN-LYMPFVFFYSANKHQD--FRKNSDFLKQSLAKTLTHYYPLAGRFV- 79 (329)
Q Consensus 4 v~i~s~~~v~p~~p~~~~~~~~~Ls~lD~~~~~-~~~~~~~~f~~~~~~~--~~~~~~~L~~sL~~~L~~~p~LaGrl~- 79 (329)
|+|+++++|+|+.|+++ .+.++||+||+.+.. .|++.+|||+.+...+ .+..+++||+||+++|++||+|||||+
T Consensus 2 v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~ 80 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVAC 80 (453)
T ss_dssp CEEEEESCCCCCTTCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEE
T ss_pred eEEEEEEEecCCCCCCC-CceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEc
Confidence 88999999999987554 378999999998544 6999999999764322 345789999999999999999999995
Q ss_pred -----CcceEEec-CCCcEEEEEeecCChhhccCC--CCccccccccCCCCCCCCcc---ccccceeEEEEEEecCCcEE
Q 039469 80 -----DSFSVECN-DHGVTFIEAQVGCDMSKFLQP--PNMGVMQQLIPPSPQSLRLE---ASERALLAVQVNYFSTGDVA 148 (329)
Q Consensus 80 -----~~~~i~~~-~~gv~f~~a~~~~~l~~l~~~--p~~~~~~~l~p~~~~~~~~~---~~~~Pll~vQvt~f~~gG~~ 148 (329)
++++|+|+ ++||.|++++++.+++++... ++...++.|+|..+.. .. ..+.|++.+|||+|+|||++
T Consensus 81 ~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~--~~~~~~~~~pll~vQvT~f~cGG~~ 158 (453)
T 2xr7_A 81 PQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEP--KDAPGVQLAPVLAIQVTLFPNHGIS 158 (453)
T ss_dssp ESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCC--EEETTEEECCCEEEEEEEETTTEEE
T ss_pred cCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCc--ccccccccCCeEEEEEEEccCCcEE
Confidence 37899999 599999999999999999752 2344567788875421 11 11289999999999999999
Q ss_pred EEEeeeccccchhhHHHHHHHHHHHhc-CCCC----CccCCCccCCCcccCCCCC-----CCC-C-CCC-C----CCCCC
Q 039469 149 IGICIWHGLADGSAISNFMKLWAEINR-GVNE----NICNNVVLDCTSLFPPHSS-----LKD-Q-HIK-P----QLTSK 211 (329)
Q Consensus 149 l~~~~~H~v~Dg~g~~~fl~~wa~~~r-g~~~----~~~~~P~~dr~~l~~~~~~-----p~~-~-~~~-~----~~~~~ 211 (329)
||+++||.++||.|+.+|+++||++|| |... +.. .|.+||+.+.+|.++ ..+ . +.. . ....+
T Consensus 159 lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~-~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (453)
T 2xr7_A 159 IGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEF-IPFYDRSVIKDPNGVGMSIWNEMKKYKHMMKMSDVVTPPD 237 (453)
T ss_dssp EEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGG-SCBCCCSSSCCSSCHHHHTTTTGGGCTTTSCCSCCCCCCS
T ss_pred EEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCC-CCccccccccCCCCcchHHHHhccccCCccccccccCCCC
Confidence 999999999999999999999999999 8621 234 689999877644321 011 0 100 0 02345
Q ss_pred eEEEEEEeCHHHHHHHHHHhhhhhccCCCCCCCCCceeeehhHHHHHHHHHHhhcc--c-ccccccccceeEEEEeeCcc
Q 039469 212 VVFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAVAQER--K-RAINNKLYSHAMYYTMNLRS 288 (329)
Q Consensus 212 ~~~~~f~~~~~~l~~Lk~~a~~~l~~~~~~~~~~~St~d~l~A~~W~~~~~ar~~~--~-~~~~~~~~~~~l~~~vd~R~ 288 (329)
...++|+|++++|++||+++.+... +..++|+||+|+|++|+|+++||... . ++++++. +.++||+|+
T Consensus 238 ~~~~~f~f~~~~i~~Lk~~a~~~~~-----~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~----l~~~vd~R~ 308 (453)
T 2xr7_A 238 KVRGTFIITRHDIGKLKNLVLTRRP-----KLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEF----FGCAADCRA 308 (453)
T ss_dssp CCCEEEEECHHHHHHHHHHHHHHSC-----CCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEE----EEEECCTTS
T ss_pred ceEEEEEECHHHHHHHHHHHhhcCC-----CCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceE----EEEEecccc
Confidence 6789999999999999999986520 12689999999999999999999752 0 2236788 999999999
Q ss_pred cCCCCCCcCCcccceeeeeeeecCCCCC-CcchHHHHhhccC
Q 039469 289 KMNPPMIPQCMGNIFRFVRAEWPLVGDD-DIEATSLVKKGRV 329 (329)
Q Consensus 289 rl~p~lp~~Y~GN~v~~~~~~~~~~dl~-~~~l~~~a~~iR~ 329 (329)
|++||+|++|+||++..+.+.++++||. +.+|+++|.+||+
T Consensus 309 rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ 350 (453)
T 2xr7_A 309 QFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGE 350 (453)
T ss_dssp CSSSCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHH
T ss_pred cCCCCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHH
Confidence 9999999999999999999999999998 5899999999985
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=7.8e-57 Score=436.54 Aligned_cols=311 Identities=22% Similarity=0.280 Sum_probs=249.2
Q ss_pred CcEEEEeeeEEeCCCCCCCCCceeccCcCccccc-cccccEEEEecCCCCCC--cccchHHHHHHHHHhhhhhccCCcee
Q 039469 2 DDVQIISTEAIKPSSPTPKHLRTYELSMLDQMFS-NLYMPFVFFYSANKHQD--FRKNSDFLKQSLAKTLTHYYPLAGRF 78 (329)
Q Consensus 2 ~~v~i~s~~~v~p~~p~~~~~~~~~Ls~lD~~~~-~~~~~~~~~f~~~~~~~--~~~~~~~L~~sL~~~L~~~p~LaGrl 78 (329)
..|+|+++++|+|+.|+++ .+.++||+||+.+. ..|++.+|||+.++..+ .+..+++||+||+++|++||+|||||
T Consensus 5 ~~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl 83 (454)
T 2e1v_A 5 PILTVLEQSQVSPPPDTLG-DKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFVGKL 83 (454)
T ss_dssp -CEEEEEEEEECCCTTSCC-CEEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGGSEE
T ss_pred ceEEEEEEEEEeCCCCCCC-CceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccceee
Confidence 3699999999999987554 37899999999854 46999999999764312 34578999999999999999999998
Q ss_pred c--C----cceEEec-CCCcEEEEEeecCChhhccCC-C-CccccccccCCCCCCC-CccccccceeEEEEEEecCCcEE
Q 039469 79 V--D----SFSVECN-DHGVTFIEAQVGCDMSKFLQP-P-NMGVMQQLIPPSPQSL-RLEASERALLAVQVNYFSTGDVA 148 (329)
Q Consensus 79 ~--~----~~~i~~~-~~gv~f~~a~~~~~l~~l~~~-p-~~~~~~~l~p~~~~~~-~~~~~~~Pll~vQvt~f~~gG~~ 148 (329)
+ + +++|+|+ ++||.|++++++.+++++... + +...++.|+|..+... .....+.|++.+|||+|+|||++
T Consensus 84 ~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~~ 163 (454)
T 2e1v_A 84 VVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIA 163 (454)
T ss_dssp EECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETTTEEE
T ss_pred eeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecCCcEE
Confidence 7 2 6899999 599999999999999999653 2 2335677888754210 00113469999999999999999
Q ss_pred EEEeeeccccchhhHHHHHHHHHHHhc-CCC-C----CccCCCccCCCcccCCC-------CCCCCC------CCCCCCC
Q 039469 149 IGICIWHGLADGSAISNFMKLWAEINR-GVN-E----NICNNVVLDCTSLFPPH-------SSLKDQ------HIKPQLT 209 (329)
Q Consensus 149 l~~~~~H~v~Dg~g~~~fl~~wa~~~r-g~~-~----~~~~~P~~dr~~l~~~~-------~~p~~~------~~~~~~~ 209 (329)
||+++||.++||.|+.+|+++||++|| |.. . +.. .|.+|| .+..|. ..+... +......
T Consensus 164 lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~-~P~~dr-~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (454)
T 2e1v_A 164 IGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGT-RPLYDR-IIKYPMLDEAYLKRAKVESFNEDYVTQSLAGP 241 (454)
T ss_dssp EEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSC-CCBCCC-CCCCHHHHHHHHHHTTCTTHHHHCCCCCCCCC
T ss_pred EEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCC-CCcccc-cCCCCCcchHHHHhhhccccccccCcccCCCC
Confidence 999999999999999999999999999 863 1 134 689998 553211 000000 0000123
Q ss_pred CCeEEEEEEeCHHHHHHHHHHhhhhhccCCCCCCCCCceeeehhHHHHHHHHHHhhcccccccccccceeEEEEeeCccc
Q 039469 210 SKVVFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAVAQERKRAINNKLYSHAMYYTMNLRSK 289 (329)
Q Consensus 210 ~~~~~~~f~~~~~~l~~Lk~~a~~~l~~~~~~~~~~~St~d~l~A~~W~~~~~ar~~~~~~~~~~~~~~~l~~~vd~R~r 289 (329)
.+...++|+|++++|++||+++.+... +..++|+||+|+||+|+|+++|| ++ +++. +.++||+|+|
T Consensus 242 ~~~~~~~f~f~~~~i~~LK~~a~~~~~-----~~~~~St~d~l~A~lWr~~~~Ar---~~--~~~~----l~~~vd~R~r 307 (454)
T 2e1v_A 242 SDKLRATFILTRAVINQLKDRVLAQLP-----TLEYVSSFTVACAYIWSCIAKSR---ND--KLQL----FGFPIDRRAR 307 (454)
T ss_dssp CCEEEEEEEECHHHHHHHHHHHHHHCT-----TCSCCCHHHHHHHHHHHHHHHHH---CC--SEEE----EEEEEECGGG
T ss_pred CCceEEEEEECHHHHHHHHHHHhhcCC-----CCCcccHHHHHHHHHHHHHhhhc---CC--CceE----EEEEecchhc
Confidence 467899999999999999999986520 12689999999999999999998 22 6788 9999999999
Q ss_pred CCCCCCcCCcccceeeeeeeecCCCCC-CcchHHHHhhccC
Q 039469 290 MNPPMIPQCMGNIFRFVRAEWPLVGDD-DIEATSLVKKGRV 329 (329)
Q Consensus 290 l~p~lp~~Y~GN~v~~~~~~~~~~dl~-~~~l~~~a~~iR~ 329 (329)
++||+|++|+||++..+.+.++++||. +.+|+++|.+||+
T Consensus 308 l~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ 348 (454)
T 2e1v_A 308 MKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGE 348 (454)
T ss_dssp SSSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHH
T ss_pred cCCCCCcccccceeeeEEeecchhhccccccHHHHHHHHHH
Confidence 999999999999999999999999998 4899999999985
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=1.8e-48 Score=377.46 Aligned_cols=292 Identities=13% Similarity=0.139 Sum_probs=221.7
Q ss_pred eccCcCcccc--ccccccEEEEecCCCCCCcccchHHHHHHHHHhhhhhccCCceec--C-------cceEEecCCCcEE
Q 039469 25 YELSMLDQMF--SNLYMPFVFFYSANKHQDFRKNSDFLKQSLAKTLTHYYPLAGRFV--D-------SFSVECNDHGVTF 93 (329)
Q Consensus 25 ~~Ls~lD~~~--~~~~~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~--~-------~~~i~~~~~gv~f 93 (329)
++||.+||+. ++.|++.+|||+.++..+.+..+++||+||+++|++||||||||+ + +++|.|++.++.|
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~~ 84 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPRV 84 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCEE
T ss_pred ccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCeE
Confidence 6899999997 689999999999643223456799999999999999999999986 1 4788887777779
Q ss_pred EEEeecC-----ChhhccC--CCCccccc--cccCCCCCCC---CccccccceeEEEEEEecCCcEEEEEeeeccccchh
Q 039469 94 IEAQVGC-----DMSKFLQ--PPNMGVMQ--QLIPPSPQSL---RLEASERALLAVQVNYFSTGDVAIGICIWHGLADGS 161 (329)
Q Consensus 94 ~~a~~~~-----~l~~l~~--~p~~~~~~--~l~p~~~~~~---~~~~~~~Pll~vQvt~f~~gG~~l~~~~~H~v~Dg~ 161 (329)
++++++. ++++|.. .|.. .+. .|.|....+. .....+.|++.+|||+| |||++||+++||.++||.
T Consensus 85 ~va~~~~d~~~p~~~~l~~~~~p~~-~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~~H~v~Dg~ 162 (451)
T 2rkv_A 85 VVKDLRDDPSAPTIEGMRKAGYPMA-MFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNGQHGAMDMV 162 (451)
T ss_dssp EEEECTTCTTSCBHHHHHHHTSCGG-GSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEEETTTCCHH
T ss_pred EEEeCCCCCCCCCHHHHHHcCCChh-hcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeeehhccccHH
Confidence 9988764 5777753 2321 111 2333221110 01233589999999966 799999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCCc---cCCCccCCCcccCCC--CCCC-------CCCC-----CCCCCCCeEEEEEEeCHHHH
Q 039469 162 AISNFMKLWAEINRGVNENI---CNNVVLDCTSLFPPH--SSLK-------DQHI-----KPQLTSKVVFKRLFFDGKKI 224 (329)
Q Consensus 162 g~~~fl~~wa~~~rg~~~~~---~~~P~~dr~~l~~~~--~~p~-------~~~~-----~~~~~~~~~~~~f~~~~~~l 224 (329)
|+.+|+++||++|||...+. . .|++||+.+.|.. ..|. +.+. .+....++.+++|+|++++|
T Consensus 163 g~~~Fl~awa~~~rg~~~~~~~~~-~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i 241 (451)
T 2rkv_A 163 GQDAVIRLLSKACRNDPFTEEEMT-AMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSPKAM 241 (451)
T ss_dssp HHHHHHHHHHHHHHTCCCCHHHHH-HTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEEEEEEECHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCccccc-cccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceEEEEEECHHHH
Confidence 99999999999999975221 2 4788887655431 1121 1110 11123567899999999999
Q ss_pred HHHHHHhhhhhccCCCCCCCCCceeeehhHHHHHHHHHHhhcccccccccccceeEEEEeeCcccCCCCCCcCCccccee
Q 039469 225 VALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAVAQERKRAINNKLYSHAMYYTMNLRSKMNPPMIPQCMGNIFR 304 (329)
Q Consensus 225 ~~Lk~~a~~~l~~~~~~~~~~~St~d~l~A~~W~~~~~ar~~~~~~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~v~ 304 (329)
++||+++.+.+. ....++|+||+|+|++|+|+++||....++.+++. +.++||+|+|++ +|.+|+||++.
T Consensus 242 ~~LK~~a~~~~~----~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~----l~~~vd~R~rl~--lP~~y~GN~~~ 311 (451)
T 2rkv_A 242 SELKDAATKTLD----ASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTE----FCRAVDARPAMG--VSNNYPGLLQN 311 (451)
T ss_dssp HHHHHHHHTTCC----TTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEE----EEEEEECHHHHT--CCTTCCSCCEE
T ss_pred HHHHHHHhhhcc----CCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceE----EEEEecccccCC--CCCCCccccee
Confidence 999999986531 01468999999999999999999821112236788 999999999997 88999999999
Q ss_pred eeeeeecCCCCCCcchHHHHhhccC
Q 039469 305 FVRAEWPLVGDDDIEATSLVKKGRV 329 (329)
Q Consensus 305 ~~~~~~~~~dl~~~~l~~~a~~iR~ 329 (329)
.+.+.++++||.+.+|+++|.+||+
T Consensus 312 ~~~~~~~~~el~~~~L~~~a~~ir~ 336 (451)
T 2rkv_A 312 MTYHNSTIGEIANESLGATASRLRS 336 (451)
T ss_dssp EEEEEEEHHHHHHSCHHHHHHHHHT
T ss_pred eecccCcHHHhccchHHHHHHHHHH
Confidence 9999999999999999999999996
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.00 E-value=6.6e-08 Score=91.23 Aligned_cols=266 Identities=15% Similarity=0.117 Sum_probs=148.9
Q ss_pred ceeccCcCccccc--cccccEEEEecCCCCCCcccchHHHHHHHHHhhhhhccCCceec--C-c-ceEEecCCCcE-EEE
Q 039469 23 RTYELSMLDQMFS--NLYMPFVFFYSANKHQDFRKNSDFLKQSLAKTLTHYYPLAGRFV--D-S-FSVECNDHGVT-FIE 95 (329)
Q Consensus 23 ~~~~Ls~lD~~~~--~~~~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~--~-~-~~i~~~~~gv~-f~~ 95 (329)
..+|||++++.+. ..++...+-++.. .+.+.|+++|.+++.++|.|-.++. + + .++........ +.
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~------ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~- 78 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGV------IDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGIC- 78 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESC------CCHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCCCE-
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecC------CCHHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCCCCCceE-
Confidence 5789999987543 2333444444432 4689999999999999999988875 1 1 12211111111 11
Q ss_pred EeecCChhhccCCCCccccccccCCCCCCCCccccccceeEEEEEEecCCcEEEEEeeeccccchhhHHHHHHHHHHHhc
Q 039469 96 AQVGCDMSKFLQPPNMGVMQQLIPPSPQSLRLEASERALLAVQVNYFSTGDVAIGICIWHGLADGSAISNFMKLWAEINR 175 (329)
Q Consensus 96 a~~~~~l~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvt~f~~gG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 175 (329)
..|+...........- ..+ .+ ...|++++.+.. ..++..|.+.+||.++||.|+..|++.|.+.++
T Consensus 79 ------~~d~~~~~~~~~~~~~--~~~----~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~ 144 (422)
T 1q9j_A 79 ------VIDGTAATNGSPSGNA--ELR----LD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRYT 144 (422)
T ss_dssp ------EEC------------C--CCC----CC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred ------EEECCCCCcchhhhcc--cCc----cC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHHH
Confidence 1111111100001000 011 12 357888888776 667899999999999999999999999999886
Q ss_pred -----CCCCCccCCCccC--------CCccc---C---C--CC-----CC-CCC-CC--CCCCCCCeEEEEEEeCHHHHH
Q 039469 176 -----GVNENICNNVVLD--------CTSLF---P---P--HS-----SL-KDQ-HI--KPQLTSKVVFKRLFFDGKKIV 225 (329)
Q Consensus 176 -----g~~~~~~~~P~~d--------r~~l~---~---~--~~-----~p-~~~-~~--~~~~~~~~~~~~f~~~~~~l~ 225 (329)
|...+....+..+ +.... + . .+ ++ ... |. ............+.++.+..+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~~~~~ 224 (422)
T 1q9j_A 145 DAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQTS 224 (422)
T ss_dssp HHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEEEECCCHHHHH
T ss_pred HhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCHHHHH
Confidence 3321111011111 10000 0 0 00 00 000 00 001112235677889999999
Q ss_pred HHHHHhhhhhccCCCCCCCCCceeeehhHHHHHHHHHHhhcccccccccccceeEEEEeeCcccCCCCCCcCCcccceee
Q 039469 226 ALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAVAQERKRAINNKLYSHAMYYTMNLRSKMNPPMIPQCMGNIFRF 305 (329)
Q Consensus 226 ~Lk~~a~~~l~~~~~~~~~~~St~d~l~A~~W~~~~~ar~~~~~~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~v~~ 305 (329)
+|++.+.+ ..+|.++++.|.+...+.+-+.. + ..... +.+++++|....|+++..=..|++.+
T Consensus 225 ~l~~~a~~----------~~~t~~~~l~aa~~~~l~r~~~~--~-~~~v~----~g~~~~~R~~~~~~~~~~~~~~~vG~ 287 (422)
T 1q9j_A 225 DLMAFGRE----------HRLSLNAVVAAAILLTEWQLRNT--P-HVPIP----YVYPVDLRFVLAPPVAPTEATNLLGA 287 (422)
T ss_dssp HHHHHHTT----------TTCCHHHHHHHHHHHHHHHHHTC--S-SCCEE----EEEEEETTTTSSSCCCTTTBSCCEEE
T ss_pred HHHHHHHH----------hCCCHHHHHHHHHHHHHHhcccC--C-CceEE----EeeeeecccccCCCCChhhhhhhhee
Confidence 99998874 35788999988866666654221 1 24567 88999999987655432223444444
Q ss_pred eeeeecCCCCCCcchHHHHhhcc
Q 039469 306 VRAEWPLVGDDDIEATSLVKKGR 328 (329)
Q Consensus 306 ~~~~~~~~dl~~~~l~~~a~~iR 328 (329)
....+++. .+.++.+++..++
T Consensus 288 f~n~lp~~--~~~~~~~~l~~v~ 308 (422)
T 1q9j_A 288 ASYLAEIG--PNTDIVDLASDIV 308 (422)
T ss_dssp EEEEECCC--SSCCHHHHHHHHH
T ss_pred eeeeeecc--CCCCHHHHHHHHH
Confidence 44444444 2456667666654
No 7
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.52 E-value=1.4e-05 Score=75.68 Aligned_cols=235 Identities=11% Similarity=0.022 Sum_probs=136.6
Q ss_pred cchHHHHHHHHHhhhhhccCCceec--CcceEEecCCCcEEEEEeecCChhhccCCCCc-ccccccc---CCCCCCCCcc
Q 039469 55 KNSDFLKQSLAKTLTHYYPLAGRFV--DSFSVECNDHGVTFIEAQVGCDMSKFLQPPNM-GVMQQLI---PPSPQSLRLE 128 (329)
Q Consensus 55 ~~~~~L~~sL~~~L~~~p~LaGrl~--~~~~i~~~~~gv~f~~a~~~~~l~~l~~~p~~-~~~~~l~---p~~~~~~~~~ 128 (329)
.+.+.|++++.+++.++|.|--++. ++ +......+.+. +.|+...++. .....++ -..++ +
T Consensus 33 ld~~~L~~A~~~lv~rh~~LRt~f~~~~~--~v~~~~~~~~~-------~~d~~~~~~~~~~~~~~~~~~~~~~f----d 99 (436)
T 1l5a_A 33 LDTTLLLRALHLTVSEIDLFRARFSAQGE--LYWHPFSPPID-------YQDLSIHLEAEPLAWRQIEQDLQRSS----T 99 (436)
T ss_dssp CCHHHHHHHHHHHHHTCGGGGEEECTTCC--EEECSSCCCCE-------EEECTTCTTHHHHHHHHHHHHHTSCC----C
T ss_pred CCHHHHHHHHHHHHHHhheeEEEEEecCC--eECCCcCCCcc-------EEeCCCCCCHHHHHHHHHHHHhcCCC----C
Confidence 4699999999999999999988875 22 11111111111 1122111110 0011100 00111 1
Q ss_pred ccccceeEEEEEEecCCcEEEEEeeeccccchhhHHHHHHHHHHHhc----CCCCCccCCCccC------CCcccCC---
Q 039469 129 ASERALLAVQVNYFSTGDVAIGICIWHGLADGSAISNFMKLWAEINR----GVNENICNNVVLD------CTSLFPP--- 195 (329)
Q Consensus 129 ~~~~Pll~vQvt~f~~gG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r----g~~~~~~~~P~~d------r~~l~~~--- 195 (329)
-...|++++.+-....+...|.+.+||.++||.|+..|++.+.+.+. |...+.. .+.+. +..+...
T Consensus 100 l~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 178 (436)
T 1l5a_A 100 LIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAA-FKPYQSYLEEEAAYLTSHRYW 178 (436)
T ss_dssp CBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCC-CCCHHHHHHHHHHHHTSHHHH
T ss_pred cCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCC-ccCHHHHHHHHHHhhccHhHH
Confidence 12468887777666667899999999999999999999999999886 4431111 11110 0000000
Q ss_pred ----------CCCC---CCCCCCCCCCCCeEEEEEEeCHHHHHHHHHHhhhhhccCCCCCCCCCceeeehhHHHHHHHHH
Q 039469 196 ----------HSSL---KDQHIKPQLTSKVVFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIA 262 (329)
Q Consensus 196 ----------~~~p---~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~a~~~l~~~~~~~~~~~St~d~l~A~~W~~~~~ 262 (329)
.+.| .++..............+.++.+..++|++.+... .+|.+.++.|.+-..+.+
T Consensus 179 ~~~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~----------~~t~~~~l~aa~~~~L~~ 248 (436)
T 1l5a_A 179 QDKQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANAN----------QIGWPDALVALCALYLES 248 (436)
T ss_dssp HHHHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHHT----------TCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHH
Confidence 0111 11000111122345778899999999999988753 578888888875555544
Q ss_pred HhhcccccccccccceeEEEEeeCcccCCCCCCcCCcccceeeeeeeecCCCCCCcchHHHHhhcc
Q 039469 263 VAQERKRAINNKLYSHAMYYTMNLRSKMNPPMIPQCMGNIFRFVRAEWPLVGDDDIEATSLVKKGR 328 (329)
Q Consensus 263 ar~~~~~~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~v~~~~~~~~~~dl~~~~l~~~a~~iR 328 (329)
--. +... +.+++++|.. + --.+-+|+++...-.+.... .+.++.+++..++
T Consensus 249 ~~g------~dv~----ig~~~~~R~~--~-~~~~~vG~f~n~lplr~~~~--~~~t~~~~l~~v~ 299 (436)
T 1l5a_A 249 AEP------DAPW----LWLPFMNRWG--S-VAANVPGLMVNSLPLLRLSA--QQTSLGNYLKQSG 299 (436)
T ss_dssp HST------TCCE----EEEEECCCTT--S-GGGGSCSCCCEEEEEECCCC--TTCBHHHHHHHHH
T ss_pred hhC------CceE----EeeecccCCC--h-HHhcCcceEEEEEEEEEecC--CCCCHHHHHHHHH
Confidence 322 3566 9999999975 2 23567777776665555544 2456777666654
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.52 E-value=1.3e-05 Score=77.84 Aligned_cols=264 Identities=10% Similarity=0.066 Sum_probs=151.5
Q ss_pred CceeccCcCcccc-------c--ccc-ccEEEEecCCCCCCcccchHHHHHHHHHhhhhhccCCceec--C-cc-eEEec
Q 039469 22 LRTYELSMLDQMF-------S--NLY-MPFVFFYSANKHQDFRKNSDFLKQSLAKTLTHYYPLAGRFV--D-SF-SVECN 87 (329)
Q Consensus 22 ~~~~~Ls~lD~~~-------~--~~~-~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~--~-~~-~i~~~ 87 (329)
...+|||+.-+.+ + ..| +...+-++.. .+.+.|++++.+++.++|.|--++. + .. ++...
T Consensus 94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~------ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~ 167 (520)
T 2jgp_A 94 QAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGK------LERTRVEAAFQRLIARHESLRTSFAVVNGEPVQNIHE 167 (520)
T ss_dssp CSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEEC------CCHHHHHHHHHHHHHHCGGGGEEEEEETTEEEEEECS
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCC------CCHHHHHHHHHHHHHHhHhheeEEEeeCCEEEEEECC
Confidence 3578999875421 1 123 4445555433 4699999999999999999988775 2 11 11111
Q ss_pred CCCcEEEEEeecCChhhccCCCCccccccccCCCCCCCCccccccceeEEEEEEecCCcEEEEEeeeccccchhhHHHHH
Q 039469 88 DHGVTFIEAQVGCDMSKFLQPPNMGVMQQLIPPSPQSLRLEASERALLAVQVNYFSTGDVAIGICIWHGLADGSAISNFM 167 (329)
Q Consensus 88 ~~gv~f~~a~~~~~l~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvt~f~~gG~~l~~~~~H~v~Dg~g~~~fl 167 (329)
...+.+.... .+-+++.. .....- .++ +-...|++++.+-....+...|.+.+||.++||.|+..|+
T Consensus 168 ~~~~~~~~~~--~~~~~~~~------~~~~~~-~~f----dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~ 234 (520)
T 2jgp_A 168 DVPFALAYSE--VTEEEARE------LVSSLV-QPF----DLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILL 234 (520)
T ss_dssp CCCCCCEEEE--CCHHHHHH------HHHHTC-CCC----CTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHH
T ss_pred CCCCceEEEe--CCHHHHHH------HHHHhc-CCC----CCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHH
Confidence 1111111111 11011100 000000 011 1124688887777676677899999999999999999999
Q ss_pred HHHHHHhcCCCCCccCCCccC-----CC----------------cccC--C-CCCCCCCCCCCCCCCCeEEEEEEeCHHH
Q 039469 168 KLWAEINRGVNENICNNVVLD-----CT----------------SLFP--P-HSSLKDQHIKPQLTSKVVFKRLFFDGKK 223 (329)
Q Consensus 168 ~~wa~~~rg~~~~~~~~P~~d-----r~----------------~l~~--~-~~~p~~~~~~~~~~~~~~~~~f~~~~~~ 223 (329)
+.+.+.++|...+..+.+..| +. .+.. + ..+|...+.+...........+.++.+.
T Consensus 235 ~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~ 314 (520)
T 2jgp_A 235 AEWVQLYQGDVLPELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKAL 314 (520)
T ss_dssp HHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHHH
T ss_pred HHHHHHHccCCCCCCCCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHHH
Confidence 999999988642111011111 00 0100 0 0111110111111223456778999999
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCceeeehhHHHHHHHHHHhhcccccccccccceeEEEEeeCcccCCCCCCcCCcccce
Q 039469 224 IVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAVAQERKRAINNKLYSHAMYYTMNLRSKMNPPMIPQCMGNIF 303 (329)
Q Consensus 224 l~~Lk~~a~~~l~~~~~~~~~~~St~d~l~A~~W~~~~~ar~~~~~~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~v 303 (329)
.++|++.+... .+|.+.++.|.+-..+.+--. .+... +.+++++|..- --.+-+|+++
T Consensus 315 ~~~l~~~a~~~----------~~T~~~~l~aa~a~~L~~~~~-----~~dv~----~g~~~~gR~~~---~~~~~vG~f~ 372 (520)
T 2jgp_A 315 TEGLHQLAQAT----------GTTLYMVLLAAYNVLLAKYAG-----QEDII----VGTPITGRSHA---DLEPIVGMFV 372 (520)
T ss_dssp HHHHHHHHHHH----------TCCHHHHHHHHHHHHHHHHHT-----CSCEE----EEEEECCCCSG---GGTTCCSCCC
T ss_pred HHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHhcC-----CCCeE----EEeccCCCCch---hhhccEEeee
Confidence 99999988754 478888888865555444322 14577 99999999762 1346777777
Q ss_pred eeeeeeecCCCCCCcchHHHHhhcc
Q 039469 304 RFVRAEWPLVGDDDIEATSLVKKGR 328 (329)
Q Consensus 304 ~~~~~~~~~~dl~~~~l~~~a~~iR 328 (329)
...-.+..... +.++.+++..++
T Consensus 373 n~lplr~~~~~--~~~~~~~l~~v~ 395 (520)
T 2jgp_A 373 NTLAMRNKPQR--EKTFSEFLQEVK 395 (520)
T ss_dssp EEEEEEECCCT--TSBHHHHHHHHH
T ss_pred eeeeEEecCCC--CCCHHHHHHHHH
Confidence 76666665542 456666666554
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.41 E-value=1.2e-05 Score=77.48 Aligned_cols=269 Identities=13% Similarity=0.055 Sum_probs=150.0
Q ss_pred ceeccCcCcccc-------ccccccEEEEecCCCCCCcccchHHHHHHHHHhhhhhccCCceec--C-cceEEecCCCcE
Q 039469 23 RTYELSMLDQMF-------SNLYMPFVFFYSANKHQDFRKNSDFLKQSLAKTLTHYYPLAGRFV--D-SFSVECNDHGVT 92 (329)
Q Consensus 23 ~~~~Ls~lD~~~-------~~~~~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~--~-~~~i~~~~~gv~ 92 (329)
..+|||+.-+.+ +.......+.|+.... .+.+.|+++|.+++.++|.|--++. + ... ......+.
T Consensus 12 ~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~----ld~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~-~v~~~~~~ 86 (493)
T 4hvm_A 12 GLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGR----IDDDRLAAAADEVLDAFPLLRVNFVDDDGLWM-RTRENADA 86 (493)
T ss_dssp CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESS----CCHHHHHHHHHHHHHHCGGGGEEEEESSSEEE-EECSCCCC
T ss_pred CCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCC----CCHHHHHHHHHHHHHhchhceeEEEccCCEEE-EecCCCCC
Confidence 678999875421 1111333444444432 5699999999999999999988875 2 222 22211133
Q ss_pred EEEEeecCChhhccCCCCc-cccccc----cCCCCCCCCccccccceeEEEEEEecCCcEEEEEeeeccccchhhHHHHH
Q 039469 93 FIEAQVGCDMSKFLQPPNM-GVMQQL----IPPSPQSLRLEASERALLAVQVNYFSTGDVAIGICIWHGLADGSAISNFM 167 (329)
Q Consensus 93 f~~a~~~~~l~~l~~~p~~-~~~~~l----~p~~~~~~~~~~~~~Pll~vQvt~f~~gG~~l~~~~~H~v~Dg~g~~~fl 167 (329)
+.+.. +...+.. .....+ .-.. + +-...|++++.+.....+...|.+.+||.++||.|+..|+
T Consensus 87 ~~~~d-------~~~~~~~~~~~~~~~~~~~~~~-f----dl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~ 154 (493)
T 4hvm_A 87 LVRSD-------LRGHPDPQARCVELLRADRDRP-T----DPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVL 154 (493)
T ss_dssp EEEEE-------CTTSSSHHHHHHHHHHHHHSSC-C----CTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHH
T ss_pred ceEEE-------CCCCCchHHHHHHHHHHHhcCC-C----CCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHH
Confidence 32222 1111110 011111 1010 1 1123688888777776567899999999999999999999
Q ss_pred HHHHHHhcCCCCCccCCCc---cCCC--cccCC-------------CCCCCCCCCCCCCCCCeEEEEEEeCHHHHHHHHH
Q 039469 168 KLWAEINRGVNENICNNVV---LDCT--SLFPP-------------HSSLKDQHIKPQLTSKVVFKRLFFDGKKIVALKE 229 (329)
Q Consensus 168 ~~wa~~~rg~~~~~~~~P~---~dr~--~l~~~-------------~~~p~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~ 229 (329)
+.+.+.+.|...+.. ... +.+. .+... .+.|.+ ..............+.++.+..++|++
T Consensus 155 ~~l~~~Y~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~l-~~~~~~~~~~~~~~~~l~~~~~~~l~~ 232 (493)
T 4hvm_A 155 GAVWQAYYGRFRPAQ-YRDFAEVADFHPLDRETVRVARHRWWSRRLPALPVR-GGDGGPVGPPETSRLRVPGSRWQALTE 232 (493)
T ss_dssp HHHHHHHTTCCCGGG-SBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCCC-C-------CCEEEEEEEEHHHHHHHHC
T ss_pred HHHHHHhCCCCCCcC-HHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCCC-CCCCCCCCCCeeEEEEcCHHHHHHHHH
Confidence 999999987652200 000 1111 11000 001111 100001112566788999999999997
Q ss_pred HhhhhhccCCCCCCCCCc--eeeehhHHHHHHHHHHhhc------c-cccccccccceeEEEEeeCcccCCCCCCcCCcc
Q 039469 230 KVNKEIMVGSFDHELQAS--RFMVVSSLIWGAFIAVAQE------R-KRAINNKLYSHAMYYTMNLRSKMNPPMIPQCMG 300 (329)
Q Consensus 230 ~a~~~l~~~~~~~~~~~S--t~d~l~A~~W~~~~~ar~~------~-~~~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~G 300 (329)
.+.. ..+| .+.++.|.+...+.+-+.. . .+ ..... +.+++++|..- --.+.+|
T Consensus 233 ~a~~----------~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g-~~dv~----~g~~~~gR~~~---~~~~~vG 294 (493)
T 4hvm_A 233 PGGP----------LGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTG-KDSLY----LSTEVDLRDHL---QLGSVVG 294 (493)
T ss_dssp C----------------CHHHHHHHHHHHHHHHC-----------------CEEE----EEEEEEHHHHT---TCCSBCS
T ss_pred HHHH----------cCCCchHHHHHHHHHHHHHHHhhhcccccccCcCC-CCCEE----EEeeccCCCCc---chhcCeE
Confidence 7764 3477 8888888765555554110 0 11 24677 99999999762 2357788
Q ss_pred cceeeeeeeecCCCCCCcchHHHHhhcc
Q 039469 301 NIFRFVRAEWPLVGDDDIEATSLVKKGR 328 (329)
Q Consensus 301 N~v~~~~~~~~~~dl~~~~l~~~a~~iR 328 (329)
+++...-.+....+..+.++.+++..++
T Consensus 295 ~f~n~lplr~~~~~~~~~t~~~~l~~v~ 322 (493)
T 4hvm_A 295 PLTDRVVFGVDLTGLREPSFRDLMSRTQ 322 (493)
T ss_dssp CCEEEEEEEEECTTCSSCBHHHHHHHHH
T ss_pred eeeceeEEEEecCCCcCCCHHHHHHHHH
Confidence 8887766666665322567887777665
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.36 E-value=8.4e-05 Score=70.79 Aligned_cols=271 Identities=12% Similarity=0.052 Sum_probs=149.0
Q ss_pred CceeccCcCcccc-----cc-ccccEEEEecCCCCCCcccchHHHHHHHHHhhhhhccCCceecC---cc-eEEec--CC
Q 039469 22 LRTYELSMLDQMF-----SN-LYMPFVFFYSANKHQDFRKNSDFLKQSLAKTLTHYYPLAGRFVD---SF-SVECN--DH 89 (329)
Q Consensus 22 ~~~~~Ls~lD~~~-----~~-~~~~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~---~~-~i~~~--~~ 89 (329)
...+|||+..++. +. ......+.|+.... .+.+.|+++|.+++.+++.|--++.. .+ ++... ..
T Consensus 15 ~~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~----ld~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~ 90 (466)
T 2xhg_A 15 AGNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEG----FDPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGLGGQ 90 (466)
T ss_dssp CEECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTC----CCHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCSSSC
T ss_pred CCCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCC----CCHHHHHHHHHHHHHhChHhheEEecCCCceeeeccccccc
Confidence 3678999875521 11 12233444554432 56999999999999999999888761 22 11111 11
Q ss_pred CcEEEEEeecCChhhccCCCCc-ccccccc--CCCCCCCCccccccceeEEEEEEecCCcEEEEEeeeccccchhhHHHH
Q 039469 90 GVTFIEAQVGCDMSKFLQPPNM-GVMQQLI--PPSPQSLRLEASERALLAVQVNYFSTGDVAIGICIWHGLADGSAISNF 166 (329)
Q Consensus 90 gv~f~~a~~~~~l~~l~~~p~~-~~~~~l~--p~~~~~~~~~~~~~Pll~vQvt~f~~gG~~l~~~~~H~v~Dg~g~~~f 166 (329)
.+.+.+.. +....+. ...+.+. -..++ +-...|++.+.+.... ++-.|-+.+||.++||.|+..|
T Consensus 91 ~~~~~~~d-------~~~~~~~~~~~~~~~~~~~~~f----dl~~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S~~~l 158 (466)
T 2xhg_A 91 LYDFFSYN-------LTAQPDVQQAIEAETQRLHSSM----NLQEGPLVKVALFQTL-HGDHLFLAIHHLVVDGISWRIL 158 (466)
T ss_dssp CCEEEEEE-------CTTCSCHHHHHHHHHHHHHTTC----CTTTCCCEEEEEEEET-TEEEEEEEEEGGGCCHHHHHHH
T ss_pred cceeEEEe-------cCCcccHHHHHHHHHHHHHhcc----CCCCCCeEEEEEEEcC-CCCEEEEEeeeeeechhhHHHH
Confidence 22222221 1111000 0000000 00011 1124688888877776 4444679999999999999999
Q ss_pred HHHHHHHhc----CCCCCccCCCc-c-C-----CCccc------------------CCCCCCCCCCCCCCCCCCeEEEEE
Q 039469 167 MKLWAEINR----GVNENICNNVV-L-D-----CTSLF------------------PPHSSLKDQHIKPQLTSKVVFKRL 217 (329)
Q Consensus 167 l~~wa~~~r----g~~~~~~~~P~-~-d-----r~~l~------------------~~~~~p~~~~~~~~~~~~~~~~~f 217 (329)
++.+.+.++ |......+.+. + | +..+. ++..+|...+.............+
T Consensus 159 ~~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~lp~~~~~~~~~~~~~~~~~~ 238 (466)
T 2xhg_A 159 FEDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKNVSLPKDYEVTDCKQKSVRNMRI 238 (466)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCCCCCCCSSCCSSCBGGGEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCcccCCccccccccccccceEEEE
Confidence 999998875 33211110111 1 0 00000 111111111111111223456788
Q ss_pred EeCHHHHHHHHHHhhhhhccCCCCCCCCCceeeehhHHHHHHHHHHhhcccccccccccceeEEEEeeCcccCCC-CCCc
Q 039469 218 FFDGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAVAQERKRAINNKLYSHAMYYTMNLRSKMNP-PMIP 296 (329)
Q Consensus 218 ~~~~~~l~~Lk~~a~~~l~~~~~~~~~~~St~d~l~A~~W~~~~~ar~~~~~~~~~~~~~~~l~~~vd~R~rl~p-~lp~ 296 (329)
.++.+..++|++.+... ..+|.++++.|.+-..+.+--. .+... +.+++++|....+ +--.
T Consensus 239 ~l~~~~~~~l~~~~~~~---------~~~t~~~~llaa~~~~l~~~~~-----~~dv~----ig~~~~gR~~~~~~~~~~ 300 (466)
T 2xhg_A 239 RLHPEETEQLLKHANQA---------YQTEINDLLLAALGLAFAEWSK-----LAQIV----IHLEGHGREDIIEQANVA 300 (466)
T ss_dssp ECCHHHHHHHHHTGGGT---------TTCCHHHHHHHHHHHHHHHHHC-----CSEEE----EEEEECCCCSCSTTCCCT
T ss_pred EcCHHHHHHHHHHhHHh---------hCCCHHHHHHHHHHHHHHHHhC-----CCceE----EEecCCCCCccccCCCcc
Confidence 99999999999877532 3578888888876555555422 14567 8999999987421 1234
Q ss_pred CCcccceeeeeeeecCCCCCCcchHHHHhhcc
Q 039469 297 QCMGNIFRFVRAEWPLVGDDDIEATSLVKKGR 328 (329)
Q Consensus 297 ~Y~GN~v~~~~~~~~~~dl~~~~l~~~a~~iR 328 (329)
+-+|+++...-.+..... +.++.+++..|+
T Consensus 301 ~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~ 330 (466)
T 2xhg_A 301 RTVGWFTSQYPVLLDLKQ--TAPLSDYIKLTK 330 (466)
T ss_dssp TCCSCCCEEEEEEEECSC--CCSHHHHHHHHH
T ss_pred ccccceeeeccEEEecCC--CCCHHHHHHHHH
Confidence 677777766555555442 456666666554
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=97.99 E-value=6.9e-05 Score=80.94 Aligned_cols=240 Identities=10% Similarity=0.002 Sum_probs=138.4
Q ss_pred cchHHHHHHHHHhhhhhccCCceec--C-c--ceEEecCCCcEEEEEeecCChhhccCCCCc---cccccccC---CCCC
Q 039469 55 KNSDFLKQSLAKTLTHYYPLAGRFV--D-S--FSVECNDHGVTFIEAQVGCDMSKFLQPPNM---GVMQQLIP---PSPQ 123 (329)
Q Consensus 55 ~~~~~L~~sL~~~L~~~p~LaGrl~--~-~--~~i~~~~~gv~f~~a~~~~~l~~l~~~p~~---~~~~~l~p---~~~~ 123 (329)
.+.+.|+++|.+++.+++.|--++. + . .++......+.+.+ .|+...+.. ..+..++- ..++
T Consensus 47 ld~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~~~-------~d~~~~~~~~~~~~~~~~~~~~~~~~f 119 (1304)
T 2vsq_A 47 LNIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEE-------IDLTHLTGSEQTAKINEYKEQDKIRGF 119 (1304)
T ss_dssp CCHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCEEE-------EECTTSCHHHHHHHHHHHHHHHHHHCC
T ss_pred cCHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCceEE-------EECCCCCchhHHHHHHHHHHHHhcCCC
Confidence 5699999999999999999987765 1 1 12222222222211 122211110 00111100 0011
Q ss_pred CCCccccccceeEEEEEEecCCcEEEEEeeeccccchhhHHHHHHHHHHHhcC----CCCCccCCCcc-C------CC--
Q 039469 124 SLRLEASERALLAVQVNYFSTGDVAIGICIWHGLADGSAISNFMKLWAEINRG----VNENICNNVVL-D------CT-- 190 (329)
Q Consensus 124 ~~~~~~~~~Pll~vQvt~f~~gG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg----~~~~~~~~P~~-d------r~-- 190 (329)
+-...|++++.+.....+...+-+.+||.++||.|+..|++.+++.+++ ......+.+.+ | ..
T Consensus 120 ----dl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~~~ 195 (1304)
T 2vsq_A 120 ----DLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDK 195 (1304)
T ss_dssp ----CTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTSCH
T ss_pred ----CCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcchh
Confidence 1124688888887777678999999999999999999999999988763 32111101111 1 00
Q ss_pred ---------cccC---CCCCCCCCCCCCCCCCCeEEEEEEeCHHHHHHHHHHhhhhhccCCCCCCCCCceeeehhHHHHH
Q 039469 191 ---------SLFP---PHSSLKDQHIKPQLTSKVVFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWG 258 (329)
Q Consensus 191 ---------~l~~---~~~~p~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~a~~~l~~~~~~~~~~~St~d~l~A~~W~ 258 (329)
.+.. +..+|.. +.............|.++++..++||+.+... .+|.+.++.|.+-.
T Consensus 196 ~~~~~yW~~~L~~~~~~~~lp~~-~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~----------~~T~~~vllaa~a~ 264 (1304)
T 2vsq_A 196 QASLRYWREYLEGFEGQTTFAEQ-RKKQKDGYEPKELLFSPSEAETKAFTELAKSQ----------HTTLSTALQAVWSV 264 (1304)
T ss_dssp HHHHHHHHHHHTTCCCCCTTTTT-CCCSSCCCCEEEEEECCCHHHHHHHHHHHHHT----------TCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCCCccccCCCC-CCccccccCcceEEEecCHHHHHHHHHHHHHc----------CCCHHHHHHHHHHH
Confidence 0000 0011110 00111122345667889999999999998763 47888888886544
Q ss_pred HHHHHhhcccccccccccceeEEEEeeCcccCCCCCCcCCcccceeeeeeeecCCCCCCcchHHHHhhcc
Q 039469 259 AFIAVAQERKRAINNKLYSHAMYYTMNLRSKMNPPMIPQCMGNIFRFVRAEWPLVGDDDIEATSLVKKGR 328 (329)
Q Consensus 259 ~~~~ar~~~~~~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~v~~~~~~~~~~dl~~~~l~~~a~~iR 328 (329)
.+.|--. .+... +..++++|..-.+.+ ++-+|+.+...-.+.... .+.++.++...+|
T Consensus 265 ~L~r~tg-----~~dvv----~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~--~~~s~~~ll~~v~ 322 (1304)
T 2vsq_A 265 LISRYQQ-----SGDLA----FGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLS--EGITFNGLLKRLQ 322 (1304)
T ss_dssp HHHHHHT-----CSEEE----EEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECC--TTCBHHHHHHHHH
T ss_pred HHHHhcC-----CCCEE----EEEEeCCCCccchhh-hcccccceeEEEEEecCC--CCCcHHHHHHHHH
Confidence 4444322 14577 999999997643222 466777766665565554 2457777776665
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.28 E-value=0.0025 Score=61.97 Aligned_cols=153 Identities=9% Similarity=-0.061 Sum_probs=93.9
Q ss_pred cEEEEEeeeccccchhhHHHHHHHHHHHhcCCC---CCccCCCccC----CCcccCCC----CCCCC--CC---------
Q 039469 146 DVAIGICIWHGLADGSAISNFMKLWAEINRGVN---ENICNNVVLD----CTSLFPPH----SSLKD--QH--------- 203 (329)
Q Consensus 146 G~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~---~~~~~~P~~d----r~~l~~~~----~~p~~--~~--------- 203 (329)
-.-|.+.++|.++||.|...|++.+=+...... .... .|.++ ...|.|+- ..|.- .+
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~-~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~ 255 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSRE-MKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEY 255 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGG-SCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHH
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccC-CCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHH
Confidence 456777899999999999999998877665211 1112 33332 12233321 12210 00
Q ss_pred --------CCC----CC-CCCeEEEEEEeCHHHHHHHHHHhhhhhccCCCCCCCCCceeeehhHHHHHHHHHHhhc-ccc
Q 039469 204 --------IKP----QL-TSKVVFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAVAQE-RKR 269 (329)
Q Consensus 204 --------~~~----~~-~~~~~~~~f~~~~~~l~~Lk~~a~~~l~~~~~~~~~~~St~d~l~A~~W~~~~~ar~~-~~~ 269 (329)
..+ .. ...-....+.|+.+..++|++.|++. -+..+|-+.+|.|.+-.++.+.... ...
T Consensus 256 ~~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck~~-------~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~ 328 (519)
T 3fot_A 256 TSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTR-------LGPGFTISHLTQAAIVLALLDHLKPNDLS 328 (519)
T ss_dssp HHHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHHHH-------TCTTCCHHHHHHHHHHHHHHHHC----CC
T ss_pred HHHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHHhc-------CCCCeeHHHHHHHHHHHHHHhhcCCcccC
Confidence 001 11 12334567889999999999999875 2456888889977776666553221 011
Q ss_pred cccccccceeEEEEeeCcccCCCCCCcCCcccceeeeeeee
Q 039469 270 AINNKLYSHAMYYTMNLRSKMNPPMIPQCMGNIFRFVRAEW 310 (329)
Q Consensus 270 ~~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~v~~~~~~~ 310 (329)
...... +..+||+|+++.++.-.+|+|.+........
T Consensus 329 ~~~~~~----~~~pvnlR~~l~~~~~~n~~~~~~~~~~~~v 365 (519)
T 3fot_A 329 DDEVFI----SPTSVDGRRWLREDIASNFYAMCQTAAVVRI 365 (519)
T ss_dssp TTCCEE----EEEEEECGGGBCHHHHTSCCSCCEEEEEEEE
T ss_pred CCccEE----EEeeeeccccCCCcccccccceeeeeeeeEe
Confidence 112455 9999999999976554578888877655544
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=71.43 E-value=3.6 Score=34.70 Aligned_cols=44 Identities=11% Similarity=0.306 Sum_probs=32.3
Q ss_pred cceeEEEEEEecCCc--EEEEEeeeccccchhhHHHHHHHHHHHhc
Q 039469 132 RALLAVQVNYFSTGD--VAIGICIWHGLADGSAISNFMKLWAEINR 175 (329)
Q Consensus 132 ~Pll~vQvt~f~~gG--~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 175 (329)
.|++.+--..-..|. +-|+++++|.+.||.-...|++.+.+.+.
T Consensus 164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 588764211112243 67888899999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=70.84 E-value=3.8 Score=34.65 Aligned_cols=43 Identities=28% Similarity=0.414 Sum_probs=30.8
Q ss_pred cceeEEEEEEecCCc--EEEEEeeeccccchhhHHHHHHHHHHHh
Q 039469 132 RALLAVQVNYFSTGD--VAIGICIWHGLADGSAISNFMKLWAEIN 174 (329)
Q Consensus 132 ~Pll~vQvt~f~~gG--~~l~~~~~H~v~Dg~g~~~fl~~wa~~~ 174 (329)
.|++.+=--.-..|. +-|+++++|.+.||.-...|++.+.+.+
T Consensus 172 ~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 172 YPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 687754111111233 5788889999999999999999998754
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=69.69 E-value=4.1 Score=34.50 Aligned_cols=44 Identities=11% Similarity=0.280 Sum_probs=32.2
Q ss_pred cceeEEEEEEecCCc--EEEEEeeeccccchhhHHHHHHHHHHHhc
Q 039469 132 RALLAVQVNYFSTGD--VAIGICIWHGLADGSAISNFMKLWAEINR 175 (329)
Q Consensus 132 ~Pll~vQvt~f~~gG--~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 175 (329)
.|++.+---.-..|. +-|+++++|.+.||.-...|++.+.+.+.
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 577765211122233 67888999999999999999999998764
No 16
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=67.96 E-value=3.9 Score=34.75 Aligned_cols=30 Identities=17% Similarity=0.286 Sum_probs=27.0
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhcC
Q 039469 147 VAIGICIWHGLADGSAISNFMKLWAEINRG 176 (329)
Q Consensus 147 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 176 (329)
+-|+++++|.+.||.-...|++.|.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 458899999999999999999999998753
No 17
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=66.42 E-value=5.2 Score=34.21 Aligned_cols=29 Identities=21% Similarity=0.289 Sum_probs=26.6
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhc
Q 039469 147 VAIGICIWHGLADGSAISNFMKLWAEINR 175 (329)
Q Consensus 147 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 175 (329)
+-|+++++|.+.||.-...|++.+.+.+.
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le 224 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLE 224 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 56899999999999999999999998775
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=66.41 E-value=5.1 Score=34.47 Aligned_cols=29 Identities=14% Similarity=0.266 Sum_probs=26.6
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhc
Q 039469 147 VAIGICIWHGLADGSAISNFMKLWAEINR 175 (329)
Q Consensus 147 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 175 (329)
+-|+++++|.+.||.-...|++.+.+.+-
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 56899999999999999999999998774
No 19
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=65.58 E-value=4.7 Score=34.59 Aligned_cols=29 Identities=10% Similarity=0.256 Sum_probs=26.9
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhc
Q 039469 147 VAIGICIWHGLADGSAISNFMKLWAEINR 175 (329)
Q Consensus 147 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 175 (329)
+-|+++++|.+.||.-...|++.+.+.+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998764
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=65.06 E-value=5.6 Score=34.68 Aligned_cols=29 Identities=24% Similarity=0.504 Sum_probs=26.4
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhc
Q 039469 147 VAIGICIWHGLADGSAISNFMKLWAEINR 175 (329)
Q Consensus 147 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 175 (329)
+-|+++++|.+.||.-...|++.+.+.+.
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 56889999999999999999999998774
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=59.51 E-value=8.2 Score=33.51 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=27.1
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhcC
Q 039469 147 VAIGICIWHGLADGSAISNFMKLWAEINRG 176 (329)
Q Consensus 147 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 176 (329)
+-|+++++|.+.||.-...|++.|.+..-.
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999998763
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=57.88 E-value=9.1 Score=33.08 Aligned_cols=29 Identities=17% Similarity=0.347 Sum_probs=26.6
Q ss_pred EEEEEeeeccccchhhHHHHHHHHHHHhc
Q 039469 147 VAIGICIWHGLADGSAISNFMKLWAEINR 175 (329)
Q Consensus 147 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 175 (329)
+-|+++++|.+.||.-...|++.|.+...
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le 233 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIE 233 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHh
Confidence 45899999999999999999999999875
No 23
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=44.77 E-value=61 Score=20.93 Aligned_cols=49 Identities=10% Similarity=0.144 Sum_probs=37.3
Q ss_pred CeEEEEEEeCHHHHHHHHHHhhhhhccCCCCCCCCCceeeehhHHHHHHHHHHhhcccccccc
Q 039469 211 KVVFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAVAQERKRAINN 273 (329)
Q Consensus 211 ~~~~~~f~~~~~~l~~Lk~~a~~~l~~~~~~~~~~~St~d~l~A~~W~~~~~ar~~~~~~~~~ 273 (329)
+.....|+|+.++-+.|.+.|.++ -|.+..++=+.+.++-....+.++.
T Consensus 14 ~~~~Vs~Y~SkEey~~L~klA~eE--------------~eSV~sfIKR~IlK~l~ykkgtnqd 62 (66)
T 2k1o_A 14 RNFSVTFYLSKEEHDVLRRLADEE--------------VESVNSFVKRHILKTIIYKKGTNQD 62 (66)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHHTT--------------CSCHHHHHHHHHHHHHCSSCSSCCC
T ss_pred cceEEEEEecHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 456678999999999999999875 3567788888888887655443333
No 24
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=42.05 E-value=35 Score=25.60 Aligned_cols=41 Identities=12% Similarity=0.314 Sum_probs=30.6
Q ss_pred cEEEEecCCCCCCcccchHHHHHHHHHhhhhhccCCceec-----CcceEEec
Q 039469 40 PFVFFYSANKHQDFRKNSDFLKQSLAKTLTHYYPLAGRFV-----DSFSVECN 87 (329)
Q Consensus 40 ~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~-----~~~~i~~~ 87 (329)
-+...|+.+ +++.|+++|...+.+-..+||.+. ++++|..+
T Consensus 84 vm~i~f~gd-------dlea~ekalkemirqarkfagtvtytl~gn~l~i~it 129 (170)
T 4hhu_A 84 VMVIVFEGD-------DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVIT 129 (170)
T ss_dssp EEEEEEECS-------CHHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEEE
T ss_pred EEEEEEecC-------cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEe
Confidence 345556644 589999999999999999999886 24555544
No 25
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=39.06 E-value=40 Score=25.28 Aligned_cols=39 Identities=13% Similarity=0.332 Sum_probs=29.6
Q ss_pred EEEecCCCCCCcccchHHHHHHHHHhhhhhccCCceec-----CcceEEec
Q 039469 42 VFFYSANKHQDFRKNSDFLKQSLAKTLTHYYPLAGRFV-----DSFSVECN 87 (329)
Q Consensus 42 ~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~-----~~~~i~~~ 87 (329)
...|+.+ +++.|+++|...+.+-..+||.+. ++++|..+
T Consensus 5 ~i~f~gd-------dlea~ekalkemirqarkfagtvtytl~gn~l~i~it 48 (170)
T 4hhu_A 5 VIVFEGD-------DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVIT 48 (170)
T ss_dssp EEEEECS-------CHHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEE
T ss_pred EEEEecC-------cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEe
Confidence 4556644 589999999999999999999886 24555544
No 26
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=36.39 E-value=7.4 Score=36.47 Aligned_cols=28 Identities=14% Similarity=0.260 Sum_probs=0.0
Q ss_pred EEEEeeeccccchhhHHHHHHHHHHHhc
Q 039469 148 AIGICIWHGLADGSAISNFMKLWAEINR 175 (329)
Q Consensus 148 ~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 175 (329)
-|+++++|.+.||.-...|++.|.+.+-
T Consensus 392 ~lsls~DHRviDG~~aa~Fl~~lk~~Le 419 (428)
T 3dva_I 392 ALSLSFDHRMIDGATAQKALNHIKRLLS 419 (428)
T ss_dssp ----------------------------
T ss_pred EEEEEecccccchHHHHHHHHHHHHHHh
Confidence 5899999999999999999999998764
No 27
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=34.14 E-value=1e+02 Score=20.39 Aligned_cols=33 Identities=12% Similarity=0.319 Sum_probs=26.9
Q ss_pred cchHHHHHHHHHhhhhhccCCceec---C--cceEEec
Q 039469 55 KNSDFLKQSLAKTLTHYYPLAGRFV---D--SFSVECN 87 (329)
Q Consensus 55 ~~~~~L~~sL~~~L~~~p~LaGrl~---~--~~~i~~~ 87 (329)
++++....+|...+.+-..+||.+. | .++|..+
T Consensus 10 ddleafekalkemirqarkfagtvtytldgndleirit 47 (85)
T 2kl8_A 10 DDLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRIT 47 (85)
T ss_dssp SSHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEE
T ss_pred CcHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEe
Confidence 3589999999999999999999986 2 4666655
No 28
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=33.08 E-value=89 Score=19.42 Aligned_cols=39 Identities=21% Similarity=0.221 Sum_probs=29.6
Q ss_pred EEEEEEeCHHHHHHHHHHhhhhhccCCCCCCCCCceeeehhHHHHHHHHHHhh
Q 039469 213 VFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAVAQ 265 (329)
Q Consensus 213 ~~~~f~~~~~~l~~Lk~~a~~~l~~~~~~~~~~~St~d~l~A~~W~~~~~ar~ 265 (329)
....|+|+.++-+.|++.|.++. |.+..++=+.+.++-.
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~--------------eSV~sfIKR~IlK~lr 40 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEE--------------ESVGSYIKRYILKALR 40 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTT--------------SCTTHHHHHHHHHHHT
T ss_pred ceEEEEecHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHH
Confidence 35679999999999999998762 4456677777777653
No 29
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=20.19 E-value=48 Score=17.08 Aligned_cols=19 Identities=21% Similarity=0.200 Sum_probs=14.7
Q ss_pred CCCceeeehhHHHHHHHHH
Q 039469 244 LQASRFMVVSSLIWGAFIA 262 (329)
Q Consensus 244 ~~~St~d~l~A~~W~~~~~ 262 (329)
+-.++.|-|+-++|+++..
T Consensus 6 svftsqdylsdhlwralna 24 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred ceeecHHHHHHHHHHHHhc
Confidence 3456688999999998753
Done!