Query         039471
Match_columns 363
No_of_seqs    347 out of 2386
Neff          9.9 
Searched_HMMs 29240
Date          Mon Mar 25 17:06:01 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039471.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039471hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4asz_A BDNF/NT-3 growth factor 100.0 1.2E-52 4.1E-57  376.8  12.8  237  110-363    19-279 (299)
  2 4gt4_A Tyrosine-protein kinase 100.0 3.5E-52 1.2E-56  375.3  14.8  237  110-363    32-296 (308)
  3 3omv_A RAF proto-oncogene seri 100.0 1.1E-51 3.7E-56  370.7  17.0  235  110-363    42-290 (307)
  4 4aoj_A High affinity nerve gro 100.0 4.6E-52 1.6E-56  377.9  13.7  237  110-363    47-309 (329)
  5 4aw0_A HPDK1, 3-phosphoinositi 100.0 6.3E-52 2.2E-56  371.5  14.0  229  111-363    39-281 (311)
  6 4fih_A Serine/threonine-protei 100.0 1.8E-51 6.2E-56  373.9  15.0  232  108-363    78-320 (346)
  7 4b9d_A Serine/threonine-protei 100.0 1.2E-51 4.1E-56  375.7  12.7  232  109-363    29-273 (350)
  8 3fpq_A Serine/threonine-protei 100.0 5.1E-51 1.8E-55  363.7  13.2  228  111-363    33-279 (290)
  9 4fie_A Serine/threonine-protei 100.0 7.4E-50 2.5E-54  372.0  17.6  232  108-363   155-397 (423)
 10 3hyh_A Carbon catabolite-derep 100.0   2E-50 6.9E-55  356.9  12.7  226  110-363    19-259 (275)
 11 4g3f_A NF-kappa-beta-inducing  100.0 6.2E-50 2.1E-54  362.7  13.8  229  110-363    64-306 (336)
 12 3hmm_A TGF-beta receptor type- 100.0 1.2E-49 4.2E-54  359.1  14.1  246  110-363     9-287 (303)
 13 3ubd_A Ribosomal protein S6 ki 100.0 7.1E-50 2.4E-54  358.1  11.4  226  111-362    31-272 (304)
 14 4ase_A Vascular endothelial gr 100.0 2.2E-49 7.7E-54  363.1  11.6  237  111-363    71-337 (353)
 15 4g31_A Eukaryotic translation  100.0 3.8E-47 1.3E-51  341.5  14.2  232  110-363    11-276 (299)
 16 4b99_A Mitogen-activated prote 100.0 8.3E-46 2.8E-50  345.0  13.6  244  110-363    60-341 (398)
 17 4f9c_A Cell division cycle 7-r 100.0 4.3E-45 1.5E-49  336.6  14.5  183  110-305    27-251 (361)
 18 3v5w_A G-protein coupled recep 100.0   4E-44 1.4E-48  348.2  14.4  228  109-361   194-439 (689)
 19 3uto_A Twitchin; kinase, muscl 100.0 2.4E-44 8.3E-49  350.7  12.1  231  111-363   164-407 (573)
 20 3soc_A Activin receptor type-2 100.0 1.8E-42 6.3E-47  315.8  14.8  243  110-363    30-308 (322)
 21 3fxz_A Serine/threonine-protei 100.0 9.6E-42 3.3E-46  307.5  16.6  236  104-363    20-266 (297)
 22 3fe3_A MAP/microtubule affinit 100.0 6.4E-42 2.2E-46  312.7  14.8  225  112-363    23-261 (328)
 23 2qkw_B Protein kinase; three-h 100.0 7.2E-41 2.5E-45  305.1  19.5  250  108-363    43-305 (321)
 24 3zgw_A Maternal embryonic leuc 100.0 6.7E-42 2.3E-46  314.5  12.8  229  110-363    16-257 (347)
 25 2yab_A Death-associated protei 100.0 1.7E-41 5.8E-46  313.6  13.9  231  110-363    18-269 (361)
 26 3tki_A Serine/threonine-protei 100.0 2.4E-41 8.3E-46  308.4  14.0  233  110-363    13-258 (323)
 27 2nru_A Interleukin-1 receptor- 100.0 1.6E-40 5.4E-45  300.7  19.0  244  110-363    37-296 (307)
 28 3uim_A Brassinosteroid insensi 100.0 1.3E-40 4.5E-45  303.9  18.4  255  106-363    32-301 (326)
 29 3p86_A Serine/threonine-protei 100.0 1.8E-41 6.2E-46  307.4  11.6  232  111-363    44-288 (309)
 30 1tki_A Titin; serine kinase, m 100.0 1.5E-41 5.2E-46  309.5  11.1  232  110-363    11-254 (321)
 31 2psq_A Fibroblast growth facto 100.0 7.6E-41 2.6E-45  310.7  15.9  217  130-363   116-354 (370)
 32 3uc3_A Serine/threonine-protei 100.0 5.1E-41 1.7E-45  310.9  14.3  233  110-363    26-271 (361)
 33 2c30_A Serine/threonine-protei 100.0 1.6E-40 5.5E-45  302.8  17.1  230  110-363    51-291 (321)
 34 4hcu_A Tyrosine-protein kinase 100.0   4E-41 1.4E-45  299.0  12.8  231  110-363    16-256 (269)
 35 1opk_A P150, C-ABL, proto-onco 100.0 7.3E-41 2.5E-45  322.2  15.6  230  112-363   228-468 (495)
 36 3sxs_A Cytoplasmic tyrosine-pr 100.0 7.6E-41 2.6E-45  297.0  13.6  231  110-363    14-254 (268)
 37 3cbl_A C-FES, proto-oncogene t 100.0 2.6E-41   9E-46  314.7  10.9  232  110-363   120-364 (377)
 38 1o6l_A RAC-beta serine/threoni 100.0 1.3E-40 4.5E-45  304.9  15.2  224  110-359    11-248 (337)
 39 2y0a_A Death-associated protei 100.0 6.8E-41 2.3E-45  305.9  13.0  231  110-363    17-268 (326)
 40 4euu_A Serine/threonine-protei 100.0 5.6E-40 1.9E-44  298.9  18.6  240  111-363    16-299 (319)
 41 3kn6_A Ribosomal protein S6 ki 100.0 1.8E-40 6.2E-45  302.9  15.3  236  111-363    18-267 (325)
 42 3kul_A Ephrin type-A receptor  100.0 8.7E-41   3E-45  305.1  13.1  231  111-363    56-303 (325)
 43 4dc2_A Protein kinase C IOTA t 100.0 2.2E-40 7.5E-45  309.1  15.5  234  110-361    58-307 (396)
 44 3s95_A LIMK-1, LIM domain kina 100.0   8E-41 2.7E-45  303.2  12.0  234  110-363    16-272 (310)
 45 2bdw_A Hypothetical protein K1 100.0 2.6E-40 8.8E-45  306.2  15.6  231  110-363    35-281 (362)
 46 1k9a_A Carboxyl-terminal SRC k 100.0 2.2E-40 7.7E-45  315.3  15.5  225  112-363   201-435 (450)
 47 3h4j_B AMPK kdaid, SNF1-like p 100.0 8.5E-41 2.9E-45  305.9  12.0  226  110-363    15-255 (336)
 48 4fr4_A YANK1, serine/threonine 100.0 3.3E-40 1.1E-44  306.9  16.1  227  110-360    21-264 (384)
 49 1qcf_A Haematopoetic cell kina 100.0 8.9E-41   3E-45  318.6  12.6  229  112-363   196-434 (454)
 50 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.1E-40   7E-45  305.6  14.1  226  110-361    29-269 (353)
 51 3gen_A Tyrosine-protein kinase 100.0 1.4E-40 4.7E-45  297.6  12.4  229  112-363    32-270 (283)
 52 2zv2_A Calcium/calmodulin-depe 100.0 2.2E-40 7.4E-45  298.7  13.8  229  110-363    19-289 (298)
 53 2pmi_A Negative RE, cyclin-dep 100.0 3.5E-40 1.2E-44  300.0  15.2  244  110-363    11-290 (317)
 54 1xjd_A Protein kinase C, theta 100.0 3.1E-40 1.1E-44  303.3  14.8  227  110-362    23-264 (345)
 55 3soa_A Calcium/calmodulin-depe 100.0 2.9E-40 9.8E-45  313.2  14.9  232  110-363    17-264 (444)
 56 3l9p_A Anaplastic lymphoma kin 100.0 9.8E-41 3.3E-45  309.7  11.4  237  110-363    77-335 (367)
 57 3lb7_A RAF proto-oncogene seri 100.0   5E-40 1.7E-44  297.7  15.6  235  110-363    42-290 (307)
 58 2x4f_A Myosin light chain kina 100.0 1.5E-40 5.2E-45  308.9  12.3  230  112-363    97-339 (373)
 59 3qup_A Tyrosine-protein kinase 100.0 1.9E-40 6.5E-45  302.4  12.7  236  110-362    29-287 (323)
 60 3c0i_A Peripheral plasma membr 100.0 3.6E-40 1.2E-44  304.1  14.2  234  111-363    31-283 (351)
 61 3poz_A Epidermal growth factor 100.0 2.6E-40   9E-45  302.2  13.1  231  110-363    21-268 (327)
 62 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.4E-40 1.5E-44  303.1  14.5  221  111-360    48-282 (350)
 63 1fot_A TPK1 delta, CAMP-depend 100.0 7.6E-40 2.6E-44  297.7  15.9  221  110-359    12-246 (318)
 64 3niz_A Rhodanese family protei 100.0 7.1E-40 2.4E-44  297.2  15.5  239  110-363    27-297 (311)
 65 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.3E-40 7.9E-45  315.4  12.4  229  112-363   192-430 (452)
 66 3tt0_A Basic fibroblast growth 100.0 4.7E-40 1.6E-44  306.9  14.2  218  129-363   103-342 (382)
 67 1kob_A Twitchin; kinase, intra 100.0 3.2E-40 1.1E-44  307.7  12.9  232  110-363    57-301 (387)
 68 3q4u_A Activin receptor type-1 100.0 7.2E-40 2.5E-44  295.4  14.8  240  109-363    13-292 (301)
 69 2y94_A 5'-AMP-activated protei 100.0   1E-39 3.5E-44  311.5  16.3  226  111-363    23-263 (476)
 70 2qol_A Ephrin receptor; recept 100.0 5.3E-40 1.8E-44  305.3  14.0  233  109-363    50-299 (373)
 71 1luf_A Muscle-specific tyrosin 100.0 4.1E-40 1.4E-44  302.6  13.0  237  110-363    53-325 (343)
 72 2i0e_A Protein kinase C-beta I 100.0 1.3E-39 4.4E-44  300.2  16.3  226  110-361    26-266 (353)
 73 4eqm_A Protein kinase; transfe 100.0 4.4E-40 1.5E-44  296.2  12.9  230  111-360    18-261 (294)
 74 3dtc_A Mitogen-activated prote 100.0 2.7E-40 9.1E-45  293.9  11.2  227  110-363    13-263 (271)
 75 3a8x_A Protein kinase C IOTA t 100.0 1.5E-39   5E-44  299.1  16.4  234  110-361    15-264 (345)
 76 3gni_B Strad alpha; kinase fol 100.0 1.1E-39 3.6E-44  305.2  15.6  245  112-363    33-330 (389)
 77 3o0g_A Cell division protein k 100.0 9.1E-40 3.1E-44  293.8  14.5  240  110-363     8-279 (292)
 78 2ivs_A Proto-oncogene tyrosine 100.0 7.8E-40 2.7E-44  297.0  14.1  235  112-363    31-301 (314)
 79 2w4o_A Calcium/calmodulin-depe 100.0 4.1E-40 1.4E-44  303.5  12.2  230  111-363    60-302 (349)
 80 3vhe_A Vascular endothelial gr 100.0 2.7E-40 9.1E-45  305.8  10.9  236  112-363    30-345 (359)
 81 3kfa_A Tyrosine-protein kinase 100.0 4.2E-40 1.4E-44  295.2  11.5  232  110-363    19-261 (288)
 82 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.7E-39   6E-44  313.5  16.6  235  110-362   191-439 (543)
 83 3is5_A Calcium-dependent prote 100.0 7.4E-40 2.5E-44  293.4  13.0  234  110-363    28-275 (285)
 84 2eue_A Carbon catabolite derep 100.0 1.1E-39 3.8E-44  290.6  13.8  227  109-363    18-259 (275)
 85 2yex_A Serine/threonine-protei 100.0 3.3E-39 1.1E-43  287.4  16.8  233  110-363    13-258 (276)
 86 3qd2_B Eukaryotic translation  100.0 1.7E-39 5.7E-44  296.9  15.1  232  110-363    12-322 (332)
 87 3kmu_A ILK, integrin-linked ki 100.0 7.4E-40 2.5E-44  290.7  12.3  228  109-363    15-260 (271)
 88 1rjb_A FL cytokine receptor; k 100.0 7.7E-40 2.6E-44  301.0  12.8  237  111-363    52-324 (344)
 89 3t9t_A Tyrosine-protein kinase 100.0   1E-39 3.5E-44  289.3  13.2  231  110-363    14-254 (267)
 90 1ob3_A PFPK5, cell division co 100.0 9.7E-40 3.3E-44  293.0  12.8  239  110-363     8-277 (288)
 91 3v8s_A RHO-associated protein  100.0 4.9E-40 1.7E-44  308.3  11.2  232  110-363    75-326 (410)
 92 1nxk_A MAP kinase-activated pr 100.0 5.6E-40 1.9E-44  307.9  11.6  232  111-363    69-318 (400)
 93 3i6u_A CDS1, serine/threonine- 100.0   6E-40   2E-44  309.6  11.8  230  111-363   142-396 (419)
 94 3ugc_A Tyrosine-protein kinase 100.0 6.6E-40 2.2E-44  295.1  11.5  239  111-363    17-281 (295)
 95 3f3z_A Calcium/calmodulin-depe 100.0 9.5E-40 3.3E-44  291.3  12.4  230  111-363    16-258 (277)
 96 2qr7_A Ribosomal protein S6 ki 100.0 2.9E-39 9.8E-44  296.8  15.6  232  110-363    28-274 (342)
 97 3dls_A PAS domain-containing s 100.0   1E-39 3.5E-44  299.2  12.6  221  110-363    30-271 (335)
 98 3kex_A Receptor tyrosine-prote 100.0 5.1E-40 1.7E-44  300.0  10.5  231  110-363    19-266 (325)
 99 4aw2_A Serine/threonine-protei 100.0 9.4E-40 3.2E-44  308.7  12.4  234  110-363    80-335 (437)
100 2izr_A Casein kinase I isoform 100.0 8.5E-40 2.9E-44  299.2  11.8  235  110-362    15-270 (330)
101 2a2a_A Death-associated protei 100.0 1.2E-39   4E-44  297.1  12.2  231  110-363    18-269 (321)
102 3g33_A Cell division protein k 100.0 4.7E-39 1.6E-43  291.3  16.1  239  110-363    15-293 (308)
103 4f0f_A Serine/threonine-protei 100.0 4.6E-39 1.6E-43  288.3  15.8  227  111-363    26-279 (287)
104 3a62_A Ribosomal protein S6 ki 100.0 2.2E-39 7.5E-44  296.0  13.9  226  111-362    24-267 (327)
105 3g2f_A Bone morphogenetic prot 100.0 1.7E-39 5.7E-44  297.8  13.0  242  110-363    19-308 (336)
106 3kk8_A Calcium/calmodulin depe 100.0 2.5E-39 8.7E-44  289.5  13.7  231  110-363    12-258 (284)
107 1mp8_A Focal adhesion kinase 1 100.0   2E-39 6.7E-44  290.0  13.0  229  111-363    22-266 (281)
108 2r5t_A Serine/threonine-protei 100.0 1.7E-39 5.9E-44  301.4  13.0  226  111-362    45-285 (373)
109 3mdy_A Bone morphogenetic prot 100.0 2.6E-39 8.9E-44  296.4  14.0  238  110-363    43-321 (337)
110 1qpc_A LCK kinase; alpha beta  100.0 2.6E-39 8.9E-44  288.8  13.5  231  110-363    19-259 (279)
111 3p1a_A MYT1 kinase, membrane-a 100.0 2.1E-39 7.1E-44  294.2  13.1  225  111-363    64-301 (311)
112 3brb_A Proto-oncogene tyrosine 100.0 5.9E-39   2E-43  291.3  15.9  236  111-363    41-298 (313)
113 2h8h_A Proto-oncogene tyrosine 100.0 7.2E-40 2.5E-44  318.1  10.3  229  112-363   275-513 (535)
114 2acx_A G protein-coupled recep 100.0   2E-39 6.8E-44  314.0  13.3  231  110-361   190-434 (576)
115 1t46_A HOMO sapiens V-KIT hard 100.0 1.1E-39 3.8E-44  295.8  10.8  236  112-363    31-297 (313)
116 3lij_A Calcium/calmodulin depe 100.0 2.8E-39 9.6E-44  311.5  14.2  230  111-363    44-288 (494)
117 3lzb_A Epidermal growth factor 100.0 3.4E-39 1.2E-43  294.8  13.8  230  111-363    22-268 (327)
118 1u5q_A Serine/threonine protei 100.0 2.1E-39   7E-44  298.6  12.5  226  110-363    60-302 (348)
119 2ozo_A Tyrosine-protein kinase 100.0 3.8E-39 1.3E-43  317.5  15.0  230  111-363   343-588 (613)
120 3n9x_A Phosphotransferase; mal 100.0 2.9E-39 9.9E-44  306.2  13.5  183  110-302    32-253 (432)
121 1csn_A Casein kinase-1; phosph 100.0 3.1E-39 1.1E-43  290.8  13.1  237  110-363    16-273 (298)
122 3mwu_A Calmodulin-domain prote 100.0 3.9E-39 1.3E-43  309.9  14.4  231  110-363    28-273 (486)
123 2pvf_A Fibroblast growth facto 100.0 5.9E-39   2E-43  294.1  14.9  235  112-363    43-308 (334)
124 3q5i_A Protein kinase; CDPK, m 100.0 1.8E-39 6.2E-44  313.5  12.1  231  110-363    42-298 (504)
125 4eut_A Serine/threonine-protei 100.0   9E-39 3.1E-43  299.6  16.3  241  110-363    15-299 (396)
126 3dbq_A Dual specificity protei 100.0 1.5E-39 5.1E-44  299.1  10.8  230  111-363    16-270 (343)
127 4agu_A Cyclin-dependent kinase 100.0 1.7E-39   6E-44  294.4  11.0  243  110-363     9-281 (311)
128 3og7_A AKAP9-BRAF fusion prote 100.0   3E-39   1E-43  290.0  12.4  235  110-363    30-278 (289)
129 3nyv_A Calmodulin-domain prote 100.0 1.9E-39 6.4E-44  312.1  11.8  230  111-363    33-278 (484)
130 3llt_A Serine/threonine kinase 100.0   3E-39   1E-43  299.0  12.7  183  110-305    41-263 (360)
131 3ttj_A Mitogen-activated prote 100.0 2.8E-39 9.6E-44  308.5  12.8  239  110-363    68-352 (464)
132 2ac3_A MAP kinase-interacting  100.0 5.2E-39 1.8E-43  292.0  13.9  240  112-363    21-292 (316)
133 3ork_A Serine/threonine protei 100.0 1.8E-39   6E-44  294.6  10.6  233  110-362    18-269 (311)
134 1vzo_A Ribosomal protein S6 ki 100.0 1.3E-39 4.4E-44  300.9   9.9  230  110-360    60-310 (355)
135 3hko_A Calcium/calmodulin-depe 100.0 1.8E-39 6.2E-44  298.6  10.8  240  110-363    32-327 (345)
136 3cok_A Serine/threonine-protei 100.0 7.3E-39 2.5E-43  285.7  14.3  227  112-363    19-259 (278)
137 2vd5_A DMPK protein; serine/th 100.0 2.9E-39 9.8E-44  303.3  12.2  229  110-359    67-317 (412)
138 1u59_A Tyrosine-protein kinase 100.0 4.1E-39 1.4E-43  288.8  12.7  229  112-363    18-262 (287)
139 4e5w_A Tyrosine-protein kinase 100.0 8.6E-39 2.9E-43  288.6  14.9  238  112-363    29-292 (302)
140 2eva_A TAK1 kinase - TAB1 chim 100.0 3.1E-39 1.1E-43  292.4  11.7  231  110-363    14-253 (307)
141 3fdn_A Serine/threonine-protei 100.0 3.3E-39 1.1E-43  288.2  11.3  225  111-363    16-254 (279)
142 1t4h_A Serine/threonine-protei 100.0 7.6E-39 2.6E-43  287.4  13.7  227  112-363    34-279 (290)
143 3lxp_A Non-receptor tyrosine-p 100.0 4.3E-39 1.5E-43  293.0  12.0  237  111-363    38-300 (318)
144 1mqb_A Ephrin type-A receptor  100.0   1E-38 3.5E-43  292.4  14.5  232  110-363    50-299 (333)
145 3rp9_A Mitogen-activated prote 100.0 7.5E-39 2.6E-43  305.8  14.1  178  110-297    59-280 (458)
146 4fl3_A Tyrosine-protein kinase 100.0   3E-39   1E-43  319.0  11.7  228  112-363   377-621 (635)
147 1xbb_A Tyrosine-protein kinase 100.0 8.8E-39   3E-43  287.2  13.5  228  112-363    25-269 (291)
148 3lm5_A Serine/threonine-protei 100.0 5.2E-39 1.8E-43  293.6  12.2  231  112-363    37-284 (327)
149 1fvr_A Tyrosine-protein kinase 100.0 6.4E-39 2.2E-43  292.9  12.8  233  111-363    32-290 (327)
150 4ejn_A RAC-alpha serine/threon 100.0   3E-39   1E-43  307.4  10.9  224  111-359   155-392 (446)
151 1p4o_A Insulin-like growth fac 100.0 7.8E-39 2.7E-43  291.6  13.2  235  112-363    33-289 (322)
152 2zmd_A Dual specificity protei 100.0 1.3E-38 4.5E-43  297.7  15.0  231  110-363    62-317 (390)
153 2jam_A Calcium/calmodulin-depe 100.0 7.2E-39 2.5E-43  289.6  12.8  230  110-363    15-258 (304)
154 3gxj_A TGF-beta receptor type- 100.0 5.5E-40 1.9E-44  296.4   5.4  239  109-363     8-287 (303)
155 1byg_A CSK, protein (C-termina 100.0 4.7E-39 1.6E-43  287.0  11.1  227  110-363    27-263 (278)
156 4aaa_A Cyclin-dependent kinase 100.0 5.2E-39 1.8E-43  294.0  11.6  243  110-363    31-303 (331)
157 3oz6_A Mitogen-activated prote 100.0 1.1E-38 3.6E-43  298.4  13.8  186  110-306    15-236 (388)
158 3c1x_A Hepatocyte growth facto 100.0 6.7E-39 2.3E-43  297.7  12.2  231  111-363    96-345 (373)
159 3op5_A Serine/threonine-protei 100.0   2E-38 6.7E-43  294.0  15.2  238  111-363    42-319 (364)
160 2h34_A Serine/threonine-protei 100.0 7.6E-39 2.6E-43  290.2  12.2  230  111-362    41-285 (309)
161 3pfq_A PKC-B, PKC-beta, protei 100.0 2.8E-38 9.7E-43  314.1  17.3  224  112-361   349-587 (674)
162 2y7j_A Phosphorylase B kinase  100.0 6.7E-39 2.3E-43  297.1  12.0  231  110-363   100-356 (365)
163 3bhy_A Death-associated protei 100.0 4.9E-39 1.7E-43  287.5  10.6  231  110-363    11-262 (283)
164 4fvq_A Tyrosine-protein kinase 100.0 3.4E-39 1.2E-43  289.4   9.6  224  111-363    15-265 (289)
165 2owb_A Serine/threonine-protei 100.0 1.5E-38 5.1E-43  291.5  14.0  226  112-363    49-288 (335)
166 2clq_A Mitogen-activated prote 100.0 2.5E-38 8.4E-43  284.5  15.1  233  111-363    29-275 (295)
167 2vgo_A Serine/threonine-protei 100.0 7.1E-39 2.4E-43  286.7  11.4  225  111-363    21-259 (284)
168 3cc6_A Protein tyrosine kinase 100.0 9.6E-39 3.3E-43  285.5  12.2  229  111-363    19-263 (281)
169 2yfx_A Tyrosine-protein kinase 100.0 9.5E-39 3.2E-43  291.8  12.4  237  110-363    36-294 (327)
170 2rku_A Serine/threonine-protei 100.0 2.1E-38 7.1E-43  285.1  14.3  227  111-363    22-262 (294)
171 2i1m_A Macrophage colony-stimu 100.0 4.6E-39 1.6E-43  294.5  10.1  236  112-363    54-316 (333)
172 3nsz_A CK II alpha, casein kin 100.0 1.6E-38 5.6E-43  290.4  13.8  236  111-363    43-316 (330)
173 3mtl_A Cell division protein k 100.0   4E-39 1.4E-43  293.9   9.5  239  110-363     8-278 (324)
174 3pls_A Macrophage-stimulating  100.0 1.7E-38 5.8E-43  286.0  13.5  232  111-363    28-277 (298)
175 3f66_A Hepatocyte growth facto 100.0 1.8E-38 6.3E-43  286.0  13.7  231  111-363    32-281 (298)
176 1b6c_B TGF-B superfamily recep 100.0 3.3E-38 1.1E-42  289.8  15.5  238  110-363    48-326 (342)
177 1cm8_A Phosphorylated MAP kina 100.0 2.2E-38 7.6E-43  293.8  14.3  238  110-363    31-304 (367)
178 2wtk_C Serine/threonine-protei 100.0 3.2E-38 1.1E-42  285.2  14.9  232  109-363    10-260 (305)
179 1ua2_A CAK, cell division prot 100.0 1.4E-38 4.9E-43  292.9  12.8  239  110-363    16-288 (346)
180 3a7i_A MST3 kinase, serine/thr 100.0 2.2E-38 7.5E-43  286.2  13.6  228  110-363    28-267 (303)
181 2xir_A Vascular endothelial gr 100.0 6.8E-39 2.3E-43  291.0  10.3  236  112-363    35-300 (316)
182 3lxl_A Tyrosine-protein kinase 100.0 1.8E-38 6.1E-43  290.0  13.0  240  110-363    29-293 (327)
183 2h6d_A 5'-AMP-activated protei 100.0 1.9E-38 6.6E-43  282.6  12.8  225  112-363    19-258 (276)
184 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.8E-39 2.7E-43  292.7  10.4  237  111-363    41-315 (329)
185 2v62_A Serine/threonine-protei 100.0 3.5E-38 1.2E-42  290.2  14.8  240  110-363    43-318 (345)
186 1x8b_A WEE1HU, WEE1-like prote 100.0 1.2E-38 4.3E-43  285.2  11.5  226  110-363    17-276 (289)
187 2ycf_A Serine/threonine-protei 100.0 1.2E-38   4E-43  290.5  11.3  231  110-363    16-271 (322)
188 2w5a_A Serine/threonine-protei 100.0   8E-39 2.7E-43  285.5   9.9  233  110-363    12-264 (279)
189 3com_A Serine/threonine-protei 100.0 6.1E-38 2.1E-42  284.7  15.6  231  110-363    35-275 (314)
190 3kvw_A DYRK2, dual specificity 100.0 2.3E-38 7.8E-43  299.6  13.2  183  111-306   104-304 (429)
191 2x7f_A TRAF2 and NCK-interacti 100.0 1.6E-38 5.6E-43  290.0  11.8  231  111-363    31-283 (326)
192 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.7E-37   6E-42  287.7  18.8  227  110-361    71-326 (365)
193 3mi9_A Cell division protein k 100.0 6.3E-38 2.2E-42  289.1  15.5  241  110-363    23-308 (351)
194 1phk_A Phosphorylase kinase; g 100.0 2.3E-38 7.8E-43  285.3  12.2  229  112-363    25-280 (298)
195 2a19_B Interferon-induced, dou 100.0 2.7E-38 9.2E-43  282.6  12.6  222  110-363    17-264 (284)
196 2j7t_A Serine/threonine-protei 100.0 2.4E-38 8.4E-43  285.6  12.3  232  110-363    25-272 (302)
197 2pml_X PFPK7, Ser/Thr protein  100.0 3.9E-38 1.3E-42  290.0  13.5  242  109-363    36-319 (348)
198 2r3i_A Cell division protein k 100.0 6.3E-38 2.1E-42  282.5  14.5  240  110-363     9-280 (299)
199 2vwi_A Serine/threonine-protei 100.0 1.2E-38 4.1E-43  287.6   9.7  244  110-363    21-284 (303)
200 3eqc_A Dual specificity mitoge 100.0   6E-39   2E-43  297.0   7.9  235  110-363    39-321 (360)
201 4hgt_A Casein kinase I isoform 100.0 7.8E-38 2.7E-42  281.3  14.7  237  110-363    15-270 (296)
202 2w1i_A JAK2; chromosomal rearr 100.0 4.4E-38 1.5E-42  287.3  13.1  240  110-363    47-312 (326)
203 1wak_A Serine/threonine-protei 100.0   6E-38 2.1E-42  293.7  13.5  241  110-363    43-388 (397)
204 2wqm_A Serine/threonine-protei 100.0 3.6E-38 1.2E-42  285.7  11.2  234  112-363    40-287 (310)
205 3e3p_A Protein kinase, putativ 100.0 5.8E-38   2E-42  290.2  12.7  245  110-363    29-311 (360)
206 3uzp_A CKI-delta, CKID, casein 100.0 1.5E-37 5.2E-42  279.5  15.0  236  111-363    16-270 (296)
207 3q60_A ROP5B; pseudokinase, tr 100.0 9.7E-39 3.3E-43  296.8   7.2  234  110-363    68-349 (371)
208 3fme_A Dual specificity mitoge 100.0 1.9E-38 6.7E-43  284.5   8.9  233  110-363    13-263 (290)
209 2buj_A Serine/threonine-protei 100.0 2.2E-38 7.6E-43  287.9   9.3  237  110-363    35-296 (317)
210 1zy4_A Serine/threonine-protei 100.0 5.8E-38   2E-42  282.9  11.9  232  111-363    13-280 (303)
211 3eb0_A Putative uncharacterize 100.0 2.3E-38 7.9E-43  295.5   9.5  242  110-363    13-318 (383)
212 1z57_A Dual specificity protei 100.0 1.2E-37 4.1E-42  285.2  14.0  239  112-363    22-325 (339)
213 3qyz_A Mitogen-activated prote 100.0 6.3E-38 2.1E-42  290.6  12.2  241  112-363    35-310 (364)
214 2rio_A Serine/threonine-protei 100.0 1.2E-37 4.1E-42  295.2  13.9  236  112-363    23-292 (434)
215 2xrw_A Mitogen-activated prote 100.0 1.2E-37 4.1E-42  289.5  13.6  239  110-363    31-315 (371)
216 2jii_A Serine/threonine-protei 100.0   3E-38   1E-42  291.5   9.2  236  112-363    50-326 (352)
217 1u46_A ACK-1, activated CDC42  100.0 6.4E-38 2.2E-42  281.3  10.9  232  110-363    24-274 (291)
218 3an0_A Dual specificity mitoge 100.0 2.8E-38 9.7E-43  290.1   8.6  232  111-363    58-307 (340)
219 3rgf_A Cyclin-dependent kinase 100.0 1.5E-37 5.2E-42  292.1  13.6  190  111-305    28-240 (405)
220 2wei_A Calmodulin-domain prote 100.0 7.5E-38 2.6E-42  280.6  10.9  230  111-363    29-273 (287)
221 4e7w_A Glycogen synthase kinas 100.0 3.7E-38 1.3E-42  295.1   9.2  242  110-363    46-318 (394)
222 3byv_A Rhoptry kinase; malaria 100.0 1.1E-38 3.9E-43  297.0   5.3  225  110-363    79-356 (377)
223 2fst_X Mitogen-activated prote 100.0 6.1E-38 2.1E-42  290.7   9.8  238  110-363    35-308 (367)
224 3fhr_A MAP kinase-activated pr 100.0 1.9E-37 6.4E-42  284.3  12.7  230  112-363    37-284 (336)
225 1j1b_A Glycogen synthase kinas 100.0 5.1E-38 1.7E-42  296.5   8.6  242  110-363    60-333 (420)
226 3pg1_A Mitogen-activated prote 100.0 9.6E-38 3.3E-42  289.1  10.0  239  110-363    28-313 (362)
227 2j0j_A Focal adhesion kinase 1 100.0 2.9E-37   1E-41  305.9  13.7  230  110-363   396-641 (656)
228 2eu9_A Dual specificity protei 100.0 6.5E-37 2.2E-41  282.3  15.0  239  112-363    27-330 (355)
229 4exu_A Mitogen-activated prote 100.0 4.6E-37 1.6E-41  285.5  13.4  237  110-363    48-320 (371)
230 2vx3_A Dual specificity tyrosi 100.0 6.5E-37 2.2E-41  285.6  14.4  186  110-306    60-263 (382)
231 1blx_A Cyclin-dependent kinase 100.0 6.8E-37 2.3E-41  279.1  14.1  239  110-363    17-293 (326)
232 2b9h_A MAP kinase FUS3, mitoge 100.0 1.5E-37 5.3E-42  286.6   9.8  242  111-363    18-302 (353)
233 3p23_A Serine/threonine-protei 100.0 4.2E-37 1.4E-41  290.9  13.0  231  110-363    30-280 (432)
234 3a99_A Proto-oncogene serine/t 100.0 1.1E-37 3.7E-42  284.0   8.5  218  112-363    51-290 (320)
235 3sv0_A Casein kinase I-like; t 100.0 8.6E-37 2.9E-41  291.8  15.0  238  109-363    12-268 (483)
236 1q8y_A SR protein kinase; tran 100.0 4.7E-37 1.6E-41  285.4  12.1  240  111-363    26-330 (373)
237 3aln_A Dual specificity mitoge 100.0 3.1E-37 1.1E-41  281.7  10.4  238  109-363    27-282 (327)
238 2iwi_A Serine/threonine-protei 100.0 1.4E-37 4.7E-42  282.1   7.7  219  111-363    38-280 (312)
239 3ll6_A Cyclin G-associated kin 100.0   2E-37   7E-42  283.6   8.9  228  112-363    36-298 (337)
240 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.5E-37 8.5E-42  281.2   8.8  231  110-363    39-292 (319)
241 3cek_A Dual specificity protei 100.0 4.4E-37 1.5E-41  279.0  10.3  231  110-363    34-289 (313)
242 3coi_A Mitogen-activated prote 100.0 1.3E-36 4.6E-41  280.5  13.1  237  110-363    30-302 (353)
243 2i6l_A Mitogen-activated prote 100.0 4.1E-37 1.4E-41  279.6   9.5  243  110-363    17-302 (320)
244 3qa8_A MGC80376 protein; kinas 100.0 8.7E-36   3E-40  291.6  17.6  247  108-363    18-294 (676)
245 2dyl_A Dual specificity mitoge 100.0 1.1E-35 3.7E-40  270.1  15.3  231  110-363    31-280 (318)
246 3m2w_A MAP kinase-activated pr 100.0 1.1E-35 3.8E-40  268.0  11.5  218  112-363    26-253 (299)
247 2pzi_A Probable serine/threoni 100.0 3.9E-35 1.3E-39  292.9  13.3  213  111-362    87-316 (681)
248 3uqc_A Probable conserved tran 100.0 7.6E-35 2.6E-39  260.8   9.9  210  112-363    39-255 (286)
249 2vuw_A Serine/threonine-protei 100.0   2E-35 6.9E-40  270.8   5.7  222  109-354    25-323 (336)
250 3dzo_A Rhoptry kinase domain;  100.0 5.5E-34 1.9E-38  268.4   8.3  223  111-362    85-359 (413)
251 4azs_A Methyltransferase WBDD; 100.0 5.4E-32 1.9E-36  263.6   6.8  163  124-300   256-437 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 1.2E-25 4.2E-30  217.7   8.5  173  110-301   342-538 (540)
253 1zar_A RIO2 kinase; serine kin  99.8 1.5E-20   5E-25  167.4   6.9  136  110-281    96-251 (282)
254 1zth_A RIO1 serine protein kin  99.7   4E-18 1.4E-22  149.8   8.5  131  110-258    53-220 (258)
255 4gyi_A RIO2 kinase; protein ki  99.5 7.9E-15 2.7E-19  134.3   4.5  130  110-258   101-266 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.2 3.3E-11 1.1E-15  105.6  10.2  120  126-256    36-213 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.1 2.2E-10 7.5E-15  100.0  10.7  114  128-257    45-215 (264)
258 3dxp_A Putative acyl-COA dehyd  99.0 8.6E-10 2.9E-14  101.2  11.1  130  121-258    55-250 (359)
259 3sg8_A APH(2'')-ID; antibiotic  98.9 5.8E-10   2E-14   99.9   5.4  177  116-301    29-287 (304)
260 3r70_A Aminoglycoside phosphot  98.6 1.2E-07   4E-12   85.4  10.1  132  115-259    45-240 (320)
261 3tdw_A Gentamicin resistance p  98.5   8E-07 2.7E-11   79.5  10.9  128  122-258    34-226 (306)
262 4gkh_A Aminoglycoside 3'-phosp  98.3   2E-06 6.9E-11   75.2   9.7  117  129-257    52-224 (272)
263 3ovc_A Hygromycin-B 4-O-kinase  98.1 7.2E-06 2.5E-10   75.0   8.3   57  126-186    63-122 (362)
264 3ats_A Putative uncharacterize  98.1 1.1E-05 3.8E-10   73.5   8.8   59  128-186    53-121 (357)
265 2q83_A YTAA protein; 2635576,   97.8 0.00022 7.5E-09   64.2  11.9   32  225-256   221-252 (346)
266 3d1u_A Putative fructosamine-3  97.7 0.00032 1.1E-08   61.9  10.9   55  127-185    39-97  (288)
267 3dxq_A Choline/ethanolamine ki  97.5 0.00045 1.5E-08   61.2   9.2   32  226-258   173-204 (301)
268 3jr1_A Putative fructosamine-3  97.3  0.0012   4E-08   58.9  10.1   62  122-185    54-118 (312)
269 3feg_A Choline/ethanolamine ki  97.3 0.00092 3.2E-08   61.2   9.6  124  128-256    83-254 (379)
270 2olc_A MTR kinase, methylthior  97.3 0.00044 1.5E-08   63.8   7.0   32  226-258   227-258 (397)
271 2pyw_A Uncharacterized protein  96.8  0.0074 2.5E-07   56.0  11.0   32  226-258   232-263 (420)
272 3csv_A Aminoglycoside phosphot  96.8   0.012 3.9E-07   52.7  11.7   34  226-259   183-220 (333)
273 2yle_A Protein spire homolog 1  96.8  0.0023 7.7E-08   53.2   6.1   96  183-300    33-135 (229)
274 2ppq_A HSK, HK, homoserine kin  96.7  0.0035 1.2E-07   55.8   7.6  129  127-256    45-217 (322)
275 1zyl_A Hypothetical protein YI  96.6   0.028 9.7E-07   49.9  13.0  128  129-258    51-225 (328)
276 1nw1_A Choline kinase (49.2 KD  96.5   0.011 3.7E-07   55.1   9.4   53  128-185   106-159 (429)
277 2qg7_A Ethanolamine kinase PV0  96.4   0.009 3.1E-07   56.1   8.2   54  128-185   134-188 (458)
278 3c5i_A Choline kinase; choline  96.2  0.0058   2E-07   55.6   6.1   30  226-256   212-241 (369)
279 3f2s_A CK, chetk-alpha, cholin  95.6   0.066 2.3E-06   49.1  10.0   32  225-256   243-280 (401)
280 3f7w_A Putative fructosamine-3  95.4   0.072 2.5E-06   46.4   9.5   62  120-185    31-97  (288)
281 3mes_A Choline kinase; malaria  94.9   0.086   3E-06   48.8   8.7   31  226-257   262-292 (424)
282 3i1a_A Spectinomycin phosphotr  89.9    0.31   1E-05   43.6   4.7   33  226-258   206-238 (339)
283 4ano_A ESSB; membrane protein,  88.2     1.6 5.4E-05   36.2   7.4  117  156-306    48-167 (219)
284 4ann_A ESSB; membrane protein,  86.7     1.5 5.1E-05   36.2   6.4  125  148-306    36-162 (215)
285 3g15_A CK, chetk-alpha, cholin  76.0     1.4   5E-05   40.1   2.9   30  227-256   245-280 (401)
286 3oja_A Leucine-rich immune mol  69.1    0.38 1.3E-05   45.3  -2.9   30  142-171   323-352 (487)
287 1cja_A Protein (actin-fragmin   50.2      75  0.0026   28.0   8.5  133  115-258    79-239 (342)
288 3cxl_A N-chimerin; SH2, RHO-GA  37.6     5.8  0.0002   36.9  -0.5   55  114-168   149-214 (463)
289 3i1a_A Spectinomycin phosphotr  37.4 1.3E+02  0.0043   26.2   8.3   76  127-222    46-130 (339)
290 2x6h_A GH13170P, VPS34, phosph  25.5      38  0.0013   33.2   2.8   45  204-255   529-575 (696)

No 1  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=1.2e-52  Score=376.75  Aligned_cols=237  Identities=22%  Similarity=0.328  Sum_probs=189.6

Q ss_pred             ccccccccCCcceeecc-------CCeeEEEEcccCCc-ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccC
Q 039471          110 QSLISFNLTNSKFFFLH-------SNEIAVKMLEHLKG-NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMP  181 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~-------~~~vAvK~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  181 (363)
                      ..+|.|++|.++.....       +..||||+++.... ..++|.+|++++++++|||||+++|+|.+++..+||||||+
T Consensus        19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~   98 (299)
T 4asz_A           19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMK   98 (299)
T ss_dssp             EEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCC
Confidence            44677777777665432       23499999975432 34689999999999999999999999999999999999999


Q ss_pred             CCCHHHHhhhcCC-------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccc
Q 039471          182 NGSLQKFIFSKTN-------SSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLA  254 (363)
Q Consensus       182 ~~sL~~~l~~~~~-------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a  254 (363)
                      +|+|.+++.....       ......+++..+..++.||+.||+|||+   ++|+||||||+|||+++++.+||+|||+|
T Consensus        99 ~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki~DFGla  175 (299)
T 4asz_A           99 HGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMS  175 (299)
T ss_dssp             TCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCSCH
T ss_pred             CCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEECCcccc
Confidence            9999999975421       1234679999999999999999999999   99999999999999999999999999999


Q ss_pred             eeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhcc
Q 039471          255 KLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQ  325 (363)
Q Consensus       255 ~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (363)
                      +...............||+.|+|||++        +|||||||++|||+| |+.||.......        +...+..+.
T Consensus       176 ~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~--------~~~~i~~~~  247 (299)
T 4asz_A          176 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--------VIECITQGR  247 (299)
T ss_dssp             HHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--------HHHHHHHTC
T ss_pred             eecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--------HHHHHHcCC
Confidence            877655443333445689999999998        899999999999998 899997643321        333444333


Q ss_pred             ccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          326 ELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       326 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..      ..+..+++++.+++.+||+.||++||||+|
T Consensus       248 ~~------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~  279 (299)
T 4asz_A          248 VL------QRPRTCPQEVYELMLGCWQREPHMRKNIKG  279 (299)
T ss_dssp             CC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CC------CCCccchHHHHHHHHHHcCCChhHCcCHHH
Confidence            22      233456778999999999999999999864


No 2  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=3.5e-52  Score=375.30  Aligned_cols=237  Identities=21%  Similarity=0.295  Sum_probs=191.1

Q ss_pred             ccccccccCCcceeecc-------CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEecc
Q 039471          110 QSLISFNLTNSKFFFLH-------SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~-------~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      .++|.|+||.++...+.       +..||||+++...  ...++|.+|+.++++++|||||+++|+|.+++..+||||||
T Consensus        32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~  111 (308)
T 4gt4_A           32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYC  111 (308)
T ss_dssp             EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcC
Confidence            45777788877766542       2349999997433  33478999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhhcCCC----------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEec
Q 039471          181 PNGSLQKFIFSKTNS----------SSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISD  250 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~D  250 (363)
                      ++|+|.+++......          .....+++..+..++.||+.||+|||+   .+|+||||||+|||+++++.+||+|
T Consensus       112 ~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~~Ki~D  188 (308)
T 4gt4_A          112 SHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISD  188 (308)
T ss_dssp             SSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             CCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCCCEEECC
Confidence            999999999654321          123569999999999999999999999   9999999999999999999999999


Q ss_pred             cccceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHh
Q 039471          251 FGLAKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRM  321 (363)
Q Consensus       251 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~  321 (363)
                      ||+|+...............||+.|+|||++        +|||||||++|||+| |+.||.......        +...+
T Consensus       189 FGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~--------~~~~i  260 (308)
T 4gt4_A          189 LGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD--------VVEMI  260 (308)
T ss_dssp             SCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH--------HHHHH
T ss_pred             cccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH--------HHHHH
Confidence            9999877654433333556799999999998        899999999999998 889987643321        33333


Q ss_pred             hhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          322 RLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+...      +.+..++..+.+++.+||+.||++||||+|
T Consensus       261 ~~~~~~------~~p~~~~~~~~~li~~C~~~dP~~RPs~~e  296 (308)
T 4gt4_A          261 RNRQVL------PCPDDCPAWVYALMIECWNEFPSRRPRFKD  296 (308)
T ss_dssp             HTTCCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HcCCCC------CCcccchHHHHHHHHHHcCCChhHCcCHHH
Confidence            333322      233456778999999999999999999864


No 3  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=1.1e-51  Score=370.73  Aligned_cols=235  Identities=24%  Similarity=0.345  Sum_probs=180.4

Q ss_pred             ccccccccCCcceeeccCCeeEEEEcccCCc---ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHH
Q 039471          110 QSLISFNLTNSKFFFLHSNEIAVKMLEHLKG---NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~  186 (363)
                      .++|.|++|.++...+. +.||||+++....   ..++|.+|+.++++++|||||+++|++.+ +..+||||||++|+|.
T Consensus        42 ~~iG~G~fG~Vy~~~~~-~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGsL~  119 (307)
T 3omv_A           42 TRIGSGSFGTVYKGKWH-GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLY  119 (307)
T ss_dssp             EECCCCSSSEEEEEESS-SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCBHH
T ss_pred             eEEeeCCCcEEEEEEEC-CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCCHH
Confidence            45677777777666544 4699999974432   23679999999999999999999998865 5689999999999999


Q ss_pred             HHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccc
Q 039471          187 KFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSR  266 (363)
Q Consensus       187 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~  266 (363)
                      +++....     ..+++..+..|+.||+.||+|||+   .+|+||||||+|||+++++.+||+|||+|+...........
T Consensus       120 ~~l~~~~-----~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~  191 (307)
T 3omv_A          120 KHLHVQE-----TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV  191 (307)
T ss_dssp             HHHHTSC-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC----------
T ss_pred             HHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceee
Confidence            9996432     569999999999999999999999   99999999999999999999999999999877654333333


Q ss_pred             ccccccccccCCccc-----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          267 TAARGTSGYIAPELF-----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       267 ~~~~gt~~y~aPE~~-----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                      ....||+.|+|||++           +|||||||++|||+||+.||.......       .+...+..+..  .......
T Consensus       192 ~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-------~~~~~~~~~~~--~p~~~~~  262 (307)
T 3omv_A          192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-------QIIFMVGRGYA--SPDLSKL  262 (307)
T ss_dssp             --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-------HHHHHHHTTCC--CCCSTTS
T ss_pred             cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-------HHHHHHhcCCC--CCCcccc
Confidence            556799999999986           799999999999999999997543221       12222222211  1111223


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +..+++.+.+++.+||+.||++||||+|
T Consensus       263 ~~~~~~~l~~li~~cl~~dP~~RPs~~e  290 (307)
T 3omv_A          263 YKNCPKAMKRLVADCVKKVKEERPLFPQ  290 (307)
T ss_dssp             CTTSCHHHHHHHHHHTCSSSTTSCCHHH
T ss_pred             cccchHHHHHHHHHHcCCCHhHCcCHHH
Confidence            4456788999999999999999999864


No 4  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=4.6e-52  Score=377.89  Aligned_cols=237  Identities=23%  Similarity=0.343  Sum_probs=181.6

Q ss_pred             ccccccccCCcceeecc-------CCeeEEEEcccCC-cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccC
Q 039471          110 QSLISFNLTNSKFFFLH-------SNEIAVKMLEHLK-GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMP  181 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~-------~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  181 (363)
                      .++|.+++|.++.....       +..||||+++... ...++|.+|++++++++|||||+++|+|.++...+||||||+
T Consensus        47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~  126 (329)
T 4aoj_A           47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMR  126 (329)
T ss_dssp             EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            34677777777665432       2349999997543 234689999999999999999999999999999999999999


Q ss_pred             CCCHHHHhhhcCCC---------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccc
Q 039471          182 NGSLQKFIFSKTNS---------SSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG  252 (363)
Q Consensus       182 ~~sL~~~l~~~~~~---------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg  252 (363)
                      +|+|.++++.....         .....+++..+..|+.||+.||+|||+   .+|+||||||+|||+++++.+||+|||
T Consensus       127 ~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~Ki~DFG  203 (329)
T 4aoj_A          127 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFG  203 (329)
T ss_dssp             TCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC
T ss_pred             CCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcEEEcccc
Confidence            99999999764321         123569999999999999999999999   999999999999999999999999999


Q ss_pred             cceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhh
Q 039471          253 LAKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRL  323 (363)
Q Consensus       253 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (363)
                      +|+...............||+.|+|||++        +|||||||++|||+| |+.||.......        +...+..
T Consensus       204 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~--------~~~~i~~  275 (329)
T 4aoj_A          204 MSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE--------AIDCITQ  275 (329)
T ss_dssp             ----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH--------HHHHHHH
T ss_pred             cceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH--------HHHHHHc
Confidence            99977654433333456799999999988        899999999999998 899997643321        3333433


Q ss_pred             ccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          324 GQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +...      +.+..+++++.+++.+||+.||++||||+|
T Consensus       276 g~~~------~~p~~~~~~~~~li~~cl~~dP~~RPs~~e  309 (329)
T 4aoj_A          276 GREL------ERPRACPPEVYAIMRGCWQREPQQRHSIKD  309 (329)
T ss_dssp             TCCC------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHH
T ss_pred             CCCC------CCcccccHHHHHHHHHHcCcChhHCcCHHH
Confidence            3322      233456778999999999999999999864


No 5  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=6.3e-52  Score=371.50  Aligned_cols=229  Identities=24%  Similarity=0.277  Sum_probs=188.7

Q ss_pred             cccccccCCcceeecc--CCeeEEEEccc----CCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEH----LKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      .+|.|++|.++.+...  ++.||||++..    .....+.+.+|++++++++|||||++++++.+++..|+||||++||+
T Consensus        39 ~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~  118 (311)
T 4aw0_A           39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE  118 (311)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEE
T ss_pred             EEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCC
Confidence            3566666666655443  44599999963    23455789999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++...      ..+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+.+.......
T Consensus       119 L~~~i~~~------~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~  189 (311)
T 4aw0_A          119 LLKYIRKI------GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA  189 (311)
T ss_dssp             HHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCC
T ss_pred             HHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcc
Confidence            99999543      569999999999999999999999   999999999999999999999999999999886554333


Q ss_pred             ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          265 SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                      ......||+.|+|||++        +|+||+||++|||++|+.||.......        +..++..+..       ..+
T Consensus       190 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--------~~~~i~~~~~-------~~p  254 (311)
T 4aw0_A          190 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL--------IFAKIIKLEY-------DFP  254 (311)
T ss_dssp             CBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHTCC-------CCC
T ss_pred             cccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHcCCC-------CCC
Confidence            34566799999999999        899999999999999999997654321        3333332221       123


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+++++.+|+.+||+.||++|||++|
T Consensus       255 ~~~s~~~~dli~~lL~~dp~~R~t~~e  281 (311)
T 4aw0_A          255 EKFFPKARDLVEKLLVLDATKRLGCEE  281 (311)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSTTSGG
T ss_pred             cccCHHHHHHHHHHccCCHhHCcChHH
Confidence            345678999999999999999999864


No 6  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=1.8e-51  Score=373.90  Aligned_cols=232  Identities=22%  Similarity=0.306  Sum_probs=188.2

Q ss_pred             CcccccccccCCcceeecc--CCeeEEEEcccC-CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          108 PFQSLISFNLTNSKFFFLH--SNEIAVKMLEHL-KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      .+.++|.|++|.++.+...  ++.||||++... ....+.+.+|+.++++++|||||++++++.+++..|||||||+||+
T Consensus        78 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~  157 (346)
T 4fih_A           78 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA  157 (346)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEE
T ss_pred             EeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence            3445666666666665544  344999999643 3445678999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++..       ..+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+........ 
T Consensus       158 L~~~l~~-------~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~-  226 (346)
T 4fih_A          158 LTDIVTH-------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-  226 (346)
T ss_dssp             HHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-
T ss_pred             HHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc-
Confidence            9999843       459999999999999999999999   99999999999999999999999999999987654332 


Q ss_pred             ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          265 SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                       .....||+.|+|||++        +|||||||++|||++|+.||.......        +...+....    .......
T Consensus       227 -~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--------~~~~i~~~~----~~~~~~~  293 (346)
T 4fih_A          227 -RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--------AMKMIRDNL----PPRLKNL  293 (346)
T ss_dssp             -BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HHHHHHHSS----CCCCSCG
T ss_pred             -ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--------HHHHHHcCC----CCCCCcc
Confidence             2456799999999998        899999999999999999997643321        222222211    1112234


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+++++.+|+.+||+.||++|||++|
T Consensus       294 ~~~s~~~~dli~~~L~~dP~~R~ta~e  320 (346)
T 4fih_A          294 HKVSPSLKGFLDRLLVRDPAQRATAAE  320 (346)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            566788999999999999999999864


No 7  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=1.2e-51  Score=375.66  Aligned_cols=232  Identities=19%  Similarity=0.282  Sum_probs=183.5

Q ss_pred             cccccccccCCcceeecc--CCeeEEEEcccCCc---ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          109 FQSLISFNLTNSKFFFLH--SNEIAVKMLEHLKG---NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ...+|.|++|.++.+...  ++.||||++.....   ..+.|.+|++++++++|||||++++++.+++..|||||||+||
T Consensus        29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg  108 (350)
T 4b9d_A           29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG  108 (350)
T ss_dssp             EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred             eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence            344566666666665433  44599999975432   2367899999999999999999999999999999999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++....    ...+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+........
T Consensus       109 ~L~~~i~~~~----~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~  181 (350)
T 4b9d_A          109 DLFKRINAQK----GVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL  181 (350)
T ss_dssp             BHHHHHHHTT----TCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred             cHHHHHHHcC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence            9999996543    2568999999999999999999999   99999999999999999999999999999877543221


Q ss_pred             cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          264 VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                        .....||+.|+|||++        +|||||||++|||++|+.||.......        +..++..+..      +..
T Consensus       182 --~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~--------~~~~i~~~~~------~~~  245 (350)
T 4b9d_A          182 --ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN--------LVLKIISGSF------PPV  245 (350)
T ss_dssp             --HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--------HHHHHHHTCC------CCC
T ss_pred             --ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--------HHHHHHcCCC------CCC
Confidence              2345699999999998        899999999999999999997654321        2233332221      122


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +..+++++.+|+.+||+.||++|||++|
T Consensus       246 ~~~~s~~~~~li~~~L~~dP~~R~s~~e  273 (350)
T 4b9d_A          246 SLHYSYDLRSLVSQLFKRNPRDRPSVNS  273 (350)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CccCCHHHHHHHHHHccCChhHCcCHHH
Confidence            3456778999999999999999999764


No 8  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=5.1e-51  Score=363.74  Aligned_cols=228  Identities=25%  Similarity=0.338  Sum_probs=180.2

Q ss_pred             cccccccCCcceeeccC--CeeEEEEcccCC---cChhHHHHHHHHHhccCCCceeeeeeeeee----CCceeEEEeccC
Q 039471          111 SLISFNLTNSKFFFLHS--NEIAVKMLEHLK---GNGQEFINEVATIGRIHHFHIVRLLGFCSE----GNRRTLIYEFMP  181 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~~--~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~  181 (363)
                      .+|.|++|.++......  ..||||++....   ...++|.+|++++++++|||||++++++.+    +...+||||||+
T Consensus        33 ~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~  112 (290)
T 3fpq_A           33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMT  112 (290)
T ss_dssp             EEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred             EEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCC
Confidence            36777777777665443  349999986433   233679999999999999999999999865    346899999999


Q ss_pred             CCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--ceecCCCCCceEEcC-CCCeeEeccccceecc
Q 039471          182 NGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQR--ILHFDIKPHNILLDH-NFQPKISDFGLAKLCS  258 (363)
Q Consensus       182 ~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~dikp~Nill~~-~~~~kl~Dfg~a~~~~  258 (363)
                      ||+|.+++...      ..+++..+..++.||+.||+|||+   ++  |+||||||+|||++. ++.+||+|||+|+...
T Consensus       113 gg~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~  183 (290)
T 3fpq_A          113 SGTLKTYLKRF------KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             SCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             CCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence            99999999543      569999999999999999999999   77  999999999999984 7899999999998654


Q ss_pred             CCccccccccccccccccCCccc-------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcccccccc
Q 039471          259 KDISIVSRTAARGTSGYIAPELF-------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDF  331 (363)
Q Consensus       259 ~~~~~~~~~~~~gt~~y~aPE~~-------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (363)
                      ...    .....||+.|+|||++       +|||||||++|||+||+.||.......       .+...+..+...    
T Consensus       184 ~~~----~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~-------~~~~~i~~~~~~----  248 (290)
T 3fpq_A          184 ASF----AKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAA-------QIYRRVTSGVKP----  248 (290)
T ss_dssp             TTS----BEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-------HHHHHHTTTCCC----
T ss_pred             CCc----cCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH-------HHHHHHHcCCCC----
Confidence            332    2446799999999998       899999999999999999996543221       133333322211    


Q ss_pred             CCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          332 EEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       332 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       ...+...++++.+++.+||+.||++|||++|
T Consensus       249 -~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e  279 (290)
T 3fpq_A          249 -ASFDKVAIPEVKEIIEGCIRQNKDERYSIKD  279 (290)
T ss_dssp             -GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             -CCCCccCCHHHHHHHHHHccCChhHCcCHHH
Confidence             1122234567999999999999999999864


No 9  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=7.4e-50  Score=371.99  Aligned_cols=232  Identities=22%  Similarity=0.306  Sum_probs=186.4

Q ss_pred             CcccccccccCCcceeecc--CCeeEEEEcccC-CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          108 PFQSLISFNLTNSKFFFLH--SNEIAVKMLEHL-KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      .+.++|.|++|.++.+...  ++.||||++... ....+.+.+|+.+|++++|||||++++++.+++.+|||||||+||+
T Consensus       155 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~  234 (423)
T 4fie_A          155 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA  234 (423)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred             eeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCc
Confidence            3444555555555554443  344999999743 3345678999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++..       ..+++..+..++.||+.||+|||+   ++|+||||||+|||++.+|.+||+|||+|+.+...... 
T Consensus       235 L~~~i~~-------~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~-  303 (423)
T 4fie_A          235 LTDIVTH-------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-  303 (423)
T ss_dssp             HHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC-
T ss_pred             HHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc-
Confidence            9999842       459999999999999999999999   99999999999999999999999999999987654332 


Q ss_pred             ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          265 SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                       .....||+.|||||++        +|||||||++|||++|+.||.......        +...+.....    ......
T Consensus       304 -~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--------~~~~i~~~~~----~~~~~~  370 (423)
T 4fie_A          304 -RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--------AMKMIRDNLP----PRLKNL  370 (423)
T ss_dssp             -BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HHHHHHHSCC----CCCSCT
T ss_pred             -ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--------HHHHHHcCCC----CCCccc
Confidence             2456799999999998        899999999999999999997643321        2222222211    111233


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+++++.+|+.+||+.||++|||++|
T Consensus       371 ~~~s~~~~dli~~~L~~dP~~R~ta~e  397 (423)
T 4fie_A          371 HKVSPSLKGFLDRLLVRDPAQRATAAE  397 (423)
T ss_dssp             TSSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            456778999999999999999999864


No 10 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2e-50  Score=356.87  Aligned_cols=226  Identities=22%  Similarity=0.353  Sum_probs=172.7

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccC----CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHL----KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ..++.|++|.+..+...  ++.||||++...    ....+.+.+|++++++++|||||++++++.+++..++||||+ +|
T Consensus        19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g   97 (275)
T 3hyh_A           19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN   97 (275)
T ss_dssp             EEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CE
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CC
Confidence            44567777777666543  445999999643    233467899999999999999999999999999999999999 67


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++..      ...+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+........
T Consensus        98 ~L~~~l~~------~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~  168 (275)
T 3hyh_A           98 ELFDYIVQ------RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL  168 (275)
T ss_dssp             EHHHHHHH------SCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred             CHHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCCcc
Confidence            99999953      2569999999999999999999999   99999999999999999999999999999876554322


Q ss_pred             cccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCC
Q 039471          264 VSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEED  334 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                         ....||+.|+|||++         +||||+||++|||++|+.||......        .+.+.+..+..       .
T Consensus       169 ---~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~--------~~~~~i~~~~~-------~  230 (275)
T 3hyh_A          169 ---KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--------VLFKNISNGVY-------T  230 (275)
T ss_dssp             ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCC-------C
T ss_pred             ---CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCC-------C
Confidence               446799999999998         79999999999999999999764321        12333332221       1


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .+..+++++.+++.+||+.||++|||++|
T Consensus       231 ~p~~~s~~~~~li~~~L~~dP~~R~s~~e  259 (275)
T 3hyh_A          231 LPKFLSPGAAGLIKRMLIVNPLNRISIHE  259 (275)
T ss_dssp             CCTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            23345678999999999999999999864


No 11 
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=6.2e-50  Score=362.74  Aligned_cols=229  Identities=21%  Similarity=0.165  Sum_probs=180.3

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQK  187 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~  187 (363)
                      .++|.+++|.++.+...  ++.||||+++....    +.+|+.++++++|||||++++++.+++..||||||++||+|.+
T Consensus        64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~  139 (336)
T 4g3f_A           64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ  139 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHH
T ss_pred             cEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHH
Confidence            45677777777666544  44599999974332    2479999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCC-CeeEeccccceeccCCccc---
Q 039471          188 FIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISI---  263 (363)
Q Consensus       188 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~---  263 (363)
                      ++...      ..+++..+..++.||+.||+|||+   ++|+||||||+|||++.++ .+||+|||+|+....+...   
T Consensus       140 ~l~~~------~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~  210 (336)
T 4g3f_A          140 LIKQM------GCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL  210 (336)
T ss_dssp             HHHHH------SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---------
T ss_pred             HHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccce
Confidence            99543      569999999999999999999999   9999999999999999987 5999999999987654321   


Q ss_pred             cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          264 VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                      .......||+.|+|||++        +|||||||++|||++|+.||........        ..++..+....    ...
T Consensus       211 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--------~~~i~~~~~~~----~~~  278 (336)
T 4g3f_A          211 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL--------CLKIASEPPPI----REI  278 (336)
T ss_dssp             ---CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC--------HHHHHHSCCGG----GGS
T ss_pred             ecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH--------HHHHHcCCCCc----hhc
Confidence            122345699999999998        8999999999999999999976543221        11222111111    123


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +..+++.+.+++.+||+.||++|||++|
T Consensus       279 ~~~~s~~~~~li~~~L~~dP~~R~sa~e  306 (336)
T 4g3f_A          279 PPSCAPLTAQAIQEGLRKEPVHRASAME  306 (336)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CccCCHHHHHHHHHHccCCHhHCcCHHH
Confidence            3456788999999999999999999754


No 12 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1.2e-49  Score=359.13  Aligned_cols=246  Identities=20%  Similarity=0.198  Sum_probs=181.8

Q ss_pred             ccccccccCCcceeeccCCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCC----ceeEEEeccCCCCH
Q 039471          110 QSLISFNLTNSKFFFLHSNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGN----RRTLIYEFMPNGSL  185 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~~sL  185 (363)
                      ..+|.|++|.++.....++.||||+++........+..|+..+.+++|||||+++|++.+++    ..+||||||++|+|
T Consensus         9 ~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL   88 (303)
T 3hmm_A            9 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL   88 (303)
T ss_dssp             EEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBH
T ss_pred             EEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcH
Confidence            45788899998888888888999999754333233445666677889999999999997654    57999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-----CCCceecCCCCCceEEcCCCCeeEeccccceeccCC
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGC-----NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD  260 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~  260 (363)
                      .++++.       ..++++.+.+++.|++.||+|||+.+     ..+|+||||||+|||++.++.+||+|||+|+.....
T Consensus        89 ~~~l~~-------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~  161 (303)
T 3hmm_A           89 FDYLNR-------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA  161 (303)
T ss_dssp             HHHHHH-------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred             HHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCC
Confidence            999953       45899999999999999999999821     139999999999999999999999999999987654


Q ss_pred             cccc--ccccccccccccCCccc--------------cCceehhHHHHHHhcCCCCCCcchhcccc-------cchHHHH
Q 039471          261 ISIV--SRTAARGTSGYIAPELF--------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQ-------IYFPEWI  317 (363)
Q Consensus       261 ~~~~--~~~~~~gt~~y~aPE~~--------------~Di~slG~il~el~~g~~~~~~~~~~~~~-------~~~~~~~  317 (363)
                      ....  ......||+.|+|||++              +|||||||++|||+||++|+.........       ....+.+
T Consensus       162 ~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~  241 (303)
T 3hmm_A          162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM  241 (303)
T ss_dssp             TTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHH
T ss_pred             CCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHH
Confidence            3321  12345699999999975              69999999999999999877543322110       0011112


Q ss_pred             HHHhhhccccccccCCC-CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          318 YNRMRLGQELCLDFEED-GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       318 ~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...+. .+...+..... ...+.++.+.+++.+||+.||++||||+|
T Consensus       242 ~~~~~-~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e  287 (303)
T 3hmm_A          242 RKVVC-EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR  287 (303)
T ss_dssp             HHHHT-TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHH
T ss_pred             HHHHh-cccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHH
Confidence            22211 11111111111 23456788999999999999999999864


No 13 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=7.1e-50  Score=358.12  Aligned_cols=226  Identities=20%  Similarity=0.211  Sum_probs=173.8

Q ss_pred             cccccccCCcceeec-----cCCeeEEEEcccCC---cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCC
Q 039471          111 SLISFNLTNSKFFFL-----HSNEIAVKMLEHLK---GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~-----~~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      .+|.|++|.++.+..     .++.||||+++...   ....++.+|++++++++|||||++++++.+++..++||||++|
T Consensus        31 ~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~g  110 (304)
T 3ubd_A           31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRG  110 (304)
T ss_dssp             EEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTT
T ss_pred             EEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCC
Confidence            344555554444322     12349999996432   2335788999999999999999999999999999999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      |+|.+++...      ..+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+.......
T Consensus       111 g~L~~~l~~~------~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~  181 (304)
T 3ubd_A          111 GDLFTRLSKE------VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK  181 (304)
T ss_dssp             CEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----C
T ss_pred             CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCc
Confidence            9999999543      569999999999999999999999   9999999999999999999999999999987544322


Q ss_pred             ccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCC
Q 039471          263 IVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEED  334 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                      .  .....||+.|+|||++        +|+||+||++|||++|+.||.......        +...+..+..       .
T Consensus       182 ~--~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~--------~~~~i~~~~~-------~  244 (304)
T 3ubd_A          182 K--AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE--------TMTMILKAKL-------G  244 (304)
T ss_dssp             C--CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCC-------C
T ss_pred             c--ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH--------HHHHHHcCCC-------C
Confidence            1  2456799999999998        899999999999999999997654322        2233322211       2


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSMP  362 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~  362 (363)
                      .+..+++++.+++.+||+.||++|||+.
T Consensus       245 ~p~~~s~~~~~li~~~L~~dP~~R~ta~  272 (304)
T 3ubd_A          245 MPQFLSPEAQSLLRMLFKRNPANRLGAG  272 (304)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSTTCS
T ss_pred             CCCcCCHHHHHHHHHHcccCHHHCCCCC
Confidence            2344677899999999999999999963


No 14 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=2.2e-49  Score=363.08  Aligned_cols=237  Identities=26%  Similarity=0.369  Sum_probs=185.6

Q ss_pred             cccccccCCcceeeccC-------CeeEEEEcccCCc--ChhHHHHHHHHHhccCC-CceeeeeeeeeeC-CceeEEEec
Q 039471          111 SLISFNLTNSKFFFLHS-------NEIAVKMLEHLKG--NGQEFINEVATIGRIHH-FHIVRLLGFCSEG-NRRTLIYEF  179 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~~-------~~vAvK~~~~~~~--~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~-~~~~lv~e~  179 (363)
                      .+|.++||.++.....+       +.||||++.....  ..++|.+|++++.+++| +|||+++|+|.+. +..+|||||
T Consensus        71 ~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey  150 (353)
T 4ase_A           71 PLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF  150 (353)
T ss_dssp             EEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEEC
T ss_pred             EEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEc
Confidence            35556666555543322       2499999975432  23579999999999965 8999999999764 578999999


Q ss_pred             cCCCCHHHHhhhcCCC----------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEe
Q 039471          180 MPNGSLQKFIFSKTNS----------SSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKIS  249 (363)
Q Consensus       180 ~~~~sL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~  249 (363)
                      |++|+|.++++.....          .....+++..+..++.||++||+|||+   ++|+||||||+|||+++++.+||+
T Consensus       151 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~vKi~  227 (353)
T 4ase_A          151 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKIC  227 (353)
T ss_dssp             CTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             CCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCccceeeCCCCCEEEC
Confidence            9999999999764321          123568999999999999999999999   999999999999999999999999


Q ss_pred             ccccceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHH
Q 039471          250 DFGLAKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNR  320 (363)
Q Consensus       250 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~  320 (363)
                      |||+|+....+..........||+.|+|||++        +|||||||++|||+| |+.||.......       .+...
T Consensus       228 DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~-------~~~~~  300 (353)
T 4ase_A          228 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-------EFCRR  300 (353)
T ss_dssp             CCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-------HHHHH
T ss_pred             cchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-------HHHHH
Confidence            99999987665544444566799999999998        899999999999998 899987543221       13333


Q ss_pred             hhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          321 MRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +..+...      ..+..+++++.+++.+||+.||++||||+|
T Consensus       301 i~~g~~~------~~p~~~~~~~~~li~~c~~~dP~~RPt~~e  337 (353)
T 4ase_A          301 LKEGTRM------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSE  337 (353)
T ss_dssp             HHHTCCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHcCCCC------CCCccCCHHHHHHHHHHcCcChhHCcCHHH
Confidence            4333322      233445678999999999999999999864


No 15 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=3.8e-47  Score=341.46  Aligned_cols=232  Identities=20%  Similarity=0.216  Sum_probs=166.4

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCc--ChhHHHHHHHHHhccCCCceeeeeeeeeeCC------------ce
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKG--NGQEFINEVATIGRIHHFHIVRLLGFCSEGN------------RR  173 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------------~~  173 (363)
                      ..+|.|++|.++.+...  ++.||||+++....  ..+.+.+|+.++++++|||||++++++.+.+            ..
T Consensus        11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l   90 (299)
T 4g31_A           11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYL   90 (299)
T ss_dssp             EEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEE
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEE
Confidence            44566667666665433  44599999864332  2367899999999999999999999986544            36


Q ss_pred             eEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEecccc
Q 039471          174 TLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL  253 (363)
Q Consensus       174 ~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~  253 (363)
                      |+||||+++|+|.+++.....   ....++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+
T Consensus        91 ~ivmE~~~gg~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~DFGl  164 (299)
T 4g31_A           91 YIQMQLCRKENLKDWMNGRCT---IEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGL  164 (299)
T ss_dssp             EEEEECCCSCCHHHHHHTCCS---GGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred             EEEEecCCCCcHHHHHHhcCC---CChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEccCcc
Confidence            899999999999999964432   1345677889999999999999999   9999999999999999999999999999


Q ss_pred             ceeccCCcccc----------ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHH
Q 039471          254 AKLCSKDISIV----------SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPE  315 (363)
Q Consensus       254 a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~  315 (363)
                      |+....+....          ......||+.|+|||++        +|||||||++|||++   ||....+...      
T Consensus       165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~------  235 (299)
T 4g31_A          165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR------  235 (299)
T ss_dssp             C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH------
T ss_pred             ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH------
Confidence            99876543211          11335699999999998        799999999999996   6654322110      


Q ss_pred             HHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          316 WIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       ....+....      .+......++.+.+++.+||+.||++|||++|
T Consensus       236 -~~~~~~~~~------~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~e  276 (299)
T 4g31_A          236 -TLTDVRNLK------FPPLFTQKYPCEYVMVQDMLSPSPMERPEAIN  276 (299)
T ss_dssp             -HHHHHHTTC------CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             -HHHHHhcCC------CCCCCcccCHHHHHHHHHHcCCChhHCcCHHH
Confidence             111111111      01123345567789999999999999999753


No 16 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=8.3e-46  Score=345.04  Aligned_cols=244  Identities=19%  Similarity=0.247  Sum_probs=177.0

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeee------CCceeEEEe
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSE------GNRRTLIYE  178 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~~lv~e  178 (363)
                      ..+|.|++|.++.+...  ++.||||+++.....   .+.+.+|+++|++++|||||++++++..      .+..|||||
T Consensus        60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE  139 (398)
T 4b99_A           60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLD  139 (398)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEE
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEe
Confidence            44566666665555433  445999999754332   3578899999999999999999998753      367899999


Q ss_pred             ccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceecc
Q 039471          179 FMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS  258 (363)
Q Consensus       179 ~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~  258 (363)
                      ||+ |+|.+++.      ....+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+.+.
T Consensus       140 ~~~-g~L~~~i~------~~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~  209 (398)
T 4b99_A          140 LME-SDLHQIIH------SSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLC  209 (398)
T ss_dssp             CCS-EEHHHHHT------SSSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred             CCC-CCHHHHHH------hcCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence            996 68999993      34679999999999999999999999   999999999999999999999999999998764


Q ss_pred             CCcc--ccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHH--------
Q 039471          259 KDIS--IVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYN--------  319 (363)
Q Consensus       259 ~~~~--~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~--------  319 (363)
                      ....  ........||+.|+|||++         +||||+||++|||++|++||.+.........+......        
T Consensus       210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~  289 (398)
T 4b99_A          210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA  289 (398)
T ss_dssp             ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred             cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence            4321  1122456799999999986         79999999999999999999875443221100000000        


Q ss_pred             ----HhhhccccccccCCCC----cHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          320 ----RMRLGQELCLDFEEDG----DEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       320 ----~~~~~~~~~~~~~~~~----~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                          ................    ....++++.+|+.+||+.||++|||++|
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e  341 (398)
T 4b99_A          290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAA  341 (398)
T ss_dssp             ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHH
Confidence                0000000000000000    1123567899999999999999999864


No 17 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=4.3e-45  Score=336.62  Aligned_cols=183  Identities=18%  Similarity=0.274  Sum_probs=149.5

Q ss_pred             ccccccccCCcceeecc-----CCeeEEEEcccCCcChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLH-----SNEIAVKMLEHLKGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~-----~~~vAvK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ..+|.|++|.++....+     ++.||||++.... ...++.+|+++++++ +|+||+++++++.++++.++||||+++|
T Consensus        27 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~  105 (361)
T 4f9c_A           27 DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHE  105 (361)
T ss_dssp             EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCC
T ss_pred             EEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcc
Confidence            34455555555444321     2349999886443 456788999999988 6999999999999999999999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCC-CCeeEeccccceeccCCcc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHN-FQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~-~~~kl~Dfg~a~~~~~~~~  262 (363)
                      +|.+++         ..+++..++.++.||+.||+|||+   ++|+||||||+|||++.+ +.+||+|||+|+.......
T Consensus       106 ~L~~~~---------~~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~  173 (361)
T 4f9c_A          106 SFLDIL---------NSLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI  173 (361)
T ss_dssp             CHHHHH---------TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred             cHHHHH---------cCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence            999999         458999999999999999999999   999999999999999876 7999999999987543221


Q ss_pred             c--------------------------cccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcch
Q 039471          263 I--------------------------VSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAV  305 (363)
Q Consensus       263 ~--------------------------~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~  305 (363)
                      .                          .......||+.|+|||++         +|+||+||++|||++|+.||....
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~  251 (361)
T 4f9c_A          174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS  251 (361)
T ss_dssp             GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence            0                          011234699999999987         699999999999999999996543


No 18 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=4e-44  Score=348.19  Aligned_cols=228  Identities=22%  Similarity=0.215  Sum_probs=179.1

Q ss_pred             cccccccccCCcceeecc--CCeeEEEEcccC----CcChhHHHHH---HHHHhccCCCceeeeeeeeeeCCceeEEEec
Q 039471          109 FQSLISFNLTNSKFFFLH--SNEIAVKMLEHL----KGNGQEFINE---VATIGRIHHFHIVRLLGFCSEGNRRTLIYEF  179 (363)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~----~~~~~~~~~E---~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  179 (363)
                      ...+|.|++|.|..+...  ++.||||++...    ......+.+|   +.+++.++|||||+++++|.+.+.+|+||||
T Consensus       194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy  273 (689)
T 3v5w_A          194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL  273 (689)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence            344566666666555443  334999999632    2223333444   5667788999999999999999999999999


Q ss_pred             cCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccC
Q 039471          180 MPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSK  259 (363)
Q Consensus       180 ~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~  259 (363)
                      ++||+|.+++...      ..+++..++.++.||+.||+|||+   ++|+||||||+|||++.+|.+||+|||+|+....
T Consensus       274 ~~GGdL~~~l~~~------~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~  344 (689)
T 3v5w_A          274 MNGGDLHYHLSQH------GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK  344 (689)
T ss_dssp             CCSCBHHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             CCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence            9999999999543      569999999999999999999999   9999999999999999999999999999998765


Q ss_pred             CccccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccc
Q 039471          260 DISIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLD  330 (363)
Q Consensus       260 ~~~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (363)
                      ...    ....||+.|+|||++         +|+||+||++|||++|+.||........     ..+...+...      
T Consensus       345 ~~~----~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~-----~~i~~~i~~~------  409 (689)
T 3v5w_A          345 KKP----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-----HEIDRMTLTM------  409 (689)
T ss_dssp             CCC----CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH-----HHHHHHHHHC------
T ss_pred             CCC----CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-----HHHHHhhcCC------
Confidence            432    446799999999988         7999999999999999999976543221     0122222111      


Q ss_pred             cCCCCcHHHHHHHHHHHHHhccCCCCCCCCC
Q 039471          331 FEEDGDEGIARKLAIVAIWCIQWNPTERPSM  361 (363)
Q Consensus       331 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~  361 (363)
                       ....+..+++++.+|+.+||+.||++|++.
T Consensus       410 -~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~  439 (689)
T 3v5w_A          410 -AVELPDSFSPELRSLLEGLLQRDVNRRLGC  439 (689)
T ss_dssp             -CCCCCTTSCHHHHHHHHHHTCSCGGGCTTC
T ss_pred             -CCCCCccCCHHHHHHHHHHccCCHhHCCCC
Confidence             112344567889999999999999999984


No 19 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=2.4e-44  Score=350.66  Aligned_cols=231  Identities=19%  Similarity=0.284  Sum_probs=183.3

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccCCc-ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHH
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHLKG-NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQK  187 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~  187 (363)
                      .+|.|++|.+..+...  ++.||||++..... ..+.+.+|+.+|++++|||||++++++.+++..++|||||+||+|.+
T Consensus       164 ~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~  243 (573)
T 3uto_A          164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE  243 (573)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHH
T ss_pred             EEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHH
Confidence            3444445444444333  34499999875432 34678899999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCC--CCeeEeccccceeccCCccccc
Q 039471          188 FIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHN--FQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       188 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~--~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      ++..     ....+++..+..++.||+.||+|||+   ++|+||||||+|||++.+  +.+||+|||+|+.+......  
T Consensus       244 ~i~~-----~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~--  313 (573)
T 3uto_A          244 KVAD-----EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV--  313 (573)
T ss_dssp             HHTC-----TTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE--
T ss_pred             HHHH-----hCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCce--
Confidence            9943     23579999999999999999999999   999999999999999854  88999999999988665433  


Q ss_pred             cccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcH
Q 039471          266 RTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDE  337 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (363)
                       ....||+.|+|||++        +||||+||++|||++|+.||.......        ....+....   .........
T Consensus       314 -~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~--------~~~~i~~~~---~~~~~~~~~  381 (573)
T 3uto_A          314 -KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE--------TLRNVKSCD---WNMDDSAFS  381 (573)
T ss_dssp             -EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--------HHHHHHTTC---CCCCSGGGT
T ss_pred             -eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--------HHHHHHhCC---CCCCccccc
Confidence             345699999999998        899999999999999999997654322        222332221   112222334


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          338 GIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       338 ~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .+++++.+|+.+||+.||++|||++|
T Consensus       382 ~~s~~~~dli~~~L~~dp~~R~t~~e  407 (573)
T 3uto_A          382 GISEDGKDFIRKLLLADPNTRMTIHQ  407 (573)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHH
Confidence            56778999999999999999999753


No 20 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=1.8e-42  Score=315.80  Aligned_cols=243  Identities=25%  Similarity=0.279  Sum_probs=186.8

Q ss_pred             ccccccccCCcceeeccCCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCC----ceeEEEeccCCCCH
Q 039471          110 QSLISFNLTNSKFFFLHSNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGN----RRTLIYEFMPNGSL  185 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~~sL  185 (363)
                      ..++.+++|.++.+...++.||||++.........+.+|+.++++++|+||+++++++....    ..++||||+++|+|
T Consensus        30 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L  109 (322)
T 3soc_A           30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSL  109 (322)
T ss_dssp             EEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBH
T ss_pred             heecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCH
Confidence            33566777777777666777999999765555566778999999999999999999997754    46999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC----------CceecCCCCCceEEcCCCCeeEeccccce
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQ----------RILHFDIKPHNILLDHNFQPKISDFGLAK  255 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~----------~i~H~dikp~Nill~~~~~~kl~Dfg~a~  255 (363)
                      .+++..       ..+++..++.++.|++.||+|||+   .          +|+||||||+|||++.++.+||+|||+++
T Consensus       110 ~~~l~~-------~~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~  179 (322)
T 3soc_A          110 SDFLKA-------NVVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL  179 (322)
T ss_dssp             HHHHHH-------CCBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             HHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence            999943       348999999999999999999999   8          99999999999999999999999999998


Q ss_pred             eccCCccccccccccccccccCCccc-------------cCceehhHHHHHHhcCCCCCCcchhcccccc--------hH
Q 039471          256 LCSKDISIVSRTAARGTSGYIAPELF-------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIY--------FP  314 (363)
Q Consensus       256 ~~~~~~~~~~~~~~~gt~~y~aPE~~-------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~--------~~  314 (363)
                      ...............||..|+|||++             +||||||+++|||++|+.||...........        ..
T Consensus       180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~  259 (322)
T 3soc_A          180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL  259 (322)
T ss_dssp             EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred             ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence            87655443333446799999999986             4999999999999999999976543322111        01


Q ss_pred             HHHHHHhhhccccccccCC-CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          315 EWIYNRMRLGQELCLDFEE-DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+........ ....... ......+..+.+++.+||+.||++|||++|
T Consensus       260 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  308 (322)
T 3soc_A          260 EDMQEVVVHKK-KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGC  308 (322)
T ss_dssp             HHHHHHHTTSC-CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             hhhhhhhhccc-CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHH
Confidence            11111111111 1111111 123356677999999999999999999864


No 21 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=9.6e-42  Score=307.51  Aligned_cols=236  Identities=19%  Similarity=0.281  Sum_probs=186.8

Q ss_pred             CCCCCcccccccccCCcceeec--cCCeeEEEEcccC-CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEecc
Q 039471          104 ETACPFQSLISFNLTNSKFFFL--HSNEIAVKMLEHL-KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       104 ~~~c~~~~~~~~~~~~~~~~~~--~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      ..+.....++.+++|.++.+..  .++.||||++... ....+.+.+|+.++++++|+||+++++++..++..++||||+
T Consensus        20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   99 (297)
T 3fxz_A           20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (297)
T ss_dssp             GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECC
Confidence            3344455566666666655542  3445999998643 344577899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCC
Q 039471          181 PNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD  260 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~  260 (363)
                      ++++|.+++..       ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||++......
T Consensus       100 ~~~~L~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  169 (297)
T 3fxz_A          100 AGGSLTDVVTE-------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (297)
T ss_dssp             TTCBHHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             CCCCHHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence            99999999943       358999999999999999999999   99999999999999999999999999999877654


Q ss_pred             ccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccC
Q 039471          261 ISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFE  332 (363)
Q Consensus       261 ~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (363)
                      ...  .....||+.|+|||++        +|+||||+++|||++|+.||........       ...... ...    ..
T Consensus       170 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-------~~~~~~-~~~----~~  235 (297)
T 3fxz_A          170 QSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-------LYLIAT-NGT----PE  235 (297)
T ss_dssp             TCC--BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-------HHHHHH-HCS----CC
T ss_pred             ccc--cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHh-CCC----CC
Confidence            332  2445699999999987        7999999999999999999976433221       111111 111    11


Q ss_pred             CCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          333 EDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       333 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...+..++..+.+++.+||+.||++|||++|
T Consensus       236 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e  266 (297)
T 3fxz_A          236 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKE  266 (297)
T ss_dssp             CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             CCCccccCHHHHHHHHHHccCChhHCcCHHH
Confidence            1234456778999999999999999999864


No 22 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=6.4e-42  Score=312.67  Aligned_cols=225  Identities=23%  Similarity=0.334  Sum_probs=181.6

Q ss_pred             ccccccCCcceeec--cCCeeEEEEcccCCc---ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHH
Q 039471          112 LISFNLTNSKFFFL--HSNEIAVKMLEHLKG---NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       112 ~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~  186 (363)
                      ++.+++|.+..+..  .++.||||++.....   ..+.+.+|++++++++|+||+++++++...+..++||||+++++|.
T Consensus        23 lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~  102 (328)
T 3fe3_A           23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVF  102 (328)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHH
T ss_pred             EeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHH
Confidence            44555555544442  355599999975432   2357889999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccc
Q 039471          187 KFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSR  266 (363)
Q Consensus       187 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~  266 (363)
                      +++...      ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||++.........   
T Consensus       103 ~~l~~~------~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~---  170 (328)
T 3fe3_A          103 DYLVAH------GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL---  170 (328)
T ss_dssp             HHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG---
T ss_pred             HHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc---
Confidence            999543      469999999999999999999999   99999999999999999999999999999876654332   


Q ss_pred             ccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcH
Q 039471          267 TAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDE  337 (363)
Q Consensus       267 ~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (363)
                      ....||+.|+|||++         +|+||+|+++|||++|+.||.......        +...+..+..       ..+.
T Consensus       171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--------~~~~i~~~~~-------~~p~  235 (328)
T 3fe3_A          171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE--------LRERVLRGKY-------RIPF  235 (328)
T ss_dssp             GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCC-------CCCT
T ss_pred             ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCCC-------CCCC
Confidence            455699999999987         799999999999999999997654321        2222222211       1223


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          338 GIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       338 ~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..++.+.+++.+||+.||++|||++|
T Consensus       236 ~~s~~~~~li~~~L~~dP~~R~t~~e  261 (328)
T 3fe3_A          236 YMSTDCENLLKRFLVLNPIKRGTLEQ  261 (328)
T ss_dssp             TSCHHHHHHHHHHCCSSTTTSCCHHH
T ss_pred             CCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            35677899999999999999999864


No 23 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=7.2e-41  Score=305.08  Aligned_cols=250  Identities=31%  Similarity=0.506  Sum_probs=193.4

Q ss_pred             CcccccccccCCcceeecc-CCeeEEEEcccCCc-ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          108 PFQSLISFNLTNSKFFFLH-SNEIAVKMLEHLKG-NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~-~~~vAvK~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ....++.+++|.++.+... +..||||++..... ..+.+.+|+.++++++|+||+++++++.+++..++||||+++++|
T Consensus        43 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  122 (321)
T 2qkw_B           43 HKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL  122 (321)
T ss_dssp             CCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBT
T ss_pred             ccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcH
Confidence            3344566666666555443 45599999875433 346889999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      .+++....  .....+++..+..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++..........
T Consensus       123 ~~~l~~~~--~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  197 (321)
T 2qkw_B          123 KRHLYGSD--LPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL  197 (321)
T ss_dssp             GGGSSSSC--CCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCC
T ss_pred             HHHHhccC--CCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence            99995433  223469999999999999999999999   9999999999999999999999999999987654332222


Q ss_pred             cccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcc---ccccccCCC
Q 039471          266 RTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQ---ELCLDFEED  334 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  334 (363)
                      .....||..|+|||++        +|+||||+++|||++|+.||....... ......|.......+.   .........
T Consensus       198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (321)
T 2qkw_B          198 STVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE-MVNLAEWAVESHNNGQLEQIVDPNLADK  276 (321)
T ss_dssp             BCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSS-CCCHHHHTHHHHTTTCCCSSSSSSCTTC
T ss_pred             ccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHH-HHHHHHHhhhccccccHHHhcChhhccc
Confidence            2445589999999987        899999999999999999997654332 2223333322222111   112223334


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .....+..+.+++.+||+.||++|||++|
T Consensus       277 ~~~~~~~~l~~li~~~l~~dP~~Rps~~e  305 (321)
T 2qkw_B          277 IRPESLRKFGDTAVKCLALSSEDRPSMGD  305 (321)
T ss_dssp             SCHHHHHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             cCHHHHHHHHHHHHHHcCCCcccCcCHHH
Confidence            56788999999999999999999999864


No 24 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=6.7e-42  Score=314.52  Aligned_cols=229  Identities=23%  Similarity=0.362  Sum_probs=176.0

Q ss_pred             ccccccccCCcceeec--cCCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          110 QSLISFNLTNSKFFFL--HSNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ..++.+++|.+..+..  .++.||||++....  ...+.+.+|++++++++|+||+++++++.+.+..++||||+++++|
T Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L   95 (347)
T 3zgw_A           16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGEL   95 (347)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred             EEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCCH
Confidence            3445555555555432  34559999986543  3346789999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      .+++...      ..+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++......... .
T Consensus        96 ~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~-~  165 (347)
T 3zgw_A           96 FDYIISQ------DRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY-H  165 (347)
T ss_dssp             HHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC---------
T ss_pred             HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc-c
Confidence            9999543      459999999999999999999999   99999999999999999999999999998866543221 1


Q ss_pred             cccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          266 RTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                      .....||+.|+|||++         +||||+|+++|||++|..||.......        ....+..+..       ..+
T Consensus       166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~--------~~~~i~~~~~-------~~p  230 (347)
T 3zgw_A          166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA--------LYKKIMRGKY-------DVP  230 (347)
T ss_dssp             ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHTCC-------CCC
T ss_pred             ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHcCCC-------CCC
Confidence            2445689999999987         799999999999999999997643221        2223322211       122


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...++.+.+++.+||+.||++|||++|
T Consensus       231 ~~~s~~~~~li~~~L~~dP~~Rps~~e  257 (347)
T 3zgw_A          231 KWLSPSSILLLQQMLQVDPKKRISMKN  257 (347)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCHHHHHHHHHHcccCHhHCcCHHH
Confidence            335677889999999999999999864


No 25 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=1.7e-41  Score=313.59  Aligned_cols=231  Identities=22%  Similarity=0.282  Sum_probs=182.6

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCc-------ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEecc
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKG-------NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      ..++.+++|.++.+...  +..||+|++.....       ..+.+.+|+.++++++||||+++++++.+....++||||+
T Consensus        18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~   97 (361)
T 2yab_A           18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELV   97 (361)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             eEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcC
Confidence            44556666665555443  44599999974332       2367899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCC----CeeEecccccee
Q 039471          181 PNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF----QPKISDFGLAKL  256 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~----~~kl~Dfg~a~~  256 (363)
                      ++|+|.+++.      ....+++..+..++.||+.||+|||+   .+|+||||||+|||++.++    .+||+|||+++.
T Consensus        98 ~gg~L~~~l~------~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~  168 (361)
T 2yab_A           98 SGGELFDFLA------QKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (361)
T ss_dssp             CSCBHHHHHT------TCSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred             CCCcHHHHHH------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence            9999999993      33579999999999999999999999   9999999999999998776    799999999988


Q ss_pred             ccCCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccc
Q 039471          257 CSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELC  328 (363)
Q Consensus       257 ~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (363)
                      .......   ....||+.|+|||++        +|+||||+++|+|++|..||.......        ....+..+..  
T Consensus       169 ~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~--------~~~~i~~~~~--  235 (361)
T 2yab_A          169 IEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--------TLANITAVSY--  235 (361)
T ss_dssp             CCTTCCC---CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--------HHHHHHTTCC--
T ss_pred             cCCCCcc---ccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhcCC--
Confidence            7654332   445699999999987        799999999999999999997654322        2222221111  


Q ss_pred             cccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          329 LDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       329 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       ..........+..+.+++.+||+.||++|||++|
T Consensus       236 -~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e  269 (361)
T 2yab_A          236 -DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQE  269 (361)
T ss_dssp             -CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             -CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHH
Confidence             1111112234677999999999999999999753


No 26 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=2.4e-41  Score=308.44  Aligned_cols=233  Identities=24%  Similarity=0.317  Sum_probs=181.4

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ..++.+++|.++.+...  ++.||||++....  ...+.+.+|+.++++++|+||+++++++.+++..++||||+++++|
T Consensus        13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L   92 (323)
T 3tki_A           13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL   92 (323)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEG
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcH
Confidence            34555666665555433  4459999986432  2346788999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      .+++.      ....+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..........
T Consensus        93 ~~~l~------~~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~  163 (323)
T 3tki_A           93 FDRIE------PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  163 (323)
T ss_dssp             GGGSB------TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             HHHHh------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence            99983      33569999999999999999999999   9999999999999999999999999999987654433323


Q ss_pred             cccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          266 RTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                      .....||..|+|||++         +|+||||+++|||++|+.||........  .+..+     .....     .....
T Consensus       164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~~~-----~~~~~-----~~~~~  231 (323)
T 3tki_A          164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDW-----KEKKT-----YLNPW  231 (323)
T ss_dssp             BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH--HHHHH-----HTTCT-----TSTTG
T ss_pred             cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHH-----hcccc-----cCCcc
Confidence            3456799999999987         7999999999999999999976543321  11111     11110     11122


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..++..+.+++.+||+.||++|||++|
T Consensus       232 ~~~~~~~~~li~~~L~~dP~~R~t~~e  258 (323)
T 3tki_A          232 KKIDSAPLALLHKILVENPSARITIPD  258 (323)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            345677899999999999999999854


No 27 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=1.6e-40  Score=300.74  Aligned_cols=244  Identities=31%  Similarity=0.456  Sum_probs=192.4

Q ss_pred             ccccccccCCcceeeccCCeeEEEEcccCC-----cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          110 QSLISFNLTNSKFFFLHSNEIAVKMLEHLK-----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ..++.+++|.++.+...++.||||++....     ...+.+.+|+.++++++|+||+++++++.+++..++||||+++++
T Consensus        37 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  116 (307)
T 2nru_A           37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS  116 (307)
T ss_dssp             CEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred             CccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCc
Confidence            456777777777777777779999986432     224678999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++....   ....+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++..........
T Consensus       117 L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  190 (307)
T 2nru_A          117 LLDRLSCLD---GTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV  190 (307)
T ss_dssp             HHHHHHTGG---GCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCE
T ss_pred             HHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcCCCcEEEeecccccccccccccc
Confidence            999996432   22569999999999999999999999   999999999999999999999999999998766543332


Q ss_pred             ccccccccccccCCccc-------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccc----cccccCC
Q 039471          265 SRTAARGTSGYIAPELF-------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQE----LCLDFEE  333 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~-------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~  333 (363)
                      ......||..|+|||++       +|+||||+++|||++|..||..........   .+ ...+.....    .......
T Consensus       191 ~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~  266 (307)
T 2nru_A          191 MTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL---DI-KEEIEDEEKTIEDYIDKKMN  266 (307)
T ss_dssp             ECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT---HH-HHHHHTTSCCHHHHSCSSCS
T ss_pred             cccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH---HH-HHHhhhhhhhhhhhcccccc
Confidence            23445689999999987       899999999999999999997654332211   11 111111110    0111123


Q ss_pred             CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          334 DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       334 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ......+..+.+++.+||+.+|++|||++|
T Consensus       267 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~~  296 (307)
T 2nru_A          267 DADSTSVEAMYSVASQCLHEKKNKRPDIKK  296 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             ccchHHHHHHHHHHHHHcCCCcccCcCHHH
Confidence            356778889999999999999999999853


No 28 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.3e-40  Score=303.89  Aligned_cols=255  Identities=34%  Similarity=0.540  Sum_probs=194.4

Q ss_pred             CCCcccccccccCCcceeecc-CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCC
Q 039471          106 ACPFQSLISFNLTNSKFFFLH-SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       106 ~c~~~~~~~~~~~~~~~~~~~-~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      +.....++.+++|.++.+... ++.||||++....  .....+.+|++++++++|+||+++++++.+....++||||+++
T Consensus        32 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  111 (326)
T 3uim_A           32 FSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMAN  111 (326)
T ss_dssp             SCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTT
T ss_pred             cccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccC
Confidence            334455666666666655443 3449999997543  2334789999999999999999999999999999999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      ++|.+++.....  ....+++..+..++.|++.||+|||+.+..+|+||||||+|||++.++.+||+|||+++.......
T Consensus       112 ~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  189 (326)
T 3uim_A          112 GSVASCLRERPE--SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT  189 (326)
T ss_dssp             CBHHHHHHCCST--TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSS
T ss_pred             CCHHHHHHhccc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccc
Confidence            999999965432  335699999999999999999999991111999999999999999999999999999988754433


Q ss_pred             ccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhc-ccccchHHHHHHHhhhcc---ccccc
Q 039471          263 IVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEI-QSQIYFPEWIYNRMRLGQ---ELCLD  330 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~  330 (363)
                      . ......||..|+|||++        +||||||+++|||++|+.||...... ........|+........   .....
T Consensus       190 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (326)
T 3uim_A          190 H-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVD  268 (326)
T ss_dssp             C-EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTT
T ss_pred             c-ccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChh
Confidence            2 12445589999999988        89999999999999999999754322 223334444433222211   11222


Q ss_pred             cCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          331 FEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       331 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .........++.+.+++.+||+.||++|||++|
T Consensus       269 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  301 (326)
T 3uim_A          269 LQGNYKDEEVEQLIQVALLCTQSSPMERPKMSE  301 (326)
T ss_dssp             CTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHH
T ss_pred             hccccCHHHHHHHHHHHHHHhCcCCccCCCHHH
Confidence            334466788899999999999999999999864


No 29 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=1.8e-41  Score=307.39  Aligned_cols=232  Identities=25%  Similarity=0.426  Sum_probs=174.1

Q ss_pred             cccccccCCcceeeccCCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHH
Q 039471          111 SLISFNLTNSKFFFLHSNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQK  187 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~  187 (363)
                      .++.+++|.++.+...++.||||++......   .+++.+|++++++++|+||+++++++.+....++||||+++++|.+
T Consensus        44 ~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  123 (309)
T 3p86_A           44 KIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR  123 (309)
T ss_dssp             EEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHH
T ss_pred             EeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHH
Confidence            3455666666555556667999999754432   2478899999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--ceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          188 FIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQR--ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       188 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      ++.....   ...+++..++.++.|++.||+|||+   .+  |+||||||+|||++.++.+||+|||+++.......  .
T Consensus       124 ~l~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~--~  195 (309)
T 3p86_A          124 LLHKSGA---REQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL--S  195 (309)
T ss_dssp             HHHSTTH---HHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC-------------
T ss_pred             HHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccc--c
Confidence            9954221   1348999999999999999999999   88  99999999999999999999999999986544322  1


Q ss_pred             cccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcH
Q 039471          266 RTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDE  337 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (363)
                      .....||..|+|||++        +|+||||+++|||++|+.||.......        ....+....     .....+.
T Consensus       196 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--------~~~~~~~~~-----~~~~~~~  262 (309)
T 3p86_A          196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--------VVAAVGFKC-----KRLEIPR  262 (309)
T ss_dssp             ------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--------HHHHHHHSC-----CCCCCCT
T ss_pred             cccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhcC-----CCCCCCc
Confidence            2445689999999987        799999999999999999997653321        111111010     1112334


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          338 GIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       338 ~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .+++.+.+++.+||+.+|++|||++|
T Consensus       263 ~~~~~l~~li~~~l~~dP~~Rps~~~  288 (309)
T 3p86_A          263 NLNPQVAAIIEGCWTNEPWKRPSFAT  288 (309)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHH
Confidence            56678999999999999999999853


No 30 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.5e-41  Score=309.46  Aligned_cols=232  Identities=16%  Similarity=0.186  Sum_probs=183.2

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQK  187 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~  187 (363)
                      ..++.+++|.++.+...  +..||+|.+.......+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+
T Consensus        11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~   90 (321)
T 1tki_A           11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFE   90 (321)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHH
T ss_pred             eEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHH
Confidence            33455555555554433  3449999997665555678899999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcC--CCCeeEeccccceeccCCccccc
Q 039471          188 FIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDH--NFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       188 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      ++...     ...+++..+..++.|++.||+|||+   .+|+||||||+|||++.  ++.+||+|||+++........  
T Consensus        91 ~l~~~-----~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~--  160 (321)
T 1tki_A           91 RINTS-----AFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF--  160 (321)
T ss_dssp             HHTSS-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE--
T ss_pred             HHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc--
Confidence            99432     2469999999999999999999999   99999999999999987  789999999999887654432  


Q ss_pred             cccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcH
Q 039471          266 RTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDE  337 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (363)
                       ....||+.|+|||++        +|+||||+++|||++|..||.......        ....+..+...   .......
T Consensus       161 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~~~~~---~~~~~~~  228 (321)
T 1tki_A          161 -RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ--------IIENIMNAEYT---FDEEAFK  228 (321)
T ss_dssp             -EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHHTCCC---CCHHHHT
T ss_pred             -ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH--------HHHHHHcCCCC---CChhhhc
Confidence             345689999999987        899999999999999999997654321        12222211110   1111112


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          338 GIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       338 ~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+.++.+++.+||+.||++|||++|
T Consensus       229 ~~s~~~~~li~~~L~~dp~~Rpt~~e  254 (321)
T 1tki_A          229 EISIEAMDFVDRLLVKERKSRMTASE  254 (321)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            34678999999999999999999854


No 31 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=7.6e-41  Score=310.75  Aligned_cols=217  Identities=24%  Similarity=0.435  Sum_probs=174.9

Q ss_pred             eEEEEcccCCc--ChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCCCCHHHHhhhcCCC----------C
Q 039471          130 IAVKMLEHLKG--NGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKFIFSKTNS----------S  196 (363)
Q Consensus       130 vAvK~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~----------~  196 (363)
                      ||||+++....  ..+++.+|+.+++++ +|+||+++++++.+.+..++||||+++|+|.+++......          .
T Consensus       116 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~  195 (370)
T 2psq_A          116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV  195 (370)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------
T ss_pred             EEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCcccccccccccc
Confidence            99999975432  235789999999999 8999999999999999999999999999999999764321          1


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccccccccccccc
Q 039471          197 SHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTAARGTSGYI  276 (363)
Q Consensus       197 ~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~  276 (363)
                      ....+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++...............+|+.|+
T Consensus       196 ~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~  272 (370)
T 2psq_A          196 PEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM  272 (370)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGC
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceE
Confidence            23468999999999999999999999   999999999999999999999999999998776544332334455788999


Q ss_pred             CCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHHHHHHHH
Q 039471          277 APELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIARKLAIVA  347 (363)
Q Consensus       277 aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  347 (363)
                      |||++        +|+||||+++|||++ |+.||.......        +...+..+..      ...+..++..+.+++
T Consensus       273 aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--------~~~~~~~~~~------~~~~~~~~~~l~~li  338 (370)
T 2psq_A          273 APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------LFKLLKEGHR------MDKPANCTNELYMMM  338 (370)
T ss_dssp             CHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--------HHHHHHTTCC------CCCCTTSCHHHHHHH
T ss_pred             CHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--------HHHHHhcCCC------CCCCCCCCHHHHHHH
Confidence            99987        899999999999999 999987643221        2222222211      123345567899999


Q ss_pred             HHhccCCCCCCCCCCC
Q 039471          348 IWCIQWNPTERPSMPM  363 (363)
Q Consensus       348 ~~cl~~~p~~RPs~~e  363 (363)
                      .+||+.||++|||++|
T Consensus       339 ~~~l~~dP~~Rpt~~e  354 (370)
T 2psq_A          339 RDCWHAVPSQRPTFKQ  354 (370)
T ss_dssp             HHHTCSSGGGSCCHHH
T ss_pred             HHHcCCChhhCcCHHH
Confidence            9999999999999864


No 32 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=5.1e-41  Score=310.88  Aligned_cols=233  Identities=24%  Similarity=0.286  Sum_probs=173.2

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQK  187 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~  187 (363)
                      ..++.+++|.++.+...  ++.||||++.......+.+.+|+.++++++|+||+++++++.++...++||||+++++|.+
T Consensus        26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~  105 (361)
T 3uc3_A           26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYE  105 (361)
T ss_dssp             EEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred             EEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHH
Confidence            34456666655555443  4449999998766667889999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCC--eeEeccccceeccCCccccc
Q 039471          188 FIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ--PKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       188 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~--~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      ++...      ..+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.  +||+|||+++.......   
T Consensus       106 ~l~~~------~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~---  173 (361)
T 3uc3_A          106 RICNA------GRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---  173 (361)
T ss_dssp             HHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----------
T ss_pred             HHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC---
Confidence            99543      459999999999999999999999   99999999999999987765  99999999975433222   


Q ss_pred             cccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          266 RTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                      .....||+.|+|||++         +|+||||+++|||++|+.||........   +...+ ..+....     ......
T Consensus       174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~---~~~~~-~~~~~~~-----~~~~~~  244 (361)
T 3uc3_A          174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD---YRKTI-QRILSVK-----YSIPDD  244 (361)
T ss_dssp             -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC---HHHHH-HHHHTTC-----CCCCTT
T ss_pred             CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH---HHHHH-HHHhcCC-----CCCCCc
Confidence            1345699999999987         7999999999999999999976544322   11111 1111111     111112


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...++.+.+++.+||+.||++|||++|
T Consensus       245 ~~~s~~~~~li~~~L~~dP~~Rps~~e  271 (361)
T 3uc3_A          245 IRISPECCHLISRIFVADPATRISIPE  271 (361)
T ss_dssp             SCCCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             CCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            234677899999999999999999854


No 33 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=1.6e-40  Score=302.80  Aligned_cols=230  Identities=24%  Similarity=0.341  Sum_probs=184.5

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC-cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK-GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~  186 (363)
                      ..++.+++|.++.+...  ++.||||++.... ...+.+.+|+.++++++|+||+++++++..+...++||||+++++|.
T Consensus        51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~  130 (321)
T 2c30_A           51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT  130 (321)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHH
T ss_pred             EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHH
Confidence            34666667666655543  4559999997543 34567899999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccc
Q 039471          187 KFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSR  266 (363)
Q Consensus       187 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~  266 (363)
                      +++..       ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||++.........  .
T Consensus       131 ~~l~~-------~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~  198 (321)
T 2c30_A          131 DIVSQ-------VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--R  198 (321)
T ss_dssp             HHHTT-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC--B
T ss_pred             HHHHh-------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccc--c
Confidence            99832       458999999999999999999999   99999999999999999999999999999877654322  2


Q ss_pred             ccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHH
Q 039471          267 TAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEG  338 (363)
Q Consensus       267 ~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (363)
                      ....||..|+|||++        +|+||||+++|||++|+.||.......        ....+......    .......
T Consensus       199 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~--------~~~~~~~~~~~----~~~~~~~  266 (321)
T 2c30_A          199 KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--------AMKRLRDSPPP----KLKNSHK  266 (321)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HHHHHHHSSCC----CCTTGGG
T ss_pred             ccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhcCCCC----CcCcccc
Confidence            445699999999988        899999999999999999997643321        12222211111    1112334


Q ss_pred             HHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          339 IARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       339 ~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .++.+.+++.+||+.||++|||++|
T Consensus       267 ~~~~l~~li~~~l~~dp~~Rps~~e  291 (321)
T 2c30_A          267 VSPVLRDFLERMLVRDPQERATAQE  291 (321)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHH
Confidence            5677999999999999999999864


No 34 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=4e-41  Score=298.96  Aligned_cols=231  Identities=21%  Similarity=0.392  Sum_probs=185.5

Q ss_pred             ccccccccCCcceeec-cCCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHHH
Q 039471          110 QSLISFNLTNSKFFFL-HSNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKF  188 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~  188 (363)
                      ..++.+++|.++.+.. .++.||+|++.......+++.+|++++++++|+||+++++++.+++..++||||+++++|.++
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   95 (269)
T 4hcu_A           16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY   95 (269)
T ss_dssp             EEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHH
T ss_pred             heecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHH
Confidence            4456666666665554 344599999987777778999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccccc
Q 039471          189 IFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTA  268 (363)
Q Consensus       189 l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  268 (363)
                      +....     ..+++..+..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++........ ....
T Consensus        96 l~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~  166 (269)
T 4hcu_A           96 LRTQR-----GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTG  166 (269)
T ss_dssp             HHTTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH-STTS
T ss_pred             HHhcC-----cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEeccccccccccccccc-cccC
Confidence            95432     568999999999999999999999   99999999999999999999999999999876543221 2234


Q ss_pred             ccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHH
Q 039471          269 ARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGI  339 (363)
Q Consensus       269 ~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (363)
                      ..+|..|+|||++        +|+||||+++|||++ |+.||.......        ....+..+..      ...+...
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~--------~~~~~~~~~~------~~~~~~~  232 (269)
T 4hcu_A          167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--------VVEDISTGFR------LYKPRLA  232 (269)
T ss_dssp             TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTTCC------CCCCTTS
T ss_pred             cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH--------HHHHHhcCcc------CCCCCcC
Confidence            4577889999988        799999999999999 899987643321        2222222211      1223334


Q ss_pred             HHHHHHHHHHhccCCCCCCCCCCC
Q 039471          340 ARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       340 ~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +..+.+++.+||+.||++|||++|
T Consensus       233 ~~~~~~li~~~l~~~p~~Rps~~~  256 (269)
T 4hcu_A          233 STHVYQIMNHCWRERPEDRPAFSR  256 (269)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CHHHHHHHHHHccCCcccCcCHHH
Confidence            677999999999999999999864


No 35 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=7.3e-41  Score=322.22  Aligned_cols=230  Identities=27%  Similarity=0.391  Sum_probs=186.2

Q ss_pred             ccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHHHh
Q 039471          112 LISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKFI  189 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l  189 (363)
                      ++.+++|.++.+...  +..||||+++......++|.+|+.++++++|+||+++++++.+....++||||+++|+|.+++
T Consensus       228 lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l  307 (495)
T 1opk_A          228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL  307 (495)
T ss_dssp             SGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHH
T ss_pred             ecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHH
Confidence            455566666555444  345999999877767789999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccccccc
Q 039471          190 FSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTAA  269 (363)
Q Consensus       190 ~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  269 (363)
                      .....    ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++........ .....
T Consensus       308 ~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-~~~~~  379 (495)
T 1opk_A          308 RECNR----QEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGA  379 (495)
T ss_dssp             HHSCT----TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE-CCTTC
T ss_pred             HhcCc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCcee-ecCCC
Confidence            65432    568999999999999999999999   99999999999999999999999999999887544322 22344


Q ss_pred             cccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHH
Q 039471          270 RGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIA  340 (363)
Q Consensus       270 ~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (363)
                      .++..|+|||++        +||||||+++|||++ |+.||.......        +...+..+..      ...+..++
T Consensus       380 ~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--------~~~~~~~~~~------~~~~~~~~  445 (495)
T 1opk_A          380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------VYELLEKDYR------MERPEGCP  445 (495)
T ss_dssp             CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--------HHHHHHTTCC------CCCCTTCC
T ss_pred             cCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCC------CCCCCCCC
Confidence            567899999988        899999999999999 888887543221        2222322211      12334566


Q ss_pred             HHHHHHHHHhccCCCCCCCCCCC
Q 039471          341 RKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       341 ~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+.+++.+||+.||++|||++|
T Consensus       446 ~~l~~li~~cl~~dP~~RPs~~e  468 (495)
T 1opk_A          446 EKVYELMRACWQWNPSDRPSFAE  468 (495)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHHcCcChhHCcCHHH
Confidence            78999999999999999999863


No 36 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=7.6e-41  Score=296.96  Aligned_cols=231  Identities=22%  Similarity=0.393  Sum_probs=185.2

Q ss_pred             ccccccccCCcceeeccCC-eeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHHH
Q 039471          110 QSLISFNLTNSKFFFLHSN-EIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKF  188 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~-~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~  188 (363)
                      ..++.+++|.++.+...+. .||+|++.......+++.+|+.++++++|+||+++++++.++...++||||+++++|.++
T Consensus        14 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   93 (268)
T 3sxs_A           14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNY   93 (268)
T ss_dssp             EEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHH
T ss_pred             eeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHH
Confidence            3445566665555544444 499999987777778899999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccccc
Q 039471          189 IFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTA  268 (363)
Q Consensus       189 l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  268 (363)
                      +....     ..+++..++.++.|++.||+|||+   .+++||||||+||+++.++.+||+|||++......... ....
T Consensus        94 l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-~~~~  164 (268)
T 3sxs_A           94 LRSHG-----KGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV-SSVG  164 (268)
T ss_dssp             HHHHG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE-ECCS
T ss_pred             HHHcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhhh-cccC
Confidence            96432     458999999999999999999999   99999999999999999999999999999877654432 2234


Q ss_pred             ccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHH
Q 039471          269 ARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGI  339 (363)
Q Consensus       269 ~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (363)
                      ..+|..|+|||++        +|+||||+++|||++ |+.||.......        ....+..+..      ...+...
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~------~~~~~~~  230 (268)
T 3sxs_A          165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE--------VVLKVSQGHR------LYRPHLA  230 (268)
T ss_dssp             CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH--------HHHHHHTTCC------CCCCTTS
T ss_pred             CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH--------HHHHHHcCCC------CCCCCcC
Confidence            4567789999987        899999999999998 999987544321        1122221211      1122334


Q ss_pred             HHHHHHHHHHhccCCCCCCCCCCC
Q 039471          340 ARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       340 ~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ++.+.+++.+||+.||++|||++|
T Consensus       231 ~~~l~~li~~~l~~~p~~Rps~~~  254 (268)
T 3sxs_A          231 SDTIYQIMYSCWHELPEKRPTFQQ  254 (268)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred             hHHHHHHHHHHcCCChhhCcCHHH
Confidence            567999999999999999999864


No 37 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=2.6e-41  Score=314.73  Aligned_cols=232  Identities=22%  Similarity=0.305  Sum_probs=181.3

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCc--ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKG--NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ..++.+++|.++.+...  +..||||+++....  ..++|.+|++++++++|+||+++++++.++...++||||+++|+|
T Consensus       120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L  199 (377)
T 3cbl_A          120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF  199 (377)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred             eEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCH
Confidence            33555566655555543  44599999874422  235788999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      .+++....     ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..........
T Consensus       200 ~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~  271 (377)
T 3cbl_A          200 LTFLRTEG-----ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS  271 (377)
T ss_dssp             HHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred             HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence            99996432     458999999999999999999999   9999999999999999999999999999987554332222


Q ss_pred             cccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          266 RTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                      .....++..|+|||++        +||||||+++|||++ |..||.......        +...+..+...      ..+
T Consensus       272 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--------~~~~~~~~~~~------~~~  337 (377)
T 3cbl_A          272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--------TREFVEKGGRL------PCP  337 (377)
T ss_dssp             SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--------HHHHHHTTCCC------CCC
T ss_pred             CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCCC------CCC
Confidence            2223457789999987        899999999999998 888887643221        22223222211      223


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..++..+.+++.+||+.||++|||++|
T Consensus       338 ~~~~~~l~~li~~cl~~dP~~Rps~~~  364 (377)
T 3cbl_A          338 ELCPDAVFRLMEQCWAYEPGQRPSFST  364 (377)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence            345677999999999999999999863


No 38 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=1.3e-40  Score=304.95  Aligned_cols=224  Identities=20%  Similarity=0.245  Sum_probs=179.3

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEccc----CCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEH----LKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ..++.+++|.+..+...  ++.||||+++.    .....+.+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus        11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg   90 (337)
T 1o6l_A           11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   90 (337)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence            33455555555544433  44599999964    2345568899999999999999999999999999999999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|..++...      ..+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++....... 
T Consensus        91 ~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~-  160 (337)
T 1o6l_A           91 ELFFHLSRE------RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-  160 (337)
T ss_dssp             BHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC-
T ss_pred             cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC-
Confidence            999999533      568999999999999999999999   9999999999999999999999999999986433222 


Q ss_pred             cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          264 VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                       ......||+.|+|||++        +|+||||+++|||++|+.||.......        +...+..+.       ...
T Consensus       161 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--------~~~~i~~~~-------~~~  224 (337)
T 1o6l_A          161 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--------LFELILMEE-------IRF  224 (337)
T ss_dssp             -CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCC-------CCC
T ss_pred             -cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH--------HHHHHHcCC-------CCC
Confidence             12445689999999998        799999999999999999997643221        222222211       112


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERP  359 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RP  359 (363)
                      +..+++.+.+++.+||+.||++||
T Consensus       225 p~~~s~~~~~li~~lL~~dP~~R~  248 (337)
T 1o6l_A          225 PRTLSPEAKSLLAGLLKKDPKQRL  248 (337)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTST
T ss_pred             CCCCCHHHHHHHHHHhhcCHHHhc
Confidence            334567899999999999999999


No 39 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=6.8e-41  Score=305.91  Aligned_cols=231  Identities=21%  Similarity=0.274  Sum_probs=180.6

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCc-------ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEecc
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKG-------NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      ..++.+++|.++.+...  +..||+|++.....       ..+.+.+|+.++++++||||+++++++.+....++||||+
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   96 (326)
T 2y0a_A           17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELV   96 (326)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             eEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcC
Confidence            33455555555554443  44599999864322       3467899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCC----CeeEecccccee
Q 039471          181 PNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF----QPKISDFGLAKL  256 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~----~~kl~Dfg~a~~  256 (363)
                      ++++|.+++.      ....+++..+..++.|++.||.|||+   .+|+||||||+|||++.++    .+||+|||+++.
T Consensus        97 ~~~~L~~~l~------~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  167 (326)
T 2y0a_A           97 AGGELFDFLA------EKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  167 (326)
T ss_dssp             CSCBHHHHHT------TSSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             CCCCHHHHHH------hcCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence            9999999993      23569999999999999999999999   9999999999999999877    799999999988


Q ss_pred             ccCCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccc
Q 039471          257 CSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELC  328 (363)
Q Consensus       257 ~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (363)
                      .......   ....||+.|+|||++        +|+||||+++|||++|..||.......        ....+.....  
T Consensus       168 ~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~~~~~~~--  234 (326)
T 2y0a_A          168 IDFGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--------TLANVSAVNY--  234 (326)
T ss_dssp             CCTTSCC---CCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--------HHHHHHHTCC--
T ss_pred             CCCCCcc---ccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--------HHHHHHhcCC--
Confidence            7644322   345689999999987        799999999999999999997643321        1111111110  


Q ss_pred             cccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          329 LDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       329 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       ..........+..+.+++.+||+.||++|||++|
T Consensus       235 -~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  268 (326)
T 2y0a_A          235 -EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQD  268 (326)
T ss_dssp             -CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             -CcCccccccCCHHHHHHHHHHccCChhhCCCHHH
Confidence             0111111234567899999999999999999854


No 40 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=5.6e-40  Score=298.90  Aligned_cols=240  Identities=20%  Similarity=0.247  Sum_probs=185.3

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCC--ceeEEEeccCCCC
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGN--RRTLIYEFMPNGS  184 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~s  184 (363)
                      .++.+++|.++.+...  ++.||||++....  ...+.+.+|++++++++|+||+++++++....  ..++||||+++++
T Consensus        16 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~   95 (319)
T 4euu_A           16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGS   95 (319)
T ss_dssp             EEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCB
T ss_pred             EecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCC
Confidence            3455666666555444  4459999997432  34577889999999999999999999987655  7899999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEE----cCCCCeeEeccccceeccCC
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL----DHNFQPKISDFGLAKLCSKD  260 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill----~~~~~~kl~Dfg~a~~~~~~  260 (363)
                      |.+++.....   ...+++..++.++.|++.||+|||+   .+|+||||||+|||+    +.++.+||+|||+++.....
T Consensus        96 L~~~l~~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~  169 (319)
T 4euu_A           96 LYTVLEEPSN---AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD  169 (319)
T ss_dssp             HHHHHHSGGG---TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred             HHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence            9999965432   2349999999999999999999999   999999999999999    77888999999999887655


Q ss_pred             ccccccccccccccccCCccc----------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhc
Q 039471          261 ISIVSRTAARGTSGYIAPELF----------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLG  324 (363)
Q Consensus       261 ~~~~~~~~~~gt~~y~aPE~~----------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (363)
                      ...   ....||..|+|||++                +||||||+++|||++|+.||............   +...+. +
T Consensus       170 ~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~---~~~~~~-~  242 (319)
T 4euu_A          170 EQF---VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV---MYKIIT-G  242 (319)
T ss_dssp             CCB---CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHH---HHHHHH-H
T ss_pred             Cce---eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHH---HHHHhc-C
Confidence            432   345689999999974                69999999999999999999754332222111   111111 1


Q ss_pred             cc----------------c--ccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          325 QE----------------L--CLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       325 ~~----------------~--~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..                .  ...........++..+.+++.+||++||++|||++|
T Consensus       243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~e  299 (319)
T 4euu_A          243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQ  299 (319)
T ss_dssp             CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHH
T ss_pred             CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHH
Confidence            10                0  111223456788999999999999999999999864


No 41 
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=1.8e-40  Score=302.95  Aligned_cols=236  Identities=21%  Similarity=0.248  Sum_probs=166.6

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhccC-CCceeeeeeeeeeCCceeEEEeccCCCCHHH
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRIH-HFHIVRLLGFCSEGNRRTLIYEFMPNGSLQK  187 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~  187 (363)
                      .++.+++|.++.+...  ++.||||++...  ....+.+|+.+++++. |+||+++++++.++...++||||+++++|.+
T Consensus        18 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   95 (325)
T 3kn6_A           18 PLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFE   95 (325)
T ss_dssp             CSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHH
Confidence            3566666666655543  445999998643  3467789999999997 9999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCC---CeeEeccccceeccCCcccc
Q 039471          188 FIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF---QPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       188 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      ++...      ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++   .+||+|||+++........ 
T Consensus        96 ~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~-  165 (325)
T 3kn6_A           96 RIKKK------KHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-  165 (325)
T ss_dssp             HHHHC------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred             HHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc-
Confidence            99542      569999999999999999999999   9999999999999998665   7999999999876544322 


Q ss_pred             ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          265 SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                       .....||..|+|||++        +|+||||+++|||++|+.||............ ..+...+..+..   .......
T Consensus       166 -~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~-~~~~~~i~~~~~---~~~~~~~  240 (325)
T 3kn6_A          166 -LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSA-VEIMKKIKKGDF---SFEGEAW  240 (325)
T ss_dssp             -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCH-HHHHHHHTTTCC---CCCSHHH
T ss_pred             -ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccH-HHHHHHHHcCCC---CCCcccc
Confidence             2345689999999998        79999999999999999999865443221111 122233332211   1111222


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+++++.+++.+||+.||++|||++|
T Consensus       241 ~~~s~~~~~li~~~L~~dP~~Rpt~~e  267 (325)
T 3kn6_A          241 KNVSQEAKDLIQGLLTVDPNKRLKMSG  267 (325)
T ss_dssp             HTSCHHHHHHHHHHHCCCTTTCCCTTT
T ss_pred             cCCCHHHHHHHHHHCCCChhHCCCHHH
Confidence            346788999999999999999999976


No 42 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=8.7e-41  Score=305.07  Aligned_cols=231  Identities=23%  Similarity=0.383  Sum_probs=179.1

Q ss_pred             cccccccCCcceeecc-----CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          111 SLISFNLTNSKFFFLH-----SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~-----~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      .++.+++|.++.+...     +..||||++....  ...+.|.+|+.++++++|+||+++++++.+++..++||||++++
T Consensus        56 ~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  135 (325)
T 3kul_A           56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENG  135 (325)
T ss_dssp             EEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTC
T ss_pred             EEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCC
Confidence            3456666666554442     1229999997532  23457899999999999999999999999999999999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++...     ...+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++........
T Consensus       136 ~L~~~l~~~-----~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  207 (325)
T 3kul_A          136 SLDTFLRTH-----DGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA  207 (325)
T ss_dssp             BHHHHHHTT-----TTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC----C
T ss_pred             cHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccccccCccc
Confidence            999999533     2569999999999999999999999   99999999999999999999999999999887654321


Q ss_pred             -cccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCC
Q 039471          264 -VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEE  333 (363)
Q Consensus       264 -~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (363)
                       .......+|..|+|||++        +||||||+++|||++ |+.||.......        +...+..+..      .
T Consensus       208 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--------~~~~~~~~~~------~  273 (325)
T 3kul_A          208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--------VISSVEEGYR------L  273 (325)
T ss_dssp             CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--------HHHHHHTTCC------C
T ss_pred             eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--------HHHHHHcCCC------C
Confidence             112334467789999988        799999999999998 999986643321        2222222211      1


Q ss_pred             CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          334 DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       334 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+..++..+.+++.+||+.||++|||++|
T Consensus       274 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~e  303 (325)
T 3kul_A          274 PAPMGCPHALHQLMLDCWHKDRAQRPRFSQ  303 (325)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCCcCHHHHHHHHHHccCChhhCcCHHH
Confidence            233455678999999999999999999864


No 43 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=2.2e-40  Score=309.13  Aligned_cols=234  Identities=20%  Similarity=0.260  Sum_probs=180.3

Q ss_pred             ccccccccCCcceeeccC--CeeEEEEcccCC----cChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCC
Q 039471          110 QSLISFNLTNSKFFFLHS--NEIAVKMLEHLK----GNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~--~~vAvK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      ..++.+++|.+..+....  +.||||+++...    ...+.+.+|..++.++ +||||+++++++.++...++||||+++
T Consensus        58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~g  137 (396)
T 4dc2_A           58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG  137 (396)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCC
Confidence            345666666665554443  349999997432    2335688999999887 799999999999999999999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      |+|..++...      ..+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus       138 g~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~  208 (396)
T 4dc2_A          138 GDLMFHMQRQ------RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD  208 (396)
T ss_dssp             CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred             CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence            9999999543      469999999999999999999999   9999999999999999999999999999986332221


Q ss_pred             ccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccc-cchHHHHHHHhhhccccccccCC
Q 039471          263 IVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQ-IYFPEWIYNRMRLGQELCLDFEE  333 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  333 (363)
                        ......||+.|+|||++        +|+||||+++|||++|+.||......... ....+.+...+....       .
T Consensus       209 --~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-------~  279 (396)
T 4dc2_A          209 --TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-------I  279 (396)
T ss_dssp             --CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-------C
T ss_pred             --ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc-------c
Confidence              12456799999999998        79999999999999999999653321111 111122333332221       1


Q ss_pred             CCcHHHHHHHHHHHHHhccCCCCCCCCC
Q 039471          334 DGDEGIARKLAIVAIWCIQWNPTERPSM  361 (363)
Q Consensus       334 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~  361 (363)
                      ..+..++.++.+++.+||+.||++||++
T Consensus       280 ~~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          280 RIPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            2233467789999999999999999996


No 44 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=8e-41  Score=303.23  Aligned_cols=234  Identities=22%  Similarity=0.385  Sum_probs=179.9

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccC-CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHL-KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~  186 (363)
                      ..++.+++|.++.+...  +..||+|++... ....+.|.+|++++++++|+||+++++++.++...++||||+++++|.
T Consensus        16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~   95 (310)
T 3s95_A           16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLR   95 (310)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred             ceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHH
Confidence            34566666666555543  444999988543 234468999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc-
Q 039471          187 KFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-  265 (363)
Q Consensus       187 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-  265 (363)
                      +++....     ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......... 
T Consensus        96 ~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  167 (310)
T 3s95_A           96 GIIKSMD-----SQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG  167 (310)
T ss_dssp             HHHHHCC-----TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred             HHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence            9996532     569999999999999999999999   9999999999999999999999999999987654332110 


Q ss_pred             -----------cccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccc
Q 039471          266 -----------RTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQE  326 (363)
Q Consensus       266 -----------~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (363)
                                 .....||+.|+|||++        +||||||+++|||++|..|+.............  ......    
T Consensus       168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~--~~~~~~----  241 (310)
T 3s95_A          168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN--VRGFLD----  241 (310)
T ss_dssp             ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC--HHHHHH----
T ss_pred             cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh--hhcccc----
Confidence                       1145689999999987        799999999999999999886544332211100  000000    


Q ss_pred             cccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          327 LCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       327 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                            ...+..+++.+.+++.+||+.||++|||++|
T Consensus       242 ------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~  272 (310)
T 3s95_A          242 ------RYCPPNCPPSFFPITVRCCDLDPEKRPSFVK  272 (310)
T ss_dssp             ------HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ------ccCCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence                  0112234466899999999999999999853


No 45 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=2.6e-40  Score=306.21  Aligned_cols=231  Identities=20%  Similarity=0.276  Sum_probs=181.7

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ..++.+++|.++.+...  +..||+|++......   .+.+.+|+.++++++||||+++++++.+++..++||||+++++
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~  114 (362)
T 2bdw_A           35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE  114 (362)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCC
Confidence            33455566655554433  445999999754322   3578899999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCC---CCeeEeccccceeccCCc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHN---FQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~---~~~kl~Dfg~a~~~~~~~  261 (363)
                      |.+++.      ....+++..+..++.||+.||+|||+   .+|+||||||+|||++.+   +.+||+|||++.......
T Consensus       115 L~~~l~------~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~  185 (362)
T 2bdw_A          115 LFEDIV------AREFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE  185 (362)
T ss_dssp             HHHHHT------TCSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred             HHHHHH------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence            999983      33569999999999999999999999   999999999999999865   459999999998776443


Q ss_pred             cccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCC
Q 039471          262 SIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEE  333 (363)
Q Consensus       262 ~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (363)
                      ..   ....||+.|+|||++        +|+||||+++|||++|..||.......        +...+..+..   ....
T Consensus       186 ~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~--------~~~~i~~~~~---~~~~  251 (362)
T 2bdw_A          186 AW---HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--------LYAQIKAGAY---DYPS  251 (362)
T ss_dssp             SC---CCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHTCC---CCCT
T ss_pred             cc---ccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHhCCC---CCCc
Confidence            22   345699999999987        899999999999999999997643321        2223322211   1111


Q ss_pred             CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          334 DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       334 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .....+++.+.+++.+||+.||++|||++|
T Consensus       252 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  281 (362)
T 2bdw_A          252 PEWDTVTPEAKSLIDSMLTVNPKKRITADQ  281 (362)
T ss_dssp             TGGGGSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             ccccCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            223345678999999999999999999753


No 46 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=2.2e-40  Score=315.35  Aligned_cols=225  Identities=24%  Similarity=0.377  Sum_probs=180.3

Q ss_pred             ccccccCCcceeeccCCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCC-ceeEEEeccCCCCHHHHhh
Q 039471          112 LISFNLTNSKFFFLHSNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGN-RRTLIYEFMPNGSLQKFIF  190 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~~sL~~~l~  190 (363)
                      ++.+++|.++.....++.||||+++... ..+.|.+|+.++++++|+||+++++++.+.. ..++||||+++|+|.+++.
T Consensus       201 lG~G~fg~V~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~  279 (450)
T 1k9a_A          201 IGKGEFGDVMLGDYRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR  279 (450)
T ss_dssp             EEECSSEEEEEEEETTEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHH
T ss_pred             ecCcCCeeEEEEEecCCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHH
Confidence            4555666666555667779999997544 5678999999999999999999999987655 7899999999999999996


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccccccc
Q 039471          191 SKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTAAR  270 (363)
Q Consensus       191 ~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  270 (363)
                      ....    ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......     ....
T Consensus       280 ~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-----~~~~  347 (450)
T 1k9a_A          280 SRGR----SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGK  347 (450)
T ss_dssp             HHCT----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----------C
T ss_pred             hcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc-----cCCC
Confidence            5432    457999999999999999999999   999999999999999999999999999998654322     2235


Q ss_pred             ccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHH
Q 039471          271 GTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIAR  341 (363)
Q Consensus       271 gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (363)
                      ++..|+|||++        +||||||+++|||++ |+.||.......        +...+..+..      ...+..+++
T Consensus       348 ~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--------~~~~i~~~~~------~~~p~~~~~  413 (450)
T 1k9a_A          348 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------VVPRVEKGYK------MDAPDGCPP  413 (450)
T ss_dssp             CCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--------HHHHHHTTCC------CCCCTTCCH
T ss_pred             CCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCC------CCCCCcCCH
Confidence            78899999988        899999999999998 999987543221        2223332222      223345678


Q ss_pred             HHHHHHHHhccCCCCCCCCCCC
Q 039471          342 KLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       342 ~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .+.+++.+||+.||++|||++|
T Consensus       414 ~l~~li~~cl~~dp~~Rpt~~~  435 (450)
T 1k9a_A          414 AVYDVMKNCWHLDAATRPTFLQ  435 (450)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHH
Confidence            8999999999999999999853


No 47 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=8.5e-41  Score=305.94  Aligned_cols=226  Identities=21%  Similarity=0.333  Sum_probs=180.2

Q ss_pred             ccccccccCCcceeec--cCCeeEEEEcccC----CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFL--HSNEIAVKMLEHL----KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~--~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ..++.+++|.++.+..  .++.||||++...    ....+.+.+|+.+++.++||||+++++++.+....++||||+ +|
T Consensus        15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g   93 (336)
T 3h4j_B           15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GG   93 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CE
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CC
Confidence            3345566666555543  3445999998632    334568899999999999999999999999999999999999 68


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++...      ..+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||++.........
T Consensus        94 ~l~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~  164 (336)
T 3h4j_B           94 ELFDYIVEK------KRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFL  164 (336)
T ss_dssp             EHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTT
T ss_pred             cHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCccc
Confidence            999988543      469999999999999999999999   99999999999999999999999999999876554332


Q ss_pred             cccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCC
Q 039471          264 VSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEED  334 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                         ....||+.|+|||++         +|+||||+++|||++|+.||.........        ..+.       .....
T Consensus       165 ---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~--------~~i~-------~~~~~  226 (336)
T 3h4j_B          165 ---KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF--------KKVN-------SCVYV  226 (336)
T ss_dssp             ---CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB--------CCCC-------SSCCC
T ss_pred             ---ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH--------HHHH-------cCCCC
Confidence               445699999999987         79999999999999999999754322110        0010       01112


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .+...++.+.+++.+||+.||.+|||++|
T Consensus       227 ~p~~~s~~~~~li~~~L~~dP~~Rpt~~e  255 (336)
T 3h4j_B          227 MPDFLSPGAQSLIRRMIVADPMQRITIQE  255 (336)
T ss_dssp             CCTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             CcccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            23345678999999999999999999864


No 48 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=3.3e-40  Score=306.90  Aligned_cols=227  Identities=20%  Similarity=0.304  Sum_probs=182.8

Q ss_pred             ccccccccCCcceeeccC--CeeEEEEccc----CCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLHS--NEIAVKMLEH----LKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~--~~vAvK~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ..++.+++|.++.+....  +.||+|++..    .....+.+.+|+.++++++|+||+++++++.+....++||||+++|
T Consensus        21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg  100 (384)
T 4fr4_A           21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGG  100 (384)
T ss_dssp             EEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCC
Confidence            445666666666555443  3399999863    2345578899999999999999999999999999999999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++..      ...+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++........
T Consensus       101 ~L~~~l~~------~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~  171 (384)
T 4fr4_A          101 DLRYHLQQ------NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI  171 (384)
T ss_dssp             EHHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCB
T ss_pred             cHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCCCce
Confidence            99999943      3569999999999999999999999   99999999999999999999999999999987654332


Q ss_pred             cccccccccccccCCccc-----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccC
Q 039471          264 VSRTAARGTSGYIAPELF-----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFE  332 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~-----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (363)
                         ....||+.|+|||++           +|+|||||++|||++|+.||........     ..+...+....       
T Consensus       172 ---~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~-----~~~~~~~~~~~-------  236 (384)
T 4fr4_A          172 ---TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-----KEIVHTFETTV-------  236 (384)
T ss_dssp             ---CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH-----HHHHHHHHHCC-------
T ss_pred             ---eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH-----HHHHHHHhhcc-------
Confidence               456699999999987           6999999999999999999975433221     11122221111       


Q ss_pred             CCCcHHHHHHHHHHHHHhccCCCCCCCC
Q 039471          333 EDGDEGIARKLAIVAIWCIQWNPTERPS  360 (363)
Q Consensus       333 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs  360 (363)
                      ...+..++..+.+++.+||+.||++||+
T Consensus       237 ~~~p~~~s~~~~~li~~lL~~dP~~R~s  264 (384)
T 4fr4_A          237 VTYPSAWSQEMVSLLKKLLEPNPDQRFS  264 (384)
T ss_dssp             CCCCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             cCCCCcCCHHHHHHHHHHhcCCHhHhcc
Confidence            1223445678999999999999999998


No 49 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=8.9e-41  Score=318.56  Aligned_cols=229  Identities=24%  Similarity=0.370  Sum_probs=181.1

Q ss_pred             ccccccCCcceeecc-CCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHHHhh
Q 039471          112 LISFNLTNSKFFFLH-SNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKFIF  190 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~-~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~  190 (363)
                      ++.+++|.++..... +..||||+++......+.|.+|+.++++++|+||+++++++. ....++||||+++|+|.+++.
T Consensus       196 lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~  274 (454)
T 1qcf_A          196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLK  274 (454)
T ss_dssp             EECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHH
T ss_pred             cccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHH
Confidence            444555555444443 344999999876667789999999999999999999999987 567899999999999999995


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccccccc
Q 039471          191 SKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTAAR  270 (363)
Q Consensus       191 ~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  270 (363)
                      ...    ...+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++....... .......
T Consensus       275 ~~~----~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~  346 (454)
T 1qcf_A          275 SDE----GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAK  346 (454)
T ss_dssp             SHH----HHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH-HTTCSSS
T ss_pred             hcc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce-eccCCCc
Confidence            432    1368899999999999999999999   9999999999999999999999999999987654322 1223445


Q ss_pred             ccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHH
Q 039471          271 GTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIAR  341 (363)
Q Consensus       271 gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (363)
                      ++..|+|||++        +||||||+++|||++ |+.||.......        +...+..+..      ...+..+++
T Consensus       347 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--------~~~~i~~~~~------~~~~~~~~~  412 (454)
T 1qcf_A          347 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--------VIRALERGYR------MPRPENCPE  412 (454)
T ss_dssp             SCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--------HHHHHHHTCC------CCCCTTSCH
T ss_pred             ccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCC------CCCCCCCCH
Confidence            67889999988        799999999999999 999987543221        2223332221      122345667


Q ss_pred             HHHHHHHHhccCCCCCCCCCCC
Q 039471          342 KLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       342 ~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .+.+++.+||+.||++|||++|
T Consensus       413 ~l~~li~~cl~~dp~~RPt~~~  434 (454)
T 1qcf_A          413 ELYNIMMRCWKNRPEERPTFEY  434 (454)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHH
Confidence            8999999999999999999853


No 50 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=2.1e-40  Score=305.57  Aligned_cols=226  Identities=21%  Similarity=0.252  Sum_probs=177.9

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccC----CcChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHL----KGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      ..++.+++|.+..+...  ++.||||+++..    ....+.+.+|..+++.+ +|+||+++++++.+....++||||+++
T Consensus        29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~g  108 (353)
T 3txo_A           29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNG  108 (353)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCC
Confidence            34556666666555443  344999999642    23456788999999988 699999999999999999999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      |+|.+++...      ..+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus       109 g~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~  179 (353)
T 3txo_A          109 GDLMFHIQKS------RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV  179 (353)
T ss_dssp             CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred             CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeecccCCc
Confidence            9999999543      469999999999999999999999   9999999999999999999999999999986433222


Q ss_pred             ccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCC
Q 039471          263 IVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEED  334 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                        ......||+.|+|||++        +|+||||+++|||++|+.||.......        +...+..+..       .
T Consensus       180 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~--------~~~~i~~~~~-------~  242 (353)
T 3txo_A          180 --TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD--------LFEAILNDEV-------V  242 (353)
T ss_dssp             --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCC-------C
T ss_pred             --cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH--------HHHHHHcCCC-------C
Confidence              12445699999999988        899999999999999999997654322        2333332221       1


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSM  361 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~  361 (363)
                      .+...+..+.+++.+||+.||++||++
T Consensus       243 ~p~~~~~~~~~li~~lL~~dP~~R~~~  269 (353)
T 3txo_A          243 YPTWLHEDATGILKSFMTKNPTMRLGS  269 (353)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred             CCCCCCHHHHHHHHHHhhhCHHHccCC
Confidence            223356779999999999999999997


No 51 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=1.4e-40  Score=297.63  Aligned_cols=229  Identities=21%  Similarity=0.358  Sum_probs=181.1

Q ss_pred             ccccccCCcceeeccCC-eeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHHHhh
Q 039471          112 LISFNLTNSKFFFLHSN-EIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKFIF  190 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~  190 (363)
                      ++.+++|.++.....+. .||||++.......+++.+|++++++++|+||+++++++.+++..++||||+++++|.+++.
T Consensus        32 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  111 (283)
T 3gen_A           32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR  111 (283)
T ss_dssp             CC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHH
T ss_pred             cCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHH
Confidence            44555555544444433 49999998777777899999999999999999999999999999999999999999999995


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccccccc
Q 039471          191 SKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTAAR  270 (363)
Q Consensus       191 ~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  270 (363)
                      ..     ...+++..++.++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++........ ......
T Consensus       112 ~~-----~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~  182 (283)
T 3gen_A          112 EM-----RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSK  182 (283)
T ss_dssp             CG-----GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH-STTSTT
T ss_pred             Hh-----ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccccccc-cccCCc
Confidence            43     2569999999999999999999999   99999999999999999999999999999876543221 223445


Q ss_pred             ccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHH
Q 039471          271 GTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIAR  341 (363)
Q Consensus       271 gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (363)
                      +|..|+|||++        +|+||||+++|||++ |+.||.......        ....+..+..      ...+...++
T Consensus       183 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~--------~~~~~~~~~~------~~~~~~~~~  248 (283)
T 3gen_A          183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--------TAEHIAQGLR------LYRPHLASE  248 (283)
T ss_dssp             SCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--------HHHHHHTTCC------CCCCTTCCH
T ss_pred             cCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH--------HHHHHhcccC------CCCCCcCCH
Confidence            67889999987        799999999999998 999987644321        2222222211      112233456


Q ss_pred             HHHHHHHHhccCCCCCCCCCCC
Q 039471          342 KLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       342 ~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .+.+++.+||+.+|++|||++|
T Consensus       249 ~l~~li~~~l~~~p~~Rps~~~  270 (283)
T 3gen_A          249 KVYTIMYSCWHEKADERPTFKI  270 (283)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHH
Confidence            7999999999999999999854


No 52 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.2e-40  Score=298.71  Aligned_cols=229  Identities=22%  Similarity=0.314  Sum_probs=175.6

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCc---------------------------ChhHHHHHHHHHhccCCCce
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKG---------------------------NGQEFINEVATIGRIHHFHI  160 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~---------------------------~~~~~~~E~~~l~~l~h~ni  160 (363)
                      ..++.+++|.++.+...  ++.||||++.....                           ..+.+.+|++++++++|+||
T Consensus        19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   98 (298)
T 2zv2_A           19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNV   98 (298)
T ss_dssp             EEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTB
T ss_pred             eEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCC
Confidence            33455666665555432  34499999864321                           13578899999999999999


Q ss_pred             eeeeeeeee--CCceeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCce
Q 039471          161 VRLLGFCSE--GNRRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNI  238 (363)
Q Consensus       161 v~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Ni  238 (363)
                      +++++++.+  ....++||||+++++|.+++       ....+++..+..++.|++.||+|||+   .+|+||||||+||
T Consensus        99 v~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-------~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Ni  168 (298)
T 2zv2_A           99 VKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-------TLKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNL  168 (298)
T ss_dssp             CCEEEEEECSSSSEEEEEEECCTTCBSCCSS-------CSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGE
T ss_pred             CeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHE
Confidence            999999976  56899999999999998865       22569999999999999999999999   9999999999999


Q ss_pred             EEcCCCCeeEeccccceeccCCccccccccccccccccCCccc-----------cCceehhHHHHHHhcCCCCCCcchhc
Q 039471          239 LLDHNFQPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPELF-----------SRNFCYGMMLLEMVGCRKNNDPAVEI  307 (363)
Q Consensus       239 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-----------~Di~slG~il~el~~g~~~~~~~~~~  307 (363)
                      |++.++.+||+|||+++........  .....||+.|+|||++           +|+||||+++|||++|+.||......
T Consensus       169 l~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~  246 (298)
T 2zv2_A          169 LVGEDGHIKIADFGVSNEFKGSDAL--LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM  246 (298)
T ss_dssp             EECTTSCEEECCCTTCEECSSSSCE--ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             EECCCCCEEEecCCCcccccccccc--ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence            9999999999999999877654322  2345689999999987           59999999999999999999754321


Q ss_pred             ccccchHHHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          308 QSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .        +...+.... ..    .......++.+.+++.+||+.||++|||++|
T Consensus       247 ~--------~~~~~~~~~-~~----~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e  289 (298)
T 2zv2_A          247 C--------LHSKIKSQA-LE----FPDQPDIAEDLKDLITRMLDKNPESRIVVPE  289 (298)
T ss_dssp             H--------HHHHHHHCC-CC----CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred             H--------HHHHHhccc-CC----CCCccccCHHHHHHHHHHhhcChhhCCCHHH
Confidence            1        122222111 11    1112245677999999999999999999864


No 53 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=3.5e-40  Score=300.05  Aligned_cols=244  Identities=23%  Similarity=0.322  Sum_probs=178.2

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ..++.+++|.++.+...  +..||||+++...  ...+.+.+|+.++++++|+||+++++++.+++..++||||++ ++|
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L   89 (317)
T 2pmi_A           11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDL   89 (317)
T ss_dssp             --------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBH
T ss_pred             eEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCH
Confidence            44555555555554433  4449999986432  334688999999999999999999999999999999999998 599


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      .+++...........+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++........  
T Consensus        90 ~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--  164 (317)
T 2pmi_A           90 KKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT--  164 (317)
T ss_dssp             HHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC--
T ss_pred             HHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecCCCccc--
Confidence            9999765433334569999999999999999999999   99999999999999999999999999999876543221  


Q ss_pred             cccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcc-----------
Q 039471          266 RTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQ-----------  325 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  325 (363)
                      .....||..|+|||++         +|+|||||++|||++|+.||.........    ..+.+......           
T Consensus       165 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~  240 (317)
T 2pmi_A          165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL----KLIFDIMGTPNESLWPSVTKLP  240 (317)
T ss_dssp             CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHHHHCSCCTTTCGGGGGCT
T ss_pred             CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH----HHHHHHhCCCChhHhhhhhhhh
Confidence            2345689999999986         79999999999999999999765433211    11111100000           


Q ss_pred             cccccc------------CCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          326 ELCLDF------------EEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       326 ~~~~~~------------~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ......            ........+..+.+++.+||+.||++|||++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  290 (317)
T 2pmi_A          241 KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQ  290 (317)
T ss_dssp             TCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             hcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHH
Confidence            000000            00011134567999999999999999999854


No 54 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=3.1e-40  Score=303.32  Aligned_cols=227  Identities=19%  Similarity=0.252  Sum_probs=182.4

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccC----CcChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHL----KGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      ..++.+++|.+..+...  ++.||||+++..    ....+.+.+|..++..+ +||||+++++++.+....++||||+++
T Consensus        23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~g  102 (345)
T 1xjd_A           23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG  102 (345)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCC
Confidence            34566666666655543  334999999743    34556788999999877 899999999999999999999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      |+|.+++...      ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus       103 g~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~  173 (345)
T 1xjd_A          103 GDLMYHIQSC------HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA  173 (345)
T ss_dssp             CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred             CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC
Confidence            9999999543      468999999999999999999999   9999999999999999999999999999986433221


Q ss_pred             ccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCC
Q 039471          263 IVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEED  334 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                        ......||+.|+|||++        +|+||||+++|||++|+.||.......        +...+..+..       .
T Consensus       174 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--------~~~~i~~~~~-------~  236 (345)
T 1xjd_A          174 --KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE--------LFHSIRMDNP-------F  236 (345)
T ss_dssp             --CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCC-------C
T ss_pred             --cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH--------HHHHHHhCCC-------C
Confidence              12455699999999987        799999999999999999997654321        2233322211       1


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSMP  362 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~  362 (363)
                      .+..+++.+.+++.+||+.||++|||+.
T Consensus       237 ~p~~~s~~~~~li~~lL~~dp~~R~~~~  264 (345)
T 1xjd_A          237 YPRWLEKEAKDLLVKLFVREPEKRLGVR  264 (345)
T ss_dssp             CCTTSCHHHHHHHHHHSCSSGGGSBTTB
T ss_pred             CCcccCHHHHHHHHHHhcCCHhHcCCCh
Confidence            2234567899999999999999999986


No 55 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=2.9e-40  Score=313.20  Aligned_cols=232  Identities=21%  Similarity=0.266  Sum_probs=182.0

Q ss_pred             ccccccccCCcceeec--cCCeeEEEEcccCCc---ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          110 QSLISFNLTNSKFFFL--HSNEIAVKMLEHLKG---NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ..++.+++|.++.+..  .++.+|+|++.....   ..+.+.+|+.++++++||||+++++++.+++..++||||+++|+
T Consensus        17 ~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~   96 (444)
T 3soa_A           17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGE   96 (444)
T ss_dssp             EEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCB
T ss_pred             EEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCC
Confidence            4455666666555433  344599999875432   23578899999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEc---CCCCeeEeccccceeccCCc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD---HNFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~---~~~~~kl~Dfg~a~~~~~~~  261 (363)
                      |.+++...      ..+++..+..++.||+.||+|||+   .+|+||||||+|||++   .++.+||+|||++.......
T Consensus        97 L~~~i~~~------~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~  167 (444)
T 3soa_A           97 LFEDIVAR------EYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ  167 (444)
T ss_dssp             HHHHHHHC------SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred             HHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence            99999543      569999999999999999999999   9999999999999998   46789999999998765543


Q ss_pred             cccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCC
Q 039471          262 SIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEE  333 (363)
Q Consensus       262 ~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (363)
                      ..  .....||+.|+|||++        +||||+|+++|+|++|..||.......        +...+..+..   ....
T Consensus       168 ~~--~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~--------~~~~i~~~~~---~~~~  234 (444)
T 3soa_A          168 QA--WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR--------LYQQIKAGAY---DFPS  234 (444)
T ss_dssp             CB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--------HHHHHHHTCC---CCCT
T ss_pred             ce--eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH--------HHHHHHhCCC---CCCc
Confidence            22  2345699999999988        799999999999999999997654321        2233332221   1112


Q ss_pred             CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          334 DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       334 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ......++.+.+++.+||+.||++|||++|
T Consensus       235 ~~~~~~s~~~~~li~~~L~~dP~~Rpta~e  264 (444)
T 3soa_A          235 PEWDTVTPEAKDLINKMLTINPSKRITAAE  264 (444)
T ss_dssp             TTTTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             cccccCCHHHHHHHHHHcCCChhHCCCHHH
Confidence            222355678999999999999999999854


No 56 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=9.8e-41  Score=309.73  Aligned_cols=237  Identities=22%  Similarity=0.332  Sum_probs=182.3

Q ss_pred             ccccccccCCcceeecc-------CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEecc
Q 039471          110 QSLISFNLTNSKFFFLH-------SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~-------~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      ..++.+++|.++.+...       +..||||++....  ....++.+|+.++++++|+||+++++++.++...++||||+
T Consensus        77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~  156 (367)
T 3l9p_A           77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELM  156 (367)
T ss_dssp             EECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeC
Confidence            34555566655554432       2249999996432  23357889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhhcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCC---CeeEecccccee
Q 039471          181 PNGSLQKFIFSKTNS-SSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF---QPKISDFGLAKL  256 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~---~~kl~Dfg~a~~  256 (363)
                      ++|+|.+++...... .....+++..++.++.||+.||+|||+   .+|+||||||+|||++.++   .+||+|||+++.
T Consensus       157 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~  233 (367)
T 3l9p_A          157 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD  233 (367)
T ss_dssp             TTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred             CCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEECCCccccc
Confidence            999999999765431 223569999999999999999999999   9999999999999999554   599999999986


Q ss_pred             ccCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhcccc
Q 039471          257 CSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQEL  327 (363)
Q Consensus       257 ~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (363)
                      ..............+|+.|+|||++        +|||||||++|||++ |..||.......        +...+..+...
T Consensus       234 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~--------~~~~i~~~~~~  305 (367)
T 3l9p_A          234 IYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--------VLEFVTSGGRM  305 (367)
T ss_dssp             HHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--------HHHHHHTTCCC
T ss_pred             cccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCCC
Confidence            6443332233445678999999987        899999999999998 999987653321        22223222211


Q ss_pred             ccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          328 CLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       328 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                            ..+..++..+.+++.+||+.||++|||++|
T Consensus       306 ------~~~~~~~~~l~~li~~~l~~dP~~Rps~~e  335 (367)
T 3l9p_A          306 ------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAI  335 (367)
T ss_dssp             ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ------CCCccCCHHHHHHHHHHcCCCHhHCcCHHH
Confidence                  223345667999999999999999999854


No 57 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=5e-40  Score=297.69  Aligned_cols=235  Identities=24%  Similarity=0.341  Sum_probs=175.1

Q ss_pred             ccccccccCCcceeeccCCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHH
Q 039471          110 QSLISFNLTNSKFFFLHSNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~  186 (363)
                      ..++.+++|.++.+.. ...+|+|+++.....   .+.|.+|++++++++|+||+++++++.. ...++||||+++++|.
T Consensus        42 ~~lG~G~~g~Vy~~~~-~~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e~~~~~~L~  119 (307)
T 3lb7_A           42 TRIGSGSFGTVYKGKW-HGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLY  119 (307)
T ss_dssp             EEEEECSSCEEEEEES-SSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCBHH
T ss_pred             eEecCCCCeEEEEEEE-CCEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEecCCCCcHH
Confidence            3455556655554433 345999998754332   3578899999999999999999998754 5588999999999999


Q ss_pred             HHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccc
Q 039471          187 KFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSR  266 (363)
Q Consensus       187 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~  266 (363)
                      +++...     ...+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++...........
T Consensus       120 ~~l~~~-----~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~  191 (307)
T 3lb7_A          120 KHLHVQ-----ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV  191 (307)
T ss_dssp             HHHHTS-----CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC----------
T ss_pred             HHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceecccccccccc
Confidence            999533     3579999999999999999999999   99999999999999999999999999999866543222223


Q ss_pred             ccccccccccCCccc-----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          267 TAARGTSGYIAPELF-----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       267 ~~~~gt~~y~aPE~~-----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                      ....||..|+|||++           +||||||+++|||++|+.||........       +......+..  .......
T Consensus       192 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-------~~~~~~~~~~--~~~~~~~  262 (307)
T 3lb7_A          192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-------IIFMVGRGYA--SPDLSKL  262 (307)
T ss_dssp             --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-------HHHHHHHTCC--CCCSTTS
T ss_pred             cCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH-------HHHHHhcCCC--Ccchhhh
Confidence            445699999999986           7999999999999999999976433221       1111111111  1111122


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...+++.+.+++.+||+.+|++|||++|
T Consensus       263 ~~~~~~~l~~li~~~l~~~p~~RPs~~~  290 (307)
T 3lb7_A          263 YKNCPKAMKRLVADCVKKVKEERPLFPQ  290 (307)
T ss_dssp             CSSSCHHHHHHHHHHSCSSSTTSCCHHH
T ss_pred             hcCCcHHHHHHHHHHhhCChhhCcCHHH
Confidence            2345678999999999999999999854


No 58 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=1.5e-40  Score=308.91  Aligned_cols=230  Identities=20%  Similarity=0.259  Sum_probs=179.2

Q ss_pred             ccccccCCcceeecc--CCeeEEEEcccCC-cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHHH
Q 039471          112 LISFNLTNSKFFFLH--SNEIAVKMLEHLK-GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKF  188 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~--~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~  188 (363)
                      ++.+++|.++.+...  +..||+|++.... ...+++.+|+.++++++|+||+++++++.+.+..++||||+++++|.++
T Consensus        97 lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~  176 (373)
T 2x4f_A           97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDR  176 (373)
T ss_dssp             CC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHH
T ss_pred             EecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHH
Confidence            566666666655433  4459999997543 3456899999999999999999999999999999999999999999998


Q ss_pred             hhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEE--cCCCCeeEeccccceeccCCcccccc
Q 039471          189 IFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL--DHNFQPKISDFGLAKLCSKDISIVSR  266 (363)
Q Consensus       189 l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill--~~~~~~kl~Dfg~a~~~~~~~~~~~~  266 (363)
                      +....     ..+++..+..++.||+.||+|||+   .+|+||||||+|||+  +.++.+||+|||+++........   
T Consensus       177 l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~---  245 (373)
T 2x4f_A          177 IIDES-----YNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL---  245 (373)
T ss_dssp             HHHTG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC---
T ss_pred             HHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc---
Confidence            85432     468999999999999999999999   999999999999999  56778999999999987654432   


Q ss_pred             ccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHH
Q 039471          267 TAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEG  338 (363)
Q Consensus       267 ~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (363)
                      ....||+.|+|||++        +|+||||+++|||++|+.||.......        ....+....   ..........
T Consensus       246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--------~~~~i~~~~---~~~~~~~~~~  314 (373)
T 2x4f_A          246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE--------TLNNILACR---WDLEDEEFQD  314 (373)
T ss_dssp             CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHHTC---CCSCSGGGTT
T ss_pred             ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhcc---CCCChhhhcc
Confidence            344689999999987        899999999999999999997654322        111221111   1111122234


Q ss_pred             HHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          339 IARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       339 ~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +++.+.+++.+||+.||++|||++|
T Consensus       315 ~~~~~~~li~~~L~~dp~~Rps~~e  339 (373)
T 2x4f_A          315 ISEEAKEFISKLLIKEKSWRISASE  339 (373)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHH
Confidence            5678999999999999999999754


No 59 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=1.9e-40  Score=302.42  Aligned_cols=236  Identities=22%  Similarity=0.352  Sum_probs=169.2

Q ss_pred             ccccccccCCcceeeccCC-----eeEEEEcccC---CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCce------eE
Q 039471          110 QSLISFNLTNSKFFFLHSN-----EIAVKMLEHL---KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRR------TL  175 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~-----~vAvK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~------~l  175 (363)
                      ..++.+++|.++.+.....     .||||++...   ....+++.+|++++++++|+||+++++++......      ++
T Consensus        29 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~  108 (323)
T 3qup_A           29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMV  108 (323)
T ss_dssp             EEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEE
T ss_pred             ceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEE
Confidence            3445555655555544332     5999999753   23346899999999999999999999999776654      99


Q ss_pred             EEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccce
Q 039471          176 IYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK  255 (363)
Q Consensus       176 v~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~  255 (363)
                      ||||+++++|.+++...........+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       109 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~  185 (323)
T 3qup_A          109 ILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSR  185 (323)
T ss_dssp             EEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred             EEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEEEeeccccc
Confidence            99999999999999665433333469999999999999999999999   999999999999999999999999999998


Q ss_pred             eccCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccc
Q 039471          256 LCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQE  326 (363)
Q Consensus       256 ~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (363)
                      ...............++..|+|||.+        +|+||||+++|||++ |+.||.......        ....+..+..
T Consensus       186 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--------~~~~~~~~~~  257 (323)
T 3qup_A          186 KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE--------IYNYLIGGNR  257 (323)
T ss_dssp             ---------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------HHHHHHTTCC
T ss_pred             cccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH--------HHHHHhcCCC
Confidence            77554433333445578889999987        899999999999999 899887644322        2222222211


Q ss_pred             cccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCC
Q 039471          327 LCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMP  362 (363)
Q Consensus       327 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~  362 (363)
                            ...+...+..+.+++.+||+.||++|||++
T Consensus       258 ------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  287 (323)
T 3qup_A          258 ------LKQPPECMEEVYDLMYQCWSADPKQRPSFT  287 (323)
T ss_dssp             ------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred             ------CCCCCccCHHHHHHHHHHccCChhhCcCHH
Confidence                  122334567899999999999999999964


No 60 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=3.6e-40  Score=304.14  Aligned_cols=234  Identities=19%  Similarity=0.232  Sum_probs=180.8

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccC------CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCC
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHL------KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      .++.+++|.++.+...  ++.||||++...      ....+.+.+|+.++++++|+||+++++++.+++..++||||+++
T Consensus        31 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g  110 (351)
T 3c0i_A           31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDG  110 (351)
T ss_dssp             EEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSS
T ss_pred             EEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCC
Confidence            3455566655555433  445999998521      22457899999999999999999999999999999999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCC---eeEeccccceeccC
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ---PKISDFGLAKLCSK  259 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~---~kl~Dfg~a~~~~~  259 (363)
                      ++|.+++.....  ....+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.   +||+|||++.....
T Consensus       111 ~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~  185 (351)
T 3c0i_A          111 ADLCFEIVKRAD--AGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE  185 (351)
T ss_dssp             CBHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCT
T ss_pred             CCHHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcceeEecC
Confidence            999988854321  22468999999999999999999999   99999999999999986654   99999999988765


Q ss_pred             CccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcccccccc
Q 039471          260 DISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDF  331 (363)
Q Consensus       260 ~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (363)
                      ....  .....||+.|+|||++        +|+||||+++|||++|+.||......         ....+..+...   .
T Consensus       186 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------~~~~i~~~~~~---~  251 (351)
T 3c0i_A          186 SGLV--AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER---------LFEGIIKGKYK---M  251 (351)
T ss_dssp             TSCB--CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH---------HHHHHHHTCCC---C
T ss_pred             CCee--ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH---------HHHHHHcCCCC---C
Confidence            4321  2345699999999988        79999999999999999999764321         22222222111   0


Q ss_pred             CCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          332 EEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       332 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .......++..+.+++.+||+.||++|||++|
T Consensus       252 ~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e  283 (351)
T 3c0i_A          252 NPRQWSHISESAKDLVRRMLMLDPAERITVYE  283 (351)
T ss_dssp             CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             CccccccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            00111234678999999999999999999753


No 61 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=2.6e-40  Score=302.17  Aligned_cols=231  Identities=22%  Similarity=0.346  Sum_probs=175.8

Q ss_pred             ccccccccCCcceeeccCC--e----eEEEEcccC--CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccC
Q 039471          110 QSLISFNLTNSKFFFLHSN--E----IAVKMLEHL--KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMP  181 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~--~----vAvK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  181 (363)
                      ..++.+++|.++.+....+  .    ||+|.+...  ....++|.+|+.++++++|+||+++++++.++. .++++||++
T Consensus        21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~~   99 (327)
T 3poz_A           21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMP   99 (327)
T ss_dssp             EEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECCT
T ss_pred             eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEecC
Confidence            3445666666655543222  2    688887533  345578999999999999999999999998754 788999999


Q ss_pred             CCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCc
Q 039471          182 NGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       182 ~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~  261 (363)
                      +|+|.+++....     ..+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus       100 ~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  171 (327)
T 3poz_A          100 FGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             TCBHHHHHHHST-----TSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred             CCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence            999999996543     569999999999999999999999   999999999999999999999999999998876554


Q ss_pred             cccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccC
Q 039471          262 SIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFE  332 (363)
Q Consensus       262 ~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (363)
                      .........+|..|+|||++        +||||||+++|||++ |+.||.......        +...+..+..      
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--------~~~~~~~~~~------  237 (327)
T 3poz_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--------ISSILEKGER------  237 (327)
T ss_dssp             C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------HHHHHHTTCC------
T ss_pred             ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--------HHHHHHcCCC------
Confidence            43333445578899999987        899999999999999 999997643322        2222222211      


Q ss_pred             CCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          333 EDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       333 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...+...+..+.+++.+||+.+|++|||++|
T Consensus       238 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  268 (327)
T 3poz_A          238 LPQPPICTIDVYMIMVKCWMIDADSRPKFRE  268 (327)
T ss_dssp             CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHH
T ss_pred             CCCCccCCHHHHHHHHHHcCCChhhCCCHHH
Confidence            1223345667999999999999999999854


No 62 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=4.4e-40  Score=303.12  Aligned_cols=221  Identities=21%  Similarity=0.248  Sum_probs=180.5

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccC----CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHL----KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      .++.+++|.++.+...  ++.||||++...    ....+.+.+|+.++++++|+||+++++++.++...++||||+++|+
T Consensus        48 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~  127 (350)
T 1rdq_E           48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE  127 (350)
T ss_dssp             EEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred             EeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCc
Confidence            3455556655555443  445999998632    3455788999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++...      ..+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++......   
T Consensus       128 L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~---  195 (350)
T 1rdq_E          128 MFSHLRRI------GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---  195 (350)
T ss_dssp             HHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB---
T ss_pred             HHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCCc---
Confidence            99999543      458999999999999999999999   999999999999999999999999999998765432   


Q ss_pred             ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          265 SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                        ....||+.|+|||++        +|+||||+++|||++|+.||.......        ++..+..+..       ..+
T Consensus       196 --~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--------~~~~i~~~~~-------~~p  258 (350)
T 1rdq_E          196 --WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--------IYEKIVSGKV-------RFP  258 (350)
T ss_dssp             --CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCC-------CCC
T ss_pred             --ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH--------HHHHHHcCCC-------CCC
Confidence              345689999999987        899999999999999999997653321        2333332221       123


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPS  360 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs  360 (363)
                      ..++..+.+++.+||+.||++||+
T Consensus       259 ~~~~~~~~~li~~lL~~dp~~R~~  282 (350)
T 1rdq_E          259 SHFSSDLKDLLRNLLQVDLTKRFG  282 (350)
T ss_dssp             TTCCHHHHHHHHHHSCSCTTTCTT
T ss_pred             CCCCHHHHHHHHHHhhcCHHhccC
Confidence            345678999999999999999998


No 63 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=7.6e-40  Score=297.66  Aligned_cols=221  Identities=22%  Similarity=0.297  Sum_probs=178.6

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccC----CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHL----KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ..++.+++|.+..+...  ++.||+|+++..    ....+.+.+|..+++.++|+||+++++++.+....++||||+++|
T Consensus        12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg   91 (318)
T 1fot_A           12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGG   91 (318)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCC
Confidence            33455555555554433  445999998642    245567889999999999999999999999999999999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++...      ..+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++......  
T Consensus        92 ~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~--  160 (318)
T 1fot_A           92 ELFSLLRKS------QRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT--  160 (318)
T ss_dssp             BHHHHHHHT------SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB--
T ss_pred             CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCcc--
Confidence            999999542      468999999999999999999999   999999999999999999999999999998765432  


Q ss_pred             cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          264 VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                         ....||+.|+|||++        +|+||||+++|||++|+.||.......        .+..+..+.       ...
T Consensus       161 ---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--------~~~~i~~~~-------~~~  222 (318)
T 1fot_A          161 ---YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK--------TYEKILNAE-------LRF  222 (318)
T ss_dssp             ---CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHHCC-------CCC
T ss_pred             ---ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCC-------CCC
Confidence               345689999999987        799999999999999999997643321        222222221       112


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERP  359 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RP  359 (363)
                      +...+.++.+++.+||+.||++||
T Consensus       223 p~~~~~~~~~li~~lL~~dp~~R~  246 (318)
T 1fot_A          223 PPFFNEDVKDLLSRLITRDLSQRL  246 (318)
T ss_dssp             CTTSCHHHHHHHHHHTCSCTTTCT
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcC
Confidence            234567899999999999999999


No 64 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=7.1e-40  Score=297.23  Aligned_cols=239  Identities=22%  Similarity=0.256  Sum_probs=176.3

Q ss_pred             ccccccccCCcceeec-cCCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          110 QSLISFNLTNSKFFFL-HSNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~-~~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ..++.+++|.++.+.. .++.||+|++......   .+.+.+|++++++++|+||+++++++.++...++||||+++ +|
T Consensus        27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l  105 (311)
T 3niz_A           27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DL  105 (311)
T ss_dssp             EEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EH
T ss_pred             hhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CH
Confidence            3445555655555443 2344999998743322   36788999999999999999999999999999999999975 88


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      .+++...     ...+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++........  
T Consensus       106 ~~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~--  175 (311)
T 3niz_A          106 KKVLDEN-----KTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS--  175 (311)
T ss_dssp             HHHHHTC-----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---
T ss_pred             HHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCccc--
Confidence            8888533     2569999999999999999999999   99999999999999999999999999999876543221  


Q ss_pred             cccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccc----------
Q 039471          266 RTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQE----------  326 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  326 (363)
                      .....||..|+|||++         +|+||||+++|||++|+.||..........    .+...+.....          
T Consensus       176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~----~i~~~~~~~~~~~~~~~~~~~  251 (311)
T 3niz_A          176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLP----KIFSILGTPNPREWPQVQELP  251 (311)
T ss_dssp             --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHH----HHHHHHCCCCTTTSGGGTTSH
T ss_pred             ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHH----HHHHHHCCCChHHhhhhhccc
Confidence            2345689999999986         799999999999999999997654433211    11111100000          


Q ss_pred             -----cccccCCC----CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          327 -----LCLDFEED----GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       327 -----~~~~~~~~----~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                           ........    ....+++++.+++.+||++||++|||++|
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  297 (311)
T 3niz_A          252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARD  297 (311)
T ss_dssp             HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHH
Confidence                 00000000    11224567899999999999999999864


No 65 
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=2.3e-40  Score=315.44  Aligned_cols=229  Identities=24%  Similarity=0.365  Sum_probs=176.6

Q ss_pred             ccccccCCcceeeccCC-eeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHHHhh
Q 039471          112 LISFNLTNSKFFFLHSN-EIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKFIF  190 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~  190 (363)
                      ++.+++|.++.....+. .||||+++......++|.+|+.++++++|+||+++++++.+ ...++||||+++|+|.+++.
T Consensus       192 lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~  270 (452)
T 1fmk_A          192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLK  270 (452)
T ss_dssp             EEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHS
T ss_pred             ecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHH
Confidence            45555555555544443 49999998766667899999999999999999999999876 67899999999999999995


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccccccc
Q 039471          191 SKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTAAR  270 (363)
Q Consensus       191 ~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  270 (363)
                      ...    ...+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++........ ......
T Consensus       271 ~~~----~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~  342 (452)
T 1fmk_A          271 GET----GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAK  342 (452)
T ss_dssp             HHH----HTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC---------------
T ss_pred             hcC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCcee-cccCCc
Confidence            432    2458999999999999999999999   99999999999999999999999999999876543221 223345


Q ss_pred             ccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHH
Q 039471          271 GTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIAR  341 (363)
Q Consensus       271 gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (363)
                      ++..|+|||++        +||||||+++|||++ |+.||.......        +...+..+..      ...+..+++
T Consensus       343 ~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--------~~~~i~~~~~------~~~~~~~~~  408 (452)
T 1fmk_A          343 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--------VLDQVERGYR------MPCPPECPE  408 (452)
T ss_dssp             CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--------HHHHHHTTCC------CCCCTTSCH
T ss_pred             ccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCC------CCCCCCCCH
Confidence            77899999987        899999999999999 899986543221        2233332221      122345667


Q ss_pred             HHHHHHHHhccCCCCCCCCCCC
Q 039471          342 KLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       342 ~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .+.+++.+||+.||++|||++|
T Consensus       409 ~l~~li~~cl~~dP~~Rpt~~~  430 (452)
T 1fmk_A          409 SLHDLMCQCWRKEPEERPTFEY  430 (452)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHH
Confidence            8999999999999999999853


No 66 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.7e-40  Score=306.88  Aligned_cols=218  Identities=26%  Similarity=0.442  Sum_probs=175.6

Q ss_pred             eeEEEEcccCCc--ChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCCCCHHHHhhhcCCC----------
Q 039471          129 EIAVKMLEHLKG--NGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKFIFSKTNS----------  195 (363)
Q Consensus       129 ~vAvK~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~----------  195 (363)
                      .||||++.....  ..+++.+|+++++++ +|+||+++++++.+++..++||||+++++|.+++......          
T Consensus       103 ~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  182 (382)
T 3tt0_A          103 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH  182 (382)
T ss_dssp             EEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCS
T ss_pred             EEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhccccccccccccc
Confidence            499999975432  236788999999999 8999999999999999999999999999999999765321          


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccccccccccccc
Q 039471          196 SSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTAARGTSGY  275 (363)
Q Consensus       196 ~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y  275 (363)
                      .....+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++...............+|..|
T Consensus       183 ~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y  259 (382)
T 3tt0_A          183 NPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW  259 (382)
T ss_dssp             SCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGG
T ss_pred             ccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcce
Confidence            123469999999999999999999999   99999999999999999999999999999877654333333445678899


Q ss_pred             cCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHHHHHHH
Q 039471          276 IAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIARKLAIV  346 (363)
Q Consensus       276 ~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  346 (363)
                      +|||++        +||||||+++|||++ |..||.......        +...+..+...      ..+..+++++.++
T Consensus       260 ~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~--------~~~~~~~~~~~------~~~~~~~~~l~~l  325 (382)
T 3tt0_A          260 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--------LFKLLKEGHRM------DKPSNCTNELYMM  325 (382)
T ss_dssp             SCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--------HHHHHHTTCCC------CCCSSCCHHHHHH
T ss_pred             eCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCCC------CCCccCCHHHHHH
Confidence            999987        899999999999999 999986543221        22223222211      1223456779999


Q ss_pred             HHHhccCCCCCCCCCCC
Q 039471          347 AIWCIQWNPTERPSMPM  363 (363)
Q Consensus       347 ~~~cl~~~p~~RPs~~e  363 (363)
                      +.+||+.||++|||++|
T Consensus       326 i~~~l~~dP~~Rps~~e  342 (382)
T 3tt0_A          326 MRDCWHAVPSQRPTFKQ  342 (382)
T ss_dssp             HHHHTCSSGGGSCCHHH
T ss_pred             HHHHcCCChhhCcCHHH
Confidence            99999999999999864


No 67 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=3.2e-40  Score=307.74  Aligned_cols=232  Identities=19%  Similarity=0.275  Sum_probs=181.7

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC-cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK-GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~  186 (363)
                      ..++.+++|.++.+...  ++.||+|++.... .....+.+|+.++++++|+||+++++++.+....++||||+++++|.
T Consensus        57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~  136 (387)
T 1kob_A           57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELF  136 (387)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHH
T ss_pred             EEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHH
Confidence            33455555555554433  3449999987443 23457889999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcC--CCCeeEeccccceeccCCcccc
Q 039471          187 KFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDH--NFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       187 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      +++...     ...+++..+..++.||+.||+|||+   .+|+||||||+|||++.  ++.+||+|||+++........ 
T Consensus       137 ~~l~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~-  207 (387)
T 1kob_A          137 DRIAAE-----DYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV-  207 (387)
T ss_dssp             HHTTCT-----TCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE-
T ss_pred             HHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCcce-
Confidence            998432     2469999999999999999999999   99999999999999974  467999999999987654332 


Q ss_pred             ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          265 SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                        ....||..|+|||++        +|+||||+++|||++|..||.......        ....+....   ........
T Consensus       208 --~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~--------~~~~i~~~~---~~~~~~~~  274 (387)
T 1kob_A          208 --KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE--------TLQNVKRCD---WEFDEDAF  274 (387)
T ss_dssp             --EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--------HHHHHHHCC---CCCCSSTT
T ss_pred             --eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCC---CCCCcccc
Confidence              334689999999988        899999999999999999997654321        112222111   11122233


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+++.+.+++.+||+.||++|||++|
T Consensus       275 ~~~s~~~~~li~~~L~~dP~~Rpt~~e  301 (387)
T 1kob_A          275 SSVSPEAKDFIKNLLQKEPRKRLTVHD  301 (387)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            456778999999999999999999853


No 68 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=7.2e-40  Score=295.42  Aligned_cols=240  Identities=20%  Similarity=0.239  Sum_probs=179.0

Q ss_pred             cccccccccCCcceeeccCCeeEEEEcccCCcChhHHHHHHHHHhc--cCCCceeeeeeeeee----CCceeEEEeccCC
Q 039471          109 FQSLISFNLTNSKFFFLHSNEIAVKMLEHLKGNGQEFINEVATIGR--IHHFHIVRLLGFCSE----GNRRTLIYEFMPN  182 (363)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~----~~~~~lv~e~~~~  182 (363)
                      ...++.+++|.++.....++.||||++...  ....+.+|.+++..  ++|+||+++++++..    ....++||||+++
T Consensus        13 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~   90 (301)
T 3q4u_A           13 LECVGKGRYGEVWRGSWQGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM   90 (301)
T ss_dssp             EEEEEECSSEEEEEEEETTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTT
T ss_pred             EEeeccCCCcEEEEEEECCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccC
Confidence            345667777777666666777999998643  34556667776665  789999999998654    3468999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCCCceecCCCCCceEEcCCCCeeEeccccc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLH--------QGCNQRILHFDIKPHNILLDHNFQPKISDFGLA  254 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a  254 (363)
                      |+|.+++.       ...+++..+..++.|++.||+|||        +   .+|+||||||+|||++.++.+||+|||++
T Consensus        91 g~L~~~l~-------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a  160 (301)
T 3q4u_A           91 GSLYDYLQ-------LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCIADLGLA  160 (301)
T ss_dssp             CBHHHHHT-------TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             CCHHHHHh-------hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence            99999993       246999999999999999999999        7   99999999999999999999999999999


Q ss_pred             eeccCCcccc--ccccccccccccCCccc--------------cCceehhHHHHHHhcC----------CCCCCcchhcc
Q 039471          255 KLCSKDISIV--SRTAARGTSGYIAPELF--------------SRNFCYGMMLLEMVGC----------RKNNDPAVEIQ  308 (363)
Q Consensus       255 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~--------------~Di~slG~il~el~~g----------~~~~~~~~~~~  308 (363)
                      +.........  ......||+.|+|||++              +||||||+++|||++|          ..||.......
T Consensus       161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~  240 (301)
T 3q4u_A          161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND  240 (301)
T ss_dssp             EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence            8766543321  12334689999999975              6999999999999999          77775543322


Q ss_pred             cccchHHHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          309 SQIYFPEWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...  .. .......................++.+.+++.+||+.||++|||++|
T Consensus       241 ~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~  292 (301)
T 3q4u_A          241 PSF--ED-MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALR  292 (301)
T ss_dssp             CCH--HH-HHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             cch--hh-hhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHH
Confidence            211  11 11111111111111111133467889999999999999999999864


No 69 
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=1e-39  Score=311.52  Aligned_cols=226  Identities=22%  Similarity=0.343  Sum_probs=183.0

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccC----CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHL----KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      .++.+++|.++.+...  ++.||||++...    ....+.+.+|+.+++.++|+||+++++++...+..++||||+++++
T Consensus        23 ~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~  102 (476)
T 2y94_A           23 TLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGE  102 (476)
T ss_dssp             EEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEE
T ss_pred             EEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence            3566666666555443  455999999642    2344678999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++.      ....+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++......... 
T Consensus       103 L~~~l~------~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~-  172 (476)
T 2y94_A          103 LFDYIC------KNGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL-  172 (476)
T ss_dssp             HHHHTT------SSSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCB-
T ss_pred             HHHHHH------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccccc-
Confidence            999993      33569999999999999999999999   99999999999999999999999999999887654322 


Q ss_pred             ccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          265 SRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                        ....||+.|+|||++         +|+||||+++|||++|+.||.......        +...+..+..       ..
T Consensus       173 --~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~--------~~~~i~~~~~-------~~  235 (476)
T 2y94_A          173 --RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT--------LFKKICDGIF-------YT  235 (476)
T ss_dssp             --CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH--------HHHHHHTTCC-------CC
T ss_pred             --cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH--------HHHHHhcCCc-------CC
Confidence              345699999999987         799999999999999999997643211        2223322211       12


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +...++.+.+++.+||+.||++|||++|
T Consensus       236 p~~~s~~~~~Li~~~L~~dP~~Rpt~~e  263 (476)
T 2y94_A          236 PQYLNPSVISLLKHMLQVDPMKRATIKD  263 (476)
T ss_dssp             CTTCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             CccCCHHHHHHHHHHcCCCchhCcCHHH
Confidence            2334567999999999999999999854


No 70 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=5.3e-40  Score=305.32  Aligned_cols=233  Identities=22%  Similarity=0.340  Sum_probs=170.2

Q ss_pred             cccccccccCCcceeecc-----CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccC
Q 039471          109 FQSLISFNLTNSKFFFLH-----SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMP  181 (363)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~-----~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  181 (363)
                      ...++.+++|.++.+...     +..||||+++...  ...++|.+|+.++++++|+||+++++++.++...++||||++
T Consensus        50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  129 (373)
T 2qol_A           50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME  129 (373)
T ss_dssp             CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCC
Confidence            344566666666555443     3349999997532  234579999999999999999999999999999999999999


Q ss_pred             CCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCc
Q 039471          182 NGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       182 ~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~  261 (363)
                      +++|.+++...     ...+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus       130 ~~sL~~~l~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  201 (373)
T 2qol_A          130 NGSLDSFLRKH-----DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP  201 (373)
T ss_dssp             TCBHHHHHHTT-----TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             CCcHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence            99999999533     2569999999999999999999999   999999999999999999999999999998775543


Q ss_pred             ccc-ccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhcccccccc
Q 039471          262 SIV-SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDF  331 (363)
Q Consensus       262 ~~~-~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (363)
                      ... ......++..|+|||++        +||||||+++|||++ |+.||.......        +...+..+..     
T Consensus       202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--------~~~~i~~~~~-----  268 (373)
T 2qol_A          202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------VIKAVDEGYR-----  268 (373)
T ss_dssp             ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--------HHHHHHTTEE-----
T ss_pred             ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCC-----
Confidence            211 11223457789999988        899999999999997 999986543221        2222222211     


Q ss_pred             CCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          332 EEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       332 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       ...+..++..+.+++.+||+.||++|||++|
T Consensus       269 -~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~  299 (373)
T 2qol_A          269 -LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ  299 (373)
T ss_dssp             -CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             -CCCCccccHHHHHHHHHHhCcChhhCcCHHH
Confidence             1122345677999999999999999999853


No 71 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=4.1e-40  Score=302.61  Aligned_cols=237  Identities=25%  Similarity=0.331  Sum_probs=183.1

Q ss_pred             ccccccccCCcceeeccC-------CeeEEEEcccCCc--ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEecc
Q 039471          110 QSLISFNLTNSKFFFLHS-------NEIAVKMLEHLKG--NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~-------~~vAvK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      ..++.+++|.++.+...+       ..||||+++....  ..+.+.+|+.++++++|+||+++++++.+++..++||||+
T Consensus        53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~  132 (343)
T 1luf_A           53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYM  132 (343)
T ss_dssp             EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecC
Confidence            345566666665555432       4599999975432  2357899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhhcCCC------------------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcC
Q 039471          181 PNGSLQKFIFSKTNS------------------SSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDH  242 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~------------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~  242 (363)
                      ++++|.+++......                  .....+++..++.++.||+.||.|||+   .+|+||||||+|||++.
T Consensus       133 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~  209 (343)
T 1luf_A          133 AYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGE  209 (343)
T ss_dssp             TTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECG
T ss_pred             CCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEECC
Confidence            999999999764311                  012579999999999999999999999   99999999999999999


Q ss_pred             CCCeeEeccccceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccch
Q 039471          243 NFQPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYF  313 (363)
Q Consensus       243 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~  313 (363)
                      ++.+||+|||+++...............+|..|+|||++        +|+||||+++|||++ |+.||.......     
T Consensus       210 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----  284 (343)
T 1luf_A          210 NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE-----  284 (343)
T ss_dssp             GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----
T ss_pred             CCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHH-----
Confidence            999999999999876544332223445678999999987        899999999999999 999987543221     


Q ss_pred             HHHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          314 PEWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                         +...+..+...      ..+..++..+.+++.+||+.||++|||++|
T Consensus       285 ---~~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~  325 (343)
T 1luf_A          285 ---VIYYVRDGNIL------ACPENCPLELYNLMRLCWSKLPADRPSFCS  325 (343)
T ss_dssp             ---HHHHHHTTCCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ---HHHHHhCCCcC------CCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence               22222222211      123345678999999999999999999753


No 72 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=1.3e-39  Score=300.15  Aligned_cols=226  Identities=19%  Similarity=0.212  Sum_probs=181.0

Q ss_pred             ccccccccCCcceeeccC--CeeEEEEcccC----CcChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCC
Q 039471          110 QSLISFNLTNSKFFFLHS--NEIAVKMLEHL----KGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~--~~vAvK~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      ..++.+++|.+..+....  +.||||+++..    ....+.+.+|..++..+ +|+||+++++++.+....++||||+++
T Consensus        26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~g  105 (353)
T 2i0e_A           26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG  105 (353)
T ss_dssp             EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCC
Confidence            345566666655555443  33999999742    34556788999999988 799999999999999999999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      |+|.+++...      ..+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus       106 g~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~  176 (353)
T 2i0e_A          106 GDLMYHIQQV------GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV  176 (353)
T ss_dssp             CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred             CcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc
Confidence            9999999543      459999999999999999999999   9999999999999999999999999999986433221


Q ss_pred             ccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCC
Q 039471          263 IVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEED  334 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                        ......||+.|+|||++        +|+||||+++|||++|+.||.......        +...+..+..       .
T Consensus       177 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~--------~~~~i~~~~~-------~  239 (353)
T 2i0e_A          177 --TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--------LFQSIMEHNV-------A  239 (353)
T ss_dssp             --CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCC-------C
T ss_pred             --ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH--------HHHHHHhCCC-------C
Confidence              12455699999999988        799999999999999999997643321        2333322211       1


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSM  361 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~  361 (363)
                      .+...++++.+++.+||+.||++||++
T Consensus       240 ~p~~~s~~~~~li~~lL~~dP~~R~~~  266 (353)
T 2i0e_A          240 YPKSMSKEAVAICKGLMTKHPGKRLGC  266 (353)
T ss_dssp             CCTTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred             CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            233466789999999999999999975


No 73 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=4.4e-40  Score=296.23  Aligned_cols=230  Identities=23%  Similarity=0.293  Sum_probs=172.9

Q ss_pred             cccccccCCcceeec--cCCeeEEEEcccCCcC----hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          111 SLISFNLTNSKFFFL--HSNEIAVKMLEHLKGN----GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      .++.+++|.++....  .+..||+|++......    .+.+.+|+.++++++|+||+++++++.+++..++||||+++++
T Consensus        18 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~   97 (294)
T 4eqm_A           18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPT   97 (294)
T ss_dssp             EEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred             EEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCC
Confidence            345555555544432  2445999998543322    2578899999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++...      ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++........ 
T Consensus        98 L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-  167 (294)
T 4eqm_A           98 LSEYIESH------GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-  167 (294)
T ss_dssp             HHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred             HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc-
Confidence            99999543      468999999999999999999999   99999999999999999999999999999876543322 


Q ss_pred             ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          265 SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                      ......||+.|+|||++        +|+||||+++|||++|+.||........       ....+...   .........
T Consensus       168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-------~~~~~~~~---~~~~~~~~~  237 (294)
T 4eqm_A          168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI-------AIKHIQDS---VPNVTTDVR  237 (294)
T ss_dssp             -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH-------HHHHHSSC---CCCHHHHSC
T ss_pred             ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-------HHHHhhcc---CCCcchhcc
Confidence            12345689999999987        7999999999999999999976543221       11111111   011111122


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPS  360 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs  360 (363)
                      ..+++.+.+++.+||+.||++||+
T Consensus       238 ~~~~~~l~~li~~~l~~dp~~R~~  261 (294)
T 4eqm_A          238 KDIPQSLSNVILRATEKDKANRYK  261 (294)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCS
T ss_pred             cCCCHHHHHHHHHHhcCCHhHccc
Confidence            345678999999999999999994


No 74 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=2.7e-40  Score=293.85  Aligned_cols=227  Identities=25%  Similarity=0.352  Sum_probs=171.7

Q ss_pred             ccccccccCCcceeeccCCeeEEEEcccCC-----cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          110 QSLISFNLTNSKFFFLHSNEIAVKMLEHLK-----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ..++.+++|.++.+...++.||||++....     ...+.+.+|++++++++|+||+++++++.+++..++||||+++++
T Consensus        13 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   92 (271)
T 3dtc_A           13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGP   92 (271)
T ss_dssp             EEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEE
T ss_pred             eeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCC
Confidence            445667777777766667779999986432     234678999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC---ceecCCCCCceEEcC--------CCCeeEecccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQR---ILHFDIKPHNILLDH--------NFQPKISDFGL  253 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~---i~H~dikp~Nill~~--------~~~~kl~Dfg~  253 (363)
                      |.+++.       ...+++..++.++.|++.||+|||+   .+   ++||||||+||+++.        ++.+||+|||+
T Consensus        93 L~~~~~-------~~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~  162 (271)
T 3dtc_A           93 LNRVLS-------GKRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL  162 (271)
T ss_dssp             HHHHHT-------SSCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred             HHHHhh-------cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence            999983       2568999999999999999999999   77   999999999999986        67899999999


Q ss_pred             ceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcc
Q 039471          254 AKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQ  325 (363)
Q Consensus       254 a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (363)
                      +........    ....||..|+|||++        +|+||||+++|||++|+.||........        ........
T Consensus       163 ~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--------~~~~~~~~  230 (271)
T 3dtc_A          163 AREWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV--------AYGVAMNK  230 (271)
T ss_dssp             -----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH--------HHHHHTSC
T ss_pred             ccccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--------HHhhhcCC
Confidence            987654432    234689999999987        7999999999999999999976443211        11111111


Q ss_pred             ccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          326 ELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       326 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                           .....+...++.+.+++.+||+.||++|||++|
T Consensus       231 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  263 (271)
T 3dtc_A          231 -----LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTN  263 (271)
T ss_dssp             -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             -----CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHH
Confidence                 111223445678999999999999999999864


No 75 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=1.5e-39  Score=299.12  Aligned_cols=234  Identities=21%  Similarity=0.258  Sum_probs=179.4

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCc----ChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKG----NGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      ..++.+++|.+..+...  ++.||||++.....    ..+.+.+|..++.++ +||||+++++++.+....++||||+++
T Consensus        15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~g   94 (345)
T 3a8x_A           15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   94 (345)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCC
Confidence            34455556555555443  34499999975432    224578899999987 899999999999999999999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      |+|.+++...      ..+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus        95 g~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~  165 (345)
T 3a8x_A           95 GDLMFHMQRQ------RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD  165 (345)
T ss_dssp             CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred             CcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence            9999999543      469999999999999999999999   9999999999999999999999999999986433221


Q ss_pred             ccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccc-cchHHHHHHHhhhccccccccCC
Q 039471          263 IVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQ-IYFPEWIYNRMRLGQELCLDFEE  333 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  333 (363)
                        ......||+.|+|||++        +|+|||||++|||++|+.||......... ......+...+....       .
T Consensus       166 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~-------~  236 (345)
T 3a8x_A          166 --TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-------I  236 (345)
T ss_dssp             --CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-------C
T ss_pred             --cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-------C
Confidence              12445699999999987        79999999999999999999653221110 011122333332221       1


Q ss_pred             CCcHHHHHHHHHHHHHhccCCCCCCCCC
Q 039471          334 DGDEGIARKLAIVAIWCIQWNPTERPSM  361 (363)
Q Consensus       334 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~  361 (363)
                      ..+...+..+.+++.+||+.||++|||+
T Consensus       237 ~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          237 RIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence            1233456789999999999999999996


No 76 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=1.1e-39  Score=305.22  Aligned_cols=245  Identities=14%  Similarity=0.110  Sum_probs=176.6

Q ss_pred             cccc--ccCCcceeecc--CCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          112 LISF--NLTNSKFFFLH--SNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       112 ~~~~--~~~~~~~~~~~--~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ++.+  ++|.++.+...  +..||||++......   .+.+.+|+.++++++|+||+++++++.+++..++||||+++++
T Consensus        33 lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~  112 (389)
T 3gni_B           33 IGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGS  112 (389)
T ss_dssp             EEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred             ccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCC
Confidence            3444  55555555443  445999999754322   3567889999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc-
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI-  263 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-  263 (363)
                      |.+++.....    ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||.+......... 
T Consensus       113 L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~  185 (389)
T 3gni_B          113 AKDLICTHFM----DGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQ  185 (389)
T ss_dssp             HHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEEC
T ss_pred             HHHHHhhhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccc
Confidence            9999965432    569999999999999999999999   99999999999999999999999999998765332111 


Q ss_pred             ----cccccccccccccCCccc----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHh--------
Q 039471          264 ----VSRTAARGTSGYIAPELF----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRM--------  321 (363)
Q Consensus       264 ----~~~~~~~gt~~y~aPE~~----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--------  321 (363)
                          .......||..|+|||++          +|||||||++|||++|+.||...................+        
T Consensus       186 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (389)
T 3gni_B          186 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPA  265 (389)
T ss_dssp             SCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------------
T ss_pred             cccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccccc
Confidence                111234688999999987          6999999999999999999976433221100000000000        


Q ss_pred             --------------------hhcc---ccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          322 --------------------RLGQ---ELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       322 --------------------~~~~---~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                                          ....   .............+++.+.+++.+||++||++|||++|
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e  330 (389)
T 3gni_B          266 EELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSAST  330 (389)
T ss_dssp             ----------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred             ccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHH
Confidence                                0000   00000011123445678999999999999999999754


No 77 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=9.1e-40  Score=293.76  Aligned_cols=240  Identities=20%  Similarity=0.262  Sum_probs=177.9

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ..++.+++|.++.+...  ++.||||++......   .+.+.+|+.++++++|+||+++++++.+++..++||||+++ +
T Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~   86 (292)
T 3o0g_A            8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-D   86 (292)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-E
T ss_pred             eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-C
Confidence            34556666666555443  344999999743322   36788999999999999999999999999999999999975 6


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++...     ...+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++........ 
T Consensus        87 l~~~~~~~-----~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-  157 (292)
T 3o0g_A           87 LKKYFDSC-----NGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC-  157 (292)
T ss_dssp             HHHHHHHT-----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC-
T ss_pred             HHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc-
Confidence            66666432     2569999999999999999999999   99999999999999999999999999999876543221 


Q ss_pred             ccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcccc--------
Q 039471          265 SRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQEL--------  327 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  327 (363)
                       .....||..|+|||++         +|+||||+++|||++|..|+.........   ...+.+........        
T Consensus       158 -~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~  233 (292)
T 3o0g_A          158 -YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ---LKRIFRLLGTPTEEQWPSMTKL  233 (292)
T ss_dssp             -CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHH---HHHHHHHHCCCCTTTCTTGGGS
T ss_pred             -ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHH---HHHHHHHhCCCChhhhhhhccc
Confidence             2445689999999987         79999999999999988886543322211   01111111000000        


Q ss_pred             ----------ccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          328 ----------CLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       328 ----------~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                                ............+..+.+++.+||+.||++|||++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  279 (292)
T 3o0g_A          234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEE  279 (292)
T ss_dssp             TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHH
Confidence                      000011122345678899999999999999999864


No 78 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=7.8e-40  Score=296.96  Aligned_cols=235  Identities=24%  Similarity=0.404  Sum_probs=183.0

Q ss_pred             ccccccCCcceeec-------cCCeeEEEEcccCCc--ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCC
Q 039471          112 LISFNLTNSKFFFL-------HSNEIAVKMLEHLKG--NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       112 ~~~~~~~~~~~~~~-------~~~~vAvK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      ++.+++|.++.+..       .+..||||++.....  ..+.+.+|++++++++|+||+++++++.+++..++||||+++
T Consensus        31 lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~  110 (314)
T 2ivs_A           31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY  110 (314)
T ss_dssp             EEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             ecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCC
Confidence            45555555544432       114499999974332  236788999999999999999999999999999999999999


Q ss_pred             CCHHHHhhhcCCC------------------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCC
Q 039471          183 GSLQKFIFSKTNS------------------SSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF  244 (363)
Q Consensus       183 ~sL~~~l~~~~~~------------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~  244 (363)
                      ++|.+++......                  .....+++..++.++.|++.||+|||+   .+|+||||||+||+++.++
T Consensus       111 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp~NIli~~~~  187 (314)
T 2ivs_A          111 GSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGR  187 (314)
T ss_dssp             CBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTT
T ss_pred             CCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccchheEEEcCCC
Confidence            9999999764321                  012458999999999999999999999   9999999999999999999


Q ss_pred             CeeEeccccceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHH
Q 039471          245 QPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPE  315 (363)
Q Consensus       245 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~  315 (363)
                      .+||+|||+++...............++..|+|||++        +|+||||+++|||++ |+.||.......       
T Consensus       188 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-------  260 (314)
T 2ivs_A          188 KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER-------  260 (314)
T ss_dssp             EEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-------
T ss_pred             CEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------
Confidence            9999999999887655443333455678899999987        899999999999999 999987644321       


Q ss_pred             HHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          316 WIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       +...+..+..      ...+..+++.+.+++.+||+.||++|||++|
T Consensus       261 -~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  301 (314)
T 2ivs_A          261 -LFNLLKTGHR------MERPDNCSEEMYRLMLQCWKQEPDKRPVFAD  301 (314)
T ss_dssp             -HHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             -HHHHhhcCCc------CCCCccCCHHHHHHHHHHccCChhhCcCHHH
Confidence             2222222211      1223455678999999999999999999854


No 79 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=4.1e-40  Score=303.51  Aligned_cols=230  Identities=20%  Similarity=0.255  Sum_probs=165.9

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHHH
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKF  188 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~  188 (363)
                      .++.+++|.++.+...  ++.||||++.... ..+.+.+|+.++++++|+||+++++++.++...++||||+++++|.++
T Consensus        60 ~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~  138 (349)
T 2w4o_A           60 ELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDR  138 (349)
T ss_dssp             EEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred             EEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHH
Confidence            3455666665555544  3349999997543 446788999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcC---CCCeeEeccccceeccCCccccc
Q 039471          189 IFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDH---NFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       189 l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      +..      ...+++..+..++.|++.||+|||+   .+|+||||||+|||++.   ++.+||+|||+++........  
T Consensus       139 l~~------~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~--  207 (349)
T 2w4o_A          139 IVE------KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM--  207 (349)
T ss_dssp             HTT------CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC-------------
T ss_pred             HHh------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCccccc--
Confidence            942      3568999999999999999999999   99999999999999975   889999999999876543221  


Q ss_pred             cccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcH
Q 039471          266 RTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDE  337 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (363)
                       ....||+.|+|||++        +|+||||+++|||++|+.||.......       .....+.....   ........
T Consensus       208 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-------~~~~~i~~~~~---~~~~~~~~  276 (349)
T 2w4o_A          208 -KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ-------FMFRRILNCEY---YFISPWWD  276 (349)
T ss_dssp             ------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH-------HHHHHHHTTCC---CCCTTTTT
T ss_pred             -ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH-------HHHHHHHhCCC---ccCCchhh
Confidence             345689999999987        899999999999999999997543321       12222222211   11112233


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          338 GIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       338 ~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+..+.+++.+||+.||++|||++|
T Consensus       277 ~~~~~~~~li~~~L~~dP~~Rpt~~e  302 (349)
T 2w4o_A          277 EVSLNAKDLVRKLIVLDPKKRLTTFQ  302 (349)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             hCCHHHHHHHHHHccCChhhCcCHHH
Confidence            45678999999999999999999753


No 80 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=2.7e-40  Score=305.81  Aligned_cols=236  Identities=27%  Similarity=0.378  Sum_probs=179.3

Q ss_pred             ccccccCCcceeecc-------CCeeEEEEcccCCc--ChhHHHHHHHHHhcc-CCCceeeeeeeeeeCC-ceeEEEecc
Q 039471          112 LISFNLTNSKFFFLH-------SNEIAVKMLEHLKG--NGQEFINEVATIGRI-HHFHIVRLLGFCSEGN-RRTLIYEFM  180 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~-------~~~vAvK~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~-~~~lv~e~~  180 (363)
                      ++.+++|.++.+...       ++.||||+++....  ..+.+.+|++++.++ +|+||+++++++.+.+ ..++||||+
T Consensus        30 lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~  109 (359)
T 3vhe_A           30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC  109 (359)
T ss_dssp             EEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECC
T ss_pred             ecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEec
Confidence            445555555444311       13499999975432  235789999999999 7999999999987754 489999999


Q ss_pred             CCCCHHHHhhhcCCCC------------------------------------------------------------CCCC
Q 039471          181 PNGSLQKFIFSKTNSS------------------------------------------------------------SHRQ  200 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~------------------------------------------------------------~~~~  200 (363)
                      ++|+|.+++.......                                                            ....
T Consensus       110 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (359)
T 3vhe_A          110 KFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDF  189 (359)
T ss_dssp             TTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTTTTC
T ss_pred             CCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccc
Confidence            9999999997543210                                                            0123


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccccccccccccccCCcc
Q 039471          201 LSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPEL  280 (363)
Q Consensus       201 l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~  280 (363)
                      +++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++...............||..|+|||+
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~  266 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET  266 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhh
Confidence            8999999999999999999999   9999999999999999999999999999987755444333455668899999998


Q ss_pred             c--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhc
Q 039471          281 F--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCI  351 (363)
Q Consensus       281 ~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  351 (363)
                      +        +||||||+++|||++ |+.||........       ....+..+..      ...+...++.+.+++.+||
T Consensus       267 ~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-------~~~~~~~~~~------~~~~~~~~~~l~~li~~~l  333 (359)
T 3vhe_A          267 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-------FCRRLKEGTR------MRAPDYTTPEMYQTMLDCW  333 (359)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-------HHHHHHHTCC------CCCCTTCCHHHHHHHHHHT
T ss_pred             hcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-------HHHHHHcCCC------CCCCCCCCHHHHHHHHHHc
Confidence            7        899999999999998 9999876432211       2222222211      1223345677999999999


Q ss_pred             cCCCCCCCCCCC
Q 039471          352 QWNPTERPSMPM  363 (363)
Q Consensus       352 ~~~p~~RPs~~e  363 (363)
                      +.||++|||++|
T Consensus       334 ~~dP~~Rps~~e  345 (359)
T 3vhe_A          334 HGEPSQRPTFSE  345 (359)
T ss_dssp             CSSGGGSCCHHH
T ss_pred             cCChhhCCCHHH
Confidence            999999999864


No 81 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=4.2e-40  Score=295.16  Aligned_cols=232  Identities=27%  Similarity=0.393  Sum_probs=186.8

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQK  187 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~  187 (363)
                      ..++.+++|.++.+...  +..||+|++.......+.+.+|+.++++++|+||+++++++.++...++||||+++++|.+
T Consensus        19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~   98 (288)
T 3kfa_A           19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD   98 (288)
T ss_dssp             EESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHH
T ss_pred             eecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHH
Confidence            34566666666665544  3449999998766667889999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccccc
Q 039471          188 FIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRT  267 (363)
Q Consensus       188 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~  267 (363)
                      ++.....    ..+++..++.++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++......... ...
T Consensus        99 ~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-~~~  170 (288)
T 3kfa_A           99 YLRECNR----QEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHA  170 (288)
T ss_dssp             HHHHCCT----TTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE-EET
T ss_pred             HHHhccc----CCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccCCccc-ccc
Confidence            9965432    569999999999999999999999   99999999999999999999999999999876654322 223


Q ss_pred             cccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHH
Q 039471          268 AARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEG  338 (363)
Q Consensus       268 ~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (363)
                      ...+|..|+|||++        +|+||||+++|+|++ |..||.......        +...+....      ....+..
T Consensus       171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--------~~~~~~~~~------~~~~~~~  236 (288)
T 3kfa_A          171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------VYELLEKDY------RMERPEG  236 (288)
T ss_dssp             TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--------HHHHHHTTC------CCCCCTT
T ss_pred             CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHhccC------CCCCCCC
Confidence            44578889999987        799999999999999 888887643322        122222111      1122344


Q ss_pred             HHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          339 IARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       339 ~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +++.+.+++.+||+.||++|||++|
T Consensus       237 ~~~~l~~li~~~l~~dp~~Rps~~~  261 (288)
T 3kfa_A          237 CPEKVYELMRACWQWNPSDRPSFAE  261 (288)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCHHHHHHHHHHhCCChhhCcCHHH
Confidence            5678999999999999999999864


No 82 
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=1.7e-39  Score=313.51  Aligned_cols=235  Identities=22%  Similarity=0.244  Sum_probs=186.3

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccC----CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHL----KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ..++.+++|.++.+...  ++.||||++...    ....+.+.+|+.++++++|+||+++++++.+....++||||++||
T Consensus       191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg  270 (543)
T 3c4z_A          191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG  270 (543)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence            34566666666655543  445999999632    234567899999999999999999999999999999999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++.....  ....+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++........
T Consensus       271 ~L~~~l~~~~~--~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~  345 (543)
T 3c4z_A          271 DIRYHIYNVDE--DNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK  345 (543)
T ss_dssp             BHHHHHHTSST--TSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred             CHHHHHHHhhc--ccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence            99999865431  23579999999999999999999999   99999999999999999999999999999887654322


Q ss_pred             cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          264 VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                        .....||+.|+|||++        +|+|||||++|||++|+.||.........    ..+...+....       ...
T Consensus       346 --~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~----~~~~~~i~~~~-------~~~  412 (543)
T 3c4z_A          346 --TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN----KELKQRVLEQA-------VTY  412 (543)
T ss_dssp             --BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCH----HHHHHHHHHCC-------CCC
T ss_pred             --cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhH----HHHHHHHhhcc-------cCC
Confidence              1345799999999988        79999999999999999999865432211    11222222111       122


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERPSMP  362 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RPs~~  362 (363)
                      +..+++.+.+++.+||+.||++||++.
T Consensus       413 p~~~s~~~~~li~~lL~~dP~~R~~~~  439 (543)
T 3c4z_A          413 PDKFSPASKDFCEALLQKDPEKRLGFR  439 (543)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred             CcccCHHHHHHHHHhccCCHhHCCCCc
Confidence            345677899999999999999999874


No 83 
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=7.4e-40  Score=293.39  Aligned_cols=234  Identities=20%  Similarity=0.258  Sum_probs=176.4

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ..++.+++|.++.+...  +..||+|++....  ...+.+.+|++++++++|+||+++++++.+....++||||+++++|
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L  107 (285)
T 3is5_A           28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGEL  107 (285)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBH
T ss_pred             ceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcH
Confidence            34455666655554433  4459999986543  3457899999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEE---cCCCCeeEeccccceeccCCcc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL---DHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill---~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      .+++.....  ....+++..++.++.|++.||+|||+   .+|+||||||+||++   +.++.+||+|||++........
T Consensus       108 ~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~  182 (285)
T 3is5_A          108 LERIVSAQA--RGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH  182 (285)
T ss_dssp             HHHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------
T ss_pred             HHHHHhhhh--cccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCccc
Confidence            999855321  22569999999999999999999999   999999999999999   4567899999999987654432


Q ss_pred             ccccccccccccccCCccc-------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          263 IVSRTAARGTSGYIAPELF-------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~-------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                      .   ....||..|+|||++       +|+||||+++|||++|+.||.......        ............    ...
T Consensus       183 ~---~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--------~~~~~~~~~~~~----~~~  247 (285)
T 3is5_A          183 S---TNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--------VQQKATYKEPNY----AVE  247 (285)
T ss_dssp             -------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCCC----CC-
T ss_pred             C---cCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--------HHhhhccCCccc----ccc
Confidence            2   345689999999987       899999999999999999997643221        111111111110    011


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ....++.+.+++.+||+.||++|||++|
T Consensus       248 ~~~~~~~~~~li~~~L~~dP~~Rps~~e  275 (285)
T 3is5_A          248 CRPLTPQAVDLLKQMLTKDPERRPSAAQ  275 (285)
T ss_dssp             -CCCCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred             cCcCCHHHHHHHHHHccCChhhCcCHHH
Confidence            1124567889999999999999999864


No 84 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.1e-39  Score=290.63  Aligned_cols=227  Identities=22%  Similarity=0.355  Sum_probs=165.8

Q ss_pred             cccccccccCCcceeec--cCCeeEEEEcccC----CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCC
Q 039471          109 FQSLISFNLTNSKFFFL--HSNEIAVKMLEHL----KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       109 ~~~~~~~~~~~~~~~~~--~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      ...++.+++|.++.+..  .++.||+|++...    ....+.+.+|+.++++++|+||+++++++.+.+..++||||+ +
T Consensus        18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~   96 (275)
T 2eue_A           18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G   96 (275)
T ss_dssp             CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-C
T ss_pred             EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-C
Confidence            34455666666555533  3445999998643    233467889999999999999999999999999999999999 6


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      ++|.+++..      ...+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........
T Consensus        97 ~~l~~~~~~------~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  167 (275)
T 2eue_A           97 NELFDYIVQ------RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF  167 (275)
T ss_dssp             EEHHHHHHT------SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred             CcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence            788888843      2569999999999999999999999   9999999999999999999999999999987655432


Q ss_pred             ccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCC
Q 039471          263 IVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEE  333 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (363)
                      .   ....||..|+|||++         +|+||||+++|||++|+.||.......        ....+..+..       
T Consensus       168 ~---~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------~~~~~~~~~~-------  229 (275)
T 2eue_A          168 L---KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV--------LFKNISNGVY-------  229 (275)
T ss_dssp             ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHTCC-------
T ss_pred             c---cCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCCC-------
Confidence            2   344589999999987         799999999999999999997643221        2222222211       


Q ss_pred             CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          334 DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       334 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+...++.+.+++.+||+.||++|||++|
T Consensus       230 ~~~~~~~~~~~~li~~~l~~dP~~Rps~~e  259 (275)
T 2eue_A          230 TLPKFLSPGAAGLIKRMLIVNPLNRISIHE  259 (275)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CCCccCCHHHHHHHHHHhhcCHhHCCCHHH
Confidence            123345677999999999999999999864


No 85 
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=3.3e-39  Score=287.44  Aligned_cols=233  Identities=24%  Similarity=0.296  Sum_probs=182.8

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ..++.+++|.++.+...  ++.||||++....  ...+.+.+|+.++++++|+||+++++++.+++..++||||+++++|
T Consensus        13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   92 (276)
T 2yex_A           13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL   92 (276)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEG
T ss_pred             EEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcH
Confidence            34555666665555433  4559999986433  2346889999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      .+++.      ....+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||.+...........
T Consensus        93 ~~~l~------~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  163 (276)
T 2yex_A           93 FDRIE------PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  163 (276)
T ss_dssp             GGGSB------TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             HHHHh------hccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence            99983      23568999999999999999999999   9999999999999999999999999999987654432222


Q ss_pred             cccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          266 RTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                      .....|+..|+|||++         +|+||||+++|||++|+.||........       ....+.....     .....
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-------~~~~~~~~~~-----~~~~~  231 (276)
T 2yex_A          164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-------EYSDWKEKKT-----YLNPW  231 (276)
T ss_dssp             BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-------HHHHHHTTCT-----TSTTG
T ss_pred             ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-------HHHHhhhccc-----ccCch
Confidence            3455689999999987         7999999999999999999976543221       1111111111     01122


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...+..+.+++.+||+.||++|||++|
T Consensus       232 ~~~~~~~~~li~~~l~~~p~~Rps~~~  258 (276)
T 2yex_A          232 KKIDSAPLALLHKILVENPSARITIPD  258 (276)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             hhcCHHHHHHHHHHCCCCchhCCCHHH
Confidence            345678999999999999999999853


No 86 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=1.7e-39  Score=296.90  Aligned_cols=232  Identities=20%  Similarity=0.214  Sum_probs=175.4

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCC--------------
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGN--------------  171 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--------------  171 (363)
                      ..++.+++|.++.+...  +..||||++....  ...+.+.+|++++++++||||+++++++.+..              
T Consensus        12 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~   91 (332)
T 3qd2_B           12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLK   91 (332)
T ss_dssp             EEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC----
T ss_pred             eEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhc
Confidence            34566666666655543  4459999987433  23468999999999999999999999986543              


Q ss_pred             -------------------------------------------ceeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHH
Q 039471          172 -------------------------------------------RRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRK  208 (363)
Q Consensus       172 -------------------------------------------~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~  208 (363)
                                                                 ..++||||+++++|.+++.....   ....++..++.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~  168 (332)
T 3qd2_B           92 DESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS---LEDREHGVCLH  168 (332)
T ss_dssp             ----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS---GGGSCHHHHHH
T ss_pred             cccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC---ccchhhHHHHH
Confidence                                                       37999999999999999965432   24567788999


Q ss_pred             HHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc----------cccccccccccccCC
Q 039471          209 IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI----------VSRTAARGTSGYIAP  278 (363)
Q Consensus       209 i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~~~gt~~y~aP  278 (363)
                      ++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++........          .......||+.|+||
T Consensus       169 i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  245 (332)
T 3qd2_B          169 IFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP  245 (332)
T ss_dssp             HHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred             HHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence            99999999999999   99999999999999999999999999999887654321          112345699999999


Q ss_pred             ccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHh
Q 039471          279 ELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWC  350 (363)
Q Consensus       279 E~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c  350 (363)
                      |++        +|+||||+++|||++|..|+.....          ........      ..+......++.+.+++.+|
T Consensus       246 E~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~----------~~~~~~~~------~~~~~~~~~~~~~~~li~~~  309 (332)
T 3qd2_B          246 EQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR----------IITDVRNL------KFPLLFTQKYPQEHMMVQDM  309 (332)
T ss_dssp             HHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH----------HHHHHHTT------CCCHHHHHHCHHHHHHHHHH
T ss_pred             HHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH----------HHHHhhcc------CCCcccccCChhHHHHHHHH
Confidence            987        7999999999999998766432211          11111111      11112345567789999999


Q ss_pred             ccCCCCCCCCCCC
Q 039471          351 IQWNPTERPSMPM  363 (363)
Q Consensus       351 l~~~p~~RPs~~e  363 (363)
                      |+.||++|||++|
T Consensus       310 l~~~p~~Rps~~~  322 (332)
T 3qd2_B          310 LSPSPTERPEATD  322 (332)
T ss_dssp             HCSSGGGSCCHHH
T ss_pred             ccCCCCcCCCHHH
Confidence            9999999999864


No 87 
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=7.4e-40  Score=290.69  Aligned_cols=228  Identities=20%  Similarity=0.312  Sum_probs=181.9

Q ss_pred             cccccccccCCcceeeccCCeeEEEEcccCCc---ChhHHHHHHHHHhccCCCceeeeeeeeeeC--CceeEEEeccCCC
Q 039471          109 FQSLISFNLTNSKFFFLHSNEIAVKMLEHLKG---NGQEFINEVATIGRIHHFHIVRLLGFCSEG--NRRTLIYEFMPNG  183 (363)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~  183 (363)
                      ...++.+++|.++.+...++.||||++.....   ..+.|.+|+.++++++|+||+++++++.+.  ...++||||++++
T Consensus        15 ~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~   94 (271)
T 3kmu_A           15 LTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYG   94 (271)
T ss_dssp             EEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTC
T ss_pred             HHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCC
Confidence            34566777777777777777799999975432   235789999999999999999999999876  7889999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--ceecCCCCCceEEcCCCCeeEeccccceeccCCc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQR--ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~  261 (363)
                      +|.+++....    ...+++..++.++.|++.||+|||+   .+  ++||||||+||+++.++.++|.|||++.....  
T Consensus        95 ~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~--  165 (271)
T 3kmu_A           95 SLYNVLHEGT----NFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS--  165 (271)
T ss_dssp             BHHHHHHSCS----SCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--
T ss_pred             cHHHHHhhcc----cCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeecc--
Confidence            9999996432    2469999999999999999999999   88  99999999999999999999999988654322  


Q ss_pred             cccccccccccccccCCccc-----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccc
Q 039471          262 SIVSRTAARGTSGYIAPELF-----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLD  330 (363)
Q Consensus       262 ~~~~~~~~~gt~~y~aPE~~-----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (363)
                           ....||+.|+|||++           +|+||||+++|||++|+.||........       .......+      
T Consensus       166 -----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-------~~~~~~~~------  227 (271)
T 3kmu_A          166 -----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-------GMKVALEG------  227 (271)
T ss_dssp             -----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-------HHHHHHSC------
T ss_pred             -----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-------HHHHHhcC------
Confidence                 234589999999987           7999999999999999999976433221       11111111      


Q ss_pred             cCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          331 FEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       331 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .....+...++.+.+++.+||+.||++|||++|
T Consensus       228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  260 (271)
T 3kmu_A          228 LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDM  260 (271)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            111233455678999999999999999999853


No 88 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.7e-40  Score=301.03  Aligned_cols=237  Identities=28%  Similarity=0.398  Sum_probs=180.5

Q ss_pred             cccccccCCcceeec-------cCCeeEEEEcccC--CcChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEecc
Q 039471          111 SLISFNLTNSKFFFL-------HSNEIAVKMLEHL--KGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~-------~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      .++.+++|.++.+..       .+..||||++...  ....+.+.+|+.+++++ +|+||+++++++..++..++||||+
T Consensus        52 ~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~  131 (344)
T 1rjb_A           52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYC  131 (344)
T ss_dssp             EEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             eecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecC
Confidence            345555555544432       1224999999743  23457899999999999 8999999999999999999999999


Q ss_pred             CCCCHHHHhhhcCCC-----------------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCC
Q 039471          181 PNGSLQKFIFSKTNS-----------------SSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHN  243 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~-----------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~  243 (363)
                      ++|+|.+++......                 .....+++..++.++.||+.||+|||+   .+|+||||||+|||++.+
T Consensus       132 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~  208 (344)
T 1rjb_A          132 CYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHG  208 (344)
T ss_dssp             TTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCSGGGEEEETT
T ss_pred             CCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEEcCC
Confidence            999999999654321                 011348999999999999999999999   999999999999999999


Q ss_pred             CCeeEeccccceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchH
Q 039471          244 FQPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFP  314 (363)
Q Consensus       244 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~  314 (363)
                      +.+||+|||++................+|..|+|||++        +|+||||+++|||++ |..||........     
T Consensus       209 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-----  283 (344)
T 1rjb_A          209 KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN-----  283 (344)
T ss_dssp             TEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-----
T ss_pred             CcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH-----
Confidence            99999999999877655443333455678899999987        899999999999998 9999876532211     


Q ss_pred             HHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          315 EWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                        ....+..+.      ....+...++.+.+++.+||+.||++|||++|
T Consensus       284 --~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  324 (344)
T 1rjb_A          284 --FYKLIQNGF------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPN  324 (344)
T ss_dssp             --HHHHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             --HHHHHhcCC------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence              222222111      11223345678999999999999999999853


No 89 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1e-39  Score=289.32  Aligned_cols=231  Identities=21%  Similarity=0.378  Sum_probs=183.7

Q ss_pred             ccccccccCCcceeecc-CCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHHH
Q 039471          110 QSLISFNLTNSKFFFLH-SNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKF  188 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~-~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~  188 (363)
                      ..++.+++|.++.+... ++.||+|++.......+.+.+|++++++++|+||+++++++.+++..++||||+++++|.++
T Consensus        14 ~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   93 (267)
T 3t9t_A           14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDY   93 (267)
T ss_dssp             EEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHH
T ss_pred             eEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHH
Confidence            34455566655555443 34599999987776778999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccccc
Q 039471          189 IFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTA  268 (363)
Q Consensus       189 l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  268 (363)
                      +....     ..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++........ .....
T Consensus        94 ~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~  164 (267)
T 3t9t_A           94 LRTQR-----GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTG  164 (267)
T ss_dssp             HHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH-HSTTS
T ss_pred             HhhCc-----ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccccc-ccccc
Confidence            96432     468999999999999999999999   9999999999999999999999999999987644321 12234


Q ss_pred             ccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHH
Q 039471          269 ARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGI  339 (363)
Q Consensus       269 ~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (363)
                      ..++..|+|||++        +|+||||+++|||++ |+.||.......        ....+..+..      ...+...
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~i~~~~~------~~~~~~~  230 (267)
T 3t9t_A          165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--------VVEDISTGFR------LYKPRLA  230 (267)
T ss_dssp             TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTTCC------CCCCTTS
T ss_pred             ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH--------HHHHHhcCCc------CCCCccC
Confidence            4577889999987        899999999999999 898887543221        2222222211      1122334


Q ss_pred             HHHHHHHHHHhccCCCCCCCCCCC
Q 039471          340 ARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       340 ~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +..+.+++.+||+.||++|||++|
T Consensus       231 ~~~l~~li~~~l~~~p~~Rps~~~  254 (267)
T 3t9t_A          231 STHVYQIMNHCWRERPEDRPAFSR  254 (267)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             cHHHHHHHHHHccCChhhCcCHHH
Confidence            677999999999999999999864


No 90 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=9.7e-40  Score=293.03  Aligned_cols=239  Identities=21%  Similarity=0.260  Sum_probs=176.5

Q ss_pred             ccccccccCCcceeecc-CCeeEEEEcccCC---cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          110 QSLISFNLTNSKFFFLH-SNEIAVKMLEHLK---GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~-~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ..++.+++|.++.+... ++.||+|++....   ...+.+.+|+.++++++|+||+++++++.+++..++||||+++ +|
T Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l   86 (288)
T 1ob3_A            8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DL   86 (288)
T ss_dssp             EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EH
T ss_pred             hhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CH
Confidence            34556666666555443 4459999986432   2346788999999999999999999999999999999999975 99


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      .+++...     ...+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++........  
T Consensus        87 ~~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--  156 (288)
T 1ob3_A           87 KKLLDVC-----EGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK--  156 (288)
T ss_dssp             HHHHHTS-----TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred             HHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc--
Confidence            9998543     2568999999999999999999999   99999999999999999999999999999876533221  


Q ss_pred             cccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcc-----------
Q 039471          266 RTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQ-----------  325 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  325 (363)
                      .....||..|+|||++         +|+||||+++|||++|+.||.........    ..+........           
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  232 (288)
T 1ob3_A          157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL----MRIFRILGTPNSKNWPNVTELP  232 (288)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHHHHCCCCTTTSTTGGGST
T ss_pred             cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHHHHCCCChhhchhhhccc
Confidence            1344689999999986         79999999999999999999765432211    00111100000           


Q ss_pred             cccccc-------CCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          326 ELCLDF-------EEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       326 ~~~~~~-------~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ......       ........++.+.+++.+||+.||++|||++|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  277 (288)
T 1ob3_A          233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQ  277 (288)
T ss_dssp             TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHH
Confidence            000000       00111235678899999999999999999864


No 91 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=4.9e-40  Score=308.33  Aligned_cols=232  Identities=19%  Similarity=0.252  Sum_probs=182.0

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEccc----CCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEH----LKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ..++.+++|.++.+...  ++.||+|++..    .....+.+.+|+.+++.++|+||+++++++.++...++||||++||
T Consensus        75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg  154 (410)
T 3v8s_A           75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG  154 (410)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred             EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            34556666665555444  33499999864    2334456889999999999999999999999999999999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++..       ..+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++........
T Consensus       155 ~L~~~l~~-------~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~  224 (410)
T 3v8s_A          155 DLVNLMSN-------YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV  224 (410)
T ss_dssp             EHHHHHHH-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEE
T ss_pred             cHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcc
Confidence            99999843       358999999999999999999999   99999999999999999999999999999887654322


Q ss_pred             cccccccccccccCCccc------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcccccccc
Q 039471          264 VSRTAARGTSGYIAPELF------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDF  331 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (363)
                       ......||+.|+|||++            +|+||||+++|||++|+.||.......        .+..+..+...   .
T Consensus       225 -~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~--------~~~~i~~~~~~---~  292 (410)
T 3v8s_A          225 -RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG--------TYSKIMNHKNS---L  292 (410)
T ss_dssp             -ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHTHHHH---C
T ss_pred             -cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh--------HHHHHHhcccc---c
Confidence             22456799999999976            699999999999999999997654322        22222221110   0


Q ss_pred             CCCCcHHHHHHHHHHHHHhccCCCCC--CCCCCC
Q 039471          332 EEDGDEGIARKLAIVAIWCIQWNPTE--RPSMPM  363 (363)
Q Consensus       332 ~~~~~~~~~~~l~~l~~~cl~~~p~~--RPs~~e  363 (363)
                      .......+++.+.+++.+||+.+|++  ||+++|
T Consensus       293 ~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~e  326 (410)
T 3v8s_A          293 TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEE  326 (410)
T ss_dssp             CCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHH
T ss_pred             cCCCcccccHHHHHHHHHHccChhhhCCCCCHHH
Confidence            11112245678999999999999988  998753


No 92 
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=5.6e-40  Score=307.87  Aligned_cols=232  Identities=22%  Similarity=0.287  Sum_probs=171.8

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhc-cCCCceeeeeeeeee----CCceeEEEeccCCC
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGR-IHHFHIVRLLGFCSE----GNRRTLIYEFMPNG  183 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~----~~~~~lv~e~~~~~  183 (363)
                      .++.+++|.++.+...  ++.||||++.    ....+.+|+.++.+ .+|+||+++++++..    ....++||||+++|
T Consensus        69 ~LG~G~~g~V~~~~~~~~~~~vAiK~~~----~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg  144 (400)
T 1nxk_A           69 VLGLGINGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGG  144 (400)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEEE----CSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSE
T ss_pred             eeeeccCeEEEEEEECCCCCEEEEEEeC----cchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCC
Confidence            3566666666655543  3449999996    33567789988754 479999999999865    56789999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcC---CCCeeEeccccceeccCC
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDH---NFQPKISDFGLAKLCSKD  260 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~---~~~~kl~Dfg~a~~~~~~  260 (363)
                      +|.+++....    ...+++..+..++.||+.||+|||+   .+|+||||||+|||++.   ++.+||+|||+++.....
T Consensus       145 ~L~~~l~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  217 (400)
T 1nxk_A          145 ELFSRIQDRG----DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH  217 (400)
T ss_dssp             EHHHHHHCC-------CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred             cHHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence            9999995432    2469999999999999999999999   99999999999999997   788999999999876543


Q ss_pred             ccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccC
Q 039471          261 ISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFE  332 (363)
Q Consensus       261 ~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (363)
                      ...   ....||..|+|||++        +|||||||++|||++|+.||...........    ....+..+..   ...
T Consensus       218 ~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~----~~~~i~~~~~---~~~  287 (400)
T 1nxk_A          218 NSL---TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG----MKTRIRMGQY---EFP  287 (400)
T ss_dssp             ------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS----HHHHHHHTCC---CCC
T ss_pred             Ccc---ccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH----HHHHHHcCcc---cCC
Confidence            322   445689999999998        7999999999999999999976543321111    1112221211   111


Q ss_pred             CCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          333 EDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       333 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ......++.++.+++.+||+.||++|||++|
T Consensus       288 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~e  318 (400)
T 1nxk_A          288 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE  318 (400)
T ss_dssp             TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             CcccccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            1122346678999999999999999999753


No 93 
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=6e-40  Score=309.62  Aligned_cols=230  Identities=20%  Similarity=0.314  Sum_probs=168.4

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccCC---------cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEec
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHLK---------GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEF  179 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  179 (363)
                      .++.+++|.++.+...  ++.||||++....         .....+.+|+.++++++|+||+++++++.. ...++||||
T Consensus       142 ~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~lv~e~  220 (419)
T 3i6u_A          142 TLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLEL  220 (419)
T ss_dssp             EEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SEEEEEEEC
T ss_pred             EEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-CceEEEEEc
Confidence            3555555555554433  3459999986422         122358899999999999999999999754 557899999


Q ss_pred             cCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCC---CeeEecccccee
Q 039471          180 MPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF---QPKISDFGLAKL  256 (363)
Q Consensus       180 ~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~---~~kl~Dfg~a~~  256 (363)
                      +++++|.+++.      ....+++..++.++.|++.||+|||+   .+|+||||||+|||++.++   .+||+|||+++.
T Consensus       221 ~~~g~L~~~l~------~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~  291 (419)
T 3i6u_A          221 MEGGELFDKVV------GNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI  291 (419)
T ss_dssp             CTTCBGGGGTS------SSCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred             CCCCcHHHHHh------ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEeeccccee
Confidence            99999999883      33679999999999999999999999   9999999999999997544   599999999987


Q ss_pred             ccCCccccccccccccccccCCccc-----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcc
Q 039471          257 CSKDISIVSRTAARGTSGYIAPELF-----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQ  325 (363)
Q Consensus       257 ~~~~~~~~~~~~~~gt~~y~aPE~~-----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (363)
                      .......   ....||+.|+|||++           +|+||||+++|||++|+.||........       +...+..+.
T Consensus       292 ~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-------~~~~i~~~~  361 (419)
T 3i6u_A          292 LGETSLM---RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-------LKDQITSGK  361 (419)
T ss_dssp             CC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-------HHHHHHTTC
T ss_pred             cCCCccc---cccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-------HHHHHhcCC
Confidence            7544322   345689999999986           6999999999999999999976433222       112222111


Q ss_pred             ccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          326 ELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       326 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..   .........+..+.+++.+||+.||++|||++|
T Consensus       362 ~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e  396 (419)
T 3i6u_A          362 YN---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE  396 (419)
T ss_dssp             CC---CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             CC---CCchhhcccCHHHHHHHHHHccCChhHCcCHHH
Confidence            10   001111234678999999999999999999854


No 94 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=6.6e-40  Score=295.07  Aligned_cols=239  Identities=23%  Similarity=0.363  Sum_probs=175.1

Q ss_pred             cccccccCCcceeec------cCCeeEEEEcccCCc-ChhHHHHHHHHHhccCCCceeeeeeeeee--CCceeEEEeccC
Q 039471          111 SLISFNLTNSKFFFL------HSNEIAVKMLEHLKG-NGQEFINEVATIGRIHHFHIVRLLGFCSE--GNRRTLIYEFMP  181 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~------~~~~vAvK~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~  181 (363)
                      .++.+++|.++.+.+      .+..||||++..... ..+.+.+|+.++++++|+||+++++++..  ....++||||++
T Consensus        17 ~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~   96 (295)
T 3ugc_A           17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP   96 (295)
T ss_dssp             EEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCT
T ss_pred             eeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCC
Confidence            345555555554432      233499999875432 33678999999999999999999999854  356899999999


Q ss_pred             CCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCc
Q 039471          182 NGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       182 ~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~  261 (363)
                      +++|.+++....     ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        97 ~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  168 (295)
T 3ugc_A           97 YGSLRDYLQKHK-----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK  168 (295)
T ss_dssp             TCBHHHHHHHCG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC------
T ss_pred             CCCHHHHHHhcc-----cccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCcccccccCCc
Confidence            999999996432     458999999999999999999999   999999999999999999999999999998876543


Q ss_pred             cc-cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhccc----ccc----hHHHHHHHhhhc
Q 039471          262 SI-VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQS----QIY----FPEWIYNRMRLG  324 (363)
Q Consensus       262 ~~-~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~----~~~----~~~~~~~~~~~~  324 (363)
                      .. .......++..|+|||++        +||||||+++|||++|..|+........    ...    ........+..+
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (295)
T 3ugc_A          169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN  248 (295)
T ss_dssp             -------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred             ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhcc
Confidence            22 112334577889999987        7999999999999999999876432210    000    011111111111


Q ss_pred             cccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          325 QELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                            .....+..+++.+.+++.+||+.||++|||++|
T Consensus       249 ------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e  281 (295)
T 3ugc_A          249 ------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD  281 (295)
T ss_dssp             ------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             ------CcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHH
Confidence                  112234456778999999999999999999864


No 95 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=9.5e-40  Score=291.28  Aligned_cols=230  Identities=19%  Similarity=0.263  Sum_probs=182.0

Q ss_pred             cccccccCCcceeeccCC--eeEEEEcccC-CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHH
Q 039471          111 SLISFNLTNSKFFFLHSN--EIAVKMLEHL-KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQK  187 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~--~vAvK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~  187 (363)
                      .++.+++|.++.+.....  .||+|++... ....+.+.+|++++++++|+||+++++++.++...++||||+++++|.+
T Consensus        16 ~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   95 (277)
T 3f3z_A           16 TIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFE   95 (277)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred             EEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHH
Confidence            345556665555544333  4899998643 4456789999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEE---cCCCCeeEeccccceeccCCcccc
Q 039471          188 FIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL---DHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       188 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill---~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      ++...      ..+++..+..++.|++.||+|||+   .+++|+||||+||++   +.++.+||+|||++......... 
T Consensus        96 ~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~-  165 (277)
T 3f3z_A           96 RVVHK------RVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM-  165 (277)
T ss_dssp             HHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB-
T ss_pred             HHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch-
Confidence            98543      458999999999999999999999   999999999999999   78899999999999877654332 


Q ss_pred             ccccccccccccCCccc-------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcH
Q 039471          265 SRTAARGTSGYIAPELF-------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDE  337 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~-------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (363)
                        ....||..|+|||++       +|+||||+++|||++|+.||.......        ....+..+....   ......
T Consensus       166 --~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~---~~~~~~  232 (277)
T 3f3z_A          166 --RTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE--------VMLKIREGTFTF---PEKDWL  232 (277)
T ss_dssp             --CCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCCC---CHHHHT
T ss_pred             --hccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHhCCCCC---Cchhhh
Confidence              445689999999987       899999999999999999997654322        222222221110   000111


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          338 GIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       338 ~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..++.+.+++.+||+.||++|||+.|
T Consensus       233 ~~~~~~~~li~~~l~~dp~~R~s~~~  258 (277)
T 3f3z_A          233 NVSPQAESLIRRLLTKSPKQRITSLQ  258 (277)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHH
Confidence            34678999999999999999999753


No 96 
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=2.9e-39  Score=296.82  Aligned_cols=232  Identities=22%  Similarity=0.324  Sum_probs=177.9

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCCCCHH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~  186 (363)
                      ..++.+++|.+..+...  ++.||||++.....   .+.+|++++.++ +|+||+++++++.++...++||||+++|+|.
T Consensus        28 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~  104 (342)
T 2qr7_A           28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELL  104 (342)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHH
Confidence            34455555555554433  34499999975443   345788888888 7999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCC----CCeeEeccccceeccCCcc
Q 039471          187 KFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHN----FQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       187 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~----~~~kl~Dfg~a~~~~~~~~  262 (363)
                      +++..      ...+++..+..++.||+.||+|||+   .+|+||||||+|||+..+    +.+||+|||+++.......
T Consensus       105 ~~i~~------~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~  175 (342)
T 2qr7_A          105 DKILR------QKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG  175 (342)
T ss_dssp             HHHHT------CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred             HHHHH------cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence            99943      3569999999999999999999999   999999999999998543    3499999999987655432


Q ss_pred             ccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCC
Q 039471          263 IVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEED  334 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                      .  .....||+.|+|||++        +|+||||+++|||++|..||.......     ...+...+..+..   .....
T Consensus       176 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-----~~~~~~~i~~~~~---~~~~~  245 (342)
T 2qr7_A          176 L--LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT-----PEEILARIGSGKF---SLSGG  245 (342)
T ss_dssp             C--BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC-----HHHHHHHHHHCCC---CCCST
T ss_pred             c--eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC-----HHHHHHHHccCCc---ccCcc
Confidence            2  2345689999999988        799999999999999999997543211     1223333332221   11122


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .....+..+.+++.+||+.||++|||++|
T Consensus       246 ~~~~~s~~~~~li~~~L~~dP~~R~t~~~  274 (342)
T 2qr7_A          246 YWNSVSDTAKDLVSKMLHVDPHQRLTAAL  274 (342)
T ss_dssp             TTTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             ccccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            23456778999999999999999999753


No 97 
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=1e-39  Score=299.16  Aligned_cols=221  Identities=23%  Similarity=0.237  Sum_probs=178.3

Q ss_pred             ccccccccCCcceeec--cCCeeEEEEcccCCc---------ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEe
Q 039471          110 QSLISFNLTNSKFFFL--HSNEIAVKMLEHLKG---------NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYE  178 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  178 (363)
                      ..++.+++|.++.+..  .++.||||++.....         ..+.+.+|+.++++++|+||+++++++.+.+..++|||
T Consensus        30 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e  109 (335)
T 3dls_A           30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVME  109 (335)
T ss_dssp             EECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEE
Confidence            3455666666665532  344499999975431         33467889999999999999999999999999999999


Q ss_pred             ccCCC-CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceec
Q 039471          179 FMPNG-SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLC  257 (363)
Q Consensus       179 ~~~~~-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~  257 (363)
                      |+.+| +|.+++..      ...+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus       110 ~~~~g~~l~~~~~~------~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~  180 (335)
T 3dls_A          110 KHGSGLDLFAFIDR------HPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL  180 (335)
T ss_dssp             CCTTSCBHHHHHHT------CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             eCCCCccHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence            99766 99999943      3569999999999999999999999   99999999999999999999999999999887


Q ss_pred             cCCccccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccc
Q 039471          258 SKDISIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELC  328 (363)
Q Consensus       258 ~~~~~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (363)
                      ......   ....||+.|+|||++         +|+||||+++|||++|+.||.........               .  
T Consensus       181 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---------------~--  240 (335)
T 3dls_A          181 ERGKLF---YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEA---------------A--  240 (335)
T ss_dssp             CTTCCB---CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTT---------------C--
T ss_pred             CCCCce---eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhh---------------c--
Confidence            654432   345689999999987         69999999999999999999753321110               0  


Q ss_pred             cccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          329 LDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       329 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                          ...+...++.+.+++.+||+.||++|||++|
T Consensus       241 ----~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e  271 (335)
T 3dls_A          241 ----IHPPYLVSKELMSLVSGLLQPVPERRTTLEK  271 (335)
T ss_dssp             ----CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ----cCCCcccCHHHHHHHHHHccCChhhCcCHHH
Confidence                0111224567999999999999999999853


No 98 
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=5.1e-40  Score=300.00  Aligned_cols=231  Identities=22%  Similarity=0.343  Sum_probs=175.6

Q ss_pred             ccccccccCCcceeeccCC--e----eEEEEcccC--CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccC
Q 039471          110 QSLISFNLTNSKFFFLHSN--E----IAVKMLEHL--KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMP  181 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~--~----vAvK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  181 (363)
                      ..++.+++|.++.+....+  .    ||+|.+...  ....+.+.+|+.++++++|+||+++++++.+ ...++||||++
T Consensus        19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~   97 (325)
T 3kex_A           19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQLVTQYLP   97 (325)
T ss_dssp             EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEEEEEECCT
T ss_pred             eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccEEEEEeCC
Confidence            3445555655555443322  2    788877533  2334678899999999999999999999864 56889999999


Q ss_pred             CCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCc
Q 039471          182 NGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       182 ~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~  261 (363)
                      +|+|.+++...     ...+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        98 ~~~L~~~l~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  169 (325)
T 3kex_A           98 LGSLLDHVRQH-----RGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD  169 (325)
T ss_dssp             TCBSHHHHHSS-----GGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred             CCCHHHHHHHc-----cccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence            99999999543     2568999999999999999999999   999999999999999999999999999999876554


Q ss_pred             cccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccC
Q 039471          262 SIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFE  332 (363)
Q Consensus       262 ~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (363)
                      .........+|..|+|||++        +|+||||+++|||++ |+.||.......        +...+..+...     
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--------~~~~~~~~~~~-----  236 (325)
T 3kex_A          170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--------VPDLLEKGERL-----  236 (325)
T ss_dssp             TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--------HHHHHHTTCBC-----
T ss_pred             ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--------HHHHHHcCCCC-----
Confidence            43333455678899999988        799999999999999 999997643221        22222222211     


Q ss_pred             CCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          333 EDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       333 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       ..+...+..+.+++.+||+.||++|||++|
T Consensus       237 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~e  266 (325)
T 3kex_A          237 -AQPQICTIDVYMVMVKCWMIDENIRPTFKE  266 (325)
T ss_dssp             -CCCTTBCTTTTHHHHHHTCSCTTTSCCHHH
T ss_pred             -CCCCcCcHHHHHHHHHHcCCChhhCcCHHH
Confidence             112234556889999999999999999853


No 99 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=9.4e-40  Score=308.70  Aligned_cols=234  Identities=18%  Similarity=0.219  Sum_probs=183.0

Q ss_pred             ccccccccCCcceeeccC--CeeEEEEccc----CCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLHS--NEIAVKMLEH----LKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~--~~vAvK~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ..++.+++|.+..+....  +.||||++..    .....+.+.+|..++..++|+||+++++++.++...++||||+++|
T Consensus        80 ~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg  159 (437)
T 4aw2_A           80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGG  159 (437)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred             EEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCC
Confidence            345666666666655543  3499999964    2233456889999999999999999999999999999999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++...     ...+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+|+....+...
T Consensus       160 ~L~~~l~~~-----~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~  231 (437)
T 4aw2_A          160 DLLTLLSKF-----EDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV  231 (437)
T ss_dssp             BHHHHHHTT-----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE
T ss_pred             cHHHHHHHc-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCc
Confidence            999999542     2569999999999999999999999   99999999999999999999999999999877554332


Q ss_pred             cccccccccccccCCccc-------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcc-cccc
Q 039471          264 VSRTAARGTSGYIAPELF-------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQ-ELCL  329 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~-------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  329 (363)
                       ......||+.|+|||++             +|+|||||++|||++|+.||.......        .+..+.... ....
T Consensus       232 -~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~--------~~~~i~~~~~~~~~  302 (437)
T 4aw2_A          232 -QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE--------TYGKIMNHKERFQF  302 (437)
T ss_dssp             -ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHTHHHHCCC
T ss_pred             -ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH--------HHHhhhhccccccC
Confidence             22345799999999985             699999999999999999998654322        222221111 1111


Q ss_pred             ccCCCCcHHHHHHHHHHHHHhccCCCCC--CCCCCC
Q 039471          330 DFEEDGDEGIARKLAIVAIWCIQWNPTE--RPSMPM  363 (363)
Q Consensus       330 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~--RPs~~e  363 (363)
                         +.....+++++.+++.+||+.+|++  ||+++|
T Consensus       303 ---p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~e  335 (437)
T 4aw2_A          303 ---PTQVTDVSENAKDLIRRLICSREHRLGQNGIED  335 (437)
T ss_dssp             ---CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHH
T ss_pred             ---CcccccCCHHHHHHHHHHhcccccccCCCCHHH
Confidence               1112235678999999999988888  898753


No 100
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=8.5e-40  Score=299.16  Aligned_cols=235  Identities=17%  Similarity=0.160  Sum_probs=179.2

Q ss_pred             ccccccccCCcceee--ccCCeeEEEEcccCCcChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCCCCHH
Q 039471          110 QSLISFNLTNSKFFF--LHSNEIAVKMLEHLKGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~--~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~  186 (363)
                      ..++.+++|.++.+.  ..++.||||++.... ..+.+.+|+.+++++ +|+||+++++++..+...++||||+ +++|.
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~   92 (330)
T 2izr_A           15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLE   92 (330)
T ss_dssp             EECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred             EEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHH
Confidence            445666666666655  234459999987443 345788999999999 8999999999999999999999999 89999


Q ss_pred             HHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCC-----eeEeccccceeccCCc
Q 039471          187 KFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ-----PKISDFGLAKLCSKDI  261 (363)
Q Consensus       187 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~-----~kl~Dfg~a~~~~~~~  261 (363)
                      +++...     ...+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.     +||+|||+++......
T Consensus        93 ~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~  164 (330)
T 2izr_A           93 DLFDLC-----DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE  164 (330)
T ss_dssp             HHHHHT-----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred             HHHHHc-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence            999643     2579999999999999999999999   99999999999999998877     9999999999765433


Q ss_pred             ccc-----ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccc
Q 039471          262 SIV-----SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELC  328 (363)
Q Consensus       262 ~~~-----~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (363)
                      ...     ......||..|+|||++        +|+||||+++|||++|+.||.........     .....+.......
T Consensus       165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~-----~~~~~i~~~~~~~  239 (330)
T 2izr_A          165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK-----ERYQKIGDTKRAT  239 (330)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHH-----HHHHHHHHHHHHS
T ss_pred             CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHH-----HHHHHHHhhhccC
Confidence            211     12355699999999988        79999999999999999999765322211     1111111111100


Q ss_pred             cccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCC
Q 039471          329 LDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMP  362 (363)
Q Consensus       329 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~  362 (363)
                      ..  .......+ ++.+++.+||+.+|.+|||++
T Consensus       240 ~~--~~~~~~~p-~~~~li~~~l~~~p~~RP~~~  270 (330)
T 2izr_A          240 PI--EVLCENFP-EMATYLRYVRRLDFFEKPDYD  270 (330)
T ss_dssp             CH--HHHTTTCH-HHHHHHHHHHHCCTTCCCCHH
T ss_pred             CH--HHHhccCh-HHHHHHHHHHhCCCCCCCCHH
Confidence            00  00001123 899999999999999999975


No 101
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=1.2e-39  Score=297.10  Aligned_cols=231  Identities=22%  Similarity=0.288  Sum_probs=181.0

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCc-------ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEecc
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKG-------NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      ..++.+++|.++.+...  +..||||++.....       ..+++.+|+.++++++|+||+++++++.+....++||||+
T Consensus        18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   97 (321)
T 2a2a_A           18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELV   97 (321)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             eEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcC
Confidence            34555666665555443  44599999864322       2467999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCC----CeeEecccccee
Q 039471          181 PNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF----QPKISDFGLAKL  256 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~----~~kl~Dfg~a~~  256 (363)
                      ++++|.+++..      ...+++..+..++.|++.||+|||+   .+|+||||||+||+++.++    .+||+|||++..
T Consensus        98 ~~~~L~~~l~~------~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~  168 (321)
T 2a2a_A           98 SGGELFDFLAQ------KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (321)
T ss_dssp             CSCBHHHHHHT------CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred             CCCcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence            99999999943      3568999999999999999999999   9999999999999999887    799999999988


Q ss_pred             ccCCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccc
Q 039471          257 CSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELC  328 (363)
Q Consensus       257 ~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (363)
                      .......   ....||..|+|||++        +|+||||+++|||++|+.||.......        ....+.....  
T Consensus       169 ~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------~~~~i~~~~~--  235 (321)
T 2a2a_A          169 IEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--------TLANITSVSY--  235 (321)
T ss_dssp             CCTTCCC---CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--------HHHHHHTTCC--
T ss_pred             cCccccc---cccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHhccc--
Confidence            7654322   345689999999987        799999999999999999997643321        1111211110  


Q ss_pred             cccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          329 LDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       329 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       ..........+..+.+++.+||+.||++|||++|
T Consensus       236 -~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e  269 (321)
T 2a2a_A          236 -DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQE  269 (321)
T ss_dssp             -CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHH
T ss_pred             -ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHH
Confidence             0111111234567999999999999999999753


No 102
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=4.7e-39  Score=291.31  Aligned_cols=239  Identities=23%  Similarity=0.284  Sum_probs=176.3

Q ss_pred             ccccccccCCcceeec--cCCeeEEEEcccCC------cChhHHHHHHHHHhccC---CCceeeeeeeeeeCC-----ce
Q 039471          110 QSLISFNLTNSKFFFL--HSNEIAVKMLEHLK------GNGQEFINEVATIGRIH---HFHIVRLLGFCSEGN-----RR  173 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~------~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~-----~~  173 (363)
                      ..++.+++|.++.+..  .++.||||++....      .....+.+|+.++++++   |+||+++++++....     ..
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~   94 (308)
T 3g33_A           15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKV   94 (308)
T ss_dssp             EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEE
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeE
Confidence            3455666666655542  34459999986322      22357778888887775   999999999997655     57


Q ss_pred             eEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEecccc
Q 039471          174 TLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL  253 (363)
Q Consensus       174 ~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~  253 (363)
                      +++|||+. ++|.+++.....    ..+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus        95 ~lv~e~~~-~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  166 (308)
T 3g33_A           95 TLVFEHVD-QDLRTYLDKAPP----PGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGL  166 (308)
T ss_dssp             EEEEECCC-CBHHHHHHTCCT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred             EEEehhhh-cCHHHHHhhccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence            99999997 599999964332    459999999999999999999999   9999999999999999999999999999


Q ss_pred             ceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcc
Q 039471          254 AKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQ  325 (363)
Q Consensus       254 a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (363)
                      ++........   ....||..|+|||++        +|+||||+++|||++|+.||.........    ..+.+.+....
T Consensus       167 a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~----~~i~~~~~~~~  239 (308)
T 3g33_A          167 ARIYSYQMAL---TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL----GKIFDLIGLPP  239 (308)
T ss_dssp             TTTSTTCCCS---GGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHH----HHHHHHHCCCC
T ss_pred             ccccCCCccc---CCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHHHhCCCC
Confidence            9876543322   445689999999988        89999999999999999999765443221    11111110000


Q ss_pred             cccc-----------c-cCC----CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          326 ELCL-----------D-FEE----DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       326 ~~~~-----------~-~~~----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ....           . ...    ....+.+..+.+++.+||++||++|||++|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  293 (308)
T 3g33_A          240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFR  293 (308)
T ss_dssp             TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHH
Confidence            0000           0 000    011234577899999999999999999864


No 103
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=4.6e-39  Score=288.31  Aligned_cols=227  Identities=23%  Similarity=0.369  Sum_probs=175.4

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccCCcC--------hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEecc
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHLKGN--------GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      .++.+++|.++.+...  ++.||||++......        .+++.+|+.++++++|+||+++++++.+..  ++||||+
T Consensus        26 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~  103 (287)
T 4f0f_A           26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFV  103 (287)
T ss_dssp             ECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECC
T ss_pred             ccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEec
Confidence            3456666666555443  445999998643221        167899999999999999999999987654  6999999


Q ss_pred             CCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--ceecCCCCCceEEcCCCC-----eeEecccc
Q 039471          181 PNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQR--ILHFDIKPHNILLDHNFQ-----PKISDFGL  253 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~dikp~Nill~~~~~-----~kl~Dfg~  253 (363)
                      ++++|.+++...     ...+++..++.++.|++.||+|||+   .+  |+||||||+|||++.++.     +||+|||+
T Consensus       104 ~~~~L~~~l~~~-----~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~  175 (287)
T 4f0f_A          104 PCGDLYHRLLDK-----AHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL  175 (287)
T ss_dssp             TTCBHHHHHHCT-----TSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred             CCCCHHHHHhcc-----cCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence            999999988533     2579999999999999999999999   89  999999999999988776     99999999


Q ss_pred             ceeccCCccccccccccccccccCCccc----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhh
Q 039471          254 AKLCSKDISIVSRTAARGTSGYIAPELF----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRL  323 (363)
Q Consensus       254 a~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (363)
                      ++.....     .....||..|+|||++          +|+||||+++|||++|+.||........     .. ......
T Consensus       176 ~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-----~~-~~~~~~  244 (287)
T 4f0f_A          176 SQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-----KF-INMIRE  244 (287)
T ss_dssp             CBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH-----HH-HHHHHH
T ss_pred             ccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH-----HH-HHHHhc
Confidence            9754432     2345689999999987          7999999999999999999975432211     00 111111


Q ss_pred             ccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          324 GQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .     ......+..+++.+.+++.+||+.||++|||++|
T Consensus       245 ~-----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  279 (287)
T 4f0f_A          245 E-----GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSY  279 (287)
T ss_dssp             S-----CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             c-----CCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHH
Confidence            1     1112233455678999999999999999999864


No 104
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=2.2e-39  Score=296.03  Aligned_cols=226  Identities=19%  Similarity=0.203  Sum_probs=170.0

Q ss_pred             cccccccCCcceeec-----cCCeeEEEEcccCC-----cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEecc
Q 039471          111 SLISFNLTNSKFFFL-----HSNEIAVKMLEHLK-----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~-----~~~~vAvK~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      .++.+++|.++.+..     .++.||+|+++...     .....+.+|+.++++++|+||+++++++..++..++||||+
T Consensus        24 ~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~  103 (327)
T 3a62_A           24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYL  103 (327)
T ss_dssp             EEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred             EEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCC
Confidence            345555555554433     34459999997432     23456789999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCC
Q 039471          181 PNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD  260 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~  260 (363)
                      ++++|.+++...      ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus       104 ~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~  174 (327)
T 3a62_A          104 SGGELFMQLERE------GIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD  174 (327)
T ss_dssp             TTEEHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC------
T ss_pred             CCCcHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCcccccccC
Confidence            999999999543      468999999999999999999999   99999999999999999999999999999765433


Q ss_pred             ccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccC
Q 039471          261 ISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFE  332 (363)
Q Consensus       261 ~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (363)
                      ...  .....||+.|+|||++        +|+||||+++|||++|+.||.......        ....+....       
T Consensus       175 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--------~~~~i~~~~-------  237 (327)
T 3a62_A          175 GTV--THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK--------TIDKILKCK-------  237 (327)
T ss_dssp             ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--------HHHHHHHTC-------
T ss_pred             Ccc--ccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHhCC-------
Confidence            221  2345689999999987        799999999999999999997654321        122222111       


Q ss_pred             CCCcHHHHHHHHHHHHHhccCCCCCCCCCC
Q 039471          333 EDGDEGIARKLAIVAIWCIQWNPTERPSMP  362 (363)
Q Consensus       333 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~  362 (363)
                      ...+...+..+.+++.+||+.||++||++.
T Consensus       238 ~~~p~~~~~~~~~li~~~L~~dp~~R~~~~  267 (327)
T 3a62_A          238 LNLPPYLTQEARDLLKKLLKRNAASRLGAG  267 (327)
T ss_dssp             CCCCTTSCHHHHHHHHHHSCSCGGGSTTSS
T ss_pred             CCCCCCCCHHHHHHHHHHHhcCHhhccCCC
Confidence            112234567899999999999999999653


No 105
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=1.7e-39  Score=297.76  Aligned_cols=242  Identities=23%  Similarity=0.262  Sum_probs=173.1

Q ss_pred             ccccccccCCcceeeccCCeeEEEEcccCCcChhHHHHHHHH--HhccCCCceeeeeeeee-----eCCceeEEEeccCC
Q 039471          110 QSLISFNLTNSKFFFLHSNEIAVKMLEHLKGNGQEFINEVAT--IGRIHHFHIVRLLGFCS-----EGNRRTLIYEFMPN  182 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~-----~~~~~~lv~e~~~~  182 (363)
                      ..++.+++|.++.....++.||||++....  .+.+..|.++  +..++|+||+++++.+.     .....++||||+++
T Consensus        19 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~   96 (336)
T 3g2f_A           19 ELIGRGRYGAVYKGSLDERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPN   96 (336)
T ss_dssp             EEEEECSSEEEEEEEETTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTT
T ss_pred             eecccCCCeEEEEEEECCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCC
Confidence            445666666666665666679999997433  3445555555  44589999999998653     23367899999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC---------CceecCCCCCceEEcCCCCeeEecccc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQ---------RILHFDIKPHNILLDHNFQPKISDFGL  253 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~---------~i~H~dikp~Nill~~~~~~kl~Dfg~  253 (363)
                      |+|.+++..       ...++..+..++.|++.||+|||+   .         +|+||||||+|||++.++.+||+|||+
T Consensus        97 g~L~~~l~~-------~~~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~  166 (336)
T 3g2f_A           97 GSLXKYLSL-------HTSDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL  166 (336)
T ss_dssp             CBHHHHHHH-------CCBCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred             CcHHHHHhh-------cccchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence            999999943       335889999999999999999999   7         999999999999999999999999999


Q ss_pred             ceeccCCcc------ccccccccccccccCCccc---------------cCceehhHHHHHHhcCCCCCCcchhccccc-
Q 039471          254 AKLCSKDIS------IVSRTAARGTSGYIAPELF---------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQI-  311 (363)
Q Consensus       254 a~~~~~~~~------~~~~~~~~gt~~y~aPE~~---------------~Di~slG~il~el~~g~~~~~~~~~~~~~~-  311 (363)
                      ++.......      ........||..|+|||++               +||||||+++|||++|..|+.......... 
T Consensus       167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~  246 (336)
T 3g2f_A          167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM  246 (336)
T ss_dssp             CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCC
T ss_pred             eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHH
Confidence            987754321      1112344689999999986               599999999999999987765433221110 


Q ss_pred             ----------chHHHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          312 ----------YFPEWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       312 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                                .+..+.......................++.+.+++.+||+.||++|||++|
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  308 (336)
T 3g2f_A          247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQX  308 (336)
T ss_dssp             TTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             hhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHH
Confidence                      0111111111111111111112233457888999999999999999999864


No 106
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=2.5e-39  Score=289.50  Aligned_cols=231  Identities=20%  Similarity=0.282  Sum_probs=180.4

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ..++.+++|.++.+...  +..||+|++......   .+.+.+|+.++++++|+||+++++++.+++..++||||+++++
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~   91 (284)
T 3kk8_A           12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE   91 (284)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCC
Confidence            33455555555544333  445999998654322   3578899999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCC---eeEeccccceeccCCc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ---PKISDFGLAKLCSKDI  261 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~---~kl~Dfg~a~~~~~~~  261 (363)
                      |.+++...      ..+++..+..++.|++.||+|||+   .+++||||||+||+++.++.   +||+|||.+.......
T Consensus        92 l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~  162 (284)
T 3kk8_A           92 LFEDIVAR------EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE  162 (284)
T ss_dssp             HHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred             HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence            99988543      468999999999999999999999   99999999999999986655   9999999998776543


Q ss_pred             cccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCC
Q 039471          262 SIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEE  333 (363)
Q Consensus       262 ~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (363)
                      ..   ....||..|+|||++        +|+||||+++|+|++|+.||.......        ....+..+..   ....
T Consensus       163 ~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--------~~~~~~~~~~---~~~~  228 (284)
T 3kk8_A          163 AW---HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--------LYAQIKAGAY---DYPS  228 (284)
T ss_dssp             BC---CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHTCC---CCCT
T ss_pred             cc---cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH--------HHHHHHhccc---cCCc
Confidence            32   345689999999987        899999999999999999997644322        2222222211   1111


Q ss_pred             CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          334 DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       334 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ......++.+.+++.+||+.||++|||++|
T Consensus       229 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  258 (284)
T 3kk8_A          229 PEWDTVTPEAKSLIDSMLTVNPKKRITADQ  258 (284)
T ss_dssp             TTTTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             hhhcccCHHHHHHHHHHcccChhhCCCHHH
Confidence            222345677999999999999999999864


No 107
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=2e-39  Score=289.98  Aligned_cols=229  Identities=21%  Similarity=0.337  Sum_probs=167.0

Q ss_pred             cccccccCCcceeeccC-----CeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          111 SLISFNLTNSKFFFLHS-----NEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~~-----~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      .++.+++|.++.+....     ..||+|+.....  ...+.+.+|+.++++++|+||+++++++. ++..++||||++++
T Consensus        22 ~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~  100 (281)
T 1mp8_A           22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLG  100 (281)
T ss_dssp             EEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTE
T ss_pred             EeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecCCCC
Confidence            34556666655544432     139999987532  22457899999999999999999999985 45788999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++....     ..+++..+..++.|++.||+|||+   .+++||||||+|||++.++.+||+|||+++........
T Consensus       101 ~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  172 (281)
T 1mp8_A          101 ELRSFLQVRK-----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY  172 (281)
T ss_dssp             EHHHHHHHTT-----TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-------------
T ss_pred             CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccCccccc
Confidence            9999995432     468999999999999999999999   99999999999999999999999999999876544322


Q ss_pred             cccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCC
Q 039471          264 VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEED  334 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                       ......+++.|+|||++        +|+||||+++|||++ |..||.......        ....+..+..      ..
T Consensus       173 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--------~~~~i~~~~~------~~  237 (281)
T 1mp8_A          173 -KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--------VIGRIENGER------LP  237 (281)
T ss_dssp             -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------HHHHHHTTCC------CC
T ss_pred             -ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--------HHHHHHcCCC------CC
Confidence             12334467889999987        799999999999996 899987644322        1222222211      12


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .+..+++.+.+++.+||+.||++|||++|
T Consensus       238 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~  266 (281)
T 1mp8_A          238 MPPNCPPTLYSLMTKCWAYDPSRRPRFTE  266 (281)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence            23445678999999999999999999853


No 108
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=1.7e-39  Score=301.36  Aligned_cols=226  Identities=21%  Similarity=0.246  Sum_probs=171.4

Q ss_pred             cccccccCCcceeeccC--CeeEEEEcccCC----cChhHHHHHHHH-HhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          111 SLISFNLTNSKFFFLHS--NEIAVKMLEHLK----GNGQEFINEVAT-IGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~~--~~vAvK~~~~~~----~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      .++.+++|.+..+....  ..||||++....    ...+.+.+|..+ ++.++|+||+++++++.+.+..++||||+++|
T Consensus        45 ~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg  124 (373)
T 2r5t_A           45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG  124 (373)
T ss_dssp             EEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             EEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCC
Confidence            34566666665555443  349999996432    233456677776 46789999999999999999999999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++...      ..+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++....... 
T Consensus       125 ~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~-  194 (373)
T 2r5t_A          125 ELFYHLQRE------RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS-  194 (373)
T ss_dssp             BHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC-
T ss_pred             cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccccccCCC-
Confidence            999999543      468999999999999999999999   9999999999999999999999999999986433222 


Q ss_pred             cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          264 VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                       ......||+.|+|||++        +|+||||+++|||++|..||.......        ++..+.....       ..
T Consensus       195 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~--------~~~~i~~~~~-------~~  258 (373)
T 2r5t_A          195 -TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE--------MYDNILNKPL-------QL  258 (373)
T ss_dssp             -CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH--------HHHHHHHSCC-------CC
T ss_pred             -ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH--------HHHHHHhccc-------CC
Confidence             12455699999999987        899999999999999999997653321        2233322211       11


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERPSMP  362 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RPs~~  362 (363)
                      +..++..+.+++.+||+.||++||++.
T Consensus       259 ~~~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          259 KPNITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             CSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             CCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence            234567799999999999999999985


No 109
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.6e-39  Score=296.43  Aligned_cols=238  Identities=21%  Similarity=0.317  Sum_probs=175.2

Q ss_pred             ccccccccCCcceeeccCCeeEEEEcccCCcChhHHHHHHHHHhcc--CCCceeeeeeeeeeC----CceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLHSNEIAVKMLEHLKGNGQEFINEVATIGRI--HHFHIVRLLGFCSEG----NRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~----~~~~lv~e~~~~~  183 (363)
                      ..++.+++|.++.....++.||||++....  ...+.+|.+++..+  +|+||+++++++...    ...++||||++++
T Consensus        43 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g  120 (337)
T 3mdy_A           43 KQIGKGRYGEVWMGKWRGEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENG  120 (337)
T ss_dssp             EEEEEETTEEEEEEEETTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTC
T ss_pred             eEeecCCCeEEEEEEECCceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCC
Confidence            445667777777666667779999986433  34555666666554  899999999999877    6889999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC--------CceecCCCCCceEEcCCCCeeEeccccce
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQ--------RILHFDIKPHNILLDHNFQPKISDFGLAK  255 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~--------~i~H~dikp~Nill~~~~~~kl~Dfg~a~  255 (363)
                      +|.+++..       ..+++..++.++.|++.||+|||+   .        +|+||||||+|||++.++.+||+|||+++
T Consensus       121 ~L~~~l~~-------~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~  190 (337)
T 3mdy_A          121 SLYDYLKS-------TTLDAKSMLKLAYSSVSGLCHLHT---EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  190 (337)
T ss_dssp             BHHHHHHH-------CCBCHHHHHHHHHHHHHHHHHHHS---CBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             cHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHHH---hhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence            99999943       358999999999999999999998   7        99999999999999999999999999998


Q ss_pred             eccCCcccc--ccccccccccccCCccc--------------cCceehhHHHHHHhcC----------CCCCCcchhccc
Q 039471          256 LCSKDISIV--SRTAARGTSGYIAPELF--------------SRNFCYGMMLLEMVGC----------RKNNDPAVEIQS  309 (363)
Q Consensus       256 ~~~~~~~~~--~~~~~~gt~~y~aPE~~--------------~Di~slG~il~el~~g----------~~~~~~~~~~~~  309 (363)
                      .........  ......||..|+|||++              +||||||+++|||++|          ..||........
T Consensus       191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~  270 (337)
T 3mdy_A          191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP  270 (337)
T ss_dssp             ECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             eeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC
Confidence            765443221  11345689999999987              6999999999999999          445443222111


Q ss_pred             ccchHHHHHHHhhhccccccccCC-CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          310 QIYFPEWIYNRMRLGQELCLDFEE-DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .  +.. ....... ......... .....+++.+.+++.+||+.||++|||++|
T Consensus       271 ~--~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~e  321 (337)
T 3mdy_A          271 S--YED-MREIVCI-KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALR  321 (337)
T ss_dssp             C--HHH-HHHHHTT-SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             c--hhh-hHHHHhh-hccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHH
Confidence            1  111 1111111 111111111 123478889999999999999999999864


No 110
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=2.6e-39  Score=288.77  Aligned_cols=231  Identities=24%  Similarity=0.395  Sum_probs=182.0

Q ss_pred             ccccccccCCcceeeccCC-eeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHHH
Q 039471          110 QSLISFNLTNSKFFFLHSN-EIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKF  188 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~-~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~  188 (363)
                      ..++.+++|.++.+...+. .||||++.......+.+.+|++++++++|+||+++++++.+ +..++||||+++++|.++
T Consensus        19 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~   97 (279)
T 1qpc_A           19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF   97 (279)
T ss_dssp             EEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHH
T ss_pred             eeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCCCCHHHH
Confidence            3455666666655544443 49999998766677899999999999999999999999874 468999999999999999


Q ss_pred             hhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccccc
Q 039471          189 IFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTA  268 (363)
Q Consensus       189 l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  268 (363)
                      +....    ...+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++......... ....
T Consensus        98 l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~  169 (279)
T 1qpc_A           98 LKTPS----GIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREG  169 (279)
T ss_dssp             TTSHH----HHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE-CCTT
T ss_pred             HhcCC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc-cccC
Confidence            94321    1369999999999999999999999   99999999999999999999999999999887654322 2234


Q ss_pred             ccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHH
Q 039471          269 ARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGI  339 (363)
Q Consensus       269 ~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (363)
                      ..++..|+|||++        +|+||||+++|||++ |+.||.......        ....+..+..      ...+...
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--------~~~~~~~~~~------~~~~~~~  235 (279)
T 1qpc_A          170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--------VIQNLERGYR------MVRPDNC  235 (279)
T ss_dssp             CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--------HHHHHHTTCC------CCCCTTC
T ss_pred             CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--------HHHHHhcccC------CCCcccc
Confidence            4567889999987        799999999999999 888886543221        2222222211      1223345


Q ss_pred             HHHHHHHHHHhccCCCCCCCCCCC
Q 039471          340 ARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       340 ~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +..+.+++.+||+.||++|||++|
T Consensus       236 ~~~l~~li~~~l~~~p~~Rps~~~  259 (279)
T 1qpc_A          236 PEELYQLMRLCWKERPEDRPTFDY  259 (279)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             cHHHHHHHHHHhccChhhCCCHHH
Confidence            678999999999999999999753


No 111
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=2.1e-39  Score=294.17  Aligned_cols=225  Identities=22%  Similarity=0.209  Sum_probs=171.9

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccCCcCh---hHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNG---QEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~---~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      .++.+++|.++.+...  ++.||||++.......   .++..|+..+.++ +|+||+++++++.+++..++||||+ +++
T Consensus        64 ~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~  142 (311)
T 3p1a_A           64 RLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPS  142 (311)
T ss_dssp             EEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCB
T ss_pred             eeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCC
Confidence            4556666666655443  4459999986543332   3455666666655 8999999999999999999999999 679


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++....     ..+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||++......... 
T Consensus       143 L~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~-  213 (311)
T 3p1a_A          143 LQQHCEAWG-----ASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG-  213 (311)
T ss_dssp             HHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred             HHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCC-
Confidence            999986543     469999999999999999999999   99999999999999999999999999999877544322 


Q ss_pred             ccccccccccccCCccc-------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcH
Q 039471          265 SRTAARGTSGYIAPELF-------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDE  337 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~-------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (363)
                        ....||+.|+|||++       +||||||+++|||++|..++......           ..+..+..     ......
T Consensus       214 --~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~-----------~~~~~~~~-----~~~~~~  275 (311)
T 3p1a_A          214 --EVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGW-----------QQLRQGYL-----PPEFTA  275 (311)
T ss_dssp             ---CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH-----------HHHTTTCC-----CHHHHT
T ss_pred             --cccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH-----------HHHhccCC-----Cccccc
Confidence              345589999999988       79999999999999998776543221           11111110     011122


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          338 GIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       338 ~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..++.+.+++.+||++||++|||++|
T Consensus       276 ~~~~~l~~li~~~L~~dP~~Rpt~~e  301 (311)
T 3p1a_A          276 GLSSELRSVLVMMLEPDPKLRATAEA  301 (311)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            34678999999999999999999864


No 112
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=5.9e-39  Score=291.27  Aligned_cols=236  Identities=22%  Similarity=0.350  Sum_probs=171.6

Q ss_pred             cccccccCCcceeeccC-----CeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeCC-----ceeEEE
Q 039471          111 SLISFNLTNSKFFFLHS-----NEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEGN-----RRTLIY  177 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~~-----~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~  177 (363)
                      .++.+++|.++.+....     ..||||++......   .+.+.+|+.++++++|+||+++++++.+..     ..++||
T Consensus        41 ~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~  120 (313)
T 3brb_A           41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVIL  120 (313)
T ss_dssp             EEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEE
T ss_pred             ceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEE
Confidence            34566666665544432     14999999754322   357889999999999999999999987654     359999


Q ss_pred             eccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceec
Q 039471          178 EFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLC  257 (363)
Q Consensus       178 e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~  257 (363)
                      ||+++++|.+++...........+++..++.++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||+++..
T Consensus       121 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~  197 (313)
T 3brb_A          121 PFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKI  197 (313)
T ss_dssp             ECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEEECSCSCC---
T ss_pred             ecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEEeecCcceec
Confidence            999999999999655433445679999999999999999999999   99999999999999999999999999999876


Q ss_pred             cCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccc
Q 039471          258 SKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELC  328 (363)
Q Consensus       258 ~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (363)
                      .............++..|+|||.+        +|+||||+++|||++ |..||.......        ....+..+..  
T Consensus       198 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--------~~~~~~~~~~--  267 (313)
T 3brb_A          198 YSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--------MYDYLLHGHR--  267 (313)
T ss_dssp             -------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--------HHHHHHTTCC--
T ss_pred             ccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--------HHHHHHcCCC--
Confidence            554332223445578899999987        799999999999999 888886543322        1222222211  


Q ss_pred             cccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          329 LDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       329 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                          ...+..+++.+.+++.+||+.||++|||++|
T Consensus       268 ----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  298 (313)
T 3brb_A          268 ----LKQPEDCLDELYEIMYSCWRTDPLDRPTFSV  298 (313)
T ss_dssp             ----CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred             ----CCCCccccHHHHHHHHHHcCCChhhCcCHHH
Confidence                1223445678999999999999999999853


No 113
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=7.2e-40  Score=318.10  Aligned_cols=229  Identities=24%  Similarity=0.366  Sum_probs=181.2

Q ss_pred             ccccccCCcceeeccC-CeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHHHhh
Q 039471          112 LISFNLTNSKFFFLHS-NEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKFIF  190 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~~-~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~  190 (363)
                      ++.+++|.++.+...+ ..||||+++......++|.+|++++++++|+||+++++++.+ ...++||||+++|+|.+++.
T Consensus       275 lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~  353 (535)
T 2h8h_A          275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLK  353 (535)
T ss_dssp             EEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHS
T ss_pred             cccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHh
Confidence            4445555555544444 349999998766667899999999999999999999999876 67899999999999999995


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccccccc
Q 039471          191 SKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTAAR  270 (363)
Q Consensus       191 ~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  270 (363)
                      ...    ...+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++....... .......
T Consensus       354 ~~~----~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~  425 (535)
T 2h8h_A          354 GET----GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAK  425 (535)
T ss_dssp             HHH----HTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH-HTTCSTT
T ss_pred             hcC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce-ecccCCc
Confidence            432    1458999999999999999999999   9999999999999999999999999999987654321 1223345


Q ss_pred             ccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHH
Q 039471          271 GTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIAR  341 (363)
Q Consensus       271 gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (363)
                      ++..|+|||++        +||||||+++|||++ |+.||.......        +...+..+..      ...+..++.
T Consensus       426 ~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--------~~~~i~~~~~------~~~~~~~~~  491 (535)
T 2h8h_A          426 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--------VLDQVERGYR------MPCPPECPE  491 (535)
T ss_dssp             SCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--------HHHHHHTTCC------CCCCTTCCH
T ss_pred             CcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCC------CCCCCCCCH
Confidence            67899999987        899999999999999 898887543221        2233332221      122335567


Q ss_pred             HHHHHHHHhccCCCCCCCCCCC
Q 039471          342 KLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       342 ~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .+.+++.+||+.||++|||++|
T Consensus       492 ~l~~li~~cl~~dP~~RPt~~~  513 (535)
T 2h8h_A          492 SLHDLMCQCWRKEPEERPTFEY  513 (535)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHH
Confidence            8999999999999999999853


No 114
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=2e-39  Score=314.02  Aligned_cols=231  Identities=23%  Similarity=0.273  Sum_probs=183.4

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccC----CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHL----KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ..++.+++|.++.+...  ++.||||++...    ....+.+.+|+.++++++|+||+++++++.+....++||||++||
T Consensus       190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg  269 (576)
T 2acx_A          190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG  269 (576)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCC
Confidence            34555556555554443  445999998632    334567889999999999999999999999999999999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++....    ...+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++........
T Consensus       270 ~L~~~l~~~~----~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~  342 (576)
T 2acx_A          270 DLKFHIYHMG----QAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI  342 (576)
T ss_dssp             BHHHHHHSSS----SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCE
T ss_pred             cHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccCccc
Confidence            9999995432    2459999999999999999999999   99999999999999999999999999999887654432


Q ss_pred             cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          264 VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                         ....||+.|+|||++        +|+|||||++|||++|+.||.........    ..+...+...       ....
T Consensus       343 ---~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~----~~i~~~i~~~-------~~~~  408 (576)
T 2acx_A          343 ---KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR----EEVERLVKEV-------PEEY  408 (576)
T ss_dssp             ---ECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH----HHHHHHHHHC-------CCCC
T ss_pred             ---cccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH----HHHHHHhhcc-------cccC
Confidence               345699999999988        79999999999999999999865432211    1122222211       1122


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERPSM  361 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RPs~  361 (363)
                      +..+++.+.+++.+||+.||++||++
T Consensus       409 p~~~s~~~~dLI~~lL~~dP~~R~g~  434 (576)
T 2acx_A          409 SERFSPQARSLCSQLLCKDPAERLGC  434 (576)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred             CccCCHHHHHHHHHhccCCHHHcCCC
Confidence            34567789999999999999999954


No 115
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=1.1e-39  Score=295.81  Aligned_cols=236  Identities=26%  Similarity=0.386  Sum_probs=182.5

Q ss_pred             ccccccCCcceeec-------cCCeeEEEEcccCCc--ChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccC
Q 039471          112 LISFNLTNSKFFFL-------HSNEIAVKMLEHLKG--NGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMP  181 (363)
Q Consensus       112 ~~~~~~~~~~~~~~-------~~~~vAvK~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~  181 (363)
                      ++.+++|.++.+..       .+..||||++.....  ..+.+.+|+.+++++ +|+||+++++++.+++..++||||++
T Consensus        31 lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~  110 (313)
T 1t46_A           31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC  110 (313)
T ss_dssp             EEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             hCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCC
Confidence            45555555544432       123499999975432  346789999999999 89999999999999999999999999


Q ss_pred             CCCHHHHhhhcCCC------------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEe
Q 039471          182 NGSLQKFIFSKTNS------------SSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKIS  249 (363)
Q Consensus       182 ~~sL~~~l~~~~~~------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~  249 (363)
                      +++|.+++......            .....+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+
T Consensus       111 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~  187 (313)
T 1t46_A          111 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKIC  187 (313)
T ss_dssp             TEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEETTTEEEEC
T ss_pred             CCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEcCCCCEEEc
Confidence            99999999765321            112359999999999999999999999   999999999999999999999999


Q ss_pred             ccccceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHH
Q 039471          250 DFGLAKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNR  320 (363)
Q Consensus       250 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~  320 (363)
                      |||++................+|..|+|||++        +|+||||+++|||++ |+.||........       ....
T Consensus       188 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-------~~~~  260 (313)
T 1t46_A          188 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-------FYKM  260 (313)
T ss_dssp             CCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-------HHHH
T ss_pred             cccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH-------HHHH
Confidence            99999887665443333445678899999987        899999999999998 9999876432211       1222


Q ss_pred             hhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          321 MRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +..+..      ...+...+..+.+++.+||+.||++|||++|
T Consensus       261 ~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e  297 (313)
T 1t46_A          261 IKEGFR------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ  297 (313)
T ss_dssp             HHHTCC------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             hccCCC------CCCcccCCHHHHHHHHHHcCCCchhCcCHHH
Confidence            221111      1123345678999999999999999999864


No 116
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=2.8e-39  Score=311.46  Aligned_cols=230  Identities=23%  Similarity=0.332  Sum_probs=179.6

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccC---CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHL---KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      .++.+++|.++.+...  +..||||++...   ....+.+.+|+.++++++||||+++++++.+....++||||+++|+|
T Consensus        44 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L  123 (494)
T 3lij_A           44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL  123 (494)
T ss_dssp             EEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred             EEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcH
Confidence            3455555555544433  344999998743   33457889999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCC---CCeeEeccccceeccCCcc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHN---FQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~---~~~kl~Dfg~a~~~~~~~~  262 (363)
                      .+++...      ..+++..+..++.||+.||.|||+   .+|+||||||+|||++..   +.+||+|||++........
T Consensus       124 ~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~  194 (494)
T 3lij_A          124 FDEIIHR------MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK  194 (494)
T ss_dssp             HHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred             HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence            9988543      468999999999999999999999   999999999999999764   4599999999988765433


Q ss_pred             ccccccccccccccCCccc-------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          263 IVSRTAARGTSGYIAPELF-------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~-------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                      .   ....||+.|+|||++       +||||+|+++|+|++|..||.......        +...+..+...   .....
T Consensus       195 ~---~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~~~~~---~~~~~  260 (494)
T 3lij_A          195 M---KERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE--------ILRKVEKGKYT---FDSPE  260 (494)
T ss_dssp             B---CCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHTCCC---CCSGG
T ss_pred             c---cccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCCCC---CCchh
Confidence            2   445699999999988       899999999999999999997654321        22233222211   11122


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ....++.+.+++.+||+.||++|||++|
T Consensus       261 ~~~~s~~~~~li~~~L~~dp~~R~s~~e  288 (494)
T 3lij_A          261 WKNVSEGAKDLIKQMLQFDSQRRISAQQ  288 (494)
T ss_dssp             GTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             cccCCHHHHHHHHHHCCCChhhCccHHH
Confidence            2345678999999999999999999754


No 117
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=3.4e-39  Score=294.80  Aligned_cols=230  Identities=22%  Similarity=0.336  Sum_probs=170.4

Q ss_pred             cccccccCCcceeeccC--Ce----eEEEEccc--CCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCC
Q 039471          111 SLISFNLTNSKFFFLHS--NE----IAVKMLEH--LKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~~--~~----vAvK~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      .++.+++|.++.+....  +.    ||+|.+..  .....+++.+|+.++++++|+||+++++++..+. .++++||+++
T Consensus        22 ~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~  100 (327)
T 3lzb_A           22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPF  100 (327)
T ss_dssp             EEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSS
T ss_pred             EeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCC
Confidence            34555555555544322  22    57777753  2345578999999999999999999999998755 7899999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      ++|.+++....     ..+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus       101 g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~  172 (327)
T 3lzb_A          101 GCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK  172 (327)
T ss_dssp             CBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC---------
T ss_pred             CcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc
Confidence            99999996543     569999999999999999999999   9999999999999999999999999999988765443


Q ss_pred             ccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCC
Q 039471          263 IVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEE  333 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (363)
                      ........+|..|+|||++        +|+||||+++|||++ |+.||.......        +...+..+..      .
T Consensus       173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--------~~~~~~~~~~------~  238 (327)
T 3lzb_A          173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--------ISSILEKGER------L  238 (327)
T ss_dssp             -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------HHHHHHTTCC------C
T ss_pred             cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--------HHHHHHcCCC------C
Confidence            3333445578899999987        899999999999999 999997654322        1222222211      1


Q ss_pred             CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          334 DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       334 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+...+..+.+++.+||+.||++|||++|
T Consensus       239 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~e  268 (327)
T 3lzb_A          239 PQPPICTIDVYMIMRKCWMIDADSRPKFRE  268 (327)
T ss_dssp             CCCTTBCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            223345667999999999999999999864


No 118
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=2.1e-39  Score=298.57  Aligned_cols=226  Identities=20%  Similarity=0.293  Sum_probs=177.4

Q ss_pred             ccccccccCCcceeec--cCCeeEEEEcccCCcC----hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFL--HSNEIAVKMLEHLKGN----GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ..++.+++|.++.+..  .++.||||++......    .+++.+|++++++++|+||+++++++.+++..++||||+. |
T Consensus        60 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g  138 (348)
T 1u5q_A           60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-G  138 (348)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred             eEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-C
Confidence            3455556655555442  3444999999744322    2578899999999999999999999999999999999997 6


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++....     ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.....   
T Consensus       139 ~l~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~---  207 (348)
T 1u5q_A          139 SASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---  207 (348)
T ss_dssp             EHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred             CHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence            8888885432     568999999999999999999999   99999999999999999999999999999876432   


Q ss_pred             cccccccccccccCCccc-----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccC
Q 039471          264 VSRTAARGTSGYIAPELF-----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFE  332 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~-----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (363)
                         ....||+.|+|||++           +||||||+++|||++|+.||.......       .+.. +......     
T Consensus       208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-------~~~~-~~~~~~~-----  271 (348)
T 1u5q_A          208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALYH-IAQNESP-----  271 (348)
T ss_dssp             ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-------HHHH-HHHSCCC-----
T ss_pred             ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-------HHHH-HHhcCCC-----
Confidence               334689999999975           799999999999999999987643321       1111 1111111     


Q ss_pred             CCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          333 EDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       333 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .......+..+.+++.+||+.||++|||++|
T Consensus       272 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~  302 (348)
T 1u5q_A          272 ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEV  302 (348)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcccChhhCcCHHH
Confidence            1122345677899999999999999999753


No 119
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.8e-39  Score=317.49  Aligned_cols=230  Identities=23%  Similarity=0.381  Sum_probs=177.9

Q ss_pred             cccccccCCcceeecc----CCeeEEEEcccC--CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          111 SLISFNLTNSKFFFLH----SNEIAVKMLEHL--KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~----~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      .++.+++|.++.+...    +..||||+++..  ....++|.+|++++++++|+||+++++++.. ...++||||+++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            3566666666655442    223999999753  2345789999999999999999999999976 56899999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++...     ...+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++....+....
T Consensus       422 L~~~l~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~  493 (613)
T 2ozo_A          422 LHKFLVGK-----REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY  493 (613)
T ss_dssp             HHHHHTTC-----TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred             HHHHHhhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence            99999532     3569999999999999999999999   999999999999999999999999999998765433221


Q ss_pred             -ccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCC
Q 039471          265 -SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEED  334 (363)
Q Consensus       265 -~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                       ......++..|+|||++        +||||||+++|||++ |+.||.......        +...+..+..      ..
T Consensus       494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--------~~~~i~~~~~------~~  559 (613)
T 2ozo_A          494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--------VMAFIEQGKR------ME  559 (613)
T ss_dssp             --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--------HHHHHHTTCC------CC
T ss_pred             eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--------HHHHHHcCCC------CC
Confidence             12233467899999988        899999999999998 999997643321        2333333322      12


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .+..+++.+.+++.+||+.+|++|||++|
T Consensus       560 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~  588 (613)
T 2ozo_A          560 CPPECPPELYALMSDCWIYKWEDRPDFLT  588 (613)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSTTTSCCHHH
T ss_pred             CCCcCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            33456788999999999999999999853


No 120
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=2.9e-39  Score=306.20  Aligned_cols=183  Identities=21%  Similarity=0.341  Sum_probs=144.0

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeC-----CceeEEEec
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEG-----NRRTLIYEF  179 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~  179 (363)
                      ..++.+++|.+..+...  ++.||||++......   .+++.+|++++++++|+||+++++++...     ...++||||
T Consensus        32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~  111 (432)
T 3n9x_A           32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEI  111 (432)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEEC
T ss_pred             EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEec
Confidence            34455555555554433  334999999754322   36788999999999999999999998765     578999999


Q ss_pred             cCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccC
Q 039471          180 MPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSK  259 (363)
Q Consensus       180 ~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~  259 (363)
                      ++ ++|.+++..      ...+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       112 ~~-~~L~~~~~~------~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~  181 (432)
T 3n9x_A          112 AD-SDLKKLFKT------PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS  181 (432)
T ss_dssp             CS-EEHHHHHHS------SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred             CC-cCHHHHHhc------cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence            96 599999942      3569999999999999999999999   9999999999999999999999999999998754


Q ss_pred             Cccc--------------------cccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCC
Q 039471          260 DISI--------------------VSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNND  302 (363)
Q Consensus       260 ~~~~--------------------~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~  302 (363)
                      ....                    .......||..|+|||++         +|||||||++|||++|..|+.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            3221                    112456789999999985         799999999999998655443


No 121
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=3.1e-39  Score=290.83  Aligned_cols=237  Identities=15%  Similarity=0.167  Sum_probs=180.7

Q ss_pred             ccccccccCCcceee--ccCCeeEEEEcccCCcChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCCCCHH
Q 039471          110 QSLISFNLTNSKFFF--LHSNEIAVKMLEHLKGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~--~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~  186 (363)
                      ..++.+++|.++.+.  ..++.||||++.... ..+.+.+|+.+++++ +|+|++++++++.++...++||||+ +++|.
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~   93 (298)
T 1csn_A           16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLE   93 (298)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred             EEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHH
Confidence            345566666665555  334559999986433 446788999999999 7999999999999999999999999 89999


Q ss_pred             HHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCC-----eeEeccccceeccCCc
Q 039471          187 KFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ-----PKISDFGLAKLCSKDI  261 (363)
Q Consensus       187 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~-----~kl~Dfg~a~~~~~~~  261 (363)
                      +++....     ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.     +||+|||+++......
T Consensus        94 ~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~  165 (298)
T 1csn_A           94 DLLDLCG-----RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV  165 (298)
T ss_dssp             HHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred             HHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence            9996432     469999999999999999999999   99999999999999987766     9999999998876543


Q ss_pred             cc-----cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccc
Q 039471          262 SI-----VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELC  328 (363)
Q Consensus       262 ~~-----~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (363)
                      ..     .......||..|+|||++        +|+||||+++|||++|+.||..........     ....+.......
T Consensus       166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-----~~~~~~~~~~~~  240 (298)
T 1csn_A          166 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ-----KYERIGEKKQST  240 (298)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH-----HHHHHHHHHHHS
T ss_pred             ccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH-----HHHHHHhhccCc
Confidence            21     112445689999999987        799999999999999999997743322111     111111111000


Q ss_pred             cccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          329 LDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       329 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .  .......+++.+.+++.+||+.||++|||++|
T Consensus       241 ~--~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~  273 (298)
T 1csn_A          241 P--LRELCAGFPEEFYKYMHYARNLAFDATPDYDY  273 (298)
T ss_dssp             C--HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHH
T ss_pred             c--HHHHHhhCcHHHHHHHHHHhcCCcccCCCHHH
Confidence            0  00011234678999999999999999999853


No 122
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=3.9e-39  Score=309.94  Aligned_cols=231  Identities=23%  Similarity=0.328  Sum_probs=181.9

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEccc---CCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEH---LKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ..++.+++|.++.+...  +..||||++..   .....+.+.+|+.++++++||||+++++++.+....++||||+++++
T Consensus        28 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~  107 (486)
T 3mwu_A           28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE  107 (486)
T ss_dssp             EEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCc
Confidence            33456666666555443  44599999853   23456789999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEc---CCCCeeEeccccceeccCCc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD---HNFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~---~~~~~kl~Dfg~a~~~~~~~  261 (363)
                      |.+++...      ..+++..+..++.||+.||.|||+   .+|+||||||+|||++   .++.+||+|||+++......
T Consensus       108 L~~~~~~~------~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~  178 (486)
T 3mwu_A          108 LFDEIIKR------KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (486)
T ss_dssp             HHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred             HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence            99998543      468999999999999999999999   9999999999999995   45679999999998765543


Q ss_pred             cccccccccccccccCCccc-------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCC
Q 039471          262 SIVSRTAARGTSGYIAPELF-------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEED  334 (363)
Q Consensus       262 ~~~~~~~~~gt~~y~aPE~~-------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                      ..   ....||+.|+|||++       +||||+|+++|+|++|+.||.......        +...+..+..   .....
T Consensus       179 ~~---~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~~~~---~~~~~  244 (486)
T 3mwu_A          179 KM---KDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--------ILKRVETGKY---AFDLP  244 (486)
T ss_dssp             ------CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHTCC---CSCSG
T ss_pred             cc---CCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCCC---CCCCc
Confidence            22   345699999999998       799999999999999999997654322        2222222211   11122


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ....+++.+.+++.+||+.||++|||++|
T Consensus       245 ~~~~~s~~~~~li~~~L~~dp~~R~t~~~  273 (486)
T 3mwu_A          245 QWRTISDDAKDLIRKMLTFHPSLRITATQ  273 (486)
T ss_dssp             GGGGSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             ccCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            23456778999999999999999999753


No 123
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=5.9e-39  Score=294.06  Aligned_cols=235  Identities=23%  Similarity=0.383  Sum_probs=181.1

Q ss_pred             ccccccCCcceeec---------cCCeeEEEEcccCCc--ChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEec
Q 039471          112 LISFNLTNSKFFFL---------HSNEIAVKMLEHLKG--NGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEF  179 (363)
Q Consensus       112 ~~~~~~~~~~~~~~---------~~~~vAvK~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~  179 (363)
                      ++.+++|.++.+..         .+..||||++.....  ..+++.+|+++++++ +|+||+++++++.+.+..++||||
T Consensus        43 lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~  122 (334)
T 2pvf_A           43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY  122 (334)
T ss_dssp             EEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEEC
T ss_pred             EeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEEC
Confidence            45555555554432         123499999975432  235788999999999 899999999999999999999999


Q ss_pred             cCCCCHHHHhhhcCCC----------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEe
Q 039471          180 MPNGSLQKFIFSKTNS----------SSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKIS  249 (363)
Q Consensus       180 ~~~~sL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~  249 (363)
                      +++++|.+++......          .....+++..++.++.||+.||+|||+   .+|+||||||+||+++.++.+||+
T Consensus       123 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~  199 (334)
T 2pvf_A          123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIA  199 (334)
T ss_dssp             CTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEEC
T ss_pred             CCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEEEcCCCCEEEc
Confidence            9999999999654321          112458999999999999999999999   999999999999999999999999


Q ss_pred             ccccceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHH
Q 039471          250 DFGLAKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNR  320 (363)
Q Consensus       250 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~  320 (363)
                      |||+++...............+|..|+|||++        +|+||||+++|||++ |+.||.......        +...
T Consensus       200 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--------~~~~  271 (334)
T 2pvf_A          200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------LFKL  271 (334)
T ss_dssp             CCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--------HHHH
T ss_pred             cccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH--------HHHH
Confidence            99999887654433333445578899999987        899999999999999 999986543211        2222


Q ss_pred             hhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          321 MRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +..+..      ...+..++..+.+++.+||+.+|++|||++|
T Consensus       272 ~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e  308 (334)
T 2pvf_A          272 LKEGHR------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQ  308 (334)
T ss_dssp             HHHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HhcCCC------CCCCccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            222211      1223345677999999999999999999854


No 124
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=1.8e-39  Score=313.54  Aligned_cols=231  Identities=23%  Similarity=0.345  Sum_probs=180.8

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC--------------cChhHHHHHHHHHhccCCCceeeeeeeeeeCCce
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK--------------GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRR  173 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  173 (363)
                      ..++.+++|.++.+...  +..||||++....              ...+.+.+|+.++++++||||+++++++.++...
T Consensus        42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  121 (504)
T 3q5i_A           42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYF  121 (504)
T ss_dssp             EEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             eEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence            34455555555554433  3459999986432              2346789999999999999999999999999999


Q ss_pred             eEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCC---CeeEec
Q 039471          174 TLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF---QPKISD  250 (363)
Q Consensus       174 ~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~---~~kl~D  250 (363)
                      ++||||+++|+|.+++...      ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++   .+||+|
T Consensus       122 ~lv~e~~~gg~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~D  192 (504)
T 3q5i_A          122 YLVTEFYEGGELFEQIINR------HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVD  192 (504)
T ss_dssp             EEEEECCTTCBHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred             EEEEecCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEEEEE
Confidence            9999999999999998543      569999999999999999999999   9999999999999998775   699999


Q ss_pred             cccceeccCCccccccccccccccccCCccc-------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhh
Q 039471          251 FGLAKLCSKDISIVSRTAARGTSGYIAPELF-------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRL  323 (363)
Q Consensus       251 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (363)
                      ||+++........   ....||+.|+|||++       +|+||+|+++|+|++|..||.......        +...+..
T Consensus       193 fg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~  261 (504)
T 3q5i_A          193 FGLSSFFSKDYKL---RDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD--------IIKKVEK  261 (504)
T ss_dssp             CTTCEECCTTSCB---CCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHH
T ss_pred             CCCCEEcCCCCcc---ccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHc
Confidence            9999887655332   445699999999988       799999999999999999997654322        2233332


Q ss_pred             ccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          324 GQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +...   ........+++++.+++.+||+.||.+|||++|
T Consensus       262 ~~~~---~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e  298 (504)
T 3q5i_A          262 GKYY---FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEE  298 (504)
T ss_dssp             CCCC---CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             CCCC---CCccccCCCCHHHHHHHHHHcCCChhHCCCHHH
Confidence            2211   001111235678999999999999999999864


No 125
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=9e-39  Score=299.56  Aligned_cols=241  Identities=20%  Similarity=0.250  Sum_probs=184.9

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCC--ceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGN--RRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~  183 (363)
                      ..++.+++|.++.+...  ++.||||++....  ...+.+.+|++++++++|+||+++++++.+..  ..++||||++++
T Consensus        15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g   94 (396)
T 4eut_A           15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG   94 (396)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTE
T ss_pred             EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCC
Confidence            33456666666555444  4459999997432  34577889999999999999999999997655  789999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEE----cCCCCeeEeccccceeccC
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL----DHNFQPKISDFGLAKLCSK  259 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill----~~~~~~kl~Dfg~a~~~~~  259 (363)
                      +|.+++.....   ...+++..++.++.|++.||+|||+   .+|+||||||+|||+    +.++.+||+|||+++....
T Consensus        95 ~L~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~  168 (396)
T 4eut_A           95 SLYTVLEEPSN---AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED  168 (396)
T ss_dssp             EHHHHTTSGGG---TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred             CHHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence            99999954321   2349999999999999999999999   999999999999999    7778899999999988765


Q ss_pred             CccccccccccccccccCCccc----------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhh
Q 039471          260 DISIVSRTAARGTSGYIAPELF----------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRL  323 (363)
Q Consensus       260 ~~~~~~~~~~~gt~~y~aPE~~----------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (363)
                      ....   ....||..|+|||++                +|+||||+++|||++|+.||..........   +.+...+. 
T Consensus       169 ~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~---~~~~~~~~-  241 (396)
T 4eut_A          169 DEQF---VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK---EVMYKIIT-  241 (396)
T ss_dssp             GGGS---SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCH---HHHHHHHH-
T ss_pred             CCcc---ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchH---HHHHHHhc-
Confidence            4332   345689999999975                699999999999999999997543322211   11221111 


Q ss_pred             cccc------------------ccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          324 GQEL------------------CLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       324 ~~~~------------------~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +...                  ...........++..+.+++.+||++||++|||++|
T Consensus       242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e  299 (396)
T 4eut_A          242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQ  299 (396)
T ss_dssp             SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHH
T ss_pred             CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHH
Confidence            1100                  111222345788999999999999999999999753


No 126
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.5e-39  Score=299.11  Aligned_cols=230  Identities=20%  Similarity=0.272  Sum_probs=170.2

Q ss_pred             cccccccCCcceeecc-CCeeEEEEcccCCcCh---hHHHHHHHHHhccCC--CceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          111 SLISFNLTNSKFFFLH-SNEIAVKMLEHLKGNG---QEFINEVATIGRIHH--FHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~-~~~vAvK~~~~~~~~~---~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      .++.+++|.++.+... +..||||++.......   +.+.+|+.++++++|  +||+++++++.++...++|||+ .+++
T Consensus        16 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~-~~~~   94 (343)
T 3dbq_A           16 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNID   94 (343)
T ss_dssp             EESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC-CSEE
T ss_pred             EEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC-CCCC
Confidence            3455555555444332 3349999987543332   578899999999976  9999999999999999999994 5789


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++..      ...+++..+..++.|++.||+|||+   .+|+||||||+|||++ ++.+||+|||+++.........
T Consensus        95 L~~~l~~------~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~  164 (343)
T 3dbq_A           95 LNSWLKK------KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV  164 (343)
T ss_dssp             HHHHHHH------SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------
T ss_pred             HHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCcccccc
Confidence            9999954      2568999999999999999999999   9999999999999997 5789999999998776544332


Q ss_pred             ccccccccccccCCccc-------------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcc
Q 039471          265 SRTAARGTSGYIAPELF-------------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQ  325 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~-------------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (363)
                      ......||+.|+|||++                   +||||||+++|||++|+.||........      .....+..  
T Consensus       165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------~~~~~~~~--  236 (343)
T 3dbq_A          165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS------KLHAIIDP--  236 (343)
T ss_dssp             -----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH------HHHHHHCT--
T ss_pred             cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH------HHHHHhcC--
Confidence            33456799999999985                   6999999999999999999975432111      11111111  


Q ss_pred             ccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          326 ELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       326 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                          ......+...+..+.+++.+||+.||++|||++|
T Consensus       237 ----~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e  270 (343)
T 3dbq_A          237 ----NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE  270 (343)
T ss_dssp             ----TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             ----CcccCCcccCCHHHHHHHHHHcCCChhHCCCHHH
Confidence                1111122223467899999999999999999854


No 127
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.7e-39  Score=294.43  Aligned_cols=243  Identities=18%  Similarity=0.231  Sum_probs=174.8

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ..++.+++|.++.+...  ++.||||++......   .+.+.+|++++++++|+||+++++++.+++..++||||+++++
T Consensus         9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   88 (311)
T 4agu_A            9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTV   88 (311)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred             eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCch
Confidence            34455555555554443  445999998654433   3567899999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++..      ...+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||++......... 
T Consensus        89 l~~~~~~------~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-  158 (311)
T 4agu_A           89 LHELDRY------QRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY-  158 (311)
T ss_dssp             HHHHHHT------SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             HHHHHhh------hcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc-
Confidence            9988742      3569999999999999999999999   99999999999999999999999999999876543322 


Q ss_pred             ccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHH-------HHHhhhccc--
Q 039471          265 SRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWI-------YNRMRLGQE--  326 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~--  326 (363)
                       .....||..|+|||++         +|+||||+++|||++|+.||................       .........  
T Consensus       159 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (311)
T 4agu_A          159 -YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS  237 (311)
T ss_dssp             --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred             -cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence             1345689999999976         799999999999999999997654432211100000       000000000  


Q ss_pred             -cccc-cCCC-----CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          327 -LCLD-FEED-----GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       327 -~~~~-~~~~-----~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       .... ....     .....+..+.+++.+||++||++|||++|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  281 (311)
T 4agu_A          238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQ  281 (311)
T ss_dssp             TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHH
T ss_pred             cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHH
Confidence             0000 0000     01235667999999999999999999864


No 128
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=3e-39  Score=290.00  Aligned_cols=235  Identities=25%  Similarity=0.349  Sum_probs=169.2

Q ss_pred             ccccccccCCcceeeccCCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHH
Q 039471          110 QSLISFNLTNSKFFFLHSNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~  186 (363)
                      ..++.+++|.++.... .+.||||+++.....   .+.|.+|+.++++++|+||+++++++ .....++||||+++++|.
T Consensus        30 ~~lG~G~~g~Vy~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~  107 (289)
T 3og7_A           30 QRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLY  107 (289)
T ss_dssp             EEEEECSSEEEEEEES-SSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHH
T ss_pred             eEecCCCCeEEEEEEE-cCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHH
Confidence            3345555555554443 345999999754433   35789999999999999999999965 456689999999999999


Q ss_pred             HHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccc
Q 039471          187 KFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSR  266 (363)
Q Consensus       187 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~  266 (363)
                      +++...     ...+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||++............
T Consensus       108 ~~l~~~-----~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  179 (289)
T 3og7_A          108 HHLHAS-----ETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF  179 (289)
T ss_dssp             HHHTTC--------CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC--------------
T ss_pred             HHHhhc-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceeccccccccccccc
Confidence            999433     3569999999999999999999999   99999999999999999999999999999876543322223


Q ss_pred             ccccccccccCCccc-----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          267 TAARGTSGYIAPELF-----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       267 ~~~~gt~~y~aPE~~-----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                      ....||..|+|||++           +|+||||+++|||++|+.||........       +......+...  ......
T Consensus       180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-------~~~~~~~~~~~--~~~~~~  250 (289)
T 3og7_A          180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-------IIEMVGRGSLS--PDLSKV  250 (289)
T ss_dssp             ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH-------HHHHHHHTSCC--CCTTSS
T ss_pred             cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH-------HHHHhcccccC--cchhhc
Confidence            445689999999976           6999999999999999999976433221       22222211111  111122


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...+++.+.+++.+||+.||++|||++|
T Consensus       251 ~~~~~~~l~~li~~~l~~~p~~Rps~~e  278 (289)
T 3og7_A          251 RSNCPKRMKRLMAECLKKKRDERPSFPR  278 (289)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             cccCCHHHHHHHHHHccCChhhCCCHHH
Confidence            3355678999999999999999999853


No 129
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=1.9e-39  Score=312.06  Aligned_cols=230  Identities=24%  Similarity=0.332  Sum_probs=183.2

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccC----CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHL----KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      .++.+++|.++.+...  ++.||||++...    ....+.+.+|+.++++++||||+++++++.+.+..++||||+.+++
T Consensus        33 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~  112 (484)
T 3nyv_A           33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE  112 (484)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             EEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCC
Confidence            3455555555544433  445999998643    3345789999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEE---cCCCCeeEeccccceeccCCc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL---DHNFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill---~~~~~~kl~Dfg~a~~~~~~~  261 (363)
                      |.+++..      ...+++..+..++.||+.||.|||+   .+|+||||||+|||+   +.++.+||+|||+++......
T Consensus       113 L~~~~~~------~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~  183 (484)
T 3nyv_A          113 LFDEIIS------RKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK  183 (484)
T ss_dssp             HHHHHHT------CSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred             HHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence            9999843      3569999999999999999999999   999999999999999   467889999999998776543


Q ss_pred             cccccccccccccccCCccc-------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCC
Q 039471          262 SIVSRTAARGTSGYIAPELF-------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEED  334 (363)
Q Consensus       262 ~~~~~~~~~gt~~y~aPE~~-------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                      ..   ....||+.|+|||++       +||||+|+++|+|++|+.||.......        +...+..+..   .....
T Consensus       184 ~~---~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~~~~---~~~~~  249 (484)
T 3nyv_A          184 KM---KDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYD--------ILKKVEKGKY---TFELP  249 (484)
T ss_dssp             SH---HHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCC---CCCSG
T ss_pred             cc---ccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHcCCC---CCCCc
Confidence            32   345689999999987       799999999999999999997654322        2222322211   11122


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ....+++.+.+++.+||+.+|++|||++|
T Consensus       250 ~~~~~s~~~~~li~~~L~~dp~~R~s~~e  278 (484)
T 3nyv_A          250 QWKKVSESAKDLIRKMLTYVPSMRISARD  278 (484)
T ss_dssp             GGGGSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ccccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            33456778999999999999999999753


No 130
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=3e-39  Score=298.99  Aligned_cols=183  Identities=23%  Similarity=0.284  Sum_probs=153.9

Q ss_pred             ccccccccCCcceeec--cCCeeEEEEcccCCcChhHHHHHHHHHhccC-----CCceeeeeeeeeeCCceeEEEeccCC
Q 039471          110 QSLISFNLTNSKFFFL--HSNEIAVKMLEHLKGNGQEFINEVATIGRIH-----HFHIVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      ..++.+++|.++.+..  .++.||||++.......+.+..|+.++++++     |+||+++++++...+..++||||+ +
T Consensus        41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~  119 (360)
T 3llt_A           41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-G  119 (360)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-C
T ss_pred             EEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-C
Confidence            3345555555555444  3444999999865555677888999999986     999999999999999999999999 8


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcC--------------------
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDH--------------------  242 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~--------------------  242 (363)
                      ++|.+++.....    ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.                    
T Consensus       120 ~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~  192 (360)
T 3llt_A          120 PSLYEIITRNNY----NGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ  192 (360)
T ss_dssp             CBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred             CCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccccchhccccccccc
Confidence            999999965432    459999999999999999999999   99999999999999975                    


Q ss_pred             -----CCCeeEeccccceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcch
Q 039471          243 -----NFQPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAV  305 (363)
Q Consensus       243 -----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~  305 (363)
                           ++.+||+|||+++......     ....||..|+|||++        +|||||||++|||++|+.||....
T Consensus       193 ~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  263 (360)
T 3llt_A          193 IYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE  263 (360)
T ss_dssp             EEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc
Confidence                 7889999999998755432     345689999999987        799999999999999999997654


No 131
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=2.8e-39  Score=308.52  Aligned_cols=239  Identities=21%  Similarity=0.242  Sum_probs=169.0

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC---cChhHHHHHHHHHhccCCCceeeeeeeeeeC------CceeEEEe
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK---GNGQEFINEVATIGRIHHFHIVRLLGFCSEG------NRRTLIYE  178 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~lv~e  178 (363)
                      ..++.+++|.+..+...  ++.||||++....   ...+++.+|+.++++++|+||+++++++...      ...++|||
T Consensus        68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E  147 (464)
T 3ttj_A           68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME  147 (464)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEE
T ss_pred             EEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEe
Confidence            34555555555444332  4449999997532   2346788999999999999999999998654      35799999


Q ss_pred             ccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceecc
Q 039471          179 FMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS  258 (363)
Q Consensus       179 ~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~  258 (363)
                      |+++ +|.+.+.        ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       148 ~~~~-~l~~~~~--------~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  215 (464)
T 3ttj_A          148 LMDA-NLCQVIQ--------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  215 (464)
T ss_dssp             CCSE-EHHHHHT--------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred             CCCC-CHHHHHh--------hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence            9975 5767662        348999999999999999999999   999999999999999999999999999998765


Q ss_pred             CCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccch--------HHHH-----
Q 039471          259 KDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYF--------PEWI-----  317 (363)
Q Consensus       259 ~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~--------~~~~-----  317 (363)
                      ....   .....||+.|+|||++        +|||||||++|||++|+.||.+.........+        +++.     
T Consensus       216 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~  292 (464)
T 3ttj_A          216 TSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP  292 (464)
T ss_dssp             -CCC---C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCH
T ss_pred             CCcc---cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcch
Confidence            5432   2445689999999997        79999999999999999999765432211000        0000     


Q ss_pred             --HHHhhhccc-c-----------ccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          318 --YNRMRLGQE-L-----------CLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       318 --~~~~~~~~~-~-----------~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                        ...+..... .           ............++++.+|+.+||++||++|||++|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e  352 (464)
T 3ttj_A          293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD  352 (464)
T ss_dssp             HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHH
Confidence              000000000 0           000001112234678999999999999999999864


No 132
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=5.2e-39  Score=291.96  Aligned_cols=240  Identities=22%  Similarity=0.265  Sum_probs=174.4

Q ss_pred             ccccccCCcceeec--cCCeeEEEEcccCC-cChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCCCCHHH
Q 039471          112 LISFNLTNSKFFFL--HSNEIAVKMLEHLK-GNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQK  187 (363)
Q Consensus       112 ~~~~~~~~~~~~~~--~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~  187 (363)
                      ++.+++|.++.+..  .++.||||++.... ...+.+.+|++++.++ +|+||+++++++.+++..++||||+++++|.+
T Consensus        21 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~  100 (316)
T 2ac3_A           21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILS  100 (316)
T ss_dssp             CCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHH
T ss_pred             ecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHH
Confidence            45555555544432  34459999997543 3457899999999985 79999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCC---eeEeccccceeccCCcc--
Q 039471          188 FIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ---PKISDFGLAKLCSKDIS--  262 (363)
Q Consensus       188 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~---~kl~Dfg~a~~~~~~~~--  262 (363)
                      ++...      ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.   +||+|||++........  
T Consensus       101 ~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~  171 (316)
T 2ac3_A          101 HIHKR------RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS  171 (316)
T ss_dssp             HHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------
T ss_pred             HHhcc------CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc
Confidence            99543      468999999999999999999999   99999999999999998766   99999999876543211  


Q ss_pred             ---ccccccccccccccCCccc-------------cCceehhHHHHHHhcCCCCCCcchhcccccc-------hHHHHHH
Q 039471          263 ---IVSRTAARGTSGYIAPELF-------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIY-------FPEWIYN  319 (363)
Q Consensus       263 ---~~~~~~~~gt~~y~aPE~~-------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~-------~~~~~~~  319 (363)
                         ........||..|+|||++             +||||||+++|||++|+.||...........       ....+..
T Consensus       172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  251 (316)
T 2ac3_A          172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE  251 (316)
T ss_dssp             ----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHH
T ss_pred             cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHH
Confidence               0111234589999999986             6999999999999999999976543221100       0111222


Q ss_pred             HhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          320 RMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .+..+...   .........+..+.+++.+||+.||++|||++|
T Consensus       252 ~i~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e  292 (316)
T 2ac3_A          252 SIQEGKYE---FPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQ  292 (316)
T ss_dssp             HHHHCCCC---CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHhccCcc---cCchhcccCCHHHHHHHHHHhhCChhhCCCHHH
Confidence            22222110   000011234678999999999999999999864


No 133
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=1.8e-39  Score=294.60  Aligned_cols=233  Identities=19%  Similarity=0.284  Sum_probs=169.6

Q ss_pred             ccccccccCCcceeec--cCCeeEEEEcccCCcC----hhHHHHHHHHHhccCCCceeeeeeeeeeCCc----eeEEEec
Q 039471          110 QSLISFNLTNSKFFFL--HSNEIAVKMLEHLKGN----GQEFINEVATIGRIHHFHIVRLLGFCSEGNR----RTLIYEF  179 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~~lv~e~  179 (363)
                      ..++.+++|.++.+..  .++.||||++......    .+.+.+|+.++++++|+||+++++++.....    .++||||
T Consensus        18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~   97 (311)
T 3ork_A           18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY   97 (311)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             EEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEec
Confidence            3345555555554442  3445999999754322    2468899999999999999999999876543    4999999


Q ss_pred             cCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccC
Q 039471          180 MPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSK  259 (363)
Q Consensus       180 ~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~  259 (363)
                      +++++|.+++...      ..+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        98 ~~g~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~  168 (311)
T 3ork_A           98 VDGVTLRDIVHTE------GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIAD  168 (311)
T ss_dssp             CCEEEHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred             CCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence            9999999999543      468999999999999999999999   9999999999999999999999999999987654


Q ss_pred             Cccc-cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccc
Q 039471          260 DISI-VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLD  330 (363)
Q Consensus       260 ~~~~-~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (363)
                      .... .......||..|+|||++        +|+||||+++|||++|+.||........       ............  
T Consensus       169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-------~~~~~~~~~~~~--  239 (311)
T 3ork_A          169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-------AYQHVREDPIPP--  239 (311)
T ss_dssp             -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-------HHHHHHCCCCCH--
T ss_pred             cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-------HHHHhcCCCCCc--
Confidence            3221 122345689999999987        7999999999999999999976543221       111111111100  


Q ss_pred             cCCCCcHHHHHHHHHHHHHhccCCCCCCCCCC
Q 039471          331 FEEDGDEGIARKLAIVAIWCIQWNPTERPSMP  362 (363)
Q Consensus       331 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~  362 (363)
                        ......++..+.+++.+||+.||++||+..
T Consensus       240 --~~~~~~~~~~l~~li~~~l~~dP~~R~~~~  269 (311)
T 3ork_A          240 --SARHEGLSADLDAVVLKALAKNPENRYQTA  269 (311)
T ss_dssp             --HHHSTTCCHHHHHHHHHHTCSSGGGSCSSH
T ss_pred             --ccccCCCCHHHHHHHHHHHhcCHhhChhhH
Confidence              001123567799999999999999999864


No 134
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-39  Score=300.89  Aligned_cols=230  Identities=20%  Similarity=0.202  Sum_probs=179.6

Q ss_pred             ccccccccCCcceeec-----cCCeeEEEEcccC-----CcChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEe
Q 039471          110 QSLISFNLTNSKFFFL-----HSNEIAVKMLEHL-----KGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYE  178 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~-----~~~~vAvK~~~~~-----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e  178 (363)
                      ..++.+++|.++.+..     .++.||||+++..     ....+.+.+|+.+++++ +|+||+++++++......++|||
T Consensus        60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e  139 (355)
T 1vzo_A           60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILD  139 (355)
T ss_dssp             EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEEC
T ss_pred             EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEee
Confidence            3345556665555443     3455999998642     23446778899999999 69999999999999999999999


Q ss_pred             ccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceecc
Q 039471          179 FMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS  258 (363)
Q Consensus       179 ~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~  258 (363)
                      |+++++|.+++...      ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       140 ~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~  210 (355)
T 1vzo_A          140 YINGGELFTHLSQR------ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV  210 (355)
T ss_dssp             CCCSCBHHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             cCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence            99999999999543      468999999999999999999999   999999999999999999999999999998765


Q ss_pred             CCccccccccccccccccCCccc----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccc
Q 039471          259 KDISIVSRTAARGTSGYIAPELF----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELC  328 (363)
Q Consensus       259 ~~~~~~~~~~~~gt~~y~aPE~~----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (363)
                      ..... ......||..|+|||++          +||||||+++|||++|+.||..........    .+...+...    
T Consensus       211 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~----~~~~~~~~~----  281 (355)
T 1vzo_A          211 ADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA----EISRRILKS----  281 (355)
T ss_dssp             GGGGG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHH----HHHHHHHHC----
T ss_pred             cCCCC-cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHH----HHHHHHhcc----
Confidence            43322 12345689999999986          699999999999999999997654332211    111111111    


Q ss_pred             cccCCCCcHHHHHHHHHHHHHhccCCCCCCCC
Q 039471          329 LDFEEDGDEGIARKLAIVAIWCIQWNPTERPS  360 (363)
Q Consensus       329 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs  360 (363)
                         ....+..++..+.+++.+||+.||++||+
T Consensus       282 ---~~~~~~~~~~~~~~li~~~L~~dP~~R~~  310 (355)
T 1vzo_A          282 ---EPPYPQEMSALAKDLIQRLLMKDPKKRLG  310 (355)
T ss_dssp             ---CCCCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred             ---CCCCCcccCHHHHHHHHHHhhhCHHHhcC
Confidence               11223445677999999999999999993


No 135
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.8e-39  Score=298.59  Aligned_cols=240  Identities=20%  Similarity=0.204  Sum_probs=176.9

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccC------CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHL------KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMP  181 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  181 (363)
                      ..++.+++|.++.+...  +..||+|++...      ....+.+.+|++++++++|+||+++++++.+.+..++||||++
T Consensus        32 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~  111 (345)
T 3hko_A           32 GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCH  111 (345)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             ceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCC
Confidence            34455566555554433  334999998632      2344689999999999999999999999999999999999999


Q ss_pred             CCCHHHHhhhcCCC----------------------------------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 039471          182 NGSLQKFIFSKTNS----------------------------------SSHRQLSWEKLRKIAFGVARGVEYLHQGCNQR  227 (363)
Q Consensus       182 ~~sL~~~l~~~~~~----------------------------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~  227 (363)
                      +++|.+++......                                  .....+++..++.++.|++.||+|||+   .+
T Consensus       112 gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~  188 (345)
T 3hko_A          112 GGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QG  188 (345)
T ss_dssp             SCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             CCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CC
Confidence            99999998421100                                  001235678899999999999999999   99


Q ss_pred             ceecCCCCCceEEcCCC--CeeEeccccceeccCCcc--ccccccccccccccCCccc----------cCceehhHHHHH
Q 039471          228 ILHFDIKPHNILLDHNF--QPKISDFGLAKLCSKDIS--IVSRTAARGTSGYIAPELF----------SRNFCYGMMLLE  293 (363)
Q Consensus       228 i~H~dikp~Nill~~~~--~~kl~Dfg~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~----------~Di~slG~il~e  293 (363)
                      |+||||||+|||++.++  .+||+|||+++.......  ........||+.|+|||++          +||||||+++||
T Consensus       189 ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~e  268 (345)
T 3hko_A          189 ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL  268 (345)
T ss_dssp             EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHH
T ss_pred             ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHH
Confidence            99999999999998766  899999999987644221  1112445689999999976          799999999999


Q ss_pred             HhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          294 MVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       294 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      |++|+.||........       . ..+.....   ..........++.+.+++.+||+.||++|||++|
T Consensus       269 l~~g~~pf~~~~~~~~-------~-~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  327 (345)
T 3hko_A          269 LLMGAVPFPGVNDADT-------I-SQVLNKKL---CFENPNYNVLSPLARDLLSNLLNRNVDERFDAMR  327 (345)
T ss_dssp             HHHSSCSSCCSSHHHH-------H-HHHHHCCC---CTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             HHHCCCCCCCCChHHH-------H-HHHHhccc---ccCCcccccCCHHHHHHHHHHcCCChhHCCCHHH
Confidence            9999999976543221       1 11111111   1111222345678999999999999999999753


No 136
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=7.3e-39  Score=285.71  Aligned_cols=227  Identities=25%  Similarity=0.335  Sum_probs=165.3

Q ss_pred             ccccccCCcceeec--cCCeeEEEEcccC----CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          112 LISFNLTNSKFFFL--HSNEIAVKMLEHL----KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       112 ~~~~~~~~~~~~~~--~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ++.+++|.++.+..  .++.||||++...    ....+.+.+|+.++++++|+||+++++++.+.+..++||||+++++|
T Consensus        19 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   98 (278)
T 3cok_A           19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEM   98 (278)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEH
T ss_pred             ecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcH
Confidence            45555555554443  3445999998632    23347889999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      .+++...     ...+++..++.++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++.........  
T Consensus        99 ~~~l~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~--  168 (278)
T 3cok_A           99 NRYLKNR-----VKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK--  168 (278)
T ss_dssp             HHHHHTC-----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC-------
T ss_pred             HHHHhhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCc--
Confidence            9999533     2568999999999999999999999   99999999999999999999999999999876533221  


Q ss_pred             cccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcH
Q 039471          266 RTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDE  337 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (363)
                      .....||..|+|||++        +|+||||+++|||++|+.||........        .......       ....+.
T Consensus       169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~~~~~~~-------~~~~~~  233 (278)
T 3cok_A          169 HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT--------LNKVVLA-------DYEMPS  233 (278)
T ss_dssp             -----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCSS-------CCCCCT
T ss_pred             ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH--------HHHHhhc-------ccCCcc
Confidence            1334589999999987        8999999999999999999976432211        0111100       111233


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          338 GIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       338 ~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+..+.+++.+||+.||++|||++|
T Consensus       234 ~~~~~~~~li~~~l~~dp~~Rps~~~  259 (278)
T 3cok_A          234 FLSIEAKDLIHQLLRRNPADRLSLSS  259 (278)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             ccCHHHHHHHHHHcccCHhhCCCHHH
Confidence            45678999999999999999999753


No 137
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.9e-39  Score=303.29  Aligned_cols=229  Identities=20%  Similarity=0.247  Sum_probs=178.7

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccC----CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHL----KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ..++.+++|.+..+...  ++.||||++...    ....+.+.+|..++.+++|+||+++++++.+.+..++||||+++|
T Consensus        67 ~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg  146 (412)
T 2vd5_A           67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGG  146 (412)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCC
Confidence            34566666666655543  445999999642    223356889999999999999999999999999999999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++....     ..+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++........
T Consensus       147 ~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~  218 (412)
T 2vd5_A          147 DLLTLLSKFG-----ERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV  218 (412)
T ss_dssp             BHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE
T ss_pred             cHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhheeccCCCcc
Confidence            9999996432     469999999999999999999999   99999999999999999999999999999887654332


Q ss_pred             cccccccccccccCCccc---------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcc-cc
Q 039471          264 VSRTAARGTSGYIAPELF---------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQ-EL  327 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~---------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  327 (363)
                       ......||+.|+|||++               +|+|||||++|||++|+.||.......        .+..+.... ..
T Consensus       219 -~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~--------~~~~i~~~~~~~  289 (412)
T 2vd5_A          219 -RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE--------TYGKIVHYKEHL  289 (412)
T ss_dssp             -ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHTHHHHC
T ss_pred             -ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH--------HHHHHHhcccCc
Confidence             12345799999999975               699999999999999999997654322        222222111 11


Q ss_pred             ccccCCCCcHHHHHHHHHHHHHhccCCCCCCC
Q 039471          328 CLDFEEDGDEGIARKLAIVAIWCIQWNPTERP  359 (363)
Q Consensus       328 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RP  359 (363)
                      ..   +.....+++++.+++.+||+ +|++|+
T Consensus       290 ~~---p~~~~~~s~~~~dli~~lL~-~p~~Rl  317 (412)
T 2vd5_A          290 SL---PLVDEGVPEEARDFIQRLLC-PPETRL  317 (412)
T ss_dssp             CC---C----CCCHHHHHHHHTTSS-CGGGCT
T ss_pred             CC---CccccCCCHHHHHHHHHHcC-ChhhcC
Confidence            10   11223467789999999999 999995


No 138
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.1e-39  Score=288.80  Aligned_cols=229  Identities=24%  Similarity=0.385  Sum_probs=179.5

Q ss_pred             ccccccCCcceeec----cCCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          112 LISFNLTNSKFFFL----HSNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       112 ~~~~~~~~~~~~~~----~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ++.+++|.++.+..    .+..||||++....  ...+++.+|++++++++|+||+++++++ .....++||||+++++|
T Consensus        18 lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L   96 (287)
T 1u59_A           18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL   96 (287)
T ss_dssp             EECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEH
T ss_pred             ccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCH
Confidence            45556665555432    23349999997543  2346789999999999999999999999 45678999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc-
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV-  264 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-  264 (363)
                      .+++...     ...+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++.......... 
T Consensus        97 ~~~l~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  168 (287)
T 1u59_A           97 HKFLVGK-----REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT  168 (287)
T ss_dssp             HHHHTTC-----TTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred             HHHHHhC-----CccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence            9999532     2569999999999999999999999   999999999999999999999999999998876443321 


Q ss_pred             ccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          265 SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                      ......+|..|+|||++        +|+||||+++|||++ |+.||.......        +...+..+..      ...
T Consensus       169 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--------~~~~i~~~~~------~~~  234 (287)
T 1u59_A          169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--------VMAFIEQGKR------MEC  234 (287)
T ss_dssp             CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--------HHHHHHTTCC------CCC
T ss_pred             ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--------HHHHHhcCCc------CCC
Confidence            12334568899999987        899999999999998 999987543221        2222222221      122


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +..+++.+.+++.+||+.||++|||++|
T Consensus       235 ~~~~~~~l~~li~~~l~~~p~~Rps~~~  262 (287)
T 1u59_A          235 PPECPPELYALMSDCWIYKWEDRPDFLT  262 (287)
T ss_dssp             CTTCCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred             CCCcCHHHHHHHHHHcCCChhhCcCHHH
Confidence            3456678999999999999999999853


No 139
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=8.6e-39  Score=288.59  Aligned_cols=238  Identities=22%  Similarity=0.383  Sum_probs=178.5

Q ss_pred             ccccccCCcceeec------cCCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeC--CceeEEEeccC
Q 039471          112 LISFNLTNSKFFFL------HSNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEG--NRRTLIYEFMP  181 (363)
Q Consensus       112 ~~~~~~~~~~~~~~------~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~  181 (363)
                      ++.+++|.++.+.+      .++.||||++....  ...+.+.+|+.++++++|+||+++++++...  ...++||||++
T Consensus        29 lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~  108 (302)
T 4e5w_A           29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP  108 (302)
T ss_dssp             EEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCT
T ss_pred             cCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCC
Confidence            44455555444432      23449999987432  3447899999999999999999999999776  67899999999


Q ss_pred             CCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCc
Q 039471          182 NGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       182 ~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~  261 (363)
                      +++|.+++....     ..+++..++.++.|++.||+|||+   .+|+|+||||+||+++.++.+||+|||++.......
T Consensus       109 ~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  180 (302)
T 4e5w_A          109 SGSLKEYLPKNK-----NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK  180 (302)
T ss_dssp             TCBHHHHHHHHT-----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred             CCcHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccccccccCCC
Confidence            999999995443     458999999999999999999999   999999999999999999999999999998876543


Q ss_pred             cc-cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhccc-------ccchHHHHHHHhhhcc
Q 039471          262 SI-VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQS-------QIYFPEWIYNRMRLGQ  325 (363)
Q Consensus       262 ~~-~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~  325 (363)
                      .. .......+|..|+|||++        +|+||||+++|||++|..|+........       .......+...+..+.
T Consensus       181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (302)
T 4e5w_A          181 EYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK  260 (302)
T ss_dssp             CEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTC
T ss_pred             cceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccC
Confidence            32 122445688889999987        8999999999999999988654322110       0001111112222111


Q ss_pred             ccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          326 ELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       326 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                            ....+..+++.+.+++.+||+.||++|||++|
T Consensus       261 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  292 (302)
T 4e5w_A          261 ------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQN  292 (302)
T ss_dssp             ------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred             ------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHH
Confidence                  12233456678999999999999999999864


No 140
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=3.1e-39  Score=292.43  Aligned_cols=231  Identities=25%  Similarity=0.375  Sum_probs=174.1

Q ss_pred             ccccccccCCcceeeccCCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHHHh
Q 039471          110 QSLISFNLTNSKFFFLHSNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKFI  189 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l  189 (363)
                      ..++.+++|.++.+...++.||||++... ...+.|.+|+.++++++|+||+++++++.+  ..++||||+++++|.+++
T Consensus        14 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~L~~~l   90 (307)
T 2eva_A           14 EVVGRGAFGVVCKAKWRAKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVL   90 (307)
T ss_dssp             EEEECCSSSEEEEEEETTEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCBHHHHH
T ss_pred             eEeecCCCceEEEEEECCeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCCHHHHH
Confidence            44567777777776667777999999643 345789999999999999999999998874  478999999999999999


Q ss_pred             hhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCC-eeEeccccceeccCCcccccccc
Q 039471          190 FSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ-PKISDFGLAKLCSKDISIVSRTA  268 (363)
Q Consensus       190 ~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~-~kl~Dfg~a~~~~~~~~~~~~~~  268 (363)
                      ....   ....+++..+..++.|+++||+|||+....+|+||||||+|||++.++. +||+|||++.......     ..
T Consensus        91 ~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~-----~~  162 (307)
T 2eva_A           91 HGAE---PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM-----TN  162 (307)
T ss_dssp             HCSS---SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------------
T ss_pred             hccC---CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc-----cc
Confidence            6432   1245889999999999999999999843358999999999999998887 7999999997654322     23


Q ss_pred             ccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHH
Q 039471          269 ARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIA  340 (363)
Q Consensus       269 ~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (363)
                      ..||..|+|||++        +||||||+++|||++|+.||........     . +......+.      .......++
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----~-~~~~~~~~~------~~~~~~~~~  230 (307)
T 2eva_A          163 NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF-----R-IMWAVHNGT------RPPLIKNLP  230 (307)
T ss_dssp             --CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH-----H-HHHHHHTTC------CCCCBTTCC
T ss_pred             CCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH-----H-HHHHHhcCC------CCCcccccC
Confidence            4589999999987        8999999999999999999975432211     0 111111111      112233456


Q ss_pred             HHHHHHHHHhccCCCCCCCCCCC
Q 039471          341 RKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       341 ~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+.+++.+||+.||++|||++|
T Consensus       231 ~~l~~li~~~l~~dp~~Rps~~e  253 (307)
T 2eva_A          231 KPIESLMTRCWSKDPSQRPSMEE  253 (307)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHHhcCChhhCcCHHH
Confidence            77999999999999999999853


No 141
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=3.3e-39  Score=288.16  Aligned_cols=225  Identities=22%  Similarity=0.326  Sum_probs=176.1

Q ss_pred             cccccccCCcceeeccCC--eeEEEEcccC----CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          111 SLISFNLTNSKFFFLHSN--EIAVKMLEHL----KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~--~vAvK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      .++.+++|.++.+....+  .||||++...    ....+.+.+|+.++++++|+||+++++++.+....++||||+++++
T Consensus        16 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   95 (279)
T 3fdn_A           16 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT   95 (279)
T ss_dssp             EEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEE
T ss_pred             EEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCc
Confidence            345555555555544333  4999998532    2344678899999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++...      ..+++..+..++.|++.||+|||+   .+|+|+||||+||+++.++.+||+|||++........  
T Consensus        96 l~~~l~~~------~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~--  164 (279)
T 3fdn_A           96 VYRELQKL------SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--  164 (279)
T ss_dssp             HHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC-------
T ss_pred             HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCcccc--
Confidence            99999543      458999999999999999999999   9999999999999999999999999999866543322  


Q ss_pred             ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          265 SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                        ....|+..|+|||++        +|+||||+++|||++|+.||.......        ....+....       ...+
T Consensus       165 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~-------~~~~  227 (279)
T 3fdn_A          165 --TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE--------TYKRISRVE-------FTFP  227 (279)
T ss_dssp             -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHHTC-------CCCC
T ss_pred             --cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH--------HHHHHHhCC-------CCCC
Confidence              345689999999987        799999999999999999997543221        122222111       1122


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...+..+.+++.+||+.||++|||++|
T Consensus       228 ~~~~~~~~~li~~~l~~~p~~Rps~~e  254 (279)
T 3fdn_A          228 DFVTEGARDLISRLLKHNPSQRPMLRE  254 (279)
T ss_dssp             TTSCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             CcCCHHHHHHHHHHhccChhhCCCHHH
Confidence            335677899999999999999999864


No 142
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=7.6e-39  Score=287.42  Aligned_cols=227  Identities=25%  Similarity=0.339  Sum_probs=175.9

Q ss_pred             ccccccCCcceeeccC--CeeEEEEcccCCc---ChhHHHHHHHHHhccCCCceeeeeeeeee----CCceeEEEeccCC
Q 039471          112 LISFNLTNSKFFFLHS--NEIAVKMLEHLKG---NGQEFINEVATIGRIHHFHIVRLLGFCSE----GNRRTLIYEFMPN  182 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~~--~~vAvK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~  182 (363)
                      ++.+++|.++.+....  ..||+|++.....   ..+.+.+|+.++++++|+||+++++++..    +...++||||+++
T Consensus        34 lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~  113 (290)
T 1t4h_A           34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTS  113 (290)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCS
T ss_pred             ccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCC
Confidence            5566666665554433  3399999864332   33578899999999999999999999865    3568999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--ceecCCCCCceEEc-CCCCeeEeccccceeccC
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQR--ILHFDIKPHNILLD-HNFQPKISDFGLAKLCSK  259 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~dikp~Nill~-~~~~~kl~Dfg~a~~~~~  259 (363)
                      ++|.+++...      ..+++..++.++.|++.||.|||+   .+  ++|+||||+|||++ .++.+||+|||++.....
T Consensus       114 ~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~  184 (290)
T 1t4h_A          114 GTLKTYLKRF------KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             CBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             CCHHHHHHHc------cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence            9999999543      468999999999999999999999   88  99999999999998 789999999999976544


Q ss_pred             CccccccccccccccccCCccc-------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccC
Q 039471          260 DISIVSRTAARGTSGYIAPELF-------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFE  332 (363)
Q Consensus       260 ~~~~~~~~~~~gt~~y~aPE~~-------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (363)
                      ...    ....||..|+|||++       +|+||||+++|+|++|+.||........       ....+..+...     
T Consensus       185 ~~~----~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-------~~~~~~~~~~~-----  248 (290)
T 1t4h_A          185 SFA----KAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-------IYRRVTSGVKP-----  248 (290)
T ss_dssp             TSB----EESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-------HHHHHTTTCCC-----
T ss_pred             ccc----ccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH-------HHHHHhccCCc-----
Confidence            322    344689999999987       7999999999999999999975433211       22222222111     


Q ss_pred             CCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          333 EDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       333 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...+...++.+.+++.+||+.||++|||++|
T Consensus       249 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e  279 (290)
T 1t4h_A          249 ASFDKVAIPEVKEIIEGCIRQNKDERYSIKD  279 (290)
T ss_dssp             GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             cccCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence            1112223467999999999999999999864


No 143
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=4.3e-39  Score=292.96  Aligned_cols=237  Identities=22%  Similarity=0.333  Sum_probs=178.3

Q ss_pred             cccccccCCcceeec------cCCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeC--CceeEEEecc
Q 039471          111 SLISFNLTNSKFFFL------HSNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEG--NRRTLIYEFM  180 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~------~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~  180 (363)
                      .++.+++|.++.+.+      .++.||||++....  ...+.+.+|++++++++|+||+++++++.+.  ...++||||+
T Consensus        38 ~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~  117 (318)
T 3lxp_A           38 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV  117 (318)
T ss_dssp             EEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCC
T ss_pred             eecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecc
Confidence            345555555543322      23449999997543  2245789999999999999999999999874  5789999999


Q ss_pred             CCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCC
Q 039471          181 PNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD  260 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~  260 (363)
                      ++++|.+++..       ..+++..++.++.|++.||+|||+   .+|+|+||||+||+++.++.+||+|||++......
T Consensus       118 ~~~~L~~~l~~-------~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  187 (318)
T 3lxp_A          118 PLGSLRDYLPR-------HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG  187 (318)
T ss_dssp             TTCBHHHHGGG-------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred             cCCcHHHHHhh-------CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence            99999999942       348999999999999999999999   99999999999999999999999999999987654


Q ss_pred             ccc-cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccc---cchH----HHHHHHhhhc
Q 039471          261 ISI-VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQ---IYFP----EWIYNRMRLG  324 (363)
Q Consensus       261 ~~~-~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~---~~~~----~~~~~~~~~~  324 (363)
                      ... .......+|..|+|||++        +|+||||+++|||++|+.||.........   ....    ..+...+..+
T Consensus       188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (318)
T 3lxp_A          188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG  267 (318)
T ss_dssp             CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred             ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence            332 122345578889999988        79999999999999999998754322100   0000    0011111111


Q ss_pred             cccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          325 QELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                            .....+..++..+.+++.+||+.||++|||++|
T Consensus       268 ------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~e  300 (318)
T 3lxp_A          268 ------ERLPRPDKCPAEVYHLMKNCWETEASFRPTFEN  300 (318)
T ss_dssp             ------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ------cCCCCCccccHHHHHHHHHHcCCCcccCcCHHH
Confidence                  122234456678999999999999999999864


No 144
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1e-38  Score=292.39  Aligned_cols=232  Identities=23%  Similarity=0.358  Sum_probs=174.4

Q ss_pred             ccccccccCCcceeeccCC------eeEEEEcccCCc--ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccC
Q 039471          110 QSLISFNLTNSKFFFLHSN------EIAVKMLEHLKG--NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMP  181 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~------~vAvK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  181 (363)
                      ..++.+++|.++.+.....      .||||++.....  ...++.+|+.++++++|+||+++++++.+.+..++||||++
T Consensus        50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  129 (333)
T 1mqb_A           50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYME  129 (333)
T ss_dssp             EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCC
Confidence            3456666666665544322      299999974332  23578899999999999999999999999999999999999


Q ss_pred             CCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCc
Q 039471          182 NGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       182 ~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~  261 (363)
                      +++|.+++....     ..+++..++.++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++......
T Consensus       130 ~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~  201 (333)
T 1mqb_A          130 NGALDKFLREKD-----GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  201 (333)
T ss_dssp             TEEHHHHHHHTT-----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred             CCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence            999999996432     569999999999999999999999   999999999999999999999999999998765432


Q ss_pred             cc-cccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhcccccccc
Q 039471          262 SI-VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDF  331 (363)
Q Consensus       262 ~~-~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (363)
                      .. .......+|..|+|||++        +|+||||+++|||++ |+.||.......        +...+..+..     
T Consensus       202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--------~~~~~~~~~~-----  268 (333)
T 1mqb_A          202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--------VMKAINDGFR-----  268 (333)
T ss_dssp             ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTTCC-----
T ss_pred             ccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--------HHHHHHCCCc-----
Confidence            21 111233467889999987        799999999999998 999986543221        2222222211     


Q ss_pred             CCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          332 EEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       332 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       ...+..++..+.+++.+||+.+|++|||++|
T Consensus       269 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~  299 (333)
T 1mqb_A          269 -LPTPMDCPSAIYQLMMQCWQQERARRPKFAD  299 (333)
T ss_dssp             -CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             -CCCcccCCHHHHHHHHHHcCCChhhCcCHHH
Confidence             1223345677999999999999999999753


No 145
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=7.5e-39  Score=305.77  Aligned_cols=178  Identities=22%  Similarity=0.334  Sum_probs=136.2

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeee-----CCceeEEEec
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSE-----GNRRTLIYEF  179 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~lv~e~  179 (363)
                      ..++.+++|.+..+...  ++.||||++......   .+++.+|++++++++|+||+++++++..     ....++||||
T Consensus        59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~  138 (458)
T 3rp9_A           59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEI  138 (458)
T ss_dssp             CC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECC
T ss_pred             eEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEec
Confidence            44556666665555333  445999998653322   3578899999999999999999999843     3578999999


Q ss_pred             cCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccC
Q 039471          180 MPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSK  259 (363)
Q Consensus       180 ~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~  259 (363)
                      +. ++|.+++..      ...+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       139 ~~-~~L~~~~~~------~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  208 (458)
T 3rp9_A          139 AD-SDFKKLFRT------PVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDY  208 (458)
T ss_dssp             CS-EEHHHHHHS------SCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred             cc-cchhhhccc------CCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence            84 699999842      3569999999999999999999999   9999999999999999999999999999987653


Q ss_pred             Cccc-------------------------cccccccccccccCCccc---------cCceehhHHHHHHhcC
Q 039471          260 DISI-------------------------VSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGC  297 (363)
Q Consensus       260 ~~~~-------------------------~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g  297 (363)
                      ....                         .......||+.|+|||++         +|||||||++|||++|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            2110                         112345689999999975         7999999999999993


No 146
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=3e-39  Score=319.01  Aligned_cols=228  Identities=23%  Similarity=0.394  Sum_probs=176.2

Q ss_pred             ccccccCCcceeecc----CCeeEEEEcccCCc---ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          112 LISFNLTNSKFFFLH----SNEIAVKMLEHLKG---NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~----~~~vAvK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ++.+++|.++.....    +..||||+++....   ..+++.+|+.++++++|+||+++++++.. ...++||||+++|+
T Consensus       377 LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g~  455 (635)
T 4fl3_A          377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGP  455 (635)
T ss_dssp             EEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEE
T ss_pred             eccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCCC
Confidence            556666666554332    23499999975432   24689999999999999999999999865 45889999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc-
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI-  263 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-  263 (363)
                      |.+++..      ...+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++....+... 
T Consensus       456 L~~~l~~------~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~  526 (635)
T 4fl3_A          456 LNKYLQQ------NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY  526 (635)
T ss_dssp             HHHHHHH------CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred             HHHHHhh------CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence            9999953      2568999999999999999999999   99999999999999999999999999999877554322 


Q ss_pred             cccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCC
Q 039471          264 VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEED  334 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                      .......+|..|+|||++        +||||||+++|||++ |+.||.......        +...+..+...      .
T Consensus       527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--------~~~~i~~~~~~------~  592 (635)
T 4fl3_A          527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--------VTAMLEKGERM------G  592 (635)
T ss_dssp             --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--------HHHHHHTTCCC------C
T ss_pred             ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCCC------C
Confidence            112334567889999988        899999999999998 999997654322        23333333221      2


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .+..+++++.+++.+||+.||++|||++|
T Consensus       593 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~  621 (635)
T 4fl3_A          593 CPAGCPREMYDLMNLCWTYDVENRPGFAA  621 (635)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCHhHCcCHHH
Confidence            23456678999999999999999999853


No 147
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=8.8e-39  Score=287.21  Aligned_cols=228  Identities=24%  Similarity=0.400  Sum_probs=175.9

Q ss_pred             ccccccCCcceeecc----CCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          112 LISFNLTNSKFFFLH----SNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~----~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ++.+++|.++.+...    ++.||||++......   .+++.+|+.++++++|+||+++++++ .....++||||+++++
T Consensus        25 lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~  103 (291)
T 1xbb_A           25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGP  103 (291)
T ss_dssp             EEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEE
T ss_pred             cccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCC
Confidence            455556555554322    234999999754322   46789999999999999999999999 5677899999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++...      ..+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++..........
T Consensus       104 L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  174 (291)
T 1xbb_A          104 LNKYLQQN------RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY  174 (291)
T ss_dssp             HHHHHHHC------TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred             HHHHHHhC------cCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcc
Confidence            99999542      458999999999999999999999   999999999999999999999999999998876543321


Q ss_pred             c-cccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCC
Q 039471          265 S-RTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEED  334 (363)
Q Consensus       265 ~-~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                      . .....++..|+|||.+        +|+||||+++|||++ |+.||.......        +...+..+..      ..
T Consensus       175 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~------~~  240 (291)
T 1xbb_A          175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--------VTAMLEKGER------MG  240 (291)
T ss_dssp             EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--------HHHHHHTTCC------CC
T ss_pred             cccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--------HHHHHHcCCC------CC
Confidence            1 2234467889999987        899999999999999 999987643321        2222222221      12


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .+..+++.+.+++.+||+.||++|||++|
T Consensus       241 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~  269 (291)
T 1xbb_A          241 CPAGCPREMYDLMNLCWTYDVENRPGFAA  269 (291)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            23456678999999999999999999853


No 148
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=5.2e-39  Score=293.56  Aligned_cols=231  Identities=21%  Similarity=0.321  Sum_probs=178.2

Q ss_pred             ccccccCCcceeecc--CCeeEEEEcccCC---cChhHHHHHHHHHhccC-CCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          112 LISFNLTNSKFFFLH--SNEIAVKMLEHLK---GNGQEFINEVATIGRIH-HFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~--~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ++.+++|.++.+...  ++.||||++....   ....++.+|+.++.++. |+||+++++++.+....++||||+++++|
T Consensus        37 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L  116 (327)
T 3lm5_A           37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEI  116 (327)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEG
T ss_pred             eCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcH
Confidence            556666665555443  4559999987432   33468899999999995 69999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcC---CCCeeEeccccceeccCCcc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDH---NFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~---~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      .+++....    ...+++..++.++.|++.||+|||+   .+|+||||||+|||++.   ++.+||+|||+++.......
T Consensus       117 ~~~~~~~~----~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~  189 (327)
T 3lm5_A          117 FSLCLPEL----AEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE  189 (327)
T ss_dssp             GGGGSSCC-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-----
T ss_pred             HHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccc
Confidence            99984322    2679999999999999999999999   99999999999999997   78999999999988765433


Q ss_pred             ccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCC
Q 039471          263 IVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEED  334 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                      .   ....||+.|+|||++        +|+||||+++|||++|+.||........        ...+...   .......
T Consensus       190 ~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--------~~~i~~~---~~~~~~~  255 (327)
T 3lm5_A          190 L---REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET--------YLNISQV---NVDYSEE  255 (327)
T ss_dssp             -------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--------HHHHHHT---CCCCCTT
T ss_pred             c---ccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--------HHHHHhc---ccccCch
Confidence            2   345689999999987        7999999999999999999976543221        1111111   1112222


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .....++.+.+++.+||+.||++|||++|
T Consensus       256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~~  284 (327)
T 3lm5_A          256 TFSSVSQLATDFIQSLLVKNPEKRPTAEI  284 (327)
T ss_dssp             TTTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             hhcccCHHHHHHHHHHcCCChhhCcCHHH
Confidence            33456678999999999999999999753


No 149
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=6.4e-39  Score=292.91  Aligned_cols=233  Identities=26%  Similarity=0.416  Sum_probs=177.1

Q ss_pred             cccccccCCcceeeccCC----eeEEEEcccC--CcChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          111 SLISFNLTNSKFFFLHSN----EIAVKMLEHL--KGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~----~vAvK~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      .++.+++|.++.+....+    .||+|.+...  ....+.+.+|+++++++ +|+||+++++++.+.+..++||||++++
T Consensus        32 ~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~  111 (327)
T 1fvr_A           32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG  111 (327)
T ss_dssp             EEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred             eeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCC
Confidence            345556665555544333    2599988642  33456799999999999 8999999999999999999999999999


Q ss_pred             CHHHHhhhcCC----------CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEecccc
Q 039471          184 SLQKFIFSKTN----------SSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL  253 (363)
Q Consensus       184 sL~~~l~~~~~----------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~  253 (363)
                      +|.+++.....          ......+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus       112 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kL~Dfg~  188 (327)
T 1fvr_A          112 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL  188 (327)
T ss_dssp             BHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred             CHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCeEEEcccCc
Confidence            99999964420          0122579999999999999999999999   9999999999999999999999999999


Q ss_pred             ceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhc
Q 039471          254 AKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLG  324 (363)
Q Consensus       254 a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (363)
                      ++.......   .....++..|+|||++        +|+||||+++|||++ |+.||.......        +...+..+
T Consensus       189 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--------~~~~~~~~  257 (327)
T 1fvr_A          189 SRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--------LYEKLPQG  257 (327)
T ss_dssp             EESSCEECC---C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHGGGT
T ss_pred             Ccccccccc---ccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH--------HHHHhhcC
Confidence            875432211   1334568899999987        899999999999998 999987643321        22233222


Q ss_pred             cccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          325 QELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..      ...+...++.+.+++.+||+.||++|||++|
T Consensus       258 ~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e  290 (327)
T 1fvr_A          258 YR------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQ  290 (327)
T ss_dssp             CC------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CC------CCCCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence            11      1223345678999999999999999999753


No 150
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=3e-39  Score=307.45  Aligned_cols=224  Identities=20%  Similarity=0.236  Sum_probs=166.5

Q ss_pred             cccccccCCcceeec--cCCeeEEEEccc----CCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          111 SLISFNLTNSKFFFL--HSNEIAVKMLEH----LKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~--~~~~vAvK~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      .++.+++|.++.+..  .+..||||++..    .......+.+|+.++++++|+||+++++++.+.+..++||||+++++
T Consensus       155 ~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~  234 (446)
T 4ejn_A          155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE  234 (446)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCB
T ss_pred             EEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCc
Confidence            344444544443332  244599999964    23334677899999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++...      ..+++..+..++.||+.||+|||+  ..+|+||||||+|||++.++.+||+|||+++........ 
T Consensus       235 L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-  305 (446)
T 4ejn_A          235 LFFHLSRE------RVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT-  305 (446)
T ss_dssp             HHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----
T ss_pred             HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcc-
Confidence            99999543      568999999999999999999995  268999999999999999999999999999864433221 


Q ss_pred             ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          265 SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                       .....||+.|+|||++        +|+||||+++|||++|+.||.......        +...+....       ...+
T Consensus       306 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--------~~~~i~~~~-------~~~p  369 (446)
T 4ejn_A          306 -MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--------LFELILMEE-------IRFP  369 (446)
T ss_dssp             --CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCC-------CCCC
T ss_pred             -cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH--------HHHHHHhCC-------CCCC
Confidence             2446799999999998        799999999999999999997654321        222222111       1123


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERP  359 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RP  359 (363)
                      ..+++.+.+++.+||+.||++||
T Consensus       370 ~~~~~~~~~li~~~L~~dP~~R~  392 (446)
T 4ejn_A          370 RTLGPEAKSLLSGLLKKDPKQRL  392 (446)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTST
T ss_pred             ccCCHHHHHHHHHHcccCHHHhC
Confidence            34567899999999999999999


No 151
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=7.8e-39  Score=291.59  Aligned_cols=235  Identities=23%  Similarity=0.337  Sum_probs=180.7

Q ss_pred             ccccccCCcceeecc-------CCeeEEEEcccCCc--ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCC
Q 039471          112 LISFNLTNSKFFFLH-------SNEIAVKMLEHLKG--NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~-------~~~vAvK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      ++.+++|.++.....       +..||||++.....  ...++.+|+.++++++|+||+++++++.+++..++||||+++
T Consensus        33 lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (322)
T 1p4o_A           33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR  112 (322)
T ss_dssp             EEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             eccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCC
Confidence            445555555443322       33499999974432  234688999999999999999999999999999999999999


Q ss_pred             CCHHHHhhhcCC----CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceecc
Q 039471          183 GSLQKFIFSKTN----SSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS  258 (363)
Q Consensus       183 ~sL~~~l~~~~~----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~  258 (363)
                      ++|.+++.....    ......+++..+..++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||+++...
T Consensus       113 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~  189 (322)
T 1p4o_A          113 GDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY  189 (322)
T ss_dssp             CBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEECCTTCCCGGG
T ss_pred             CcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeEEECcCccccccc
Confidence            999999965321    1112457999999999999999999999   999999999999999999999999999998765


Q ss_pred             CCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhcccccc
Q 039471          259 KDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCL  329 (363)
Q Consensus       259 ~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (363)
                      ............+|..|+|||++        +|+||||+++|||++ |+.||.......        ....+..+..   
T Consensus       190 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--------~~~~~~~~~~---  258 (322)
T 1p4o_A          190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ--------VLRFVMEGGL---  258 (322)
T ss_dssp             GGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH--------HHHHHHTTCC---
T ss_pred             cccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH--------HHHHHHcCCc---
Confidence            54333233445578899999987        899999999999999 888886543221        2222222211   


Q ss_pred             ccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          330 DFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       330 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                         ...+...+..+.+++.+||+.||++|||++|
T Consensus       259 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e  289 (322)
T 1p4o_A          259 ---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLE  289 (322)
T ss_dssp             ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ---CCCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence               1123345677999999999999999999854


No 152
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=1.3e-38  Score=297.68  Aligned_cols=231  Identities=20%  Similarity=0.261  Sum_probs=172.4

Q ss_pred             ccccccccCCcceeecc-CCeeEEEEcccCCcC---hhHHHHHHHHHhccC--CCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLH-SNEIAVKMLEHLKGN---GQEFINEVATIGRIH--HFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~-~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ..++.+++|.++.+... +..||||++......   .+.+.+|+.++++++  |+||+++++++..+...++||| +.++
T Consensus        62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~  140 (390)
T 2zmd_A           62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI  140 (390)
T ss_dssp             EEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSE
T ss_pred             EEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCC
Confidence            34556666665554433 344999998654322   357899999999996  5999999999999999999999 5678


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++...      ..+++..+..++.||+.||.|||+   .+|+||||||+|||++ ++.+||+|||+++........
T Consensus       141 ~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~  210 (390)
T 2zmd_A          141 DLNSWLKKK------KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS  210 (390)
T ss_dssp             EHHHHHHHC------SSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred             CHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence            999999543      468999999999999999999999   9999999999999996 578999999999877654432


Q ss_pred             cccccccccccccCCccc-------------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhc
Q 039471          264 VSRTAARGTSGYIAPELF-------------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLG  324 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~-------------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (363)
                      .......||+.|+|||++                   +|||||||++|||++|+.||........      .+...+. .
T Consensus       211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~------~~~~~~~-~  283 (390)
T 2zmd_A          211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS------KLHAIID-P  283 (390)
T ss_dssp             ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH------HHHHHHC-T
T ss_pred             ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH------HHHHHhC-c
Confidence            223455799999999975                   6999999999999999999975432111      1111111 1


Q ss_pred             cccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          325 QELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      . .    ....+...+..+.+++.+||+.||++|||++|
T Consensus       284 ~-~----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e  317 (390)
T 2zmd_A          284 N-H----EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE  317 (390)
T ss_dssp             T-S----CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             c-c----cCCCCccchHHHHHHHHHHcccChhhCCCHHH
Confidence            1 0    11111222567899999999999999999864


No 153
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=7.2e-39  Score=289.56  Aligned_cols=230  Identities=23%  Similarity=0.341  Sum_probs=179.4

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCc-ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKG-NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~  186 (363)
                      ..++.+++|.++.+...  ++.||+|++..... ..+.+.+|+.++++++|+||+++++++.+....++||||+++++|.
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   94 (304)
T 2jam_A           15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELF   94 (304)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             eeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHH
Confidence            34555666655554433  45599999975432 3467889999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEE---cCCCCeeEeccccceeccCCccc
Q 039471          187 KFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL---DHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       187 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill---~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +++...      ..+++..+..++.|++.||+|||+   .+++|+||||+||++   +.++.+||+|||++........ 
T Consensus        95 ~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~-  164 (304)
T 2jam_A           95 DRILER------GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM-  164 (304)
T ss_dssp             HHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT-
T ss_pred             HHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc-
Confidence            998543      468999999999999999999999   999999999999999   7888999999999876543321 


Q ss_pred             cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          264 VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                         ....||..|+|||++        +|+||||+++|||++|+.||.......        ....+..+..   ......
T Consensus       165 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------~~~~i~~~~~---~~~~~~  230 (304)
T 2jam_A          165 ---STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK--------LFEKIKEGYY---EFESPF  230 (304)
T ss_dssp             ---HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HHHHHHHCCC---CCCTTT
T ss_pred             ---ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHcCCC---CCCccc
Confidence               334589999999987        899999999999999999997643321        2222222211   111122


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ....+..+.+++.+||+.||++|||++|
T Consensus       231 ~~~~~~~~~~li~~~l~~dp~~Rps~~~  258 (304)
T 2jam_A          231 WDDISESAKDFICHLLEKDPNERYTCEK  258 (304)
T ss_dssp             TTTSCHHHHHHHHHHHCSSTTTSCCHHH
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            3345678999999999999999999753


No 154
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=5.5e-40  Score=296.35  Aligned_cols=239  Identities=21%  Similarity=0.253  Sum_probs=166.6

Q ss_pred             cccccccccCCcceeeccCCeeEEEEcccCCcChhHHHHHHHHHhc--cCCCceeeeeeeeeeCC----ceeEEEeccCC
Q 039471          109 FQSLISFNLTNSKFFFLHSNEIAVKMLEHLKGNGQEFINEVATIGR--IHHFHIVRLLGFCSEGN----RRTLIYEFMPN  182 (363)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~~~lv~e~~~~  182 (363)
                      ...++.+++|.++.....++.||||++...  ....+.+|.+++..  ++|+||+++++++....    ..++||||+++
T Consensus         8 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~   85 (303)
T 3gxj_A            8 QESIGKGRFGEVWRGKWRGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH   85 (303)
T ss_dssp             CEEEEECSSSEEEEC-CTTSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred             hhhccCCCCeEEEEEEEcCcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccCC
Confidence            355677777777776667777999998633  45677888888887  78999999999998776    78999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCCCceecCCCCCceEEcCCCCeeEeccccc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLH--------QGCNQRILHFDIKPHNILLDHNFQPKISDFGLA  254 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a  254 (363)
                      |+|.+++..       ..+++..+..++.|++.||+|||        +   .+|+||||||+|||++.++.+||+|||++
T Consensus        86 g~L~~~l~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a  155 (303)
T 3gxj_A           86 GSLFDYLNR-------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             CCHHHHHHH-------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB---C-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred             CCHHHHHhc-------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccC---CCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence            999999943       35788889999999999999999        8   99999999999999999999999999999


Q ss_pred             eeccCCcccc--ccccccccccccCCccc--------------cCceehhHHHHHHhcC----------CCCCCcchhcc
Q 039471          255 KLCSKDISIV--SRTAARGTSGYIAPELF--------------SRNFCYGMMLLEMVGC----------RKNNDPAVEIQ  308 (363)
Q Consensus       255 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~--------------~Di~slG~il~el~~g----------~~~~~~~~~~~  308 (363)
                      +.........  ......||..|+|||++              +||||||+++|||++|          ..||.......
T Consensus       156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~  235 (303)
T 3gxj_A          156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  235 (303)
T ss_dssp             CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred             eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence            8765543321  11334689999999976              6999999999999999          45554322111


Q ss_pred             cccchHHHHHHHhhhccccccccCC-CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          309 SQIYFPEWIYNRMRLGQELCLDFEE-DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...  .. +...+.. ......... ......++.+.+++.+||+.||++|||++|
T Consensus       236 ~~~--~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~  287 (303)
T 3gxj_A          236 PSV--EE-MRKVVCE-QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR  287 (303)
T ss_dssp             CCC--C--CHHHHTT-SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHH
T ss_pred             ccH--HH-HHHHHHH-hhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHH
Confidence            110  00 1111111 111111111 122367788999999999999999999864


No 155
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=4.7e-39  Score=287.02  Aligned_cols=227  Identities=25%  Similarity=0.379  Sum_probs=173.8

Q ss_pred             ccccccccCCcceeeccCCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeC-CceeEEEeccCCCCHHHH
Q 039471          110 QSLISFNLTNSKFFFLHSNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEG-NRRTLIYEFMPNGSLQKF  188 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~~~~sL~~~  188 (363)
                      ..++.+++|.++.+...++.||||++.... ..+.+.+|+.++++++|+||+++++++.+. +..++||||+++++|.++
T Consensus        27 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~  105 (278)
T 1byg_A           27 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDY  105 (278)
T ss_dssp             EEEEECSSCEEEEEEETTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHH
T ss_pred             eEEecCCCceEEEEEEcCCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHH
Confidence            445666777776666667779999997543 567899999999999999999999987544 578999999999999999


Q ss_pred             hhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccccc
Q 039471          189 IFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTA  268 (363)
Q Consensus       189 l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  268 (363)
                      +.....    ..+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++.......     ..
T Consensus       106 l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-----~~  173 (278)
T 1byg_A          106 LRSRGR----SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DT  173 (278)
T ss_dssp             HHHHHH----HHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC---------------
T ss_pred             HHhccc----ccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccc-----cC
Confidence            954321    348899999999999999999999   999999999999999999999999999988654432     23


Q ss_pred             ccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHH
Q 039471          269 ARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGI  339 (363)
Q Consensus       269 ~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (363)
                      ..++..|+|||++        +|+||||+++|||++ |+.||.......        +...+..+.      ....+...
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--------~~~~~~~~~------~~~~~~~~  239 (278)
T 1byg_A          174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------VVPRVEKGY------KMDAPDGC  239 (278)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--------HHHHHTTTC------CCCCCTTC
T ss_pred             CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHhcCC------CCCCcccC
Confidence            3478899999987        899999999999998 999987543221        122222221      12233455


Q ss_pred             HHHHHHHHHHhccCCCCCCCCCCC
Q 039471          340 ARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       340 ~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ++.+.+++.+||+.||++|||++|
T Consensus       240 ~~~l~~li~~~l~~~p~~Rps~~~  263 (278)
T 1byg_A          240 PPAVYEVMKNCWHLDAAMRPSFLQ  263 (278)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHH
Confidence            678999999999999999999753


No 156
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=5.2e-39  Score=294.04  Aligned_cols=243  Identities=20%  Similarity=0.267  Sum_probs=176.4

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ..++.+++|.++.+...  ++.||||++......   .+.+.+|+.++++++|+||+++++++.+++..++||||+++++
T Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  110 (331)
T 4aaa_A           31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTI  110 (331)
T ss_dssp             EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred             eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcch
Confidence            44566666666665544  445999998654433   2457899999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++..      ...+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||++......... 
T Consensus       111 l~~~~~~------~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-  180 (331)
T 4aaa_A          111 LDDLELF------PNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV-  180 (331)
T ss_dssp             HHHHHHS------TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred             HHHHHhh------ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccc-
Confidence            9887632      2569999999999999999999999   99999999999999999999999999999876543321 


Q ss_pred             ccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHH-------HHHHHhhhc----
Q 039471          265 SRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPE-------WIYNRMRLG----  324 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~----  324 (363)
                       .....||..|+|||++         +|+||||+++|||++|+.||..............       .........    
T Consensus       181 -~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (331)
T 4aaa_A          181 -YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA  259 (331)
T ss_dssp             ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred             -cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence             2345689999999976         7999999999999999999976544322110000       000000000    


Q ss_pred             cccccccCCC-----CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          325 QELCLDFEED-----GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       325 ~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..........     ....+++.+.+++.+||+.||++|||++|
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  303 (331)
T 4aaa_A          260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAE  303 (331)
T ss_dssp             TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGG
T ss_pred             cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHH
Confidence            0000000000     11234678999999999999999999875


No 157
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.1e-38  Score=298.35  Aligned_cols=186  Identities=23%  Similarity=0.275  Sum_probs=143.5

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC---cChhHHHHHHHHHhccC-CCceeeeeeeeeeCC--ceeEEEeccC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK---GNGQEFINEVATIGRIH-HFHIVRLLGFCSEGN--RRTLIYEFMP  181 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~--~~~lv~e~~~  181 (363)
                      ..++.+++|.+..+...  ++.||||++....   ...+++.+|+.+++++. |+||+++++++...+  ..++||||++
T Consensus        15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~   94 (388)
T 3oz6_A           15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME   94 (388)
T ss_dssp             EC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS
T ss_pred             EEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC
Confidence            34555566655554332  4459999986432   23357789999999997 999999999997543  7899999997


Q ss_pred             CCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCc
Q 039471          182 NGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       182 ~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~  261 (363)
                       ++|.+++..       ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+|+......
T Consensus        95 -~~L~~~~~~-------~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  163 (388)
T 3oz6_A           95 -TDLHAVIRA-------NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR  163 (388)
T ss_dssp             -EEHHHHHHH-------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred             -cCHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence             599999843       358999999999999999999999   999999999999999999999999999998764311


Q ss_pred             c-------------------ccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchh
Q 039471          262 S-------------------IVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVE  306 (363)
Q Consensus       262 ~-------------------~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~  306 (363)
                      .                   ........||+.|+|||++         +|||||||++|||++|++||.....
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  236 (388)
T 3oz6_A          164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST  236 (388)
T ss_dssp             CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            0                   0112345699999999987         7999999999999999999976543


No 158
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.7e-39  Score=297.72  Aligned_cols=231  Identities=23%  Similarity=0.329  Sum_probs=167.1

Q ss_pred             cccccccCCcceeeccCC-----eeEEEEcccCCc--ChhHHHHHHHHHhccCCCceeeeeeeee-eCCceeEEEeccCC
Q 039471          111 SLISFNLTNSKFFFLHSN-----EIAVKMLEHLKG--NGQEFINEVATIGRIHHFHIVRLLGFCS-EGNRRTLIYEFMPN  182 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~-----~vAvK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~  182 (363)
                      .++.+++|.++......+     .||||.++....  ..++|.+|+.++++++|+||+++++++. .++..++||||+++
T Consensus        96 ~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~  175 (373)
T 3c1x_A           96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH  175 (373)
T ss_dssp             EEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTT
T ss_pred             EeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCC
Confidence            456666666665544221     389999874332  3468999999999999999999999875 45688999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      ++|.+++...     ...+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus       176 g~L~~~l~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  247 (373)
T 3c1x_A          176 GDLRNFIRNE-----THNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  247 (373)
T ss_dssp             CBHHHHHHCT-----TCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             CCHHHHHhhc-----ccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccccccccc
Confidence            9999999533     2568899999999999999999999   9999999999999999999999999999987644321


Q ss_pred             c--cccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhcccccccc
Q 039471          263 I--VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDF  331 (363)
Q Consensus       263 ~--~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (363)
                      .  .......+|..|+|||++        +|+||||+++|||++ |.+||.......        +...+..+...    
T Consensus       248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--------~~~~~~~~~~~----  315 (373)
T 3c1x_A          248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--------ITVYLLQGRRL----  315 (373)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--------HHHHHHTTCCC----
T ss_pred             ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--------HHHHHHcCCCC----
Confidence            1  112334577889999987        899999999999999 566665433221        11122222211    


Q ss_pred             CCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          332 EEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       332 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                        ..+..++..+.+++.+||+.||++|||++|
T Consensus       316 --~~p~~~~~~l~~li~~cl~~dp~~RPs~~e  345 (373)
T 3c1x_A          316 --LQPEYCPDPLYEVMLKCWHPKAEMRPSFSE  345 (373)
T ss_dssp             --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             --CCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence              123345677999999999999999999864


No 159
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=2e-38  Score=294.01  Aligned_cols=238  Identities=16%  Similarity=0.147  Sum_probs=172.4

Q ss_pred             cccccccCCcceeecc-------CCeeEEEEcccCCc------------ChhHHHHHHHHHhccCCCceeeeeeeeeeC-
Q 039471          111 SLISFNLTNSKFFFLH-------SNEIAVKMLEHLKG------------NGQEFINEVATIGRIHHFHIVRLLGFCSEG-  170 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~-------~~~vAvK~~~~~~~------------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-  170 (363)
                      .++.+++|.++.+...       +..||||++.....            ....+.+|+..++.++|+||+++++++... 
T Consensus        42 ~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~  121 (364)
T 3op5_A           42 PIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDK  121 (364)
T ss_dssp             ECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEE
T ss_pred             EEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeecc
Confidence            3456666666555443       24599999864331            112345566677788899999999998764 


Q ss_pred             ---CceeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEc--CCCC
Q 039471          171 ---NRRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD--HNFQ  245 (363)
Q Consensus       171 ---~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~--~~~~  245 (363)
                         ...++||||+ +++|.+++....     ..+++..++.++.||+.||+|||+   .+|+||||||+|||++  .++.
T Consensus       122 ~~~~~~~lv~e~~-g~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~~~~~~  192 (364)
T 3op5_A          122 NGKSYRFMIMDRF-GSDLQKIYEANA-----KRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYKNPDQ  192 (364)
T ss_dssp             TTEEEEEEEEECE-EEEHHHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEESSCTTC
T ss_pred             CCcceEEEEEeCC-CCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEecCCCCe
Confidence               4589999999 999999996432     569999999999999999999999   9999999999999999  8899


Q ss_pred             eeEeccccceeccCCccccc-----cccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccc
Q 039471          246 PKISDFGLAKLCSKDISIVS-----RTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIY  312 (363)
Q Consensus       246 ~kl~Dfg~a~~~~~~~~~~~-----~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~  312 (363)
                      +||+|||+++..........     .....||..|+|||++        +||||||+++|||++|+.||.......... 
T Consensus       193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~-  271 (364)
T 3op5_A          193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV-  271 (364)
T ss_dssp             EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH-
T ss_pred             EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH-
Confidence            99999999988754432111     1334599999999988        799999999999999999998643322111 


Q ss_pred             hHHHHHHHhhhc--cccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          313 FPEWIYNRMRLG--QELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       313 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                        ..........  .......   .....+.++.+++.+||+.+|++|||+++
T Consensus       272 --~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~RP~~~~  319 (364)
T 3op5_A          272 --RDSKIRYRENIASLMDKCF---PAANAPGEIAKYMETVKLLDYTEKPLYEN  319 (364)
T ss_dssp             --HHHHHHHHHCHHHHHHHHS---CTTCCCHHHHHHHHHHHTCCTTCCCCHHH
T ss_pred             --HHHHHHhhhhHHHHHHHhc---ccccCHHHHHHHHHHHhcCCCCCCCCHHH
Confidence              1111111000  0000000   01223567999999999999999999753


No 160
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=7.6e-39  Score=290.16  Aligned_cols=230  Identities=17%  Similarity=0.170  Sum_probs=172.7

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccCCcC----hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHLKGN----GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      .++.+++|.++.+...  ++.||||++......    .+.+.+|+.++++++|+||+++++++..++..++||||+++++
T Consensus        41 ~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~  120 (309)
T 2h34_A           41 LVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVD  120 (309)
T ss_dssp             EEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEE
T ss_pred             EEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCC
Confidence            3455566655555432  444999999754322    3678899999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++...      ..+++..+..++.|++.||+|||+   .+|+|+||||+||+++.++.+||+|||++......... 
T Consensus       121 L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-  190 (309)
T 2h34_A          121 LAAMLRRQ------GPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT-  190 (309)
T ss_dssp             HHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC-----------
T ss_pred             HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCccccccccc-
Confidence            99999543      458999999999999999999999   99999999999999999999999999999876543221 


Q ss_pred             ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          265 SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                      ......|+..|+|||++        +|+||||+++|||++|+.||.......        ....+.....    ......
T Consensus       191 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------~~~~~~~~~~----~~~~~~  258 (309)
T 2h34_A          191 QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV--------MGAHINQAIP----RPSTVR  258 (309)
T ss_dssp             ------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH--------HHHHHHSCCC----CGGGTS
T ss_pred             cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH--------HHHHhccCCC----CccccC
Confidence            12345689999999988        899999999999999999997654321        1111211111    111223


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCC-CCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERP-SMP  362 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RP-s~~  362 (363)
                      ..++..+.+++.+||+.||++|| |++
T Consensus       259 ~~~~~~l~~li~~~l~~dP~~Rp~s~~  285 (309)
T 2h34_A          259 PGIPVAFDAVIARGMAKNPEDRYVTCG  285 (309)
T ss_dssp             TTCCTHHHHHHHHHTCSSGGGSCSSHH
T ss_pred             CCCCHHHHHHHHHhccCCHHHHHHhHH
Confidence            34567799999999999999999 654


No 161
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=2.8e-38  Score=314.11  Aligned_cols=224  Identities=19%  Similarity=0.221  Sum_probs=180.1

Q ss_pred             ccccccCCcceeeccC--CeeEEEEccc----CCcChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          112 LISFNLTNSKFFFLHS--NEIAVKMLEH----LKGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~~--~~vAvK~~~~----~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ++.+++|.++.+....  +.||||+++.    .....+.+.+|..++..+ +|+||+++++++.+....++||||+++|+
T Consensus       349 LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~  428 (674)
T 3pfq_A          349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGD  428 (674)
T ss_dssp             SSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCB
T ss_pred             EccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCc
Confidence            4444454444444333  3399999864    234556788999999988 69999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++...      ..+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......  
T Consensus       429 L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~--  497 (674)
T 3pfq_A          429 LMYHIQQV------GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--  497 (674)
T ss_dssp             HHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC--
T ss_pred             HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeeccccCCc--
Confidence            99999543      469999999999999999999999   9999999999999999999999999999986443322  


Q ss_pred             ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          265 SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                      ......||+.|+|||++        +|+||||+++|||++|+.||.......        ++..+....       ...+
T Consensus       498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~--------~~~~i~~~~-------~~~p  562 (674)
T 3pfq_A          498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--------LFQSIMEHN-------VAYP  562 (674)
T ss_dssp             CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHSSC-------CCCC
T ss_pred             ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH--------HHHHHHhCC-------CCCC
Confidence            12456799999999998        799999999999999999998654322        233333221       1223


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSM  361 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~  361 (363)
                      ..+++++.+++.+||+.||++||++
T Consensus       563 ~~~s~~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          563 KSMSKEAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             TTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred             ccCCHHHHHHHHHHccCCHHHCCCC
Confidence            4567789999999999999999997


No 162
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=6.7e-39  Score=297.14  Aligned_cols=231  Identities=23%  Similarity=0.320  Sum_probs=180.6

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcC---------hhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEE
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGN---------GQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIY  177 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~---------~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~  177 (363)
                      ..++.+++|.++.+...  ++.||||++......         .+.+.+|+.+++++ +|+||+++++++......++||
T Consensus       100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~  179 (365)
T 2y7j_A          100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF  179 (365)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEE
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEE
Confidence            34556666666555543  456999998644321         34678999999999 7999999999999999999999


Q ss_pred             eccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceec
Q 039471          178 EFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLC  257 (363)
Q Consensus       178 e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~  257 (363)
                      ||+++++|.+++...      ..+++..+..++.||+.||.|||+   .+++|+||||+|||++.++.+||+|||++...
T Consensus       180 e~~~g~~L~~~l~~~------~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~  250 (365)
T 2y7j_A          180 DLMRKGELFDYLTEK------VALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHL  250 (365)
T ss_dssp             CCCTTCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EeCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence            999999999999532      468999999999999999999999   99999999999999999999999999999887


Q ss_pred             cCCccccccccccccccccCCccc--------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhh
Q 039471          258 SKDISIVSRTAARGTSGYIAPELF--------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRL  323 (363)
Q Consensus       258 ~~~~~~~~~~~~~gt~~y~aPE~~--------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (363)
                      ......   ....||+.|+|||++              +|+||||+++|||++|+.||.......        ....+..
T Consensus       251 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--------~~~~i~~  319 (365)
T 2y7j_A          251 EPGEKL---RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL--------MLRMIME  319 (365)
T ss_dssp             CTTCCB---CCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHH
T ss_pred             CCCccc---ccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHh
Confidence            654332   345689999999975              799999999999999999997643221        1122221


Q ss_pred             ccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          324 GQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +....   ........+..+.+++.+||+.||++|||++|
T Consensus       320 ~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e  356 (365)
T 2y7j_A          320 GQYQF---SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQ  356 (365)
T ss_dssp             TCCCC---CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             CCCCC---CCcccccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            11100   00001123567999999999999999999754


No 163
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=4.9e-39  Score=287.50  Aligned_cols=231  Identities=22%  Similarity=0.309  Sum_probs=177.1

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC-------cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEecc
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK-------GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      ..++.+++|.++.+...  ++.||+|++....       ...+.+.+|+.++++++|+||+++++++.++...++||||+
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   90 (283)
T 3bhy_A           11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELV   90 (283)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             HhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeec
Confidence            34455566655555443  4559999986432       13568999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCC----CeeEecccccee
Q 039471          181 PNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF----QPKISDFGLAKL  256 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~----~~kl~Dfg~a~~  256 (363)
                      ++++|.+++...      ..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++    .+||+|||.+..
T Consensus        91 ~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~  161 (283)
T 3bhy_A           91 SGGELFDFLAEK------ESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK  161 (283)
T ss_dssp             CSCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             CCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence            999999999542      468999999999999999999999   9999999999999998877    799999999987


Q ss_pred             ccCCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccc
Q 039471          257 CSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELC  328 (363)
Q Consensus       257 ~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (363)
                      .......   ....|+..|+|||++        +|+||||+++|||++|+.||.......        ....+.....  
T Consensus       162 ~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~--  228 (283)
T 3bhy_A          162 IEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE--------TLTNISAVNY--  228 (283)
T ss_dssp             CC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHTTCC--
T ss_pred             ccCCCcc---cccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH--------HHHHhHhccc--
Confidence            6544322   344589999999987        899999999999999999997654321        1111111110  


Q ss_pred             cccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          329 LDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       329 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       ..........+..+.+++.+||+.||++|||++|
T Consensus       229 -~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  262 (283)
T 3bhy_A          229 -DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQ  262 (283)
T ss_dssp             -CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             -CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHH
Confidence             0001111234567999999999999999999753


No 164
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=3.4e-39  Score=289.38  Aligned_cols=224  Identities=21%  Similarity=0.302  Sum_probs=172.2

Q ss_pred             cccccccCCcceeeccC---------CeeEEEEcccCC-cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEecc
Q 039471          111 SLISFNLTNSKFFFLHS---------NEIAVKMLEHLK-GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~~---------~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      .++.+++|.++.+....         ..||+|++.... ...+.+.+|+.++++++|+||+++++++.+++..++||||+
T Consensus        15 ~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   94 (289)
T 4fvq_A           15 SLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFV   94 (289)
T ss_dssp             EEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             eeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECC
Confidence            34555555555443332         349999986443 34578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCC--------eeEeccc
Q 039471          181 PNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ--------PKISDFG  252 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~--------~kl~Dfg  252 (363)
                      ++++|.+++....     ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.        +||+|||
T Consensus        95 ~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg  166 (289)
T 4fvq_A           95 KFGSLDTYLKKNK-----NCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG  166 (289)
T ss_dssp             TTCBHHHHHHHTG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred             CCCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceeeeccCc
Confidence            9999999996432     448999999999999999999999   99999999999999998887        9999999


Q ss_pred             cceeccCCccccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhh
Q 039471          253 LAKLCSKDISIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRL  323 (363)
Q Consensus       253 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (363)
                      ++......      ....+|..|+|||++         +|+||||+++|||++|..|+........       .......
T Consensus       167 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-------~~~~~~~  233 (289)
T 4fvq_A          167 ISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-------KLQFYED  233 (289)
T ss_dssp             SCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-------HHHHHHT
T ss_pred             ccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH-------HHHHhhc
Confidence            98755332      223478899999987         7999999999999996655543322211       1111111


Q ss_pred             ccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          324 GQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...        .+...+..+.+++.+||+.||++|||++|
T Consensus       234 ~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~  265 (289)
T 4fvq_A          234 RHQ--------LPAPKAAELANLINNCMDYEPDHRPSFRA  265 (289)
T ss_dssp             TCC--------CCCCSSCTTHHHHHHHSCSSGGGSCCHHH
T ss_pred             cCC--------CCCCCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            111        11122456889999999999999999854


No 165
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=1.5e-38  Score=291.50  Aligned_cols=226  Identities=22%  Similarity=0.299  Sum_probs=180.3

Q ss_pred             ccccccCCcceeecc--CCeeEEEEcccCC----cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          112 LISFNLTNSKFFFLH--SNEIAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~--~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ++.+++|.++.+...  ++.||+|++....    ...+.+.+|+.++++++|+||+++++++.+++..++||||+++++|
T Consensus        49 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  128 (335)
T 2owb_A           49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL  128 (335)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBH
T ss_pred             EeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCH
Confidence            455666665555443  3349999986432    2346788999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      .+++...      ..+++..++.++.|++.||+|||+   .+|+|+||||+|||++.++.+||+|||++.........  
T Consensus       129 ~~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--  197 (335)
T 2owb_A          129 LELHKRR------KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--  197 (335)
T ss_dssp             HHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCC--
T ss_pred             HHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccCccc--
Confidence            9998532      468999999999999999999999   99999999999999999999999999999876543221  


Q ss_pred             cccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcH
Q 039471          266 RTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDE  337 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (363)
                      .....||..|+|||++        +|+||||+++|||++|+.||.......        ....+.....       ..+.
T Consensus       198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------~~~~~~~~~~-------~~~~  262 (335)
T 2owb_A          198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--------TYLRIKKNEY-------SIPK  262 (335)
T ss_dssp             BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHHTCC-------CCCT
T ss_pred             ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH--------HHHHHhcCCC-------CCCc
Confidence            2345689999999987        899999999999999999997643221        1111211111       1223


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          338 GIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       338 ~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .++..+.+++.+||+.||++|||++|
T Consensus       263 ~~~~~~~~li~~~l~~dp~~Rps~~e  288 (335)
T 2owb_A          263 HINPVAASLIQKMLQTDPTARPTINE  288 (335)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCGGG
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHH
Confidence            44567899999999999999999875


No 166
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=2.5e-38  Score=284.55  Aligned_cols=233  Identities=23%  Similarity=0.255  Sum_probs=179.6

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccCC-cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHH
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHLK-GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQK  187 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~  187 (363)
                      .++.+++|.++.+...  +..||||++.... ...+.+.+|+.++++++|+||+++++++.+.+..++||||+++++|.+
T Consensus        29 ~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  108 (295)
T 2clq_A           29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSA  108 (295)
T ss_dssp             EEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHH
T ss_pred             EEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHH
Confidence            4566666666655533  3449999987543 345789999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcC-CCCeeEeccccceeccCCcccccc
Q 039471          188 FIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDH-NFQPKISDFGLAKLCSKDISIVSR  266 (363)
Q Consensus       188 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~  266 (363)
                      ++.....   ...+++..+..++.|++.||+|||+   .+++|+||||+||+++. ++.+||+|||++.........  .
T Consensus       109 ~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~--~  180 (295)
T 2clq_A          109 LLRSKWG---PLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC--T  180 (295)
T ss_dssp             HHHHTTC---CCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-------
T ss_pred             HHHhhcc---CCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCc--c
Confidence            9965432   2457899999999999999999999   99999999999999987 899999999999876543221  2


Q ss_pred             ccccccccccCCccc----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          267 TAARGTSGYIAPELF----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       267 ~~~~gt~~y~aPE~~----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                      ....|+..|+|||++          +|+||||+++|||++|+.||.........      ......      .......+
T Consensus       181 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------~~~~~~------~~~~~~~~  248 (295)
T 2clq_A          181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA------MFKVGM------FKVHPEIP  248 (295)
T ss_dssp             CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH------HHHHHH------HCCCCCCC
T ss_pred             cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH------HHhhcc------cccccccc
Confidence            345689999999986          79999999999999999998654322110      111000      01112233


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...+..+.+++.+||+.||++|||++|
T Consensus       249 ~~~~~~~~~li~~~l~~dp~~Rps~~~  275 (295)
T 2clq_A          249 ESMSAEAKAFILKCFEPDPDKRACAND  275 (295)
T ss_dssp             TTSCHHHHHHHHHTTCSSTTTSCCHHH
T ss_pred             ccCCHHHHHHHHHHccCChhhCCCHHH
Confidence            455678999999999999999999753


No 167
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=7.1e-39  Score=286.74  Aligned_cols=225  Identities=20%  Similarity=0.280  Sum_probs=179.2

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccC----CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHL----KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      .++.+++|.++.+...  +..||||++...    ....+.+.+|++++++++|+||+++++++.+++..++||||+++++
T Consensus        21 ~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  100 (284)
T 2vgo_A           21 PLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE  100 (284)
T ss_dssp             EEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEE
T ss_pred             eecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCc
Confidence            3455555555554433  234999998532    2345678999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++...      ..+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++........  
T Consensus       101 L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--  169 (284)
T 2vgo_A          101 LYKELQKH------GRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR--  169 (284)
T ss_dssp             HHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB--
T ss_pred             HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCccccc--
Confidence            99999543      458999999999999999999999   9999999999999999999999999999876654322  


Q ss_pred             ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          265 SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                        ....|+..|+|||++        +|+||||+++|||++|+.||.......        ....+....       ...+
T Consensus       170 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------~~~~~~~~~-------~~~~  232 (284)
T 2vgo_A          170 --RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE--------THRRIVNVD-------LKFP  232 (284)
T ss_dssp             --CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHTTC-------CCCC
T ss_pred             --ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH--------HHHHHhccc-------cCCC
Confidence              345689999999987        899999999999999999997643321        111221111       1122


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...+..+.+++.+||+.||++|||++|
T Consensus       233 ~~~~~~~~~li~~~l~~~p~~Rps~~~  259 (284)
T 2vgo_A          233 PFLSDGSKDLISKLLRYHPPQRLPLKG  259 (284)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CcCCHHHHHHHHHHhhcCHhhCCCHHH
Confidence            345677999999999999999999753


No 168
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=9.6e-39  Score=285.45  Aligned_cols=229  Identities=20%  Similarity=0.301  Sum_probs=174.4

Q ss_pred             cccccccCCcceeeccCC-----eeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          111 SLISFNLTNSKFFFLHSN-----EIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~-----~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      .++.+++|.++.+.....     .||+|++....  ...+.+.+|+.++++++|+||+++++++.++ ..++||||++++
T Consensus        19 ~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~~~~~   97 (281)
T 3cc6_A           19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIMELYPYG   97 (281)
T ss_dssp             EEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEEECCTTC
T ss_pred             EEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEEecCCCC
Confidence            345556665555443222     29999987542  2346789999999999999999999998754 568999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++....     ..+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++.........
T Consensus        98 ~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  169 (281)
T 3cc6_A           98 ELGHYLERNK-----NSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY  169 (281)
T ss_dssp             BHHHHHHHHT-----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC------
T ss_pred             CHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCccccccccc
Confidence            9999996432     458999999999999999999999   99999999999999999999999999999876543321


Q ss_pred             cccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCCC
Q 039471          264 VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEED  334 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                       ......++..|+|||++        +|+||||+++|||++ |+.||.......        ....+..+...      .
T Consensus       170 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--------~~~~~~~~~~~------~  234 (281)
T 3cc6_A          170 -KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--------VIGVLEKGDRL------P  234 (281)
T ss_dssp             ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--------HHHHHHHTCCC------C
T ss_pred             -ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--------HHHHHhcCCCC------C
Confidence             12344578899999987        799999999999998 999987543322        11222222111      1


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          335 GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       335 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .+...++.+.+++.+||+.||++|||++|
T Consensus       235 ~~~~~~~~l~~li~~~l~~~p~~Rps~~e  263 (281)
T 3cc6_A          235 KPDLCPPVLYTLMTRCWDYDPSDRPRFTE  263 (281)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCCCHHHHHHHHHHccCCchhCcCHHH
Confidence            22335677999999999999999999864


No 169
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=9.5e-39  Score=291.79  Aligned_cols=237  Identities=22%  Similarity=0.340  Sum_probs=178.2

Q ss_pred             ccccccccCCcceeecc-------CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEecc
Q 039471          110 QSLISFNLTNSKFFFLH-------SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~-------~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      ..++.+++|.++.+...       +..||||++....  ....++.+|+.++++++|+||+++++++.+....++||||+
T Consensus        36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  115 (327)
T 2yfx_A           36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELM  115 (327)
T ss_dssp             EECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecC
Confidence            34455666665554422       2349999996432  23357889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhhcCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcC---CCCeeEecccccee
Q 039471          181 PNGSLQKFIFSKTNS-SSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDH---NFQPKISDFGLAKL  256 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~---~~~~kl~Dfg~a~~  256 (363)
                      ++++|.+++...... .....+++..++.++.|++.||.|||+   .+|+||||||+|||++.   +..+||+|||++..
T Consensus       116 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~  192 (327)
T 2yfx_A          116 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD  192 (327)
T ss_dssp             TTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred             CCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEECccccccc
Confidence            999999999765431 122458999999999999999999999   99999999999999984   44699999999986


Q ss_pred             ccCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhcccc
Q 039471          257 CSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQEL  327 (363)
Q Consensus       257 ~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (363)
                      ..............+|..|+|||++        +|+||||+++|||++ |+.||.......        +...+..+...
T Consensus       193 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--------~~~~~~~~~~~  264 (327)
T 2yfx_A          193 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--------VLEFVTSGGRM  264 (327)
T ss_dssp             HHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--------HHHHHHTTCCC
T ss_pred             cccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH--------HHHHHhcCCCC
Confidence            6544332223445678899999987        899999999999998 888886543221        22222222111


Q ss_pred             ccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          328 CLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       328 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                            ..+..++..+.+++.+||+.||++|||++|
T Consensus       265 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  294 (327)
T 2yfx_A          265 ------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAI  294 (327)
T ss_dssp             ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ------CCCCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence                  123345677999999999999999999853


No 170
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=2.1e-38  Score=285.14  Aligned_cols=227  Identities=22%  Similarity=0.294  Sum_probs=180.6

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccCC----cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      .++.+++|.++.+...  ++.||+|++....    ...+.+.+|+.++++++|+||+++++++.+++..++||||+++++
T Consensus        22 ~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  101 (294)
T 2rku_A           22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS  101 (294)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred             EEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCC
Confidence            3455666665555444  3349999986432    233578899999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++...      ..+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++......... 
T Consensus       102 L~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~-  171 (294)
T 2rku_A          102 LLELHKRR------KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-  171 (294)
T ss_dssp             HHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCC-
T ss_pred             HHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCccc-
Confidence            99988432      468999999999999999999999   99999999999999999999999999999876543221 


Q ss_pred             ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          265 SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                       .....||..|+|||++        +|+||||+++|||++|+.||.......        ....+....       ...+
T Consensus       172 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~-------~~~~  235 (294)
T 2rku_A          172 -KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--------TYLRIKKNE-------YSIP  235 (294)
T ss_dssp             -BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHTTC-------CCCC
T ss_pred             -cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhhcc-------CCCc
Confidence             2345689999999987        899999999999999999997654321        111221111       1122


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...+..+.+++.+||+.||++|||++|
T Consensus       236 ~~~~~~~~~li~~~l~~~p~~Rps~~~  262 (294)
T 2rku_A          236 KHINPVAASLIQKMLQTDPTARPTINE  262 (294)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCGGG
T ss_pred             cccCHHHHHHHHHHcccChhhCcCHHH
Confidence            345567999999999999999999875


No 171
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=4.6e-39  Score=294.52  Aligned_cols=236  Identities=24%  Similarity=0.363  Sum_probs=180.3

Q ss_pred             ccccccCCcceeeccC-------CeeEEEEcccCCc--ChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccC
Q 039471          112 LISFNLTNSKFFFLHS-------NEIAVKMLEHLKG--NGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMP  181 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~~-------~~vAvK~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~  181 (363)
                      ++.+++|.++.+....       ..||+|++.....  ..+.+.+|+.+++++ +|+||+++++++.+++..++||||++
T Consensus        54 lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~  133 (333)
T 2i1m_A           54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC  133 (333)
T ss_dssp             EEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             eccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCC
Confidence            4555555554443221       2499999975432  335788999999999 89999999999999999999999999


Q ss_pred             CCCHHHHhhhcCCC--------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEecccc
Q 039471          182 NGSLQKFIFSKTNS--------SSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL  253 (363)
Q Consensus       182 ~~sL~~~l~~~~~~--------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~  253 (363)
                      +|+|.+++......        .....+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus       134 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  210 (333)
T 2i1m_A          134 YGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGL  210 (333)
T ss_dssp             TEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGGGEEEBCCCGG
T ss_pred             CCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCCCeEEECcccc
Confidence            99999999653210        012468999999999999999999999   9999999999999999999999999999


Q ss_pred             ceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhc
Q 039471          254 AKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLG  324 (363)
Q Consensus       254 a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (363)
                      +................+|..|+|||++        +|+||||+++|||++ |..||........       .......+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-------~~~~~~~~  283 (333)
T 2i1m_A          211 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-------FYKLVKDG  283 (333)
T ss_dssp             GCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-------HHHHHHHT
T ss_pred             ccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-------HHHHHhcC
Confidence            9876554433333445678899999987        899999999999998 8888875432221       11112111


Q ss_pred             cccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          325 QELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..      ...+...+..+.+++.+||+.||.+|||++|
T Consensus       284 ~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~  316 (333)
T 2i1m_A          284 YQ------MAQPAFAPKNIYSIMQACWALEPTHRPTFQQ  316 (333)
T ss_dssp             CC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CC------CCCCCCCCHHHHHHHHHHhccChhhCcCHHH
Confidence            11      1122334567999999999999999999864


No 172
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=1.6e-38  Score=290.42  Aligned_cols=236  Identities=16%  Similarity=0.251  Sum_probs=177.3

Q ss_pred             cccccccCCcceeec--cCCeeEEEEcccCCcChhHHHHHHHHHhccC-CCceeeeeeeeee--CCceeEEEeccCCCCH
Q 039471          111 SLISFNLTNSKFFFL--HSNEIAVKMLEHLKGNGQEFINEVATIGRIH-HFHIVRLLGFCSE--GNRRTLIYEFMPNGSL  185 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--~~~~~lv~e~~~~~sL  185 (363)
                      .++.+++|.++.+..  .++.||||++..  ...+.+.+|+.++++++ |+||+++++++.+  ....++||||+++++|
T Consensus        43 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l  120 (330)
T 3nsz_A           43 KLGRGKYSEVFEAINITNNEKVVVKILKP--VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF  120 (330)
T ss_dssp             EEEECSSEEEEEEEETTTCCEEEEEEECS--CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCH
T ss_pred             EecccCCeEEEEEEECCCCcEEEEEEecc--cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhH
Confidence            345555555555432  344599999873  34578999999999997 9999999999987  6678999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCC-CeeEeccccceeccCCcccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      .+++         ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++ .+||+|||+++........ 
T Consensus       121 ~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~-  187 (330)
T 3nsz_A          121 KQLY---------QTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-  187 (330)
T ss_dssp             HHHG---------GGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC-
T ss_pred             HHHH---------HhCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc-
Confidence            9998         458999999999999999999999   9999999999999999776 8999999999877654432 


Q ss_pred             ccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccch------HHHHHHHhhhcc----
Q 039471          265 SRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYF------PEWIYNRMRLGQ----  325 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~------~~~~~~~~~~~~----  325 (363)
                        ....++..|+|||++         +|+||||+++|||++|+.||............      .......+....    
T Consensus       188 --~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  265 (330)
T 3nsz_A          188 --NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD  265 (330)
T ss_dssp             --CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred             --ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccc
Confidence              345689999999986         79999999999999999999543322111100      000000000000    


Q ss_pred             -------------ccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          326 -------------ELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       326 -------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                                   .............+++.+.+++.+||++||++|||++|
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e  316 (330)
T 3nsz_A          266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE  316 (330)
T ss_dssp             THHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             cchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHH
Confidence                         00001111223336788999999999999999999864


No 173
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=4e-39  Score=293.95  Aligned_cols=239  Identities=20%  Similarity=0.252  Sum_probs=171.6

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCc--ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKG--NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ..++.+++|.++.+...  ++.||||++.....  ....+.+|+.++++++|+||+++++++.+++..++||||++ ++|
T Consensus         8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l   86 (324)
T 3mtl_A            8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDL   86 (324)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEH
T ss_pred             EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCH
Confidence            34555566555555443  44499999864332  22356689999999999999999999999999999999997 599


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      .+++....     ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++........  
T Consensus        87 ~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~--  156 (324)
T 3mtl_A           87 KQYLDDCG-----NIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT--  156 (324)
T ss_dssp             HHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred             HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCccc--
Confidence            99986432     568999999999999999999999   99999999999999999999999999999865533221  


Q ss_pred             cccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcccc---------
Q 039471          266 RTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQEL---------  327 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  327 (363)
                      .....||..|+|||++         +|+||||+++|||++|+.||.........    ..+...+......         
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~  232 (324)
T 3mtl_A          157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL----HFIFRILGTPTEETWPGILSNE  232 (324)
T ss_dssp             ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHHHHCCCCTTTSTTGGGCH
T ss_pred             cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHHHhCCCChHhchhhhcch
Confidence            2344689999999986         79999999999999999999765433211    1111111000000         


Q ss_pred             ------ccccCC----CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          328 ------CLDFEE----DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       328 ------~~~~~~----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                            ......    .....+++.+.+++.+||++||++|||++|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  278 (324)
T 3mtl_A          233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAED  278 (324)
T ss_dssp             HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHH
Confidence                  000000    011234567899999999999999999864


No 174
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.7e-38  Score=286.01  Aligned_cols=232  Identities=22%  Similarity=0.314  Sum_probs=176.5

Q ss_pred             cccccccCCcceeecc--CC---eeEEEEcccCCc--ChhHHHHHHHHHhccCCCceeeeeeeeeeCCce-eEEEeccCC
Q 039471          111 SLISFNLTNSKFFFLH--SN---EIAVKMLEHLKG--NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRR-TLIYEFMPN  182 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~---~vAvK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~lv~e~~~~  182 (363)
                      .++.+++|.++.+...  ..   .||+|++.....  ..+.+.+|+.++++++|+||+++++++.+.... +++|||+.+
T Consensus        28 ~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~  107 (298)
T 3pls_A           28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCH  107 (298)
T ss_dssp             EEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTT
T ss_pred             eeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccC
Confidence            3556666665554432  11   399999875332  336788999999999999999999999766554 999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      ++|.+++...     ...+++..+..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++.......
T Consensus       108 ~~L~~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  179 (298)
T 3pls_A          108 GDLLQFIRSP-----QRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY  179 (298)
T ss_dssp             CBHHHHHHCT-----TCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred             CCHHHHHhcc-----ccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence            9999999542     3568999999999999999999999   9999999999999999999999999999986644321


Q ss_pred             c--cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccC
Q 039471          263 I--VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFE  332 (363)
Q Consensus       263 ~--~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (363)
                      .  .......++..|+|||.+        +|+||||+++|||++|..|+........       ....+..+..      
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~-------~~~~~~~~~~------  246 (298)
T 3pls_A          180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD-------LTHFLAQGRR------  246 (298)
T ss_dssp             GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG-------HHHHHHTTCC------
T ss_pred             cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH-------HHHHhhcCCC------
Confidence            1  122345678899999987        7999999999999996666544332221       1222222211      


Q ss_pred             CCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          333 EDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       333 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...+...+..+.+++.+||+.||++|||++|
T Consensus       247 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~  277 (298)
T 3pls_A          247 LPQPEYCPDSLYQVMQQCWEADPAVRPTFRV  277 (298)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCccchHHHHHHHHHHccCChhhCcCHHH
Confidence            1223345677999999999999999999753


No 175
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=1.8e-38  Score=285.96  Aligned_cols=231  Identities=23%  Similarity=0.331  Sum_probs=172.2

Q ss_pred             cccccccCCcceeeccCC-----eeEEEEcccCCc--ChhHHHHHHHHHhccCCCceeeeeeee-eeCCceeEEEeccCC
Q 039471          111 SLISFNLTNSKFFFLHSN-----EIAVKMLEHLKG--NGQEFINEVATIGRIHHFHIVRLLGFC-SEGNRRTLIYEFMPN  182 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~-----~vAvK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~~~  182 (363)
                      .++.+++|.++.+....+     .||+|.+.....  ..+.+.+|+.++++++|+||+++++++ ..++..++||||+++
T Consensus        32 ~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~  111 (298)
T 3f66_A           32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH  111 (298)
T ss_dssp             EEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTT
T ss_pred             eeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCC
Confidence            345556665555443222     289999875332  336789999999999999999999986 455688999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      ++|.+++...     ...+++..+..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++.......
T Consensus       112 ~~L~~~l~~~-----~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  183 (298)
T 3f66_A          112 GDLRNFIRNE-----THNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY  183 (298)
T ss_dssp             CBHHHHHHCT-----TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred             CCHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccccccccch
Confidence            9999999532     2568999999999999999999999   9999999999999999999999999999987654332


Q ss_pred             c--cccccccccccccCCccc--------cCceehhHHHHHHhcCCC-CCCcchhcccccchHHHHHHHhhhcccccccc
Q 039471          263 I--VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRK-NNDPAVEIQSQIYFPEWIYNRMRLGQELCLDF  331 (363)
Q Consensus       263 ~--~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (363)
                      .  .......+|..|+|||.+        +|+||||+++|||++|.. |+.......        ....+..+..     
T Consensus       184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~-----  250 (298)
T 3f66_A          184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--------ITVYLLQGRR-----  250 (298)
T ss_dssp             CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--------HHHHHHTTCC-----
T ss_pred             hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--------HHHHHhcCCC-----
Confidence            1  122345578899999987        799999999999999554 444332211        1111211111     


Q ss_pred             CCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          332 EEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       332 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       ...+...+..+.+++.+||+.||++|||++|
T Consensus       251 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~e  281 (298)
T 3f66_A          251 -LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE  281 (298)
T ss_dssp             -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             -CCCCccCCHHHHHHHHHHcCCChhhCcCHHH
Confidence             1122334567999999999999999999854


No 176
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=3.3e-38  Score=289.76  Aligned_cols=238  Identities=21%  Similarity=0.252  Sum_probs=181.2

Q ss_pred             ccccccccCCcceeeccCCeeEEEEcccCCcChhHHHHHHHHHhc--cCCCceeeeeeeeeeCC----ceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLHSNEIAVKMLEHLKGNGQEFINEVATIGR--IHHFHIVRLLGFCSEGN----RRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~~~lv~e~~~~~  183 (363)
                      ..++.+++|.++.....++.||||++...  ..+.+.+|.+++..  ++|+||+++++++....    ..++||||++++
T Consensus        48 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g  125 (342)
T 1b6c_B           48 ESIGKGRFGEVWRGKWRGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG  125 (342)
T ss_dssp             EEEEEETTEEEEEEEETTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTC
T ss_pred             eeecCCCCcEEEEEEEcCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCC
Confidence            44566677777666666777999998633  34677889888887  78999999999998765    789999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCCCceecCCCCCceEEcCCCCeeEeccccce
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLH--------QGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK  255 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~  255 (363)
                      +|.+++..       ..+++..++.++.|++.||.|||        +   .+|+||||||+|||++.++.+||+|||++.
T Consensus       126 ~L~~~l~~-------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~  195 (342)
T 1b6c_B          126 SLFDYLNR-------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADLGLAV  195 (342)
T ss_dssp             BHHHHHHH-------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             cHHHHHhc-------cCccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECCCCCEEEEECCCce
Confidence            99999943       35899999999999999999999        7   899999999999999999999999999998


Q ss_pred             eccCCcccc--ccccccccccccCCccc--------------cCceehhHHHHHHhcC----------CCCCCcchhccc
Q 039471          256 LCSKDISIV--SRTAARGTSGYIAPELF--------------SRNFCYGMMLLEMVGC----------RKNNDPAVEIQS  309 (363)
Q Consensus       256 ~~~~~~~~~--~~~~~~gt~~y~aPE~~--------------~Di~slG~il~el~~g----------~~~~~~~~~~~~  309 (363)
                      .........  ......||..|+|||++              +|+||||+++|||++|          ..||........
T Consensus       196 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~  275 (342)
T 1b6c_B          196 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  275 (342)
T ss_dssp             EEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             eccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcc
Confidence            776543221  12445689999999975              6999999999999999          566654322111


Q ss_pred             ccchHHHHHHHhhhccccccccCCC-CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          310 QIYFPEWIYNRMRLGQELCLDFEED-GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                        .... +...+... ......... .....+..+.+++.+||+.||++|||++|
T Consensus       276 --~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~  326 (342)
T 1b6c_B          276 --SVEE-MRKVVCEQ-KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR  326 (342)
T ss_dssp             --CHHH-HHHHHTTS-CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             --cHHH-HHHHHHHH-HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHH
Confidence              1111 11221111 111111111 23467788999999999999999999864


No 177
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.2e-38  Score=293.84  Aligned_cols=238  Identities=18%  Similarity=0.212  Sum_probs=172.4

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeC------CceeEEEe
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEG------NRRTLIYE  178 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~lv~e  178 (363)
                      ..++.+++|.+..+...  ++.||||++......   .+++.+|+.++++++|+||+++++++...      ...++|||
T Consensus        31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e  110 (367)
T 1cm8_A           31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMP  110 (367)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEE
T ss_pred             EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEe
Confidence            34455566655554432  445999999643322   35788999999999999999999998765      34699999


Q ss_pred             ccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceecc
Q 039471          179 FMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS  258 (363)
Q Consensus       179 ~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~  258 (363)
                      |+ +++|.+++..       ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       111 ~~-~~~L~~~~~~-------~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  179 (367)
T 1cm8_A          111 FM-GTDLGKLMKH-------EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQAD  179 (367)
T ss_dssp             CC-SEEHHHHHHH-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             cC-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence            99 7899999853       358999999999999999999999   999999999999999999999999999998765


Q ss_pred             CCccccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchH-------HHHHHHh-
Q 039471          259 KDISIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFP-------EWIYNRM-  321 (363)
Q Consensus       259 ~~~~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~-------~~~~~~~-  321 (363)
                      ...     ....+|..|+|||++         +|+||+||+++||++|+.||...........+.       ......+ 
T Consensus       180 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~  254 (367)
T 1cm8_A          180 SEM-----TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ  254 (367)
T ss_dssp             SSC-----CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred             ccc-----CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence            432     345689999999986         799999999999999999998654322110000       0000000 


Q ss_pred             --------hhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          322 --------RLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       322 --------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                              ..-...............++.+.+++.+||+.||++|||++|
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e  304 (367)
T 1cm8_A          255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGE  304 (367)
T ss_dssp             CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             hHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHH
Confidence                    000000000001112344678999999999999999999753


No 178
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=3.2e-38  Score=285.23  Aligned_cols=232  Identities=19%  Similarity=0.243  Sum_probs=178.6

Q ss_pred             cccccccccCCcceeecc--CCeeEEEEcccC-----CcChhHHHHHHHHHhccCCCceeeeeeee--eeCCceeEEEec
Q 039471          109 FQSLISFNLTNSKFFFLH--SNEIAVKMLEHL-----KGNGQEFINEVATIGRIHHFHIVRLLGFC--SEGNRRTLIYEF  179 (363)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~--~~~~~~~lv~e~  179 (363)
                      ...++.+++|.++.+...  +..||+|++...     ....+.+.+|+.++++++|+||+++++++  .+....++||||
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~   89 (305)
T 2wtk_C           10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY   89 (305)
T ss_dssp             CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred             eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence            345566667666655543  334999998643     23346889999999999999999999998  455688999999


Q ss_pred             cCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccC
Q 039471          180 MPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSK  259 (363)
Q Consensus       180 ~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~  259 (363)
                      ++++ |.+++....    ...+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++.....
T Consensus        90 ~~~~-l~~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  161 (305)
T 2wtk_C           90 CVCG-MQEMLDSVP----EKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP  161 (305)
T ss_dssp             CSEE-HHHHHHHST----TCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             ccCC-HHHHHHhCc----ccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence            9875 777775433    2569999999999999999999999   9999999999999999999999999999987754


Q ss_pred             CccccccccccccccccCCccc----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcccccc
Q 039471          260 DISIVSRTAARGTSGYIAPELF----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCL  329 (363)
Q Consensus       260 ~~~~~~~~~~~gt~~y~aPE~~----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (363)
                      ...........||..|+|||++          +|+||||+++|||++|+.||.......        ....+..+..   
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~i~~~~~---  230 (305)
T 2wtk_C          162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK--------LFENIGKGSY---  230 (305)
T ss_dssp             TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--------HHHHHHHCCC---
T ss_pred             cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH--------HHHHHhcCCC---
Confidence            3322223455689999999976          799999999999999999997643211        2222222211   


Q ss_pred             ccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          330 DFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       330 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                          ..+...+..+.+++.+||+.||++|||++|
T Consensus       231 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  260 (305)
T 2wtk_C          231 ----AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQ  260 (305)
T ss_dssp             ----CCCSSSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             ----CCCCccCHHHHHHHHHHccCChhhCCCHHH
Confidence                122234567899999999999999999854


No 179
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.4e-38  Score=292.93  Aligned_cols=239  Identities=23%  Similarity=0.257  Sum_probs=176.5

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC------cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK------GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMP  181 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  181 (363)
                      ..++.+++|.++.+...  ++.||||++....      ...+.+.+|+.++++++|+||+++++++.+.+..++||||++
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   95 (346)
T 1ua2_A           16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME   95 (346)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred             eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCC
Confidence            44555566655555443  4459999996422      123578899999999999999999999999999999999998


Q ss_pred             CCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCc
Q 039471          182 NGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       182 ~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~  261 (363)
                      + +|.+++...     ...+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        96 ~-~l~~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~  166 (346)
T 1ua2_A           96 T-DLEVIIKDN-----SLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN  166 (346)
T ss_dssp             E-EHHHHHTTC-----CSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred             C-CHHHHHHhc-----CcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence            6 899888432     2568899999999999999999999   999999999999999999999999999998765432


Q ss_pred             cccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcccc-----
Q 039471          262 SIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQEL-----  327 (363)
Q Consensus       262 ~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  327 (363)
                      ..  .....||+.|+|||++         +|+||||+++|||++|.+||.........    ..+..........     
T Consensus       167 ~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~  240 (346)
T 1ua2_A          167 RA--YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL----TRIFETLGTPTEEQWPDM  240 (346)
T ss_dssp             CC--CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHHHCCCCTTTSSST
T ss_pred             cc--CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHH----HHHHHHcCCCChhhhhhh
Confidence            21  2345689999999987         79999999999999999998765432211    0111111000000     


Q ss_pred             -------ccccCCC-----CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          328 -------CLDFEED-----GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       328 -------~~~~~~~-----~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                             .......     .....+..+.+++.+||+.||++|||++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  288 (346)
T 1ua2_A          241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQ  288 (346)
T ss_dssp             TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHH
T ss_pred             ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHH
Confidence                   0000000     01234578999999999999999999864


No 180
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=2.2e-38  Score=286.21  Aligned_cols=228  Identities=17%  Similarity=0.277  Sum_probs=181.0

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccC--CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHL--KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ..++.+++|.++.+...  +..||||++...  ....+.+.+|+.++++++|+||+++++++.++...++||||+++++|
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  107 (303)
T 3a7i_A           28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA  107 (303)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred             hhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcH
Confidence            33455556555554332  445999998644  33457899999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      .+++.       ...+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++........  .
T Consensus       108 ~~~~~-------~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~  175 (303)
T 3a7i_A          108 LDLLE-------PGPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--K  175 (303)
T ss_dssp             HHHHT-------TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC--C
T ss_pred             HHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCcccc--c
Confidence            99983       2468999999999999999999999   9999999999999999999999999999987655432  1


Q ss_pred             cccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcH
Q 039471          266 RTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDE  337 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (363)
                      .....|+..|+|||++        +|+||||+++|||++|+.||.......        ....+.....      .....
T Consensus       176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~------~~~~~  241 (303)
T 3a7i_A          176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--------VLFLIPKNNP------PTLEG  241 (303)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HHHHHHHSCC------CCCCS
T ss_pred             cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--------HHHHhhcCCC------CCCcc
Confidence            2445689999999987        799999999999999999987543221        1111111111      11223


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          338 GIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       338 ~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .++..+.+++.+||+.||++|||++|
T Consensus       242 ~~~~~l~~li~~~l~~dp~~Rps~~~  267 (303)
T 3a7i_A          242 NYSKPLKEFVEACLNKEPSFRPTAKE  267 (303)
T ss_dssp             SCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             ccCHHHHHHHHHHcCCChhhCcCHHH
Confidence            44567999999999999999999854


No 181
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=6.8e-39  Score=291.03  Aligned_cols=236  Identities=27%  Similarity=0.378  Sum_probs=179.1

Q ss_pred             ccccccCCcceeec-------cCCeeEEEEcccCCc--ChhHHHHHHHHHhcc-CCCceeeeeeeeeeCC-ceeEEEecc
Q 039471          112 LISFNLTNSKFFFL-------HSNEIAVKMLEHLKG--NGQEFINEVATIGRI-HHFHIVRLLGFCSEGN-RRTLIYEFM  180 (363)
Q Consensus       112 ~~~~~~~~~~~~~~-------~~~~vAvK~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~-~~~lv~e~~  180 (363)
                      ++.+++|.++.+..       .++.||||++.....  ..+.+.+|+.++.++ +|+||+++++++...+ ..++||||+
T Consensus        35 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~  114 (316)
T 2xir_A           35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC  114 (316)
T ss_dssp             EEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECC
T ss_pred             EcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcC
Confidence            44555555544432       123499999975432  235788999999999 6999999999987654 589999999


Q ss_pred             CCCCHHHHhhhcCCCC----------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEec
Q 039471          181 PNGSLQKFIFSKTNSS----------SHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISD  250 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~D  250 (363)
                      ++++|.+++.......          ....+++..+..++.|++.||.|||+   .+|+||||||+||+++.++.+||+|
T Consensus       115 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~D  191 (316)
T 2xir_A          115 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICD  191 (316)
T ss_dssp             TTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             CCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEECC
Confidence            9999999996543210          02238999999999999999999999   9999999999999999999999999


Q ss_pred             cccceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHh
Q 039471          251 FGLAKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRM  321 (363)
Q Consensus       251 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~  321 (363)
                      ||+++...............+|..|+|||++        +|+||||+++|||++ |+.||........       ....+
T Consensus       192 fg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-------~~~~~  264 (316)
T 2xir_A          192 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-------FCRRL  264 (316)
T ss_dssp             CGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH-------HHHHH
T ss_pred             CccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH-------HHHHh
Confidence            9999877654433333455678899999987        799999999999998 9999865432211       22222


Q ss_pred             hhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          322 RLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+..      ...+...++.+.+++.+||+.||++|||++|
T Consensus       265 ~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e  300 (316)
T 2xir_A          265 KEGTR------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE  300 (316)
T ss_dssp             HHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ccCcc------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            22211      1122335677999999999999999999864


No 182
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=1.8e-38  Score=289.99  Aligned_cols=240  Identities=23%  Similarity=0.345  Sum_probs=181.5

Q ss_pred             ccccccccCCcceeec------cCCeeEEEEcccCCc-ChhHHHHHHHHHhccCCCceeeeeeeee--eCCceeEEEecc
Q 039471          110 QSLISFNLTNSKFFFL------HSNEIAVKMLEHLKG-NGQEFINEVATIGRIHHFHIVRLLGFCS--EGNRRTLIYEFM  180 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~------~~~~vAvK~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~~  180 (363)
                      ..++.+++|.++.+..      .+..||||++..... ..+.+.+|++++++++|+||+++++++.  +....++||||+
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~  108 (327)
T 3lxl_A           29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL  108 (327)
T ss_dssp             EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECC
T ss_pred             hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeec
Confidence            3345555555554432      233499999975432 3356899999999999999999999886  456789999999


Q ss_pred             CCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCC
Q 039471          181 PNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD  260 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~  260 (363)
                      ++++|.+++....     ..+++..++.++.|++.||+|||+   .+|+|+||||+|||++.++.+||+|||++......
T Consensus       109 ~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~  180 (327)
T 3lxl_A          109 PSGCLRDFLQRHR-----ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD  180 (327)
T ss_dssp             TTCBHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred             CCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence            9999999996432     458999999999999999999999   99999999999999999999999999999887654


Q ss_pred             cccc-ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhccc-------ccchHHHHHHHhhhc
Q 039471          261 ISIV-SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQS-------QIYFPEWIYNRMRLG  324 (363)
Q Consensus       261 ~~~~-~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~  324 (363)
                      .... ......+|..|+|||++        +|+||||+++|||++|+.||........       .......+...+..+
T Consensus       181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (327)
T 3lxl_A          181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG  260 (327)
T ss_dssp             CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT
T ss_pred             CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc
Confidence            3321 22345578889999987        8999999999999999999865443210       001111112222211


Q ss_pred             cccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          325 QELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                            .....+..+++.+.+++.+||+.||++|||++|
T Consensus       261 ------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~e  293 (327)
T 3lxl_A          261 ------QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSA  293 (327)
T ss_dssp             ------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ------cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHH
Confidence                  112234456778999999999999999999864


No 183
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=1.9e-38  Score=282.61  Aligned_cols=225  Identities=23%  Similarity=0.357  Sum_probs=172.2

Q ss_pred             ccccccCCcceeecc--CCeeEEEEcccC----CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          112 LISFNLTNSKFFFLH--SNEIAVKMLEHL----KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~--~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ++.+++|.++.+...  ++.||||++...    ....+.+.+|+.++++++|+||+++++++.+.+..++||||+++++|
T Consensus        19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   98 (276)
T 2h6d_A           19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL   98 (276)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred             ecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcH
Confidence            455555555544433  455999998632    33456889999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      .+++...      ..+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++.........  
T Consensus        99 ~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~--  167 (276)
T 2h6d_A           99 FDYICKH------GRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL--  167 (276)
T ss_dssp             HHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC------
T ss_pred             HHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCcce--
Confidence            9999543      458999999999999999999999   99999999999999999999999999999876544321  


Q ss_pred             cccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCc
Q 039471          266 RTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGD  336 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                       ....++..|+|||.+         +|+||||+++|||++|+.||.......        ....+..+..       ..+
T Consensus       168 -~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~~-------~~~  231 (276)
T 2h6d_A          168 -RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT--------LFKKIRGGVF-------YIP  231 (276)
T ss_dssp             ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCC-------CCC
T ss_pred             -ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--------HHHHhhcCcc-------cCc
Confidence             344589999999987         799999999999999999997543211        2222222211       112


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          337 EGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       337 ~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...+..+.+++.+||+.||++|||++|
T Consensus       232 ~~~~~~l~~li~~~l~~~p~~Rps~~~  258 (276)
T 2h6d_A          232 EYLNRSVATLLMHMLQVDPLKRATIKD  258 (276)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             hhcCHHHHHHHHHHccCChhhCCCHHH
Confidence            334567999999999999999999854


No 184
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=7.8e-39  Score=292.67  Aligned_cols=237  Identities=22%  Similarity=0.258  Sum_probs=168.2

Q ss_pred             cccccccCCcceeec--cCCeeEEEEcccCCc---ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          111 SLISFNLTNSKFFFL--HSNEIAVKMLEHLKG---NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      .++.+++|.++.+..  .++.||||++.....   ..+.+.+|+.++++++|+||+++++++.++...++||||++ ++|
T Consensus        41 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L  119 (329)
T 3gbz_A           41 KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDL  119 (329)
T ss_dssp             EEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-EEH
T ss_pred             EEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-CCH
Confidence            345556665555532  344599999964332   23567899999999999999999999999999999999997 499


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEc-----CCCCeeEeccccceeccCC
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD-----HNFQPKISDFGLAKLCSKD  260 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~-----~~~~~kl~Dfg~a~~~~~~  260 (363)
                      .+++...      ..+++..++.++.||+.||+|||+   .+|+||||||+|||++     .++.+||+|||+++.....
T Consensus       120 ~~~~~~~------~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~  190 (329)
T 3gbz_A          120 KKYMDKN------PDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP  190 (329)
T ss_dssp             HHHHHHC------TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred             HHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence            9999543      458999999999999999999999   9999999999999994     4555999999999876543


Q ss_pred             ccccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcccc----
Q 039471          261 ISIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQEL----  327 (363)
Q Consensus       261 ~~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  327 (363)
                      ...  .....||..|+|||++         +||||||+++|||++|+.||...........    +..........    
T Consensus       191 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~----~~~~~~~~~~~~~~~  264 (329)
T 3gbz_A          191 IRQ--FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK----IFEVLGLPDDTTWPG  264 (329)
T ss_dssp             -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHHHCCCCTTTSTT
T ss_pred             ccc--cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHH----HHHHhCCCchhhhhh
Confidence            221  2344579999999987         7999999999999999999976544321100    11100000000    


Q ss_pred             ----------ccccCCC-----CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          328 ----------CLDFEED-----GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       328 ----------~~~~~~~-----~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                                .......     .....+.++.+++.+||+.||++|||++|
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  315 (329)
T 3gbz_A          265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKN  315 (329)
T ss_dssp             GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHH
Confidence                      0000000     01114577899999999999999999864


No 185
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=3.5e-38  Score=290.23  Aligned_cols=240  Identities=15%  Similarity=0.122  Sum_probs=172.8

Q ss_pred             ccccccccCCcceeecc-----CCeeEEEEcccCCc------------ChhHHHHHHHHHhccCCCceeeeeeeeee---
Q 039471          110 QSLISFNLTNSKFFFLH-----SNEIAVKMLEHLKG------------NGQEFINEVATIGRIHHFHIVRLLGFCSE---  169 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~-----~~~vAvK~~~~~~~------------~~~~~~~E~~~l~~l~h~niv~~~~~~~~---  169 (363)
                      ..++.+++|.++.+...     ...||||+......            ..+.+.+|+..++.++|+||+++++++..   
T Consensus        43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~  122 (345)
T 2v62_A           43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFK  122 (345)
T ss_dssp             EEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESS
T ss_pred             eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccC
Confidence            34566667766666553     33499999875432            22357788889999999999999999977   


Q ss_pred             -CCceeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCC--Ce
Q 039471          170 -GNRRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF--QP  246 (363)
Q Consensus       170 -~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~--~~  246 (363)
                       +...++||||+ +++|.+++..      ...+++..++.++.||+.||+|||+   .+|+||||||+|||++.++  .+
T Consensus       123 ~~~~~~lv~e~~-~~~L~~~l~~------~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~  192 (345)
T 2v62_A          123 GRSYRFMVMERL-GIDLQKISGQ------NGTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPDQV  192 (345)
T ss_dssp             SCEEEEEEEECE-EEEHHHHCBG------GGBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSSTTSE
T ss_pred             CCcEEEEEEecc-CCCHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCCCcE
Confidence             67899999999 8999999943      2479999999999999999999999   9999999999999999877  99


Q ss_pred             eEeccccceeccCCccc-----cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccch
Q 039471          247 KISDFGLAKLCSKDISI-----VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYF  313 (363)
Q Consensus       247 kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~  313 (363)
                      ||+|||+++........     .......||..|+|||++        +||||||+++|||++|+.||..........  
T Consensus       193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~--  270 (345)
T 2v62_A          193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV--  270 (345)
T ss_dssp             EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH--
T ss_pred             EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH--
Confidence            99999999877543221     111345689999999987        899999999999999999996533222110  


Q ss_pred             HHHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          314 PEWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       .......... ..............+..+.+++.+||+.||++|||++|
T Consensus       271 -~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  318 (345)
T 2v62_A          271 -QTAKTNLLDE-LPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQA  318 (345)
T ss_dssp             -HHHHHHHHHT-TTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHH
T ss_pred             -HHHHHhhccc-ccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHH
Confidence             0011111000 00000000001135568999999999999999999863


No 186
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=1.2e-38  Score=285.16  Aligned_cols=226  Identities=21%  Similarity=0.293  Sum_probs=176.0

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC---cChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK---GNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ..++.+++|.++.+...  ++.||||++....   ....++.+|+..+.++ +|+||+++++++.+++..++||||++++
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   96 (289)
T 1x8b_A           17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGG   96 (289)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred             hhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCC
Confidence            34455566655555443  4559999987532   2345788999999999 8999999999999999999999999999


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCC-------------------C
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHN-------------------F  244 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~-------------------~  244 (363)
                      +|.+++.....  ....+++..++.++.||+.||+|||+   .+|+||||||+|||++.+                   .
T Consensus        97 ~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~  171 (289)
T 1x8b_A           97 SLADAISENYR--IMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV  171 (289)
T ss_dssp             BHHHHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC--------------------CC
T ss_pred             cHHHHHHhhcc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence            99999965421  12568999999999999999999999   999999999999999844                   4


Q ss_pred             CeeEeccccceeccCCccccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHH
Q 039471          245 QPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPE  315 (363)
Q Consensus       245 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~  315 (363)
                      .+||+|||.+.......      ...||..|+|||++         +||||||+++|||++|.+++.....         
T Consensus       172 ~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---------  236 (289)
T 1x8b_A          172 MFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---------  236 (289)
T ss_dssp             CEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---------
T ss_pred             EEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---------
Confidence            79999999998765432      23489999999987         7999999999999999987654321         


Q ss_pred             HHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          316 WIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                        ...+..+..      ...+..+++.+.+++.+||+.||++|||++|
T Consensus       237 --~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  276 (289)
T 1x8b_A          237 --WHEIRQGRL------PRIPQVLSQEFTELLKVMIHPDPERRPSAMA  276 (289)
T ss_dssp             --HHHHHTTCC------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             --HHHHHcCCC------CCCCcccCHHHHHHHHHHhCCCcccCCCHHH
Confidence              111211111      1222345677999999999999999999854


No 187
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=1.2e-38  Score=290.53  Aligned_cols=231  Identities=21%  Similarity=0.321  Sum_probs=174.0

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC---------cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEe
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK---------GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYE  178 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  178 (363)
                      ..++.+++|.++.+...  ++.||||++....         .....+.+|+.++++++|+||+++++++..+. .++|||
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e   94 (322)
T 2ycf_A           16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLE   94 (322)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEE
T ss_pred             eEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEe
Confidence            34455666655555433  3449999986432         12246889999999999999999999987655 899999


Q ss_pred             ccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCC---eeEeccccce
Q 039471          179 FMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ---PKISDFGLAK  255 (363)
Q Consensus       179 ~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~---~kl~Dfg~a~  255 (363)
                      |+++++|.+++.      ....+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.   +||+|||+++
T Consensus        95 ~~~~~~L~~~~~------~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  165 (322)
T 2ycf_A           95 LMEGGELFDKVV------GNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  165 (322)
T ss_dssp             CCTTEETHHHHS------TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred             cCCCCcHHHHHh------ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence            999999999983      33579999999999999999999999   99999999999999987654   9999999998


Q ss_pred             eccCCccccccccccccccccCCccc-----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhc
Q 039471          256 LCSKDISIVSRTAARGTSGYIAPELF-----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLG  324 (363)
Q Consensus       256 ~~~~~~~~~~~~~~~gt~~y~aPE~~-----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (363)
                      ........   ....||..|+|||++           +|+||||+++|||++|+.||........       +...+..+
T Consensus       166 ~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------~~~~~~~~  235 (322)
T 2ycf_A          166 ILGETSLM---RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-------LKDQITSG  235 (322)
T ss_dssp             ECCCCHHH---HHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-------HHHHHHHT
T ss_pred             eccccccc---ccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-------HHHHHHhC
Confidence            87544321   334589999999984           7999999999999999999976543222       11122211


Q ss_pred             cccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          325 QELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...   .........+..+.+++.+||+.||++|||++|
T Consensus       236 ~~~---~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~  271 (322)
T 2ycf_A          236 KYN---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE  271 (322)
T ss_dssp             CCC---CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             ccc---cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHH
Confidence            110   000111234678999999999999999999753


No 188
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=8e-39  Score=285.53  Aligned_cols=233  Identities=21%  Similarity=0.273  Sum_probs=178.9

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCc---ChhHHHHHHHHHhccCCCceeeeeeeee--eCCceeEEEeccCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKG---NGQEFINEVATIGRIHHFHIVRLLGFCS--EGNRRTLIYEFMPN  182 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~~~~  182 (363)
                      ..++.+++|.++.+...  ++.||+|++.....   ..+.+.+|+.++++++|+||+++++++.  .+...++||||+++
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~   91 (279)
T 2w5a_A           12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG   91 (279)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTT
T ss_pred             hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCC
Confidence            34455666665555443  44499999975432   3357889999999999999999999874  46789999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-----ceecCCCCCceEEcCCCCeeEeccccceec
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQR-----ILHFDIKPHNILLDHNFQPKISDFGLAKLC  257 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----i~H~dikp~Nill~~~~~~kl~Dfg~a~~~  257 (363)
                      ++|.+++.....  ....+++..++.++.|++.||+|||+   .+     ++|+||||+||+++.++.+||+|||.+...
T Consensus        92 ~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~  166 (279)
T 2w5a_A           92 GDLASVITKGTK--ERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL  166 (279)
T ss_dssp             EEHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCCHHHHC
T ss_pred             CCHHHHHHhhcc--cCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCchheee
Confidence            999999965432  23559999999999999999999999   78     999999999999999999999999999876


Q ss_pred             cCCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcccccc
Q 039471          258 SKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCL  329 (363)
Q Consensus       258 ~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (363)
                      ......  .....|+..|+|||++        +|+||||+++|||++|+.||.......        +...+..+..   
T Consensus       167 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~i~~~~~---  233 (279)
T 2w5a_A          167 NHDTSF--AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--------LAGKIREGKF---  233 (279)
T ss_dssp             ---CHH--HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHTCC---
T ss_pred             cccccc--ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH--------HHHHHhhccc---
Confidence            543321  1234589999999987        899999999999999999987653221        2222222221   


Q ss_pred             ccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          330 DFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       330 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                         ...+..++..+.+++.+||+.||++|||++|
T Consensus       234 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~  264 (279)
T 2w5a_A          234 ---RRIPYRYSDELNEIITRMLNLKDYHRPSVEE  264 (279)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ---ccCCcccCHHHHHHHHHHcCCCcccCCCHHH
Confidence               1223345678999999999999999999864


No 189
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=6.1e-38  Score=284.66  Aligned_cols=231  Identities=21%  Similarity=0.298  Sum_probs=180.2

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHHH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQK  187 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~  187 (363)
                      ..++.+++|.++.+...  ++.||||++.... ..+++.+|+.++++++|+||+++++++...+..++||||+++++|.+
T Consensus        35 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~  113 (314)
T 3com_A           35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD  113 (314)
T ss_dssp             EECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHH
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHH
Confidence            33455555555555443  4459999997543 45789999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccccc
Q 039471          188 FIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRT  267 (363)
Q Consensus       188 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~  267 (363)
                      ++....     ..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||.+........  ...
T Consensus       114 ~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~  183 (314)
T 3com_A          114 IIRLRN-----KTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA--KRN  183 (314)
T ss_dssp             HHHHHT-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS--CBC
T ss_pred             HHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc--ccC
Confidence            985332     568999999999999999999999   9999999999999999999999999999987654322  123


Q ss_pred             cccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHH
Q 039471          268 AARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGI  339 (363)
Q Consensus       268 ~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (363)
                      ...|+..|+|||++        +|+||||+++|||++|+.||........       . ..+.....    .....+..+
T Consensus       184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-------~-~~~~~~~~----~~~~~~~~~  251 (314)
T 3com_A          184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA-------I-FMIPTNPP----PTFRKPELW  251 (314)
T ss_dssp             CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-------H-HHHHHSCC----CCCSSGGGS
T ss_pred             ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH-------H-HHHhcCCC----cccCCcccC
Confidence            45689999999987        7999999999999999999975433211       1 11111111    111223345


Q ss_pred             HHHHHHHHHHhccCCCCCCCCCCC
Q 039471          340 ARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       340 ~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +..+.+++.+||+.||++|||++|
T Consensus       252 ~~~l~~li~~~l~~dp~~Rpt~~~  275 (314)
T 3com_A          252 SDNFTDFVKQCLVKSPEQRATATQ  275 (314)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHH
Confidence            678999999999999999999753


No 190
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=2.3e-38  Score=299.61  Aligned_cols=183  Identities=21%  Similarity=0.297  Sum_probs=151.5

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhcc------CCCceeeeeeeeeeCCceeEEEeccCC
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRI------HHFHIVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      .++.+++|.++.+...  +..||||++.......+.+.+|+++++.+      +|+||+++++++......++||||+. 
T Consensus       104 ~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-  182 (429)
T 3kvw_A          104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS-  182 (429)
T ss_dssp             EEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC-
T ss_pred             EcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC-
Confidence            3455555555544333  34499999986555556788899888887      46799999999999999999999996 


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCC--eeEeccccceeccCC
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ--PKISDFGLAKLCSKD  260 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~--~kl~Dfg~a~~~~~~  260 (363)
                      ++|.+++.....    ..+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.  +||+|||++......
T Consensus       183 ~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~  255 (429)
T 3kvw_A          183 MNLYELIKKNKF----QGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR  255 (429)
T ss_dssp             CBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC
T ss_pred             CCHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccceecCCc
Confidence            699999965432    459999999999999999999999   99999999999999999887  999999999765433


Q ss_pred             ccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchh
Q 039471          261 ISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVE  306 (363)
Q Consensus       261 ~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~  306 (363)
                      .     ....||+.|+|||++        +|||||||++|||++|++||.....
T Consensus       256 ~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~  304 (429)
T 3kvw_A          256 V-----YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE  304 (429)
T ss_dssp             C-----CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             c-----cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence            2     345689999999987        8999999999999999999976544


No 191
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.6e-38  Score=289.95  Aligned_cols=231  Identities=21%  Similarity=0.276  Sum_probs=175.6

Q ss_pred             cccccccCCcceeec--cCCeeEEEEcccCCcChhHHHHHHHHHhcc-CCCceeeeeeeeee------CCceeEEEeccC
Q 039471          111 SLISFNLTNSKFFFL--HSNEIAVKMLEHLKGNGQEFINEVATIGRI-HHFHIVRLLGFCSE------GNRRTLIYEFMP  181 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~------~~~~~lv~e~~~  181 (363)
                      .++.+++|.++.+..  .++.||||++.......+.+.+|+.+++++ +|+||+++++++..      ....++||||++
T Consensus        31 ~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~  110 (326)
T 2x7f_A           31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCG  110 (326)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCT
T ss_pred             EeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCC
Confidence            345555555555444  344599999987666778999999999999 79999999999976      468899999999


Q ss_pred             CCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCc
Q 039471          182 NGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       182 ~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~  261 (363)
                      +++|.+++....    ...+++..++.++.||+.||.|||+   .+++|+||||+||+++.++.+||+|||++.......
T Consensus       111 ~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  183 (326)
T 2x7f_A          111 AGSVTDLIKNTK----GNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV  183 (326)
T ss_dssp             TEEHHHHHHHSG----GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCTTTC------
T ss_pred             CCcHHHHHHhcc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCc
Confidence            999999996542    2568999999999999999999999   999999999999999999999999999998765432


Q ss_pred             cccccccccccccccCCccc-------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccc
Q 039471          262 SIVSRTAARGTSGYIAPELF-------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELC  328 (363)
Q Consensus       262 ~~~~~~~~~gt~~y~aPE~~-------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (363)
                      .  ......||..|+|||++             +|+||||+++|||++|+.||........        ...+.....  
T Consensus       184 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~~~~~~~~~--  251 (326)
T 2x7f_A          184 G--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA--------LFLIPRNPA--  251 (326)
T ss_dssp             ---------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH--------HHHHHHSCC--
T ss_pred             c--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH--------HHHhhcCcc--
Confidence            1  12345689999999986             6999999999999999999965433211        111111111  


Q ss_pred             cccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          329 LDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       329 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .   ......++..+.+++.+||+.||++|||++|
T Consensus       252 ~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  283 (326)
T 2x7f_A          252 P---RLKSKKWSKKFQSFIESCLVKNHSQRPATEQ  283 (326)
T ss_dssp             C---CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             c---cCCccccCHHHHHHHHHHhccChhhCCCHHH
Confidence            0   1112334677999999999999999999753


No 192
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=1.7e-37  Score=287.73  Aligned_cols=227  Identities=15%  Similarity=0.056  Sum_probs=176.7

Q ss_pred             ccccccccCCcceee-------ccCCeeEEEEcccCCcChhHHHHHHHHHhccC---CCceeeeeeeeeeCCceeEEEec
Q 039471          110 QSLISFNLTNSKFFF-------LHSNEIAVKMLEHLKGNGQEFINEVATIGRIH---HFHIVRLLGFCSEGNRRTLIYEF  179 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~-------~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~  179 (363)
                      ..++.+++|.++.+.       ..++.||||++..  ....++.+|+.++++++   |+||+++++++..++..++||||
T Consensus        71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~  148 (365)
T 3e7e_A           71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP--ANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGEL  148 (365)
T ss_dssp             EEEEECSSEEEEEEEC-------CCCCEEEEEESS--CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECC
T ss_pred             EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC--CChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEec
Confidence            345666666666552       2234499999864  34567888888888887   99999999999999999999999


Q ss_pred             cCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcC-----------CCCeeE
Q 039471          180 MPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDH-----------NFQPKI  248 (363)
Q Consensus       180 ~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~-----------~~~~kl  248 (363)
                      +++|+|.+++..... .....+++..++.++.||+.||+|||+   .+|+||||||+|||++.           ++.+||
T Consensus       149 ~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl  224 (365)
T 3e7e_A          149 YSYGTLLNAINLYKN-TPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLAL  224 (365)
T ss_dssp             CCSCBHHHHHHHHHT-STTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC------CTTEEE
T ss_pred             cCCCcHHHHHHHhhc-ccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCccccccccCCEEE
Confidence            999999999965332 123679999999999999999999999   99999999999999998           899999


Q ss_pred             eccccceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHH
Q 039471          249 SDFGLAKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNR  320 (363)
Q Consensus       249 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~  320 (363)
                      +|||+|+...............||..|+|||++        +|||||||++|||++|+.||.........          
T Consensus       225 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~----------  294 (365)
T 3e7e_A          225 IDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK----------  294 (365)
T ss_dssp             CCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE----------
T ss_pred             eeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee----------
Confidence            999999876533222233556799999999988        79999999999999999998654332110          


Q ss_pred             hhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCC
Q 039471          321 MRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSM  361 (363)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~  361 (363)
                            ........   .....+.+++..|++.+|.+|++.
T Consensus       295 ------~~~~~~~~---~~~~~~~~~~~~~l~~~p~~r~~~  326 (365)
T 3e7e_A          295 ------PEGLFRRL---PHLDMWNEFFHVMLNIPDCHHLPS  326 (365)
T ss_dssp             ------ECSCCTTC---SSHHHHHHHHHHHHCCCCTTCCCC
T ss_pred             ------echhcccc---CcHHHHHHHHHHHcCCCCCCcchH
Confidence                  00000000   125568889999999999999653


No 193
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=6.3e-38  Score=289.15  Aligned_cols=241  Identities=18%  Similarity=0.195  Sum_probs=174.6

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC---cChhHHHHHHHHHhccCCCceeeeeeeeee--------CCceeEE
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK---GNGQEFINEVATIGRIHHFHIVRLLGFCSE--------GNRRTLI  176 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--------~~~~~lv  176 (363)
                      ..++.+++|.++.+...  ++.||||++....   .....+.+|+.++++++|+||+++++++..        .+..++|
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv  102 (351)
T 3mi9_A           23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV  102 (351)
T ss_dssp             EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEE
T ss_pred             EEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEE
Confidence            33455555555555443  4459999986432   234578899999999999999999999876        4568999


Q ss_pred             EeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEecccccee
Q 039471          177 YEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKL  256 (363)
Q Consensus       177 ~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~  256 (363)
                      |||+++ +|.+.+...     ...+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus       103 ~e~~~~-~l~~~l~~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~  173 (351)
T 3mi9_A          103 FDFCEH-DLAGLLSNV-----LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARA  173 (351)
T ss_dssp             EECCSE-EHHHHHHCT-----TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EeccCC-CHHHHHhhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence            999975 888777432     2569999999999999999999999   9999999999999999999999999999987


Q ss_pred             ccCCccc--cccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhc-
Q 039471          257 CSKDISI--VSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLG-  324 (363)
Q Consensus       257 ~~~~~~~--~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-  324 (363)
                      .......  .......||+.|+|||++         +||||||+++|||++|+.||...........    +....... 
T Consensus       174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~----i~~~~~~~~  249 (351)
T 3mi9_A          174 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL----ISQLCGSIT  249 (351)
T ss_dssp             CCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHHHHCCCC
T ss_pred             ccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH----HHHHhCCCC
Confidence            6532211  112345689999999976         7999999999999999999987543321110    10000000 


Q ss_pred             cc-------------ccc--ccCCCCcHH-----HHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          325 QE-------------LCL--DFEEDGDEG-----IARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       325 ~~-------------~~~--~~~~~~~~~-----~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..             ...  .........     .++.+.+++.+||+.||++|||++|
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  308 (351)
T 3mi9_A          250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDD  308 (351)
T ss_dssp             TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHH
Confidence            00             000  000000011     1456889999999999999999864


No 194
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=2.3e-38  Score=285.28  Aligned_cols=229  Identities=21%  Similarity=0.289  Sum_probs=179.5

Q ss_pred             ccccccCCcceeecc--CCeeEEEEcccCC----------cChhHHHHHHHHHhccC-CCceeeeeeeeeeCCceeEEEe
Q 039471          112 LISFNLTNSKFFFLH--SNEIAVKMLEHLK----------GNGQEFINEVATIGRIH-HFHIVRLLGFCSEGNRRTLIYE  178 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~--~~~vAvK~~~~~~----------~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e  178 (363)
                      ++.+++|.++.+...  ++.||||++....          ...+.+.+|+++++++. |+||+++++++..+...++|||
T Consensus        25 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e  104 (298)
T 1phk_A           25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD  104 (298)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEe
Confidence            445555555444433  3449999986432          11356789999999996 9999999999999999999999


Q ss_pred             ccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceecc
Q 039471          179 FMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS  258 (363)
Q Consensus       179 ~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~  258 (363)
                      |+++++|.+++...      ..+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++....
T Consensus       105 ~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  175 (298)
T 1phk_A          105 LMKKGELFDYLTEK------VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD  175 (298)
T ss_dssp             CCTTCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             ccCCCcHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccchhhcC
Confidence            99999999999543      468999999999999999999999   999999999999999999999999999998776


Q ss_pred             CCccccccccccccccccCCccc--------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhc
Q 039471          259 KDISIVSRTAARGTSGYIAPELF--------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLG  324 (363)
Q Consensus       259 ~~~~~~~~~~~~gt~~y~aPE~~--------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (363)
                      .....   ....++..|+|||++              +|+||||+++|||++|+.||.......        ....+..+
T Consensus       176 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~  244 (298)
T 1phk_A          176 PGEKL---REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML--------MLRMIMSG  244 (298)
T ss_dssp             TTCCB---CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHT
T ss_pred             CCccc---ccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH--------HHHHHhcC
Confidence            54332   345689999999975              699999999999999999997543221        11222211


Q ss_pred             cccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          325 QELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..   .........++..+.+++.+||+.||++|||++|
T Consensus       245 ~~---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  280 (298)
T 1phk_A          245 NY---QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE  280 (298)
T ss_dssp             CC---CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             Cc---ccCcccccccCHHHHHHHHHHccCCcccCCCHHH
Confidence            11   1111223456778999999999999999999753


No 195
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=2.7e-38  Score=282.63  Aligned_cols=222  Identities=21%  Similarity=0.313  Sum_probs=176.5

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeee----------------CC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSE----------------GN  171 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----------------~~  171 (363)
                      ..++.+++|.++.+...  ++.||+|++....   +.+.+|++++++++|+||+++++++..                ..
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (284)
T 2a19_B           17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTK   93 (284)
T ss_dssp             EEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEE
T ss_pred             eeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcc
Confidence            34566666666665544  4559999997443   567899999999999999999998854                44


Q ss_pred             ceeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEecc
Q 039471          172 RRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDF  251 (363)
Q Consensus       172 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Df  251 (363)
                      ..++||||+++++|.+++....    ...+++..++.++.|++.||.|||+   .+|+|+||||+||+++.++.+||+||
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Df  166 (284)
T 2a19_B           94 CLFIQMEFCDKGTLEQWIEKRR----GEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDF  166 (284)
T ss_dssp             EEEEEECCCCSCBHHHHHHHGG----GSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCC
T ss_pred             eEEEEEeccCCCCHHHHHhhcc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCEEECcc
Confidence            6899999999999999996543    2569999999999999999999999   99999999999999999999999999


Q ss_pred             ccceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhh
Q 039471          252 GLAKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRL  323 (363)
Q Consensus       252 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (363)
                      |++.........   ....|+..|+|||++        +|+||||+++|||++|..|+.....          ....+..
T Consensus       167 g~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----------~~~~~~~  233 (284)
T 2a19_B          167 GLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK----------FFTDLRD  233 (284)
T ss_dssp             TTCEESSCCSCC---CCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH----------HHHHHHT
T ss_pred             hhheeccccccc---cccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH----------HHHHhhc
Confidence            999887654322   345689999999987        8999999999999999988643211          1111111


Q ss_pred             ccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          324 GQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +.         .+..++..+.+++.+||+.||++|||++|
T Consensus       234 ~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~e  264 (284)
T 2a19_B          234 GI---------ISDIFDKKEKTLLQKLLSKKPEDRPNTSE  264 (284)
T ss_dssp             TC---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             cc---------ccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            11         12234567899999999999999999854


No 196
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=2.4e-38  Score=285.61  Aligned_cols=232  Identities=20%  Similarity=0.296  Sum_probs=177.7

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccC-CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHL-KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~  186 (363)
                      ..++.+++|.++.+...  +..||+|++... ....+.+.+|+.++++++|+||+++++++..++..++||||+++++|.
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~  104 (302)
T 2j7t_A           25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVD  104 (302)
T ss_dssp             EEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHH
T ss_pred             ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHH
Confidence            44566666666665554  444999998643 345578999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccccc
Q 039471          187 KFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSR  266 (363)
Q Consensus       187 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~  266 (363)
                      +++....     ..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++........  ..
T Consensus       105 ~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~  174 (302)
T 2j7t_A          105 AIMLELD-----RGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ--KR  174 (302)
T ss_dssp             HHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH--C-
T ss_pred             HHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc--cc
Confidence            9985432     569999999999999999999999   9999999999999999999999999998764322111  11


Q ss_pred             ccccccccccCCccc-------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCC
Q 039471          267 TAARGTSGYIAPELF-------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEE  333 (363)
Q Consensus       267 ~~~~gt~~y~aPE~~-------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (363)
                      ....||..|+|||++             +|+||||+++|||++|+.|+.......        ....+......    ..
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~----~~  242 (302)
T 2j7t_A          175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR--------VLLKIAKSDPP----TL  242 (302)
T ss_dssp             ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--------HHHHHHHSCCC----CC
T ss_pred             ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH--------HHHHHhccCCc----cc
Confidence            334689999999975             799999999999999999987643321        11111111111    11


Q ss_pred             CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          334 DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       334 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+..++..+.+++.+||+.||++|||++|
T Consensus       243 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  272 (302)
T 2j7t_A          243 LTPSKWSVEFRDFLKIALDKNPETRPSAAQ  272 (302)
T ss_dssp             SSGGGSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             CCccccCHHHHHHHHHHcccChhhCCCHHH
Confidence            223455678999999999999999999753


No 197
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=3.9e-38  Score=290.05  Aligned_cols=242  Identities=21%  Similarity=0.239  Sum_probs=184.6

Q ss_pred             cccccccccCCcceeeccCCeeEEEEcccCCcC----h--------------hHHHHHHHHHhccCCCceeeeeeeeeeC
Q 039471          109 FQSLISFNLTNSKFFFLHSNEIAVKMLEHLKGN----G--------------QEFINEVATIGRIHHFHIVRLLGFCSEG  170 (363)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~----~--------------~~~~~E~~~l~~l~h~niv~~~~~~~~~  170 (363)
                      ...++.+++|.++.+...++.||||++......    .              +.+.+|+.++++++|+||+++++++.+.
T Consensus        36 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  115 (348)
T 2pml_X           36 IRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNY  115 (348)
T ss_dssp             EEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESS
T ss_pred             EEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeC
Confidence            344567777777766665666999998632211    1              7899999999999999999999999999


Q ss_pred             CceeEEEeccCCCCHHHHhhhcC--CCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeE
Q 039471          171 NRRTLIYEFMPNGSLQKFIFSKT--NSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKI  248 (363)
Q Consensus       171 ~~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl  248 (363)
                      +..++||||+++++|.+++....  .......+++..++.++.|++.||+|||+  ..+++|+||||+||+++.++.+||
T Consensus       116 ~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~~~~~~kl  193 (348)
T 2pml_X          116 DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKL  193 (348)
T ss_dssp             SEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEECTTSCEEE
T ss_pred             CeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEcCCCcEEE
Confidence            99999999999999999832110  01114679999999999999999999996  379999999999999999999999


Q ss_pred             eccccceeccCCccccccccccccccccCCccc----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHH
Q 039471          249 SDFGLAKLCSKDISIVSRTAARGTSGYIAPELF----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIY  318 (363)
Q Consensus       249 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~  318 (363)
                      +|||.+.......    .....|+..|+|||++          +|+||||+++|||++|+.||........       ..
T Consensus       194 ~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------~~  262 (348)
T 2pml_X          194 SDFGESEYMVDKK----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE-------LF  262 (348)
T ss_dssp             CCCTTCEECBTTE----ECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH-------HH
T ss_pred             ecccccccccccc----ccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-------HH
Confidence            9999998765442    2445689999999987          7999999999999999999976543211       22


Q ss_pred             HHhhhcccccccc------------CCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          319 NRMRLGQELCLDF------------EEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       319 ~~~~~~~~~~~~~------------~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+..+.......            ........+..+.+++.+||+.||++|||++|
T Consensus       263 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e  319 (348)
T 2pml_X          263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSED  319 (348)
T ss_dssp             HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHH
Confidence            2222221110000            00011445678999999999999999999854


No 198
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=6.3e-38  Score=282.52  Aligned_cols=240  Identities=22%  Similarity=0.306  Sum_probs=177.7

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC---cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK---GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ..++.+++|.++.+...  ++.||||++....   ...+.+.+|+.++++++|+||+++++++..++..++||||++ ++
T Consensus         9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~   87 (299)
T 2r3i_A            9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QD   87 (299)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred             hhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-CC
Confidence            34455566655555433  4459999986432   234688999999999999999999999999999999999997 59


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      |.+++.....    ..+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++......... 
T Consensus        88 L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~-  159 (299)
T 2r3i_A           88 LKKFMDASAL----TGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT-  159 (299)
T ss_dssp             HHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC-
T ss_pred             HHHHHHhhhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc-
Confidence            9999965432    468999999999999999999999   99999999999999999999999999999876543221 


Q ss_pred             ccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccc---------
Q 039471          265 SRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQE---------  326 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  326 (363)
                       .....+|..|+|||++         +|+||||+++|||++|+.||..........    .+.........         
T Consensus       160 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  234 (299)
T 2r3i_A          160 -YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF----RIFRTLGTPDEVVWPGVTSM  234 (299)
T ss_dssp             -TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH----HHHHHHCCCCTTTSTTGGGS
T ss_pred             -cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHH----HHHHHhCCCchhhhhHhhcC
Confidence             2344589999999976         799999999999999999997754432110    01111000000         


Q ss_pred             --cccccCC---C----CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          327 --LCLDFEE---D----GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       327 --~~~~~~~---~----~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                        .......   .    ....++.++.+++.+||+.||++|||++|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~  280 (299)
T 2r3i_A          235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA  280 (299)
T ss_dssp             TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHH
Confidence              0000000   0    01134578999999999999999999753


No 199
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=1.2e-38  Score=287.62  Aligned_cols=244  Identities=19%  Similarity=0.282  Sum_probs=166.6

Q ss_pred             ccccccccCCcceeec--cCCeeEEEEcccC--CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          110 QSLISFNLTNSKFFFL--HSNEIAVKMLEHL--KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~--~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ..++.+++|.++.+..  .++.||||++...  ....+++.+|+.++++++|+||+++++++...+..++||||+++++|
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  100 (303)
T 2vwi_A           21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV  100 (303)
T ss_dssp             EECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBH
T ss_pred             heeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCch
Confidence            3455566665555544  3455999998643  23456788999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCC--CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          186 QKFIFSKTN--SSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       186 ~~~l~~~~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      .+++.....  ......+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++.........
T Consensus       101 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  177 (303)
T 2vwi_A          101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI  177 (303)
T ss_dssp             HHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-----
T ss_pred             HHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCc
Confidence            999864211  1123569999999999999999999999   99999999999999999999999999998766543211


Q ss_pred             ---cccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcccccc--
Q 039471          264 ---VSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCL--  329 (363)
Q Consensus       264 ---~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  329 (363)
                         .......||..|+|||++         +|+||||+++|||++|+.||........       .............  
T Consensus       178 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------~~~~~~~~~~~~~~~  250 (303)
T 2vwi_A          178 TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-------LMLTLQNDPPSLETG  250 (303)
T ss_dssp             ----------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-------HHHHHTSSCCCTTC-
T ss_pred             cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-------HHHHhccCCCccccc
Confidence               112345689999999986         7999999999999999999976543221       1111110000000  


Q ss_pred             ccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          330 DFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       330 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..........+..+.+++.+||+.||++|||++|
T Consensus       251 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  284 (303)
T 2vwi_A          251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAE  284 (303)
T ss_dssp             ----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             cccchhhhhhhHHHHHHHHHHccCChhhCcCHHH
Confidence            0011122334567999999999999999999753


No 200
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=6e-39  Score=297.00  Aligned_cols=235  Identities=22%  Similarity=0.280  Sum_probs=177.7

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ..++.+++|.++.+...  +..||+|++....  ...+.+.+|+.++++++|+||+++++++.+++..++||||+++++|
T Consensus        39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  118 (360)
T 3eqc_A           39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL  118 (360)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred             eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCH
Confidence            34455566655555444  4449999987542  2236789999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQ-RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      .+++...      ..+++..+..++.|++.||.|||+   . +|+||||||+|||++.++.+||+|||++.......   
T Consensus       119 ~~~l~~~------~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---  186 (360)
T 3eqc_A          119 DQVLKKA------GRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---  186 (360)
T ss_dssp             HHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred             HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc---
Confidence            9999543      458999999999999999999998   6 89999999999999999999999999987654322   


Q ss_pred             ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccch-----------------------
Q 039471          265 SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYF-----------------------  313 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~-----------------------  313 (363)
                       .....||..|+|||++        +|+||||+++|||++|+.||...........+                       
T Consensus       187 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (360)
T 3eqc_A          187 -ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN  265 (360)
T ss_dssp             -----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------------
T ss_pred             -ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccc
Confidence             1345689999999987        79999999999999999999764332110000                       


Q ss_pred             ------------HHHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          314 ------------PEWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       314 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                                  .+ ..+.+....     ........++..+.+++.+||++||++|||++|
T Consensus       266 ~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  321 (360)
T 3eqc_A          266 KFGMDSRPPMAIFE-LLDYIVNEP-----PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQ  321 (360)
T ss_dssp             --------CCCHHH-HHHHHHHSC-----CCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHH
T ss_pred             ccccCCCCcccchh-hhhHHhccC-----CCCCCcccccHHHHHHHHHHhhcChhhCCCHHH
Confidence                        00 000000000     001112234667999999999999999999864


No 201
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=7.8e-38  Score=281.30  Aligned_cols=237  Identities=17%  Similarity=0.199  Sum_probs=176.7

Q ss_pred             ccccccccCCcceee--ccCCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeee-eeCCceeEEEeccCCCCHH
Q 039471          110 QSLISFNLTNSKFFF--LHSNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFC-SEGNRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~--~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~~~~sL~  186 (363)
                      ..++.+++|.++.+.  ..++.||||+..... ..+++.+|+.++++++|++++..++.+ ..+...++||||+ +++|.
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~   92 (296)
T 4hgt_A           15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLE   92 (296)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred             eeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHH
Confidence            445566666665554  334459999876433 335688999999999988777666655 6677889999999 89999


Q ss_pred             HHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEE---cCCCCeeEeccccceeccCCccc
Q 039471          187 KFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL---DHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       187 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill---~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +++....     ..+++..+..++.|++.||+|||+   .+|+||||||+|||+   +.++.+||+|||+++........
T Consensus        93 ~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~  164 (296)
T 4hgt_A           93 DLFNFCS-----RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  164 (296)
T ss_dssp             HHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence            9995432     469999999999999999999999   999999999999999   78899999999999887654321


Q ss_pred             -----cccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccc
Q 039471          264 -----VSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLD  330 (363)
Q Consensus       264 -----~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (363)
                           .......||..|+|||++        +||||||+++|||++|+.||...........+............     
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----  239 (296)
T 4hgt_A          165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----  239 (296)
T ss_dssp             CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-----
T ss_pred             ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh-----
Confidence                 112345689999999987        79999999999999999999865443322222221111111000     


Q ss_pred             cCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          331 FEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       331 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                        ......+++.+.+++.+||+.||++|||++|
T Consensus       240 --~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~  270 (296)
T 4hgt_A          240 --EVLCKGYPSEFATYLNFCRSLRFDDKPDYSY  270 (296)
T ss_dssp             --HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHH
T ss_pred             --hhhhccCCHHHHHHHHHHHhcCCCCCCCHHH
Confidence              0011223578999999999999999999753


No 202
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=4.4e-38  Score=287.25  Aligned_cols=240  Identities=23%  Similarity=0.380  Sum_probs=178.5

Q ss_pred             ccccccccCCcceeec------cCCeeEEEEcccCC-cChhHHHHHHHHHhccCCCceeeeeeeeeeCC--ceeEEEecc
Q 039471          110 QSLISFNLTNSKFFFL------HSNEIAVKMLEHLK-GNGQEFINEVATIGRIHHFHIVRLLGFCSEGN--RRTLIYEFM  180 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~------~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~  180 (363)
                      ..++.+++|.++.+..      .+..||||++.... ...+.+.+|+.++++++|+||+++++++....  ..++||||+
T Consensus        47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~  126 (326)
T 2w1i_A           47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL  126 (326)
T ss_dssp             EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCC
T ss_pred             eeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECC
Confidence            3345555555554432      23349999987543 23467899999999999999999999986543  789999999


Q ss_pred             CCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCC
Q 039471          181 PNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD  260 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~  260 (363)
                      ++++|.+++....     ..+++..+..++.|++.||+|||+   .+|+|+||||+||+++.++.+||+|||++......
T Consensus       127 ~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~  198 (326)
T 2w1i_A          127 PYGSLRDYLQKHK-----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD  198 (326)
T ss_dssp             TTCBHHHHHHHST-----TSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred             CCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence            9999999996432     458999999999999999999999   99999999999999999999999999999887654


Q ss_pred             cccc-ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhccc-------c-cchHHHHHHHhhh
Q 039471          261 ISIV-SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQS-------Q-IYFPEWIYNRMRL  323 (363)
Q Consensus       261 ~~~~-~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~-------~-~~~~~~~~~~~~~  323 (363)
                      .... ......++..|+|||++        +|+||||+++|||++|..|+........       . ......+...+..
T Consensus       199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (326)
T 2w1i_A          199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN  278 (326)
T ss_dssp             CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred             ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhc
Confidence            3321 12334577889999987        8999999999999999988764321100       0 0000111111111


Q ss_pred             ccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          324 GQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      +.      ....+..++..+.+++.+||+.||++|||++|
T Consensus       279 ~~------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e  312 (326)
T 2w1i_A          279 NG------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD  312 (326)
T ss_dssp             TC------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CC------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHH
Confidence            11      11223445678999999999999999999854


No 203
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=6e-38  Score=293.68  Aligned_cols=241  Identities=21%  Similarity=0.252  Sum_probs=177.5

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhccC--------CCceeeeeeeee----eCCceeE
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRIH--------HFHIVRLLGFCS----EGNRRTL  175 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~----~~~~~~l  175 (363)
                      ..++.+++|.++.+...  ++.||||++.......+.+.+|+.++++++        |+||+++++++.    .+...++
T Consensus        43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~l  122 (397)
T 1wak_A           43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICM  122 (397)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEE
T ss_pred             EEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEE
Confidence            33455555555555332  344999999865555678899999999985        788999999987    5568999


Q ss_pred             EEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CceecCCCCCceEEcCCC----------
Q 039471          176 IYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQ-RILHFDIKPHNILLDHNF----------  244 (363)
Q Consensus       176 v~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~i~H~dikp~Nill~~~~----------  244 (363)
                      ||||+ +++|.+++....    ...+++..++.++.||+.||+|||+   . +|+||||||+|||++.++          
T Consensus       123 v~e~~-~~~l~~~~~~~~----~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~~~~~~~~~~  194 (397)
T 1wak_A          123 VFEVL-GHHLLKWIIKSN----YQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQYIRRLAAEA  194 (397)
T ss_dssp             EECCC-CCBHHHHHHHTT----TSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred             EEecc-CccHHHHHHhcc----cCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccchhhhhhhhhh
Confidence            99999 567777765432    2569999999999999999999999   8 999999999999999775          


Q ss_pred             ---------------------------------------CeeEeccccceeccCCccccccccccccccccCCccc----
Q 039471          245 ---------------------------------------QPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPELF----  281 (363)
Q Consensus       245 ---------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----  281 (363)
                                                             .+||+|||++.......     ....||..|+|||++    
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~  269 (397)
T 1wak_A          195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF-----TEDIQTRQYRSLEVLIGSG  269 (397)
T ss_dssp             C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS-----CSCCSCGGGCCHHHHHTSC
T ss_pred             HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC-----ccCCCCCcccCChhhcCCC
Confidence                                                   79999999998765432     344689999999988    


Q ss_pred             ----cCceehhHHHHHHhcCCCCCCcchhccccc--chHHHHHHHhh--------hcccc----c---------------
Q 039471          282 ----SRNFCYGMMLLEMVGCRKNNDPAVEIQSQI--YFPEWIYNRMR--------LGQEL----C---------------  328 (363)
Q Consensus       282 ----~Di~slG~il~el~~g~~~~~~~~~~~~~~--~~~~~~~~~~~--------~~~~~----~---------------  328 (363)
                          +|||||||++|||++|+.||..........  .....+.....        .+...    .               
T Consensus       270 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (397)
T 1wak_A          270 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG  349 (397)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCC
T ss_pred             CCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcc
Confidence                899999999999999999997644321100  00000000000        00000    0               


Q ss_pred             ----cccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          329 ----LDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       329 ----~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                          ...........+..+.+++.+||+.||++|||++|
T Consensus       350 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  388 (397)
T 1wak_A          350 LFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE  388 (397)
T ss_dssp             HHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHH
T ss_pred             hhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHH
Confidence                00011235677889999999999999999999864


No 204
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=3.6e-38  Score=285.73  Aligned_cols=234  Identities=18%  Similarity=0.288  Sum_probs=168.6

Q ss_pred             ccccccCCcceeec--cCCeeEEEEcccCC----cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          112 LISFNLTNSKFFFL--HSNEIAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       112 ~~~~~~~~~~~~~~--~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ++.+++|.++.+..  .+..||||++....    ...+++.+|+.++++++|+||+++++++.+++..++||||+++++|
T Consensus        40 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  119 (310)
T 2wqm_A           40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL  119 (310)
T ss_dssp             EECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBH
T ss_pred             ecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCH
Confidence            45555665555443  35559999987432    2235788999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      .+++.....  ....+++..++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++.........  
T Consensus       120 ~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--  192 (310)
T 2wqm_A          120 SRMIKHFKK--QKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--  192 (310)
T ss_dssp             HHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC--------------
T ss_pred             HHHHHHhcc--cccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCcc--
Confidence            999864321  23568999999999999999999999   99999999999999999999999999999876543221  


Q ss_pred             cccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcH
Q 039471          266 RTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDE  337 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (363)
                      .....|+..|+|||++        +|+||||+++|||++|+.||........     . ....+.....     ......
T Consensus       193 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-----~-~~~~~~~~~~-----~~~~~~  261 (310)
T 2wqm_A          193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-----S-LCKKIEQCDY-----PPLPSD  261 (310)
T ss_dssp             ------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHH-----H-HHHHHHTTCS-----CCCCTT
T ss_pred             ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHH-----H-HHHHhhcccC-----CCCccc
Confidence            1334589999999987        7999999999999999999875432111     1 1122221111     111123


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          338 GIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       338 ~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+..+.+++.+||+.||++|||++|
T Consensus       262 ~~~~~l~~li~~~l~~dp~~Rps~~~  287 (310)
T 2wqm_A          262 HYSEELRQLVNMCINPDPEKRPDVTY  287 (310)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ccCHHHHHHHHHHcCCChhhCCCHHH
Confidence            45678999999999999999999853


No 205
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=5.8e-38  Score=290.22  Aligned_cols=245  Identities=18%  Similarity=0.168  Sum_probs=172.4

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCCc-------eeEEEecc
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNR-------RTLIYEFM  180 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-------~~lv~e~~  180 (363)
                      ..++.+++|.++.+...  +..||||++.........+.+|+..++.++|+||+++++++.....       .++||||+
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~  108 (360)
T 3e3p_A           29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV  108 (360)
T ss_dssp             ----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECC
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecc
Confidence            44566666666655543  4459999997766666788899999999999999999999865433       78999999


Q ss_pred             CCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhh--cCCCCCceecCCCCCceEEcC-CCCeeEeccccceec
Q 039471          181 PNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLH--QGCNQRILHFDIKPHNILLDH-NFQPKISDFGLAKLC  257 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~~~~i~H~dikp~Nill~~-~~~~kl~Dfg~a~~~  257 (363)
                      ++ +|...+....  .....+++..+..++.|++.||.|||  +   .+|+||||||+|||++. ++.+||+|||+++..
T Consensus       109 ~~-~l~~~~~~~~--~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~  182 (360)
T 3e3p_A          109 PD-TLHRCCRNYY--RRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL  182 (360)
T ss_dssp             SC-BHHHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEEEECCCTTCBCC
T ss_pred             cc-cHHHHHHHHh--hcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcEEEeeCCCceec
Confidence            86 6655543321  23367899999999999999999999  8   99999999999999996 899999999999877


Q ss_pred             cCCccccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHH-------HHHHHh
Q 039471          258 SKDISIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPE-------WIYNRM  321 (363)
Q Consensus       258 ~~~~~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~-------~~~~~~  321 (363)
                      ......   ....||..|+|||++         +||||||+++|||++|+.||..............       .....+
T Consensus       183 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (360)
T 3e3p_A          183 SPSEPN---VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL  259 (360)
T ss_dssp             CTTSCC---CSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred             CCCCCc---ccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhc
Confidence            654332   345689999999986         7999999999999999999987543322111000       000000


Q ss_pred             hhc-ccccc---------ccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          322 RLG-QELCL---------DFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       322 ~~~-~~~~~---------~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ... .....         ..........+..+.+++.+||+.||++|||++|
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  311 (360)
T 3e3p_A          260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYE  311 (360)
T ss_dssp             CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHH
Confidence            000 00000         0001111225678999999999999999999754


No 206
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=1.5e-37  Score=279.54  Aligned_cols=236  Identities=17%  Similarity=0.199  Sum_probs=176.5

Q ss_pred             cccccccCCcceee--ccCCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeee-eeCCceeEEEeccCCCCHHH
Q 039471          111 SLISFNLTNSKFFF--LHSNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFC-SEGNRRTLIYEFMPNGSLQK  187 (363)
Q Consensus       111 ~~~~~~~~~~~~~~--~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~~~~sL~~  187 (363)
                      .++.+++|.++.+.  ..++.||||++.... ..+++.+|+.++++++|++++..++.+ .++...++||||+ +++|.+
T Consensus        16 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~   93 (296)
T 3uzp_A           16 KIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLED   93 (296)
T ss_dssp             EEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHH
T ss_pred             EEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHH
Confidence            34555555555554  234459999987543 346789999999999988766666655 6677889999999 899999


Q ss_pred             HhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEE---cCCCCeeEeccccceeccCCcccc
Q 039471          188 FIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL---DHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       188 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill---~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      ++....     ..+++..+..++.|++.||+|||+   .+|+||||||+|||+   +.++.+||+|||++..........
T Consensus        94 ~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~  165 (296)
T 3uzp_A           94 LFNFCS-----RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ  165 (296)
T ss_dssp             HHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred             HHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccc
Confidence            995332     469999999999999999999999   999999999999999   488899999999998876543211


Q ss_pred             -----ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcccccccc
Q 039471          265 -----SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDF  331 (363)
Q Consensus       265 -----~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (363)
                           ......||..|+|||++        +||||||+++|||++|+.||...........+............      
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------  239 (296)
T 3uzp_A          166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI------  239 (296)
T ss_dssp             BCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH------
T ss_pred             ccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch------
Confidence                 12345689999999987        79999999999999999999865433222222111111111000      


Q ss_pred             CCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          332 EEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       332 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       ......+++.+.+++.+||+.||++|||++|
T Consensus       240 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  270 (296)
T 3uzp_A          240 -EVLCKGYPSEFATYLNFCRSLRFDDKPDYSY  270 (296)
T ss_dssp             -HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHH
T ss_pred             -HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHH
Confidence             0011234577999999999999999999753


No 207
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=9.7e-39  Score=296.83  Aligned_cols=234  Identities=9%  Similarity=-0.020  Sum_probs=158.1

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCc----ChhHHHHHHHHHhcc--CCCceeeee-------eeeeeC----
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKG----NGQEFINEVATIGRI--HHFHIVRLL-------GFCSEG----  170 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~----~~~~~~~E~~~l~~l--~h~niv~~~-------~~~~~~----  170 (363)
                      ..++.+++|.++.+...  ++.||||++.....    ..+.+.+|+.+++.+  +||||++++       +++...    
T Consensus        68 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~  147 (371)
T 3q60_A           68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPP  147 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCS
T ss_pred             eeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCC
Confidence            34556666665555433  34499999986442    234667785444444  699988755       444332    


Q ss_pred             -------------CceeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHH------HHHHHHHHHHHHHhhcCCCCCceec
Q 039471          171 -------------NRRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKL------RKIAFGVARGVEYLHQGCNQRILHF  231 (363)
Q Consensus       171 -------------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~~~i~H~  231 (363)
                                   ...++||||++ ++|.+++....     ..+++..+      ..++.||+.||+|||+   .+|+||
T Consensus       148 ~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ivHr  218 (371)
T 3q60_A          148 FAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-----FVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVHG  218 (371)
T ss_dssp             SSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-----HSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEEET
T ss_pred             eeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-----cccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCccC
Confidence                         33799999998 89999996542     23445555      6778999999999999   999999


Q ss_pred             CCCCCceEEcCCCCeeEeccccceeccCCccccccccccccccccCCccc----------cCceehhHHHHHHhcCCCCC
Q 039471          232 DIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPELF----------SRNFCYGMMLLEMVGCRKNN  301 (363)
Q Consensus       232 dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~Di~slG~il~el~~g~~~~  301 (363)
                      ||||+|||++.++.+||+|||+++......     ....+|+.|+|||++          +||||||+++|||++|+.||
T Consensus       219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf  293 (371)
T 3q60_A          219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF  293 (371)
T ss_dssp             TCSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred             cCCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999998765322     134467999999987          79999999999999999999


Q ss_pred             CcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          302 DPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...........      ....................+++.+.+++.+||+.||++|||++|
T Consensus       294 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  349 (371)
T 3q60_A          294 GLVTPGIKGSW------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLE  349 (371)
T ss_dssp             TBCCTTCTTCC------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHH
T ss_pred             CCcCcccccch------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence            87643321100      000000000111111222355778999999999999999999853


No 208
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=1.9e-38  Score=284.51  Aligned_cols=233  Identities=20%  Similarity=0.251  Sum_probs=164.3

Q ss_pred             ccccccccCCcceeec--cCCeeEEEEcccCCcCh---hHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          110 QSLISFNLTNSKFFFL--HSNEIAVKMLEHLKGNG---QEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ..++.+++|.++.+..  .++.||||++.......   +.+.++...++.++|+||+++++++.+++..++||||++ ++
T Consensus        13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~   91 (290)
T 3fme_A           13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TS   91 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-EE
T ss_pred             HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-cc
Confidence            3455555655555443  34449999997543222   233445555788899999999999999999999999997 59


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQ-RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      |.+++....  .....+++..++.++.|++.||+|||+   . +++||||||+||+++.++.+||+|||+++........
T Consensus        92 l~~~l~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  166 (290)
T 3fme_A           92 LDKFYKQVI--DKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK  166 (290)
T ss_dssp             HHHHHHHHH--HTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC------------
T ss_pred             hHHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccccccccc
Confidence            988875432  123679999999999999999999999   7 9999999999999999999999999999876554332


Q ss_pred             cccccccccccccCCccc------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcccccccc
Q 039471          264 VSRTAARGTSGYIAPELF------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDF  331 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (363)
                         ....||..|+|||++            +|+||||+++|||++|+.||........      .+....... .     
T Consensus       167 ---~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~~-~-----  231 (290)
T 3fme_A          167 ---DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ------QLKQVVEEP-S-----  231 (290)
T ss_dssp             ------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH------HHHHHHHSC-C-----
T ss_pred             ---cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH------HHHHHhccC-C-----
Confidence               334689999999994            7999999999999999999975322111      111111111 1     


Q ss_pred             CCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          332 EEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       332 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ........++.+.+++.+||+.||++|||++|
T Consensus       232 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e  263 (290)
T 3fme_A          232 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPE  263 (290)
T ss_dssp             CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCcccccCCHHHHHHHHHHhhcChhhCcCHHH
Confidence            11112345677999999999999999999864


No 209
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=2.2e-38  Score=287.93  Aligned_cols=237  Identities=22%  Similarity=0.283  Sum_probs=177.0

Q ss_pred             ccccccccCCcceeec--cCCeeEEEEcccCC-cChhHHHHHHHHHhccCCCceeeeeeeee----eCCceeEEEeccCC
Q 039471          110 QSLISFNLTNSKFFFL--HSNEIAVKMLEHLK-GNGQEFINEVATIGRIHHFHIVRLLGFCS----EGNRRTLIYEFMPN  182 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~~lv~e~~~~  182 (363)
                      ..++.+++|.++.+..  .++.||||++.... ...+.+.+|+.++++++|+||+++++++.    .....++||||+++
T Consensus        35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~  114 (317)
T 2buj_A           35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKR  114 (317)
T ss_dssp             EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTT
T ss_pred             EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCC
Confidence            3345556665555442  34559999886432 34467899999999999999999999986    33478999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      ++|.+++.....  ....+++..++.++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||++........
T Consensus       115 ~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~  189 (317)
T 2buj_A          115 GTLWNEIERLKD--KGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE  189 (317)
T ss_dssp             CBHHHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEE
T ss_pred             CcHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccc
Confidence            999999965421  23679999999999999999999999   9999999999999999999999999999876542211


Q ss_pred             c-------cccccccccccccCCccc-----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhc
Q 039471          263 I-------VSRTAARGTSGYIAPELF-----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLG  324 (363)
Q Consensus       263 ~-------~~~~~~~gt~~y~aPE~~-----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (363)
                      .       .......||..|+|||++           +|+||||+++|||++|+.||..........      ...... 
T Consensus       190 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~------~~~~~~-  262 (317)
T 2buj_A          190 GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSV------ALAVQN-  262 (317)
T ss_dssp             SHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCH------HHHHHC-
T ss_pred             cccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchh------hHHhhc-
Confidence            0       001234579999999976           699999999999999999986543322211      111111 


Q ss_pred             cccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          325 QELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       .    .........+..+.+++.+||+.||++|||++|
T Consensus       263 -~----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  296 (317)
T 2buj_A          263 -Q----LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPL  296 (317)
T ss_dssp             -C------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             -c----CCCCccccCCHHHHHHHHHHhhcChhhCCCHHH
Confidence             0    111122345678999999999999999999853


No 210
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=5.8e-38  Score=282.90  Aligned_cols=232  Identities=24%  Similarity=0.347  Sum_probs=170.8

Q ss_pred             cccccccCCcceeec--cCCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeee-------------CCceeE
Q 039471          111 SLISFNLTNSKFFFL--HSNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSE-------------GNRRTL  175 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------------~~~~~l  175 (363)
                      .++.+++|.++.+..  .+..||||++.......+.+.+|+.++++++|+||+++++++.+             ....++
T Consensus        13 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l   92 (303)
T 1zy4_A           13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFI   92 (303)
T ss_dssp             EEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEE
T ss_pred             eeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEE
Confidence            345555655555543  34459999997655556788999999999999999999998854             357899


Q ss_pred             EEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccce
Q 039471          176 IYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK  255 (363)
Q Consensus       176 v~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~  255 (363)
                      ||||+++++|.+++....     ..+++..++.++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++.
T Consensus        93 v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~  164 (303)
T 1zy4_A           93 QMEYCENGTLYDLIHSEN-----LNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAK  164 (303)
T ss_dssp             EEECCCSCBHHHHHHHSC-----GGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCCCS
T ss_pred             EEecCCCCCHHHhhhccc-----cccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEeeCcchh
Confidence            999999999999996432     468899999999999999999999   999999999999999999999999999998


Q ss_pred             eccCCcc------------ccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchH
Q 039471          256 LCSKDIS------------IVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFP  314 (363)
Q Consensus       256 ~~~~~~~------------~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~  314 (363)
                      .......            ........||..|+|||++         +|+||||+++|||++   |+........     
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~-----  236 (303)
T 1zy4_A          165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN-----  236 (303)
T ss_dssp             CTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH-----
T ss_pred             hcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH-----
Confidence            7643211            0112345689999999986         799999999999998   4433221111     


Q ss_pred             HHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          315 EWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                        ....+...   ............+..+.+++.+||+.||++|||++|
T Consensus       237 --~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  280 (303)
T 1zy4_A          237 --ILKKLRSV---SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGART  280 (303)
T ss_dssp             --HHHHHHST---TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             --HHHhcccc---ccccCccccccchHHHHHHHHHHHhcCcccCcCHHH
Confidence              11222211   111222334455677899999999999999999753


No 211
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.3e-38  Score=295.54  Aligned_cols=242  Identities=19%  Similarity=0.213  Sum_probs=173.0

Q ss_pred             ccccccccCCcceeec--cCCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeee------------------
Q 039471          110 QSLISFNLTNSKFFFL--HSNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSE------------------  169 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------------------  169 (363)
                      ..++.+++|.++.+..  .++.||||++......   ..+|+.+++.++|+||+++++++..                  
T Consensus        13 ~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~---~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~   89 (383)
T 3eb0_A           13 KTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY---KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKL   89 (383)
T ss_dssp             EEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS---CCHHHHHHTTCCCTTBCCEEEEEEEC-----------------
T ss_pred             EEEEeccCEEEEEEEECCCCCEEEEEEEecCcch---HHHHHHHHHHcCCCCccchhheeeecCcccccccccccccccc
Confidence            3345555555554433  2445999998754332   2379999999999999999999843                  


Q ss_pred             --------------------CCceeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCce
Q 039471          170 --------------------GNRRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRIL  229 (363)
Q Consensus       170 --------------------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~  229 (363)
                                          +...++||||++ ++|.+.+....  .....+++..++.++.||+.||+|||+   .+|+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~---~gi~  163 (383)
T 3eb0_A           90 GGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFI--RSGRSIPMNLISIYIYQLFRAVGFIHS---LGIC  163 (383)
T ss_dssp             --------------------CCEEEEEECCCS-EEHHHHHHHHH--HTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEE
T ss_pred             cccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHH---CcCc
Confidence                                334889999998 58888775432  123679999999999999999999999   9999


Q ss_pred             ecCCCCCceEEc-CCCCeeEeccccceeccCCccccccccccccccccCCccc---------cCceehhHHHHHHhcCCC
Q 039471          230 HFDIKPHNILLD-HNFQPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRK  299 (363)
Q Consensus       230 H~dikp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~  299 (363)
                      ||||||+|||++ .++.+||+|||+++........   ....+|..|+|||++         +|+||+||++|||++|+.
T Consensus       164 H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  240 (383)
T 3eb0_A          164 HRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS---VAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP  240 (383)
T ss_dssp             CSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC---CCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             cCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC---cCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence            999999999998 6889999999999977554432   345689999999976         799999999999999999


Q ss_pred             CCCcchhcccccchHH--------HHHHHhhhcccccc-c-----cCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          300 NNDPAVEIQSQIYFPE--------WIYNRMRLGQELCL-D-----FEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       300 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ||...........+..        .+............ .     .....+...+..+.+++.+||+.||++|||++|
T Consensus       241 pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  318 (383)
T 3eb0_A          241 LFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYE  318 (383)
T ss_dssp             SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence            9987544332111100        00000000000000 0     000122235667999999999999999999754


No 212
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=1.2e-37  Score=285.25  Aligned_cols=239  Identities=18%  Similarity=0.255  Sum_probs=178.3

Q ss_pred             ccccccCCcceeec---cCCeeEEEEcccCCcChhHHHHHHHHHhccCCCc------eeeeeeeeeeCCceeEEEeccCC
Q 039471          112 LISFNLTNSKFFFL---HSNEIAVKMLEHLKGNGQEFINEVATIGRIHHFH------IVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       112 ~~~~~~~~~~~~~~---~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      ++.+++|.++.+..   .+..||||+++......+.+.+|+.++++++|++      ++++++++...+..++||||+ +
T Consensus        22 lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~  100 (339)
T 1z57_A           22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-G  100 (339)
T ss_dssp             EEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-C
T ss_pred             EecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-C
Confidence            45555555554432   2344999999865555678889999999987664      999999999999999999999 7


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcC-------------------C
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDH-------------------N  243 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~-------------------~  243 (363)
                      ++|.+++.....    ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.                   +
T Consensus       101 ~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~  173 (339)
T 1z57_A          101 LSTYDFIKENGF----LPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN  173 (339)
T ss_dssp             CBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----CEEEEESC
T ss_pred             CCHHHHHHhcCC----CCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCccccccccccC
Confidence            899999965432    468999999999999999999999   99999999999999987                   6


Q ss_pred             CCeeEeccccceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccc---
Q 039471          244 FQPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIY---  312 (363)
Q Consensus       244 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~---  312 (363)
                      +.+||+|||+++......     ....||..|+|||++        +|+||||+++|||++|+.||...........   
T Consensus       174 ~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  248 (339)
T 1z57_A          174 PDIKVVDFGSATYDDEHH-----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER  248 (339)
T ss_dssp             CCEEECCCSSCEETTSCC-----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHH
T ss_pred             CCceEeeCcccccCcccc-----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            689999999998754432     345689999999987        8999999999999999999976543221100   


Q ss_pred             ----hHHHHHHHhhhccc----------------------cccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          313 ----FPEWIYNRMRLGQE----------------------LCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       313 ----~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                          .+............                      .............++.+.+++.+||+.||++|||++|
T Consensus       249 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  325 (339)
T 1z57_A          249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLRE  325 (339)
T ss_dssp             HHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHH
Confidence                01111010000000                      0000011123456788999999999999999999864


No 213
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=6.3e-38  Score=290.63  Aligned_cols=241  Identities=20%  Similarity=0.255  Sum_probs=174.0

Q ss_pred             ccccccCCcceeecc--CCeeEEEEcccCCc--ChhHHHHHHHHHhccCCCceeeeeeeeeeC-----CceeEEEeccCC
Q 039471          112 LISFNLTNSKFFFLH--SNEIAVKMLEHLKG--NGQEFINEVATIGRIHHFHIVRLLGFCSEG-----NRRTLIYEFMPN  182 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~  182 (363)
                      ++.+++|.++.+...  +..||||++.....  ..+.+.+|++++++++|+||+++++++...     ...++||||++ 
T Consensus        35 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-  113 (364)
T 3qyz_A           35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME-  113 (364)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-
T ss_pred             eecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccC-
Confidence            444555544444322  33499999974332  236788999999999999999999998654     46899999997 


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      ++|.+++..       ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus       114 ~~L~~~l~~-------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  183 (364)
T 3qyz_A          114 TDLYKLLKT-------QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD  183 (364)
T ss_dssp             EEHHHHHHH-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred             cCHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCC
Confidence            599999843       458999999999999999999999   9999999999999999999999999999987764432


Q ss_pred             cc-ccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHH-------HHHhhh--
Q 039471          263 IV-SRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWI-------YNRMRL--  323 (363)
Q Consensus       263 ~~-~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~--  323 (363)
                      .. ......||+.|+|||++         +|+||||+++|||++|+.||................       ......  
T Consensus       184 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  263 (364)
T 3qyz_A          184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK  263 (364)
T ss_dssp             BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHH
T ss_pred             ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence            21 12345689999999976         699999999999999999997654332211000000       000000  


Q ss_pred             cccc--ccccCCC-----CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          324 GQEL--CLDFEED-----GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       324 ~~~~--~~~~~~~-----~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ....  .......     .....+.++.+++.+||++||++|||++|
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  310 (364)
T 3qyz_A          264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ  310 (364)
T ss_dssp             HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence            0000  0000000     11234567999999999999999999754


No 214
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=1.2e-37  Score=295.17  Aligned_cols=236  Identities=22%  Similarity=0.219  Sum_probs=168.1

Q ss_pred             ccccccCCccee-eccCCeeEEEEcccCCcChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCCCCHHHHh
Q 039471          112 LISFNLTNSKFF-FLHSNEIAVKMLEHLKGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKFI  189 (363)
Q Consensus       112 ~~~~~~~~~~~~-~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l  189 (363)
                      ++.+++|.+.+. ...++.||||++...  ..+.+.+|+.+++++ +||||+++++++.++...++||||+. |+|.+++
T Consensus        23 LG~G~~g~V~~~~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l   99 (434)
T 2rio_A           23 LGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLV   99 (434)
T ss_dssp             EEECSTTCEEEEEESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHH
T ss_pred             EeeCCCeEEEEEEEECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHH
Confidence            566666665332 234556999998643  345678999999876 89999999999999999999999996 6999999


Q ss_pred             hhcCCCCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCC-------------CCeeEeccccce
Q 039471          190 FSKTNSSSH-RQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHN-------------FQPKISDFGLAK  255 (363)
Q Consensus       190 ~~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~-------------~~~kl~Dfg~a~  255 (363)
                      ......... ...++..++.++.||+.||+|||+   .+|+||||||+|||++.+             +.+||+|||+++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~  176 (434)
T 2rio_A          100 ESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK  176 (434)
T ss_dssp             HTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCE
T ss_pred             hccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEcccccce
Confidence            654321111 112344567899999999999999   999999999999999754             479999999999


Q ss_pred             eccCCcccc--ccccccccccccCCccc---------------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHH
Q 039471          256 LCSKDISIV--SRTAARGTSGYIAPELF---------------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWI  317 (363)
Q Consensus       256 ~~~~~~~~~--~~~~~~gt~~y~aPE~~---------------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~  317 (363)
                      .........  ......||+.|+|||++               +|||||||++|||++ |+.||........        
T Consensus       177 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--------  248 (434)
T 2rio_A          177 KLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--------  248 (434)
T ss_dssp             ECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH--------
T ss_pred             ecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH--------
Confidence            876543211  12345699999999976               799999999999998 8999865432211        


Q ss_pred             HHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          318 YNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                        .+..+..............++.++.+++.+||+.||++|||++|
T Consensus       249 --~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e  292 (434)
T 2rio_A          249 --NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK  292 (434)
T ss_dssp             --HHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             --HHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHH
Confidence              11111111111222345678899999999999999999999853


No 215
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=1.2e-37  Score=289.47  Aligned_cols=239  Identities=20%  Similarity=0.229  Sum_probs=166.1

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCc---ChhHHHHHHHHHhccCCCceeeeeeeeeeCC------ceeEEEe
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKG---NGQEFINEVATIGRIHHFHIVRLLGFCSEGN------RRTLIYE  178 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e  178 (363)
                      ..++.+++|.+..+...  ++.||||++.....   ..+.+.+|+.+++.++|+||+++++++....      ..++|||
T Consensus        31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e  110 (371)
T 2xrw_A           31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME  110 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEE
T ss_pred             eeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEE
Confidence            33455555555444332  44599999975332   2357889999999999999999999987654      7899999


Q ss_pred             ccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceecc
Q 039471          179 FMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS  258 (363)
Q Consensus       179 ~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~  258 (363)
                      |+++ +|.+++.        ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       111 ~~~~-~l~~~~~--------~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  178 (371)
T 2xrw_A          111 LMDA-NLCQVIQ--------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  178 (371)
T ss_dssp             CCSE-EHHHHHH--------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred             cCCC-CHHHHHh--------hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence            9974 8888883        358999999999999999999999   999999999999999999999999999998765


Q ss_pred             CCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhccccc--------chHHHH-----
Q 039471          259 KDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQI--------YFPEWI-----  317 (363)
Q Consensus       259 ~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~--------~~~~~~-----  317 (363)
                      ....   .....||..|+|||++        +|+||||+++|||++|+.||..........        ..+++.     
T Consensus       179 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  255 (371)
T 2xrw_A          179 TSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP  255 (371)
T ss_dssp             --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCH
T ss_pred             cccc---cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence            4322   1345689999999987        899999999999999999997654322100        000000     


Q ss_pred             --HHHhhhccc------------cccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          318 --YNRMRLGQE------------LCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       318 --~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                        .........            .............+..+.+++.+||+.||++|||++|
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e  315 (371)
T 2xrw_A          256 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE  315 (371)
T ss_dssp             HHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHH
Confidence              000000000            0000001112344778999999999999999999864


No 216
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=3e-38  Score=291.46  Aligned_cols=236  Identities=17%  Similarity=0.097  Sum_probs=175.3

Q ss_pred             ccccccCCcceeecc----------CCeeEEEEcccCCcChhHHHHHHHHHhccCCCceee---------------eeee
Q 039471          112 LISFNLTNSKFFFLH----------SNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVR---------------LLGF  166 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~----------~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------------~~~~  166 (363)
                      ++.+++|.++.+...          +..||||++...    +.+.+|++++++++|+||++               ++++
T Consensus        50 lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~  125 (352)
T 2jii_A           50 QTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGF  125 (352)
T ss_dssp             EEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEE
T ss_pred             ecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhc
Confidence            355566665555443          345999998743    57889999999999999988               5667


Q ss_pred             eee-CCceeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCC-
Q 039471          167 CSE-GNRRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-  244 (363)
Q Consensus       167 ~~~-~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~-  244 (363)
                      +.. +...++||||+ +++|.+++....    ...+++..++.++.||+.||+|||+   .+|+||||||+|||++.++ 
T Consensus       126 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl~~~~~~  197 (352)
T 2jii_A          126 GVHQDKYRFLVLPSL-GRSLQSALDVSP----KHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIFVDPEDQ  197 (352)
T ss_dssp             EEETTTEEEEEEECC-CEEHHHHHHHSG----GGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEEEETTEE
T ss_pred             cccCCcEEEEEecCC-CcCHHHHHHhCC----cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEEcCCCC
Confidence            665 67889999999 999999996442    2579999999999999999999999   9999999999999999998 


Q ss_pred             -CeeEeccccceeccCCcccc-----ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccc
Q 039471          245 -QPKISDFGLAKLCSKDISIV-----SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQ  310 (363)
Q Consensus       245 -~~kl~Dfg~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~  310 (363)
                       .+||+|||+++.........     ......||..|+|||++        +|+||||+++|||++|+.||.........
T Consensus       198 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~  277 (352)
T 2jii_A          198 SQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTED  277 (352)
T ss_dssp             EEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHH
T ss_pred             ceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHH
Confidence             89999999998765432211     11334689999999987        89999999999999999999865422211


Q ss_pred             cchHHHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          311 IYFPEWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                        ...... ..... ..............++.+.+++.+||+.||++|||++|
T Consensus       278 --~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  326 (352)
T 2jii_A          278 --IMKQKQ-KFVDK-PGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAM  326 (352)
T ss_dssp             --HHHHHH-HHHHS-CCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHH
T ss_pred             --HHHHHH-hccCC-hhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHH
Confidence              111111 11100 00000011111234678999999999999999999853


No 217
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=6.4e-38  Score=281.27  Aligned_cols=232  Identities=23%  Similarity=0.312  Sum_probs=172.0

Q ss_pred             ccccccccCCcceeecc---CC--eeEEEEcccCC----cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEecc
Q 039471          110 QSLISFNLTNSKFFFLH---SN--EIAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~---~~--~vAvK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      ..++.+++|.++.+...   ++  .||||++....    ...+.+.+|+.++++++|+||+++++++..+. .++|+||+
T Consensus        24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~  102 (291)
T 1u46_A           24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELA  102 (291)
T ss_dssp             EECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECC
T ss_pred             eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecc
Confidence            33456666666555432   12  38999986432    23468899999999999999999999998765 88999999


Q ss_pred             CCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCC
Q 039471          181 PNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD  260 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~  260 (363)
                      ++++|.+++....     ..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++......
T Consensus       103 ~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  174 (291)
T 1u46_A          103 PLGSLLDRLRKHQ-----GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN  174 (291)
T ss_dssp             TTCBHHHHHHHHG-----GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred             cCCCHHHHHHhcc-----CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence            9999999996432     458999999999999999999999   99999999999999999999999999999887654


Q ss_pred             cccc-ccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccc
Q 039471          261 ISIV-SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLD  330 (363)
Q Consensus       261 ~~~~-~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (363)
                      .... ......+|..|+|||++        +|+||||+++|||++ |+.||.......        ....+.....    
T Consensus       175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~----  242 (291)
T 1u46_A          175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--------ILHKIDKEGE----  242 (291)
T ss_dssp             CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTSCC----
T ss_pred             ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH--------HHHHHHccCC----
Confidence            3221 12334577889999988        899999999999999 999987653321        1222221111    


Q ss_pred             cCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          331 FEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       331 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       ....+..++..+.+++.+||+.||++|||++|
T Consensus       243 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~  274 (291)
T 1u46_A          243 -RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVA  274 (291)
T ss_dssp             -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             -CCCCCcCcCHHHHHHHHHHccCCcccCcCHHH
Confidence             11223345678999999999999999999853


No 218
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=2.8e-38  Score=290.15  Aligned_cols=232  Identities=20%  Similarity=0.277  Sum_probs=175.4

Q ss_pred             cccccccCCcceeec--cCCeeEEEEcccCCcC--hhHHHHHHHH-HhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          111 SLISFNLTNSKFFFL--HSNEIAVKMLEHLKGN--GQEFINEVAT-IGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~~--~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      .++.+++|.++.+..  .++.||||++......  ..++..|... ++.++|+||+++++++.+++..++||||+++ +|
T Consensus        58 ~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L  136 (340)
T 3an0_A           58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-SL  136 (340)
T ss_dssp             EEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-EH
T ss_pred             EecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-cH
Confidence            355566665555443  3445999999754322  3455666665 7778999999999999999999999999975 99


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CceecCCCCCceEEcCCCCeeEeccccceeccCCcccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQ-RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV  264 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  264 (363)
                      .+++....  .....+++..++.++.||+.||+|||+   . +|+||||||+|||++.++.+||+|||+++.......  
T Consensus       137 ~~~l~~~~--~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--  209 (340)
T 3an0_A          137 DKFYKQVI--DKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA--  209 (340)
T ss_dssp             HHHHHHHH--HTSCCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHH--
T ss_pred             HHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeCCCceecccccc--
Confidence            99885432  123679999999999999999999998   6 999999999999999999999999999987654322  


Q ss_pred             ccccccccccccCCccc------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccC
Q 039471          265 SRTAARGTSGYIAPELF------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFE  332 (363)
Q Consensus       265 ~~~~~~gt~~y~aPE~~------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (363)
                       .....||..|+|||++            +||||||+++|||++|+.||........      .+..... ...     .
T Consensus       210 -~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~------~~~~~~~-~~~-----~  276 (340)
T 3an0_A          210 -KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ------QLKQVVE-EPS-----P  276 (340)
T ss_dssp             -HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH------HHHHHHH-SCC-----C
T ss_pred             -cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHH------HHHHHhc-CCC-----C
Confidence             1334689999999983            7999999999999999999975322111      1111111 111     1


Q ss_pred             CCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          333 EDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       333 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ......++.++.+++.+||+.||++|||++|
T Consensus       277 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e  307 (340)
T 3an0_A          277 QLPADKFSAEFVDFTSQCLKKNSKERPTYPE  307 (340)
T ss_dssp             CCCGGGSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCcccCCHHHHHHHHHHccCCcccCcCHHH
Confidence            1112345678999999999999999999854


No 219
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.5e-37  Score=292.12  Aligned_cols=190  Identities=20%  Similarity=0.261  Sum_probs=141.1

Q ss_pred             cccccccCCcceeecc----CCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeee--eCCceeEEEeccCCCC
Q 039471          111 SLISFNLTNSKFFFLH----SNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCS--EGNRRTLIYEFMPNGS  184 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~----~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~~~~~s  184 (363)
                      +++.+++|.++.+...    +..||||++.... ..+.+.+|+.++++++|+||+++++++.  .+...++||||++ ++
T Consensus        28 ~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~-~~  105 (405)
T 3rgf_A           28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HD  105 (405)
T ss_dssp             CCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-EE
T ss_pred             EeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-CC
Confidence            3566666666665533    3349999997443 4467889999999999999999999995  4678999999996 58


Q ss_pred             HHHHhhhcCC---CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEE----cCCCCeeEeccccceec
Q 039471          185 LQKFIFSKTN---SSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL----DHNFQPKISDFGLAKLC  257 (363)
Q Consensus       185 L~~~l~~~~~---~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill----~~~~~~kl~Dfg~a~~~  257 (363)
                      |.+++.....   ......+++..++.++.||+.||+|||+   .+|+||||||+|||+    +.++.+||+|||+++..
T Consensus       106 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~  182 (405)
T 3rgf_A          106 LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  182 (405)
T ss_dssp             HHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--
T ss_pred             HHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceec
Confidence            8888753221   1122359999999999999999999999   999999999999999    67889999999999876


Q ss_pred             cCCccc-cccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcch
Q 039471          258 SKDISI-VSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAV  305 (363)
Q Consensus       258 ~~~~~~-~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~  305 (363)
                      ...... .......||..|+|||++         +|||||||++|||++|+.||....
T Consensus       183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  240 (405)
T 3rgf_A          183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  240 (405)
T ss_dssp             --------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred             CCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence            543211 122445689999999987         799999999999999999997543


No 220
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=7.5e-38  Score=280.56  Aligned_cols=230  Identities=23%  Similarity=0.330  Sum_probs=179.5

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccC---CcChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHL---KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      .++.+++|.++.+...  ++.||||++...   ....+.+.+|++++++++|+||+++++++.+.+..++||||+++++|
T Consensus        29 ~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  108 (287)
T 2wei_A           29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL  108 (287)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             EEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCH
Confidence            3455555555554432  445999998643   33557899999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCC---CCeeEeccccceeccCCcc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHN---FQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~---~~~kl~Dfg~a~~~~~~~~  262 (363)
                      .+++...      ..+++..++.++.|++.||+|||+   .+++|+||||+||+++.+   +.+||+|||++........
T Consensus       109 ~~~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~  179 (287)
T 2wei_A          109 FDEIIKR------KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK  179 (287)
T ss_dssp             HHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS
T ss_pred             HHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc
Confidence            9988543      458999999999999999999999   999999999999999754   4699999999987654432


Q ss_pred             ccccccccccccccCCccc-------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCC
Q 039471          263 IVSRTAARGTSGYIAPELF-------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDG  335 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~-------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (363)
                      .   ....++..|+|||++       +|+||||+++|+|++|+.||.......        +...+..+...   .....
T Consensus       180 ~---~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~---~~~~~  245 (287)
T 2wei_A          180 M---KDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--------ILKRVETGKYA---FDLPQ  245 (287)
T ss_dssp             C---SCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCC---CCSGG
T ss_pred             c---ccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHcCCCC---CCchh
Confidence            2   334588999999987       799999999999999999997653321        22222222111   11112


Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          336 DEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       336 ~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...+++.+.+++.+||+.||++|||++|
T Consensus       246 ~~~~~~~~~~li~~~l~~dp~~Rps~~e  273 (287)
T 2wei_A          246 WRTISDDAKDLIRKMLTFHPSLRITATQ  273 (287)
T ss_dssp             GTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             hhhcCHHHHHHHHHHcccChhhCcCHHH
Confidence            2345678999999999999999999753


No 221
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=3.7e-38  Score=295.11  Aligned_cols=242  Identities=18%  Similarity=0.159  Sum_probs=172.0

Q ss_pred             ccccccccCCcceeeccC-CeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeCC------ceeEEEeccCC
Q 039471          110 QSLISFNLTNSKFFFLHS-NEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGN------RRTLIYEFMPN  182 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~-~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~~  182 (363)
                      ..++.+++|.++.+.... +.||+|++......   ..+|+.+++.++|+||+++++++....      ..++||||+++
T Consensus        46 ~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~---~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~  122 (394)
T 4e7w_A           46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF---KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE  122 (394)
T ss_dssp             EEEEEETTEEEEEEEETTTEEEEEEEEECCTTS---CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSE
T ss_pred             EEEeeCCCeEEEEEEECCCCeEEEEEEecCcch---HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCc
Confidence            445666666666555433 34999988644322   237999999999999999999985543      37899999986


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEc-CCCCeeEeccccceeccCCc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD-HNFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~-~~~~~kl~Dfg~a~~~~~~~  261 (363)
                       ++.+.+....  .....+++..++.++.||+.||+|||+   .+|+||||||+|||++ .++.+||+|||+++......
T Consensus       123 -~l~~~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~  196 (394)
T 4e7w_A          123 -TVYRASRHYA--KLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE  196 (394)
T ss_dssp             -EHHHHHHHHH--HTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred             -cHHHHHHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence             4444443211  123679999999999999999999999   9999999999999999 79999999999998875544


Q ss_pred             cccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHH--------HHHHhhhc
Q 039471          262 SIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEW--------IYNRMRLG  324 (363)
Q Consensus       262 ~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~  324 (363)
                      ..   ....+|..|+|||++         +|||||||++|||++|+.||...........+...        +.......
T Consensus       197 ~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~  273 (394)
T 4e7w_A          197 PN---VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNY  273 (394)
T ss_dssp             CC---CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGG
T ss_pred             CC---cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence            32   345689999999986         79999999999999999999875543221111100        00000000


Q ss_pred             cccc-cccCC-----CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          325 QELC-LDFEE-----DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       325 ~~~~-~~~~~-----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .... .....     ......++++.+++.+||+.||++|||+.|
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  318 (394)
T 4e7w_A          274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIE  318 (394)
T ss_dssp             SSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             hhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHH
Confidence            0000 00000     011235678999999999999999999753


No 222
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=1.1e-38  Score=296.96  Aligned_cols=225  Identities=14%  Similarity=0.133  Sum_probs=164.6

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccC----CcChhHHHHHH---HHHhccCCCceeeee-------eeeeeCC--
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHL----KGNGQEFINEV---ATIGRIHHFHIVRLL-------GFCSEGN--  171 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~----~~~~~~~~~E~---~~l~~l~h~niv~~~-------~~~~~~~--  171 (363)
                      ..++.+++|.++.+...  ++.||||++...    ....+.+.+|+   +.+++++||||++++       +++.+.+  
T Consensus        79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~  158 (377)
T 3byv_A           79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK  158 (377)
T ss_dssp             EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSC
T ss_pred             ceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCc
Confidence            44566666666555533  455999999632    22346788999   555566799999998       5555443  


Q ss_pred             ---------------ceeEEEeccCCCCHHHHhhhcCC-CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCC
Q 039471          172 ---------------RRTLIYEFMPNGSLQKFIFSKTN-SSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKP  235 (363)
Q Consensus       172 ---------------~~~lv~e~~~~~sL~~~l~~~~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp  235 (363)
                                     ..+++|||+ +|+|.+++..... ......+++..+..++.||+.||+|||+   .+|+||||||
T Consensus       159 ~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDikp  234 (377)
T 3byv_A          159 KMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRP  234 (377)
T ss_dssp             SEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSCCCG
T ss_pred             cccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCH
Confidence                           378999999 5799999965321 1112345568899999999999999999   9999999999


Q ss_pred             CceEEcCCCCeeEeccccceeccCCccccccccccccccccCCccc-------------------cCceehhHHHHHHhc
Q 039471          236 HNILLDHNFQPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPELF-------------------SRNFCYGMMLLEMVG  296 (363)
Q Consensus       236 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-------------------~Di~slG~il~el~~  296 (363)
                      +|||++.++.+||+|||+++.....     .....| ..|+|||++                   +||||||+++|||++
T Consensus       235 ~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ellt  308 (377)
T 3byv_A          235 VDIVLDQRGGVFLTGFEHLVRDGAR-----VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC  308 (377)
T ss_dssp             GGEEECTTCCEEECCGGGCEETTCE-----EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHH
T ss_pred             HHEEEcCCCCEEEEechhheecCCc-----ccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHH
Confidence            9999999999999999999864431     134457 899999985                   599999999999999


Q ss_pred             CCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          297 CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       297 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      |+.||.........        ..+.           .....+++.+.+++.+||+.||++|||++|
T Consensus       309 g~~Pf~~~~~~~~~--------~~~~-----------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e  356 (377)
T 3byv_A          309 ADLPITKDAALGGS--------EWIF-----------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQ  356 (377)
T ss_dssp             SSCCC------CCS--------GGGG-----------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred             CCCCCcccccccch--------hhhh-----------hhccCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence            99999764432211        0000           011234567999999999999999999854


No 223
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=6.1e-38  Score=290.74  Aligned_cols=238  Identities=18%  Similarity=0.263  Sum_probs=159.0

Q ss_pred             ccccccccCCcceeec--cCCeeEEEEcccCCc---ChhHHHHHHHHHhccCCCceeeeeeeeeeC------CceeEEEe
Q 039471          110 QSLISFNLTNSKFFFL--HSNEIAVKMLEHLKG---NGQEFINEVATIGRIHHFHIVRLLGFCSEG------NRRTLIYE  178 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~lv~e  178 (363)
                      ..++.+++|.++.+..  .+..||||++.....   ..+++.+|++++++++|+||+++++++...      ...++++|
T Consensus        35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e  114 (367)
T 2fst_X           35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH  114 (367)
T ss_dssp             EECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred             eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEec
Confidence            4455556665555432  244599999964332   235788999999999999999999998653      56799999


Q ss_pred             ccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceecc
Q 039471          179 FMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS  258 (363)
Q Consensus       179 ~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~  258 (363)
                      ++ +++|.+++..       ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       115 ~~-~~~L~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~  183 (367)
T 2fst_X          115 LM-GADLNNIVKC-------QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTA  183 (367)
T ss_dssp             CC-CEECC------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred             cc-CCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence            99 6899998832       469999999999999999999999   999999999999999999999999999998754


Q ss_pred             CCccccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHH-------HHHhh
Q 039471          259 KDISIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWI-------YNRMR  322 (363)
Q Consensus       259 ~~~~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~  322 (363)
                      ...     ....||..|+|||++         +|+|||||++|||++|+.||...........+...+       ...+.
T Consensus       184 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~  258 (367)
T 2fst_X          184 DEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS  258 (367)
T ss_dssp             ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCC
T ss_pred             ccC-----CCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence            321     345689999999976         799999999999999999997654322110000000       00000


Q ss_pred             hc--c---ccccccCCCC----cHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          323 LG--Q---ELCLDFEEDG----DEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       323 ~~--~---~~~~~~~~~~----~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..  .   ..........    ....++.+.+++.+||+.||++|||++|
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e  308 (367)
T 2fst_X          259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ  308 (367)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             hHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHH
Confidence            00  0   0000000000    1123567899999999999999999753


No 224
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=1.9e-37  Score=284.31  Aligned_cols=230  Identities=21%  Similarity=0.243  Sum_probs=151.7

Q ss_pred             ccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHH-HHhccCCCceeeeeeeeee----CCceeEEEeccCCCC
Q 039471          112 LISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVA-TIGRIHHFHIVRLLGFCSE----GNRRTLIYEFMPNGS  184 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~~s  184 (363)
                      ++.+++|.++.+...  ++.||||++....    ...+|+. .++.++|+||+++++++..    +...++||||+++|+
T Consensus        37 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~  112 (336)
T 3fhr_A           37 LGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGE  112 (336)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEE
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCC
Confidence            456666666555444  4559999986432    2233333 3556689999999999875    456899999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcC---CCCeeEeccccceeccCCc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDH---NFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~---~~~~kl~Dfg~a~~~~~~~  261 (363)
                      |.+++....    ...+++..++.++.|++.||+|||+   .+|+||||||+|||++.   ++.+||+|||+++......
T Consensus       113 L~~~l~~~~----~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~  185 (336)
T 3fhr_A          113 LFSRIQERG----DQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA  185 (336)
T ss_dssp             HHHHHHTC-----CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----
T ss_pred             HHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEeccccceeccccc
Confidence            999996432    2569999999999999999999999   99999999999999986   4559999999998765432


Q ss_pred             cccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCC
Q 039471          262 SIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEE  333 (363)
Q Consensus       262 ~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (363)
                      .    ....+|+.|+|||++        +|+||||+++|||++|+.||...........    ....+..+   ......
T Consensus       186 ~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----~~~~~~~~---~~~~~~  254 (336)
T 3fhr_A          186 L----QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG----MKRRIRLG---QYGFPN  254 (336)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CCCT
T ss_pred             c----ccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh----HHHhhhcc---ccccCc
Confidence            2    345589999999998        7999999999999999999976543221100    01111111   111112


Q ss_pred             CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          334 DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       334 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .....++..+.+++.+||+.||++|||++|
T Consensus       255 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  284 (336)
T 3fhr_A          255 PEWSEVSEDAKQLIRLLLKTDPTERLTITQ  284 (336)
T ss_dssp             TTSTTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             hhhccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            222356778999999999999999999864


No 225
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=5.1e-38  Score=296.49  Aligned_cols=242  Identities=19%  Similarity=0.211  Sum_probs=172.2

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeeeeeC------CceeEEEeccC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEG------NRRTLIYEFMP  181 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~~  181 (363)
                      ..++.+++|.++.+...  ++.||||++.....   .+.+|++++++++|+||+++++++...      ...++||||++
T Consensus        60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~  136 (420)
T 1j1b_A           60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP  136 (420)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCC
T ss_pred             eEEeeCCCEEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhccc
Confidence            34566666666665553  44599999864432   234799999999999999999998532      23679999997


Q ss_pred             CCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCC-CCeeEeccccceeccCC
Q 039471          182 NGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHN-FQPKISDFGLAKLCSKD  260 (363)
Q Consensus       182 ~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~-~~~kl~Dfg~a~~~~~~  260 (363)
                      + +|.+.+....  .....+++..++.++.||+.||+|||+   .+|+||||||+|||++.+ +.+||+|||+++.....
T Consensus       137 ~-~l~~~~~~~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~  210 (420)
T 1j1b_A          137 E-TVYRVARHYS--RAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG  210 (420)
T ss_dssp             E-EHHHHHHHHH--HTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             c-cHHHHHHHHh--hccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhhcccC
Confidence            5 7777664321  123679999999999999999999999   999999999999999965 56899999999976554


Q ss_pred             ccccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHH----HHHhhhc---
Q 039471          261 ISIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWI----YNRMRLG---  324 (363)
Q Consensus       261 ~~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~---  324 (363)
                      ...   ....||..|+|||++         +|||||||++|||++|+.||...........+...+    .+.+...   
T Consensus       211 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~  287 (420)
T 1j1b_A          211 EPN---VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN  287 (420)
T ss_dssp             CCC---CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSC
T ss_pred             CCc---eeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChh
Confidence            332   345689999999987         699999999999999999998754332211110000    0000000   


Q ss_pred             -cccccc-cCCC-----CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          325 -QELCLD-FEED-----GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       325 -~~~~~~-~~~~-----~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       ...... ....     .....+.++.+|+.+||+.||++|||+.|
T Consensus       288 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e  333 (420)
T 1j1b_A          288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE  333 (420)
T ss_dssp             CCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             hhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHH
Confidence             000000 0000     11234678999999999999999999753


No 226
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=9.6e-38  Score=289.10  Aligned_cols=239  Identities=19%  Similarity=0.197  Sum_probs=166.1

Q ss_pred             ccccccccCCcceeec-cCCeeEEEEcccCCcC------------hhHHHHHHHHHhccCCCceeeeeeeeee-----CC
Q 039471          110 QSLISFNLTNSKFFFL-HSNEIAVKMLEHLKGN------------GQEFINEVATIGRIHHFHIVRLLGFCSE-----GN  171 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~-~~~~vAvK~~~~~~~~------------~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~  171 (363)
                      ..++.+++|.++.+.. .+..||||++......            .+.+.+|++++++++|+||+++++++..     ..
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  107 (362)
T 3pg1_A           28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMH  107 (362)
T ss_dssp             EEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCC
T ss_pred             EEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcc
Confidence            3445555555554432 2445999998643221            1678999999999999999999999843     34


Q ss_pred             ceeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEecc
Q 039471          172 RRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDF  251 (363)
Q Consensus       172 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Df  251 (363)
                      ..++||||++ ++|.+++...     ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+||
T Consensus       108 ~~~lv~e~~~-~~l~~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Df  178 (362)
T 3pg1_A          108 KLYLVTELMR-TDLAQVIHDQ-----RIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDF  178 (362)
T ss_dssp             EEEEEEECCS-EEHHHHHHCT-----TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCT
T ss_pred             eEEEEEccCC-CCHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEEcCCCCEEEEec
Confidence            6899999997 5888888532     2579999999999999999999999   99999999999999999999999999


Q ss_pred             ccceeccCCccccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHH-------
Q 039471          252 GLAKLCSKDISIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPE-------  315 (363)
Q Consensus       252 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~-------  315 (363)
                      |+++........   ....||..|+|||++         +|+||||+++|||++|+.||.............+       
T Consensus       179 g~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  255 (362)
T 3pg1_A          179 NLAREDTADANK---THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI  255 (362)
T ss_dssp             TC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCH
T ss_pred             Cccccccccccc---ceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCh
Confidence            999865443322   345689999999976         7999999999999999999976543221100000       


Q ss_pred             --HH-------HHHhhhccccccccCCC----CcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          316 --WI-------YNRMRLGQELCLDFEED----GDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       316 --~~-------~~~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                        +.       ...+.   .........    .....++.+.+++.+||+.||++|||++|
T Consensus       256 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  313 (362)
T 3pg1_A          256 EDVVMFSSPSARDYLR---NSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQ  313 (362)
T ss_dssp             HHHHHTSCHHHHHHTT---TCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHhhhccchhhhHHHH---hhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHH
Confidence              00       00000   000000000    11233567999999999999999999754


No 227
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=2.9e-37  Score=305.91  Aligned_cols=230  Identities=22%  Similarity=0.353  Sum_probs=175.4

Q ss_pred             ccccccccCCcceeeccC-----CeeEEEEcccCCc--ChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCC
Q 039471          110 QSLISFNLTNSKFFFLHS-----NEIAVKMLEHLKG--NGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~-----~~vAvK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      ..++.+++|.++.+....     ..||||++.....  ..+.|.+|+.++++++||||+++++++.+ +..++||||+++
T Consensus       396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~lv~E~~~~  474 (656)
T 2j0j_A          396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTL  474 (656)
T ss_dssp             EEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTT
T ss_pred             eEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEEEEEcCCC
Confidence            335666666665554422     1299999874332  23678999999999999999999999854 568999999999


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      |+|.+++....     ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus       475 g~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~  546 (656)
T 2j0j_A          475 GELRSFLQVRK-----FSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY  546 (656)
T ss_dssp             CBHHHHHHHTT-----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred             CcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence            99999996432     468999999999999999999999   9999999999999999999999999999987654432


Q ss_pred             ccccccccccccccCCccc--------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhccccccccCC
Q 039471          263 IVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEE  333 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (363)
                      . ......+|+.|+|||++        +|+||||+++|||++ |..||.......        ....+..+...      
T Consensus       547 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--------~~~~i~~~~~~------  611 (656)
T 2j0j_A          547 Y-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--------VIGRIENGERL------  611 (656)
T ss_dssp             --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHHTCCC------
T ss_pred             e-eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH--------HHHHHHcCCCC------
Confidence            2 12334567899999987        899999999999997 889987643321        22222222211      


Q ss_pred             CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          334 DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       334 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..+..+++.+.+++.+||+.||++|||++|
T Consensus       612 ~~~~~~~~~l~~li~~~l~~dP~~RPs~~e  641 (656)
T 2j0j_A          612 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTE  641 (656)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCccccHHHHHHHHHHcCCChhHCcCHHH
Confidence            223345678999999999999999999854


No 228
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=6.5e-37  Score=282.28  Aligned_cols=239  Identities=17%  Similarity=0.254  Sum_probs=176.3

Q ss_pred             ccccccCCcceeecc--C-CeeEEEEcccCCcChhHHHHHHHHHhccCCCc------eeeeeeeeeeCCceeEEEeccCC
Q 039471          112 LISFNLTNSKFFFLH--S-NEIAVKMLEHLKGNGQEFINEVATIGRIHHFH------IVRLLGFCSEGNRRTLIYEFMPN  182 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~--~-~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~~lv~e~~~~  182 (363)
                      ++.+++|.++.+...  + ..||||++.......+.+.+|+.++++++|++      ++.+++++...+..++||||+ +
T Consensus        27 lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~  105 (355)
T 2eu9_A           27 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-G  105 (355)
T ss_dssp             EEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC-C
T ss_pred             eeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc-C
Confidence            445555555444322  2 35999999765555678889999999998766      899999999999999999999 5


Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEE-------------------cCC
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL-------------------DHN  243 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill-------------------~~~  243 (363)
                      ++|.+++....    ...+++..++.++.||+.||+|||+   .+|+||||||+|||+                   +.+
T Consensus       106 ~~l~~~l~~~~----~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~  178 (355)
T 2eu9_A          106 KNTFEFLKENN----FQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKN  178 (355)
T ss_dssp             CBHHHHHHHTT----TCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESC
T ss_pred             CChHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccccccccccccccccCC
Confidence            67777775432    2469999999999999999999999   999999999999999                   667


Q ss_pred             CCeeEeccccceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccc---
Q 039471          244 FQPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIY---  312 (363)
Q Consensus       244 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~---  312 (363)
                      +.+||+|||+++......     ....||..|+|||++        +|+||||+++|||++|+.||...........   
T Consensus       179 ~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  253 (355)
T 2eu9_A          179 TSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK  253 (355)
T ss_dssp             CCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            899999999998754432     345689999999987        8999999999999999999976543221100   


Q ss_pred             ----hHHHHHHHhhhccc----------------------cccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          313 ----FPEWIYNRMRLGQE----------------------LCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       313 ----~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                          .+............                      .............+..+.+++.+||+.||++|||++|
T Consensus       254 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  330 (355)
T 2eu9_A          254 ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAE  330 (355)
T ss_dssp             HHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHH
Confidence                11111111000000                      0000011223355678999999999999999999854


No 229
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=4.6e-37  Score=285.53  Aligned_cols=237  Identities=19%  Similarity=0.236  Sum_probs=170.2

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeCCce------eEEEe
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEGNRR------TLIYE  178 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~------~lv~e  178 (363)
                      ..++.+++|.++.+...  ++.||||++......   .+++.+|+.++++++|+||+++++++......      ++|||
T Consensus        48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e  127 (371)
T 4exu_A           48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP  127 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEE
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEc
Confidence            34556666655555433  445999999754332   35788999999999999999999999876654      99999


Q ss_pred             ccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceecc
Q 039471          179 FMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS  258 (363)
Q Consensus       179 ~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~  258 (363)
                      |+. ++|.+++.        ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       128 ~~~-~~l~~~~~--------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  195 (371)
T 4exu_A          128 FMQ-TDLQKIMG--------MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  195 (371)
T ss_dssp             CCC-EEHHHHTT--------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred             ccc-ccHHHHhh--------cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence            997 68988872        459999999999999999999999   999999999999999999999999999998654


Q ss_pred             CCccccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHH-------HHHHhh
Q 039471          259 KDISIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEW-------IYNRMR  322 (363)
Q Consensus       259 ~~~~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~  322 (363)
                      ...     ....||..|+|||++         +|+||||+++|||++|+.||...............       ....+.
T Consensus       196 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  270 (371)
T 4exu_A          196 AEM-----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN  270 (371)
T ss_dssp             ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCS
T ss_pred             cCc-----CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhh
Confidence            332     345689999999976         79999999999999999999765432211000000       000000


Q ss_pred             hc------cccccccCC---CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          323 LG------QELCLDFEE---DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       323 ~~------~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ..      +........   ......++.+.+++.+||++||++|||++|
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  320 (371)
T 4exu_A          271 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQ  320 (371)
T ss_dssp             CHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             hhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHH
Confidence            00      000000000   011234678999999999999999999854


No 230
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=6.5e-37  Score=285.60  Aligned_cols=186  Identities=23%  Similarity=0.232  Sum_probs=149.9

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhccC-CC-----ceeeeeeeeeeCCceeEEEeccC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRIH-HF-----HIVRLLGFCSEGNRRTLIYEFMP  181 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~~~~lv~e~~~  181 (363)
                      ..++.+++|.++.+...  ++.||||+++......+++.+|+.+++.++ |+     +|+++++++...+..++||||++
T Consensus        60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~  139 (382)
T 2vx3_A           60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS  139 (382)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCC
T ss_pred             EEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCC
Confidence            33455566555555433  344999999855444567788999888875 44     59999999999999999999996


Q ss_pred             CCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEc--CCCCeeEeccccceeccC
Q 039471          182 NGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD--HNFQPKISDFGLAKLCSK  259 (363)
Q Consensus       182 ~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~--~~~~~kl~Dfg~a~~~~~  259 (363)
                       ++|.+++.....    ..+++..+..++.|++.||.|||+. +.+|+||||||+|||++  .++.+||+|||+++....
T Consensus       140 -~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~  213 (382)
T 2vx3_A          140 -YNLYDLLRNTNF----RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ  213 (382)
T ss_dssp             -CBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred             -CCHHHHHhhcCc----CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc
Confidence             599999965432    4589999999999999999999941 17899999999999995  477899999999988754


Q ss_pred             CccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchh
Q 039471          260 DISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVE  306 (363)
Q Consensus       260 ~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~  306 (363)
                      ..     ....||+.|+|||++        +|||||||++|||++|+.||.....
T Consensus       214 ~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  263 (382)
T 2vx3_A          214 RI-----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE  263 (382)
T ss_dssp             CC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             cc-----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            32     345689999999987        8999999999999999999986543


No 231
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=6.8e-37  Score=279.13  Aligned_cols=239  Identities=24%  Similarity=0.323  Sum_probs=176.6

Q ss_pred             ccccccccCCcceeecc---CCeeEEEEcccCC---cChhHHHHHHHHHhcc---CCCceeeeeeeee-----eCCceeE
Q 039471          110 QSLISFNLTNSKFFFLH---SNEIAVKMLEHLK---GNGQEFINEVATIGRI---HHFHIVRLLGFCS-----EGNRRTL  175 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~---~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~~~~~~~-----~~~~~~l  175 (363)
                      ..++.+++|.++.+...   ++.||||++....   .....+.+|+.+++++   +|+||+++++++.     .....++
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l   96 (326)
T 1blx_A           17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL   96 (326)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEE
T ss_pred             eeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEE
Confidence            34455566665555432   3349999986432   2335677888888777   7999999999987     5568899


Q ss_pred             EEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccce
Q 039471          176 IYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK  255 (363)
Q Consensus       176 v~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~  255 (363)
                      ||||++ ++|.+++.....    ..+++..+..++.|++.||.|||+   .+|+|+||||+||+++.++.+||+|||+++
T Consensus        97 v~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~  168 (326)
T 1blx_A           97 VFEHVD-QDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLAR  168 (326)
T ss_dssp             EEECCS-CBHHHHHHHSCT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             EEecCC-CCHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecCcccc
Confidence            999997 699999965432    458999999999999999999999   999999999999999999999999999998


Q ss_pred             eccCCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccc-
Q 039471          256 LCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQE-  326 (363)
Q Consensus       256 ~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  326 (363)
                      .......   .....||..|+|||++        +|+||||+++|||++|+.||.........    ..+......... 
T Consensus       169 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~i~~~~~~~~~~  241 (326)
T 1blx_A          169 IYSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL----GKILDVIGLPGEE  241 (326)
T ss_dssp             CCCGGGG---GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHHHHCCCCGG
T ss_pred             cccCCCC---ccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH----HHHHHHcCCCCcc
Confidence            7654322   2445689999999987        79999999999999999999865443211    111111100000 


Q ss_pred             -c--------------ccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          327 -L--------------CLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       327 -~--------------~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       .              ...........++..+.+++.+||+.||++|||++|
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  293 (326)
T 1blx_A          242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS  293 (326)
T ss_dssp             GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHH
Confidence             0              000001122345678999999999999999999753


No 232
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=1.5e-37  Score=286.62  Aligned_cols=242  Identities=19%  Similarity=0.191  Sum_probs=172.8

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccCCc--ChhHHHHHHHHHhccCCCceeeeeeeeeeC-----CceeEEEeccC
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHLKG--NGQEFINEVATIGRIHHFHIVRLLGFCSEG-----NRRTLIYEFMP  181 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~  181 (363)
                      .++.+++|.++.+...  ++.||||++.....  ...++.+|+.++++++|+||+++++++...     ...++||||+.
T Consensus        18 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~   97 (353)
T 2b9h_A           18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ   97 (353)
T ss_dssp             EEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS
T ss_pred             EEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccC
Confidence            3455555555555443  44499999964332  235788999999999999999999987654     67899999997


Q ss_pred             CCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCc
Q 039471          182 NGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       182 ~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~  261 (363)
                       ++|.+++..       ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        98 -~~L~~~~~~-------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~  166 (353)
T 2b9h_A           98 -TDLHRVIST-------QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA  166 (353)
T ss_dssp             -EEHHHHHHH-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred             -ccHHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence             599999843       458999999999999999999999   999999999999999999999999999998765432


Q ss_pred             ccc--------ccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHH--------
Q 039471          262 SIV--------SRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEW--------  316 (363)
Q Consensus       262 ~~~--------~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~--------  316 (363)
                      ...        ......||..|+|||++         +|+||||+++|||++|+.||...............        
T Consensus       167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  246 (353)
T 2b9h_A          167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN  246 (353)
T ss_dssp             -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTT
T ss_pred             ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhc
Confidence            211        11234689999999976         79999999999999999999765432210000000        


Q ss_pred             ---------HHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          317 ---------IYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       317 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                               .......-...............++.+.+++.+||+.||++|||++|
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  302 (353)
T 2b9h_A          247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKE  302 (353)
T ss_dssp             TTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             cccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHH
Confidence                     00000000000000000011245677899999999999999999864


No 233
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=4.2e-37  Score=290.86  Aligned_cols=231  Identities=21%  Similarity=0.209  Sum_probs=167.7

Q ss_pred             ccccccccCCcc-eeeccCCeeEEEEcccCCcChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCCCCHHH
Q 039471          110 QSLISFNLTNSK-FFFLHSNEIAVKMLEHLKGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQK  187 (363)
Q Consensus       110 ~~~~~~~~~~~~-~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~  187 (363)
                      ..++.+++|.+. .....++.||||++...  ....+.+|+.+++++ +|+||+++++++.+....++||||++ |+|.+
T Consensus        30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~  106 (432)
T 3p23_A           30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPE--CFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQE  106 (432)
T ss_dssp             EEEEECGGGCEEEEEESSSSEEEEEEECTT--TEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHH
T ss_pred             CeeecCcCEEEEEEEEeCCeEEEEEEECHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHH
Confidence            345677777642 23345666999998643  234567899999999 79999999999999999999999996 59999


Q ss_pred             HhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcC-----CCCeeEeccccceeccCCcc
Q 039471          188 FIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDH-----NFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       188 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~-----~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      ++....     ..+.+..+..++.||+.||+|||+   .+|+||||||+|||++.     ...+||+|||+++.......
T Consensus       107 ~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~  178 (432)
T 3p23_A          107 YVEQKD-----FAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH  178 (432)
T ss_dssp             HHHSSS-----CCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred             HHHhcC-----CCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence            996433     334455677899999999999999   99999999999999953     33578999999987764422


Q ss_pred             c-cccccccccccccCCccc-----------cCceehhHHHHHHhc-CCCCCCcchhcccccchHHHHHHHhhhcccccc
Q 039471          263 I-VSRTAARGTSGYIAPELF-----------SRNFCYGMMLLEMVG-CRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCL  329 (363)
Q Consensus       263 ~-~~~~~~~gt~~y~aPE~~-----------~Di~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (363)
                      . .......||+.|+|||++           +|||||||++|||++ |..||........         .... +.....
T Consensus       179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~---------~~~~-~~~~~~  248 (432)
T 3p23_A          179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA---------NILL-GACSLD  248 (432)
T ss_dssp             -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH---------HHHT-TCCCCT
T ss_pred             ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH---------HHHh-ccCCcc
Confidence            1 122445699999999987           699999999999999 8888854322111         1111 111000


Q ss_pred             ccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          330 DFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       330 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                        ........+..+.+++.+||+.||++|||++|
T Consensus       249 --~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e  280 (432)
T 3p23_A          249 --CLHPEKHEDVIARELIEKMIAMDPQKRPSAKH  280 (432)
T ss_dssp             --TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             --ccCccccccHHHHHHHHHHHhCCHhhCCCHHH
Confidence              11122345677899999999999999999853


No 234
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=1.1e-37  Score=283.98  Aligned_cols=218  Identities=26%  Similarity=0.329  Sum_probs=173.7

Q ss_pred             ccccccCCcceeec--cCCeeEEEEcccCCc-------ChhHHHHHHHHHhccC--CCceeeeeeeeeeCCceeEEEecc
Q 039471          112 LISFNLTNSKFFFL--HSNEIAVKMLEHLKG-------NGQEFINEVATIGRIH--HFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       112 ~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~-------~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      ++.+++|.++.+..  .+..||||++.....       ..+.+.+|+.++++++  |+||+++++++..++..++|+|++
T Consensus        51 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~  130 (320)
T 3a99_A           51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP  130 (320)
T ss_dssp             CSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECC
T ss_pred             EeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcC
Confidence            44555555554432  234499999964321       2356778999999996  599999999999999999999999


Q ss_pred             CC-CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEc-CCCCeeEeccccceecc
Q 039471          181 PN-GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD-HNFQPKISDFGLAKLCS  258 (363)
Q Consensus       181 ~~-~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~-~~~~~kl~Dfg~a~~~~  258 (363)
                      .+ ++|.+++...      ..+++..++.++.|++.||+|||+   .+|+||||||+|||++ +++.+||+|||+++...
T Consensus       131 ~~~~~L~~~l~~~------~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~  201 (320)
T 3a99_A          131 EPVQDLFDFITER------GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK  201 (320)
T ss_dssp             SSEEEHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             CCCccHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCccccccc
Confidence            76 8999999542      568999999999999999999999   9999999999999999 78899999999998876


Q ss_pred             CCccccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcccccc
Q 039471          259 KDISIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCL  329 (363)
Q Consensus       259 ~~~~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (363)
                      ....    ....||..|+|||++         +|+||||+++|||++|+.||.......              .+..   
T Consensus       202 ~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--------------~~~~---  260 (320)
T 3a99_A          202 DTVY----TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII--------------RGQV---  260 (320)
T ss_dssp             SSCB----CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH--------------HCCC---
T ss_pred             cccc----cCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhh--------------cccc---
Confidence            4322    345689999999977         699999999999999999997543211              0110   


Q ss_pred             ccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          330 DFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       330 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                          .....+++.+.+++.+||+.||++|||++|
T Consensus       261 ----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  290 (320)
T 3a99_A          261 ----FFRQRVSSECQHLIRWCLALRPSDRPTFEE  290 (320)
T ss_dssp             ----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ----cccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence                111234567999999999999999999864


No 235
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=8.6e-37  Score=291.81  Aligned_cols=238  Identities=19%  Similarity=0.202  Sum_probs=178.3

Q ss_pred             cccccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHHhccCC-CceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          109 FQSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATIGRIHH-FHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ...++.+++|.++.+...  +..||||++.... ..+++.+|+++++.++| +++..+..++.+....++||||+ +++|
T Consensus        12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL   89 (483)
T 3sv0_A           12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSL   89 (483)
T ss_dssp             CCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred             EEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCH
Confidence            344566666666665533  4559999876443 34568899999999986 55666666677888999999999 8999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEE---cCCCCeeEeccccceeccCCcc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL---DHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill---~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      .+++....     ..+++..++.++.||+.||+|||+   .+|+||||||+|||+   +.++.+||+|||+++.......
T Consensus        90 ~~ll~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~  161 (483)
T 3sv0_A           90 EDLFNFCS-----RKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST  161 (483)
T ss_dssp             HHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             HHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence            99995432     569999999999999999999999   999999999999999   6889999999999998765432


Q ss_pred             cc-----ccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhcccccc
Q 039471          263 IV-----SRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCL  329 (363)
Q Consensus       263 ~~-----~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (363)
                      ..     ......||..|+|||++        +||||||+++|||++|+.||...........+............    
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~----  237 (483)
T 3sv0_A          162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI----  237 (483)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH----
T ss_pred             ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH----
Confidence            11     12356699999999998        79999999999999999999765433221111111111111000    


Q ss_pred             ccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          330 DFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       330 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                         ......++.++.+++.+||+.+|++||++++
T Consensus       238 ---~~l~~~~p~~l~~li~~cl~~dP~~RPs~~e  268 (483)
T 3sv0_A          238 ---EALCRGYPTEFASYFHYCRSLRFDDKPDYSY  268 (483)
T ss_dssp             ---HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHH
T ss_pred             ---HHHhcCCcHHHHHHHHHHhcCChhhCcCHHH
Confidence               0011233568999999999999999999753


No 236
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=4.7e-37  Score=285.44  Aligned_cols=240  Identities=19%  Similarity=0.273  Sum_probs=174.2

Q ss_pred             cccccccCCcceeec--cCCeeEEEEcccCCcChhHHHHHHHHHhccC-----------CCceeeeeeeeeeCC----ce
Q 039471          111 SLISFNLTNSKFFFL--HSNEIAVKMLEHLKGNGQEFINEVATIGRIH-----------HFHIVRLLGFCSEGN----RR  173 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~--~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~~~~----~~  173 (363)
                      .++.+++|.++.+..  .++.||||++.......+.+.+|+.++++++           |+||+++++++...+    ..
T Consensus        26 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  105 (373)
T 1q8y_A           26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHV  105 (373)
T ss_dssp             EEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEE
T ss_pred             eeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceE
Confidence            345555555555442  3445999999765555577889999999886           789999999987644    78


Q ss_pred             eEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CceecCCCCCceEEc------CCCCe
Q 039471          174 TLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQ-RILHFDIKPHNILLD------HNFQP  246 (363)
Q Consensus       174 ~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~i~H~dikp~Nill~------~~~~~  246 (363)
                      +++||++ +++|.+++.....    ..+++..+..++.||+.||+|||+   . +|+||||||+|||++      ..+.+
T Consensus       106 ~lv~e~~-~~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~~~~~~  177 (373)
T 1q8y_A          106 VMVFEVL-GENLLALIKKYEH----RGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPENLIQI  177 (373)
T ss_dssp             EEEECCC-CEEHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTTTEEEE
T ss_pred             EEEEecC-CCCHHHHHHHhhc----cCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCcCcceE
Confidence            9999999 8899999965432    559999999999999999999999   8 999999999999995      34479


Q ss_pred             eEeccccceeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccc------
Q 039471          247 KISDFGLAKLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIY------  312 (363)
Q Consensus       247 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~------  312 (363)
                      ||+|||++.......     ....||..|+|||++        +|+||||+++|||++|+.||...........      
T Consensus       178 kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  252 (373)
T 1q8y_A          178 KIADLGNACWYDEHY-----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ  252 (373)
T ss_dssp             EECCCTTCEETTBCC-----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred             EEcccccccccCCCC-----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHH
Confidence            999999998765432     334689999999988        8999999999999999999976542211000      


Q ss_pred             -------hHHHHHHHhhhc-------ccc-------------ccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          313 -------FPEWIYNRMRLG-------QEL-------------CLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       313 -------~~~~~~~~~~~~-------~~~-------------~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                             .+..........       ...             ........+...+..+.+++.+||+.||++|||++|
T Consensus       253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  330 (373)
T 1q8y_A          253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG  330 (373)
T ss_dssp             HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred             HHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence                   000000000000       000             000112345678899999999999999999999864


No 237
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=3.1e-37  Score=281.72  Aligned_cols=238  Identities=20%  Similarity=0.272  Sum_probs=160.7

Q ss_pred             cccccccccCCcceeecc--CCeeEEEEcccCCc--ChhHHHHHHH-HHhccCCCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          109 FQSLISFNLTNSKFFFLH--SNEIAVKMLEHLKG--NGQEFINEVA-TIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~--~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ...++.+++|.++.+...  ++.||||++.....  ...++..|+. +++.++|+||+++++++.+++..++||||+++ 
T Consensus        27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-  105 (327)
T 3aln_A           27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-  105 (327)
T ss_dssp             -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred             hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence            344566666666555544  44599999975432  2245666666 67778999999999999999999999999975 


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQ-RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      +|.+++..... .....+++..+..++.|++.||.|||+   . +++||||||+||+++.++.+||+|||+++.......
T Consensus       106 ~l~~~~~~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~  181 (327)
T 3aln_A          106 SFDKFYKYVYS-VLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA  181 (327)
T ss_dssp             EHHHHHHHHHH-TTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC------
T ss_pred             ChHHHHHHHHh-hhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccc
Confidence            88888753211 123679999999999999999999999   8 999999999999999999999999999987654432


Q ss_pred             ccccccccccccccCCccc------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccc
Q 039471          263 IVSRTAARGTSGYIAPELF------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLD  330 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (363)
                      .   ....||..|+|||++            +|+||||+++|||++|+.||.........       ......+..  ..
T Consensus       182 ~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-------~~~~~~~~~--~~  249 (327)
T 3aln_A          182 K---TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ-------LTQVVKGDP--PQ  249 (327)
T ss_dssp             ---------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSCC--CC
T ss_pred             c---ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH-------HHHHhcCCC--CC
Confidence            2   334689999999986            69999999999999999999754321110       011111111  11


Q ss_pred             cCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          331 FEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       331 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .........++.+.+++.+||+.||++|||++|
T Consensus       250 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e  282 (327)
T 3aln_A          250 LSNSEEREFSPSFINFVNLCLTKDESKRPKYKE  282 (327)
T ss_dssp             CCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCcccccCCHHHHHHHHHHhhCChhhCcCHHH
Confidence            111122345678999999999999999999853


No 238
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.4e-37  Score=282.11  Aligned_cols=219  Identities=23%  Similarity=0.264  Sum_probs=170.7

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccCCc-------ChhHHHHHHHHHhcc----CCCceeeeeeeeeeCCceeEEE
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHLKG-------NGQEFINEVATIGRI----HHFHIVRLLGFCSEGNRRTLIY  177 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~-------~~~~~~~E~~~l~~l----~h~niv~~~~~~~~~~~~~lv~  177 (363)
                      .++.+++|.++.+...  +..||||++.....       ....+.+|+.++.++    +|+||+++++++...+..++|+
T Consensus        38 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~  117 (312)
T 2iwi_A           38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVL  117 (312)
T ss_dssp             EEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEE
T ss_pred             EEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEE
Confidence            3456666666555442  34599999964432       224566899999988    8999999999999989999999


Q ss_pred             ec-cCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEc-CCCCeeEeccccce
Q 039471          178 EF-MPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD-HNFQPKISDFGLAK  255 (363)
Q Consensus       178 e~-~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~-~~~~~kl~Dfg~a~  255 (363)
                      |+ +.+++|.+++...      ..+++..++.++.|++.||+|||+   .+|+||||||+||+++ .++.+||+|||++.
T Consensus       118 e~~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~  188 (312)
T 2iwi_A          118 ERPLPAQDLFDYITEK------GPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGA  188 (312)
T ss_dssp             ECCSSEEEHHHHHHHH------CSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEEECCCSSCE
T ss_pred             EecCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEEEEEcchhh
Confidence            99 7899999999543      458999999999999999999999   9999999999999999 88999999999998


Q ss_pred             eccCCccccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccc
Q 039471          256 LCSKDISIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQE  326 (363)
Q Consensus       256 ~~~~~~~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (363)
                      .......    ....|+..|+|||++         +|+||||+++|||++|+.||.......          .    . .
T Consensus       189 ~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----------~----~-~  249 (312)
T 2iwi_A          189 LLHDEPY----TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEIL----------E----A-E  249 (312)
T ss_dssp             ECCSSCB----CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH----------H----T-C
T ss_pred             hcccCcc----cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHh----------h----h-c
Confidence            8765432    345589999999976         799999999999999999997542210          0    0 0


Q ss_pred             cccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          327 LCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       327 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                            ...+...+..+.+++.+||+.||++|||++|
T Consensus       250 ------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  280 (312)
T 2iwi_A          250 ------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEE  280 (312)
T ss_dssp             ------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             ------cCCcccCCHHHHHHHHHHccCChhhCcCHHH
Confidence                  1122345667899999999999999999864


No 239
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=2e-37  Score=283.61  Aligned_cols=228  Identities=22%  Similarity=0.262  Sum_probs=157.0

Q ss_pred             ccccccCCcceeec--cCCeeEEEEcccCC-cChhHHHHHHHHHhccC-CCceeeeeeeee--------eCCceeEEEec
Q 039471          112 LISFNLTNSKFFFL--HSNEIAVKMLEHLK-GNGQEFINEVATIGRIH-HFHIVRLLGFCS--------EGNRRTLIYEF  179 (363)
Q Consensus       112 ~~~~~~~~~~~~~~--~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~--------~~~~~~lv~e~  179 (363)
                      ++.+++|.++.+..  .++.||||++.... ...+.+.+|+.+++++. |+||+++++++.        .....+++|||
T Consensus        36 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~  115 (337)
T 3ll6_A           36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTEL  115 (337)
T ss_dssp             EECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEEC
T ss_pred             EccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEe
Confidence            45556665555544  34459999885433 33467889999999996 999999999984        34458999999


Q ss_pred             cCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--ceecCCCCCceEEcCCCCeeEeccccceec
Q 039471          180 MPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQR--ILHFDIKPHNILLDHNFQPKISDFGLAKLC  257 (363)
Q Consensus       180 ~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~dikp~Nill~~~~~~kl~Dfg~a~~~  257 (363)
                      +. |+|.+++.....   ...+++..++.++.||+.||+|||+   .+  |+||||||+|||++.++.+||+|||+++..
T Consensus       116 ~~-g~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  188 (337)
T 3ll6_A          116 CK-GQLVEFLKKMES---RGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI  188 (337)
T ss_dssp             CS-EEHHHHHHHHHT---TCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCC
T ss_pred             cC-CCHHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEecCccceec
Confidence            96 699998865321   2569999999999999999999999   88  999999999999999999999999999876


Q ss_pred             cCCcccc----------ccccccccccccCCccc-----------cCceehhHHHHHHhcCCCCCCcchhcccccchHHH
Q 039471          258 SKDISIV----------SRTAARGTSGYIAPELF-----------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEW  316 (363)
Q Consensus       258 ~~~~~~~----------~~~~~~gt~~y~aPE~~-----------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~  316 (363)
                      .......          ......||..|+|||++           +||||||+++|||++|+.||........       
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-------  261 (337)
T 3ll6_A          189 SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI-------  261 (337)
T ss_dssp             SSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred             cccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh-------
Confidence            5432211          11134589999999986           6999999999999999999965432210       


Q ss_pred             HHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          317 IYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ....      ...    ......+..+.+++.+||+.||++|||++|
T Consensus       262 ~~~~------~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  298 (337)
T 3ll6_A          262 VNGK------YSI----PPHDTQYTVFHSLIRAMLQVNPEERLSIAE  298 (337)
T ss_dssp             ----------CCC----CTTCCSSGGGHHHHHHHSCSSGGGSCCHHH
T ss_pred             hcCc------ccC----CcccccchHHHHHHHHHccCChhhCcCHHH
Confidence            0000      000    111122345889999999999999999754


No 240
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=2.5e-37  Score=281.19  Aligned_cols=231  Identities=22%  Similarity=0.318  Sum_probs=171.9

Q ss_pred             ccccccccCCcceeeccCCeeEEEEcccCC---cChhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCHH
Q 039471          110 QSLISFNLTNSKFFFLHSNEIAVKMLEHLK---GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~  186 (363)
                      ..++.+++|.++.+.. .+.||+|++....   ...+.+.+|+.++++++|+||+++++++.+....++||||+++++|.
T Consensus        39 ~~lg~G~~g~V~~~~~-~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~  117 (319)
T 2y4i_B           39 ELIGKGRFGQVYHGRW-HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLY  117 (319)
T ss_dssp             CBCCCSSSSEEEEEEE-SSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHH
T ss_pred             eEeccCCceEEEEEEE-cCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHH
Confidence            3344555555444433 3459999997432   33457889999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc---c
Q 039471          187 KFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS---I  263 (363)
Q Consensus       187 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~---~  263 (363)
                      +++...     ...+++..+..++.|++.||+|||+   .+++||||||+||+++ ++.+||+|||++........   .
T Consensus       118 ~~l~~~-----~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~  188 (319)
T 2y4i_B          118 SVVRDA-----KIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRE  188 (319)
T ss_dssp             HHTTSS-----CCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC----------C
T ss_pred             HHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCccccccccccccc
Confidence            999432     2468999999999999999999999   9999999999999998 67999999999876532211   1


Q ss_pred             cccccccccccccCCccc-----------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccc
Q 039471          264 VSRTAARGTSGYIAPELF-----------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQE  326 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~-----------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (363)
                      .......|+..|+|||++                 +||||||+++|||++|+.||.......        ....+..+..
T Consensus       189 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--------~~~~~~~~~~  260 (319)
T 2y4i_B          189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--------IIWQMGTGMK  260 (319)
T ss_dssp             CSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH--------HHHHHHTTCC
T ss_pred             cccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHhccCCC
Confidence            112334588999999975                 699999999999999999997643321        1222222211


Q ss_pred             cccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          327 LCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       327 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ...     .....+..+.+++.+||+.||++|||++|
T Consensus       261 ~~~-----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~  292 (319)
T 2y4i_B          261 PNL-----SQIGMGKEISDILLFCWAFEQEERPTFTK  292 (319)
T ss_dssp             CCC-----CCSSCCTTHHHHHHHHHCSSTTTSCCHHH
T ss_pred             CCC-----CcCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence            111     11134566999999999999999999853


No 241
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=4.4e-37  Score=279.00  Aligned_cols=231  Identities=21%  Similarity=0.264  Sum_probs=169.3

Q ss_pred             ccccccccCCcceeecc-CCeeEEEEcccCCcC---hhHHHHHHHHHhccC--CCceeeeeeeeeeCCceeEEEeccCCC
Q 039471          110 QSLISFNLTNSKFFFLH-SNEIAVKMLEHLKGN---GQEFINEVATIGRIH--HFHIVRLLGFCSEGNRRTLIYEFMPNG  183 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~-~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~~  183 (363)
                      ..++.+++|.++.+... +..||||++......   .+.+.+|+.++++++  |+||+++++++.++...++||| +.++
T Consensus        34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~  112 (313)
T 3cek_A           34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI  112 (313)
T ss_dssp             EEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSE
T ss_pred             EEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCC
Confidence            34455566655554433 344999999644322   357889999999997  5999999999999999999999 5578


Q ss_pred             CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          184 SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       184 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +|.+++...      ..+++..+..++.|++.||.|||+   .+|+||||||+|||+++ +.+||+|||+++........
T Consensus       113 ~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~  182 (313)
T 3cek_A          113 DLNSWLKKK------KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS  182 (313)
T ss_dssp             EHHHHHHHC------SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred             cHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence            999999543      468999999999999999999999   99999999999999975 78999999999877654332


Q ss_pred             cccccccccccccCCccc-------------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhc
Q 039471          264 VSRTAARGTSGYIAPELF-------------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLG  324 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~-------------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (363)
                      .......||..|+|||++                   +|+||||+++|||++|+.||........      .........
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~------~~~~~~~~~  256 (313)
T 3cek_A          183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS------KLHAIIDPN  256 (313)
T ss_dssp             -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH------HHHHHHCTT
T ss_pred             ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH------HHHHHHhcc
Confidence            223445689999999984                   6999999999999999999975432211      111111111


Q ss_pred             cccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          325 QELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      .      ....+...+..+.+++.+||+.||++|||++|
T Consensus       257 ~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e  289 (313)
T 3cek_A          257 H------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE  289 (313)
T ss_dssp             S------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             c------ccCCcccchHHHHHHHHHHccCCcccCcCHHH
Confidence            1      11112223567999999999999999999854


No 242
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=1.3e-36  Score=280.48  Aligned_cols=237  Identities=19%  Similarity=0.226  Sum_probs=170.8

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcC---hhHHHHHHHHHhccCCCceeeeeeeeeeCCc------eeEEEe
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGN---GQEFINEVATIGRIHHFHIVRLLGFCSEGNR------RTLIYE  178 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------~~lv~e  178 (363)
                      ..++.+++|.++.+...  ++.||||++......   .+++.+|+.++++++|+||+++++++.....      .++|||
T Consensus        30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e  109 (353)
T 3coi_A           30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP  109 (353)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred             eeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEec
Confidence            34556666655555433  445999999754322   3578899999999999999999999977653      499999


Q ss_pred             ccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceecc
Q 039471          179 FMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS  258 (363)
Q Consensus       179 ~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~  258 (363)
                      |++ ++|.+++.        ..+++..+..++.||+.||+|||+   .+|+||||||+||+++.++.+||+|||+++...
T Consensus       110 ~~~-~~l~~~~~--------~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  177 (353)
T 3coi_A          110 FMQ-TDLQKIMG--------LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  177 (353)
T ss_dssp             CCS-EEGGGTTT--------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred             ccc-CCHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence            997 58888772        358999999999999999999999   999999999999999999999999999998654


Q ss_pred             CCccccccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccch--------HHHHH---
Q 039471          259 KDISIVSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYF--------PEWIY---  318 (363)
Q Consensus       259 ~~~~~~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~--------~~~~~---  318 (363)
                      ...     ....+|..|+|||++         +|+||||+++|||++|+.||............        .++..   
T Consensus       178 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  252 (353)
T 3coi_A          178 AEM-----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN  252 (353)
T ss_dssp             -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCS
T ss_pred             CCc-----cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHh
Confidence            321     344689999999976         79999999999999999999765432110000        00000   


Q ss_pred             -----HHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          319 -----NRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       319 -----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                           ..+..-...............++.+.+++.+||+.||++|||++|
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e  302 (353)
T 3coi_A          253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQ  302 (353)
T ss_dssp             CHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             hHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHH
Confidence                 000000000000011122355778999999999999999999753


No 243
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=4.1e-37  Score=279.59  Aligned_cols=243  Identities=21%  Similarity=0.240  Sum_probs=169.1

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCC-cChhHHHHHHHHHhccCCCceeeeeeeee--------------eCCc
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLK-GNGQEFINEVATIGRIHHFHIVRLLGFCS--------------EGNR  172 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~--------------~~~~  172 (363)
                      ..++.+++|.++.+...  ++.||||++.... ...+++.+|++++++++|+||+++++++.              +...
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~   96 (320)
T 2i6l_A           17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNS   96 (320)
T ss_dssp             EECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSE
T ss_pred             EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCc
Confidence            34555666665555444  4459999986443 23467899999999999999999999873              4467


Q ss_pred             eeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEc-CCCCeeEecc
Q 039471          173 RTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD-HNFQPKISDF  251 (363)
Q Consensus       173 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~-~~~~~kl~Df  251 (363)
                      .++||||++ ++|.+++.       ...+++..++.++.|++.||+|||+   .+|+||||||+||+++ +++.+||+||
T Consensus        97 ~~lv~e~~~-~~L~~~~~-------~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~Df  165 (320)
T 2i6l_A           97 VYIVQEYME-TDLANVLE-------QGPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDF  165 (320)
T ss_dssp             EEEEEECCS-EEHHHHHT-------TCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred             eeEEeeccC-CCHHHHhh-------cCCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEccC
Confidence            899999997 59999983       2468999999999999999999999   9999999999999997 5678999999


Q ss_pred             ccceeccCCccc-cccccccccccccCCccc---------cCceehhHHHHHHhcCCCCCCcchhcccccchHH------
Q 039471          252 GLAKLCSKDISI-VSRTAARGTSGYIAPELF---------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPE------  315 (363)
Q Consensus       252 g~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~---------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~------  315 (363)
                      |+++........ .......+|..|+|||++         +|+||||+++|||++|+.||..............      
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  245 (320)
T 2i6l_A          166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH  245 (320)
T ss_dssp             TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCC
T ss_pred             ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence            999876533211 112334578899999976         7999999999999999999976543221000000      


Q ss_pred             -HHHHHhhhcc----ccccccCC----CCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          316 -WIYNRMRLGQ----ELCLDFEE----DGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       316 -~~~~~~~~~~----~~~~~~~~----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                       .....+....    ........    .....++..+.+++.+||+.||++|||++|
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  302 (320)
T 2i6l_A          246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEE  302 (320)
T ss_dssp             HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHH
Confidence             0000000000    00000000    011234678999999999999999999864


No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=8.7e-36  Score=291.56  Aligned_cols=247  Identities=22%  Similarity=0.269  Sum_probs=179.1

Q ss_pred             CcccccccccCCcceeecc--CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeee------CCceeEEE
Q 039471          108 PFQSLISFNLTNSKFFFLH--SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSE------GNRRTLIY  177 (363)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~~lv~  177 (363)
                      ....++.+++|.++.+...  ++.||||++....  ...+.+.+|++++++++|+||+++++++..      ++..++||
T Consensus        18 i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVm   97 (676)
T 3qa8_A           18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM   97 (676)
T ss_dssp             CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEE
Confidence            3344566666666554432  4459999987432  234578899999999999999999998755      67889999


Q ss_pred             eccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCC---eeEeccccc
Q 039471          178 EFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ---PKISDFGLA  254 (363)
Q Consensus       178 e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~---~kl~Dfg~a  254 (363)
                      ||+++++|.+++.....   ...+++..++.++.|++.||+|||+   .+|+||||||+||+++.++.   +||+|||.+
T Consensus        98 Ey~~ggsL~~~L~~~~~---~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a  171 (676)
T 3qa8_A           98 EYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA  171 (676)
T ss_dssp             ECCSSCBHHHHHHSSSC---TTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred             EeCCCCCHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEcccccc
Confidence            99999999999965332   2468999999999999999999999   99999999999999997665   899999999


Q ss_pred             eeccCCccccccccccccccccCCccc--------cCceehhHHHHHHhcCCCCCCcchhcccccc-hHHHHHHHhh---
Q 039471          255 KLCSKDISIVSRTAARGTSGYIAPELF--------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIY-FPEWIYNRMR---  322 (363)
Q Consensus       255 ~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~Di~slG~il~el~~g~~~~~~~~~~~~~~~-~~~~~~~~~~---  322 (363)
                      .........   ....||..|+|||++        +|+||||+++|||++|+.||........... ..........   
T Consensus       172 ~~~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~  248 (676)
T 3qa8_A          172 KELDQGELC---TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD  248 (676)
T ss_dssp             CBTTSCCCC---CCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred             ccccccccc---ccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence            887654332   445689999999998        7999999999999999999976422110000 0000000000   


Q ss_pred             --hccc-c--ccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          323 --LGQE-L--CLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       323 --~~~~-~--~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                        .+.. .  ...........+++.+.+++.+||++||++|||++|
T Consensus       249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e  294 (676)
T 3qa8_A          249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ  294 (676)
T ss_dssp             CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred             hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence              0000 0  001112244567889999999999999999999975


No 245
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=1.1e-35  Score=270.14  Aligned_cols=231  Identities=19%  Similarity=0.253  Sum_probs=161.1

Q ss_pred             ccccccccCCcceeecc--CCeeEEEEcccCCcCh---hHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCC
Q 039471          110 QSLISFNLTNSKFFFLH--SNEIAVKMLEHLKGNG---QEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGS  184 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  184 (363)
                      ..++.+++|.++.+...  ++.||||++.......   +.+.++..+++.++|+||+++++++.++...++||||+ ++.
T Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~  109 (318)
T 2dyl_A           31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTC  109 (318)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEE
T ss_pred             ceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCc
Confidence            34566666666665543  4559999997543222   23344455677889999999999999999999999999 456


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CceecCCCCCceEEcCCCCeeEeccccceeccCCccc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQ-RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI  263 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  263 (363)
                      +..+....     ...+++..+..++.|++.||.|||+   . +++|+||||+||+++.++.+||+|||++.........
T Consensus       110 ~~~l~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  181 (318)
T 2dyl_A          110 AEKLKKRM-----QGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK  181 (318)
T ss_dssp             HHHHHHHH-----TSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred             HHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccc
Confidence            65555322     2568999999999999999999998   6 9999999999999999999999999999776543322


Q ss_pred             cccccccccccccCCccc-------------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccc
Q 039471          264 VSRTAARGTSGYIAPELF-------------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLD  330 (363)
Q Consensus       264 ~~~~~~~gt~~y~aPE~~-------------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (363)
                         ....+|..|+|||++             +|+||||+++|||++|+.||........       .......+..... 
T Consensus       182 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------~~~~~~~~~~~~~-  250 (318)
T 2dyl_A          182 ---DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE-------VLTKVLQEEPPLL-  250 (318)
T ss_dssp             --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-------HHHHHHHSCCCCC-
T ss_pred             ---cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH-------HHHHHhccCCCCC-
Confidence               344589999999986             6999999999999999999975322111       1112221111111 


Q ss_pred             cCCCCcHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 039471          331 FEEDGDEGIARKLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       331 ~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                         .....++..+.+++.+||+.||++|||++|
T Consensus       251 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  280 (318)
T 2dyl_A          251 ---PGHMGFSGDFQSFVKDCLTKDHRKRPKYNK  280 (318)
T ss_dssp             ---CSSSCCCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred             ---CccCCCCHHHHHHHHHHccCChhHCcCHHH
Confidence               111235677999999999999999999753


No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=1.1e-35  Score=268.03  Aligned_cols=218  Identities=19%  Similarity=0.250  Sum_probs=160.8

Q ss_pred             ccccccCCcceeecc--CCeeEEEEcccCCcChhHHHHHHHHH-hccCCCceeeeeeeeee----CCceeEEEeccCCCC
Q 039471          112 LISFNLTNSKFFFLH--SNEIAVKMLEHLKGNGQEFINEVATI-GRIHHFHIVRLLGFCSE----GNRRTLIYEFMPNGS  184 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~~s  184 (363)
                      ++.+++|.++.+...  +..||||++..    ...+.+|+.++ +.++|+||+++++++..    +...++||||+++++
T Consensus        26 lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~  101 (299)
T 3m2w_A           26 LGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGE  101 (299)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCB
T ss_pred             cccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCc
Confidence            456666666555442  44599999863    45678899988 55589999999999876    678899999999999


Q ss_pred             HHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcC---CCCeeEeccccceeccCCc
Q 039471          185 LQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDH---NFQPKISDFGLAKLCSKDI  261 (363)
Q Consensus       185 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~---~~~~kl~Dfg~a~~~~~~~  261 (363)
                      |.+++.....    ..+++..++.++.|++.||+|||+   .+|+||||||+|||++.   ++.+||+|||++.......
T Consensus       102 L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~  174 (299)
T 3m2w_A          102 LFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEK  174 (299)
T ss_dssp             HHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTTCG
T ss_pred             HHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEecccccccccccc
Confidence            9999965432    469999999999999999999999   99999999999999998   7889999999997654321


Q ss_pred             cccccccccccccccCCccccCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHH
Q 039471          262 SIVSRTAARGTSGYIAPELFSRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIAR  341 (363)
Q Consensus       262 ~~~~~~~~~gt~~y~aPE~~~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (363)
                      .                ..-+|+||||+++|||++|+.||............    ...+..+   ...........+++
T Consensus       175 ~----------------~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~  231 (299)
T 3m2w_A          175 Y----------------DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM----KTRIRMG---QYEFPNPEWSEVSE  231 (299)
T ss_dssp             G----------------GGHHHHHHHHHHHHHHHHSSCSCCC-------CCS----CCSSCTT---CCSSCHHHHTTSCH
T ss_pred             C----------------CchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH----HHHHhhc---cccCCchhcccCCH
Confidence            1                01279999999999999999999765432210000    0000000   00000001123567


Q ss_pred             HHHHHHHHhccCCCCCCCCCCC
Q 039471          342 KLAIVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       342 ~l~~l~~~cl~~~p~~RPs~~e  363 (363)
                      ++.+++.+||+.||++|||++|
T Consensus       232 ~~~~li~~~l~~dP~~Rps~~e  253 (299)
T 3m2w_A          232 EVKMLIRNLLKTEPTQRMTITE  253 (299)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHHHHHHcccChhhCCCHHH
Confidence            8999999999999999999854


No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=3.9e-35  Score=292.91  Aligned_cols=213  Identities=19%  Similarity=0.212  Sum_probs=168.1

Q ss_pred             cccccccCCcceeecc---CCeeEEEEcccCC--cChhHHHHHHHHHhccCCCceeeeeeeeeeCCc-----eeEEEecc
Q 039471          111 SLISFNLTNSKFFFLH---SNEIAVKMLEHLK--GNGQEFINEVATIGRIHHFHIVRLLGFCSEGNR-----RTLIYEFM  180 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~---~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-----~~lv~e~~  180 (363)
                      .++.+++|.++.....   ++.||||++....  ...+.+.+|+.++++++|+||+++++++...+.     .++||||+
T Consensus        87 ~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~  166 (681)
T 2pzi_A           87 CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYV  166 (681)
T ss_dssp             EEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECC
T ss_pred             EEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeC
Confidence            3456666666655443   3459999986432  223578899999999999999999999987665     79999999


Q ss_pred             CCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCC
Q 039471          181 PNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD  260 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~  260 (363)
                      ++++|.+++.        ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.+ .+||+|||+++.....
T Consensus       167 ~g~~L~~~~~--------~~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~  234 (681)
T 2pzi_A          167 GGQSLKRSKG--------QKLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF  234 (681)
T ss_dssp             CCEECC------------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred             CCCcHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence            9999998772        368999999999999999999999   999999999999999986 8999999999876543


Q ss_pred             ccccccccccccccccCCccc-------cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCC
Q 039471          261 ISIVSRTAARGTSGYIAPELF-------SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEE  333 (363)
Q Consensus       261 ~~~~~~~~~~gt~~y~aPE~~-------~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (363)
                            ....||+.|+|||++       +||||||+++|||++|.+|+.........                     ..
T Consensus       235 ------~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~---------------------~~  287 (681)
T 2pzi_A          235 ------GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP---------------------ED  287 (681)
T ss_dssp             ------SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSSCC---------------------TT
T ss_pred             ------CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccccccc---------------------cc
Confidence                  334589999999987       89999999999999998887653211100                     00


Q ss_pred             CCcHHHHHHHHHHHHHhccCCCCCCCCCC
Q 039471          334 DGDEGIARKLAIVAIWCIQWNPTERPSMP  362 (363)
Q Consensus       334 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~  362 (363)
                      ......++.+.+++.+||+.||++||+..
T Consensus       288 ~~~~~~~~~l~~li~~~l~~dP~~R~~~~  316 (681)
T 2pzi_A          288 DPVLKTYDSYGRLLRRAIDPDPRQRFTTA  316 (681)
T ss_dssp             CHHHHHCHHHHHHHHHHTCSSGGGSCSSH
T ss_pred             ccccccCHHHHHHHhhhccCChhhCCCHH
Confidence            11123456799999999999999999753


No 248
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=7.6e-35  Score=260.85  Aligned_cols=210  Identities=14%  Similarity=0.015  Sum_probs=158.2

Q ss_pred             ccccccCCcceeecc--CCeeEEEEcccCCcCh----hHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          112 LISFNLTNSKFFFLH--SNEIAVKMLEHLKGNG----QEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       112 ~~~~~~~~~~~~~~~--~~~vAvK~~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ++.+++|.++.....  ++.||||++.......    +.+.+|+..+.+++|+||+++++++.+++..++||||+++++|
T Consensus        39 lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L  118 (286)
T 3uqc_A           39 HGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSL  118 (286)
T ss_dssp             EEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEH
T ss_pred             EcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCH
Confidence            456666666655544  4459999997554332    6789999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccc
Q 039471          186 QKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS  265 (363)
Q Consensus       186 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  265 (363)
                      .+++..        ......+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+++|..           
T Consensus       119 ~~~l~~--------~~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~~~-----------  176 (286)
T 3uqc_A          119 QEVADT--------SPSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPATM-----------  176 (286)
T ss_dssp             HHHHTT--------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCCCC-----------
T ss_pred             HHHHhc--------CCChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecccc-----------
Confidence            999931        23566788999999999999999   99999999999999999999999865432           


Q ss_pred             cccccccccccCCccc-cCceehhHHHHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHHHHH
Q 039471          266 RTAARGTSGYIAPELF-SRNFCYGMMLLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIARKLA  344 (363)
Q Consensus       266 ~~~~~gt~~y~aPE~~-~Di~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  344 (363)
                                 +|.-. +|+||||+++|||++|+.||............    ..... +..   .........+++.+.
T Consensus       177 -----------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~----~~~~~-~~~---~~~~~~~~~~~~~l~  237 (286)
T 3uqc_A          177 -----------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA----ERDTA-GQP---IEPADIDRDIPFQIS  237 (286)
T ss_dssp             -----------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC----CBCTT-SCB---CCHHHHCTTSCHHHH
T ss_pred             -----------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH----HHHhc-cCC---CChhhcccCCCHHHH
Confidence                       22222 79999999999999999999875442210000    00000 000   000011124567799


Q ss_pred             HHHHHhccCCCCCCCCCCC
Q 039471          345 IVAIWCIQWNPTERPSMPM  363 (363)
Q Consensus       345 ~l~~~cl~~~p~~RPs~~e  363 (363)
                      +++.+||+.||++| |++|
T Consensus       238 ~li~~~l~~dP~~R-s~~e  255 (286)
T 3uqc_A          238 AVAARSVQGDGGIR-SAST  255 (286)
T ss_dssp             HHHHHHHCTTSSCC-CHHH
T ss_pred             HHHHHHcccCCccC-CHHH
Confidence            99999999999999 8753


No 249
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=2e-35  Score=270.78  Aligned_cols=222  Identities=12%  Similarity=0.085  Sum_probs=163.3

Q ss_pred             cccccccccCCcceeeccCCeeEEEEcccCC---------cChhHHHHHHHHHhccC---------CCceee--------
Q 039471          109 FQSLISFNLTNSKFFFLHSNEIAVKMLEHLK---------GNGQEFINEVATIGRIH---------HFHIVR--------  162 (363)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~---------~~~~~~~~E~~~l~~l~---------h~niv~--------  162 (363)
                      ...++.+++|.++.+...++.||||++....         ...+.+.+|+.++++++         |+||++        
T Consensus        25 ~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~  104 (336)
T 2vuw_A           25 CEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQ  104 (336)
T ss_dssp             CEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEE
T ss_pred             eeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEec
Confidence            3456667777776666666679999997432         12378899999999886         555554        


Q ss_pred             ---------eeeeeee-------------CCceeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 039471          163 ---------LLGFCSE-------------GNRRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYL  220 (363)
Q Consensus       163 ---------~~~~~~~-------------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L  220 (363)
                               +++++.+             +...++||||+++|++.+.+..       ..+++..++.++.||+.||+||
T Consensus       105 ~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-------~~~~~~~~~~i~~qi~~aL~~l  177 (336)
T 2vuw_A          105 GSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-------KLSSLATAKSILHQLTASLAVA  177 (336)
T ss_dssp             SSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-------TCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-------cCCCHHHHHHHHHHHHHHHHHH
Confidence                     4444443             6789999999999977776621       4589999999999999999999


Q ss_pred             h-cCCCCCceecCCCCCceEEcCCC--------------------CeeEeccccceeccCCccccccccccccccccCCc
Q 039471          221 H-QGCNQRILHFDIKPHNILLDHNF--------------------QPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPE  279 (363)
Q Consensus       221 H-~~~~~~i~H~dikp~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE  279 (363)
                      | +   .+|+||||||+|||++.++                    .+||+|||+|+.....       ...||+.|+|||
T Consensus       178 H~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~aPE  247 (336)
T 2vuw_A          178 EAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMDED  247 (336)
T ss_dssp             HHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTCSG
T ss_pred             HHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccChh
Confidence            9 8   9999999999999999887                    8999999999877542       235899999999


Q ss_pred             cc-------cCceehhHH-HHHHhcCCCCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhc
Q 039471          280 LF-------SRNFCYGMM-LLEMVGCRKNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCI  351 (363)
Q Consensus       280 ~~-------~Di~slG~i-l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  351 (363)
                      ++       +||||+|++ .+++++|..||......       ....+.+.................+++++.+++.+||
T Consensus       248 ~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L  320 (336)
T 2vuw_A          248 LFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWL-------HYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTML  320 (336)
T ss_dssp             GGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHH-------HHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred             hhcCCCccceehhhhhCCCCcccccccCCCcchhhh-------hHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHh
Confidence            98       799998776 77788898887432100       0011111111111111122234578899999999999


Q ss_pred             cCC
Q 039471          352 QWN  354 (363)
Q Consensus       352 ~~~  354 (363)
                      +.|
T Consensus       321 ~~d  323 (336)
T 2vuw_A          321 NFS  323 (336)
T ss_dssp             GSS
T ss_pred             ccC
Confidence            976


No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=5.5e-34  Score=268.36  Aligned_cols=223  Identities=14%  Similarity=0.124  Sum_probs=160.2

Q ss_pred             cccccccCCcceeecc--CCeeEEEEcccCC----cChhHHHHHHHHHhccCC-Ccee---------------ee-----
Q 039471          111 SLISFNLTNSKFFFLH--SNEIAVKMLEHLK----GNGQEFINEVATIGRIHH-FHIV---------------RL-----  163 (363)
Q Consensus       111 ~~~~~~~~~~~~~~~~--~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~h-~niv---------------~~-----  163 (363)
                      .++.+++|.++.+...  ++.||||++....    ...+.+.+|+.+++.++| +|..               .+     
T Consensus        85 ~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (413)
T 3dzo_A           85 VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKK  164 (413)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---
T ss_pred             ccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCc
Confidence            4566667666666544  4559999987322    235789999999999976 2211               11     


Q ss_pred             -eeeeee-----CCceeEEEeccCCCCHHHHhhhcCC-CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCC
Q 039471          164 -LGFCSE-----GNRRTLIYEFMPNGSLQKFIFSKTN-SSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPH  236 (363)
Q Consensus       164 -~~~~~~-----~~~~~lv~e~~~~~sL~~~l~~~~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~  236 (363)
                       ..++..     ....+++|+++ +++|.+++..... ......+++..+..++.|++.||+|||+   .+|+||||||+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~iiHrDiKp~  240 (413)
T 3dzo_A          165 MIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRPV  240 (413)
T ss_dssp             ------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGG
T ss_pred             cccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcccc
Confidence             111111     22456777766 6799998843211 1123568889999999999999999999   99999999999


Q ss_pred             ceEEcCCCCeeEeccccceeccCCccccccccccccccccCCccc------------------cCceehhHHHHHHhcCC
Q 039471          237 NILLDHNFQPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPELF------------------SRNFCYGMMLLEMVGCR  298 (363)
Q Consensus       237 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~------------------~Di~slG~il~el~~g~  298 (363)
                      |||++.++.+||+|||+++.....     .....| ..|+|||++                  +|||||||++|||++|+
T Consensus       241 NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~  314 (413)
T 3dzo_A          241 DIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD  314 (413)
T ss_dssp             GEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSS
T ss_pred             eEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCC
Confidence            999999999999999999876543     134457 999999976                  59999999999999999


Q ss_pred             CCCCcchhcccccchHHHHHHHhhhccccccccCCCCcHHHHHHHHHHHHHhccCCCCCCCCCC
Q 039471          299 KNNDPAVEIQSQIYFPEWIYNRMRLGQELCLDFEEDGDEGIARKLAIVAIWCIQWNPTERPSMP  362 (363)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~  362 (363)
                      .||..........        .+       ..    ....+++.+.+++.+||+.||++|||+.
T Consensus       315 ~Pf~~~~~~~~~~--------~~-------~~----~~~~~~~~~~~li~~~l~~dP~~Rpt~~  359 (413)
T 3dzo_A          315 LPNTDDAALGGSE--------WI-------FR----SCKNIPQPVRALLEGFLRYPKEDRLLPL  359 (413)
T ss_dssp             CCCCTTGGGSCSG--------GG-------GS----SCCCCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CCCCCcchhhhHH--------HH-------Hh----hcccCCHHHHHHHHHHccCChhhCcCHH
Confidence            9997654322110        00       00    0112347799999999999999999964


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97  E-value=5.4e-32  Score=263.64  Aligned_cols=163  Identities=20%  Similarity=0.230  Sum_probs=127.0

Q ss_pred             eccCCeeEEEEcccCC-----------cChhHHHHHHHHHhcc-CCCceeeeeeeeeeCCceeEEEeccCCCCHHHHhhh
Q 039471          124 FLHSNEIAVKMLEHLK-----------GNGQEFINEVATIGRI-HHFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKFIFS  191 (363)
Q Consensus       124 ~~~~~~vAvK~~~~~~-----------~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~  191 (363)
                      ++-++.+|+|.+....           .+.++|.+|+++|+++ +|+||+++++++++++..||||||++|++|.++|..
T Consensus       256 ~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~  335 (569)
T 4azs_A          256 YFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAA  335 (569)
T ss_dssp             EEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHT
T ss_pred             ccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHh
Confidence            4456779999996432           2335799999999999 699999999999999999999999999999999953


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCccccccccccc
Q 039471          192 KTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTAARG  271 (363)
Q Consensus       192 ~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g  271 (363)
                            ...+++.   +|+.||+.||+|+|+   +||+||||||+|||++.++.+||+|||+|+....+...  .....|
T Consensus       336 ------~~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~--~~t~vG  401 (569)
T 4azs_A          336 ------GEEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW--PTNLVQ  401 (569)
T ss_dssp             ------TCCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CC--SHHHHH
T ss_pred             ------CCCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCCCCCcc--ccCcee
Confidence                  2456664   478999999999999   99999999999999999999999999999877654332  244679


Q ss_pred             cccccCCccc-------cCceehhHHHHHHhcCCCC
Q 039471          272 TSGYIAPELF-------SRNFCYGMMLLEMVGCRKN  300 (363)
Q Consensus       272 t~~y~aPE~~-------~Di~slG~il~el~~g~~~  300 (363)
                      |+.|+|||++       +|+||+|++++++.++..+
T Consensus       402 Tp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          402 SFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             HHHHHHHHHC-----------------CCCCTTHHH
T ss_pred             chhhccHHHhCCCCCCcccccccccchhhhccccch
Confidence            9999999998       7999999998887665443


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92  E-value=1.2e-25  Score=217.72  Aligned_cols=173  Identities=17%  Similarity=0.156  Sum_probs=133.7

Q ss_pred             ccccccccCCcceeeccCCeeEEEEcccCCcC---------hhHHHHHHHHHhccCCCceeeeeeeeeeCCceeEEEecc
Q 039471          110 QSLISFNLTNSKFFFLHSNEIAVKMLEHLKGN---------GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFM  180 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~vAvK~~~~~~~~---------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  180 (363)
                      ..++.+++|.++.....+..+++|+.......         .+++.+|++++++++|+||+++..++......++||||+
T Consensus       342 ~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~  421 (540)
T 3en9_A          342 HLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYI  421 (540)
T ss_dssp             ------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECC
T ss_pred             CEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECC
Confidence            35667777776666566777999986532211         245789999999999999997666666777889999999


Q ss_pred             CCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCC
Q 039471          181 PNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD  260 (363)
Q Consensus       181 ~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~  260 (363)
                      ++++|.+++..              +..++.|++.||+|||+   ++|+||||||+|||++.  .+||+|||+++.....
T Consensus       422 ~ggsL~~~l~~--------------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~  482 (540)
T 3en9_A          422 NGKLAKDVIED--------------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD  482 (540)
T ss_dssp             CSEEHHHHSTT--------------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred             CCCCHHHHHHH--------------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence            99999999932              56899999999999999   99999999999999999  9999999999987654


Q ss_pred             cccc-----ccccccccccccCCccc----------cCceehhHHHHHHhcCCCCC
Q 039471          261 ISIV-----SRTAARGTSGYIAPELF----------SRNFCYGMMLLEMVGCRKNN  301 (363)
Q Consensus       261 ~~~~-----~~~~~~gt~~y~aPE~~----------~Di~slG~il~el~~g~~~~  301 (363)
                      ....     ......||+.|+|||++          +|+||...-..+.+.++.++
T Consensus       483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            3211     11345689999999998          67888877777766555543


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.81  E-value=1.5e-20  Score=167.43  Aligned_cols=136  Identities=13%  Similarity=0.072  Sum_probs=104.2

Q ss_pred             ccccccccCCcceeecc-CCeeEEEEcccCCc-------------------ChhHHHHHHHHHhccCCCceeeeeeeeee
Q 039471          110 QSLISFNLTNSKFFFLH-SNEIAVKMLEHLKG-------------------NGQEFINEVATIGRIHHFHIVRLLGFCSE  169 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~~-~~~vAvK~~~~~~~-------------------~~~~~~~E~~~l~~l~h~niv~~~~~~~~  169 (363)
                      ..++.+++|.++.+... +..||||++.....                   ....+.+|+.++++++  | +++.+++..
T Consensus        96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~  172 (282)
T 1zar_A           96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW  172 (282)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE
T ss_pred             CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec
Confidence            44566666666655542 44599999963221                   1346889999999999  5 677776544


Q ss_pred             CCceeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEe
Q 039471          170 GNRRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKIS  249 (363)
Q Consensus       170 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~  249 (363)
                       +..++||||++|++|.+ +.          .  .....++.|++.||.|||+   .+|+||||||+|||++ ++.+||+
T Consensus       173 -~~~~lvmE~~~g~~L~~-l~----------~--~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~~~vkl~  234 (282)
T 1zar_A          173 -EGNAVLMELIDAKELYR-VR----------V--ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-EEGIWII  234 (282)
T ss_dssp             -ETTEEEEECCCCEEGGG-CC----------C--SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-TTEEEEC
T ss_pred             -cceEEEEEecCCCcHHH-cc----------h--hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-CCcEEEE
Confidence             56699999999999988 51          0  1245799999999999999   9999999999999999 9999999


Q ss_pred             ccccceeccCCccccccccccccccccCCccc
Q 039471          250 DFGLAKLCSKDISIVSRTAARGTSGYIAPELF  281 (363)
Q Consensus       250 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~  281 (363)
                      |||+|+.               +..+.|||.+
T Consensus       235 DFG~a~~---------------~~~~~a~e~l  251 (282)
T 1zar_A          235 DFPQSVE---------------VGEEGWREIL  251 (282)
T ss_dssp             CCTTCEE---------------TTSTTHHHHH
T ss_pred             ECCCCeE---------------CCCCCHHHHH
Confidence            9999863               3346778876


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73  E-value=4e-18  Score=149.77  Aligned_cols=131  Identities=17%  Similarity=0.128  Sum_probs=97.0

Q ss_pred             ccccccccCCcceeec--cCCe--eEEEEcccCCcC-------------------------hhHHHHHHHHHhccCCCce
Q 039471          110 QSLISFNLTNSKFFFL--HSNE--IAVKMLEHLKGN-------------------------GQEFINEVATIGRIHHFHI  160 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~--~~~~--vAvK~~~~~~~~-------------------------~~~~~~E~~~l~~l~h~ni  160 (363)
                      ..++.+++|.++.+..  .+..  ||||+.+.....                         ...+.+|+..+.+++|+++
T Consensus        53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i  132 (258)
T 1zth_A           53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGV  132 (258)
T ss_dssp             EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence            3456666666666655  4567  999987532111                         1267899999999988754


Q ss_pred             --eeeeeeeeeCCceeEEEeccCC-C----CHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhh-cCCCCCceecC
Q 039471          161 --VRLLGFCSEGNRRTLIYEFMPN-G----SLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLH-QGCNQRILHFD  232 (363)
Q Consensus       161 --v~~~~~~~~~~~~~lv~e~~~~-~----sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~i~H~d  232 (363)
                        ..+++.    ...++||||+.+ |    +|.++..         ..++..+..++.|++.||.||| +   .+|+|||
T Consensus       133 ~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~---------~~~~~~~~~i~~qi~~~l~~lH~~---~givHrD  196 (258)
T 1zth_A          133 SVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGR---------ELKELDVEGIFNDVVENVKRLYQE---AELVHAD  196 (258)
T ss_dssp             CCCCEEEE----ETTEEEEECCEETTEECCBHHHHGG---------GGGGSCHHHHHHHHHHHHHHHHHT---SCEECSS
T ss_pred             CCCeEEEc----CCCEEEEEecCCCCCccccHHHHhh---------ccChHHHHHHHHHHHHHHHHHHHH---CCEEeCC
Confidence              344432    356899999942 3    7776652         1234567889999999999999 8   9999999


Q ss_pred             CCCCceEEcCCCCeeEeccccceecc
Q 039471          233 IKPHNILLDHNFQPKISDFGLAKLCS  258 (363)
Q Consensus       233 ikp~Nill~~~~~~kl~Dfg~a~~~~  258 (363)
                      |||+|||++.  .++|+|||+|....
T Consensus       197 lkp~NILl~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          197 LSEYNIMYID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             CSTTSEEESS--SEEECCCTTCEETT
T ss_pred             CCHHHEEEcC--cEEEEECcccccCC
Confidence            9999999998  89999999997653


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.50  E-value=7.9e-15  Score=134.33  Aligned_cols=130  Identities=12%  Similarity=0.088  Sum_probs=85.2

Q ss_pred             ccccccccCCcceeec-cCCeeEEEEcccCCc---------------ChhHH--------HHHHHHHhccCCCcee--ee
Q 039471          110 QSLISFNLTNSKFFFL-HSNEIAVKMLEHLKG---------------NGQEF--------INEVATIGRIHHFHIV--RL  163 (363)
Q Consensus       110 ~~~~~~~~~~~~~~~~-~~~~vAvK~~~~~~~---------------~~~~~--------~~E~~~l~~l~h~niv--~~  163 (363)
                      ..++.|+++.++.+.. .++.||||+++....               .....        .+|...|.++.+.++.  ..
T Consensus       101 ~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~p  180 (397)
T 4gyi_A          101 SRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPEP  180 (397)
T ss_dssp             EEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCE
T ss_pred             CEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCee
Confidence            3455555555555443 344599998753210               01112        2455555555443332  22


Q ss_pred             eeeeeeCCceeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCC
Q 039471          164 LGFCSEGNRRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHN  243 (363)
Q Consensus       164 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~  243 (363)
                      ++.    ...+|||||++|++|.++..          .  +....++.|++.+|.+||+   .+|+||||||.|||++++
T Consensus       181 ~~~----~~~~LVME~i~G~~L~~l~~----------~--~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~d  241 (397)
T 4gyi_A          181 IAQ----SRHTIVMSLVDALPMRQVSS----------V--PDPASLYADLIALILRLAK---HGLIHGDFNEFNILIREE  241 (397)
T ss_dssp             EEE----ETTEEEEECCSCEEGGGCCC----------C--SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEE
T ss_pred             eec----cCceEEEEecCCccHhhhcc----------c--HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCC
Confidence            221    23479999999988866541          1  1245678999999999999   999999999999999877


Q ss_pred             C----------CeeEeccccceecc
Q 039471          244 F----------QPKISDFGLAKLCS  258 (363)
Q Consensus       244 ~----------~~kl~Dfg~a~~~~  258 (363)
                      +          .+.|+||+-+....
T Consensus       242 gd~~d~~~~~~~~~iID~~Q~V~~~  266 (397)
T 4gyi_A          242 KDAEDPSSITLTPIIIXFPQMVSMD  266 (397)
T ss_dssp             ECSSCTTSEEEEEEECCCTTCEETT
T ss_pred             CCcccccccccceEEEEeCCcccCC
Confidence            6          38999999876543


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23  E-value=3.3e-11  Score=105.58  Aligned_cols=120  Identities=14%  Similarity=0.092  Sum_probs=93.0

Q ss_pred             cCCeeEEEEcccCC-cChhHHHHHHHHHhccC-CCceeeeeeeeeeCCceeEEEeccCCCCHHHHhhhcCCCCCCCCCCH
Q 039471          126 HSNEIAVKMLEHLK-GNGQEFINEVATIGRIH-HFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSW  203 (363)
Q Consensus       126 ~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~  203 (363)
                      .+..+++|+..... .....+.+|+++++.+. +.++.++++++...+..++||||++|.+|.+.+.           +.
T Consensus        36 ~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~-----------~~  104 (263)
T 3tm0_A           36 ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE-----------DE  104 (263)
T ss_dssp             SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC-----------TT
T ss_pred             CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccC-----------Cc
Confidence            45569999986421 23456889999999885 6778899999998889999999999999987641           11


Q ss_pred             HHHHHHHHHHHHHHHHhhcCC--------------------------------------------------------CCC
Q 039471          204 EKLRKIAFGVARGVEYLHQGC--------------------------------------------------------NQR  227 (363)
Q Consensus       204 ~~~~~i~~~i~~~l~~LH~~~--------------------------------------------------------~~~  227 (363)
                      .....++.+++.+|..||+-.                                                        ...
T Consensus       105 ~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  184 (263)
T 3tm0_A          105 QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELV  184 (263)
T ss_dssp             TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEE
T ss_pred             ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCce
Confidence            223467889999999999711                                                        145


Q ss_pred             ceecCCCCCceEEcCCCCeeEecccccee
Q 039471          228 ILHFDIKPHNILLDHNFQPKISDFGLAKL  256 (363)
Q Consensus       228 i~H~dikp~Nill~~~~~~kl~Dfg~a~~  256 (363)
                      ++|+|++|.||+++.+..+.|+||+.+..
T Consensus       185 l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          185 FSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             EECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EECCCCCcCcEEEECCcEEEEEEchhccc
Confidence            89999999999998765567999998754


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.13  E-value=2.2e-10  Score=99.98  Aligned_cols=114  Identities=18%  Similarity=0.116  Sum_probs=84.3

Q ss_pred             CeeEEEEcccCCcChhHHHHHHHHHhccCCCc--eeeeeeeeeeCCceeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHH
Q 039471          128 NEIAVKMLEHLKGNGQEFINEVATIGRIHHFH--IVRLLGFCSEGNRRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEK  205 (363)
Q Consensus       128 ~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~  205 (363)
                      ..+++|+....  ....+.+|+++++.+++.+  +.+++++...++..++||||++|.+|.  ..         ..+   
T Consensus        45 ~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~---------~~~---  108 (264)
T 1nd4_A           45 PVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SS---------HLA---  108 (264)
T ss_dssp             CCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TS---------CCC---
T ss_pred             CeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cC---------cCC---
Confidence            34999997643  3356789999999886444  566888888878899999999998884  31         111   


Q ss_pred             HHHHHHHHHHHHHHhhcCC-------------------------------------------------------CCCcee
Q 039471          206 LRKIAFGVARGVEYLHQGC-------------------------------------------------------NQRILH  230 (363)
Q Consensus       206 ~~~i~~~i~~~l~~LH~~~-------------------------------------------------------~~~i~H  230 (363)
                      ...++.+++..|..||+..                                                       ...++|
T Consensus       109 ~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~H  188 (264)
T 1nd4_A          109 PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTH  188 (264)
T ss_dssp             HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEEC
T ss_pred             HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEEC
Confidence            1256677777788888621                                                       112999


Q ss_pred             cCCCCCceEEcCCCCeeEeccccceec
Q 039471          231 FDIKPHNILLDHNFQPKISDFGLAKLC  257 (363)
Q Consensus       231 ~dikp~Nill~~~~~~kl~Dfg~a~~~  257 (363)
                      +|++|.||+++.++.+.|+||+.+...
T Consensus       189 gDl~~~Nil~~~~~~~~liD~~~a~~g  215 (264)
T 1nd4_A          189 GDACLPNIMVENGRFSGFIDCGRLGVA  215 (264)
T ss_dssp             SSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred             CCCCCCcEEEECCcEEEEEcchhcccC
Confidence            999999999987766779999987643


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.05  E-value=8.6e-10  Score=101.21  Aligned_cols=130  Identities=15%  Similarity=0.170  Sum_probs=95.8

Q ss_pred             ceeeccCCeeEEEEcc--cCC--cChhHHHHHHHHHhccC--CCceeeeeeeeeeC---CceeEEEeccCCCCHHHHhhh
Q 039471          121 KFFFLHSNEIAVKMLE--HLK--GNGQEFINEVATIGRIH--HFHIVRLLGFCSEG---NRRTLIYEFMPNGSLQKFIFS  191 (363)
Q Consensus       121 ~~~~~~~~~vAvK~~~--~~~--~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~---~~~~lv~e~~~~~sL~~~l~~  191 (363)
                      +.+...+..+++|+..  ...  .....+.+|.++++.++  +.++.++++++.+.   +..++||||++|.++.+..  
T Consensus        55 y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~--  132 (359)
T 3dxp_A           55 FKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQS--  132 (359)
T ss_dssp             EEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTT--
T ss_pred             EEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCc--
Confidence            3344445568888876  332  22357789999999987  45688899988776   4589999999998775422  


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-----------------------------------------------
Q 039471          192 KTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGC-----------------------------------------------  224 (363)
Q Consensus       192 ~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----------------------------------------------  224 (363)
                            ...++......++.++++.|..||+..                                               
T Consensus       133 ------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  206 (359)
T 3dxp_A          133 ------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQ  206 (359)
T ss_dssp             ------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGG
T ss_pred             ------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHh
Confidence                  134778888999999999999999721                                               


Q ss_pred             --------CCCceecCCCCCceEEcCCCC--eeEeccccceecc
Q 039471          225 --------NQRILHFDIKPHNILLDHNFQ--PKISDFGLAKLCS  258 (363)
Q Consensus       225 --------~~~i~H~dikp~Nill~~~~~--~kl~Dfg~a~~~~  258 (363)
                              ...++|+|++|.|||++.++.  +.|+||+.+..-.
T Consensus       207 ~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~  250 (359)
T 3dxp_A          207 HIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGH  250 (359)
T ss_dssp             CCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEEC
T ss_pred             cCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCC
Confidence                    257999999999999997653  6899999887643


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.94  E-value=5.8e-10  Score=99.94  Aligned_cols=177  Identities=18%  Similarity=0.183  Sum_probs=115.1

Q ss_pred             ccCCcceeeccCCeeEEEEcccCCcChhHHHHHHHHHhccC-CC--ceeeeeeeeeeCC---ceeEEEeccCCCCHHHHh
Q 039471          116 NLTNSKFFFLHSNEIAVKMLEHLKGNGQEFINEVATIGRIH-HF--HIVRLLGFCSEGN---RRTLIYEFMPNGSLQKFI  189 (363)
Q Consensus       116 ~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~-h~--niv~~~~~~~~~~---~~~lv~e~~~~~sL~~~l  189 (363)
                      +.|....++.-++.+++|+.... .....+.+|.++++.+. +.  .+.+++.......   ..|+|||+++|.+|....
T Consensus        29 ~~G~~n~v~~v~~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~  107 (304)
T 3sg8_A           29 GEGNDCIAYEINRDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLL  107 (304)
T ss_dssp             EECSSEEEEESTTSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHH
T ss_pred             CCCCcceEEEECCEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCccc
Confidence            34444455555567999986532 23467889999998874 32  2445555543332   458899999998887543


Q ss_pred             hhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC---------------------------------------------
Q 039471          190 FSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGC---------------------------------------------  224 (363)
Q Consensus       190 ~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------------------  224 (363)
                      .        ..++..+...++.+++..+..||+..                                             
T Consensus       108 ~--------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  179 (304)
T 3sg8_A          108 L--------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRD  179 (304)
T ss_dssp             H--------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred             c--------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHH
Confidence            1        34677777888888888888888511                                             


Q ss_pred             ----------CCCceecCCCCCceEEcC--CCCeeEeccccceeccCCcccccccc------------ccccccccC-Cc
Q 039471          225 ----------NQRILHFDIKPHNILLDH--NFQPKISDFGLAKLCSKDISIVSRTA------------ARGTSGYIA-PE  279 (363)
Q Consensus       225 ----------~~~i~H~dikp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~------------~~gt~~y~a-PE  279 (363)
                                ...++|+|++|.||+++.  ...+.|+||+.+..-...........            .....+... |+
T Consensus       180 ~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~  259 (304)
T 3sg8_A          180 ILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPT  259 (304)
T ss_dssp             HHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHH
T ss_pred             HHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHH
Confidence                      135799999999999998  45678999998876543211100000            001112233 44


Q ss_pred             cc------cCceehhHHHHHHhcCCCCC
Q 039471          280 LF------SRNFCYGMMLLEMVGCRKNN  301 (363)
Q Consensus       280 ~~------~Di~slG~il~el~~g~~~~  301 (363)
                      ..      .+.|++|.+++.+.+|..++
T Consensus       260 ~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          260 VLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence            33      57799999999999998664


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.63  E-value=1.2e-07  Score=85.45  Aligned_cols=132  Identities=16%  Similarity=0.165  Sum_probs=91.7

Q ss_pred             cccCCcceeeccCCeeEEEEcccCCcChhHHHHHHHHHhccCC----CceeeeeeeeeeCCceeEEEeccCCCCHHHHhh
Q 039471          115 FNLTNSKFFFLHSNEIAVKMLEHLKGNGQEFINEVATIGRIHH----FHIVRLLGFCSEGNRRTLIYEFMPNGSLQKFIF  190 (363)
Q Consensus       115 ~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~  190 (363)
                      ++.|....++.-++.+++|+..... ....+.+|.++++.+.+    ..+.+++++    +..++||||++|.++.....
T Consensus        45 l~~G~~n~vy~vg~~~vlR~~~~~~-~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~l~~~~~  119 (320)
T 3r70_A           45 LSSGDDSDTFLCNEQYVVKVPKRDS-VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGERITYEQY  119 (320)
T ss_dssp             EEECSSEEEEEETTTEEEEEESSHH-HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBCCCHHHH
T ss_pred             CCCCCCceEEEECCEEEEEeCCcHH-HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcccccccc
Confidence            3344444444446778999764221 23468899999888865    234555555    56789999999988864321


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC---------------------------------------------
Q 039471          191 SKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCN---------------------------------------------  225 (363)
Q Consensus       191 ~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~---------------------------------------------  225 (363)
                              ..++......++.+++..|..||+...                                             
T Consensus       120 --------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (320)
T 3r70_A          120 --------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIET  191 (320)
T ss_dssp             --------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred             --------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHHH
Confidence                    346677777788888888888885221                                             


Q ss_pred             ---------------CCceecCCCCCceEEcCCCCeeEeccccceeccC
Q 039471          226 ---------------QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSK  259 (363)
Q Consensus       226 ---------------~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~  259 (363)
                                     ..++|+|++|.||+++.+..+.|+||+.+..-..
T Consensus       192 ~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~  240 (320)
T 3r70_A          192 IYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDP  240 (320)
T ss_dssp             HHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECG
T ss_pred             HHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCH
Confidence                           2349999999999999866679999999876543


No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.47  E-value=8e-07  Score=79.47  Aligned_cols=128  Identities=16%  Similarity=0.178  Sum_probs=85.4

Q ss_pred             eeeccCCeeEEEEcccCCcChhHHHHHHHHHhccCCC---ceeeeeeeee-eCCceeEEEeccCCCCHHHHhhhcCCCCC
Q 039471          122 FFFLHSNEIAVKMLEHLKGNGQEFINEVATIGRIHHF---HIVRLLGFCS-EGNRRTLIYEFMPNGSLQKFIFSKTNSSS  197 (363)
Q Consensus       122 ~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~~~~~~~  197 (363)
                      .++.-+..+++|+.. .......+.+|.++|+.+.+.   .+.+.+.+.. ..+..+++||+++|.+|.+...       
T Consensus        34 ~v~~vg~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~~~~-------  105 (306)
T 3tdw_A           34 YAILVNGDWVFRFPK-SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDGM-------  105 (306)
T ss_dssp             EEEEETTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHHHHH-------
T ss_pred             eEEEECCEEEEEecC-CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECchhhh-------
Confidence            333336678999853 222345788999999998742   3566666664 4456789999999988876321       


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------------------
Q 039471          198 HRQLSWEKLRKIAFGVARGVEYLHQG------------------------------------------------------  223 (363)
Q Consensus       198 ~~~l~~~~~~~i~~~i~~~l~~LH~~------------------------------------------------------  223 (363)
                       ..++......++.++.+.|..||+-                                                      
T Consensus       106 -~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~  184 (306)
T 3tdw_A          106 -AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPV  184 (306)
T ss_dssp             -TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHH
T ss_pred             -hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcc
Confidence             2234455555555555555555541                                                      


Q ss_pred             ---CCCCceecCCCCCceEEcC---CCCe-eEeccccceecc
Q 039471          224 ---CNQRILHFDIKPHNILLDH---NFQP-KISDFGLAKLCS  258 (363)
Q Consensus       224 ---~~~~i~H~dikp~Nill~~---~~~~-kl~Dfg~a~~~~  258 (363)
                         ....++|+|++|.||+++.   ++.+ .|+||+.+..-.
T Consensus       185 ~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd  226 (306)
T 3tdw_A          185 YTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD  226 (306)
T ss_dssp             HHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred             cccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence               1235699999999999987   4554 899999887643


No 262
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.33  E-value=2e-06  Score=75.19  Aligned_cols=117  Identities=14%  Similarity=0.124  Sum_probs=84.7

Q ss_pred             eeEEEEcccCCcChhHHHHHHHHHhccC-CCceeeeeeeeeeCCceeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHH
Q 039471          129 EIAVKMLEHLKGNGQEFINEVATIGRIH-HFHIVRLLGFCSEGNRRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLR  207 (363)
Q Consensus       129 ~vAvK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~  207 (363)
                      .+.+|+-...  ....+.+|...|+.+. +-.+.++++++.+.+..++|||+++|.++.+.....          .....
T Consensus        52 ~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~----------~~~~~  119 (272)
T 4gkh_A           52 ELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEY----------PDSGE  119 (272)
T ss_dssp             CEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHHC----------GGGHH
T ss_pred             EEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccCC----------HHHHH
Confidence            4888986522  3456788999998885 445778899999989999999999998887765211          11223


Q ss_pred             HHHHHHHHHHHHhhcCC-------------------------------------------------------CCCceecC
Q 039471          208 KIAFGVARGVEYLHQGC-------------------------------------------------------NQRILHFD  232 (363)
Q Consensus       208 ~i~~~i~~~l~~LH~~~-------------------------------------------------------~~~i~H~d  232 (363)
                      .+..+++..|.-||+..                                                       ...++|+|
T Consensus       120 ~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGD  199 (272)
T 4gkh_A          120 NIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGD  199 (272)
T ss_dssp             HHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSC
T ss_pred             HHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCC
Confidence            45556666666666410                                                       12368999


Q ss_pred             CCCCceEEcCCCCeeEeccccceec
Q 039471          233 IKPHNILLDHNFQPKISDFGLAKLC  257 (363)
Q Consensus       233 ikp~Nill~~~~~~kl~Dfg~a~~~  257 (363)
                      +.+.|||++.++.+-|+||+.+..-
T Consensus       200 l~~~Nil~~~~~~~~viDwe~a~~g  224 (272)
T 4gkh_A          200 FSLDNLIFDEGKLIGCIDVGRVGIA  224 (272)
T ss_dssp             CCTTSEEEETTEEEEECCCTTCEEE
T ss_pred             CCCCeEEEECCeEEEEEECcccccC
Confidence            9999999998777789999987653


No 263
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.09  E-value=7.2e-06  Score=75.02  Aligned_cols=57  Identities=11%  Similarity=0.029  Sum_probs=41.3

Q ss_pred             cCCeeEEEEcccCCcChhHHHHHHHHHhccCCC--ceeeeeeeeeeC-CceeEEEeccCCCCHH
Q 039471          126 HSNEIAVKMLEHLKGNGQEFINEVATIGRIHHF--HIVRLLGFCSEG-NRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       126 ~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~-~~~~lv~e~~~~~sL~  186 (363)
                      .+..+++|+...    ...+..|..+++.+...  .+.++++++... +..++||||++|.++.
T Consensus        63 ~g~~~vlK~~~~----~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l~  122 (362)
T 3ovc_A           63 GGRGYVLRVNSC----ADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQ  122 (362)
T ss_dssp             TTEEEEEEEESC----CHHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEETT
T ss_pred             CCcEEEEEeCCc----hhhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCcc
Confidence            355688888752    23688999999988643  356777776654 6789999999986664


No 264
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.05  E-value=1.1e-05  Score=73.45  Aligned_cols=59  Identities=5%  Similarity=0.087  Sum_probs=41.3

Q ss_pred             CeeEEEEcccCC---c-ChhHHHHHHHHHhccCC---CceeeeeeeeeeC---CceeEEEeccCCCCHH
Q 039471          128 NEIAVKMLEHLK---G-NGQEFINEVATIGRIHH---FHIVRLLGFCSEG---NRRTLIYEFMPNGSLQ  186 (363)
Q Consensus       128 ~~vAvK~~~~~~---~-~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~---~~~~lv~e~~~~~sL~  186 (363)
                      ..+++|+.....   . ....+.+|+++++.+..   ..+.++++++.+.   +..++|||+++|.++.
T Consensus        53 ~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A           53 QKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             EEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCC
T ss_pred             ceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChh
Confidence            458888765332   1 23567889999988853   3577888887655   3568999999987664


No 265
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.76  E-value=0.00022  Score=64.20  Aligned_cols=32  Identities=25%  Similarity=0.257  Sum_probs=28.6

Q ss_pred             CCCceecCCCCCceEEcCCCCeeEecccccee
Q 039471          225 NQRILHFDIKPHNILLDHNFQPKISDFGLAKL  256 (363)
Q Consensus       225 ~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~  256 (363)
                      ...++|+|+.+.|||++.++.+.|+||+.+..
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            37899999999999998888899999998754


No 266
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.65  E-value=0.00032  Score=61.86  Aligned_cols=55  Identities=18%  Similarity=0.192  Sum_probs=41.4

Q ss_pred             CCeeEEEEcccC-CcChhHHHHHHHHHhccCCC---ceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          127 SNEIAVKMLEHL-KGNGQEFINEVATIGRIHHF---HIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       127 ~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      +..++||+.... ......|..|++.|+.+++.   .+.+++++.    ..++||||++++++
T Consensus        39 G~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~~   97 (288)
T 3d1u_A           39 GTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERPP   97 (288)
T ss_dssp             SCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCCC
T ss_pred             CCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCCC
Confidence            456999997533 22346789999999999865   577787763    36899999998875


No 267
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.46  E-value=0.00045  Score=61.17  Aligned_cols=32  Identities=22%  Similarity=0.161  Sum_probs=26.6

Q ss_pred             CCceecCCCCCceEEcCCCCeeEeccccceecc
Q 039471          226 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCS  258 (363)
Q Consensus       226 ~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~  258 (363)
                      ..++|+|+.+.||+ ..++.+.++||..+..-+
T Consensus       173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g~  204 (301)
T 3dxq_A          173 LAACHCDPLCENFL-DTGERMWIVDWEYSGMND  204 (301)
T ss_dssp             CEEECSCCCGGGEE-ECSSCEEECCCTTCEEEC
T ss_pred             ceeeccCCCcCCEE-ECCCCEEEEecccccCCC
Confidence            56899999999999 556678999999876543


No 268
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.32  E-value=0.0012  Score=58.86  Aligned_cols=62  Identities=13%  Similarity=0.147  Sum_probs=46.7

Q ss_pred             eeeccCCeeEEEEcccCCcChhHHHHHHHHHhccC---CCceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          122 FFFLHSNEIAVKMLEHLKGNGQEFINEVATIGRIH---HFHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       122 ~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      .+...+..+++|+....  ....+..|.+.|+.+.   ...+.+++++....+..++||||+++.++
T Consensus        54 ~v~~~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           54 LINDEVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             EEESSSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             EEEECCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence            33344556899987633  3467889999998884   35688899888877889999999998764


No 269
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.31  E-value=0.00092  Score=61.20  Aligned_cols=124  Identities=15%  Similarity=0.191  Sum_probs=75.0

Q ss_pred             CeeEEEEcccCCcChhHHHHHHHHHhccCCC-ceeeeeeeeeeCCceeEEEeccCCCCHHHH-----------------h
Q 039471          128 NEIAVKMLEHLKGNGQEFINEVATIGRIHHF-HIVRLLGFCSEGNRRTLIYEFMPNGSLQKF-----------------I  189 (363)
Q Consensus       128 ~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~~~~~sL~~~-----------------l  189 (363)
                      ..+.+|+............+|.++++.+... -..++++.+.++    +||||++|.+|..-                 +
T Consensus        83 ~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g----~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~L  158 (379)
T 3feg_A           83 REVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPEG----RLEQYIPSRPLKTQELREPVLSAAIATKMAQF  158 (379)
T ss_dssp             SEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTE----EEEECCSEEECCGGGGGCHHHHHHHHHHHHHH
T ss_pred             CeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCCc----cEEEEecCccCChhHhCCHHHHHHHHHHHHHH
Confidence            4588888643333456677999999888522 235667666542    89999998665311                 1


Q ss_pred             hhcCCCCCCCCC--CHHHHHHHHHHHHH-------------------HHHHhh----c-CCCCCceecCCCCCceEEcCC
Q 039471          190 FSKTNSSSHRQL--SWEKLRKIAFGVAR-------------------GVEYLH----Q-GCNQRILHFDIKPHNILLDHN  243 (363)
Q Consensus       190 ~~~~~~~~~~~l--~~~~~~~i~~~i~~-------------------~l~~LH----~-~~~~~i~H~dikp~Nill~~~  243 (363)
                      +...... .+..  -+.++.++..++..                   .++.|.    . .....++|+|+.+.||+++.+
T Consensus       159 H~~~~~~-~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~  237 (379)
T 3feg_A          159 HGMEMPF-TKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSE  237 (379)
T ss_dssp             HTCCCSS-CCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESC
T ss_pred             hCCCCCC-CCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCC
Confidence            1111101 1112  24566666654422                   123332    1 223578999999999999876


Q ss_pred             ----CCeeEecccccee
Q 039471          244 ----FQPKISDFGLAKL  256 (363)
Q Consensus       244 ----~~~kl~Dfg~a~~  256 (363)
                          +.+.++||..+..
T Consensus       238 ~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          238 PENADSLMLVDFEYSSY  254 (379)
T ss_dssp             C---CCEEECCCTTCEE
T ss_pred             CCccCcEEEEecccCCc
Confidence                6899999998764


No 270
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.26  E-value=0.00044  Score=63.80  Aligned_cols=32  Identities=19%  Similarity=0.297  Sum_probs=27.1

Q ss_pred             CCceecCCCCCceEEcCCCCeeEeccccceecc
Q 039471          226 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCS  258 (363)
Q Consensus       226 ~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~  258 (363)
                      ..++|+|+.|.||+++.+ .++++||..+..-+
T Consensus       227 ~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~G~  258 (397)
T 2olc_A          227 ETLIHGDLHTGSIFASEH-ETKVIDPEFAFYGP  258 (397)
T ss_dssp             CEEECSCCSGGGEEECSS-CEEECCCTTCEEEC
T ss_pred             CceeeCCCCcCcEEEeCC-CeEEEeCcccccCC
Confidence            689999999999999876 48999998776543


No 271
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.82  E-value=0.0074  Score=56.01  Aligned_cols=32  Identities=13%  Similarity=0.269  Sum_probs=28.5

Q ss_pred             CCceecCCCCCceEEcCCCCeeEeccccceecc
Q 039471          226 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCS  258 (363)
Q Consensus       226 ~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~  258 (363)
                      ..++|+|++|.|||++.++ ++++||+.+..-+
T Consensus       232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~  263 (420)
T 2pyw_A          232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGP  263 (420)
T ss_dssp             CEEECSCCSGGGEEECSSC-EEECCCTTCEEEC
T ss_pred             CeEEecCCCCCcEEEeCCC-CEEEeCcccccCc
Confidence            7899999999999999876 9999999887644


No 272
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.79  E-value=0.012  Score=52.74  Aligned_cols=34  Identities=26%  Similarity=0.301  Sum_probs=29.1

Q ss_pred             CCceecCCCCCceEEcCC----CCeeEeccccceeccC
Q 039471          226 QRILHFDIKPHNILLDHN----FQPKISDFGLAKLCSK  259 (363)
Q Consensus       226 ~~i~H~dikp~Nill~~~----~~~kl~Dfg~a~~~~~  259 (363)
                      ..++|+|+.+.||+++.+    +.+.|+||+.+..-+.
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~  220 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR  220 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence            689999999999999874    6789999998876544


No 273
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.76  E-value=0.0023  Score=53.19  Aligned_cols=96  Identities=9%  Similarity=0.052  Sum_probs=61.3

Q ss_pred             CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccceeccCCcc
Q 039471          183 GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS  262 (363)
Q Consensus       183 ~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~  262 (363)
                      -||.+++....     .+++++++|.++.|.+.+|.-+-.+  ..-..+=+.|..|++..+|++-+.+ +.+.       
T Consensus        33 vSL~eIL~~~~-----~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~-------   97 (229)
T 2yle_A           33 LSLEEILRLYN-----QPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD-------   97 (229)
T ss_dssp             EEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C----------
T ss_pred             ccHHHHHHHcC-----CCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc-------
Confidence            48999996544     7899999999999999998776210  1111333467899999999887764 1111       


Q ss_pred             ccccccccccccccCCccc-------cCceehhHHHHHHhcCCCC
Q 039471          263 IVSRTAARGTSGYIAPELF-------SRNFCYGMMLLEMVGCRKN  300 (363)
Q Consensus       263 ~~~~~~~~gt~~y~aPE~~-------~Di~slG~il~el~~g~~~  300 (363)
                             .....+.+||..       .=|||+|+++|..+.-..+
T Consensus        98 -------~~~~~~~~pe~~~~~~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A           98 -------AGEPPPVAGKLGYSQCMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             ----------------CCSSSSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             -------ccccCCCChhhccccchHHHHHHHHHHHHHHHhhcCCC
Confidence                   011234566653       2479999999998854444


No 274
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.71  E-value=0.0035  Score=55.79  Aligned_cols=129  Identities=13%  Similarity=0.159  Sum_probs=69.7

Q ss_pred             CCeeEEEEcccCCcChhHHHHHHHHHhccCCCc--eeeeeee------eeeCCceeEEEeccCCCCHHH-----------
Q 039471          127 SNEIAVKMLEHLKGNGQEFINEVATIGRIHHFH--IVRLLGF------CSEGNRRTLIYEFMPNGSLQK-----------  187 (363)
Q Consensus       127 ~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~------~~~~~~~~lv~e~~~~~sL~~-----------  187 (363)
                      +..+++|+.... ...+++..|+.++..+...+  +.+++..      ....+..+++++|++|.++..           
T Consensus        45 ~g~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~  123 (322)
T 2ppq_A           45 KDPLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGK  123 (322)
T ss_dssp             SCCEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHH
T ss_pred             CccEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHH
Confidence            345888987642 23346667888888775322  3444422      123456789999998865321           


Q ss_pred             ---HhhhcCCCCCCC---CC---CHHHHHH------------HHHHHHHHHHHhhc----CCCCCceecCCCCCceEEcC
Q 039471          188 ---FIFSKTNSSSHR---QL---SWEKLRK------------IAFGVARGVEYLHQ----GCNQRILHFDIKPHNILLDH  242 (363)
Q Consensus       188 ---~l~~~~~~~~~~---~l---~~~~~~~------------i~~~i~~~l~~LH~----~~~~~i~H~dikp~Nill~~  242 (363)
                         .++.....-...   ..   .|.....            +...+...++.+.+    .....++|+|+.+.|||++.
T Consensus       124 ~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~  203 (322)
T 2ppq_A          124 ALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLG  203 (322)
T ss_dssp             HHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEET
T ss_pred             HHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeC
Confidence               112111000000   01   1111000            00113344455542    11357999999999999998


Q ss_pred             CCCeeEecccccee
Q 039471          243 NFQPKISDFGLAKL  256 (363)
Q Consensus       243 ~~~~kl~Dfg~a~~  256 (363)
                      +..+.++||+.+..
T Consensus       204 ~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          204 DELSGLIDFYFACN  217 (322)
T ss_dssp             TEEEEECCCTTCEE
T ss_pred             CceEEEecchhccC
Confidence            76568999998765


No 275
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.63  E-value=0.028  Score=49.93  Aligned_cols=128  Identities=12%  Similarity=0.114  Sum_probs=70.6

Q ss_pred             eeEEEEcccCCcChhHHHHHHHHHhccCCC--ceeeeeee-----eeeCCceeEEEeccCCCCHH-----H------H--
Q 039471          129 EIAVKMLEHLKGNGQEFINEVATIGRIHHF--HIVRLLGF-----CSEGNRRTLIYEFMPNGSLQ-----K------F--  188 (363)
Q Consensus       129 ~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~-----~~~~~~~~lv~e~~~~~sL~-----~------~--  188 (363)
                      .+++|...........+..|..+++.+...  .+++++..     ...++..+++|++++|.++.     .      .  
T Consensus        51 ~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La  130 (328)
T 1zyl_A           51 RFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLG  130 (328)
T ss_dssp             CEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHH
T ss_pred             EEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHH
Confidence            589999864433456777888888887522  24455543     12245667899999875432     1      1  


Q ss_pred             -hhhcCC---CCCCCCCCHHH----------------------HHHHHHHHHHHHHHhhc-CCCCCceecCCCCCceEEc
Q 039471          189 -IFSKTN---SSSHRQLSWEK----------------------LRKIAFGVARGVEYLHQ-GCNQRILHFDIKPHNILLD  241 (363)
Q Consensus       189 -l~~~~~---~~~~~~l~~~~----------------------~~~i~~~i~~~l~~LH~-~~~~~i~H~dikp~Nill~  241 (363)
                       ++....   .......+...                      ....+.+++..++-+-. .....++|+|+++.|||++
T Consensus       131 ~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~  210 (328)
T 1zyl_A          131 RMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR  210 (328)
T ss_dssp             HHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES
T ss_pred             HHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc
Confidence             111100   00001112111                      11122222222222211 1136789999999999999


Q ss_pred             CCCCeeEeccccceecc
Q 039471          242 HNFQPKISDFGLAKLCS  258 (363)
Q Consensus       242 ~~~~~kl~Dfg~a~~~~  258 (363)
                       + .+.++||+.+..-.
T Consensus       211 -~-~~~lIDfe~a~~g~  225 (328)
T 1zyl_A          211 -D-GPMFVDLDDARNGP  225 (328)
T ss_dssp             -S-SEEECCCTTCCEEC
T ss_pred             -C-CCEEEECCCCCcCc
Confidence             4 89999998876543


No 276
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.47  E-value=0.011  Score=55.13  Aligned_cols=53  Identities=17%  Similarity=0.339  Sum_probs=34.8

Q ss_pred             CeeEEEEcccCCcChhHHHHHHHHHhccCCCce-eeeeeeeeeCCceeEEEeccCCCCH
Q 039471          128 NEIAVKMLEHLKGNGQEFINEVATIGRIHHFHI-VRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       128 ~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ..+++|+.... ...+.+.+|..+++.+...++ .++++.+.+    .+|+||++|.+|
T Consensus       106 ~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~l~G~~l  159 (429)
T 1nw1_A          106 NKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIPSRPL  159 (429)
T ss_dssp             SEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCCEEEC
T ss_pred             ceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEEeCCccc
Confidence            45888887432 122667789999988863333 567766543    289999987444


No 277
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.36  E-value=0.009  Score=56.09  Aligned_cols=54  Identities=15%  Similarity=0.094  Sum_probs=33.7

Q ss_pred             CeeEEEEcccCCcChhHHHHHHHHHhccCCCce-eeeeeeeeeCCceeEEEeccCCCCH
Q 039471          128 NEIAVKMLEHLKGNGQEFINEVATIGRIHHFHI-VRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       128 ~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ..+++|+........-+-.+|..+++.+...++ .++++.+..    .+|+||++|.+|
T Consensus       134 ~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~l  188 (458)
T 2qg7_A          134 AKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYAL  188 (458)
T ss_dssp             EEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEEC
T ss_pred             ceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCccC
Confidence            458888874322221122589999988864444 567776632    259999987554


No 278
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.25  E-value=0.0058  Score=55.63  Aligned_cols=30  Identities=20%  Similarity=0.349  Sum_probs=25.2

Q ss_pred             CCceecCCCCCceEEcCCCCeeEecccccee
Q 039471          226 QRILHFDIKPHNILLDHNFQPKISDFGLAKL  256 (363)
Q Consensus       226 ~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~  256 (363)
                      ..++|+|+.+.|||++.+. +.++||..+..
T Consensus       212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~  241 (369)
T 3c5i_A          212 IVFCHNDLQENNIINTNKC-LRLIDFEYSGF  241 (369)
T ss_dssp             EEEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred             eEEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence            5789999999999998654 89999987764


No 279
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.58  E-value=0.066  Score=49.15  Aligned_cols=32  Identities=25%  Similarity=0.232  Sum_probs=27.6

Q ss_pred             CCCceecCCCCCceEEcCC------CCeeEecccccee
Q 039471          225 NQRILHFDIKPHNILLDHN------FQPKISDFGLAKL  256 (363)
Q Consensus       225 ~~~i~H~dikp~Nill~~~------~~~kl~Dfg~a~~  256 (363)
                      ...++|+|+.+.|||++.+      +.+.++||..|..
T Consensus       243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~  280 (401)
T 3f2s_A          243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred             CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence            3578999999999999876      7899999998754


No 280
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=95.43  E-value=0.072  Score=46.39  Aligned_cols=62  Identities=18%  Similarity=0.132  Sum_probs=38.2

Q ss_pred             cceeecc-CCeeEEEEcccCCcC-hhHHHHHHHHHhccCC---CceeeeeeeeeeCCceeEEEeccCCCCH
Q 039471          120 SKFFFLH-SNEIAVKMLEHLKGN-GQEFINEVATIGRIHH---FHIVRLLGFCSEGNRRTLIYEFMPNGSL  185 (363)
Q Consensus       120 ~~~~~~~-~~~vAvK~~~~~~~~-~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~~~~lv~e~~~~~sL  185 (363)
                      ++.+.+. ++.|.+|+....... ...|..|.+.|+.+..   -.+.+++++.    ..+++|||++++..
T Consensus        31 vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~~~   97 (288)
T 3f7w_A           31 LYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERPP   97 (288)
T ss_dssp             EEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCCC
T ss_pred             EEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecccCC
Confidence            3334333 456999987643322 3457889999888842   2345555542    24789999876543


No 281
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.91  E-value=0.086  Score=48.80  Aligned_cols=31  Identities=16%  Similarity=0.322  Sum_probs=26.9

Q ss_pred             CCceecCCCCCceEEcCCCCeeEeccccceec
Q 039471          226 QRILHFDIKPHNILLDHNFQPKISDFGLAKLC  257 (363)
Q Consensus       226 ~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~  257 (363)
                      ..++|+|+.+.||+ +.++.+.++||..|..-
T Consensus       262 ~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~  292 (424)
T 3mes_A          262 LVFAHNDLQENNLL-QTQNNIRMIDYEYSAIN  292 (424)
T ss_dssp             EEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred             ceEECCCCCcccee-cCCCcEEEEecccCCcC
Confidence            56899999999999 77888999999987653


No 282
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=89.91  E-value=0.31  Score=43.57  Aligned_cols=33  Identities=24%  Similarity=0.275  Sum_probs=29.0

Q ss_pred             CCceecCCCCCceEEcCCCCeeEeccccceecc
Q 039471          226 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCS  258 (363)
Q Consensus       226 ~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~  258 (363)
                      ..++|+|+.+.||+++.++.+.++||+.+..-.
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~  238 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAP  238 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEEEC
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeCC
Confidence            679999999999999988889999998876544


No 283
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=88.22  E-value=1.6  Score=36.16  Aligned_cols=117  Identities=15%  Similarity=0.114  Sum_probs=76.5

Q ss_pred             CCCceeeeeeeeeeCCceeEEEeccCC-CCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHH-HhhcCCCCCceecCC
Q 039471          156 HHFHIVRLLGFCSEGNRRTLIYEFMPN-GSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVE-YLHQGCNQRILHFDI  233 (363)
Q Consensus       156 ~h~niv~~~~~~~~~~~~~lv~e~~~~-~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~-~LH~~~~~~i~H~di  233 (363)
                      .|++.  -..+-.+++.+.+.++.-++ -++. .+         ..++....++++.+|+...+ +++     .-+|.-+
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i---------~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l  110 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AI---------RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIV  110 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HH---------HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCC
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HH---------HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEE
Confidence            57776  33333566667676765533 3443 34         45788899999999887665 444     4678889


Q ss_pred             CCCceEEcCCCCeeEeccccceeccCCccccccccccccccccCCccccCc-eehhHHHHHHhcCCCCCCcchh
Q 039471          234 KPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPELFSRN-FCYGMMLLEMVGCRKNNDPAVE  306 (363)
Q Consensus       234 kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~Di-~slG~il~el~~g~~~~~~~~~  306 (363)
                      .|+||+++.++.+++.-.|+-..+++...              .+|   |. -++=+++..++.++..|+.-..
T Consensus       111 ~P~NL~f~~~~~p~i~hRGi~~~lpP~e~--------------~ee---~fl~qyKali~all~~K~~Fe~l~~  167 (219)
T 4ano_A          111 CPENLMFNRALEPFFLHVGVKESLPPDEW--------------DDE---RLLREVKATVLALTEGEYRFDEYLK  167 (219)
T ss_dssp             CGGGEEECTTCCEEESCCEETTTBSSCSC--------------CHH---HHHHHHHHHHHHHTTCSSCHHHHHH
T ss_pred             eCceEEEeCCCcEEEEEcCCcccCCCCCC--------------CHH---HHHHHHHHHHHHHHcCCCCHHHHHh
Confidence            99999999999999998887443332211              111   22 2567778888888777655433


No 284
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=86.72  E-value=1.5  Score=36.18  Aligned_cols=125  Identities=10%  Similarity=0.129  Sum_probs=81.9

Q ss_pred             HHHHHhccCCCceeeeeeeeeeCCceeEEEeccC-CCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 039471          148 EVATIGRIHHFHIVRLLGFCSEGNRRTLIYEFMP-NGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGVARGVEYLHQGCNQ  226 (363)
Q Consensus       148 E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~  226 (363)
                      |+..|. ..|++.+.. .+-.+.+...+.++.-+ +-++.. +         +.++....++++.+|+....++++    
T Consensus        36 el~LL~-~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i---------k~~~~~eKlr~l~ni~~l~~~~~~----   99 (215)
T 4ann_A           36 LMYLLE-QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I---------KSFTKNEKLRYLLNIKNLEEVNRT----   99 (215)
T ss_dssp             GGGGGG-SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G---------GGSCHHHHHHHHHHGGGGGGGGGS----
T ss_pred             HHHHHh-ccCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H---------HhcCHHHHHHHHHHHHHHHHHhcC----
Confidence            444443 357777755 34455566666666543 233333 3         567889999999999988765553    


Q ss_pred             CceecCCCCCceEEcCCCCeeEeccccceeccCCccccccccccccccccCCccccCc-eehhHHHHHHhcCCCCCCcch
Q 039471          227 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSRTAARGTSGYIAPELFSRN-FCYGMMLLEMVGCRKNNDPAV  305 (363)
Q Consensus       227 ~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~Di-~slG~il~el~~g~~~~~~~~  305 (363)
                       -+|.-+.|+||+++.++.+++.-.|+-..+++...              .+|   |. -.+=+++..+++++..|+.-.
T Consensus       100 -r~tf~L~P~NL~f~~~~~p~i~~RGik~~l~P~~~--------------~ee---~fL~qyKAliiall~~K~~Fe~l~  161 (215)
T 4ann_A          100 -RYTFVLAPDELFFTRDGLPIAKTRGLQNVVDPLPV--------------SEA---EFLTRYKALVICAFNEKQSFDALV  161 (215)
T ss_dssp             -SEECCCSGGGEEECTTSCEEESCCEETTTBSCCCC--------------CHH---HHHHHHHHHHHHHHCTTCCHHHHH
T ss_pred             -ceEEEEecceEEEcCCCCEEEEEccCccCCCCCCC--------------CHH---HHHHHHHHHHHHHHcCCCCHHHHH
Confidence             57888999999999999999998887443332210              011   22 256778888888888776543


Q ss_pred             h
Q 039471          306 E  306 (363)
Q Consensus       306 ~  306 (363)
                      .
T Consensus       162 ~  162 (215)
T 4ann_A          162 E  162 (215)
T ss_dssp             H
T ss_pred             c
Confidence            3


No 285
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=76.03  E-value=1.4  Score=40.14  Aligned_cols=30  Identities=27%  Similarity=0.328  Sum_probs=25.2

Q ss_pred             CceecCCCCCceEE------cCCCCeeEecccccee
Q 039471          227 RILHFDIKPHNILL------DHNFQPKISDFGLAKL  256 (363)
Q Consensus       227 ~i~H~dikp~Nill------~~~~~~kl~Dfg~a~~  256 (363)
                      .++|.|+.+.|||+      +++..++++||-.|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            46799999999999      4566799999998765


No 286
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=69.15  E-value=0.38  Score=45.34  Aligned_cols=30  Identities=10%  Similarity=-0.157  Sum_probs=25.7

Q ss_pred             hhHHHHHHHHHhccCCCceeeeeeeeeeCC
Q 039471          142 GQEFINEVATIGRIHHFHIVRLLGFCSEGN  171 (363)
Q Consensus       142 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~  171 (363)
                      .++|..|++.+.+++|+|+|+++|||....
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~  352 (487)
T 3oja_A          323 SETERLECERENQARQREIDALKEQYRTVI  352 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence            568999999999999999999999987643


No 287
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=50.20  E-value=75  Score=27.96  Aligned_cols=133  Identities=13%  Similarity=0.033  Sum_probs=67.7

Q ss_pred             cccCCcceeeccCCeeEEEEcccCCcChhHHHHHHHHHhccCCCceeeeeeee-----------------------eeCC
Q 039471          115 FNLTNSKFFFLHSNEIAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFC-----------------------SEGN  171 (363)
Q Consensus       115 ~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----------------------~~~~  171 (363)
                      .|.+++.++..++..+.||-..  ....+-+-.+++..-.+.-|+..-+. ..                       ...+
T Consensus        79 ~Gstgvff~~td~~~~VVK~s~--~l~~E~l~s~LA~~LGlpiP~~Riv~-~~~~E~~e~~~~L~~~~~~~~~l~~l~~~  155 (342)
T 1cja_A           79 KGTEGLFFVETESGVFIVKRST--NIESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAIDKSFRVITTLANQ  155 (342)
T ss_dssp             STTSCEEEEEESSCEEEEECCT--THHHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHCSSSCHHHHHTTC
T ss_pred             CCCCCeEEEEeCCCEEEEeCcH--HHHHHHHHHHHHHHhCCCCCCeeEEe-eCcHHHHHHHHHHHHhhhhhHHHHHhhcc
Confidence            3455555555555558888442  22223344455444445555432111 11                       0123


Q ss_pred             ceeEEEeccCCCCHHHHhhhcCCCCCCCCCCHHHHHHHHHHH--HHHHHHhhcCC-CCCcee-cCCCCCceEEcCCC-Ce
Q 039471          172 RRTLIYEFMPNGSLQKFIFSKTNSSSHRQLSWEKLRKIAFGV--ARGVEYLHQGC-NQRILH-FDIKPHNILLDHNF-QP  246 (363)
Q Consensus       172 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i--~~~l~~LH~~~-~~~i~H-~dikp~Nill~~~~-~~  246 (363)
                      ...++|||.+|..|.+.-...    -...+.++.    +.++  +-+++.+..+. +...+. ..-.+.|||++.++ .+
T Consensus       156 ~~~l~meyv~G~~L~e~~~~~----~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~  227 (342)
T 1cja_A          156 ANILLMELVRGITLNKLTTTS----APEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATV  227 (342)
T ss_dssp             SEEEEEECCCEEESTTCCSSS----HHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCE
T ss_pred             cceehhhhcCCCccccchhhh----hhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeE
Confidence            567999999876665432100    001133222    3332  33455555433 222222 23689999997644 48


Q ss_pred             eEeccccceecc
Q 039471          247 KISDFGLAKLCS  258 (363)
Q Consensus       247 kl~Dfg~a~~~~  258 (363)
                      .++|-+.+..-+
T Consensus       228 ~~IDhn~af~~~  239 (342)
T 1cja_A          228 VPIDSKIIPLDA  239 (342)
T ss_dssp             EECSCCCCCCCS
T ss_pred             EEEcCCccccCC
Confidence            899999886543


No 288
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=37.65  E-value=5.8  Score=36.93  Aligned_cols=55  Identities=4%  Similarity=-0.142  Sum_probs=14.2

Q ss_pred             ccccCCcceeeccC--CeeEE------EEcccC---CcChhHHHHHHHHHhccCCCceeeeeeeee
Q 039471          114 SFNLTNSKFFFLHS--NEIAV------KMLEHL---KGNGQEFINEVATIGRIHHFHIVRLLGFCS  168 (363)
Q Consensus       114 ~~~~~~~~~~~~~~--~~vAv------K~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~  168 (363)
                      ..|+|.+....+..  .+|||      |..+..   ......|.+|..+.+.++|+|+++.+++..
T Consensus       149 ~lGfG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          149 HVGYTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             TSSBCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             cCCchhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            45577776655554  35888      766532   223356888888888899999999988753


No 289
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=37.39  E-value=1.3e+02  Score=26.22  Aligned_cols=76  Identities=12%  Similarity=0.109  Sum_probs=46.4

Q ss_pred             CCeeEEEEcccCCcChhHHHHHHHHHhccCC---Cceeeeeee------eeeCCceeEEEeccCCCCHHHHhhhcCCCCC
Q 039471          127 SNEIAVKMLEHLKGNGQEFINEVATIGRIHH---FHIVRLLGF------CSEGNRRTLIYEFMPNGSLQKFIFSKTNSSS  197 (363)
Q Consensus       127 ~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~------~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~  197 (363)
                      +..+++|+......     ..|+..++.|..   +.+++.+..      ...++..+++|+|++|..+..          
T Consensus        46 ~g~~vLK~~~~~~~-----~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~~~~~----------  110 (339)
T 3i1a_A           46 SKSYFIKLKYGYHD-----EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNGFT----------  110 (339)
T ss_dssp             SCEEEEEEEECSSC-----CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCCBTTT----------
T ss_pred             CCCEEEEEecCccc-----hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCCcCcc----------
Confidence            34689998764432     356666666632   124455432      234567899999999876621          


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHhhc
Q 039471          198 HRQLSWEKLRKIAFGVARGVEYLHQ  222 (363)
Q Consensus       198 ~~~l~~~~~~~i~~~i~~~l~~LH~  222 (363)
                       ..++...    +.++.+.|.-||+
T Consensus       111 -~~~~~~~----~~~lg~~La~LH~  130 (339)
T 3i1a_A          111 -QNLTGKQ----WKQLGKVLRQIHE  130 (339)
T ss_dssp             -SCCCHHH----HHHHHHHHHHHHT
T ss_pred             -cCCCHHH----HHHHHHHHHHHhC
Confidence             1233332    4578888899998


No 290
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=25.46  E-value=38  Score=33.19  Aligned_cols=45  Identities=27%  Similarity=0.175  Sum_probs=31.6

Q ss_pred             HHHHHHHHHHH--HHHHHhhcCCCCCceecCCCCCceEEcCCCCeeEeccccce
Q 039471          204 EKLRKIAFGVA--RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK  255 (363)
Q Consensus       204 ~~~~~i~~~i~--~~l~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~  255 (363)
                      ..+..++..+|  ..+.|+=.   .    +|=.++|||++.+|.+.=+|||.+-
T Consensus       529 ~ar~nF~~SlA~~Svv~YILG---l----GDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          529 EVMDTYIKSCAGYCVITYLLG---V----GDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT---C----CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             HHHHHHHHHHHHHHHHHHHcc---C----CCCCCcceEEeCCCCEEEEeehhhh
Confidence            44555555544  33555543   2    4667899999999999999999864


Done!