Query 039477
Match_columns 92
No_of_seqs 117 out of 703
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 17:12:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039477.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039477hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a8u_A Major pollen allergen B 100.0 2.8E-28 9.7E-33 161.6 14.8 91 1-92 62-156 (159)
2 2wql_A Major allergen DAU C 1; 100.0 5.1E-28 1.7E-32 159.9 15.1 89 1-90 62-154 (154)
3 2vjg_A Major allergen DAU C 1; 100.0 1.2E-27 4.1E-32 157.9 15.1 89 1-90 62-154 (154)
4 3rws_A MTN13 protein; zeatin, 100.0 1.5E-27 5.2E-32 159.5 14.6 91 1-92 66-162 (168)
5 3ie5_A Phenolic oxidative coup 100.0 1.5E-27 5E-32 159.2 13.7 90 1-92 69-162 (165)
6 1vjh_A BET V I allergen family 100.0 2.7E-27 9.3E-32 150.9 13.4 84 9-92 39-122 (122)
7 2i9y_A Major latex protein-lik 100.0 2.4E-27 8.1E-32 157.8 13.2 91 1-91 76-166 (166)
8 1tw0_A Pathogenesis-related cl 99.9 1.4E-26 4.8E-31 152.7 14.4 89 3-92 63-155 (157)
9 2qim_A PR10.2B; trans-zeatin, 99.9 2.1E-26 7.3E-31 151.9 13.9 89 3-92 64-156 (158)
10 1e09_A PRU AV 1; allergen, maj 99.9 2.3E-26 8E-31 151.8 14.1 89 3-92 64-156 (159)
11 2flh_A Cytokinin-specific bind 99.9 1.2E-26 4.1E-31 153.0 11.9 87 4-91 65-154 (155)
12 1icx_A Protein LLR18A, LLPR10. 99.9 2.6E-26 8.8E-31 151.1 13.2 88 3-92 63-154 (155)
13 2vq5_A S-norcoclaurine synthas 99.9 3.3E-26 1.1E-30 156.8 10.9 90 2-92 89-181 (201)
14 3rt2_A Abscisic acid receptor 99.7 2.7E-17 9.3E-22 111.1 10.4 63 3-67 85-149 (183)
15 3jrs_A PYL1, putative uncharac 99.7 1.5E-17 5.1E-22 114.4 9.0 58 2-61 112-169 (208)
16 3p51_A Uncharacterized protein 99.7 6E-16 2.1E-20 102.1 11.8 80 4-88 56-141 (160)
17 3f08_A Uncharacterized protein 99.7 8.7E-16 3E-20 99.6 12.0 81 4-87 54-136 (146)
18 3k3k_A Abscisic acid receptor 99.7 6.7E-16 2.3E-20 106.3 11.1 55 2-61 108-162 (211)
19 3kl1_A PYL2, putative uncharac 99.7 1.6E-15 5.5E-20 102.9 12.2 63 2-66 92-158 (190)
20 3oqu_A Abscisic acid receptor 99.6 7.1E-15 2.4E-19 100.8 11.2 64 2-67 108-173 (205)
21 3oji_A Abscisic acid receptor 99.6 2.1E-14 7.3E-19 97.4 10.6 86 3-90 93-187 (189)
22 3qrz_A Abscisic acid receptor 99.6 3.3E-16 1.1E-20 108.6 1.7 81 2-85 136-218 (223)
23 2le1_A Uncharacterized protein 99.3 7E-12 2.4E-16 80.3 8.0 54 5-61 60-113 (151)
24 3tl1_A WHIE ORF VI, polyketide 98.2 6.8E-05 2.3E-09 48.7 13.2 48 12-65 70-118 (159)
25 3tvq_A Multifunctional cyclase 98.2 5.3E-05 1.8E-09 49.8 12.2 48 12-64 70-117 (169)
26 3tfz_A Cyclase; helix-GRIP, BE 98.2 0.00013 4.4E-09 47.4 13.1 50 12-64 70-119 (172)
27 2d4r_A Hypothetical protein TT 97.9 0.00088 3E-08 40.5 13.2 51 7-64 63-113 (147)
28 3p9v_A Uncharacterized protein 97.9 0.00043 1.5E-08 44.5 11.6 47 13-63 74-120 (161)
29 1t17_A Conserved hypothetical 97.0 0.0045 1.5E-07 38.6 7.7 50 7-63 67-116 (148)
30 2pcs_A Conserved protein; stru 97.0 0.026 8.8E-07 35.4 11.2 78 9-90 66-149 (162)
31 3ijt_A SMU.440, putative uncha 96.9 0.011 3.8E-07 37.9 9.0 49 5-60 74-122 (155)
32 3ggn_A Uncharacterized protein 96.7 0.035 1.2E-06 35.0 9.9 53 6-63 62-114 (155)
33 2ns9_A Hypothetical protein AP 96.5 0.063 2.2E-06 33.1 11.2 51 9-63 75-125 (157)
34 1z94_A Conserved hypothetical 94.8 0.35 1.2E-05 29.2 12.0 79 5-90 66-144 (147)
35 1xn6_A Hypothetical protein BC 94.7 0.3 1E-05 29.8 8.1 46 7-61 60-105 (143)
36 1xuv_A Hypothetical protein MM 94.6 0.51 1.7E-05 30.1 10.1 79 5-89 84-167 (178)
37 2il5_A Hypothetical protein; s 94.3 0.56 1.9E-05 29.4 9.9 81 5-89 76-167 (171)
38 2leq_A Uncharacterized protein 93.9 0.57 1.9E-05 28.0 8.6 79 5-89 61-142 (146)
39 3put_A Hypothetical conserved 93.0 1.1 3.6E-05 28.4 12.5 81 5-91 72-154 (166)
40 3rd6_A MLL3558 protein; struct 90.2 2.2 7.7E-05 26.6 12.7 79 5-89 71-151 (161)
41 2lak_A AHSA1-like protein RHE_ 89.5 1.1 3.7E-05 27.8 5.8 78 7-90 63-141 (160)
42 3q64_A MLL3774 protein; struct 89.4 2.6 9E-05 26.2 13.0 78 5-88 72-151 (162)
43 2lcg_A Uncharacterized protein 88.3 2.9 9.8E-05 25.3 11.6 70 5-90 65-134 (142)
44 3qsz_A STAR-related lipid tran 87.5 1.7 5.8E-05 27.7 5.8 52 33-89 123-179 (189)
45 3q6a_A Uncharacterized protein 86.6 3.6 0.00012 24.6 6.7 66 9-90 58-126 (135)
46 3pu2_A Uncharacterized protein 83.6 5.4 0.00018 24.9 6.7 75 5-89 75-156 (164)
47 2l8o_A Uncharacterized protein 83.0 5.9 0.0002 24.1 9.8 70 6-90 67-136 (144)
48 3uid_A Putative uncharacterize 82.4 7.1 0.00024 24.6 8.7 79 5-90 75-162 (168)
49 3eli_A AHSA1, AHA1 domain prot 78.4 9 0.00031 23.3 8.6 78 5-88 66-144 (152)
50 1xn5_A BH1534 unknown conserve 77.7 6.5 0.00022 23.8 5.4 43 6-58 56-98 (146)
51 1xfs_A NC_840354, conserved hy 76.1 12 0.0004 23.4 7.7 78 5-89 72-166 (178)
52 2k5g_A Uncharacterized protein 75.5 7.1 0.00024 25.1 5.4 77 5-91 87-164 (191)
53 3q63_A MLL2253 protein; struct 75.5 11 0.00039 23.0 7.3 79 6-89 61-141 (151)
54 1x53_A Activator of 90 kDa hea 72.1 13 0.00046 22.3 7.0 73 9-89 64-137 (145)
55 2kew_A Uncharacterized protein 70.7 12 0.00042 22.7 5.5 42 7-58 62-103 (152)
56 2lgh_A Uncharacterized protein 68.9 16 0.00056 22.0 10.4 69 6-89 66-134 (144)
57 4fpw_A CALU16; structural geno 68.3 21 0.0007 22.9 6.3 69 9-88 72-140 (181)
58 1ln1_A PC-TP, phosphatidylchol 68.1 21 0.00071 22.8 10.0 55 33-91 152-211 (214)
59 2l9p_A Uncharacterized protein 65.2 13 0.00045 22.8 4.8 77 6-89 70-155 (164)
60 2nn5_A Hypothetical protein EF 61.0 29 0.001 22.1 9.7 69 7-89 89-158 (184)
61 2qpv_A Uncharacterized protein 59.1 15 0.00052 23.1 4.3 18 38-57 107-124 (156)
62 2i46_A Adrenocortical dysplasi 56.9 0.45 1.5E-05 30.6 -3.3 79 12-92 75-158 (161)
63 3nrf_A APAG protein; structura 54.9 33 0.0011 20.8 6.2 49 10-58 50-104 (106)
64 2ldk_A Uncharacterized protein 53.5 36 0.0012 20.8 13.2 79 5-90 74-161 (172)
65 3ni8_A PFC0360W protein; heat 48.4 46 0.0016 20.6 10.2 79 7-88 71-153 (158)
66 1jss_A Stard4, cholesterol-reg 43.8 34 0.0012 22.2 4.3 50 37-89 168-223 (224)
67 2r55_A STAR-related lipid tran 38.5 79 0.0027 20.4 5.8 49 38-89 174-228 (231)
68 3p0l_A Steroidogenic acute reg 36.3 40 0.0014 21.8 3.6 49 37-88 159-213 (221)
69 1em2_A MLN64 protein; beta bar 34.1 94 0.0032 20.0 5.9 51 36-89 169-225 (229)
70 2pso_A STAR-related lipid tran 31.3 1.1E+02 0.0039 20.1 7.4 55 33-89 171-227 (237)
71 1zxf_A CALC; SELF-sacrificing 28.3 1E+02 0.0035 18.6 5.0 75 9-89 67-150 (155)
72 2luz_A CALU16; structural geno 28.3 1.2E+02 0.0042 19.5 9.7 72 8-90 82-153 (192)
73 1doa_B RHO GDI 1, protein (GDP 27.3 1.2E+02 0.0042 20.5 4.8 57 6-65 157-217 (219)
74 4err_A Autotransporter adhesin 24.4 74 0.0025 18.6 2.9 18 75-92 46-63 (90)
75 2lf2_A Uncharacterized protein 23.5 1.3E+02 0.0046 18.3 10.6 74 6-89 79-164 (175)
76 2e3n_A Lipid-transfer protein 23.2 1.6E+02 0.0056 19.2 6.2 37 49-88 204-245 (255)
77 3oh8_A Nucleoside-diphosphate 23.1 95 0.0033 22.7 4.0 48 11-62 67-114 (516)
78 1ug8_A Poly(A)-specific ribonu 20.8 72 0.0024 18.5 2.4 25 67-91 4-28 (87)
No 1
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=99.96 E-value=2.8e-28 Score=161.56 Aligned_cols=91 Identities=18% Similarity=0.314 Sum_probs=82.9
Q ss_pred CCceeEEEEEEEeeCCCCEEEEEEEecccc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhH---HHHH
Q 039477 1 GSPQIAKEIIEAIDNENYITNYKVIEGNLL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGK---LQIL 76 (92)
Q Consensus 1 g~~~~~kErl~~~D~~~~~~~y~i~eg~~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~---~~~~ 76 (92)
|+++++||||+++|+++|+++|+++||+++ .+|++|+++++|+|.++| ||+|+|+++|++.++..++|+.+ ++.+
T Consensus 62 ~~~~~~kErl~~iD~~~~~~~y~iiegd~l~~~~~~y~~ti~v~p~~~g-gs~v~wt~~y~~~~~~~~~~~~~k~~~~~~ 140 (159)
T 4a8u_A 62 FPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNG-GSILKINNKYHTKGDHEVKAEQIKASKEMG 140 (159)
T ss_dssp SSCSEEEEEEEEEETTTTEEEEEEEEETTCBTTEEEEEEEEEEEECTTS-CEEEEEEEEEEESSSCCC-CHHHHHHHHHH
T ss_pred CCccEEEEEEEEEccccCEEEEEEeeCCCCccceEEEEEEEEEEECCCC-ceEEEEEEEEEECCCCcCCHHHHHHHHHHH
Confidence 356799999999999999999999999987 779999999999998877 89999999999999988888765 7788
Q ss_pred HHHHHHHHHHHhcCCC
Q 039477 77 IDVAKDIDAHLLSQQP 92 (92)
Q Consensus 77 ~~~~k~ie~~l~~~~~ 92 (92)
.+|||+||+||++||.
T Consensus 141 ~~~~k~ie~yll~np~ 156 (159)
T 4a8u_A 141 ETLLRAVESYLLAHSD 156 (159)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhhChh
Confidence 9999999999999994
No 2
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=99.96 E-value=5.1e-28 Score=159.86 Aligned_cols=89 Identities=18% Similarity=0.246 Sum_probs=82.3
Q ss_pred CCceeEEEEEEEeeCCCCEEEEEEEecccc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHH---H
Q 039477 1 GSPQIAKEIIEAIDNENYITNYKVIEGNLL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQI---L 76 (92)
Q Consensus 1 g~~~~~kErl~~~D~~~~~~~y~i~eg~~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~---~ 76 (92)
|+..++||||+++|+++|+++|+++||+++ .+|++|+++++|+|.++| ||+++|+++|++.++..++|+.+++. +
T Consensus 62 ~~~~~~kErle~iD~~~~~~~y~iieGd~l~~~~~~~~~~ikv~p~~~g-gsvvk~t~~Y~~~~~~~~~ee~~~~~~~~~ 140 (154)
T 2wql_A 62 SPITTMTVRTDAVNKEALSYDSTVIDGDILLGFIESIETHMVVVPTADG-GSITKTTAIFHTKGDAVVPEENIKFADAQN 140 (154)
T ss_dssp CSCCEEEEEEEEEETTTTEEEEEEEESGGGTTTEEEEEEEEEEEECTTS-CEEEEEEEEEEESTTCCCCHHHHHHHHHHH
T ss_pred CCceEEEEEEEEEehhhCEEEEEEEeccccccceEEEEEEEEEeeCCCC-cEEEEEEEEEEECCCCCCCHHHHHHHHHHH
Confidence 467899999999999999999999999987 899999999999999888 99999999999999988888877554 6
Q ss_pred HHHHHHHHHHHhcC
Q 039477 77 IDVAKDIDAHLLSQ 90 (92)
Q Consensus 77 ~~~~k~ie~~l~~~ 90 (92)
.++||+||+||+||
T Consensus 141 ~~~~KaiEayLlan 154 (154)
T 2wql_A 141 TALFKAIEAYLIAN 154 (154)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HhHHHHHHHHHhcC
Confidence 79999999999998
No 3
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=99.96 E-value=1.2e-27 Score=157.89 Aligned_cols=89 Identities=18% Similarity=0.243 Sum_probs=82.1
Q ss_pred CCceeEEEEEEEeeCCCCEEEEEEEecccc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhH---HHHH
Q 039477 1 GSPQIAKEIIEAIDNENYITNYKVIEGNLL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGK---LQIL 76 (92)
Q Consensus 1 g~~~~~kErl~~~D~~~~~~~y~i~eg~~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~---~~~~ 76 (92)
|+++++||||+++|+++|+++|+++||+++ .+|++|+++++|+|.++| ||+|+|+++|++.++..++|+.+ ++.+
T Consensus 62 ~~~~~~kErl~~iD~~~~~~~y~iiegd~l~~~~~~~~~ti~v~p~~~g-gs~v~wt~~y~~~~~~~~~~~~~~~~~~~~ 140 (154)
T 2vjg_A 62 SPITTMTVRTDAVNKEALSYDSTVIDGDILLGFIESIETHMVVVPTADG-GSITKTTAIFHTKGDAVVPEENIKFADAQN 140 (154)
T ss_dssp CSCCEEEEEEEEEETTTTEEEEEEEESGGGTTTEEEEEEEEEEEECTTS-CEEEEEEEEEEESTTCCCCHHHHHHHHHHH
T ss_pred CCceEEEEEEEEEeccCCEEEEEEEecCCCccceEEEEEEEEEEECCCC-cEEEEEEEEEEECCCCCCCHHHHHHHHHHH
Confidence 356799999999999999999999999987 679999999999998877 89999999999999988888874 6888
Q ss_pred HHHHHHHHHHHhcC
Q 039477 77 IDVAKDIDAHLLSQ 90 (92)
Q Consensus 77 ~~~~k~ie~~l~~~ 90 (92)
.+|||+||+||++|
T Consensus 141 ~~~~k~ie~yllan 154 (154)
T 2vjg_A 141 TALFKAIEAYLIAN 154 (154)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999997
No 4
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=99.95 E-value=1.5e-27 Score=159.50 Aligned_cols=91 Identities=21% Similarity=0.296 Sum_probs=82.3
Q ss_pred CCceeEEEEEEEeeCCCCEEEEEEEecccc-c-ceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCC-CCCChhh---HHH
Q 039477 1 GSPQIAKEIIEAIDNENYITNYKVIEGNLL-E-LYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNE-DVPDPTG---KLQ 74 (92)
Q Consensus 1 g~~~~~kErl~~~D~~~~~~~y~i~eg~~~-~-~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~-~~~~~~~---~~~ 74 (92)
|+..++||||+++|+++|+++|+++||+++ . |+++|+++++|+|.++| ||+|+|+++|++.++ ..++|+. +++
T Consensus 66 g~~~~~kErl~~iD~~~~~~sY~iiegd~l~~~p~~~y~~ti~v~p~~~g-gs~v~wt~~y~~~~~d~~~~~e~~k~~~~ 144 (168)
T 3rws_A 66 GDFGSTKQHIDMVDRENCAYTYSVYEGIALSDQPLEKIVFEFKLVPTPEE-GCIVKSTTKYYTKGDDIELSKDYLEAGIE 144 (168)
T ss_dssp SSSCEEEEEEEEEETTTTEEEEEECSSCCBTTBCEEEEEEEEEEEECTTS-CEEEEEEEEEEECSSSCCCCHHHHHHHHH
T ss_pred CCCeEEEEEEEEEcccCCEEEEEEEccCcccCcCceEEEEEEEEEECCCC-ceEEEEEEEEEECCCccCCCHHHHHHHHH
Confidence 456899999999999999999999999998 5 59999999999998877 899999999999988 5566765 577
Q ss_pred HHHHHHHHHHHHHhcCCC
Q 039477 75 ILIDVAKDIDAHLLSQQP 92 (92)
Q Consensus 75 ~~~~~~k~ie~~l~~~~~ 92 (92)
.+.+|||+||+||++||.
T Consensus 145 ~~~~~~k~ie~yllanp~ 162 (168)
T 3rws_A 145 RFEGFTKAVESFLLANPD 162 (168)
T ss_dssp HHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHhChH
Confidence 889999999999999984
No 5
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=99.95 E-value=1.5e-27 Score=159.20 Aligned_cols=90 Identities=16% Similarity=0.192 Sum_probs=82.1
Q ss_pred CCceeEEEEEEEeeCCCCEEEEEEEecccc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhH---HHHH
Q 039477 1 GSPQIAKEIIEAIDNENYITNYKVIEGNLL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGK---LQIL 76 (92)
Q Consensus 1 g~~~~~kErl~~~D~~~~~~~y~i~eg~~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~---~~~~ 76 (92)
|+++++||||+++|+++|+++|+++||+++ .+|++|+++++|+ .++| ||+|+|+++|++.++..++|+.+ ++.+
T Consensus 69 ~~~~~~kErl~~iD~~~~~~~Y~iieG~~l~~~~~~y~~~i~v~-~~~g-gs~vkwt~~y~~~~~~~~~~e~~k~~~~~~ 146 (165)
T 3ie5_A 69 HPLTYMLHKFDEIDAANFYCKYTLFEGDVLRDNIEKVVYEVKLE-AVGG-GSKGKITVTYHPKPGCTVNEEEVKIGEKKA 146 (165)
T ss_dssp SSCCEEEEEEEEEEGGGTEEEEEEEEEGGGTTTEEEEEEEEEEE-EETT-EEEEEEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred CCCceEEEEEEEEchhcCEEEEEEecCCCCccceEEEEEEEEEE-eCCC-ceEEEEEEEEEECCCCCCCHHHHHHHHHHH
Confidence 356799999999999999999999999987 6899999999999 5555 89999999999999988888876 6888
Q ss_pred HHHHHHHHHHHhcCCC
Q 039477 77 IDVAKDIDAHLLSQQP 92 (92)
Q Consensus 77 ~~~~k~ie~~l~~~~~ 92 (92)
.+|||+||+||++||.
T Consensus 147 ~~~~K~ie~yllanp~ 162 (165)
T 3ie5_A 147 YEFYKQVEEYLAANPE 162 (165)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhChh
Confidence 9999999999999994
No 6
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=99.95 E-value=2.7e-27 Score=150.89 Aligned_cols=84 Identities=26% Similarity=0.476 Sum_probs=77.7
Q ss_pred EEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHHHHHHHHHh
Q 039477 9 IIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVAKDIDAHLL 88 (92)
Q Consensus 9 rl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~k~ie~~l~ 88 (92)
||+++|+++|+++|+++||+++.+|++|+++++|+|.++++||+|+|+++|++.++..++|+.+++.+.+|||+||+||+
T Consensus 39 ~ie~iD~~~~~~~y~iieGd~~~~~~~~~~~~~v~~~~~~~gs~vkwt~~ye~~~~~~~~p~~~~~~~~~~~k~ie~yll 118 (122)
T 1vjh_A 39 EIEAVDLVKKTMTIQMSGSEIQKYFKTLKGSIAVTPIGVGDGSHVVWTFHFEKVHKDIDDPHSIIDESVKYFKKLDEAIL 118 (122)
T ss_dssp EEEEEETTTTEEEEEEECTTGGGTEEEEEEEEEEEECSSSSCEEEEEEEEEEESSTTSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecccCEEEEEEEEccccccEEEEEEEEEEEEecCCCCeEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999878899999999999986333899999999999999999999999999999999999999
Q ss_pred cCCC
Q 039477 89 SQQP 92 (92)
Q Consensus 89 ~~~~ 92 (92)
+||.
T Consensus 119 ~~p~ 122 (122)
T 1vjh_A 119 NFKE 122 (122)
T ss_dssp HC--
T ss_pred hCCC
Confidence 9983
No 7
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=99.95 E-value=2.4e-27 Score=157.83 Aligned_cols=91 Identities=46% Similarity=0.847 Sum_probs=84.7
Q ss_pred CCceeEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHH
Q 039477 1 GSPQIAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVA 80 (92)
Q Consensus 1 g~~~~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~ 80 (92)
|++.++||||+++|+++|+++|+++||+++.+|++|.++++|+|.++|+||+|+|+++|++.++..++|+.+++++.+|+
T Consensus 76 g~~~~~kErl~~iD~~~~~~~y~iieGd~~~~~~~~~~ti~v~p~~~g~gs~v~wt~~ye~~~~~~~~p~~~~~~~~~~~ 155 (166)
T 2i9y_A 76 GEAKVAKERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYEKISEEVAHPETLLQFCVEVS 155 (166)
T ss_dssp TEEEEEEEEEEEEETTTTEEEEEECCTTGGGTEEEEEEEEEEEEEEETTEEEEEEEEEEEESSTTTCCTHHHHHHHHHHH
T ss_pred CCceEEEEEEEEEeccCcEEEEEEEeCCCCCCeeEEEEEEEEEECCCCCCcEEEEEEEEEECCCCCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999998778999999999999876558999999999999998888999999999999
Q ss_pred HHHHHHHhcCC
Q 039477 81 KDIDAHLLSQQ 91 (92)
Q Consensus 81 k~ie~~l~~~~ 91 (92)
|+||+||++||
T Consensus 156 k~ie~~l~~~~ 166 (166)
T 2i9y_A 156 KEIDEHLLAEE 166 (166)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHhhCC
Confidence 99999999996
No 8
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=99.95 E-value=1.4e-26 Score=152.74 Aligned_cols=89 Identities=19% Similarity=0.264 Sum_probs=82.4
Q ss_pred ceeEEEEEEEeeCCCCEEEEEEEecccc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhH---HHHHHH
Q 039477 3 PQIAKEIIEAIDNENYITNYKVIEGNLL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGK---LQILID 78 (92)
Q Consensus 3 ~~~~kErl~~~D~~~~~~~y~i~eg~~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~---~~~~~~ 78 (92)
+.++||||+++|+++|+++|+++||+++ ..|++|.++++|+|.++| ||+|+|+++|++.++..++|+.+ ++.+.+
T Consensus 63 ~~~~kErl~~~D~~~~~~~y~iieGd~~~~~~~~~~~~~~v~~~~~~-gs~v~w~~~y~~~~~~~~~~~~~~~~~~~~~~ 141 (157)
T 1tw0_A 63 TSFVLQKVDAIDEANLGYDYSIVGGTGLPESLEKLSFETKVVAGSGG-GSISKVTLKFHTKGDAPLSDAVRDDALAKGAG 141 (157)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEECTTSCTTEEEEEEEEEEEECSSS-SEEEEEEEEEEESTTCCCCHHHHHHHHHHHHH
T ss_pred cceEEEEEEEEeccCCEEEEEEEecCCCccceEEEEEEEEEEecCCC-CEEEEEEEEEEECCCCCCCHHHHHHHHHHHHH
Confidence 3689999999999999999999999987 479999999999998776 89999999999999988888888 788899
Q ss_pred HHHHHHHHHhcCCC
Q 039477 79 VAKDIDAHLLSQQP 92 (92)
Q Consensus 79 ~~k~ie~~l~~~~~ 92 (92)
|+|+||+||++||.
T Consensus 142 ~~k~ie~yll~~p~ 155 (157)
T 1tw0_A 142 FFKAIEGYVLANPA 155 (157)
T ss_dssp HHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999999984
No 9
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=99.94 E-value=2.1e-26 Score=151.90 Aligned_cols=89 Identities=22% Similarity=0.223 Sum_probs=82.5
Q ss_pred ceeEEEEEEEeeCCCCEEEEEEEecccc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhH---HHHHHH
Q 039477 3 PQIAKEIIEAIDNENYITNYKVIEGNLL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGK---LQILID 78 (92)
Q Consensus 3 ~~~~kErl~~~D~~~~~~~y~i~eg~~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~---~~~~~~ 78 (92)
+.++||||+++|+++|+++|+++||+++ ..|++|.++++|+|.++| ||+|+|+++|++.++..++|+.+ ++.+.+
T Consensus 64 ~~~~kErl~~~D~~~~~~~y~iieG~~~~~~~~~~~~~~~v~~~~~~-gs~v~wt~~y~~~~~~~~~~~~~~~~~~~~~~ 142 (158)
T 2qim_A 64 SKYVLHKIEAIDEANLGYNYSIVGGVGLPDTIEKISFETKLVEGANG-GSIGKVTIKIETKGDAQPNEEEGKAAKARGDA 142 (158)
T ss_dssp EEEEEEEEEEEEGGGTEEEEEEEEESSCCCSEEEEEEEEEEEECSTT-CEEEEEEEEEEESTTCCCCHHHHHHHHHHHHH
T ss_pred ceeEEEEEEEEecCCCEEEEEEEeccCCccceEEEEEEEEEEecCCC-CEEEEEEEEEEECCCCCCCHHHHHHHHHHHHH
Confidence 3689999999999999999999999987 479999999999998776 89999999999999988888888 788899
Q ss_pred HHHHHHHHHhcCCC
Q 039477 79 VAKDIDAHLLSQQP 92 (92)
Q Consensus 79 ~~k~ie~~l~~~~~ 92 (92)
|+|+||+||++||.
T Consensus 143 ~~k~ie~yll~~p~ 156 (158)
T 2qim_A 143 FFKAIESYLSAHPD 156 (158)
T ss_dssp HHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHhCcC
Confidence 99999999999984
No 10
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=99.94 E-value=2.3e-26 Score=151.83 Aligned_cols=89 Identities=22% Similarity=0.279 Sum_probs=83.0
Q ss_pred ceeEEEEEEEeeCCCCEEEEEEEecccc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhH---HHHHHH
Q 039477 3 PQIAKEIIEAIDNENYITNYKVIEGNLL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGK---LQILID 78 (92)
Q Consensus 3 ~~~~kErl~~~D~~~~~~~y~i~eg~~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~---~~~~~~ 78 (92)
+.++||||+++|+++|+++|++++|+++ .+|++|.++++|.|.++| ||+|+|+++|++.++..++|+.+ ++.+.+
T Consensus 64 ~~~~kErl~~~D~~~~~~~y~iieG~~~~~~~~~~~~~~~v~~~~~~-gs~v~wt~~y~~~~~~~~~~~~~~~~~~~~~~ 142 (159)
T 1e09_A 64 YGYVKHKIDSIDKENYSYSYTLIEGDALGDTLEKISYETKLVASPSG-GSIIKSTSHYHTKGNVEIKEEHVKAGKEKASN 142 (159)
T ss_dssp CEEEEEEEEEEETTTTEEEEEECCCTTTGGGEEEEEEEEEECCCTTS-SEEEEEEEEEEECSSCCCCHHHHHHHHHHHHH
T ss_pred ceEEEEEEEEEcCCCCEEEEEEEecccCcccceEEEEEEEEEecCCC-CEEEEEEEEEEECCCCCCCHHHHHHHHHHHHH
Confidence 3789999999999999999999999987 589999999999998776 89999999999999988888887 788899
Q ss_pred HHHHHHHHHhcCCC
Q 039477 79 VAKDIDAHLLSQQP 92 (92)
Q Consensus 79 ~~k~ie~~l~~~~~ 92 (92)
|+|+||+||++||.
T Consensus 143 ~~k~ie~yll~~~~ 156 (159)
T 1e09_A 143 LFKLIETYLKGHPD 156 (159)
T ss_dssp HHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhChh
Confidence 99999999999984
No 11
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=99.94 E-value=1.2e-26 Score=152.97 Aligned_cols=87 Identities=21% Similarity=0.242 Sum_probs=73.5
Q ss_pred eeEEEEEEEeeCCCCEEEEEEEecccc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHH--HHHHHHH
Q 039477 4 QIAKEIIEAIDNENYITNYKVIEGNLL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKL--QILIDVA 80 (92)
Q Consensus 4 ~~~kErl~~~D~~~~~~~y~i~eg~~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~--~~~~~~~ 80 (92)
+++||||+++|+++|+++|++++|+++ .+|++|+++++|+|.++| ||+|+|+++|++.++..+++..++ +.+.+||
T Consensus 65 ~~~kErl~~iD~~~~~~~y~iieg~~l~~~~~~~~~~i~v~p~~~g-gs~v~wt~~y~~~~~~~~~~~~~~~~~~~~~~~ 143 (155)
T 2flh_A 65 SYQREEITEFDESSHEIGLQVIEGGYLSQGLSYYKTTFKLSEIEED-KTLVNVKISYDHDSDIEEKVTPTKTSQSTLMYL 143 (155)
T ss_dssp CEEEEEEEEEETTTTEEEEEEEEEGGGGTTCSEEEEEEEEEEEETT-EEEEEEEEEEEC-------CCHHHHHHHHHHHH
T ss_pred cEEEEEEEEEeCCCCEEEEEEEeccccccCceEEEEEEEEEECCCC-CEEEEEEEEEEECCCCccChhHhhhHHHHHHHH
Confidence 799999999999999999999999987 789999999999999877 899999999999998877778888 8999999
Q ss_pred HHHHHHHhcCC
Q 039477 81 KDIDAHLLSQQ 91 (92)
Q Consensus 81 k~ie~~l~~~~ 91 (92)
|+||+||++||
T Consensus 144 k~ie~yll~~~ 154 (155)
T 2flh_A 144 RRLERYLSNGS 154 (155)
T ss_dssp HHHHHHHC---
T ss_pred HHHHHHHhhCC
Confidence 99999999997
No 12
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=99.94 E-value=2.6e-26 Score=151.09 Aligned_cols=88 Identities=22% Similarity=0.278 Sum_probs=81.2
Q ss_pred ceeEEEEEEEeeCCCCEEEEEEEecccc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhH---HHHHHH
Q 039477 3 PQIAKEIIEAIDNENYITNYKVIEGNLL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGK---LQILID 78 (92)
Q Consensus 3 ~~~~kErl~~~D~~~~~~~y~i~eg~~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~---~~~~~~ 78 (92)
+.++||||+++|+++|+++|+++||+++ ..|++|.++++|+|.+++ ||+|+|+++|++.++. ++|+.+ ++.+.+
T Consensus 63 ~~~~kErl~~~D~~~~~~~y~iieGd~~~~~~~~~~~~~~v~~~~~~-gs~v~w~~~y~~~~~~-~~~~~~~~~~~~~~~ 140 (155)
T 1icx_A 63 TSFVLHKLDAIDEANLTYNYSIIGGEGLDESLEKISYESKILPGPDG-GSIGKINVKFHTKGDV-LSETVRDQAKFKGLG 140 (155)
T ss_dssp EEEEEEEEEEEEGGGTEEEEEEEEETTSCTTEEEEEEEEEEEECGGG-CEEEEEEEEEEESSSS-CCHHHHTTHHHHHHH
T ss_pred ceeEEEEEEEEeccCCEEEEEEEecCCCccceEEEEEEEEEEecCCC-CEEEEEEEEEEECCCC-CCHHHHHHHHHHHHH
Confidence 3689999999999999999999999987 479999999999998776 8999999999999988 888777 888999
Q ss_pred HHHHHHHHHhcCCC
Q 039477 79 VAKDIDAHLLSQQP 92 (92)
Q Consensus 79 ~~k~ie~~l~~~~~ 92 (92)
|+|+||+||++||.
T Consensus 141 ~~k~ie~yll~~p~ 154 (155)
T 1icx_A 141 LFKAIEGYVLAHPD 154 (155)
T ss_dssp HHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999999984
No 13
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=99.94 E-value=3.3e-26 Score=156.81 Aligned_cols=90 Identities=26% Similarity=0.311 Sum_probs=80.9
Q ss_pred CceeEEEEEEEeeCCCCEEEEEEEecccc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCC--ChhhHHHHHHH
Q 039477 2 SPQIAKEIIEAIDNENYITNYKVIEGNLL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVP--DPTGKLQILID 78 (92)
Q Consensus 2 ~~~~~kErl~~~D~~~~~~~y~i~eg~~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~--~~~~~~~~~~~ 78 (92)
+++++||||+++|+++|+++|+++||+++ .+|++|+++++|+|.++| ||+++|+++|++.++.++ ++...++.+.+
T Consensus 89 ~~~~vkErle~iDde~~~~sYsiieGd~l~~~~~~y~~tikv~p~~dg-gs~vkWt~~ye~~~~~~~~~e~~~~~~~~~~ 167 (201)
T 2vq5_A 89 FPHEYKEKFILVDNEHRLKKVQMIEGGYLDLGVTYYMDTIHVVPTGKD-SCVIKSSTEYHVKPEFVKIVEPLITTGPLAA 167 (201)
T ss_dssp SSCEEEEEEEEEETTTTEEEEEEEEEGGGGTTEEEEEEEEEEEEEETT-EEEEEEEEEEEECGGGHHHHTTTCCSHHHHH
T ss_pred cccEEEEEEEEEchhhCEEEEEEEecCccccceeEEEEEEEEEECCCC-CeEEEEEEEEEECCCCCCCChhHHHHHHHHH
Confidence 45799999999999999999999999987 789999999999999877 899999999999987622 44566889999
Q ss_pred HHHHHHHHHhcCCC
Q 039477 79 VAKDIDAHLLSQQP 92 (92)
Q Consensus 79 ~~k~ie~~l~~~~~ 92 (92)
|+|+||+||++||.
T Consensus 168 ~~KaiE~yLlanp~ 181 (201)
T 2vq5_A 168 MADAISKLVLEHKS 181 (201)
T ss_dssp HHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999999983
No 14
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=99.73 E-value=2.7e-17 Score=111.10 Aligned_cols=63 Identities=19% Similarity=0.370 Sum_probs=56.7
Q ss_pred ceeEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeC-CCC-ceEEEEEEEEEEcCCCCC
Q 039477 3 PQIAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKE-NDD-GSLVHWIFEYEKLNEDVP 67 (92)
Q Consensus 3 ~~~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~-~g~-~~~v~W~~~ye~~~~~~~ 67 (92)
..++||||+++|+++|+|+|+|++|++ ++++|.++|+|.|.+ +|+ +|+|+|+++|++..+...
T Consensus 85 ~~~vkErL~~~D~~~~~~sY~Iieg~l--p~~~y~ati~v~p~~~dG~~gt~V~Ws~~fd~~~g~~~ 149 (183)
T 3rt2_A 85 ATKSTEVLEILDDNEHILGIRIVGGDH--RLKNYSSTISLHSETIDGKTGTLAIESFVVDVPEGNTK 149 (183)
T ss_dssp TCEEEEEEEEEETTTTEEEEEEEEESC--SCTTCEEEEEEEEEEETTEEEEEEEEEEEEECCTTCCH
T ss_pred cceEEEEEEEEECCCCEEEEEEecCCc--ceeEEEEEEEEEEecCCCCCCEEEEEEEEEEcCCCCCH
Confidence 478999999999999999999999998 899999999999987 664 799999999998765543
No 15
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=99.73 E-value=1.5e-17 Score=114.35 Aligned_cols=58 Identities=16% Similarity=0.375 Sum_probs=49.3
Q ss_pred CceeEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEE
Q 039477 2 SPQIAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEK 61 (92)
Q Consensus 2 ~~~~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~ 61 (92)
+..++||||+++|+++|+|+|+|++|++ ++++|.++|+|.|.+++++|.|+|+++|++
T Consensus 112 p~~~vkErL~~lDde~~~~sYsIieG~l--pv~~Y~sti~V~p~~~g~~t~V~Wt~~fes 169 (208)
T 3jrs_A 112 PANTSRERLDLLDDDRRVTGFSITGGEH--RLRNYKSVTTVHRFEKEEEEERIWTVVLES 169 (208)
T ss_dssp SCCEEEEEEEEEETTTTEEEEEEEESSS--SCTTCEEEEEEEEEEC-----CEEEEEEEE
T ss_pred ccceEEEEEEEEeccCCEEEEEEeeCCc--ceeeEEEEEEEEEccCCCccEEEEEEEEEE
Confidence 3478999999999999999999999998 899999999999976555899999999995
No 16
>3p51_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.06A {Nitrosospira multiformis}
Probab=99.68 E-value=6e-16 Score=102.08 Aligned_cols=80 Identities=15% Similarity=0.200 Sum_probs=62.1
Q ss_pred eeEEEEEEEeeCCCCEEEEEEEecccccc-----eeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhH-HHHHH
Q 039477 4 QIAKEIIEAIDNENYITNYKVIEGNLLEL-----YKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGK-LQILI 77 (92)
Q Consensus 4 ~~~kErl~~~D~~~~~~~y~i~eg~~~~~-----~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~-~~~~~ 77 (92)
.+++|||+++|+++|+++|++++|++ + +++|.++++|.|.++++||+|+|+++|++.++ ..... ...+.
T Consensus 56 g~v~Erl~~~D~~~~~~sY~ii~g~l--~~~~~~~~~y~~~~~v~p~~~~ggt~V~w~~~~~~~~~---~~~~~~~~~~~ 130 (160)
T 3p51_A 56 GEFLDTLIAYSEIERRIMYSMDEGPS--PVSSGEIYNYVGNLHLLPVTIDDTTFVEWSGSWESAST---EAVEYMNTVYR 130 (160)
T ss_dssp TTEEEEEEEEETTTTEEEEEEEECST--TSSTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESCS---HHHHHHHHHHH
T ss_pred CEEEEEEEEEcCCCcEEEEEEecCCC--cccccceeEEEEEEEEEEecCCCCEEEEEEEEEEeCHH---HHHHHHHHHHH
Confidence 36899999999999999999999988 6 99999999999987334999999999999742 11122 23344
Q ss_pred HHHHHHHHHHh
Q 039477 78 DVAKDIDAHLL 88 (92)
Q Consensus 78 ~~~k~ie~~l~ 88 (92)
..++.|.+.+-
T Consensus 131 ~~L~~Lk~~~e 141 (160)
T 3p51_A 131 SLLADLAAEFT 141 (160)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHHHh
Confidence 56666655543
No 17
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=99.68 E-value=8.7e-16 Score=99.62 Aligned_cols=81 Identities=17% Similarity=0.288 Sum_probs=60.5
Q ss_pred eeEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEe-eCCCCceEEEEEEEEEEcCCCCCChhhH-HHHHHHHHH
Q 039477 4 QIAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTP-KENDDGSLVHWIFEYEKLNEDVPDPTGK-LQILIDVAK 81 (92)
Q Consensus 4 ~~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p-~~~g~~~~v~W~~~ye~~~~~~~~~~~~-~~~~~~~~k 81 (92)
.+++|||+++|+++|+++|++++|++ ++++|.++++|.| .+++ ||+|+|+++|++.+...+..... ..++...++
T Consensus 54 ~~~~Erl~~~D~~~~~~~y~iv~g~~--~~~~~~~~~~v~p~~~~~-gt~v~w~~~~~p~g~~~~~~~~~~~~~~~~~L~ 130 (146)
T 3f08_A 54 ETIIERLEVFNDKERYYTYSIMNAPF--PVTNYLSTIQVKEGTESN-TSLVEWSGTFTPVAVSDEEAINLVHGIYSDGLK 130 (146)
T ss_dssp CEEEEEEEEEETTTTEEEEEEEECSS--SEEEEEEEEEEEECSSTT-CEEEEEEEEEEESSSCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEeCCCCEEEEEEecCCC--ceeEEEEEEEEEEecCCC-cEEEEEEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999999988 8999999999999 4555 89999999999843221111111 223335555
Q ss_pred HHHHHH
Q 039477 82 DIDAHL 87 (92)
Q Consensus 82 ~ie~~l 87 (92)
.|.+.+
T Consensus 131 ~Lk~~~ 136 (146)
T 3f08_A 131 ALQHAF 136 (146)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 555544
No 18
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=99.67 E-value=6.7e-16 Score=106.33 Aligned_cols=55 Identities=20% Similarity=0.406 Sum_probs=50.9
Q ss_pred CceeEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEE
Q 039477 2 SPQIAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEK 61 (92)
Q Consensus 2 ~~~~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~ 61 (92)
++.+++|||+++|+++|+|+|+|++|++ ++++|.++|+|.|.++| + |+|+++|+.
T Consensus 108 p~~~vkErL~~lDd~~~~~sYsIieg~l--pv~~Y~sti~V~p~~~g-g--V~Wt~~fes 162 (211)
T 3k3k_A 108 PANTSTERLDILDDERRVTGFSIIGGEH--RLTNYKSVTTVHRFEKE-N--RIWTVVLES 162 (211)
T ss_dssp SCEEEEEEEEEEETTTTEEEEEEEEETT--GGGTCEEEEEEEEEEET-T--EEEEEEEEE
T ss_pred ccceEEEEEEEEeccCCEEEEEEeecCc--ceeEEEEEEEEEECCCC-C--EEEEEEEEE
Confidence 4579999999999999999999999998 89999999999999776 4 999999995
No 19
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=99.66 E-value=1.6e-15 Score=102.92 Aligned_cols=63 Identities=14% Similarity=0.254 Sum_probs=51.7
Q ss_pred CceeEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEee----CCCCceEEEEEEEEEEcCCCC
Q 039477 2 SPQIAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPK----ENDDGSLVHWIFEYEKLNEDV 66 (92)
Q Consensus 2 ~~~~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~----~~g~~~~v~W~~~ye~~~~~~ 66 (92)
++.++||||+++|+++|+|+|+|++|++ ++++|.+++++.|. .++++|+|+|+++|++..+.+
T Consensus 92 p~~~vkErL~~iD~~~~~~sY~iieG~~--~~~~Y~s~~~v~~~~~~~~~~~gt~V~Ws~~f~~p~g~~ 158 (190)
T 3kl1_A 92 PASTSTERLEFVDDDHRVLSFRVVGGEH--RLKNYKSVTSVNEFLNQDSGKVYTVVLESYTVDIPEGNT 158 (190)
T ss_dssp SCEEEEEEEEEEETTTTEEEEEEEEESS--SCCSCEEEEEEEEEEC-CCCCEEEEEEEEEEEECCTTCC
T ss_pred ccceEEEEEEEEeccCCEEEEEEEecCC--ccccEEEEEEEEecccccCCCCcEEEEEEEEEEcCCCCC
Confidence 4579999999999999999999999999 67777777777763 223489999999999665543
No 20
>3oqu_A Abscisic acid receptor PYL9; RCAR1, hormone receptor; HET: A8S; 2.68A {Arabidopsis thaliana}
Probab=99.61 E-value=7.1e-15 Score=100.83 Aligned_cols=64 Identities=25% Similarity=0.353 Sum_probs=56.3
Q ss_pred CceeEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCC-C-CceEEEEEEEEEEcCCCCC
Q 039477 2 SPQIAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKEN-D-DGSLVHWIFEYEKLNEDVP 67 (92)
Q Consensus 2 ~~~~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~-g-~~~~v~W~~~ye~~~~~~~ 67 (92)
++.++||||+++|+++|+|+|+|++|++ +|++|.++|+|.|.++ | .+|++.|++.+++..+...
T Consensus 108 p~~~vkErL~~lDde~~~~sYsIieG~l--pv~~Y~ati~V~p~~~dG~~~T~v~ws~~~D~p~g~t~ 173 (205)
T 3oqu_A 108 PATTSTERLELLDDEEHILGIKIIGGDH--RLKNYSSILTVHPEIIEGRAGTMVIESFVVDVPQGNTK 173 (205)
T ss_dssp SCSEEEEEEEEEETTTTEEEEEEEEESS--SCTTCEEEEEEEEECCCC-CEEEEEEEEEEECCTTCCH
T ss_pred ccceEEEEEEEEECCCCEEEEEEEecCc--ceeEEEEEEEEEEccCCCCceEEEEEEEeccCCCCCCH
Confidence 3478999999999999999999999998 8999999999999884 4 2799999999987766543
No 21
>3oji_A Abscisic acid receptor PYL3; crystal, PP2C, pyrabactin, HOR receptor; HET: PYV; 1.84A {Arabidopsis thaliana} PDB: 4ds8_A* 3klx_A* 4dsb_A* 4dsc_A*
Probab=99.58 E-value=2.1e-14 Score=97.36 Aligned_cols=86 Identities=15% Similarity=0.201 Sum_probs=64.4
Q ss_pred ceeEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeC---CC----CceEEEEEEEEEEcCCCCCC-hhhHHH
Q 039477 3 PQIAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKE---ND----DGSLVHWIFEYEKLNEDVPD-PTGKLQ 74 (92)
Q Consensus 3 ~~~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~---~g----~~~~v~W~~~ye~~~~~~~~-~~~~~~ 74 (92)
..+++|||+++|+++|+|+|+|++|++ ++++|.++++|.|.+ +| ++|++.|++.+++..+.+.+ ...+.+
T Consensus 93 ~~~i~ErL~~lDde~~~~sY~Iieg~~--pv~nY~StitV~~~~~~~~G~~~~~~T~v~es~~~D~P~g~t~e~~~~~v~ 170 (189)
T 3oji_A 93 ASTSVEILEVLDEEKRILSFRVLGGEH--RLNNYRSVTSVNEFVVLEKDKKKRVYSVVLESYIVDIPQGNTEEDTRMFVD 170 (189)
T ss_dssp BSEEEEEEEEEETTTTEEEEEEEECSB--SSCSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEECCTTSCHHHHHHHHH
T ss_pred CceEEEEEEEEeccCCEEEEEEEecCC--ccccEEEEEEEEeccccCCCccccCcEEEEEeEecCCCCCCCHHHHHHHHH
Confidence 368999999999999999999999999 899999999999864 33 36999999999876655432 222233
Q ss_pred -HHHHHHHHHHHHHhcC
Q 039477 75 -ILIDVAKDIDAHLLSQ 90 (92)
Q Consensus 75 -~~~~~~k~ie~~l~~~ 90 (92)
.+...+++|.+..-+.
T Consensus 171 ~v~~~gL~~L~~~~e~~ 187 (189)
T 3oji_A 171 TVVKSNLQNLAVISTAS 187 (189)
T ss_dssp HHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 3345666666654443
No 22
>3qrz_A Abscisic acid receptor PYL5; crystal, hormone receptor; 2.60A {Arabidopsis thaliana}
Probab=99.58 E-value=3.3e-16 Score=108.64 Aligned_cols=81 Identities=14% Similarity=0.259 Sum_probs=55.2
Q ss_pred CceeEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCC-ChhhHHH-HHHHH
Q 039477 2 SPQIAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVP-DPTGKLQ-ILIDV 79 (92)
Q Consensus 2 ~~~~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~-~~~~~~~-~~~~~ 79 (92)
++.++||||+++|+++|+|+|+|++|++ ++++|.++++|.|.++| ||+|+|++.|++..+... ....+.+ ++...
T Consensus 136 p~~~vkErLe~iDde~~~~sYsIieG~~--p~~~Y~stikV~p~~dG-GT~V~Ws~~f~pp~g~~~e~a~~~v~~~y~~g 212 (223)
T 3qrz_A 136 PAVSSTERLEILDEERHVISFSVVGGDH--RLKNYRSVTTLHASDDE-GTVVVESYIVDVPPGNTEEETLSFVDTIVRCN 212 (223)
T ss_dssp CCCCCCCCCSEEETTTTEEECCCTTCSS--SCCCCCCEEEC---------CCEEEEEECSCSSSCSTTHHHHHHHHHHHH
T ss_pred ccceEEEEEEEEeccCCEEEEEEEeCCC--ccccEEEEEEEEEcCCC-CEEEEEEEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 3468999999999999999999999999 89999999999998777 899999999996544333 2333333 22344
Q ss_pred HHHHHH
Q 039477 80 AKDIDA 85 (92)
Q Consensus 80 ~k~ie~ 85 (92)
+++|.+
T Consensus 213 L~~Lk~ 218 (223)
T 3qrz_A 213 LQSLAR 218 (223)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 23
>2le1_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, unknown function; NMR {Thermobifida fusca}
Probab=99.32 E-value=7e-12 Score=80.31 Aligned_cols=54 Identities=13% Similarity=0.213 Sum_probs=49.9
Q ss_pred eEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEE
Q 039477 5 IAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEK 61 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~ 61 (92)
+++|+|+.+|+.+++++|++++|++ ++++|.++++|.|.+++ +|.++|+++|++
T Consensus 60 ~~~e~i~~~d~~~~~~~~~~~~g~~--~~~~~~~~~~l~~~~~~-gt~v~w~~~f~~ 113 (151)
T 2le1_A 60 ELVERLVERDESARRLVYTMPDPPF--PITNHRAVLEVVPRDDR-HCTVVWTAMFDC 113 (151)
T ss_dssp CEEEEEEEEETTTTEEEEEEEECSS--SEEEEEEEEEEEESSSS-CEEEEEEEEEEE
T ss_pred EEEEEEEEEeCCCCEEEEEEecCCC--CceeEEEEEEEEECCCC-cEEEEEEEEEEe
Confidence 7899999999999999999999987 89999999999996555 899999999997
No 24
>3tl1_A WHIE ORF VI, polyketide cyclase; helix-GRIP fold, polyketide C9-C14 aromatase/cyclase, linear beta-ketone intermediate; HET: JRO; 1.80A {Streptomyces coelicolor} PDB: 3tvr_A 2kf2_A
Probab=98.25 E-value=6.8e-05 Score=48.74 Aligned_cols=48 Identities=8% Similarity=0.259 Sum_probs=41.3
Q ss_pred EeeCCCCEEEEEEE-ecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCC
Q 039477 12 AIDNENYITNYKVI-EGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNED 65 (92)
Q Consensus 12 ~~D~~~~~~~y~i~-eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~ 65 (92)
.+|+..++++|+.+ +| |++++.++.+|.|.++ ||.|+|..+|+..++.
T Consensus 70 ~~d~~~~~I~~~~~~~g----Pf~~l~g~W~f~p~~~--gt~V~~~~df~~~~~~ 118 (159)
T 3tl1_A 70 VADPVTRTVRAQRVETG----PFQYMNIVWEYAETAE--GTVMRWTQDFAMKPDA 118 (159)
T ss_dssp EEETTTTEEEEEESSCT----TEEEEEEEEEEEEETT--EEEEEEEEEEEECTTC
T ss_pred EEcCCCCEEEEEEccCC----ChhhccCEEEEEECCC--CEEEEEEEEEEecCCC
Confidence 48999999999987 55 6899999999999865 6999999999987653
No 25
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=98.21 E-value=5.3e-05 Score=49.77 Aligned_cols=48 Identities=10% Similarity=0.194 Sum_probs=40.1
Q ss_pred EeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCC
Q 039477 12 AIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNE 64 (92)
Q Consensus 12 ~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~ 64 (92)
.+|+..++++|+.++++ |++.|.++.+|.|.++ ||.|+|+.+|+..++
T Consensus 70 ~~d~~~~~I~~~~l~~g---Pf~~~~g~W~f~p~~~--gt~V~~~~df~~~~~ 117 (169)
T 3tvq_A 70 VPDKGSRTVRAHRVETG---PFAYMNLHWTYRAVAG--GTEMRWVQEFDMKPG 117 (169)
T ss_dssp EEEGGGTEEEEEESSCT---TEEEEEEEEEEEEETT--EEEEEEEEEEEECTT
T ss_pred EEcCCCcEEEEEEcCCC---ChhheeeEEEEEECCC--CEEEEEEEEEEecCC
Confidence 37899999999876442 6889999999999865 499999999998755
No 26
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=98.16 E-value=0.00013 Score=47.37 Aligned_cols=50 Identities=8% Similarity=0.169 Sum_probs=43.4
Q ss_pred EeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCC
Q 039477 12 AIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNE 64 (92)
Q Consensus 12 ~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~ 64 (92)
.+|+..+++.|++++++. +++.+..+.+|.|.+++ +|.|+|+.+|+..+.
T Consensus 70 ~~~~~~~~i~~~~~~~~g--pf~~~~g~w~f~~~~~~-~t~V~~~~~~~~~~~ 119 (172)
T 3tfz_A 70 DLDPARRVIAYRQLETAP--IVGHMSGEWRAFTLDAE-RTQLVLTHDFVTRAA 119 (172)
T ss_dssp EEETTTTEEEEEEEECCT--TEEEEEEEEEEEEEETT-EEEEEEEEEEEECCC
T ss_pred EEeCCCCEEEEEEeeCCC--ChhhcEEEEEEEECCCC-cEEEEEEEEEEEcCh
Confidence 378889999999998665 78999999999998766 899999999997654
No 27
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=97.92 E-value=0.00088 Score=40.53 Aligned_cols=51 Identities=25% Similarity=0.313 Sum_probs=39.5
Q ss_pred EEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCC
Q 039477 7 KEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNE 64 (92)
Q Consensus 7 kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~ 64 (92)
..++. .++.++.+.|++.+|++ ..+..+++|.|.++ ||.++|+.+|+..+.
T Consensus 63 ~~~~~-~~~~~~~i~~~~~~g~~----~~~~~~~~~~~~~~--gT~v~~~~~~~~~~~ 113 (147)
T 2d4r_A 63 LEEEE-WDDENLRNRFFSPEGDF----DRYEGTWVFLPEGE--GTRVVLTLTYELTIP 113 (147)
T ss_dssp EEEEE-EETTTTEEEEEEEEESC----SEEEEEEEEEECSS--SEEEEEEEEEECCCT
T ss_pred EEEEE-EcCCCcEEEEEeccCCh----hheEEEEEEEECCC--CcEEEEEEEEecCCc
Confidence 34444 45788999999998854 56788999999764 599999999997653
No 28
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=97.89 E-value=0.00043 Score=44.53 Aligned_cols=47 Identities=17% Similarity=0.154 Sum_probs=40.2
Q ss_pred eeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcC
Q 039477 13 IDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLN 63 (92)
Q Consensus 13 ~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~ 63 (92)
+|++++++.+++++|++ .++..++.+|.|.++| +|.|+|+++|+...
T Consensus 74 ~~~~~~~I~~~~~~g~~---~~~l~g~w~f~p~~~g-~t~V~~~~~~e~~~ 120 (161)
T 3p9v_A 74 ADKEAGKITWSPIKGEG---NGVVSGSWTLSAKGDN-ATAVKFQTSAELTV 120 (161)
T ss_dssp EETTTTEEEEEECTTST---TEEEEEEEEEEESSSS-CEEEEEEEEEEEEE
T ss_pred EcCCCCEEEEEEecCcc---ceeEEEEEEEEECCCC-eEEEEEEEEEEEcC
Confidence 67778999999998865 3778889999998776 79999999999874
No 29
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=97.00 E-value=0.0045 Score=38.62 Aligned_cols=50 Identities=12% Similarity=0.304 Sum_probs=40.0
Q ss_pred EEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcC
Q 039477 7 KEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLN 63 (92)
Q Consensus 7 kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~ 63 (92)
.-|+. +|+.++++.+++++| +++.+.++.+|.|.++ +|.|+++++|+..+
T Consensus 67 ~~~v~-~~~~~~~i~~~~~~G----~f~~~~g~w~f~~~~~--gt~v~~~~~~~~~~ 116 (148)
T 1t17_A 67 ATRVR-RDKDARSIDVSLLYG----PFKRLNNGWRFMPEGD--ATRVEFVIEFAFKS 116 (148)
T ss_dssp EEEEE-EETTTCEEEEEESST----TSSCEEEEEEEEEETT--EEEEEEEEEECCSC
T ss_pred EEEEE-EcCCCcEEEEEECCC----ChhccEEEEEEEECCC--CeEEEEEEEEEECc
Confidence 44555 577777999999998 3567889999999865 49999999999763
No 30
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=96.98 E-value=0.026 Score=35.38 Aligned_cols=78 Identities=13% Similarity=0.153 Sum_probs=46.6
Q ss_pred EEEEeeCCCCEEEEEEEe-cccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhH-----HHHHHHHHHH
Q 039477 9 IIEAIDNENYITNYKVIE-GNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGK-----LQILIDVAKD 82 (92)
Q Consensus 9 rl~~~D~~~~~~~y~i~e-g~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~-----~~~~~~~~k~ 82 (92)
++..+|+. ++++++... |.. +......+++|.|.+++ +|.++|+++++..+.-......+ ...+..++++
T Consensus 66 ~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~-gT~v~~~~~~~~~g~l~~~~~~l~~~~~~~~~~~~~~~ 141 (162)
T 2pcs_A 66 EVTDIKPP-YHYKLLVNGEGGP--GFVNAEGVIDLTPINDE-CTQLTYTYSAEVGGKVAAIGQRMLGGVAKLLISDFFKK 141 (162)
T ss_dssp EEEEEETT-TEEEEEEEEEETT--EEEEEEEEEEEEESSSS-EEEEEEEEEEEEESGGGGGCHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCC-cEEEEEEEecCCC--ccEEEEEEEEEEecCCC-cEEEEEEEEEEECCCHHHhhHHHHHHHHHHHHHHHHHH
Confidence 55556654 566666542 222 45567889999985555 89999999999765321112222 2233456677
Q ss_pred HHHHHhcC
Q 039477 83 IDAHLLSQ 90 (92)
Q Consensus 83 ie~~l~~~ 90 (92)
+.++|.+.
T Consensus 142 lk~~~e~~ 149 (162)
T 2pcs_A 142 IQKEIAKS 149 (162)
T ss_dssp HHHHHHHC
T ss_pred HHHHhccc
Confidence 77766543
No 31
>3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} SCOP: d.129.3.9 PDB: 2b79_A
Probab=96.89 E-value=0.011 Score=37.89 Aligned_cols=49 Identities=0% Similarity=-0.107 Sum_probs=36.3
Q ss_pred eEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEE
Q 039477 5 IAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYE 60 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye 60 (92)
.+..+|+.+|+.. .++|... + ++..+..+.++.|.++| +|+|+|+.+|.
T Consensus 74 ~~~~~v~~~~p~~-~~~~~~~---~--p~~~~~~~h~l~p~~~g-gTrvt~~~~~~ 122 (155)
T 3ijt_A 74 ELAFTLVEVRENQ-CFSDLTA---T--PFGNVLFEHEILENPDG-TISLRHSVSLT 122 (155)
T ss_dssp CEEEEECCCBTTT-EEEEEEE---E--TTEEEEEEEEEEECTTS-CEEEEEEEEES
T ss_pred cEEEEEEEEeCCc-EEEEEEe---c--CCeEEEEEEEEEEcCCC-cEEEEEEEEEE
Confidence 4677899887655 5888643 3 44466777788887666 89999999993
No 32
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=96.66 E-value=0.035 Score=34.99 Aligned_cols=53 Identities=15% Similarity=0.117 Sum_probs=36.7
Q ss_pred EEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcC
Q 039477 6 AKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLN 63 (92)
Q Consensus 6 ~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~ 63 (92)
..-++..+ ..++.+.|+..+|+. ..+..+++|.|.+++++|.|+++++|++.+
T Consensus 62 ~~~~v~e~-~p~~~i~~~~~~g~~----~~~~g~~~F~~~~~~~gT~V~~~~~~~~~~ 114 (155)
T 3ggn_A 62 WEAELTAD-EPGKRIAWRSLPGAR----IENSGEVLFRPAPGARGTEVVVRLTYRPPG 114 (155)
T ss_dssp EEEEEEEE-ETTTEEEEEECTTCS----SCEEEEEEEEECSSSSCEEEEEEEEEC---
T ss_pred EEEEEEEe-cCCCEEEEEECCCCC----cceEEEEEEEECCCCCceEEEEEEEEECCC
Confidence 34455544 467889999998853 346778889887423389999999999865
No 33
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=96.50 E-value=0.063 Score=33.10 Aligned_cols=51 Identities=22% Similarity=0.260 Sum_probs=33.9
Q ss_pred EEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcC
Q 039477 9 IIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLN 63 (92)
Q Consensus 9 rl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~ 63 (92)
++..+++ .+++.|+....+...+++ +..++++.|.+ + +|.++|+.+|+..+
T Consensus 75 ~~~~~~~-~~~i~~~~~~~~~~~~~~-~~~~~~l~~~~-~-gT~v~~~~~~~~~g 125 (157)
T 2ns9_A 75 SFEDLEK-PSKATVKGSGRGAGSTLD-FTLRFAVEPSG-G-GSRVSWVFEGNVGG 125 (157)
T ss_dssp EEEEEET-TTEEEEEEEEECSSEEEE-EEEEEEEEEET-T-EEEEEEEEEEEEEE
T ss_pred EEEecCC-CcEEEEEEEecCCCccEE-EEEEEEEEeCC-C-cEEEEEEEEEEECc
Confidence 4446664 567777653322111343 67899999976 4 89999999998654
No 34
>1z94_A Conserved hypothetical protein; NESG, CV1439, structural genomics, PSI structure initiative; 2.10A {Chromobacterium violaceum} SCOP: d.129.3.5
Probab=94.80 E-value=0.35 Score=29.20 Aligned_cols=79 Identities=11% Similarity=-0.057 Sum_probs=50.9
Q ss_pred eEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHHHHHH
Q 039477 5 IAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVAKDID 84 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~k~ie 84 (92)
...-++..+++ ++.+.|+...++.. .-.....++++.|.+ + +|.++|+.++.+.. ............++..|.
T Consensus 66 ~~~~~v~~~~p-~~~l~~~~~~~~~~-~~~~~~~~~~l~~~~-~-gT~l~~~~~~~~~~---~~~~~~~~gw~~~L~~L~ 138 (147)
T 1z94_A 66 AFGGRYLELVP-GERIRYTDRFDDAG-LPGDMITTITLAPLS-C-GADLSIVQEGIPDA---IPPENCYLGWQQSLKQLA 138 (147)
T ss_dssp EEEEEEEEEET-TTEEEEEEEESCCC----CEEEEEEEEEET-T-EEEEEEEEECCCTT---SCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEcC-CCEEEEEEEEeCCC-CCCcEEEEEEEEecC-C-CEEEEEEEEcCCch---hhHHHHHHHHHHHHHHHH
Confidence 45667888874 67888887655321 111356788888875 3 79999998875321 123344455667888888
Q ss_pred HHHhcC
Q 039477 85 AHLLSQ 90 (92)
Q Consensus 85 ~~l~~~ 90 (92)
++|-+.
T Consensus 139 ~~le~~ 144 (147)
T 1z94_A 139 ALVEPD 144 (147)
T ss_dssp HHHSCC
T ss_pred HHHHhh
Confidence 887654
No 35
>1xn6_A Hypothetical protein BC4709; structural genomics, protein structure initiative, PSI, NESG target protein BCR68, alpha + beta; NMR {Bacillus cereus} SCOP: d.129.3.5
Probab=94.69 E-value=0.3 Score=29.78 Aligned_cols=46 Identities=9% Similarity=-0.000 Sum_probs=33.3
Q ss_pred EEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEE
Q 039477 7 KEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEK 61 (92)
Q Consensus 7 kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~ 61 (92)
.-++..+++ .+.+.|+...+ ....+++|.|.++| +|+++++....+
T Consensus 60 ~~~v~e~~p-~~~l~~~~~~~-------~~~~~~~l~~~~~g-~T~l~~~~~~~~ 105 (143)
T 1xn6_A 60 PCKVLEIDE-PNHLSFSWDTD-------GWVVSFDLKDLGDN-KTEFTLIHGGWK 105 (143)
T ss_dssp CEEEEEEET-TTEEEEEETTT-------TEEEEEEEEEEETT-EEEEEEEEECCC
T ss_pred eEEEEEEeC-CCEEEEEEeCC-------CEEEEEEEEECCCC-cEEEEEEEEccC
Confidence 457788876 66788887544 35678888898765 799998887443
No 36
>1xuv_A Hypothetical protein MM0500; alpha-beta protein, northeast structural genomics consortium, NESG, structural genomics; 2.10A {Methanosarcina mazei GO1} SCOP: d.129.3.5
Probab=94.57 E-value=0.51 Score=30.08 Aligned_cols=79 Identities=13% Similarity=0.035 Sum_probs=47.2
Q ss_pred eEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHH-----HHHHHH
Q 039477 5 IAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKL-----QILIDV 79 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~-----~~~~~~ 79 (92)
...-++..+++ .+.+.|+...++....-.....+++|.|.+++ +|.++|+..|... ...+... ..+..+
T Consensus 84 ~~~~~v~e~~p-~~rl~~~~~~~~~~~~~~~~~v~~~l~~~~~g-gT~lt~~~~~~~~----~~~~~~~~~~~~~Gw~~~ 157 (178)
T 1xuv_A 84 AFHGVNHDVTE-PERIISTFEFEGLPEKGHVILDTARFEALPGD-RTKLTSHSVFQTI----EDRDGMLQSGMEEGINDS 157 (178)
T ss_dssp EEEEEEEEEET-TTEEEEEEEETTSSSSCCCEEEEEEEEEETTT-EEEEEEEEECSSH----HHHHHHHHTTHHHHHHHH
T ss_pred EEEEEEEEEeC-CCEEEEEEEecCCCCCCCcEEEEEEEEEcCCC-CEEEEEEEEeCCH----HHHHHHHHHhHHHHHHHH
Confidence 35667788874 56778877544321001246778888898655 8999999885211 0112221 345567
Q ss_pred HHHHHHHHhc
Q 039477 80 AKDIDAHLLS 89 (92)
Q Consensus 80 ~k~ie~~l~~ 89 (92)
+..|.++|-+
T Consensus 158 L~~Lk~~le~ 167 (178)
T 1xuv_A 158 YERLDELLEK 167 (178)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7777777643
No 37
>2il5_A Hypothetical protein; structural genomics, APC23650, PSI-2, structure initiative; 2.30A {Staphylococcus aureus subsp} SCOP: d.129.3.5
Probab=94.28 E-value=0.56 Score=29.39 Aligned_cols=81 Identities=9% Similarity=0.010 Sum_probs=48.6
Q ss_pred eEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCC-CCC----------ChhhHH
Q 039477 5 IAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNE-DVP----------DPTGKL 73 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~-~~~----------~~~~~~ 73 (92)
...-++..++ ..+.+.|+...++. +-.....++++.|.++| +|.++++.+..+..+ ... ..+...
T Consensus 76 ~~~~~v~e~~-p~~rl~~~~~~~~~--~~~~~~~~~~l~~~~~g-~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (171)
T 2il5_A 76 VIEGIYESLV-MDEYVKMTIGMPGL--SETQDVIEVEFFERETG-GTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMV 151 (171)
T ss_dssp EEEEEEEEEE-TTTEEEEEESCC----CCCCEEEEEEEEECSSS-SEEEEEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEc-CCCEEEEEEEecCC--CCCcEEEEEEEEECCCC-CEEEEEEEEeccCcccccccchhccchhHHHHHHH
Confidence 3556778786 56778888765443 22246778888898765 799999987544311 000 111223
Q ss_pred HHHHHHHHHHHHHHhc
Q 039477 74 QILIDVAKDIDAHLLS 89 (92)
Q Consensus 74 ~~~~~~~k~ie~~l~~ 89 (92)
..+..++..|.++|-+
T Consensus 152 ~Gw~~~L~~L~~~le~ 167 (171)
T 2il5_A 152 HGFELMFDKMYHVIET 167 (171)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhh
Confidence 3445677888887754
No 38
>2leq_A Uncharacterized protein; start domains, structural genomics, PSI-biology, protein STR initiative; NMR {Cytophaga hutchinsonii}
Probab=93.89 E-value=0.57 Score=28.05 Aligned_cols=79 Identities=11% Similarity=0.050 Sum_probs=47.2
Q ss_pred eEEEEEEEeeCCCCEEEEEEEec--ccc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHHH
Q 039477 5 IAKEIIEAIDNENYITNYKVIEG--NLL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVAK 81 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~eg--~~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~k 81 (92)
.+.-++..+++ ++.+.|+.... ++. .+-.....+++|.|.++ +|.++|+.+..+.. .........+..++.
T Consensus 61 ~~~~~v~~~~p-~~~l~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~--gT~l~~~~~~~~~~---~~~~~~~~gw~~~l~ 134 (146)
T 2leq_A 61 EDKGTILQFNE-RSILQYSHFSPLTGKPDLPENYHVVTITLTALKK--GVEVELTQDNNETE---KEQKHSEDNWNTMLE 134 (146)
T ss_dssp EEEEEEEEEET-TTEEEEECBCGGGCCCSCGGGSCEEEEEEEECSS--CEEEEEEEEEESSH---HHHHHHHHHHHHHHH
T ss_pred cccEEEEEEcC-CCEEEEEEccCccCCCCCCCCceEEEEEEEEcCC--CeEEEEEEecCCch---hhHhhHHhhHHHHHH
Confidence 45677888875 67788877532 110 01224677888888743 79999997644321 112222344556777
Q ss_pred HHHHHHhc
Q 039477 82 DIDAHLLS 89 (92)
Q Consensus 82 ~ie~~l~~ 89 (92)
.|.++|-+
T Consensus 135 ~Lk~~le~ 142 (146)
T 2leq_A 135 GLKKFLEN 142 (146)
T ss_dssp HHHHHHGG
T ss_pred HHHHHHhc
Confidence 88777754
No 39
>3put_A Hypothetical conserved protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.83A {Rhizobium etli cfn 42} PDB: 3otl_A*
Probab=92.97 E-value=1.1 Score=28.39 Aligned_cols=81 Identities=14% Similarity=0.011 Sum_probs=51.4
Q ss_pred eEEEEEEEeeCCCCEEEEEEEe--cccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHHHH
Q 039477 5 IAKEIIEAIDNENYITNYKVIE--GNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVAKD 82 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~e--g~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~k~ 82 (92)
.+.-++.++++ .+.+.|+..- ++. +...-..+++|.|.+ + +|.++.+-..-..++. .......+....++..
T Consensus 72 ~~~g~v~ev~p-~~rlv~t~~~~~~~~--~~~~s~vt~~l~~~~-~-gT~ltl~~~~~~~~~~-~~~~~~~~GW~~~L~~ 145 (166)
T 3put_A 72 AYDARYIDIVP-DTRIIYAYEMKLGQT--RISASLVTVAFDVEP-S-GTRMVFTEQVVFLDGY-GDNGARLQGTEIGLDN 145 (166)
T ss_dssp EEEEEEEEEET-TTEEEEEEEEEETTE--EEEEEEEEEEEEECS-S-SEEEEEEEEEEEETTC-CCTTHHHHHHHHHHHH
T ss_pred EEEEEEEEEcC-CcEEEEEEEecCCCC--CCCceEEEEEEEECC-C-CEEEEEEEEecCccch-hhHHHHHHHHHHHHHH
Confidence 35667888875 5556666542 222 333456788888875 3 7999999887644321 2334555667778889
Q ss_pred HHHHHhcCC
Q 039477 83 IDAHLLSQQ 91 (92)
Q Consensus 83 ie~~l~~~~ 91 (92)
|++||-...
T Consensus 146 L~~~le~~~ 154 (166)
T 3put_A 146 LELFLVRET 154 (166)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHhcCC
Confidence 998886543
No 40
>3rd6_A MLL3558 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.80A {Mesorhizobium loti}
Probab=90.17 E-value=2.2 Score=26.55 Aligned_cols=79 Identities=13% Similarity=0.103 Sum_probs=49.3
Q ss_pred eEEEEEEEeeCCCCEEEEEEEe--cccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHHHH
Q 039477 5 IAKEIIEAIDNENYITNYKVIE--GNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVAKD 82 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~e--g~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~k~ 82 (92)
.+.=++.++++ .+.+.|+..- .+. +...-..+++|.|.++ ||.++++...-..++. ...+...+....++..
T Consensus 71 ~~~g~v~e~~p-~~rl~~~~~~~~~~~--~~~~s~v~~~l~~~~~--gT~lt~~~~~~~~~~~-~~~~~~~~GW~~~L~~ 144 (161)
T 3rd6_A 71 RLDAQFQDIVP-DQRIVFSYRMAIGPQ--PMSASLTTVELTPSGD--GTRLTYTEQGAFFDGV-DSAKGREEGTRGLLEA 144 (161)
T ss_dssp EEEEEEEEEET-TTEEEEEEEEEETTE--EEEEEEEEEEEEEETT--EEEEEEEEEEEEETTC-CCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEcC-CCEEEEEEEecCCCC--CCCceEEEEEEEECCC--CEEEEEEEEecCcchh-hhHHHHHHHHHHHHHH
Confidence 45667788875 4556666542 222 3344567888888753 7999999887543321 2344555666778888
Q ss_pred HHHHHhc
Q 039477 83 IDAHLLS 89 (92)
Q Consensus 83 ie~~l~~ 89 (92)
|++||..
T Consensus 145 L~~~le~ 151 (161)
T 3rd6_A 145 LAAELQK 151 (161)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 8887743
No 41
>2lak_A AHSA1-like protein RHE_CH02687; NESG, structural genomics, northeast structural genomics CON PSI-biology, structure genomics, unknown function; NMR {Rhizobium etli}
Probab=89.47 E-value=1.1 Score=27.83 Aligned_cols=78 Identities=6% Similarity=-0.086 Sum_probs=45.5
Q ss_pred EEEEEEeeCCCCEEEEEEEecccc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHHHHHHH
Q 039477 7 KEIIEAIDNENYITNYKVIEGNLL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVAKDIDA 85 (92)
Q Consensus 7 kErl~~~D~~~~~~~y~i~eg~~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~k~ie~ 85 (92)
.-++.++++ ++.+.|+...++.. .+-.....+++|.|.++ +|.++|+.+-.+. ....+.....+..++..|.+
T Consensus 63 ~~~v~e~~p-~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~--gT~l~~~~~~~~~---~~~~~~~~~gw~~~L~~Lk~ 136 (160)
T 2lak_A 63 RGSFREVVP-VHRLAYSFGWDGSEVVPPGSSLVEIDLIEQGG--GTLLRLTHSGLPS---AEQCAGHEEGWAHYLGRLTE 136 (160)
T ss_dssp SCCEEEEET-TTEEEECCCCCSSSCCCTTSCEEEEEEEECSS--SEEEEEEEECCCS---HHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcC-CCEEEEEEEecCCCCCCCCcEEEEEEEEECCC--CEEEEEEEeCCCC---HHHHHHHHHHHHHHHHHHHH
Confidence 346777765 66788876543210 01224677888888753 7999998762111 00122223455577788888
Q ss_pred HHhcC
Q 039477 86 HLLSQ 90 (92)
Q Consensus 86 ~l~~~ 90 (92)
+|-+.
T Consensus 137 ~le~~ 141 (160)
T 2lak_A 137 VAAGR 141 (160)
T ss_dssp HHHCS
T ss_pred HHhcC
Confidence 87654
No 42
>3q64_A MLL3774 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.50A {Mesorhizobium loti}
Probab=89.39 E-value=2.6 Score=26.24 Aligned_cols=78 Identities=13% Similarity=0.023 Sum_probs=48.9
Q ss_pred eEEEEEEEeeCCCCEEEEEEEe--cccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHHHH
Q 039477 5 IAKEIIEAIDNENYITNYKVIE--GNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVAKD 82 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~e--g~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~k~ 82 (92)
.+.=++.++++ .+.+.|+..- .+. +...-..+++|.|.++ ||+++++-..-..++ ....+...+....++..
T Consensus 72 ~~~g~v~e~~p-~~rl~~~~~~~~~~~--~~~~s~v~~~l~~~~~--gT~lt~~~~~~~~~~-~~~~~~~~~GW~~~L~~ 145 (162)
T 3q64_A 72 VYTATYQDIVP-DQRIVYSYDMLFGET--RISVSLATIQLFAEGE--GTRLVLTEQGAFLDG-HDTPSTREHGTGVLLDL 145 (162)
T ss_dssp EEEEEEEEEET-TTEEEEEEEEEETTE--EEEEEEEEEEEEEETT--EEEEEEEEEEEEETT-SSCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEcC-CCEEEEEEEecCCCC--CCCceEEEEEEEEcCC--CEEEEEEEEecCccc-hhHHHHHHHHHHHHHHH
Confidence 45667788864 5566666542 222 2344567888888754 799999988654332 12344555666677777
Q ss_pred HHHHHh
Q 039477 83 IDAHLL 88 (92)
Q Consensus 83 ie~~l~ 88 (92)
|++||.
T Consensus 146 L~~~le 151 (162)
T 3q64_A 146 LDAFLD 151 (162)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 877764
No 43
>2lcg_A Uncharacterized protein; start domain, structural genomics, northeast structural GENO consortium, NESG, unknown function, AHSA1; NMR {Ralstonia metallidurans}
Probab=88.31 E-value=2.9 Score=25.28 Aligned_cols=70 Identities=14% Similarity=0.022 Sum_probs=45.4
Q ss_pred eEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHHHHHH
Q 039477 5 IAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVAKDID 84 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~k~ie 84 (92)
.+.-++..+++ .+.+.|+.- + ...++++.|.+ + +|.++++..+. .....+........++..|+
T Consensus 65 ~~~~~v~~~~p-~~~l~~~~~------g---~~~~~~l~~~~-~-gT~l~~~~~~~----~~~~~~~~~~Gw~~~L~~L~ 128 (142)
T 2lcg_A 65 DFAGTYTKVVE-NKRIEYAFG------D---RTAKVEFLEAP-Q-GVTVRVSFVAE----TEYPVEQQQQGWQAILNNFK 128 (142)
T ss_dssp EEEEEEEEEET-TTEEEEEET------T---EEEEEEEEEET-T-EEEEEEEEECC----SSSCHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEEcC-CCEEEEEcC------C---CEEEEEEEEcC-C-CEEEEEEEecC----CHHHHHHHHHHHHHHHHHHH
Confidence 34556777764 667777751 2 56778888875 3 79999987752 11234444555667788888
Q ss_pred HHHhcC
Q 039477 85 AHLLSQ 90 (92)
Q Consensus 85 ~~l~~~ 90 (92)
++|-..
T Consensus 129 ~~le~~ 134 (142)
T 2lcg_A 129 RHVESH 134 (142)
T ss_dssp HHHHHS
T ss_pred HHHHHH
Confidence 887654
No 44
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=87.49 E-value=1.7 Score=27.71 Aligned_cols=52 Identities=15% Similarity=0.222 Sum_probs=36.6
Q ss_pred eeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhH-----HHHHHHHHHHHHHHHhc
Q 039477 33 YKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGK-----LQILIDVAKDIDAHLLS 89 (92)
Q Consensus 33 ~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~-----~~~~~~~~k~ie~~l~~ 89 (92)
...+.+...+.| +++ +|.+.+....++.+. . |..+ ......++++|.+++.+
T Consensus 123 ~~~~~~~~~i~p-~~~-~t~vt~~~~~dp~G~-i--P~~lvn~~~~~~~~~~l~~L~k~~~~ 179 (189)
T 3qsz_A 123 IPRAKGQWTLVP-DAD-GVDVTYQMHASPGGS-I--PSWLANQTVVETPFGTLKALRSHLRQ 179 (189)
T ss_dssp CCCEEEEEEEEE-CSS-SEEEEEEEEECSCSS-S--CHHHHHHTTTHHHHHHHHHHHHHHTC
T ss_pred eeEeeEEEEEEE-CCC-eEEEEEEEEeCCCCC-C--CHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 567888899999 665 899999999998753 2 3333 33445677777776653
No 45
>3q6a_A Uncharacterized protein; structural genomics, PSI-biology; 1.80A {Staphylococcus saprophyticus subsp}
Probab=86.58 E-value=3.6 Score=24.59 Aligned_cols=66 Identities=15% Similarity=0.129 Sum_probs=40.8
Q ss_pred EEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChh---hHHHHHHHHHHHHHH
Q 039477 9 IIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPT---GKLQILIDVAKDIDA 85 (92)
Q Consensus 9 rl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~---~~~~~~~~~~k~ie~ 85 (92)
++..+++ ++.+.|+..+| ..++++.|.+ + +|.++++-...+.. +.. ........++..|.+
T Consensus 58 ~v~~~~p-~~~l~~~~~~g---------~~~~~l~~~~-~-gT~l~~~~~~~~~~----~~~~~~~~~~GW~~~l~~L~~ 121 (135)
T 3q6a_A 58 NIERVED-NQLIAFTWGAH---------PITIQFEESE-A-GTVVTTTEKDFDTQ----DVKQLLGQKEGWVYMLSCLKV 121 (135)
T ss_dssp EEEEEET-TTEEEEEETTE---------EEEEEEEEET-T-EEEEEEEECCCCSS----CHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcC-CCEEEEEEcCC---------eEEEEEEECC-C-CEEEEEEEcCCCcc----hHHHHhhchhCHHHHHHHHHH
Confidence 5666654 46677776532 6788888864 3 79998885532211 112 234455677888888
Q ss_pred HHhcC
Q 039477 86 HLLSQ 90 (92)
Q Consensus 86 ~l~~~ 90 (92)
||-..
T Consensus 122 ~le~g 126 (135)
T 3q6a_A 122 YLEHG 126 (135)
T ss_dssp HHHHS
T ss_pred HHhcC
Confidence 87653
No 46
>3pu2_A Uncharacterized protein; SRPBCC superfamily, PSI-biology, NESG, RHR263, structural GE protein structure initiative; HET: MSE; 2.61A {Rhodobacter sphaeroides}
Probab=83.65 E-value=5.4 Score=24.90 Aligned_cols=75 Identities=11% Similarity=0.029 Sum_probs=45.2
Q ss_pred eEEEEEEEeeCCCCEEEEEEE--ecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhh-----HHHHHH
Q 039477 5 IAKEIIEAIDNENYITNYKVI--EGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTG-----KLQILI 77 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~--eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~-----~~~~~~ 77 (92)
.+.-++..+++ .+.+.|+.. ++.. + ..-..+++|.|.++ ||.++++-.|.. ....+. ..+...
T Consensus 75 ~~~g~v~e~~p-~~rl~~t~~~~~~~~--~-~~s~vt~~l~~~~~--gT~l~l~~~~~~----~~~~~~~~~~~~~~GW~ 144 (164)
T 3pu2_A 75 GLTGRVILAEP-PHRLIHSELYDEDWT--G-GETLVTLQLLPVEG--GTELAMAVDYAT----PEARDAVAASAMATEME 144 (164)
T ss_dssp EEEEEEEEEET-TTEEEEEEBCC---C--C-SCEEEEEEEEEETT--EEEEEEEEECSS----TTHHHHHHTSTHHHHHH
T ss_pred EEEEEEEEEcC-CCEEEEEEeccCCCC--C-CCEEEEEEEEEcCC--CEEEEEEEEeCC----HHHHHHHHHhhHHHHHH
Confidence 45567777764 566777664 2112 1 12567888888753 799999888531 111221 234566
Q ss_pred HHHHHHHHHHhc
Q 039477 78 DVAKDIDAHLLS 89 (92)
Q Consensus 78 ~~~k~ie~~l~~ 89 (92)
.++..|+++|.+
T Consensus 145 ~~L~~L~~~l~~ 156 (164)
T 3pu2_A 145 EAYRHLDVMLAA 156 (164)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 788888888865
No 47
>2l8o_A Uncharacterized protein; mixed alpha-beta protein, PSI-biology, structural genomics, structure initiative; NMR {Cytophaga hutchinsonii}
Probab=83.00 E-value=5.9 Score=24.06 Aligned_cols=70 Identities=9% Similarity=0.053 Sum_probs=43.4
Q ss_pred EEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHHHHHHH
Q 039477 6 AKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVAKDIDA 85 (92)
Q Consensus 6 ~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~k~ie~ 85 (92)
+.-++..+++ .+.+.|+.. | ....+++|.|.+ + +|.++.+..+ ......+........++..|++
T Consensus 67 ~~g~v~e~~p-~~~l~~~~~-g-------~~~v~~~l~~~~-~-gT~l~~~~~~----~~~~~~~~~~~Gw~~~L~~L~~ 131 (144)
T 2l8o_A 67 FGGVYDQVKT-NDLIEYTIG-D-------GRKVRIVFTHTG-D-TTNIVESFDP----EETNPRELQQSGWQAILNSFKS 131 (144)
T ss_dssp EEEEEEEEET-TTEEEEEET-T-------CCEEEEEEEECS-S-SEEEEEEECC----CSSSCHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEeC-CCEEEEEeC-C-------CeEEEEEEEEcC-C-CEEEEEEEeC----CCHHHHHHHHHHHHHHHHHHHH
Confidence 4456666764 566777742 2 246678888865 4 7998888665 1112334444556677888888
Q ss_pred HHhcC
Q 039477 86 HLLSQ 90 (92)
Q Consensus 86 ~l~~~ 90 (92)
+|-..
T Consensus 132 ~le~~ 136 (144)
T 2l8o_A 132 YTENN 136 (144)
T ss_dssp HHGGG
T ss_pred HHHhH
Confidence 87653
No 48
>3uid_A Putative uncharacterized protein; SRPBCC superfamily, beta sandwich, function, structural genomics, TB structural genomics conso TBSGC; 1.57A {Mycobacterium smegmatis} SCOP: d.129.3.0
Probab=82.41 E-value=7.1 Score=24.55 Aligned_cols=79 Identities=14% Similarity=0.014 Sum_probs=46.3
Q ss_pred eEEEEEEEeeCCCCEEEEEEEe----cccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhh-----HHHH
Q 039477 5 IAKEIIEAIDNENYITNYKVIE----GNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTG-----KLQI 75 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~e----g~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~-----~~~~ 75 (92)
.+.-++..+++ .+.+.|+..- |........-..+++|.|.+ + ||+++.+..|... ...+. ..+.
T Consensus 75 ~~~g~~~ev~p-~~rlv~t~~~~~~~g~p~~~~~~s~vt~~l~~~~-~-gT~lt~~~~~~~~----~~~~~~~~~g~~~G 147 (168)
T 3uid_A 75 AGYWEITAVDE-PHSFSFLDGFADEDFNPNTDLPVSTNVYTFTEHD-G-GTRATYVGTYASA----EALQQVLDMGVIEG 147 (168)
T ss_dssp EEEEEEEEEET-TTEEEEEEEEECTTSCBCSSCCCEEEEEEEEEET-T-EEEEEEEEECSCH----HHHHHHHHTTHHHH
T ss_pred eeEEEEEEEeC-CcEEEEEEeeccCCCCcCCCCCcEEEEEEEEECC-C-CEEEEEEEecCCH----HHHHHHHHhcHHHH
Confidence 35667788875 5556666532 21211112356788888875 4 7999998643211 11121 2345
Q ss_pred HHHHHHHHHHHHhcC
Q 039477 76 LIDVAKDIDAHLLSQ 90 (92)
Q Consensus 76 ~~~~~k~ie~~l~~~ 90 (92)
...++..|++||.+.
T Consensus 148 W~~~L~~L~~~l~~~ 162 (168)
T 3uid_A 148 ASSAINQIDALLTAT 162 (168)
T ss_dssp HHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHHhh
Confidence 567889999988764
No 49
>3eli_A AHSA1, AHA1 domain protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} SCOP: d.129.3.5
Probab=78.37 E-value=9 Score=23.28 Aligned_cols=78 Identities=8% Similarity=-0.068 Sum_probs=43.1
Q ss_pred eEEEEEEEeeCCCCEEEEEEEecccc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHHHHH
Q 039477 5 IAKEIIEAIDNENYITNYKVIEGNLL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVAKDI 83 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~eg~~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~k~i 83 (92)
.+.-++.++++ .+.+.|+....+.. .+-.....+++|.|.++ ||.++++-. .... ....+...+....++..|
T Consensus 66 ~~~g~v~e~~p-~~~l~~~~~~~~~~~~~~~~~~v~~~l~~~~~--gT~l~l~~~--~~~~-~~~~~~~~~GW~~~L~~L 139 (152)
T 3eli_A 66 KVSGQVTHVKP-PQSVGFTWGWHDDDDRRGAESHVMFIVEPCAK--GARLILDHR--ELGD-DEMSLRHEEGWTSSLRKL 139 (152)
T ss_dssp EEEEEEEEEET-TTEEEEEEEEECTTSCEEEEEEEEEECCBC----CEEEEEEEE--SCSC-HHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEcC-CCEEEEEEeecCCCCCCCCcEEEEEEEEECCC--CEEEEEEEc--cCCC-HHHHHHHHHHHHHHHHHH
Confidence 45667788875 56677776543221 12234566788878653 688887643 1111 001223344556788888
Q ss_pred HHHHh
Q 039477 84 DAHLL 88 (92)
Q Consensus 84 e~~l~ 88 (92)
++||.
T Consensus 140 ~~~l~ 144 (152)
T 3eli_A 140 AAELA 144 (152)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88874
No 50
>1xn5_A BH1534 unknown conserved protein; structural genomics, protein structure initiative, PSI, BACI halodurans protein BH1534, alpha + beta; NMR {Bacillus halodurans} SCOP: d.129.3.5
Probab=77.69 E-value=6.5 Score=23.82 Aligned_cols=43 Identities=12% Similarity=0.234 Sum_probs=29.2
Q ss_pred EEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEE
Q 039477 6 AKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFE 58 (92)
Q Consensus 6 ~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ 58 (92)
+.-++..+++ .+.+.|+... .....+++|.|.++ ||.++++..
T Consensus 56 ~~~~v~e~~p-~~~l~~~~~~-------~~~~~~~~l~~~~~--gT~l~~~~~ 98 (146)
T 1xn5_A 56 SPCQVTDVER-PIKLSFTWDT-------DGWSVTFHLKEEEN--GTIFTIVHS 98 (146)
T ss_dssp EEEEEEEEET-TTEEEEEETT-------TTEEEEEEEEECSS--SEEEEEEEE
T ss_pred eEEEEEEEeC-CcEEEEEEeC-------CCEEEEEEEEEcCC--CEEEEEEEE
Confidence 4567777875 5677777642 11456788888753 699988866
No 51
>1xfs_A NC_840354, conserved hypothetical protein; structural genomics, protein structure initiative, NESG, ALP protein, PSI; 1.70A {Nitrosomonas europaea} SCOP: d.129.3.5
Probab=76.15 E-value=12 Score=23.40 Aligned_cols=78 Identities=4% Similarity=-0.083 Sum_probs=43.2
Q ss_pred eEEEEEEEeeCCCCEEEEEEEeccccccee------------EEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhH
Q 039477 5 IAKEIIEAIDNENYITNYKVIEGNLLELYK------------SFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGK 72 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~eg~~~~~~~------------~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~ 72 (92)
...-++..+++ .+.+.|+..-++-..+.. ....+++|.|.+ + +|+++++..|... ...+..
T Consensus 72 ~~~~~v~e~~p-~~rl~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~-~-gT~l~~~~~~~~~----~~~~~~ 144 (178)
T 1xfs_A 72 PNSGCFLEVTD-EKRLIWTSALVKNYRPAVPATTSDKECAHIVMTAVIELQPTS-S-GTRYTACAMHNTP----GQRKLH 144 (178)
T ss_dssp EEEEEEEEEET-TTEEEEESSEEGGGEECCC-----------CCEEEEEEEECS-S-SEEEEEEEECSSH----HHHHHH
T ss_pred EEEEEEEEEeC-CCEEEEEEEEcCCCCccccccccccccccccEEEEEEEEECC-C-CEEEEEEEEcCCH----HHHHHH
Confidence 44567787874 566777764221000111 356788888875 3 7999999885211 011111
Q ss_pred -----HHHHHHHHHHHHHHHhc
Q 039477 73 -----LQILIDVAKDIDAHLLS 89 (92)
Q Consensus 73 -----~~~~~~~~k~ie~~l~~ 89 (92)
......++..|.++|-+
T Consensus 145 ~~~~~~~Gw~~~l~~L~~~le~ 166 (178)
T 1xfs_A 145 EEMGFHEGWGTTITQLEELLKQ 166 (178)
T ss_dssp HTTTHHHHHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHHHh
Confidence 23445667777777643
No 52
>2k5g_A Uncharacterized protein; structural genomiccs, protein structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} SCOP: d.129.3.5
Probab=75.51 E-value=7.1 Score=25.09 Aligned_cols=77 Identities=5% Similarity=-0.084 Sum_probs=44.3
Q ss_pred eEEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEE-EEEcCCCCCChhhHHHHHHHHHHHH
Q 039477 5 IAKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFE-YEKLNEDVPDPTGKLQILIDVAKDI 83 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~-ye~~~~~~~~~~~~~~~~~~~~k~i 83 (92)
.+.-++.+++ ..+.+.|+...++. + .....++++.|.++ ||.++.+-. |. + .............++..|
T Consensus 87 ~~~g~v~e~~-pp~rl~~~~~~~~~--~-~~~~v~~~l~~~~~--gT~l~~~~~~~~---~-~~~~~~~~~GW~~~L~~L 156 (191)
T 2k5g_A 87 VARHTLLRCE-PPRVLALTWGGGAG--E-APSEVLFELSEAGE--QVRLVLTHTRLA---D-RAAMLDVAGGWHAHLAVL 156 (191)
T ss_dssp EEEEEEEEEE-TTTEEEEECCCCSS--S-SCCEEEEEEEECSS--SEEEEEEEECCC---S-HHHHHHHTTTTTTHHHHH
T ss_pred eeEEEEEEec-CCCEEEEEeecCCC--C-CCEEEEEEEEEcCC--CEEEEEEEecCC---C-HHHHHHHHHhHHHHHHHH
Confidence 3566788887 46677777655432 1 12456788888753 698887766 32 1 001111122334577778
Q ss_pred HHHHhcCC
Q 039477 84 DAHLLSQQ 91 (92)
Q Consensus 84 e~~l~~~~ 91 (92)
.++|-..+
T Consensus 157 ~~~le~~~ 164 (191)
T 2k5g_A 157 AGKLAGQA 164 (191)
T ss_dssp HHHHHTSC
T ss_pred HHHHCCCC
Confidence 88776554
No 53
>3q63_A MLL2253 protein; structural genomics, PSI-biology, protein structure initiati alpha-beta protein, unknown, structure genomics; 2.00A {Mesorhizobium loti}
Probab=75.48 E-value=11 Score=22.96 Aligned_cols=79 Identities=11% Similarity=-0.010 Sum_probs=42.9
Q ss_pred EEEEEEEeeCCCCEEEEEEEecc--cccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHHHHH
Q 039477 6 AKEIIEAIDNENYITNYKVIEGN--LLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVAKDI 83 (92)
Q Consensus 6 ~kErl~~~D~~~~~~~y~i~eg~--~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~k~i 83 (92)
+.=++..+++ .+.+.|+...++ .. .-..-..+++|.|.++ ||.++++-..-+... ...-+........++..|
T Consensus 61 ~~g~v~e~~p-~~~l~~~~~~~~~~~~-~~~~s~v~~~l~~~~~--gT~l~l~~~g~~~~~-~~~~~~~~~GW~~~L~~L 135 (151)
T 3q63_A 61 LDCEVLAVEP-NKTLSYTWNLAHQDPA-FDLRSVVTFTLTPTPT--GTHLRMEQSGFRPDQ-RRAYGGAKMGWPQFFEKL 135 (151)
T ss_dssp EEEEEEEEET-TTEEEEECBBCCSSTT-TCBCCEEEEEEEECSS--SEEEEEEEECCCTTC-HHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEeC-CCEEEEEEecCCCCCC-CCCCeEEEEEEEEcCC--CEEEEEEEeCCCcch-HHHHHhhhhCHHHHHHHH
Confidence 4556777764 566777765432 11 1122356778888754 699988866322111 000112234555677888
Q ss_pred HHHHhc
Q 039477 84 DAHLLS 89 (92)
Q Consensus 84 e~~l~~ 89 (92)
++||-.
T Consensus 136 ~~~le~ 141 (151)
T 3q63_A 136 EQLLDR 141 (151)
T ss_dssp HHHHC-
T ss_pred HHHHhc
Confidence 887743
No 54
>1x53_A Activator of 90 kDa heat shock protein ATPase homolog 1; AHA1, HSP90,DUF704, C-terminal domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.129.3.5
Probab=72.05 E-value=13 Score=22.26 Aligned_cols=73 Identities=10% Similarity=-0.193 Sum_probs=41.4
Q ss_pred EEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHH-HHHHHHHHH
Q 039477 9 IIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILID-VAKDIDAHL 87 (92)
Q Consensus 9 rl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~-~~k~ie~~l 87 (92)
++.+++ .++.+.|+-...+.... .....++++.|.+ + +|.++++-...+... .+...+.... ++..|.++|
T Consensus 64 ~v~e~~-p~~~l~~~~~~~~~~~~-~~~~v~~~l~~~~-~-gT~l~~~~~~~~~~~----~~~~~~Gw~~~~l~~L~~~l 135 (145)
T 1x53_A 64 EFTDLV-PEKHIVMKWRFKSWPEG-HFATITLTFIDKN-G-ETELCMEGRGIPAPE----EERTRQGWQRYYFEGIKQTF 135 (145)
T ss_dssp CEEEEE-TTTEEEEEEEETTSCTT-CCEEEEEECCBCS-S-CEEEEEEEEEEEHHH----HHHHHHTTHHHHHHHHHHHT
T ss_pred EEEEEe-CCCEEEEEEecCCCCCC-CcEEEEEEEEECC-C-CEEEEEEEECCCHHH----HHHHHhchhHHHHHHHHHHH
Confidence 456665 46677777655433111 1245677777754 3 799998855433221 2333444455 678888877
Q ss_pred hc
Q 039477 88 LS 89 (92)
Q Consensus 88 ~~ 89 (92)
-.
T Consensus 136 e~ 137 (145)
T 1x53_A 136 GY 137 (145)
T ss_dssp CC
T ss_pred hc
Confidence 43
No 55
>2kew_A Uncharacterized protein YNDB; start domain, resonance assignments, lipid binding, structural genomics, unknown FU PSI-2; NMR {Bacillus subtilis subsp} PDB: 2kte_A
Probab=70.73 E-value=12 Score=22.72 Aligned_cols=42 Identities=7% Similarity=-0.012 Sum_probs=27.3
Q ss_pred EEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEE
Q 039477 7 KEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFE 58 (92)
Q Consensus 7 kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ 58 (92)
.-++..+++ .+.+.|+...+ ....+++|.|.++ ||+++++-.
T Consensus 62 ~~~v~e~~p-~~~l~~~~~~~-------~~~~~~~l~~~~~--gT~l~~~~~ 103 (152)
T 2kew_A 62 PCKVLAVQA-PTELSFEWDTE-------GWVVTFQLEDLGE--KTGFTLIHS 103 (152)
T ss_dssp CBEEEEEET-TTEEEEECTTS-------CCEEEEEEECCSS--CEEEEEEEC
T ss_pred EEEEEEEeC-CcEEEEEEccC-------CEEEEEEEEECCC--CEEEEEEEE
Confidence 345677765 56777765433 2456788888654 698887754
No 56
>2lgh_A Uncharacterized protein; AHSA1, start domain, COG3832, PF08327, HSP90, heat shock, ST genomics, PSI-biology; NMR {Aeromonas hydrophila subsp}
Probab=68.92 E-value=16 Score=21.97 Aligned_cols=69 Identities=9% Similarity=0.105 Sum_probs=42.5
Q ss_pred EEEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHHHHHHH
Q 039477 6 AKEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVAKDIDA 85 (92)
Q Consensus 6 ~kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~k~ie~ 85 (92)
+.-++.+++ ..+.+.|+.. | ....+++|.|.+ + +|.++.+..+. + ....+........++..|++
T Consensus 66 ~~g~v~e~~-p~~~l~~~~~-~-------~~~~~~~l~~~~-~-gT~l~~~~~~~--~--~~~~~~~~~Gw~~~L~~L~~ 130 (144)
T 2lgh_A 66 FTGTFTRVE-APTRLSFVMD-D-------GREVDVQFASEP-G-GTWVQETFDAE--T--SHTPAQQQAGWQGILDNFKR 130 (144)
T ss_dssp EEEEEEEEE-TTTEEEEEET-T-------CCEEEEEEEEET-T-EEEEEEEEECC--T--TSCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEe-CCCEEEEEec-C-------CcEEEEEEEEcC-C-CEEEEEEEECC--C--HHHHHHHHHHHHHHHHHHHH
Confidence 345666676 4566777742 2 145678888874 3 79888777652 1 12334444556677888888
Q ss_pred HHhc
Q 039477 86 HLLS 89 (92)
Q Consensus 86 ~l~~ 89 (92)
+|..
T Consensus 131 ~le~ 134 (144)
T 2lgh_A 131 YVEA 134 (144)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8754
No 57
>4fpw_A CALU16; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.50A {Micromonospora echinospora} PDB: 2luz_A
Probab=68.30 E-value=21 Score=22.94 Aligned_cols=69 Identities=6% Similarity=-0.130 Sum_probs=41.6
Q ss_pred EEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHHHHHHHHHh
Q 039477 9 IIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVAKDIDAHLL 88 (92)
Q Consensus 9 rl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~k~ie~~l~ 88 (92)
++..++ ..+.+.|+...++. + ....+++|.|.+ + +|.++++-..... ............++..|++||-
T Consensus 72 ~v~e~~-pp~rl~~tw~~~~~--~--~s~vt~~l~~~~-~-gT~Ltl~~~~~~~----e~~~~~~~GW~~~L~~L~~~L~ 140 (181)
T 4fpw_A 72 DILRCE-PPRRLTISWVYEGK--P--DSEVELRLSEEG-D-GTLLELEHATTSE----QMLVEVGVGWEMALDFLGMFIR 140 (181)
T ss_dssp ECCEEE-TTTEEEEEEBCTTS--C--CEEEEEEEEEET-T-EEEEEEEEEESCH----HHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEEEc-CCcEEEEEEEcCCC--C--cEEEEEEEEECC-C-cEEEEEEEEcCCH----HHHHHHHHhHHHHHHHHHHHhC
Confidence 455665 46777888765433 2 346788888864 3 7998887664321 1112223445567888888874
No 58
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=68.10 E-value=21 Score=22.82 Aligned_cols=55 Identities=13% Similarity=0.169 Sum_probs=37.1
Q ss_pred eeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHH-----HHHHHHHHHHHHHhcCC
Q 039477 33 YKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQ-----ILIDVAKDIDAHLLSQQ 91 (92)
Q Consensus 33 ~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~-----~~~~~~k~ie~~l~~~~ 91 (92)
...+.+...+.|.+++ +|.+.+....++.+ .. |..+.+ ....+++.|..++.+-|
T Consensus 152 ~~~~~~~~~i~p~~~~-~t~v~~~~~~Dp~G-~i--P~~l~n~~~~~~~~~~l~~l~k~~~~y~ 211 (214)
T 1ln1_A 152 VKQYKQSLAIESDGKK-GSKVFMYYFDNPGG-QI--PSWLINWAAKNGVPNFLKDMARACQNYL 211 (214)
T ss_dssp ECCEEEEEEEEECSSS-SEEEEEEEEECCSS-CC--CHHHHHHHHHTHHHHHHHHHHHHHHTC-
T ss_pred EEEEEEEEEEecCCCC-ceEEEEEEEECCCC-cc--cHHHHHHHHHHHhHHHHHHHHHHHHhcc
Confidence 4567777888887665 89999999999885 33 333322 33467778877776543
No 59
>2l9p_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Staphylococcus epidermidis}
Probab=65.20 E-value=13 Score=22.84 Aligned_cols=77 Identities=8% Similarity=-0.016 Sum_probs=43.4
Q ss_pred EEEEEEEeeCCCCEEEEEEEecc---cc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhh-----HHHHH
Q 039477 6 AKEIIEAIDNENYITNYKVIEGN---LL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTG-----KLQIL 76 (92)
Q Consensus 6 ~kErl~~~D~~~~~~~y~i~eg~---~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~-----~~~~~ 76 (92)
+.-++.++++ .+.+.|+..-++ .. ........+++|.|.+ + +|+++.+..|.. ....+. .....
T Consensus 70 ~~g~v~e~~p-~~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~-~-gT~l~~~~~~~~----~~~~~~~~~~~~~~Gw 142 (164)
T 2l9p_A 70 TIAEYLQVDA-PYYIEYLDYFATSKGEKDTSMPGMHITLNFEEVK-G-KTTVTSTSTFPT----ESAAQQAIDMGVETGM 142 (164)
T ss_dssp EEEEESCCBT-TTEEEEEEEEEBTTBSCCSSSCCEEEEEEECCCS-S-SEEEEEEEECSS----TTHHHHHHHHTHHHHH
T ss_pred EEEEEEEEcC-CCEEEEEEEecCCCCCccCCCCceEEEEEEEECC-C-CEEEEEEEEcCC----HHHHHHHHHhhHHHHH
Confidence 4556677764 566777664321 10 0122356788888864 3 799888876431 111222 23345
Q ss_pred HHHHHHHHHHHhc
Q 039477 77 IDVAKDIDAHLLS 89 (92)
Q Consensus 77 ~~~~k~ie~~l~~ 89 (92)
..++..|+++|.+
T Consensus 143 ~~~L~~L~~~le~ 155 (164)
T 2l9p_A 143 NSTLNQLEKLLNQ 155 (164)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHH
Confidence 5677888888754
No 60
>2nn5_A Hypothetical protein EF_2215; structural genomics, APC29336, PSI-2, structure initiative; HET: MSE; 1.45A {Enterococcus faecalis} SCOP: d.129.3.5
Probab=61.02 E-value=29 Score=22.09 Aligned_cols=69 Identities=3% Similarity=-0.167 Sum_probs=40.7
Q ss_pred EEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEe-eCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHHHHHHH
Q 039477 7 KEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTP-KENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVAKDIDA 85 (92)
Q Consensus 7 kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p-~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~k~ie~ 85 (92)
.-++..+++ .+.+.|+.- + ...+++|.| .+ + +|.++++-.|... -..........+..++..|.+
T Consensus 89 ~~~v~e~~p-~~rl~~~~~-~--------~~v~~~l~~~~~-~-gT~l~~~~~~~~g--~~~~~~~~~~GW~~~L~~Lk~ 154 (184)
T 2nn5_A 89 TMPFTDYAE-EKYLGVTWD-T--------GIIYFDLKEQAP-H-QTLLVFSESLPEN--FTTPRHKDIAGWSIVLNRLKQ 154 (184)
T ss_dssp EEEEEEEET-TTEEEEEET-T--------EEEEEEEEEEET-T-EEEEEEEEEECTT--CSSCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecC-CCEEEEEEc-C--------eEEEEEEEECCC-C-CEEEEEEEeccCC--ccchhhHHHHHHHHHHHHHHH
Confidence 345666654 345566542 1 466788888 54 4 7999999444321 111122344556678888888
Q ss_pred HHhc
Q 039477 86 HLLS 89 (92)
Q Consensus 86 ~l~~ 89 (92)
+|-.
T Consensus 155 ~le~ 158 (184)
T 2nn5_A 155 VVET 158 (184)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 8865
No 61
>2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8
Probab=59.06 E-value=15 Score=23.09 Aligned_cols=18 Identities=28% Similarity=0.628 Sum_probs=14.1
Q ss_pred EEEEEEeeCCCCceEEEEEE
Q 039477 38 STVKVTPKENDDGSLVHWIF 57 (92)
Q Consensus 38 ~ti~v~p~~~g~~~~v~W~~ 57 (92)
..+++.|.++ ||.|+|+.
T Consensus 107 ~~~rv~p~g~--GTeV~~tl 124 (156)
T 2qpv_A 107 NALRVTPNGS--GTEVSFTL 124 (156)
T ss_dssp EEEEEEEETT--EEEEEEEE
T ss_pred EEEEEEeCCC--CEEEEEEE
Confidence 4678888754 69999998
No 62
>2i46_A Adrenocortical dysplasia protein homolog; TPP1, OB fold, POT1 binding, protein binding; 2.70A {Homo sapiens}
Probab=56.92 E-value=0.45 Score=30.58 Aligned_cols=79 Identities=16% Similarity=0.190 Sum_probs=42.9
Q ss_pred EeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhH---H--HHHHHHHHHHHHH
Q 039477 12 AIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGK---L--QILIDVAKDIDAH 86 (92)
Q Consensus 12 ~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~---~--~~~~~~~k~ie~~ 86 (92)
..|-+.+-+.++-++|-++ .+++|...+|+.+.... .-+.-|--+|.-.....+...-. . +.-.++.+.+|+|
T Consensus 75 ~sdwEEk~Fgfr~~egrll-lLqd~~V~vqv~e~~~~-~EF~lqVdrF~lLPtEqpr~~v~~CN~dp~VrkKl~~cle~h 152 (161)
T 2i46_A 75 TSDWEEKEFGFRGTEGRLL-LLQDCGVHVQVAEGGAP-AEFYLQVDRFSLLPTEQPRLRVPGCNQDLDVQKKLYDCLEEH 152 (161)
T ss_dssp TSCCTTSCSSCTTCTTEEE-EEEEEEEEEECCBTTBC-CEEEEEEEEEEEEEEECCCCCCCBGGGSHHHHHHHHHHHTTC
T ss_pred hhhhhhhhcCcccccceEE-EEecCCEEEEEecCCCc-eeEEEEEeeEeeccccCccccccCCCCCHHHHHHHHHHHHHH
Confidence 3444555555665667554 68899999998765433 45556666676554333221111 1 1224788899999
Q ss_pred HhcCCC
Q 039477 87 LLSQQP 92 (92)
Q Consensus 87 l~~~~~ 92 (92)
|..++|
T Consensus 153 lsEs~s 158 (161)
T 2i46_A 153 LSESTS 158 (161)
T ss_dssp ------
T ss_pred hhccCC
Confidence 876653
No 63
>3nrf_A APAG protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; 1.50A {Pseudomonas aeruginosa} PDB: 3sb3_A
Probab=54.94 E-value=33 Score=20.76 Aligned_cols=49 Identities=12% Similarity=0.129 Sum_probs=36.2
Q ss_pred EEEeeCCCCEEEEEEEecccc-cce---eEEEEEEEEEeeCCC--CceEEEEEEE
Q 039477 10 IEAIDNENYITNYKVIEGNLL-ELY---KSFSSTVKVTPKEND--DGSLVHWIFE 58 (92)
Q Consensus 10 l~~~D~~~~~~~y~i~eg~~~-~~~---~~~~~ti~v~p~~~g--~~~~v~W~~~ 58 (92)
+.+++++++.+...-++..+. ..+ ++-.+..-|...++. +.+.|+|+.+
T Consensus 50 ~~a~~~~gkef~ldTVde~L~~g~lk~g~~vkG~avFaS~d~sVy~a~lVK~s~~ 104 (106)
T 3nrf_A 50 LVAQSAAGQSFRLDTVDEELTADTLKPGASVEGDAIFASEDDAVYGASLVRLSDR 104 (106)
T ss_dssp EEEEETTSCEEEEEEECGGGGCSEECTTCEEEEEEEEEESSSGGGGEEEEEEESC
T ss_pred heeeCcCCCEEEecccchhhhhccccCCCceeeEEEEeeCChhheeeeEEEeecc
Confidence 578999999999999998775 333 346777777655443 5689999864
No 64
>2ldk_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Arthrobacter aurescens}
Probab=53.53 E-value=36 Score=20.84 Aligned_cols=79 Identities=15% Similarity=0.048 Sum_probs=47.3
Q ss_pred eEEEEEEEeeCCCCEEEEEEEecccc-cc---eeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhh-----HHHH
Q 039477 5 IAKEIIEAIDNENYITNYKVIEGNLL-EL---YKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTG-----KLQI 75 (92)
Q Consensus 5 ~~kErl~~~D~~~~~~~y~i~eg~~~-~~---~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~-----~~~~ 75 (92)
...-++.+++ ..+.+.|+...++.. .+ ......+++|.|.+ + +|+++++..+.... ..+. ....
T Consensus 74 ~~~~~v~e~~-p~~rl~~~~~~~~~~g~p~~~~~~~~v~~~l~~~~-~-gT~lt~~~~~~~~~----~~~~~~~~~~~~G 146 (172)
T 2ldk_A 74 RGWWQFTTIE-APDHLEFDDGFADEHGAPVDELGVTHATVKLEPLE-N-RTRMTIISTFESEE----QMQKMAEMGMEEG 146 (172)
T ss_dssp EEEEEEEEEC-SSSEEEEEEEEBCSSCCBCTTTCEEEEEEEEEEET-T-EEEEEEEEEESCHH----HHHHHHHHTHHHH
T ss_pred eeEEEEEEEc-CCCEEEEEEeecCCCCCccCCCccEEEEEEEEEcC-C-CEEEEEEEEcCCHH----HHHHHHHhhHHHH
Confidence 3566788886 466777776543211 11 12467788888875 3 79999998853110 1111 1334
Q ss_pred HHHHHHHHHHHHhcC
Q 039477 76 LIDVAKDIDAHLLSQ 90 (92)
Q Consensus 76 ~~~~~k~ie~~l~~~ 90 (92)
+..++..|.++|-+.
T Consensus 147 w~~~L~~L~~~le~~ 161 (172)
T 2ldk_A 147 MREAIEQIDAVLSEP 161 (172)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHh
Confidence 556788888887653
No 65
>3ni8_A PFC0360W protein; heat shock, malaria, ATPase, structural genomics consortium, unknown function; 2.50A {Plasmodium falciparum}
Probab=48.43 E-value=46 Score=20.56 Aligned_cols=79 Identities=9% Similarity=-0.082 Sum_probs=42.3
Q ss_pred EEEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCC---hhhHHHHHHH-HHHH
Q 039477 7 KEIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPD---PTGKLQILID-VAKD 82 (92)
Q Consensus 7 kErl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~---~~~~~~~~~~-~~k~ 82 (92)
.=++.++++ .+.+.|+---.+.... ..-..+++|.|.+++ +|+++.+-.--+....... .+...+.... ++..
T Consensus 71 ~g~v~ev~p-~~rlv~tw~~~~~~~~-~~s~vt~~l~~~~~~-~T~ltl~~~g~~~~~~~~~~~~~~~~~~GW~~~~L~~ 147 (158)
T 3ni8_A 71 LGEFTEITK-PHKIVEKWKFRDWNEC-DYSTVTVEFISVKEN-HTKLKLTHNNIPASNKYNEGGVLERCKNGWTQNFLHN 147 (158)
T ss_dssp EEEEEEEET-TTEEEEEEEETTSCSS-CCEEEEEEEEEEETT-EEEEEEEEECCCSSCTTCCCCHHHHHHHHHHHTHHHH
T ss_pred EEEEEEEeC-CcEEEEEEEecCCCCC-CcEEEEEEEEecCCC-CEEEEEEEEccCchhhhccchhHHHHHhChhHHHHHH
Confidence 335666765 4556655432222111 113567888885445 7988887663332221111 3334455666 5888
Q ss_pred HHHHHh
Q 039477 83 IDAHLL 88 (92)
Q Consensus 83 ie~~l~ 88 (92)
|.+||-
T Consensus 148 Lk~~Le 153 (158)
T 3ni8_A 148 IEVILG 153 (158)
T ss_dssp HHHTSC
T ss_pred HHHHhC
Confidence 888863
No 66
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=43.79 E-value=34 Score=22.23 Aligned_cols=50 Identities=14% Similarity=0.179 Sum_probs=30.7
Q ss_pred EEEEEEEeeCCC-CceEEEEEEEEEEcCCCCCChhhHHH-----HHHHHHHHHHHHHhc
Q 039477 37 SSTVKVTPKEND-DGSLVHWIFEYEKLNEDVPDPTGKLQ-----ILIDVAKDIDAHLLS 89 (92)
Q Consensus 37 ~~ti~v~p~~~g-~~~~v~W~~~ye~~~~~~~~~~~~~~-----~~~~~~k~ie~~l~~ 89 (92)
.+.+.+.|.+++ +.|.+.|.+.-++.+. .| .-+.+ ....+++.|.+++.+
T Consensus 168 ~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-iP--~~lvn~~~~~~~~~~~~~Lr~~~~~ 223 (224)
T 1jss_A 168 PCGWFCVPLKDSPSQSLLTGYIQTDLRGM-IP--QSAVDTAMASTLANFYSDLRKGLRK 223 (224)
T ss_dssp SEEEEEEEETTEEEEEEEEEEECEECCSC-CC--HHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred ccEEEEEEcCCCCCceEEEEEEEeCCCCC-cc--HHHHHHHHHHhHHHHHHHHHHHHhh
Confidence 344667776543 4799999998888763 32 33333 234666777776643
No 67
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=38.45 E-value=79 Score=20.39 Aligned_cols=49 Identities=6% Similarity=0.072 Sum_probs=30.3
Q ss_pred EEEEEEeeC-CCCceEEEEEEEEEEcCCCCCChhhHHH-----HHHHHHHHHHHHHhc
Q 039477 38 STVKVTPKE-NDDGSLVHWIFEYEKLNEDVPDPTGKLQ-----ILIDVAKDIDAHLLS 89 (92)
Q Consensus 38 ~ti~v~p~~-~g~~~~v~W~~~ye~~~~~~~~~~~~~~-----~~~~~~k~ie~~l~~ 89 (92)
+.+-+.|.+ ++++|.+.|....++.+. .| ..+.. .+...++.|.+++.+
T Consensus 174 ~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-iP--~~lvn~~~~~~~~~~~~~Lr~~~~~ 228 (231)
T 2r55_A 174 CGCFCEPLPGEPTKTNLVTFFHTDLSGY-LP--QNVVDSFFPRSMTRFYANLQKAVKQ 228 (231)
T ss_dssp EEEEEEECC--CCCEEEEEEECEECCSS-CC--HHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred eEEEEEEeCCCCCcEEEEEEEEeCCCCC-cc--HHHHHHHHhHhHHHHHHHHHHHHHH
Confidence 445666754 233899999999888763 33 23322 334667777777754
No 68
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=36.34 E-value=40 Score=21.79 Aligned_cols=49 Identities=14% Similarity=0.335 Sum_probs=32.0
Q ss_pred EEEEEEEeeCCC-CceEEEEEEEEEEcCCCCCChhhHH-----HHHHHHHHHHHHHHh
Q 039477 37 SSTVKVTPKEND-DGSLVHWIFEYEKLNEDVPDPTGKL-----QILIDVAKDIDAHLL 88 (92)
Q Consensus 37 ~~ti~v~p~~~g-~~~~v~W~~~ye~~~~~~~~~~~~~-----~~~~~~~k~ie~~l~ 88 (92)
.+.+.+.|.+++ ++|.+.|....++.+. . |.-+. .....+++.|.+++.
T Consensus 159 ~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-i--P~~lvn~~~~~~~~~~~~~Lr~~~~ 213 (221)
T 3p0l_A 159 PTCMVLHPLAGSPSKTKLTWLLSIDLKGW-L--PKSIINQVLSQTQVDFANHLRKRLE 213 (221)
T ss_dssp SCEEEEEEETTEEEEEEEEEEECEECCSS-C--CHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEEECCCCCCcEEEEEEEEecCCCC-C--CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345667777643 3699999999888764 3 33332 234467788888876
No 69
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=34.10 E-value=94 Score=20.01 Aligned_cols=51 Identities=10% Similarity=0.124 Sum_probs=31.8
Q ss_pred EEEEEEEEeeCC-CCceEEEEEEEEEEcCCCCCChhhH-----HHHHHHHHHHHHHHHhc
Q 039477 36 FSSTVKVTPKEN-DDGSLVHWIFEYEKLNEDVPDPTGK-----LQILIDVAKDIDAHLLS 89 (92)
Q Consensus 36 ~~~ti~v~p~~~-g~~~~v~W~~~ye~~~~~~~~~~~~-----~~~~~~~~k~ie~~l~~ 89 (92)
+.+.+.+.|.++ ++.|.+.|....++.+. .| .-+ ...+..+++.|.+++.+
T Consensus 169 ~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-iP--~~l~n~~~~~~~~~~~~~Lr~~~~~ 225 (229)
T 1em2_A 169 GPGGMIVLKSASNPRVCTFVWILNTDLKGR-LP--RYLIHQSLAATMFEFAFHLRQRISE 225 (229)
T ss_dssp CSEEEEEEECSSCTTCEEEEEEECEECCSS-SC--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccEEEEEecCCCCCcEEEEEEEEECCCCC-CC--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334566777543 24799999999888763 33 222 22334667777777654
No 70
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=31.33 E-value=1.1e+02 Score=20.09 Aligned_cols=55 Identities=11% Similarity=0.063 Sum_probs=35.7
Q ss_pred eeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCC-hhhH-HHHHHHHHHHHHHHHhc
Q 039477 33 YKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPD-PTGK-LQILIDVAKDIDAHLLS 89 (92)
Q Consensus 33 ~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~-~~~~-~~~~~~~~k~ie~~l~~ 89 (92)
...+.+.+-+.|.+++ +|.+.|....++.+ ..|. .... .......++.|.+++.+
T Consensus 171 ~~~~~~g~~i~P~~~~-~t~vt~~~~~Dp~G-~iP~~ln~~~~~~~~~~l~~LR~~~~~ 227 (237)
T 2pso_A 171 AVVMDSQYLIEPCGSG-KSRLTHICRIDLKG-HSPEWYSKGFGHLCAAEVARIRNSFQP 227 (237)
T ss_dssp CCEEEEEEEEEECSTT-CEEEEEEEEECCSS-SCTTTTTTHHHHHHHHHHHHHHHTTSC
T ss_pred EEEeccEEEEEECCCC-CEEEEEEEEeCCCC-CchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445667778888666 89999999999885 3443 2121 23344667777776654
No 71
>1zxf_A CALC; SELF-sacrificing resistance protein, structural genomics, PSI, protein structure initiative; NMR {Micromonospora echinospora} SCOP: d.129.3.5 PDB: 2gkc_A* 2gkd_A 2l65_A*
Probab=28.30 E-value=1e+02 Score=18.61 Aligned_cols=75 Identities=11% Similarity=-0.043 Sum_probs=39.2
Q ss_pred EEEEeeCCCCEEEEEE-Eecccc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCCh---hhHH----HHHHHH
Q 039477 9 IIEAIDNENYITNYKV-IEGNLL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDP---TGKL----QILIDV 79 (92)
Q Consensus 9 rl~~~D~~~~~~~y~i-~eg~~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~---~~~~----~~~~~~ 79 (92)
++.+++ ..++++|+- .+++.. .+-..-..+++|.|.++| +|+++.+-..-. ...+ .... +....+
T Consensus 67 ~v~ev~-pp~rl~~tw~~~~~~~~~~~~~s~vt~~l~~~~~g-~T~ltl~~~~~~----~~~~~~~~~~~~~~~~GW~~~ 140 (155)
T 1zxf_A 67 LIRKVD-EPDTLVIGWRLNGFGRIDPDNSSEFTVTFVADGQK-KTRVDVEHTHFD----RMGTKHAKRVRNGMDKGWPTI 140 (155)
T ss_dssp EEEEEE-TTTEEEEECCCSSSSSCCCSSCCCEEEEEEEETTT-EEEEEEEECSST----TSCHHHHHHHHHHHTTTHHHH
T ss_pred EEEEEC-CCCEEEEEEecCCCCCCCCCCcEEEEEEEEECCCC-cEEEEEEEeccc----ccccchhHHHHHHHHhhHHHH
Confidence 566676 456677773 232110 111224568888887664 588776654211 1112 1111 234567
Q ss_pred HHHHHHHHhc
Q 039477 80 AKDIDAHLLS 89 (92)
Q Consensus 80 ~k~ie~~l~~ 89 (92)
+..|+++|.+
T Consensus 141 l~~L~~~l~~ 150 (155)
T 1zxf_A 141 LQSFQDKIDE 150 (155)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 7888887753
No 72
>2luz_A CALU16; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Micromonospora echinospora}
Probab=28.28 E-value=1.2e+02 Score=19.49 Aligned_cols=72 Identities=4% Similarity=-0.131 Sum_probs=42.0
Q ss_pred EEEEEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhhHHHHHHHHHHHHHHHH
Q 039477 8 EIIEAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTGKLQILIDVAKDIDAHL 87 (92)
Q Consensus 8 Erl~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~~~~~~~~~~k~ie~~l 87 (92)
-++..+++ .+.+.|+.-..+. + .-..++++.|.++ ||+++.+=...+ .............++..|++||
T Consensus 82 g~v~ev~p-p~rL~~tw~~~~~--~--~~~vt~~L~~~g~--gT~Ltl~h~~~~----~~~~~~~~~GW~~~Ld~L~~~L 150 (192)
T 2luz_A 82 GDILRCEP-PRRLTISWVYEGK--P--DSEVELRLSEEGD--GTLLELEHATTS----EQMLVEVGVGWEMALDFLGMFI 150 (192)
T ss_dssp EEEEEEET-TTEEEEEEEESSS--C--EEEEEEEEEEETT--EEEEEEEEEESC----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEec-CeeEEEEEeecCC--C--CceEEEEEEEcCC--cEEEEEEEECCC----HHHHHHHhccHHHHHHHHHHHh
Confidence 35666764 5677787654433 2 2346788888754 688776544211 0112222334557888999998
Q ss_pred hcC
Q 039477 88 LSQ 90 (92)
Q Consensus 88 ~~~ 90 (92)
--.
T Consensus 151 ~g~ 153 (192)
T 2luz_A 151 RGD 153 (192)
T ss_dssp TTC
T ss_pred CCC
Confidence 643
No 73
>1doa_B RHO GDI 1, protein (GDP-dissociation inhibitor 1); GTP-binding protein, CDC42, cell cycle; HET: GDP GER; 2.60A {Bos taurus} SCOP: b.1.18.8 PDB: 1hh4_D* 1cc0_E*
Probab=27.25 E-value=1.2e+02 Score=20.50 Aligned_cols=57 Identities=9% Similarity=0.119 Sum_probs=37.2
Q ss_pred EEEEEEEeeCCCCEEEEEEEe----cccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCC
Q 039477 6 AKEIIEAIDNENYITNYKVIE----GNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNED 65 (92)
Q Consensus 6 ~kErl~~~D~~~~~~~y~i~e----g~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~ 65 (92)
.++-|=.+.+..-.|.|.+-+ ++++ -=.+|++..+|+..+ + .|...|...|+-.-++
T Consensus 157 ~~~MlGSY~P~~e~y~~~~p~EeAPSGmL-ARG~Y~akSkF~DDD-~-~~hL~~eWsfeI~KdW 217 (219)
T 1doa_B 157 TDYMVGSYGPRAEEYEFLTPMEEAPKGML-ARGSYNIKSRFTDDD-R-TDHLSWEWNLTIKKEW 217 (219)
T ss_dssp EEEEEEEECCCSSCEEEECCCEECCCTTS-CCSEEEEEEEEECTT-C-CCCEEEEEEEEEESST
T ss_pred cceeeeccCCCCCcccccCCCccCCccce-eeeeeeeeEEEEeCC-C-ceEEEEEEEEEEecCC
Confidence 345555666666667776644 2333 236799999997543 3 6888888888865544
No 74
>4err_A Autotransporter adhesin; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.55A {Vibrio vulnificus}
Probab=24.36 E-value=74 Score=18.61 Aligned_cols=18 Identities=11% Similarity=0.235 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHhcCCC
Q 039477 75 ILIDVAKDIDAHLLSQQP 92 (92)
Q Consensus 75 ~~~~~~k~ie~~l~~~~~ 92 (92)
.+..+-+.|++||+.+|.
T Consensus 46 ~l~~L~~kie~Yl~~hPd 63 (90)
T 4err_A 46 ASFELNKKINDYIAEHPT 63 (90)
T ss_dssp HHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHhcCCc
Confidence 445667899999999884
No 75
>2lf2_A Uncharacterized protein; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; NMR {Cytophaga hutchinsonii}
Probab=23.46 E-value=1.3e+02 Score=18.33 Aligned_cols=74 Identities=14% Similarity=0.009 Sum_probs=42.7
Q ss_pred EEEEEEEeeCCCCEEEEEEEecc---cc-cceeEEEEEEEEEeeCCCCceEEEEEEEEEEcCCCCCChhh---H-----H
Q 039477 6 AKEIIEAIDNENYITNYKVIEGN---LL-ELYKSFSSTVKVTPKENDDGSLVHWIFEYEKLNEDVPDPTG---K-----L 73 (92)
Q Consensus 6 ~kErl~~~D~~~~~~~y~i~eg~---~~-~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~~~~~~~~~~---~-----~ 73 (92)
..-++.++++ .+.+.|+..-++ .. ..+.....+++|.|.+ + +|.++.+..|. +++. . .
T Consensus 79 ~~g~v~e~~p-~~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~-~-gT~l~~~~~~~-------~~~~~~~~~~~~~~ 148 (175)
T 2lf2_A 79 SICEYAIIKP-IERFTGKDGFTDASGKLNTEMPRSNWDMRFIDKG-E-ITEVQYHISYD-------DVAQLEATIQMGFK 148 (175)
T ss_dssp EEEEECCCCS-SSEEEEEEEEESSTTCCCTTSCCEEEEEEEEEET-T-EEEEEEEEECS-------CHHHHHHHHHHHHH
T ss_pred eEEEEEEEcC-CCEEEEEEEecCCCCCcCCCCCcEEEEEEEEECC-C-CEEEEEEEecC-------CHHHHHHHHHHhHH
Confidence 5567777764 566667654321 11 1122466788888875 3 79888887641 2221 1 2
Q ss_pred HHHHHHHHHHHHHHhc
Q 039477 74 QILIDVAKDIDAHLLS 89 (92)
Q Consensus 74 ~~~~~~~k~ie~~l~~ 89 (92)
.....++..|++||-.
T Consensus 149 ~Gw~~~L~~L~~~le~ 164 (175)
T 2lf2_A 149 EGITMAMENLDELLVS 164 (175)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 3445677788877753
No 76
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=23.16 E-value=1.6e+02 Score=19.20 Aligned_cols=37 Identities=8% Similarity=-0.015 Sum_probs=22.9
Q ss_pred CceEEEEEEEEEEcCCCCCChhhHHH-----HHHHHHHHHHHHHh
Q 039477 49 DGSLVHWIFEYEKLNEDVPDPTGKLQ-----ILIDVAKDIDAHLL 88 (92)
Q Consensus 49 ~~~~v~W~~~ye~~~~~~~~~~~~~~-----~~~~~~k~ie~~l~ 88 (92)
++|.+.|....++.+ .. |.-+.+ ....+++.|..|+.
T Consensus 204 ~~t~vt~~~~~Dp~G-~i--P~~lvn~~~~~~~~~~l~~L~k~v~ 245 (255)
T 2e3n_A 204 ILCKITYVANVNPGG-WA--PASVLRAVAKREYPKFLKRFTSYVQ 245 (255)
T ss_dssp EEEEEEEEEEEECSS-CC--CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEEeCCCC-cc--CHHHHHHHHhccccHHHHHHHHHHH
Confidence 379999999988875 33 222322 23356677766654
No 77
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=23.13 E-value=95 Score=22.67 Aligned_cols=48 Identities=4% Similarity=-0.011 Sum_probs=35.3
Q ss_pred EEeeCCCCEEEEEEEecccccceeEEEEEEEEEeeCCCCceEEEEEEEEEEc
Q 039477 11 EAIDNENYITNYKVIEGNLLELYKSFSSTVKVTPKENDDGSLVHWIFEYEKL 62 (92)
Q Consensus 11 ~~~D~~~~~~~y~i~eg~~~~~~~~~~~ti~v~p~~~g~~~~v~W~~~ye~~ 62 (92)
..++ ..+.+......|++. -|.++..+-.|.+.++ ||.++.+++|.-.
T Consensus 67 t~~~-~~~~F~d~~~~gp~~-~~~~w~h~h~f~~~~~--gt~~~d~~~~~~p 114 (516)
T 3oh8_A 67 SGFL-NGSRFTDVCLTAPVK-ALANWRHVHNFVDQDG--GTLITDSVSTRLP 114 (516)
T ss_dssp GGCB-TTTEEEEECCSCSSG-GGSSCEEEEEEEEETT--EEEEEEEEECSSC
T ss_pred cccc-CCCeEEEEeccCccc-ceeeeEEEEEEEEcCC--CcEEEEEEEeeCc
Confidence 4454 566888888888752 1777788888888754 6999999998744
No 78
>1ug8_A Poly(A)-specific ribonuclease; R3H domain, poly(A)-specific 3'-exoribonuclease, PARN, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.68.7.1
Probab=20.79 E-value=72 Score=18.48 Aligned_cols=25 Identities=16% Similarity=0.251 Sum_probs=19.9
Q ss_pred CChhhHHHHHHHHHHHHHHHHhcCC
Q 039477 67 PDPTGKLQILIDVAKDIDAHLLSQQ 91 (92)
Q Consensus 67 ~~~~~~~~~~~~~~k~ie~~l~~~~ 91 (92)
+-|+.-+++...+...|+++|.+..
T Consensus 4 ~ip~e~k~~id~i~~kIe~FL~s~~ 28 (87)
T 1ug8_A 4 GSSGDQKKFIDQVIEKIEDFLQSEE 28 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred ccChHHHHHHHHHHHHHHHHHhCCC
Confidence 3466667888899999999998763
Done!