Query 039479
Match_columns 182
No_of_seqs 205 out of 458
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 17:15:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039479.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039479hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 19.0 39 0.0029 21.1 2.7 25 9-33 23-47 (67)
2 d2byea1 d.15.1.5 (A:2-110) Pho 16.2 90 0.0066 20.9 4.4 55 66-123 5-59 (109)
3 d1wj5a_ a.4.5.59 (A:) OB fold- 11.0 1.6E+02 0.012 20.1 4.4 38 139-176 72-110 (120)
4 d1u5ta2 a.4.5.54 (A:165-232) V 10.3 1.2E+02 0.0088 18.7 3.3 36 22-61 32-67 (68)
5 d1c6vx_ b.34.7.1 (X:) DNA-bind 10.0 39 0.0028 20.4 0.6 42 68-123 6-47 (55)
6 d1xkta_ c.69.1.22 (A:) Fatty a 9.0 67 0.0049 21.6 1.7 30 143-179 66-95 (286)
7 d1brta_ c.69.1.12 (A:) Bromope 7.4 1.7E+02 0.012 19.5 3.4 14 166-179 88-101 (277)
8 d1v2aa1 a.45.1.1 (A:84-208) Cl 7.3 23 0.0017 23.2 -1.5 58 100-164 53-111 (125)
9 d1ufba_ a.24.16.3 (A:) Hypothe 7.1 25 0.0018 23.7 -1.4 84 16-115 3-94 (127)
10 d1hkha_ c.69.1.12 (A:) Gamma-l 6.7 1.5E+02 0.011 19.8 2.9 14 166-179 88-101 (279)
No 1
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.97 E-value=39 Score=21.12 Aligned_cols=25 Identities=28% Similarity=0.363 Sum_probs=21.0
Q ss_pred hccchhhhhHHHHHHHHHHHHHhhh
Q 039479 9 SQMNQFNWVEASLVRARSSIREAAL 33 (182)
Q Consensus 9 ~~~~~~~~~~~~l~~ar~~i~~a~~ 33 (182)
....++..+|++|.+.|.+|++--.
T Consensus 23 m~l~sV~diE~eLerCk~~irrLeq 47 (67)
T d1k1fa_ 23 MELRSVGDIEQELERAKASIRRLEQ 47 (67)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred chhccHhHHHHHHHHHHHHHHHHHH
Confidence 4556789999999999999998754
No 2
>d2byea1 d.15.1.5 (A:2-110) Phospholipase C-epsilon-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.21 E-value=90 Score=20.88 Aligned_cols=55 Identities=7% Similarity=0.033 Sum_probs=27.9
Q ss_pred hhcCceEEEecCCCCCCCCCCCCCCchhhHHHHHHHHhhCCCcccCCcCCcceEEEce
Q 039479 66 MEKLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPF 123 (182)
Q Consensus 66 m~~~lKIYVY~lg~pp~~h~~~~~~~Ya~E~~F~~~Ll~~s~~rT~DP~eAdlFfvPf 123 (182)
|...|||+||....+-.|-. ..-.+.+.=.-.++++|.. ..-.+++-.|++.+=.
T Consensus 5 ~~~t~~V~V~~v~~~~Py~~-l~is~~sTA~~Vv~q~L~K--~~~~~~dp~~y~L~Ee 59 (109)
T d2byea1 5 CLQTHRVTVHGVPGPEPFTV-FTINGGTKAKQLLQQILTN--EQDIKPVTTDYFLMEE 59 (109)
T ss_dssp CCCCCEEEESSCSSSSSSEE-EECCTTCCHHHHHHHHHCC--SSSSCCCCCSEEEEEE
T ss_pred cceEEEEEEEECCCCCCcEE-EEECCCccHHHHHHHHHHH--cCCCCCChhHEEEEEE
Confidence 46789999999822111100 0112333333456667743 3334455556666543
No 3
>d1wj5a_ a.4.5.59 (A:) OB fold-containing protein 1, Obfc1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=11.01 E-value=1.6e+02 Score=20.15 Aligned_cols=38 Identities=13% Similarity=0.289 Sum_probs=32.5
Q ss_pred chhHHHHHHHHHHHHHHhcCchhhcCCCCC-eEEEcCCC
Q 039479 139 EINAIGHSIVDYISIISHKYPFWNRSLGAD-HFMLSCHD 176 (182)
Q Consensus 139 ~~~~l~~~l~dyv~~I~~kyPyWnRs~GaD-Hf~v~cHD 176 (182)
...++..+++++|+.+..+.--+++.+|.| =+.|.-+|
T Consensus 72 tskqI~siFKeAi~~Lqe~G~VFqK~~~~D~lYyVT~qD 110 (120)
T d1wj5a_ 72 TSGVAQRVFKNALQLLQEKGLVFQRDSGSDKLYYVTTKD 110 (120)
T ss_dssp SCHHHHHHHHHHHHHHHHHTSEECSSCSSSCCBEECSSS
T ss_pred HHHHHHHHHHHHHHHHHHCCEEEecCCCccceEEeeccc
Confidence 446788999999999999998999999998 56677777
No 4
>d1u5ta2 a.4.5.54 (A:165-232) Vacuolar sorting protein SNF8 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=10.28 E-value=1.2e+02 Score=18.65 Aligned_cols=36 Identities=22% Similarity=0.198 Sum_probs=23.3
Q ss_pred HHHHHHHHHhhhhccCccCCCCCCCCCCCCcccChhhhhh
Q 039479 22 VRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHR 61 (182)
Q Consensus 22 ~~ar~~i~~a~~~~~~~~~~~~~~~~~~~~~y~n~~~f~~ 61 (182)
.+|+..|+.-....-.....+. .-...|+-|+.|.+
T Consensus 32 ~Ra~~aLd~lv~eGl~WvD~Q~----~~e~~YWfPsl~~~ 67 (68)
T d1u5ta2 32 VRSKSALDEMVANGLLWIDYQG----GAEALYWDPSWITR 67 (68)
T ss_dssp HHHHHHHHHHHHTTSSEEECSS----SSSCEEECGGGGGC
T ss_pred HHHHHHHHHHHhcCcEEEecCC----CCCceeeChHhhcc
Confidence 6888888887664333323221 23468999999975
No 5
>d1c6vx_ b.34.7.1 (X:) DNA-binding domain of retroviral integrase {Simian immunodeficiency virus [TaxId: 11723]}
Probab=10.05 E-value=39 Score=20.42 Aligned_cols=42 Identities=26% Similarity=0.515 Sum_probs=24.3
Q ss_pred cCceEEEecCCCCCCCCCCCCCCchhhHHHHHHHHhhCCCcccCCcCCcceEEEce
Q 039479 68 KLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPF 123 (182)
Q Consensus 68 ~~lKIYVY~lg~pp~~h~~~~~~~Ya~E~~F~~~Ll~~s~~rT~DP~eAdlFfvPf 123 (182)
.+|||| |.+|.-|+. .||-+-.+--| ..+..++.+ +++.||-
T Consensus 6 ~nFrVY-YR~~~dp~W-kGPa~LlWKGE----------GAVVik~~~--~i~~VPR 47 (55)
T d1c6vx_ 6 KNFRVY-YREGRDQLW-KGPGELLWKGE----------GAVLLKVGT--DIKVVPR 47 (55)
T ss_dssp CCEEEC-CCCSSCSCC-CCCEEECCCSS----------SSCEEEETT--EEEECCG
T ss_pred cceEEE-EEcCCCCCc-cCCeeeEEccc----------ceEEEecCC--eEEEEec
Confidence 578898 888776655 44432222223 345566643 7777774
No 6
>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.99 E-value=67 Score=21.57 Aligned_cols=30 Identities=13% Similarity=0.120 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHhcCchhhcCCCCCeEEEcCCCCCC
Q 039479 143 IGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDWVR 179 (182)
Q Consensus 143 l~~~l~dyv~~I~~kyPyWnRs~GaDHf~v~cHD~g~ 179 (182)
+..+..+|+..+.. ..|-..|.+..|+||.
T Consensus 66 ~~~~a~~~~~~~~~-------~~~~~~~~lvGhS~Gg 95 (286)
T d1xkta_ 66 IHSLAAYYIDCIRQ-------VQPEGPYRVAGYSYGA 95 (286)
T ss_dssp HHHHHHHHHHHHHH-------HCCSSCCEEEEETHHH
T ss_pred HHHHHHHHHHHHHH-------hcCCCceEEeecCCcc
Confidence 34455666665543 4466788899999985
No 7
>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]}
Probab=7.38 E-value=1.7e+02 Score=19.52 Aligned_cols=14 Identities=7% Similarity=-0.142 Sum_probs=11.8
Q ss_pred CCCeEEEcCCCCCC
Q 039479 166 GADHFMLSCHDWVR 179 (182)
Q Consensus 166 GaDHf~v~cHD~g~ 179 (182)
|.+.+.+..|+||.
T Consensus 88 ~~~~~~lvGhS~G~ 101 (277)
T d1brta_ 88 DLQDAVLVGFSTGT 101 (277)
T ss_dssp TCCSEEEEEEGGGH
T ss_pred Ccccccccccccch
Confidence 66789999999984
No 8
>d1v2aa1 a.45.1.1 (A:84-208) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-6 [TaxId: 123217]}
Probab=7.34 E-value=23 Score=23.16 Aligned_cols=58 Identities=12% Similarity=0.199 Sum_probs=35.4
Q ss_pred HHHhhCCCcccCC-cCCcceEEEceeeeeeeeccccCCCCchhHHHHHHHHHHHHHHhcCchhhcC
Q 039479 100 HEMERSNTYKTKD-PEKALVYFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRS 164 (182)
Q Consensus 100 ~~Ll~~s~~rT~D-P~eAdlFfvPf~~~~~~~~ly~p~~~~~~~l~~~l~dyv~~I~~kyPyWnRs 164 (182)
+..|.+.++.+-| +.-||+...|....... + +. +..... -|..|++.+.++.|+|+.-
T Consensus 53 e~~L~~~~yl~Gd~~T~ADi~l~~~~~~~~~--~--~~--~~~~~P-~l~~w~~r~~~~~P~~~e~ 111 (125)
T d1v2aa1 53 EQFVTERAYAAADHLTVADICLLGTVTALNW--L--KH--DLEPFP-HIRAWLERVRAEMPDYEEF 111 (125)
T ss_dssp HHHHHHSSSSSSSSCCHHHHHHHHHHHGGGT--T--TC--CCTTCH-HHHHHHHHHHTTSTTHHHH
T ss_pred HHHhCCCCccCCCCCcHHHHHHHHHHHHHHH--c--CC--CcccCH-HHHHHHHHHHHhCchHHHH
Confidence 4444446777765 99999998887654321 1 11 112222 2577888887777998753
No 9
>d1ufba_ a.24.16.3 (A:) Hypothetical protein TT1696 {Thermus thermophilus [TaxId: 274]}
Probab=7.13 E-value=25 Score=23.67 Aligned_cols=84 Identities=15% Similarity=0.028 Sum_probs=50.5
Q ss_pred hhHHHHHHHHHHHHHhhhhccCccCCCCCCCCCCCCcccChhhhhhchHhhhcCceEEEecCCCCCCCCCC-----CCC-
Q 039479 16 WVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYEEGEPPMFHDG-----PCK- 89 (182)
Q Consensus 16 ~~~~~l~~ar~~i~~a~~~~~~~~~~~~~~~~~~~~~y~n~~~f~~sy~~m~~~lKIYVY~lg~pp~~h~~-----~~~- 89 (182)
+.++=|.+|+.-++.|-..-+ +..| +...|+ +++..|+-+|=..+..|.+|.-|+- .+.
T Consensus 3 ~a~~Wl~~A~~dL~~A~~~~~-------------~~~y-~~a~f~-~qQavEk~lKAll~~~g~~pktH~l~~L~~~l~~ 67 (127)
T d1ufba_ 3 RARDWLEQARHNLRHAQGSLG-------------LGDY-AWACFA-AQQAAEAALKGLHLARGQVAWGHSILDLLADLPE 67 (127)
T ss_dssp THHHHHHHHHHHHHHHHHHHH-------------HTCH-HHHHHH-HHHHHHHHHHHHHHHTTCCCCSSCHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHh-------------CCch-HHHHHH-HHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Confidence 456677788888877765211 1123 455666 6778888888777778899988852 121
Q ss_pred -CchhhHHH-HHHHHhhCCCcccCCcCC
Q 039479 90 -SIYSTEGR-FIHEMERSNTYKTKDPEK 115 (182)
Q Consensus 90 -~~Ya~E~~-F~~~Ll~~s~~rT~DP~e 115 (182)
.....|.. ..+.|. .....|+-|+.
T Consensus 68 ~~~~~~~~~~~~~~L~-~~y~~~RYP~~ 94 (127)
T d1ufba_ 68 DVDVPEDLVEAAKVLD-KYYIPTRYPDA 94 (127)
T ss_dssp TSCCCHHHHHHHHHHH-TTSSTTTCGGG
T ss_pred hccCchHHHHHHHHHH-HHHHhhcCCCC
Confidence 11222322 334444 45678888865
No 10
>d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]}
Probab=6.65 E-value=1.5e+02 Score=19.80 Aligned_cols=14 Identities=7% Similarity=-0.054 Sum_probs=11.6
Q ss_pred CCCeEEEcCCCCCC
Q 039479 166 GADHFMLSCHDWVR 179 (182)
Q Consensus 166 GaDHf~v~cHD~g~ 179 (182)
|.+.+.+..|+||.
T Consensus 88 ~~~~~~lvGhS~Gg 101 (279)
T d1hkha_ 88 DLRDVVLVGFSMGT 101 (279)
T ss_dssp TCCSEEEEEETHHH
T ss_pred CcCccccccccccc
Confidence 56789999999983
Done!