BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039485
(367 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE++Q I F+ FD+NN G+LDY +++ + +L + DL++ DS ++Y
Sbjct: 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKY 78
Query: 135 QEFRRYMDDKEL------ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
+F M +K L E+ R FQ D +H G I + L + G + DEEL +
Sbjct: 79 DDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMI 138
Query: 189 ERVDKDNNGVITFEEW 204
E D D +G I E+
Sbjct: 139 EEFDLDGDGEINENEF 154
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ DG +++
Sbjct: 298 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 357
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 358 PEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 417
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 418 READIDGDGQVNYEEF 433
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 41/79 (51%)
Query: 66 VLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCD 125
+++A + E+ IR F FD + +GY+ A++ +++L + +++ D
Sbjct: 362 IMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 421
Query: 126 SNQDGRVEYQEFRRYMDDK 144
+ DG+V Y+EF + M K
Sbjct: 422 IDGDGQVNYEEFVQMMTAK 440
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ DG +++
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 135 QEFRRYM------DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF M D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 366 PEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 425
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 426 READIDGDGQVNYEEF 441
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 136 EFRRYMDDK 144
EF + M K
Sbjct: 440 EFVQMMTAK 448
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ DG +++
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 366 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 425
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 426 READIDGDGQVNYEEF 441
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 66 VLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCD 125
++A + E+ IR F FD + +GY+ A++ +++L + +++ D
Sbjct: 370 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 429
Query: 126 SNQDGRVEYQEFRRYMDDK 144
+ DG+V Y+EF + M K
Sbjct: 430 IDGDGQVNYEEFVQMMTAK 448
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ DG +++
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 135 QEFRRYM------DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF M D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 366 PEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 425
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 426 READIDGDGQVNYEEF 441
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 136 EFRRYMDDK 144
EF + M K
Sbjct: 440 EFVQMMTAK 448
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ DG +++
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 366
Query: 135 QEFRRYM------DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF M D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 367 PEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 426
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 427 READIDGDGQVNYEEF 442
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 136 EFRRYMDDK 144
EF + M K
Sbjct: 441 EFVQMMTAK 449
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 367 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 426
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 427 READIDGDGQVNYEEF 442
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 66 VLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCD 125
++A + E+ IR F FD + +GY+ A++ +++L + +++ D
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 430
Query: 126 SNQDGRVEYQEFRRYMDDK 144
+ DG+V Y+EF + M K
Sbjct: 431 IDGDGQVNYEEFVQMMTAK 449
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 121 LNVCDSNQDG-----RVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKA 175
L D +DG ++EY + +++ E F D + +G I +EL +
Sbjct: 281 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 340
Query: 176 GIEIDDEELATFVERVDKDNNGVITFEEW 204
G + EL + VD D NG I F E+
Sbjct: 341 GQNPTEAELQDMINEVDADGNGTIDFPEF 369
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A L D + DG + +E M + E EL + +D + NG I
Sbjct: 311 AEFKEAFSLF---DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 367
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWRDFLLLYPHEATMENI 220
E + + + D EE RV DKD NG I+ E R + + T E +
Sbjct: 368 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 308 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 367
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 368 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 427
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 428 READIDGDGQVNYEEF 443
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 66 VLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCD 125
++A + E+ IR F FD + +GY+ A++ +++L + +++ D
Sbjct: 372 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 431
Query: 126 SNQDGRVEYQEFRRYMDDK 144
+ DG+V Y+EF + M K
Sbjct: 432 IDGDGQVNYEEFVQMMTAK 450
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 121 LNVCDSNQDG-----RVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKA 175
L D +DG ++EY + +++ E F D + +G I +EL +
Sbjct: 282 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 341
Query: 176 GIEIDDEELATFVERVDKDNNGVITFEEW 204
G + EL + VD D NG I F E+
Sbjct: 342 GQNPTEAELQDMINEVDADGNGTIDFPEF 370
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A L D + DG + +E M + E EL + +D + NG I
Sbjct: 312 AEFKEAFSLF---DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 368
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWRDFLLLYPHEATMENI 220
E + + + D EE RV DKD NG I+ E R + + T E +
Sbjct: 369 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 423
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 367 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 426
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 427 READIDGDGQVNYEEF 442
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 66 VLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCD 125
++A + E+ IR F FD + +GY+ A++ +++L + +++ D
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 430
Query: 126 SNQDGRVEYQEFRRYMDDK 144
+ DG+V Y+EF + M K
Sbjct: 431 IDGDGQVNYEEFVQMMTAK 449
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 121 LNVCDSNQDG-----RVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKA 175
L D +DG ++EY + +++ E F D + +G I +EL +
Sbjct: 281 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 340
Query: 176 GIEIDDEELATFVERVDKDNNGVITFEEW 204
G + EL + VD D NG I F E+
Sbjct: 341 GQNPTEAELQDMINEVDADGNGTIDFPEF 369
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A L D + DG + +E M + E EL + +D + NG I
Sbjct: 311 AEFKEAFSLF---DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 367
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWRDFLLLYPHEATMENI 220
E + + + D EE RV DKD NG I+ E R + + T E +
Sbjct: 368 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 135 QEFRRYM------DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF M D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 367 PEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 426
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 427 READIDGDGQVNYEEF 442
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 136 EFRRYMDDK 144
EF + M K
Sbjct: 441 EFVQMMTAK 449
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 121 LNVCDSNQDG-----RVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKA 175
L D +DG ++EY + +++ E F D + +G I +EL +
Sbjct: 281 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 340
Query: 176 GIEIDDEELATFVERVDKDNNGVITFEEW 204
G + EL + VD D NG I F E+
Sbjct: 341 GQNPTEAELQDMINEVDADGNGTIDFPEF 369
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGI-LP 165
+E+K A L D + DG + +E M + E EL + +D + NG I P
Sbjct: 311 AEFKEAFSLF---DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 367
Query: 166 EELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFLLLYPHEATMENI 220
E L K +EE+ DKD NG I+ E R + + T E +
Sbjct: 368 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 134 YQEF----RRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVE 189
+ EF R M D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 65 FPEFLTMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 124
Query: 190 RVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 125 EADIDGDGQVNYEEF 139
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 52 NPVKKAGT-SVTMEHVLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI 110
N V G ++ L + ++ E+ IR F FD + +G++ A++ +++L
Sbjct: 53 NEVDADGNGTIDFPEFLTMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 112
Query: 111 PSEYKYARDLLNVCDSNQDGRVEYQEFRRYMDDK 144
+ +++ D + DG+V Y+EF M K
Sbjct: 113 KLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 146
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGI-LP 165
+E+K A ++ D + DG + +E M + E EL + +D + NG I P
Sbjct: 10 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 166 EELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFLLLYPHEATMENIYHYL 224
E + ++ ++ +EE+ DKD NG I+ E R + + T E + +
Sbjct: 67 E--FLTMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 123
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 135 QEFRRYM------DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF M D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 367 PEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 426
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 427 READIDGDGQVNYEEF 442
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 136 EFRRYMDDK 144
EF + M K
Sbjct: 441 EFVQMMTAK 449
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 121 LNVCDSNQDG-----RVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKA 175
L D +DG ++EY + +++ E F D + +G I +EL +
Sbjct: 281 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 340
Query: 176 GIEIDDEELATFVERVDKDNNGVITFEEW 204
G + EL + VD D NG I F E+
Sbjct: 341 GQNPTEAELQDMINEVDADGNGTIDFPEF 369
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A L D + DG + +E M + E EL + +D + NG I
Sbjct: 311 AEFKEAFSLF---DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 367
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWRDFLLLYPHEATMENI 220
E + + + D EE RV DKD NG I+ E R + + T E +
Sbjct: 368 EFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 270 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 329
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 330 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 389
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 390 READIDGDGQVNYEEF 405
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%)
Query: 66 VLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCD 125
++A + E+ IR F FD + +GY+ A++ +++L + +++ D
Sbjct: 334 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 393
Query: 126 SNQDGRVEYQEFRRYM 141
+ DG+V Y+EF + M
Sbjct: 394 IDGDGQVNYEEFVQMM 409
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 121 LNVCDSNQDG-----RVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKA 175
L D +DG ++EY + +++ E F D + +G I +EL +
Sbjct: 244 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 303
Query: 176 GIEIDDEELATFVERVDKDNNGVITFEEW 204
G + EL + VD D NG I F E+
Sbjct: 304 GQNPTEAELQDMINEVDADGNGTIDFPEF 332
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A L D + DG + +E M + E EL + +D + NG I
Sbjct: 274 AEFKEAFSLF---DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 330
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWRDFLLLYPHEATMENI 220
E + + + D EE RV DKD NG I+ E R + + T E +
Sbjct: 331 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 385
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE++Q IR F+ FD + SG +D +++ + +L + + + ++ D + G +++
Sbjct: 4 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDF 63
Query: 135 QEFRRYMD------DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
+EF + M D E+ + F+ D + G I + L + G + DEEL +
Sbjct: 64 EEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMI 123
Query: 189 ERVDKDNNGVITFEEW 204
+ D+D +G + EE+
Sbjct: 124 DEADRDGDGEVNEEEF 139
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 55 KKAGTSVTMEHVLLALGESKEEREQR--IRALFNFFDVNNSGYLDYAKIEAGLSSLNIPS 112
K ++ E L + ER+ R I F FD + +G + + ++ L
Sbjct: 55 KDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENM 114
Query: 113 EYKYARDLLNVCDSNQDGRVEYQEFRRYM 141
+ +++++ D + DG V +EF R M
Sbjct: 115 TDEELQEMIDEADRDGDGEVNEEEFFRIM 143
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 333 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 392
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 393 READIDGDGQVNYEEF 408
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 66 VLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCD 125
++A + E+ IR F FD + +GY+ A++ +++L + +++ D
Sbjct: 337 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 396
Query: 126 SNQDGRVEYQEFRRYMDDK 144
+ DG+V Y+EF + M K
Sbjct: 397 IDGDGQVNYEEFVQMMTAK 415
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 131 RVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVER 190
++EY + +++ E F D + +G I +EL + G + EL +
Sbjct: 262 KLEYNSRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE 321
Query: 191 VDKDNNGVITFEEW 204
VD D NG I F E+
Sbjct: 322 VDADGNGTIDFPEF 335
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A L D + DG + +E M + E EL + +D + NG I
Sbjct: 277 AEFKEAFSLF---DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 333
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWRDFLLLYPHEATMENI 220
E + + + D EE RV DKD NG I+ E R + + T E +
Sbjct: 334 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 333 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 392
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 393 READIDGDGQVNYEEF 408
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 66 VLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCD 125
++A + E+ IR F FD + +GY+ A++ +++L + +++ D
Sbjct: 337 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 396
Query: 126 SNQDGRVEYQEFRRYMDDK 144
+ DG+V Y+EF + M K
Sbjct: 397 IDGDGQVNYEEFVQMMTAK 415
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 131 RVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVER 190
++EY + +++ E F D + +G I +EL + G + EL +
Sbjct: 262 KLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE 321
Query: 191 VDKDNNGVITFEEW 204
VD D NG I F E+
Sbjct: 322 VDADGNGTIDFPEF 335
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A L D + DG + +E M + E EL + +D + NG I
Sbjct: 277 AEFKEAFSLF---DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 333
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWRDFLLLYPHEATMENI 220
E + + + D EE RV DKD NG I+ E R + + T E +
Sbjct: 334 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 82 RALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRYM 141
+ F FD + G + ++ + SL+ + +D+++ D++ +G +E+ EF M
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Query: 142 ------DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDN 195
D E EL F+ D + NG I EL H ++ G ++ DEE+ ++ D D
Sbjct: 73 AKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDG 132
Query: 196 NGVITFEEWRDFLL 209
+G + +EE+ ++
Sbjct: 133 DGQVNYEEFVKMMM 146
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Query: 125 DSNQDGRVEYQEFR---RYMDDK--ELELYRIFQAIDVEHNGGILPEELYHALVKAGIEI 179
D + DG + +E R +D E EL + +D + NG I +E + K +
Sbjct: 20 DKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKVKDT 79
Query: 180 D-DEELATFVERVDKDNNGVITFEEWRDFLLLYPHEATMENIYHYLERVCL 229
D +EEL + DKD NG I+ E R ++ + T E + ++ L
Sbjct: 80 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADL 130
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 33/64 (51%)
Query: 78 EQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF 137
E+ ++ F FD + +GY+ +++ + +L + ++ D + DG+V Y+EF
Sbjct: 82 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 141
Query: 138 RRYM 141
+ M
Sbjct: 142 VKMM 145
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ DG ++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGDGTID 64
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 136 EFRRYM 141
EF + M
Sbjct: 140 EFVQMM 145
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 82 RALFNFFDVNNSGYLDYAKIEAGLSSL-NIPSEYKYARDLLNVCDSNQDGRVEYQEF--- 137
+ F+ FD + G + ++ + SL P+E + +D++N D++ +G +++ EF
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTIDFPEFLNL 72
Query: 138 --RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKD 194
R+ D D E EL F+ D + NG I EL H + G ++ DEE+ + D D
Sbjct: 73 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 132
Query: 195 NNGVITFEEW 204
+G I +EE+
Sbjct: 133 GDGQINYEEF 142
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/75 (21%), Positives = 39/75 (52%)
Query: 67 LLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDS 126
L+A + E+ ++ F FD + +G++ A++ +++L + +++ D
Sbjct: 72 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131
Query: 127 NQDGRVEYQEFRRYM 141
+ DG++ Y+EF + M
Sbjct: 132 DGDGQINYEEFVKVM 146
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 139 RYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGV 198
+ DD+ E F D + +G I +EL + G + EL + VD D NG
Sbjct: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 199 ITFEEWRDFL 208
I F E+ + +
Sbjct: 64 IDFPEFLNLM 73
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
SE+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 11 SEFKEA---FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + + D EE RV DKD NG I+ E R
Sbjct: 68 EFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 107
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL RD+++ D + +G V++
Sbjct: 6 EEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDF 65
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R+ D D E E+ F+ D + NG + EL H + + G ++ DEE+ +
Sbjct: 66 PEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMI 125
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 126 RAADTDGDGQVNYEEF 141
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +G++ A++ ++ L + +++ D++ DG+V Y+
Sbjct: 80 DNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYE 139
Query: 136 EFRRYM 141
EF R +
Sbjct: 140 EFVRVL 145
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + ID + NG +
Sbjct: 10 TEFKEA---FSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFP 66
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D+EE RV DKD NG ++ E R
Sbjct: 67 EFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELR 106
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 58 GTSVTMEHVLLALGE--SKEEREQRIRALFNFFDVNNSGYLDYAKIEAGL---------- 105
GT + LL +G + ++ + + A+F+ D N G LD A++ G
Sbjct: 335 GTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQD 394
Query: 106 -SSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRY-MDDKEL----ELYRIFQAIDVEH 159
S L+ + +L+ D +++G +EY EF MD K L L R F+ D ++
Sbjct: 395 ASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDN 454
Query: 160 NGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFLL 209
+G I EL A + ++D E + + VDK+N+G + F+E++ LL
Sbjct: 455 SGKISSTEL--ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 502
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 58 GTSVTMEHVLLALGE--SKEEREQRIRALFNFFDVNNSGYLDYAKIEAGL---------- 105
GT + LL +G + ++ + + A+F+ D N G LD A++ G
Sbjct: 336 GTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQD 395
Query: 106 -SSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRY-MDDKEL----ELYRIFQAIDVEH 159
S L+ + +L+ D +++G +EY EF MD K L L R F+ D ++
Sbjct: 396 ASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDN 455
Query: 160 NGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFLL 209
+G I EL A + ++D E + + VDK+N+G + F+E++ LL
Sbjct: 456 SGKISSTEL--ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 503
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 73 SKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGR 131
+ EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G
Sbjct: 2 ATEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGT 60
Query: 132 VEYQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELA 185
+++ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 186 TFVERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 121 EMIREADIDGDGQVNYEEF 139
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 136 EFRRYM 141
EF + M
Sbjct: 138 EFVQMM 143
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 8 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWRDFLLLYPHEATMENIYHYL 224
E + + + D EE RV DKD NG I+ E R + + T E + +
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 123
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%)
Query: 66 VLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCD 125
++A + E+ IR F FD + +GY+ A++ +++L + +++ D
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 126 SNQDGRVEYQEFRRYM 141
+ DG+V Y+EF + M
Sbjct: 131 IDGDGQVNYEEFVQMM 146
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 11 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWRDFLLLYPHEATMENIYHYL 224
E + + + D EE RV DKD NG I+ E R + + T E + +
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 126
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSL-NIPSEYKYARDLLNVCDSNQDGRVE 133
E++ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 7 EDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E EL F+ D + NG I EL H + G ++ DEE+
Sbjct: 66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G I ++E+
Sbjct: 126 IREADVDGDGQINYDEF 142
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/75 (21%), Positives = 38/75 (50%)
Query: 67 LLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDS 126
L+A + E+ ++ F FD + +G++ A++ +++L + +++ D
Sbjct: 72 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131
Query: 127 NQDGRVEYQEFRRYM 141
+ DG++ Y EF + M
Sbjct: 132 DGDGQINYDEFVKVM 146
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
SE+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 11 SEFKEA---FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + + D EE RV DKD NG I+ E R
Sbjct: 68 EFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 107
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRD 206
E F D + +G I +EL + G + EL + VD D NG I F E+ +
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
Query: 207 FL 208
+
Sbjct: 72 LM 73
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +G++ A++ +++L + +++ D + DG+V Y+
Sbjct: 80 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 136 EFRRYMDDK 144
EF M K
Sbjct: 140 EFVTMMTSK 148
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 10 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 106
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +G++ A++ +++L + +++ D + DG+V Y+
Sbjct: 80 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 136 EFRRYM 141
EF M
Sbjct: 140 EFVTMM 145
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 10 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 106
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +G++ A++ +++L + +++ D + DG+V Y+
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 136 EFRRYMDDK 144
EF M K
Sbjct: 141 EFVTMMTSK 149
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 11 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 107
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 58 GTSVTMEHVLLALGE--SKEEREQRIRALFNFFDVNNSGYLDYAKIEAGL---------- 105
GT + LL +G + ++ + + A+F+ D N G LD A++ G
Sbjct: 312 GTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQD 371
Query: 106 -SSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRY-MDDKEL----ELYRIFQAIDVEH 159
S L+ + +L+ D +++G +EY EF MD K L L R F+ D ++
Sbjct: 372 ASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDN 431
Query: 160 NGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFLL 209
+G I EL A + ++D E + + VDK+N+G + F+E++ LL
Sbjct: 432 SGKISSTEL--ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 479
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQM 125
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 35/66 (53%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + ++ D + DG+V Y+
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYE 140
Query: 136 EFRRYM 141
EF + M
Sbjct: 141 EFVQMM 146
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 11 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWRDFLLLYPHEATMENIYHYL 224
E + + + D EE RV DKD NG I+ E R + + T E + +
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMI 126
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +G++ A++ +++L + +++ D + DG+V Y+
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 136 EFRRYM 141
EF M
Sbjct: 141 EFVTMM 146
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 11 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 107
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 8 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 66
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 67 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 126
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 127 IREADIDGDGQVNYEEF 143
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 82 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 141
Query: 136 EFRRYM 141
EF + M
Sbjct: 142 EFVQMM 147
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 12 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 68
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 69 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 108
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 136 EFRRYM 141
EF + M
Sbjct: 141 EFVQMM 146
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 11 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 136 EFRRYM 141
EF + M
Sbjct: 141 EFVQMM 146
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 11 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSL-NIPSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 10 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 68
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 128
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 129 IREADIDGDGQVNYEEF 145
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 84 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
Query: 136 EFRRYM 141
EF + M
Sbjct: 144 EFVQMM 149
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 14 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 70
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 71 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 110
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 3 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 63 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 122
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 123 READIDGDGQVNYEEF 138
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 77 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 136
Query: 136 EFRRYM 141
EF + M
Sbjct: 137 EFVQMM 142
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 7 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 63
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 64 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 103
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 82 RALFNFFDVNNSGYLDYAKIEAGLSSL-NIPSEYKYARDLLNVCDSNQDGRVEYQEF--- 137
+ F+ FD + G + ++ + SL P+E + +D++N D++ +G +++ EF
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTIDFPEFLNL 71
Query: 138 --RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKD 194
R+ D D E EL F+ D + NG I EL H + G ++ DEE+ + D D
Sbjct: 72 MARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 131
Query: 195 NNGVITFEEW 204
+G + +EE+
Sbjct: 132 GDGQVNYEEF 141
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 39/75 (52%)
Query: 67 LLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDS 126
L+A + E+ ++ F FD + +G++ A++ +++L + +++ D
Sbjct: 71 LMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 130
Query: 127 NQDGRVEYQEFRRYM 141
+ DG+V Y+EF + M
Sbjct: 131 DGDGQVNYEEFVQVM 145
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 10 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWRDFLLLYPHEATMENIYHYL 224
E + + + + D EE RV DKD NG I+ E R + + T E + +
Sbjct: 67 EFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 125
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 139 RYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGV 198
+ D++ E F D + +G I +EL + G + EL + VD D NG
Sbjct: 3 QLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 199 ITFEEWRDFL 208
I F E+ + +
Sbjct: 63 IDFPEFLNLM 72
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 62 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 121
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 122 READIDGDGQVNYEEF 137
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 76 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 135
Query: 136 EFRRYM 141
EF + M
Sbjct: 136 EFVQMM 141
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 6 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 63 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 102
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 64 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 123
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 124 READIDGDGQVNYEEF 139
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 136 EFRRYM 141
EF + M
Sbjct: 138 EFVQMM 143
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 8 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 104
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 64 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 123
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 124 READIDGDGQVNYEEF 139
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 136 EFRRYM 141
EF + M
Sbjct: 138 EFVQMM 143
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 8 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 104
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 136 EFRRYM 141
EF + M
Sbjct: 141 EFVQMM 146
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 11 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 12 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 70
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 71 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 130
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 131 IREADIDGDGQVNYEEF 147
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 86 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 145
Query: 136 EFRRYM 141
EF + M
Sbjct: 146 EFVQMM 151
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 16 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 72
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 73 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 112
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE++Q I F+ FD NN G+LDY +++ +L + DL++ DS +Y
Sbjct: 19 EEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKY 78
Query: 135 QEFRRYMDDKEL------ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
+F +K L E+ R FQ D +H G I + L + G + DEEL +
Sbjct: 79 DDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXI 138
Query: 189 ERVDKDNNGVITFEEW 204
E D D +G I E+
Sbjct: 139 EEFDLDGDGEINENEF 154
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 136 EFRRYM 141
EF + M
Sbjct: 140 EFVQMM 145
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 10 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 82 RALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF---- 137
+ F+ FD + G + ++ + SL +D++N D++ +G +++ EF
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 69
Query: 138 -RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDN 195
R+ D D E EL F+ D + NG I EL H + G ++ DEE+ + D D
Sbjct: 70 ARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 129
Query: 196 NGVITFEEW 204
+G + +EE+
Sbjct: 130 DGQVNYEEF 138
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 39/75 (52%)
Query: 67 LLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDS 126
L+A + E+ ++ F FD + +G++ A++ +++L + +++ D
Sbjct: 68 LMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 127
Query: 127 NQDGRVEYQEFRRYM 141
+ DG+V Y+EF + M
Sbjct: 128 DGDGQVNYEEFVQVM 142
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 7 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 63
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + + D EE RV DKD NG I+ E R
Sbjct: 64 EFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELR 103
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 142 DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITF 201
D++ E F D + +G I +EL + G + EL + VD D NG I F
Sbjct: 3 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
Query: 202 EEWRDFL 208
E+ + +
Sbjct: 63 PEFLNLM 69
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 136 EFRRYM 141
EF + M
Sbjct: 140 EFVQMM 145
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 10 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSL-NIPSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 125
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 126 IRESDIDGDGQVNYEEF 142
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +G++ A++ +++L + +++ D + DG+V Y+
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYE 140
Query: 136 EFRRYMDDK 144
EF M K
Sbjct: 141 EFVTMMTSK 149
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 11 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 107
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 5 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 64
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 65 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 124
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 125 READIDGDGQVNYEEF 140
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 79 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 138
Query: 136 EFRRYM 141
EF + M
Sbjct: 139 EFVQMM 144
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 9 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 65
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 66 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 105
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 65
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G + DEE+
Sbjct: 66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEM 125
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 126 IREADIDGDGQVNYEEF 142
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYE 140
Query: 136 EFRRYM 141
EF + M
Sbjct: 141 EFVQMM 146
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 11 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G + DEE+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEM 124
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 125 IREADIDGDGQVNYEEF 141
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYE 139
Query: 136 EFRRYM 141
EF + M
Sbjct: 140 EFVQMM 145
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 10 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
E EE+ + F FD + G + ++ + SL +D++N D++ +G
Sbjct: 3 ELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 132 VEYQEFRRYM------DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELA 185
+++ EF M D E EL F+ D + NG I EL H + G ++ D+E+
Sbjct: 63 IDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVD 122
Query: 186 TFVERVDKDNNGVITFEEW 204
+ D D +G I +EE+
Sbjct: 123 EMIREADIDGDGHINYEEF 141
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 37/75 (49%)
Query: 67 LLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDS 126
L+A +++ E+ + F FD + +G + A++ +++L +++ D
Sbjct: 71 LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 130
Query: 127 NQDGRVEYQEFRRYM 141
+ DG + Y+EF R M
Sbjct: 131 DGDGHINYEEFVRMM 145
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGI-LP 165
+E+K A + D + DG + +E M + E EL + +D + NG I P
Sbjct: 10 AEFKEA---FALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 166 EELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWR 205
E L K + +EEL + D+D NG+I+ E R
Sbjct: 67 EFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELR 106
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 135 QEFRRYM------DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF M D E EL F+ D + NG I EL H + G ++ D+E+ +
Sbjct: 66 PEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMI 125
Query: 189 ERVDKDNNGVITFEEW 204
D D +G I +EE+
Sbjct: 126 READIDGDGHINYEEF 141
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 37/75 (49%)
Query: 67 LLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDS 126
L+A +++ E+ + F FD + +G + A++ +++L +++ D
Sbjct: 71 LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 130
Query: 127 NQDGRVEYQEFRRYM 141
+ DG + Y+EF R M
Sbjct: 131 DGDGHINYEEFVRMM 145
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGI-LP 165
+E+K A + D + DG + +E M + E EL + +D + NG I P
Sbjct: 10 AEFKEA---FALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 166 EELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWR 205
E L K + +EEL + D+D NG+I+ E R
Sbjct: 67 EFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELR 106
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE++Q IR F+ FD + SG +D +++ + +L + + + +++ D + G +++
Sbjct: 24 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 83
Query: 135 QEFRRYMD------DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
+EF M D E+ + F+ D +++G I ++L + G + +EEL +
Sbjct: 84 EEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMI 143
Query: 189 ERVDKDNNGVITFEEW 204
D++++ I +E+
Sbjct: 144 AEADRNDDNEIDEDEF 159
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE++Q IR F+ FD + +G +D +++ + +L + + + +++ D G++ +
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
Query: 135 QEFRRYM-------DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+F M D KE E+ + F+ D + G I + L + G + DEEL
Sbjct: 62 GDFLTVMTQKMSEKDTKE-EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 188 VERVDKDNNGVITFEEW 204
++ D+D +G ++ +E+
Sbjct: 121 IDEADRDGDGEVSEQEF 137
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 34/69 (49%)
Query: 73 SKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRV 132
S+++ ++ I F FD + +G + + ++ L + +++++ D + DG V
Sbjct: 73 SEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 132
Query: 133 EYQEFRRYM 141
QEF R M
Sbjct: 133 SEQEFLRIM 141
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F FD +NSG + +++ + SL + PSE + A DL+N D + + +E
Sbjct: 7 EEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVA-DLMNEIDVDGNHAIE 65
Query: 134 YQEFRRYM------DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF M +D E EL F+ D +G I EL H L G ++ D E+
Sbjct: 66 FSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEM 125
Query: 188 VERVDKDNNGVITFEEWRDFL 208
+ V D +G I +++ L
Sbjct: 126 LREV-SDGSGEINIKQFAALL 145
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 82 RALFNFFDVNNSGYLDYAKIEAGLSSL-NIPSEYKYARDLLNVCDSNQDGRVEYQEF--- 137
+ F+ FD + G + ++ + SL P+E + +D++N D++ +G +++ EF
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTIDFPEFLNL 71
Query: 138 --RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKD 194
R+ D D E +L F+ D + NG I EL H + G ++ DEE+ + D D
Sbjct: 72 MARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 131
Query: 195 NNGVITFEEW 204
+G + +EE+
Sbjct: 132 GDGQVNYEEF 141
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%)
Query: 67 LLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDS 126
L+A + E++++ F FD + +G++ A++ +++L + +++ D
Sbjct: 71 LMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 130
Query: 127 NQDGRVEYQEFRRYM 141
+ DG+V Y+EF + M
Sbjct: 131 DGDGQVNYEEFVQVM 145
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 10 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWRDFLLLYPHEATMENIYHYL 224
E + + + + D EE RV DKD NG I+ E R + + T E + +
Sbjct: 67 EFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 125
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 139 RYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGV 198
+ D++ E F D + +G I +EL + G + EL + VD D NG
Sbjct: 3 QLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 199 ITFEEWRDFL 208
I F E+ + +
Sbjct: 63 IDFPEFLNLM 72
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSL-NIPSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ + SL P+E + +D++N D++ +G ++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTID 64
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H + G ++ DEE+
Sbjct: 65 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 124
Query: 188 VERVDKDNNGVITFEEW 204
+ + D +G + +EE+
Sbjct: 125 IREANIDGDGQVNYEEF 141
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ + + DG+V Y+
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYE 139
Query: 136 EFRRYM 141
EF + M
Sbjct: 140 EFVQMM 145
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 10 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 167 ELYHALVKAGIEIDDEELATFVERV-DKDNNGVITFEEWR 205
E + + + D EE RV DKD NG I+ E R
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 135 QEF-----RRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVE 189
EF R+ D E+ F+ D + NG I EL H + G ++ DEE+ +
Sbjct: 62 PEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 121
Query: 190 RVDKDNNGVITFEEW 204
+ D +G + +EE+
Sbjct: 122 EANIDGDGQVNYEEF 136
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 74 KEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVE 133
K+ + IR F FD + +GY+ A++ +++L + +++ + + DG+V
Sbjct: 73 KDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVN 132
Query: 134 YQEFRRYM 141
Y+EF + M
Sbjct: 133 YEEFVQMM 140
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEFRRYM-----DDKELELYRIFQAIDVEHNGGILPE 166
+E+K A ++ D + DG + +E M + E EL + +D + NG I
Sbjct: 6 AEFKEA---FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 167 ELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWR 205
E + + + D EE+ DKD NG I+ E R
Sbjct: 63 EFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELR 101
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F FD +N+G + +++ + SL + DL+N D + + ++E+
Sbjct: 7 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 66
Query: 135 QEFRRYM------DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF M +D E EL F+ D +G I EL H L G ++ D E+ +
Sbjct: 67 SEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDML 126
Query: 189 ERVDKDNNGVITFEEWRDFL 208
V D +G I +++ L
Sbjct: 127 REV-SDGSGEINIQQFAALL 145
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 58 GTSVTMEHVLLALGE--SKEEREQRIRALFNFFDVNNSGYLDYAKIEAGL---------- 105
GT + LL G + ++ + + A+F+ D N G LD A++ G
Sbjct: 312 GTQKLAQAALLYXGSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQD 371
Query: 106 -SSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRYMDDKEL-----ELYRIFQAIDVEH 159
S L+ + +L+ D +++G +EY EF D++ L R F+ D ++
Sbjct: 372 ASXLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDN 431
Query: 160 NGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFLL 209
+G I EL A + ++D E + + VDK+N+G + F+E++ LL
Sbjct: 432 SGKISSTEL--ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXLL 479
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH
Carboxyatractyloside
pdb|2C3E|A Chain A, The Bovine Mitochondrial Adp-Atp Carrier
Length = 297
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 9/87 (10%)
Query: 252 LIAGGVAGATSRTATAPLDRLKVVLQVQTTRAH---------IMPAIRDIWRDGGISGFF 302
+AGGVA A S+TA AP++R+K++LQVQ I+ + I ++ G F+
Sbjct: 11 FLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFW 70
Query: 303 RGNGLNVLKVAPESAIKFYTYERLKKL 329
RGN NV++ P A+ F ++ K++
Sbjct: 71 RGNLANVIRYFPTQALNFAFKDKYKQI 97
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 241 GISKHVHANRY----LIAGGVAGATSRTATAPLD--RLKVVLQVQTTRAH-----IMPAI 289
G+ +H RY L +GG AGATS PLD R ++ V A + I
Sbjct: 101 GVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCI 160
Query: 290 RDIWRDGGISGFFRGNGLNVLKVAPESAIKFYTYERLKKLI 330
I++ G+ G ++G ++V + A F Y+ K ++
Sbjct: 161 TKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGML 201
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 79 QRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF- 137
+++++ F D + GY+ +++ GL + Y + LL+ DS+ G+++Y EF
Sbjct: 52 EKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL-LLDQIDSDGSGKIDYTEFI 110
Query: 138 RRYMDDKELE---LYRIFQAIDVEHNGGILPEELYHALVKAG-----IEIDDEELATFVE 189
+D K+L +Y F+ DV+++G I EL H L + D + +
Sbjct: 111 AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIR 170
Query: 190 RVDKDNNGVITFEEWRDFLLL 210
VDK+N+G I F E+ + + L
Sbjct: 171 DVDKNNDGKIDFHEFSEMMKL 191
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 52 NPVKKAGTSVTMEHVLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIP 111
N KK V E + EE ++ FN D + SG + + +++AGL +
Sbjct: 7 NKFKKXALRVIAESL-------SEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGAN 59
Query: 112 SEYKYARDLLNVCDSNQDGRVEYQEF---RRYMD--DKELELYRIFQAIDVEHNGGILPE 166
+ DL D + G ++Y+EF +++ ++E L+ F D + +G I P+
Sbjct: 60 LKESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPD 119
Query: 167 ELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
EL A + G+E D + VD+DN+G I + E+
Sbjct: 120 ELQQACEEFGVE--DVRIEELXRDVDQDNDGRIDYNEF 155
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F FD +N+G + +++ + SL + DL+N D + + ++E+
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 135 QEFRRYM------DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF M +D E EL F+ D +G I EL H L G ++ D E+ +
Sbjct: 66 SEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDML 125
Query: 189 ERVDKDNNGVITFEEWRDFL 208
V D +G I +++ L
Sbjct: 126 REV-SDGSGEINIQQFAALL 144
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 63 MEHVLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAG--------------LSSL 108
M L L E+KE + +F D N G LD ++ G L S
Sbjct: 303 MGSKLTTLEETKE-----LTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSS 357
Query: 109 NIPSEYKYARDLLNVCDSNQDGRVEYQEFRRYMDDKELELYR-----IFQAIDVEHNGGI 163
I +E + +L D +++G +EY EF DK+L L R FQ D + +G I
Sbjct: 358 QIEAEVDH---ILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKI 414
Query: 164 LPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFL 208
EEL E+DDE ++ DK+N+G + FEE+ + +
Sbjct: 415 TNEELGRLF--GVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMM 457
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 63 MEHVLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAG--------------LSSL 108
M L L E+KE + +F D N G LD ++ G L S
Sbjct: 29 MGSKLTTLEETKE-----LTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSS 83
Query: 109 NIPSEYKYARDLLNVCDSNQDGRVEYQEFRRYMDDKELELYR-----IFQAIDVEHNGGI 163
I +E + +L D +++G +EY EF DK+L L R FQ D + +G I
Sbjct: 84 QIEAEVDH---ILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKI 140
Query: 164 LPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFL 208
EEL E+DDE ++ DK+N+G + FEE+ + +
Sbjct: 141 TNEELGRLF--GVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMM 183
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 63 MEHVLLALGESKEEREQRIRALFNFFDVNNSGYLD----------YAKIEAGLSSLNIPS 112
M L L E+K+ E +F D NN G LD + +++ S+ I +
Sbjct: 320 MASKLTTLDETKQLTE-----IFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQN 374
Query: 113 EYKYARD----LLNVCDSNQDGRVEYQEFRRYMDDKEL-----ELYRIFQAIDVEHNGGI 163
E D L+ + D + G +EY EF D+ + + R F+ D + +G I
Sbjct: 375 EGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKI 434
Query: 164 LPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFL 208
+EL+ +A I EEL + +E+VD + +G + F E+ + L
Sbjct: 435 STKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 67/148 (45%), Gaps = 4/148 (2%)
Query: 79 QRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFR 138
Q + F D + SG + ++ A LSS +P LL++ D N G + + EF+
Sbjct: 27 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFK 86
Query: 139 RYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGV 198
+ L + F+ D +G + E+ AL+ +G ++ ++ + + D+ G
Sbjct: 87 D-LHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGS 145
Query: 199 ITFEEWRDFLLLYPHEATMENIYHYLER 226
+ F+ D++ L + N++ + +R
Sbjct: 146 LGFD---DYVELSIFVCRVRNVFAFYDR 170
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 139 RYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGV 198
R+M+D + EL F+A+D + +G I EL AL AG+ + DK+++G
Sbjct: 21 RHMNDNQ-ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGE 79
Query: 199 ITFEEWRD 206
ITF+E++D
Sbjct: 80 ITFDEFKD 87
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 82 RALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRY- 140
ALF DVN G + Y +++A +S + + + D++ +G ++ EF ++
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Query: 141 -------MDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDK 193
+ D ++ L +++ +DV+ +G + EE+ K GI E++A V + D
Sbjct: 63 GSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADA 118
Query: 194 DNNGVITFEEWRDFLL 209
+ +G IT EE+ +F L
Sbjct: 119 NGDGYITLEEFLEFSL 134
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 117 ARDLLNVCDSNQDGRVEYQEFRRYMDDK-----ELELYRIFQAIDVEHNGGILPEE---L 168
A L D N DG V Y+E + ++ K E L IF++ID + NG I E
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 169 YHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFLLLYPHEATMENI 220
Y ++ + D L + +D D +G +T EE F + E E +
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQV 113
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 82 RALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRY- 140
ALF DVN G + Y +++A +S + + + D++ +G ++ EF ++
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Query: 141 -------MDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDK 193
+ D ++ L +++ +DV+ +G + EE+ K GI E++A V + D
Sbjct: 63 GSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADA 118
Query: 194 DNNGVITFEEWRDFLL 209
+ +G IT EE+ +F L
Sbjct: 119 NGDGYITLEEFLEFSL 134
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 117 ARDLLNVCDSNQDGRVEYQEFRRYMDDK-----ELELYRIFQAIDVEHNGGILPEE---L 168
A L D N DG V Y+E + ++ K E L IF++ID + NG I E
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 169 YHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFLLLYPHEATMENI 220
Y ++ + D L + +D D +G +T EE F + E E +
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQV 113
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F FD +N+G + +++ + SL + DL+N D + + ++E+
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 135 QEFRRYM------DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEEL 184
EF M +D E EL F+ D +G I EL H L G ++ D EL
Sbjct: 66 SEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEL 121
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E F D ++NG I EL + G+ + E+ + +D D N I F E+
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ SL +D +N D++ +G +++
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 66
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R+ D D E E+ F+ D + NG I EL H G ++ DEE+ +
Sbjct: 67 PEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXI 126
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 127 READIDGDGQVNYEEF 142
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 22/167 (13%)
Query: 49 QWDNPVKKAGTSVTMEHVLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSL 108
+ +N +KK ++ +H+ + +R +F DV+NSG L +I GL +
Sbjct: 34 KKENELKKIALTIIAKHLC-------DVEINNLRNIFIALDVDNSGTLSSQEILDGLKKI 86
Query: 109 NI----PSEYKYARDLLNVCDSNQDGRVEYQEFRRYMDDKELELYR-----IFQAIDVEH 159
P ++ RD+ DSN G++ Y +F DK+ L + F+ D++
Sbjct: 87 GYQKIPPDIHQVLRDI----DSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDG 142
Query: 160 NGGILPEELYHALVKAGIE--IDDEELATFVERVDKDNNGVITFEEW 204
NG I EEL + IE + D+ + + ++ VD + +G I F E+
Sbjct: 143 NGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEF 189
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 85 FNFFDVNNSGYLDYAKIEA--GLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRYMD 142
F FFD++ +G + +++ G + P K LL D N DG +++ EF M
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMS 194
Query: 143 DKE 145
K+
Sbjct: 195 KKK 197
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVE 133
EE+ + F+ FD + G + ++ SL P+E + +D +N D++ +G ++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAEL-QDXINEVDADGNGTID 64
Query: 134 YQEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATF 187
+ EF R+ D D E E+ F+ D + NG I EL H G ++ DEE+
Sbjct: 65 FPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEX 124
Query: 188 VERVDKDNNGVITFEEW 204
+ D D +G + +EE+
Sbjct: 125 IREADIDGDGQVNYEEF 141
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 70 LGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQD 129
+ E EE+ + F FD +G + ++ + +L +DL+ ++N +
Sbjct: 1 MSELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNN 60
Query: 130 GRVEYQEFRRYM------DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEE 183
G++ + EF M D E E+ F+ D + +G I P EL ++ G ++ DEE
Sbjct: 61 GQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEE 120
Query: 184 LATFVERVDKDNNGVITFEEW 204
+ + D D +G+I +EE+
Sbjct: 121 IDEMIREADFDGDGMINYEEF 141
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 79 QRIRALFNFFDVNNSGYLDYAKIEAGL--SSLNIPSEYKYARDLLNVCDSNQDGRVEYQE 136
Q+++A F D G + ++ GL S L +P + LL+ DS+ G ++Y E
Sbjct: 55 QKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDL---LLDQIDSDGSGNIDYTE 111
Query: 137 F------RRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAG-----IEIDDEELA 185
F RR + K + Y F+ DV+++G I EL H L E D ++
Sbjct: 112 FLAAAIDRRQLSKKLI--YCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVK 169
Query: 186 TFVERVDKDNNGVITFEEWRDFLLL 210
+ VDK+ +G I F E+ + + L
Sbjct: 170 KMIREVDKNGDGKIDFYEFSEMMKL 194
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE ++ LF D +NSG + + +++ GL + +DL++ D ++ G ++Y
Sbjct: 6 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 65
Query: 135 QEF---RRYMD--DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVE 189
EF +++ ++E L F D + +G I +E+ A G +DD + ++
Sbjct: 66 GEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIK 123
Query: 190 RVDKDNNGVITFEEWRDFLLLYPHEA-----TMENIYHYLERVCLVDIGEQAAIP 239
+D+DN+G I + E+ + TM + + + LVD G I
Sbjct: 124 EIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDNGSNQVIE 178
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 53 PVKKAGTSVTMEHVLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPS 112
+ K+GT E + + +K ERE+ + + F++FD + SGY+ +I+ +
Sbjct: 56 DIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDD 115
Query: 113 EYKYARDLLNVCDSNQDGRVEYQEFRRYM 141
+ D++ D + DG+++Y EF M
Sbjct: 116 --IHIDDMIKEIDQDNDGQIDYGEFAAMM 142
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ SL +D +N D++ +G + +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINF 65
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
EF R D D E E+ F+ D + NG I EL H G ++ DEE+ +
Sbjct: 66 PEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXI 125
Query: 189 ERVDKDNNGVITFEEW 204
D D +G + +EE+
Sbjct: 126 READIDGDGQVNYEEF 141
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N ++ +G +++
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDF 366
Query: 135 QEF-----RRYMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
+F R+ D D E E+ F+ + NG I +L H + G ++ DEE+ +
Sbjct: 367 PQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMI 426
Query: 189 ERVDKDNNGVITFEEW 204
D +G + +E++
Sbjct: 427 REAGIDGDGQVNYEQF 442
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 121 LNVCDSNQDG-----RVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKA 175
L D +DG ++EY + +++ E F D + +GGI ++L +
Sbjct: 281 LKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSL 340
Query: 176 GIEIDDEELATFVERVDKDNNGVITFEEW 204
G + EL + V D NG I F ++
Sbjct: 341 GQNPTEAELQDMINEVGADGNGTIDFPQF 369
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 38/79 (48%)
Query: 66 VLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCD 125
++A + E+ IR F F + +GY+ A++ +++L + +++
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAG 430
Query: 126 SNQDGRVEYQEFRRYMDDK 144
+ DG+V Y++F + M K
Sbjct: 431 IDGDGQVNYEQFVQMMTAK 449
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 140 YMD-DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGV 198
+MD D E EL F+ D + NG I EL H ++ G ++ DEE+ ++ D D +G
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 199 ITFEEWRDFLL 209
+ +EE+ ++
Sbjct: 62 VNYEEFVKMMM 72
Score = 33.1 bits (74), Expect = 0.25, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 71 GESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDG 130
G + E+ ++ F FD + +GY+ +++ + +L + ++ D + DG
Sbjct: 1 GHMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDG 60
Query: 131 RVEYQEFRRYM 141
+V Y+EF + M
Sbjct: 61 QVNYEEFVKMM 71
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE++Q IR F+ FD + +G +D +++ +L + + + ++ D G+ +
Sbjct: 27 EEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNF 86
Query: 135 QEF------RRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
+F + D + E+ + F+ D + G I + L + G + DEEL +
Sbjct: 87 GDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXI 146
Query: 189 ERVDKDNNGVITFEEW 204
+ D+D +G ++ +E+
Sbjct: 147 DEADRDGDGEVSEQEF 162
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 45.8 bits (107), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
D E EL F+ D + NG I EL H ++ G ++ DEE+ ++ D D +G + +E
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 203 EWRDFLL 209
E+ ++
Sbjct: 61 EFVKMMM 67
Score = 32.3 bits (72), Expect = 0.48, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 34/66 (51%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ ++ F FD + +GY+ +++ + +L + ++ D + DG+V Y+
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 136 EFRRYM 141
EF + M
Sbjct: 61 EFVKMM 66
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 82 RALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF---- 137
+A F+ FD + G + ++ + L + ++ D + G ++++EF
Sbjct: 20 KAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
Query: 138 -RRYMDD----KELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVD 192
R+ +D E EL +F+ D +G I EEL +G + DEE+ + ++ D
Sbjct: 80 VRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGD 139
Query: 193 KDNNGVITFEEW 204
K+N+G I F+E+
Sbjct: 140 KNNDGRIDFDEF 151
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
++K + E+ + LF FD N GY+D ++ + + L+ D N DGR
Sbjct: 86 DAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGR 145
Query: 132 VEYQEFRRYMD 142
+++ EF + M+
Sbjct: 146 IDFDEFLKMME 156
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 45.1 bits (105), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
+SK + E+ + LF FD N GY+D +++ L + +L+ D N DGR
Sbjct: 8 DSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 67
Query: 132 VEYQEFRRYMDDKE 145
++Y EF +M E
Sbjct: 68 IDYDEFLEFMKGVE 81
Score = 35.4 bits (80), Expect = 0.055, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 145 ELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E EL +F+ D +G I EEL L G I ++++ ++ DK+N+G I ++E+
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
Query: 205 RDFL 208
+F+
Sbjct: 74 LEFM 77
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 44.7 bits (104), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
+SK + E+ + LF FD N GY+D +++ L + +L+ D N DGR
Sbjct: 3 DSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 62
Query: 132 VEYQEFRRYMDDKE 145
++Y EF +M E
Sbjct: 63 IDYDEFLEFMKGVE 76
Score = 35.0 bits (79), Expect = 0.074, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 145 ELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E EL +F+ D +G I EEL L G I ++++ ++ DK+N+G I ++E+
Sbjct: 9 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 68
Query: 205 RDFL 208
+F+
Sbjct: 69 LEFM 72
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 82 RALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF---- 137
+A F+ FD + G + ++ + L + ++ D + G ++++EF
Sbjct: 20 KAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
Query: 138 -RRYMDD----KELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVD 192
R+ +D E EL F+ D +G I EEL +G + DEE+ + ++ D
Sbjct: 80 VRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGD 139
Query: 193 KDNNGVITFEEW 204
K+N+G I F+E+
Sbjct: 140 KNNDGRIDFDEF 151
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
++K + E+ + F FD N GY+D ++ + + L+ D N DGR
Sbjct: 86 DAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGR 145
Query: 132 VEYQEFRRYMD 142
+++ EF + M+
Sbjct: 146 IDFDEFLKMME 156
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
+SK + E+ + LF FD N GY+D +++ L + +L+ D N DGR
Sbjct: 88 DSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 147
Query: 132 VEYQEFRRYM 141
++Y EF +M
Sbjct: 148 IDYDEFLEFM 157
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 118 RDLLNVCDSNQDGRVEYQEF-----RRYMDDK----ELELYRIFQAIDVEHNGGILPEEL 168
+++++ D + G V++ EF R DD E EL +F+ D +G I EEL
Sbjct: 58 QEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEEL 117
Query: 169 YHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFL 208
L G I ++++ ++ DK+N+G I ++E+ +F+
Sbjct: 118 KIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
+SK + E+ + LF FD N GY+D +++ L + +L+ D N DGR
Sbjct: 88 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 147
Query: 132 VEYQEFRRYM 141
++Y EF +M
Sbjct: 148 IDYDEFLEFM 157
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 118 RDLLNVCDSNQDGRVEYQEF-----RRYMDDK----ELELYRIFQAIDVEHNGGILPEEL 168
+++++ D + G V++ EF R DD E EL +F+ D +G I EEL
Sbjct: 58 QEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEEL 117
Query: 169 YHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFL 208
L G I ++++ ++ DK+N+G I ++E+ +F+
Sbjct: 118 KIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
D E EL F+ D + NG I EL H + G ++ DEE+ + D D +G I +E
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 203 EW 204
E+
Sbjct: 61 EF 62
Score = 33.1 bits (74), Expect = 0.24, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ ++ F FD + +G++ A++ +++L + +++ D + DG++ Y+
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 136 EFRRYM 141
EF + M
Sbjct: 61 EFVKVM 66
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
+SK + E+ + LF FD N GY+D +++ L + +L+ D N DGR
Sbjct: 88 DSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 147
Query: 132 VEYQEFRRYM 141
++Y EF +M
Sbjct: 148 IDYDEFLEFM 157
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 69 ALGESKEEREQRIRALFNFFDVN-NSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSN 127
A+ + EE++ +A F+ F + G + ++ + L + +++++ D +
Sbjct: 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED 67
Query: 128 QDGRVEYQEF-----RRYMDDK----ELELYRIFQAIDVEHNGGILPEELYHALVKAGIE 178
G V++ EF R DD E EL +F+ D +G I EEL L G
Sbjct: 68 GSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGET 127
Query: 179 IDDEELATFVERVDKDNNGVITFEEWRDFL 208
I ++++ ++ DK+N+G I ++E+ +F+
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 39/70 (55%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE++Q IR F+ FD + SG +D +++ + +L + + + +++ D + G +++
Sbjct: 26 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 85
Query: 135 QEFRRYMDDK 144
+EF M K
Sbjct: 86 EEFLTMMTAK 95
Score = 41.6 bits (96), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 117 ARDLLNVCDSNQDGRVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAG 176
A+ +++ + GRV E +++ E+ F D + +G I +EL A+ G
Sbjct: 7 AKTVVSARRDQKKGRVGLTE------EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALG 60
Query: 177 IEIDDEELATFVERVDKDNNGVITFEEW 204
E EE+ + +DKD +G I FEE+
Sbjct: 61 FEPKKEEIKKMISEIDKDGSGTIDFEEF 88
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Query: 117 ARDLLNVCDSNQDGRVEYQEFRRYMDDK-----ELELYRIFQAIDVEHNGGILPEEL--Y 169
A L D+N DG V Y+E + ++ K E L IF+AID++ NG I E +
Sbjct: 2 AEALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKF 61
Query: 170 HALVKAGIEIDDEE--LATFVERVDKDNNGVITFEEWRDFLLLYPHEATMENI 220
A VK ++ DE+ L + +D D +G +T EE F + +E ++ I
Sbjct: 62 AAAVKEQ-DLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQI 113
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 82 RALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRY- 140
ALF D N G + Y +++A +SS + + + D + +G ++ EF ++
Sbjct: 3 EALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFA 62
Query: 141 -------MDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDK 193
+ D+++ L +++ +D + +G + EE+ K G E++ + + D
Sbjct: 63 AAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGY----EKVVDQIMKADA 118
Query: 194 DNNGVITFEEWRDFLL 209
+ +G IT EE+ F L
Sbjct: 119 NGDGYITLEEFLAFNL 134
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 42.7 bits (99), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 74 KEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVE 133
K + E+ + LF FD N GY+D +++ L + +L+ D N DGR++
Sbjct: 2 KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 61
Query: 134 YQEFRRYMDDKE 145
Y EF +M E
Sbjct: 62 YDEFLEFMKGVE 73
Score = 35.0 bits (79), Expect = 0.075, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 145 ELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E EL +F+ D +G I EEL L G I ++++ ++ DK+N+G I ++E+
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 65
Query: 205 RDFL 208
+F+
Sbjct: 66 LEFM 69
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 42.4 bits (98), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 38/70 (54%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE++Q I+ F+ FD N +G +DY +++ + +L + +L+N D +G + +
Sbjct: 3 EEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGF 62
Query: 135 QEFRRYMDDK 144
+F M +K
Sbjct: 63 DDFLDIMTEK 72
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 42.0 bits (97), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 70 LGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQD 129
+G+S+EE + LF FD N GY+D +++ L + +L+ D N D
Sbjct: 1 MGKSEEE----LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNND 56
Query: 130 GRVEYQEFRRYMDDKE 145
GR++Y EF +M E
Sbjct: 57 GRIDYDEFLEFMKGVE 72
Score = 34.7 bits (78), Expect = 0.079, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 141 MDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVIT 200
M E EL +F+ D +G I +EL L G I ++++ ++ DK+N+G I
Sbjct: 1 MGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 60
Query: 201 FEEWRDFL 208
++E+ +F+
Sbjct: 61 YDEFLEFM 68
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 42.0 bits (97), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
D E E+ F+ D + NG I EL H + G ++ DEE+ + D D +G + +E
Sbjct: 5 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 203 EW 204
E+
Sbjct: 65 EF 66
Score = 37.4 bits (85), Expect = 0.012, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 5 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 136 EFRRYMDDK 144
EF + M K
Sbjct: 65 EFVQMMTAK 73
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 41.6 bits (96), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
D E E+ F+ D + NG I EL H + G ++ DEE+ + D D +G + +E
Sbjct: 6 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Query: 203 EW 204
E+
Sbjct: 66 EF 67
Score = 37.4 bits (85), Expect = 0.012, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 6 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Query: 136 EFRRYMDDK 144
EF + M K
Sbjct: 66 EFVQMMTAK 74
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 41.6 bits (96), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
D E E+ F+ D + NG I EL H + G ++ DEE+ + D D +G + +E
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 203 EW 204
E+
Sbjct: 62 EF 63
Score = 36.6 bits (83), Expect = 0.020, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 136 EFRRYM 141
EF + M
Sbjct: 62 EFVQMM 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 41.6 bits (96), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
D E E+ F+ D + NG I EL H + G ++ DEE+ + D D +G + +E
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 203 EW 204
E+
Sbjct: 63 EF 64
Score = 37.4 bits (85), Expect = 0.013, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 136 EFRRYMDDK 144
EF + M K
Sbjct: 63 EFVQMMTAK 71
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
+SK + E+ + LF +D N GY+D +++ L + +L+ D N DGR
Sbjct: 88 DSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGR 147
Query: 132 VEYQEFRRYM 141
++Y EF +M
Sbjct: 148 IDYDEFLEFM 157
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 75 EEREQRIRALFNFFDVN-NSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVE 133
EE++ +A F+ F + G + ++ + L + +++++ D + G V+
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 134 YQEF-----RRYMDDK----ELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEEL 184
+ EF R DD E EL +F+ D +G I +EL L G I ++++
Sbjct: 74 FDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDI 133
Query: 185 ATFVERVDKDNNGVITFEEWRDFL 208
++ DK+N+G I ++E+ +F+
Sbjct: 134 EELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
+SK + E+ + LF FD N GY+D +++ L + +L+ D N DGR
Sbjct: 88 DSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGR 147
Query: 132 VEYQEFRRYM 141
++Y E+ +M
Sbjct: 148 IDYDEWLEFM 157
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 75 EEREQRIRALFNFFDVN-NSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVE 133
EE++ +A F+ F + G + ++ + L + +++++ D + G V+
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 134 YQEF-----RRYMDDK----ELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEEL 184
+ EF R DD E EL +F+ D +G I +EL L G I ++++
Sbjct: 74 FDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDI 133
Query: 185 ATFVERVDKDNNGVITFEEWRDFL 208
++ DK+N+G I ++EW +F+
Sbjct: 134 EELMKDGDKNNDGRIDYDEWLEFM 157
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 41.6 bits (96), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 78 EQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF 137
E+ + LF FD N GY+D +++ L + +L+ D N DGR++Y EF
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 63
Query: 138 RRYMDDKE 145
+M E
Sbjct: 64 LEFMKGVE 71
Score = 34.7 bits (78), Expect = 0.079, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 145 ELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E EL +F+ D +G I EEL L G I ++++ ++ DK+N+G I ++E+
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 63
Query: 205 RDFL 208
+F+
Sbjct: 64 LEFM 67
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 41.6 bits (96), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
D E EL F+ D + NG I EL H + G ++ D+E+ + D D +G I +E
Sbjct: 5 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYE 64
Query: 203 EW 204
E+
Sbjct: 65 EF 66
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 74 KEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVE 133
+++ E+ + F FD + +G + A++ +++L +++ D + DG +
Sbjct: 3 EQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN 62
Query: 134 YQEFRRYMDDK 144
Y+EF R M K
Sbjct: 63 YEEFVRMMVSK 73
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 5/138 (3%)
Query: 80 RIRALFNFFDVNNSGYLDYAKIEAGLSSLN---IPSEYKYARDLLNVCDSN-QDGRVEYQ 135
+I+ F FD +N G + ++ + L SL +E + LN + + + Y+
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYR 65
Query: 136 EFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDN 195
+ + ++ E+ F+A+D E NG I EL L+ G + E+ ++ V
Sbjct: 66 KPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSG 125
Query: 196 NGVITFEEWRDFLLL-YP 212
+G I +E + D L+ YP
Sbjct: 126 DGAINYESFVDMLVTGYP 143
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
+SK + E+ + LF D N GY+D +++ L + +L+ D N DGR
Sbjct: 88 DSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGR 147
Query: 132 VEYQEFRRYM 141
++Y EF +M
Sbjct: 148 IDYDEFLEFM 157
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 118 RDLLNVCDSNQDGRVEYQEF-----RRYMDDK----ELELYRIFQAIDVEHNGGILPEEL 168
+++++ D + G V++ EF R DD E EL +F+ D +G I +EL
Sbjct: 58 QEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDEL 117
Query: 169 YHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFL 208
L G I ++++ ++ DK+N+G I ++E+ +F+
Sbjct: 118 KIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
+SK + E+ + LF FD N GY+D +++ L + +L+ D N DGR
Sbjct: 88 DSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGR 147
Query: 132 VEYQEFRRYM 141
++Y E +M
Sbjct: 148 IDYDEXLEFM 157
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 118 RDLLNVCDSNQDGRVEYQEF-----RRYMDDK----ELELYRIFQAIDVEHNGGILPEEL 168
+++++ D + G V++ EF R DD E EL +F+ D +G I +EL
Sbjct: 58 QEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDEL 117
Query: 169 YHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFL 208
L G I ++++ ++ DK+N+G I ++E +F+
Sbjct: 118 KIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXLEFM 157
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE +A F+ FD + G + ++ + L + ++ D + G +++
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 135 QEF-----RRYMDD----KELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELA 185
+EF R+ +D E EL F+ D +G I EEL L G + +E++
Sbjct: 76 EEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIE 135
Query: 186 TFVERVDKDNNGVITFEEW 204
++ DK+N+G I F+E+
Sbjct: 136 DLMKDSDKNNDGRIDFDEF 154
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
++K + E+ + F FD N G++D ++ L + + DL+ D N DGR
Sbjct: 89 DAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGR 148
Query: 132 VEYQEFRRYMD 142
+++ EF + M+
Sbjct: 149 IDFDEFLKMME 159
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRD 206
E F D + G I +EL + G EEL +E VD+D +G I FEE
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEE--- 77
Query: 207 FLLLY----------PHEATMENIYHYLERVC--LVDIGEQAAIPEGISKHV 246
FL++ E + N + ++ +DI E I +HV
Sbjct: 78 FLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHV 129
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
D E E+ F+ D + NG I EL H + G ++ DEE+ + D D +G + +E
Sbjct: 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 85
Query: 203 EW 204
E+
Sbjct: 86 EF 87
Score = 33.9 bits (76), Expect = 0.17, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F D + +GY+ A++ +++L + +++ D + DG+V Y+
Sbjct: 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 85
Query: 136 EFRRYMDDK 144
EF + M K
Sbjct: 86 EFVQMMTAK 94
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 82 RALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF---- 137
+A F+ FD + G + ++ + L + ++ D + G ++++EF
Sbjct: 20 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
Query: 138 -RRYMDD----KELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVD 192
R+ +D E EL F+ D +G I EEL L G + +E++ ++ D
Sbjct: 80 VRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD 139
Query: 193 KDNNGVITFEEW 204
K+N+G I F+E+
Sbjct: 140 KNNDGRIDFDEF 151
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
++K + E+ + F FD N G++D ++ L + + DL+ D N DGR
Sbjct: 86 DAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGR 145
Query: 132 VEYQEFRRYMD 142
+++ EF + M+
Sbjct: 146 IDFDEFLKMME 156
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRD 206
E F D + G I +EL + G EEL +E VD+D +G I FEE
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEE--- 74
Query: 207 FLLLY----------PHEATMENIYHYLERVC--LVDIGEQAAIPEGISKHV 246
FL++ E + N + ++ +DI E I +HV
Sbjct: 75 FLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHV 126
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 40.0 bits (92), Expect = 0.002, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 38/73 (52%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
E EE++Q IR F+ FD + +G +D +++ + +L + + + +++ D G+
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGK 83
Query: 132 VEYQEFRRYMDDK 144
+ + +F M K
Sbjct: 84 MNFGDFLTVMTQK 96
Score = 32.7 bits (73), Expect = 0.29, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 122 NVCDSNQDGRVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDD 181
N+ S+Q R+ + ++++ E+ F D + G I +EL A+ G E
Sbjct: 9 NMASSSQRKRMSPKP--ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKK 66
Query: 182 EELATFVERVDKDNNGVITFEEWRDFL 208
EE+ + +DK+ G + F DFL
Sbjct: 67 EEIKKMISEIDKEGTGKMNFG---DFL 90
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 82 RALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF---- 137
+A F+ FD + G + ++ + L + ++ D + G ++++EF
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 138 -RRYMDD----KELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVD 192
R+ +D E EL F+ D +G I EEL L G + +E++ ++ D
Sbjct: 83 VRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD 142
Query: 193 KDNNGVITFEEW 204
K+N+G I F+E+
Sbjct: 143 KNNDGRIDFDEF 154
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
++K + E+ + F FD N G++D ++ L + + DL+ D N DGR
Sbjct: 89 DAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGR 148
Query: 132 VEYQEFRRYM 141
+++ EF + M
Sbjct: 149 IDFDEFLKMM 158
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E F D + G I +EL + G EEL +E VD+D +G I FEE+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 82 RALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF---- 137
+A F+ FD + G + ++ + L + ++ D + G ++++EF
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 138 -RRYMDD----KELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVD 192
R+ +D E EL F+ D +G I EEL L G + +E++ ++ D
Sbjct: 83 VRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD 142
Query: 193 KDNNGVITFEEW 204
K+N+G I F+E+
Sbjct: 143 KNNDGRIDFDEF 154
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
++K + E+ + F FD N G++D ++ L + + DL+ D N DGR
Sbjct: 89 DAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGR 148
Query: 132 VEYQEFRRYM 141
+++ EF + M
Sbjct: 149 IDFDEFLKMM 158
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRD 206
E F D + G I +EL + G EEL +E VD+D +G I FEE
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEE--- 77
Query: 207 FLLLY----------PHEATMENIYHYLERVC--LVDIGEQAAIPEGISKHV 246
FL++ E +E+ + ++ +DI E I +HV
Sbjct: 78 FLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHV 129
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
D E E+ F+ D + NG I +L H + G ++ DEE+ + D D +G + +E
Sbjct: 4 DSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Query: 203 EW 204
++
Sbjct: 64 DF 65
Score = 35.8 bits (81), Expect = 0.041, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQ 135
+ E+ IR F FD + +GY+ A + +++L + +++ D + DG+V Y+
Sbjct: 4 DSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Query: 136 EFRRYMDDK 144
+F + M K
Sbjct: 64 DFVQMMTAK 72
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE +A F+ FD + G + ++ + L + ++ D + G +++
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 135 QEF-----RRYMDD----KELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELA 185
+EF R+ +D E EL F+ D +G I EEL L G + +E++
Sbjct: 76 EEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIE 135
Query: 186 TFVERVDKDNNGVITFEEW 204
++ DK+N+G I F+E+
Sbjct: 136 DLMKDSDKNNDGRIDFDEF 154
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
++K + E+ + F FD N G++D ++ L + + DL+ D N DGR
Sbjct: 89 DAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGR 148
Query: 132 VEYQEFRRYMD 142
+++ EF + M+
Sbjct: 149 IDFDEFLKMME 159
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRD 206
E F D + G I +EL + G EEL +E VD+D +G I FEE
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEE--- 77
Query: 207 FLLLY----------PHEATMENIYHYLERVC--LVDIGEQAAIPEGISKHV 246
FL++ E + N + ++ +DI E I +HV
Sbjct: 78 FLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHV 129
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 28/137 (20%)
Query: 93 SGYLDYA---KIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF--------RRYM 141
SG LD A KI P+ K+A + NV D N+DGR+E+ EF R +
Sbjct: 40 SGQLDAAGFQKIYKQFFPFGDPT--KFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTL 97
Query: 142 DDKELELYRIFQAIDVEHNGGILPEELY------HALVKAGIEIDDEELA--TFVERV-- 191
D+K L F+ D++++G I E+ + +V +E+ +EE V+R+
Sbjct: 98 DEK---LRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFA 154
Query: 192 --DKDNNGVITFEEWRD 206
DK+ +G +T +E+++
Sbjct: 155 MMDKNADGKLTLQEFQE 171
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2
Determined By Nmr Molecular Fragment Replacement
Length = 303
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 243 SKHVHANRYLIAGGVAGATSRTATAPLDRLKVVLQVQTTRA-------HIMPAIRDIWRD 295
S+H L+AG GA + P D +KV Q Q RA + A + I R+
Sbjct: 99 SEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQ-ARAGGGRRYQSTVEAYKTIARE 157
Query: 296 GGISGFFRGNGLNVLKVAPESAIKFYTYERLKKLIAKVKGM 336
GI G ++G NV + A + + TY+ +K + K M
Sbjct: 158 EGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLM 198
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
D E E+ F+ D + NG I EL H + G ++ DEE+ + D D +G + +E
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 203 EW 204
E+
Sbjct: 62 EF 63
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 78 EQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF 137
E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+EF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 138 RRYM 141
+ M
Sbjct: 64 VQMM 67
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 16/143 (11%)
Query: 81 IRALFNFF---DVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF 137
I+ L FF D + S LD + GL+ L + + A + D N G ++ +EF
Sbjct: 36 IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
Query: 138 RRYM-----DDKELELYRIFQAIDVEHNGGILPEEL-------YHALVKAGIEIDDEELA 185
R + +E + F +D +G + ++L H V++G +DE L
Sbjct: 96 LRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLR 155
Query: 186 TFVERVD-KDNNGVITFEEWRDF 207
F++ D + +G +T E++D+
Sbjct: 156 RFLDNFDSSEKDGQVTLAEFQDY 178
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 45 DTAKQWDNPVKKAGTS--------VTMEHVLLALGESKE-EREQRIRALFNFFDVNNSGY 95
DT D K G V E + A+ K+ E + R LF FD N +G
Sbjct: 8 DTTNSKDGAASKGGKDGKTTADRKVAWERIRCAIPRDKDAESKSRRIELFKQFDTNGTGK 67
Query: 96 LDYAKIEAGLSSL--------NIPS----EYKYARDLLN-VCDSNQDGRVEYQEFRRYMD 142
L + ++ G + ++P + A+DL N V ++ VE+ EFR +
Sbjct: 68 LGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLML- 126
Query: 143 DKELELYRIFQAI----DVEHNGGILPE--ELYHALVKA---GIEIDDEELATFVERVDK 193
+Y IF+ ++ +G +L E E AL K G++I D T +D
Sbjct: 127 ---CYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITD--ATTVFNEIDT 181
Query: 194 DNNGVITFEEW 204
+ +GV+TF+E+
Sbjct: 182 NGSGVVTFDEF 192
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 38.1 bits (87), Expect = 0.007, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRD 206
E RIF+ D +G I EL AL G I +E+ + +D D +G I+F+E+ D
Sbjct: 10 ERERIFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEFTD 68
Query: 207 F 207
F
Sbjct: 69 F 69
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 38.1 bits (87), Expect = 0.008, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
++K + E+ + F FD N G++D ++ L + + DL+ D N DGR
Sbjct: 3 DAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGR 62
Query: 132 VEYQEFRRYMD 142
+++ EF + M+
Sbjct: 63 IDFDEFLKMME 73
Score = 33.5 bits (75), Expect = 0.17, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 145 ELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E EL F+ D +G I EEL L G + +E++ ++ DK+N+G I F+E+
Sbjct: 9 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 68
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 37.7 bits (86), Expect = 0.011, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 117 ARDLLNVCDSNQ-------DGRVEYQEFRRYMDDKEL---ELYRIFQAIDVEHNGGILPE 166
A+DLL D + +G +++F + K + ++ ++F+AID + +G I E
Sbjct: 3 AKDLLKADDIKKALDAVKAEGSFNHKKFFALVGLKAMSANDVKKVFKAIDADASGFIEEE 62
Query: 167 ELYHAL---VKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFLLLYPHEA 215
EL L G ++ D E F++ DKD +G I +E+ + HEA
Sbjct: 63 ELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLV----HEA 110
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 37.7 bits (86), Expect = 0.011, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 150 RIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDF 207
RIF+ D +G I EL AL G + +E+ + +D D +G I+F+E+ DF
Sbjct: 15 RIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDF 71
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAG-LSSLNIPSEYKYARDLLNVC------ 124
E E +QR LF FD N +G L Y ++ +G L L + RD+
Sbjct: 41 EKTAEAKQRRIELFKKFDKNETGKLXYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRT 100
Query: 125 ------DSNQDGRVEYQEFR---RYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKA 175
+ + VE+ EFR Y+ D EL +F ID N + EE A+ K
Sbjct: 101 LGSKLENKGSEDFVEFLEFRLMLCYIYDF-FELTVMFDEIDASGNMLVDEEEFKRAVPKL 159
Query: 176 ---GIEIDDEELATFVERVDKDNNGVITFEEW 204
G +++D A + +DK+ G +TF+E+
Sbjct: 160 EAWGAKVEDP--AALFKELDKNGTGSVTFDEF 189
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 145 ELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E E+ F+ D + NG I EL H + G ++ DEE+ + D D +G + +EE+
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 78 EQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF 137
E+ IR F FD + +GY+ A++ +++L + +++ D + DG+V Y+EF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 138 RRYM 141
+ M
Sbjct: 61 VQMM 64
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 6/114 (5%)
Query: 81 IRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRY 140
+ F FD +G++ ++ L + E ++ N D+ +G++++ EF
Sbjct: 8 FKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSM 67
Query: 141 MDDK------ELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV 188
M + E L + F+ D E G I L AL+ G + E A F+
Sbjct: 68 MGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL 121
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 36.6 bits (83), Expect = 0.020, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE ++ LF D +NSG + + +++ GL + +DL++ D ++ G ++Y
Sbjct: 19 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78
Query: 135 QEF 137
EF
Sbjct: 79 GEF 81
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 138 RRYMDDKELELYRI---FQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKD 194
+R +D E EL I F+ D + NG I +EL A+ G ++ EL ++R+D D
Sbjct: 25 QRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMD 84
Query: 195 NNGVITFEEWRDFL 208
+G + FEE+ L
Sbjct: 85 GDGQVDFEEFVTLL 98
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLN-IPSEYKYARDLLNVCDSNQDGRVE 133
E+ + IR F FD + +G++ ++ + SL +P+E + ++ D + DG+V+
Sbjct: 32 EDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEV-IIQRLDMDGDGQVD 90
Query: 134 YQEF 137
++EF
Sbjct: 91 FEEF 94
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 36.6 bits (83), Expect = 0.024, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 142 DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITF 201
D E EL F+ +D E G I + L L G E+ ++E+ + D D +G + +
Sbjct: 3 DLDERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDY 62
Query: 202 EEWRDFLL 209
EE++ ++
Sbjct: 63 EEFKCLMM 70
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 36.2 bits (82), Expect = 0.027, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 136 EFRRYMDDKEL-ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKD 194
E R ++ ++ + E F D + G I +EL + G EEL +E VD+D
Sbjct: 9 EARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED 68
Query: 195 NNGVITFEEW 204
+G I FEE+
Sbjct: 69 GSGTIDFEEF 78
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 10/132 (7%)
Query: 83 ALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFR---- 138
A +F SG + +I L L I R L++ D +G +++ F+
Sbjct: 18 AFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGA 77
Query: 139 RYMDDK------ELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVD 192
R++ ++ + EL F+ D E NG I + + L + + E+L ++ +D
Sbjct: 78 RFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEID 137
Query: 193 KDNNGVITFEEW 204
D +G + FEE+
Sbjct: 138 ADGSGTVDFEEF 149
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 78 EQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF 137
E+R+R FN FD + SG + ++ A L L SE K D+L D N+D +++ EF
Sbjct: 434 EERLRRAFNLFDTDKSGKITKEEL-ANLFGLTSISE-KTWNDVLGEADQNKDNMIDFDEF 491
Query: 138 RRYM 141
M
Sbjct: 492 VSMM 495
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 13/144 (9%)
Query: 73 SKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRV 132
+K +++ AL N S L A I S L E K D+ D N DG++
Sbjct: 313 NKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQL 372
Query: 133 EYQEF-------RRY------MDDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEI 179
+ +E R + + + E E+ I + +D + NG I E + I
Sbjct: 373 DKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILF 432
Query: 180 DDEELATFVERVDKDNNGVITFEE 203
+E L D D +G IT EE
Sbjct: 433 SEERLRRAFNLFDTDKSGKITKEE 456
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 81 IRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRY 140
++ F FD + G++ ++ ++ L P + ++ D +QDGRV Y+EF R
Sbjct: 8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARM 67
Query: 141 M 141
+
Sbjct: 68 L 68
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
+L F+A D + +G I +EL A+ G + EEL + D D +G + +EE+
Sbjct: 7 DLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 35.4 bits (80), Expect = 0.046, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E F D + G I +EL + G EEL +E VD+D +G I FEE+
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 67
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 35.4 bits (80), Expect = 0.050, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
D ++ L +++ +DV+ +G + EE+ K GI E++A V + D + +G IT E
Sbjct: 2 DDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLE 57
Query: 203 EWRDFLL 209
E+ +F L
Sbjct: 58 EFLEFSL 64
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 117 ARDLLNVCDSNQDGRVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAG 176
R ++ V DS+ G++ ++EF +Y+ + + I++ DV+ +G I EL A AG
Sbjct: 49 CRSMVAVMDSDTTGKLGFEEF-KYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAG 107
Query: 177 IEIDDEELATFVERVDKDNNGVITFEEW 204
+ +E L + + R D G + F+ +
Sbjct: 108 FHL-NEHLYSMIIRRYSDEGGNMDFDNF 134
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 35.0 bits (79), Expect = 0.059, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 33/67 (49%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F FD +N+G + +++ + SL + DL+N D + + ++E+
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 135 QEFRRYM 141
EF M
Sbjct: 66 SEFLALM 72
Score = 30.4 bits (67), Expect = 1.7, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E F D ++NG I EL + G+ + E+ + +D D N I F E+
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 146 LELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWR 205
LE +R+F D E NG ++ EL H L G ++ +EE+ T + +D+NG I +E +
Sbjct: 90 LEGFRVF---DKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGCINYEAFL 145
Query: 206 DFLL 209
+L
Sbjct: 146 KHIL 149
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 104 GLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRYMD-------DKELELYRIFQAID 156
GL +L+ PS KY + D N+DG +++ E+ + D++L Y F+ D
Sbjct: 42 GLKNLS-PSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWY--FKLYD 98
Query: 157 VEHNGGILPEELYH------ALVKAGIEIDDEELATFV-ERVDKDNNGVITFEEW 204
V+ NG I EL + A+ + + EE V +++D + +G ++ EE+
Sbjct: 99 VDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEF 153
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 63 MEHVLLALGESKEEREQRIRALFNFFDVNNSGYLDYAK---IEAGLSSLNIPSEYKYARD 119
ME+V K + +Q++R F +DV+ +G +D + I + ++N +E A +
Sbjct: 72 MEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEE 131
Query: 120 LLNVC----DSNQDGRVEYQEFRRYMDDKELELYRIFQAIDVEH 159
N+ D N DG + +EF + E+ L + +++D+ H
Sbjct: 132 FTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTRSLDLTH 175
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 35.0 bits (79), Expect = 0.069, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 118 RDLLNVCDSNQDGRVEYQEFRRYMDD---KELELYRIFQAIDVEHNGGILPEEL 168
R + CD+N+ GR+E +EFR + + + +FQ +D + +G I +E
Sbjct: 30 RSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEF 83
Score = 34.7 bits (78), Expect = 0.094, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 76 EREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNI-PSEYKYARDLLNVCDSNQDGRVEY 134
E R+R++F D N SG L+ + A + L + P++ A + D+++DG + +
Sbjct: 24 EELARLRSVFAACDANRSGRLEREEFRALCTELRVRPAD---AEAVFQRLDADRDGAITF 80
Query: 135 QEFRR 139
QEF R
Sbjct: 81 QEFAR 85
Score = 32.0 bits (71), Expect = 0.50, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 142 DDKELELYR-IFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVIT 200
D +EL R +F A D +G + EE + + D E A F +R+D D +G IT
Sbjct: 22 DGEELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAE-AVF-QRLDADRDGAIT 79
Query: 201 FEEW-RDFL 208
F+E+ R FL
Sbjct: 80 FQEFARGFL 88
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 12/112 (10%)
Query: 104 GLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF----RRYMDDK-ELELYRIFQAIDVE 158
GL LN + K+ + N D+N+DG V++ EF M +K E +L F+ D +
Sbjct: 47 GLQGLNQKAN-KHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDAD 105
Query: 159 HNGGILPEELYHALVKAGI-----EIDDEELATFV-ERVDKDNNGVITFEEW 204
NG I EL + + EE V ++D +N+G +T EE+
Sbjct: 106 GNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEF 157
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 36/154 (23%)
Query: 49 QWD----NPVKKAGTSVTMEHVLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAG 104
+WD +++A +H+ A G K+ ++ L N F G DY EAG
Sbjct: 15 RWDFDGNGALERADFEKEAQHIAEAFG--KDAGAAEVQTLKNAF----GGLFDYLAKEAG 68
Query: 105 LSSLNIPSEYKYAR-----------------------DLLNVCDSNQDGRVEYQEFRRYM 141
+ S +E ++ R ++ +CD N DG++ EF ++
Sbjct: 69 VGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWL 128
Query: 142 DD---KELELYRIFQAIDVEHNGGILPEELYHAL 172
+ E F +D NG + +EL A+
Sbjct: 129 TALGMSKAEAAEAFNQVDTNGNGELSLDELLTAV 162
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 110 IPSEYKYARDLLNVCDSNQDGRVEYQEFRRYMDD---KELELYRIFQAIDVEHNGGILPE 166
I + KY +L D+N +G + ++E + K+ ++ RI QA+D+ G I
Sbjct: 34 INNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWDINRILQALDINDRGNITYT 93
Query: 167 ELYHALVKAGIEIDDEELATFVERVDKDNNGVIT 200
E + I+ L ++DKD +G I+
Sbjct: 94 EFMAGCYRWK-NIESTFLKAAFNKIDKDEDGYIS 126
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 151 IFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
+F +D HNG + E+Y L GI+ D + ++ +D ++ G IT+ E+
Sbjct: 44 LFYKLDTNHNGSLSHREIYTVLASVGIKKWD--INRILQALDINDRGNITYTEF 95
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 116 YARDLLNVCDSNQDGRVEYQEFRRYMD------DKELELYRIFQAIDVEHNGGILPEELY 169
+A + +V D ++G +E+ EF R + ++ F+ D+ G I EEL
Sbjct: 75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELK 134
Query: 170 HALV----KAGIEIDDEELATFVERV----DKDNNGVITFEEWRDFLLLYP 212
+V ++ + + ++ + V++ D+ N+G I +EW+DF+ L P
Sbjct: 135 EMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNP 185
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 35/129 (27%)
Query: 81 IRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRY 140
++ + + FD + +G +D+ + G+S ++
Sbjct: 54 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG---------------------------- 85
Query: 141 MDDKELELYRIFQAIDVEHNGGILPEELYHAL-VKAGIEIDDEELATFVERV----DKDN 195
DKE +L F+ D++ +G I EL+ L + G + D +L V++ DKD
Sbjct: 86 --DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDG 143
Query: 196 NGVITFEEW 204
+G I+FEE+
Sbjct: 144 DGRISFEEF 152
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 74 KEEREQRIRALFNFFDVNNSGYLDYA------KIEAGLSSLNIPSEYKYARDLLNVCDSN 127
K ++EQ++R F +D++ GY+ K+ G + + + + ++N D +
Sbjct: 84 KGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIIN-ADKD 142
Query: 128 QDGRVEYQEF 137
DGR+ ++EF
Sbjct: 143 GDGRISFEEF 152
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 35/129 (27%)
Query: 81 IRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRY 140
++ + + FD + +G +D+ + G+S ++
Sbjct: 55 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG---------------------------- 86
Query: 141 MDDKELELYRIFQAIDVEHNGGILPEELYHAL-VKAGIEIDDEELATFVERV----DKDN 195
DKE +L F+ D++ +G I EL+ L + G + D +L V++ DKD
Sbjct: 87 --DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDG 144
Query: 196 NGVITFEEW 204
+G I+FEE+
Sbjct: 145 DGRISFEEF 153
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 74 KEEREQRIRALFNFFDVNNSGYLDYA------KIEAGLSSLNIPSEYKYARDLLNVCDSN 127
K ++EQ++R F +D++ GY+ K+ G + + + + ++N D +
Sbjct: 85 KGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIIN-ADKD 143
Query: 128 QDGRVEYQEF 137
DGR+ ++EF
Sbjct: 144 GDGRISFEEF 153
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 35/129 (27%)
Query: 81 IRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRY 140
++ + + FD + +G +D+ + G+S ++
Sbjct: 41 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG---------------------------- 72
Query: 141 MDDKELELYRIFQAIDVEHNGGILPEELYHAL-VKAGIEIDDEELATFVERV----DKDN 195
DKE +L F+ D++ +G I EL+ L + G + D +L V++ DKD
Sbjct: 73 --DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDG 130
Query: 196 NGVITFEEW 204
+G I+FEE+
Sbjct: 131 DGRISFEEF 139
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 74 KEEREQRIRALFNFFDVNNSGYLDYA------KIEAGLSSLNIPSEYKYARDLLNVCDSN 127
K ++EQ++R F +D++ GY+ K+ G + + + + ++N D +
Sbjct: 71 KGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIIN-ADKD 129
Query: 128 QDGRVEYQEF 137
DGR+ ++EF
Sbjct: 130 GDGRISFEEF 139
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 35/129 (27%)
Query: 81 IRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRY 140
++ + + FD + +G +D+ + G+S ++
Sbjct: 40 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG---------------------------- 71
Query: 141 MDDKELELYRIFQAIDVEHNGGILPEELYHAL-VKAGIEIDDEELATFVERV----DKDN 195
DKE +L F+ D++ +G I EL+ L + G + D +L V++ DKD
Sbjct: 72 --DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDG 129
Query: 196 NGVITFEEW 204
+G I+FEE+
Sbjct: 130 DGRISFEEF 138
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 74 KEEREQRIRALFNFFDVNNSGYLDYA------KIEAGLSSLNIPSEYKYARDLLNVCDSN 127
K ++EQ++R F +D++ GY+ K+ G + + + + ++N D +
Sbjct: 70 KGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIIN-ADKD 128
Query: 128 QDGRVEYQEF 137
DGR+ ++EF
Sbjct: 129 GDGRISFEEF 138
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 117 ARDLLNVCDSNQDGRVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAG 176
R ++ V DS+ G++ ++EF +Y+ + I++ D + +G I EL A AG
Sbjct: 60 CRSMVAVMDSDTTGKLGFEEF-KYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAG 118
Query: 177 IEIDDEELATFVERVDKDNNGVITFEEW 204
+ +E L + R D +G + F+ +
Sbjct: 119 FHL-NEHLYNMIIRRYSDESGNMDFDNF 145
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 146 LELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWR 205
+E R+F D E NG ++ E+ H LV G ++ +EE+ V +D+NG I +EE
Sbjct: 87 VEGLRVF---DKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAG-HEDSNGCINYEELV 142
Query: 206 DFLL 209
+L
Sbjct: 143 RMVL 146
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 136 EFRRYMDDKEL-ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKD 194
E R ++ ++ + E F D + G I + L + G EEL +E VD+D
Sbjct: 9 EARAFLSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDED 68
Query: 195 NNGVITFEEW 204
+G I FEE+
Sbjct: 69 GSGTIDFEEF 78
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 146 LELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWR 205
+E R+F D E NG ++ E+ H LV G ++ +EE+ V +D+NG I +EE
Sbjct: 89 VEGLRVF---DKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAG-HEDSNGCINYEELV 144
Query: 206 DFLL 209
+L
Sbjct: 145 RMVL 148
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 116 YARDLLNVCDSNQDGRVEYQEFRRYMD------DKELELYRIFQAIDVEHNGGILPEELY 169
+A + +V D ++G +E+ EF R + ++ F+ D+ G I EEL
Sbjct: 75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELK 134
Query: 170 HALV----KAGIEIDDEELATFVERV----DKDNNGVITFEEWRDFLLLYP 212
+V ++ + + ++ + V++ D+ N+G I +EW+DF+ L P
Sbjct: 135 EMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNP 185
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 33.9 bits (76), Expect = 0.15, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 142 DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITF 201
D++ E F D + +G I +EL + G + EL + VD D NG I F
Sbjct: 6 DEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 202 EEWRDFL 208
E+ + +
Sbjct: 66 PEFLNLM 72
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 33.9 bits (76), Expect = 0.15, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
EL F+ D E NG I + + L + + E+L ++ +D D +G + FEE+
Sbjct: 4 ELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 33.5 bits (75), Expect = 0.18, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E F D + +G I +EL + G+ + EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIE-IDDEELATFVERVDKDNNGVITF 201
D E E+ R F+ D +G I +E + K G E + D E+ ++ D+D NGVI
Sbjct: 5 DDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDI 64
Query: 202 EEWRDFL 208
E+ D +
Sbjct: 65 PEFMDLI 71
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 116 YARDLLNVCDSNQDGRVEYQEFRRYMD-----DKELELYRIFQAIDVEHNGGILPEEL-- 168
YA L N D++ +G V +++F + + + +L F D+ +G I EE+
Sbjct: 103 YAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLD 162
Query: 169 -----YHALVKAGIEIDDEE-----LATFVERVDKDNNGVITFEEW 204
Y + K + E+ + TF +++DK+ +GV+T +E+
Sbjct: 163 IMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 191 VDKDNNGVITFEEWRDFLLLYPHEATMENIYHYLERVCLVDIGEQAAIPEGISKHV 246
VDKD NG IT +EW+ + + E+ RVC +D Q + E +H+
Sbjct: 118 VDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETF-RVCDIDESGQLDVDEXTRQHL 172
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 97 DYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRYMDDK-----ELELYRI 151
D+ KI P ++ A L V D + +G + ++EF + E +L
Sbjct: 47 DFVKIYKQFFPFGSPEDF--ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWA 104
Query: 152 FQAIDVEHNGGILPEELY------HALVKAGIEIDDEE------LATFVERVDKDNNGVI 199
F+ D+ H+G I +E+ + ++ + + ++++E + + +DK+ +G I
Sbjct: 105 FELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYI 164
Query: 200 TFEEWRD 206
T +E+R+
Sbjct: 165 TLDEFRE 171
Score = 27.7 bits (60), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 12/87 (13%)
Query: 64 EHVLLALGESKEEREQRIRALFNFFDVNNSGYLDYA----------KIEAGLSSLNIPSE 113
E + + S+ E+++ F +D+N+ GY+ + K+ + +LN
Sbjct: 84 EFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEA 143
Query: 114 YKYAR--DLLNVCDSNQDGRVEYQEFR 138
R + + D N+DG + EFR
Sbjct: 144 TPEMRVKKIFKLMDKNEDGYITLDEFR 170
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 32.7 bits (73), Expect = 0.32, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 142 DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITF 201
+++ ++ F D + +G I EEL + +EEL + VD D NG I F
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 202 EEW 204
+E+
Sbjct: 66 DEF 68
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F FD + G + ++ + SL+ + +D+++ D++ +G +E+
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 135 QEFRRYMDDK 144
EF M K
Sbjct: 66 DEFLSLMAKK 75
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 32.7 bits (73), Expect = 0.32, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
D + E+ + F+ D + G I + L + G + DEEL ++ D+D +G ++ +
Sbjct: 18 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQ 77
Query: 203 EW 204
E+
Sbjct: 78 EF 79
Score = 31.2 bits (69), Expect = 0.95, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 73 SKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRV 132
S+++ ++ I F FD + +G + + ++ L + +++++ D + DG V
Sbjct: 15 SEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 74
Query: 133 EYQEFRRYMDDKELELY 149
QEF R M K+ LY
Sbjct: 75 SEQEFLRIM--KKTSLY 89
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 32.7 bits (73), Expect = 0.33, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 142 DDKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITF 201
+++ ++ F D + +G I EEL + +EEL + VD D NG I F
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 202 EEW 204
+E+
Sbjct: 66 DEF 68
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F FD + G + ++ + SL+ + +D+++ D++ +G +E+
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 135 QEFRRYMDDK 144
EF M K
Sbjct: 66 DEFLSLMAKK 75
>pdb|1U79|A Chain A, Crystal Structure Of Atfkbp13
pdb|1U79|B Chain B, Crystal Structure Of Atfkbp13
pdb|1U79|C Chain C, Crystal Structure Of Atfkbp13
pdb|1U79|D Chain D, Crystal Structure Of Atfkbp13
pdb|1U79|E Chain E, Crystal Structure Of Atfkbp13
pdb|1Y0O|A Chain A, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|B Chain B, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|C Chain C, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|D Chain D, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|E Chain E, Crystal Structure Of Reduced Atfkbp13
Length = 129
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 25 QIFDSKHARGVPLFFRFINGDTAKQWDNPV 54
++FDS + RG PL FR G+ K WD +
Sbjct: 45 KVFDSSYNRGKPLTFRIGVGEVIKGWDQGI 74
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 32.7 bits (73), Expect = 0.36, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
D + E+ + F+ D + G I + L + G + DEEL ++ D+D +G ++ +
Sbjct: 8 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQ 67
Query: 203 EW 204
E+
Sbjct: 68 EF 69
Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 35/74 (47%)
Query: 73 SKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRV 132
S+++ ++ I F FD + +G + + ++ L + +++++ D + DG V
Sbjct: 5 SEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 64
Query: 133 EYQEFRRYMDDKEL 146
QEF R M L
Sbjct: 65 SEQEFLRIMKKTSL 78
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 19/121 (15%)
Query: 84 LFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRYMDD 143
LFN FD + +G + + GLS L + ++ + N+ D N+DG + +E
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEM------ 187
Query: 144 KELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEE 203
L + + + H IL E+ A + E + F +++D++ +GV+T +E
Sbjct: 188 --LAIMKSIYDMMGRHTYPILRED-------APL----EHVERFFQKMDRNQDGVVTIDE 234
Query: 204 W 204
+
Sbjct: 235 F 235
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 32.3 bits (72), Expect = 0.40, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRD 206
++ RIF+ D +G I EL AL G +E+ + +D D +G I F E+
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 62
Query: 207 F 207
F
Sbjct: 63 F 63
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 32.3 bits (72), Expect = 0.40, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRD 206
++ RIF+ D +G I EL AL G +E+ + +D D +G I F E+
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 61
Query: 207 F 207
F
Sbjct: 62 F 62
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 32.3 bits (72), Expect = 0.40, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 71 GESKEEREQRIRALFNFFDVNNSGYLD-------YAKIEAGLSSLNIPSEYKYARDLLNV 123
G SK Q ++ +F F D + SGYLD K E+G L SE K L+
Sbjct: 35 GLSKMSANQ-VKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELT-ESETK---SLMAA 89
Query: 124 CDSNQDGRVEYQEFR 138
D++ DG++ +EF+
Sbjct: 90 ADNDGDGKIGAEEFQ 104
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 191 VDKDNNGVITFEEWRDFLLLYPHEATMENIYHYLERVCLVDIGEQAAIPEGISKHV 246
VDKD NG IT +EW+ + + E+ RVC +D Q + E +H+
Sbjct: 118 VDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETF-RVCDIDESGQLDVDEMTRQHL 172
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 32.3 bits (72), Expect = 0.41, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ DG +++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 65
Query: 135 QEFRRYMDDK 144
EF M K
Sbjct: 66 PEFLTMMARK 75
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
D+ +Y+ F +D + +G + EL GI + + + D D NG I+F
Sbjct: 48 DQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFY 107
Query: 203 EWRDFLLLYPHEATMENIY 221
E F+ +Y N++
Sbjct: 108 E---FMAMYKFMELAYNLF 123
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 32.3 bits (72), Expect = 0.43, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 160 NGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
+G I +EL + G EEL ++ VD+D +G + F+EW
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 32.3 bits (72), Expect = 0.43, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 160 NGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
+G I +EL + G EEL ++ VD+D +G + F+EW
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 79 QRIRALFNFFDVNNSGYLDYAKI-EAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF 137
+ +R F FD N G + +++ EA + L ++ +++ D N DGRV+++EF
Sbjct: 88 KELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 147
Query: 138 RRYM 141
R M
Sbjct: 148 VRMM 151
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 32.3 bits (72), Expect = 0.44, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E F D + +G I +EL + G + EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 30.4 bits (67), Expect = 1.4, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 135 QEFRRYMDDK 144
EF M K
Sbjct: 66 PEFLTMMARK 75
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 32.3 bits (72), Expect = 0.45, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E F D + +G I +EL + G + EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 135 QEFRRYMDDK 144
EF M K
Sbjct: 66 PEFLTMMARK 75
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
D+ +Y+ F +D + +G + EL GI + + + D D NG I+F
Sbjct: 48 DQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFY 107
Query: 203 EWRDFLLLYPHEATMENIY 221
E F+ +Y N++
Sbjct: 108 E---FMAMYKFMELAYNLF 123
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 32.3 bits (72), Expect = 0.46, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E F D + +G I +EL + G + EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 135 QEFRRYMDDK 144
EF M K
Sbjct: 66 PEFLTMMARK 75
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 32.3 bits (72), Expect = 0.46, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E F D + +G I +EL + G + EL + VD D NG I F E+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 135 QEFRRYMDDK 144
EF M K
Sbjct: 67 PEFLTMMARK 76
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 32.3 bits (72), Expect = 0.46, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E F D + +G I +EL + G + EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 135 QEFRRYMDDK 144
EF M K
Sbjct: 66 PEFLTMMARK 75
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 32.3 bits (72), Expect = 0.46, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E F D + +G I +EL + G + EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 135 QEFRRYMDDK 144
EF M K
Sbjct: 66 PEFLTMMARK 75
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 32.3 bits (72), Expect = 0.46, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E F D + +G I +EL + G + EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 135 QEFRRYMDDK 144
EF M K
Sbjct: 66 PEFLTMMARK 75
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 32.0 bits (71), Expect = 0.55, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 147 ELYRIFQAIDVEHNGGILPEEL--YHALVKAGIE-IDDEELATFVERVDKDNNGVITFEE 203
++ + F ID + +G I +EL + + KAG + D E F++ D D +G I EE
Sbjct: 43 DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEE 102
Query: 204 W 204
W
Sbjct: 103 W 103
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 32.0 bits (71), Expect = 0.55, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 147 ELYRIFQAIDVEHNGGILPEEL--YHALVKAGIE-IDDEELATFVERVDKDNNGVITFEE 203
++ + F ID + +G I +EL + + KAG + D E F++ D D +G I EE
Sbjct: 42 DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEE 101
Query: 204 W 204
W
Sbjct: 102 W 102
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 32.0 bits (71), Expect = 0.57, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
E F D + +G I +EL + G + EL + VD D NG I F E+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE+ + F+ FD + G + ++ + SL +D++N D++ +G +++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 135 QEF-----RRYMD-DKELELYRIFQ 153
EF R+ D D E E+ F+
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFR 90
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 79 QRIRALFNFFDVNNSGYLDYAKI-EAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF 137
+ +R F FD N G + +++ EA L ++ +++ D N DGRV+++EF
Sbjct: 88 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 147
Query: 138 RRYM 141
R M
Sbjct: 148 VRMM 151
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 83 ALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQE----FR 138
A+ N NS L A + S L E K D+ D N DG+++ QE +
Sbjct: 314 AIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYS 373
Query: 139 RYMDDK---------ELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVE 189
+ ++ E E+ I A D + NG I E + + ++L + +
Sbjct: 374 KLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQ 433
Query: 190 RVDKDNNGVITFEE 203
+ D+D NG I+ +E
Sbjct: 434 KFDQDGNGKISVDE 447
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 64 EHVLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEA--GLSSLNIPSEYKYARDLL 121
E V +A+ + ++ + F FD + +G + ++ + GL L E K ++++
Sbjct: 411 EFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHL----ESKTWKEMI 466
Query: 122 NVCDSNQDGRVEYQEFRRYM 141
+ DSN DG V+++EF + +
Sbjct: 467 SGIDSNNDGDVDFEEFCKMI 486
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 31.6 bits (70), Expect = 0.65, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 79 QRIRALFNFFDVNNSGYLDYAKI-EAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF 137
+ +R F FD N G + +++ EA L ++ +++ D N DGRV+++EF
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 138 RRYM 141
R M
Sbjct: 67 VRMM 70
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 79 QRIRALFNFFDVNNSGYLDYAKI-EAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEF 137
+ +R F FD N G + +++ EA L ++ +++ D N DGRV+++EF
Sbjct: 102 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 161
Query: 138 RRYM 141
R M
Sbjct: 162 VRMM 165
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 117 ARDLLNVCDSNQDGRVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAG 176
+R ++ V DS+ G++ ++EF +Y+ + + I++ D + +G I EL A AG
Sbjct: 60 SRSMVAVMDSDTTGKLGFEEF-KYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAG 118
Query: 177 IEIDDEELATFVERVDKDNNGVITFEEW 204
++ + + R D G + F+ +
Sbjct: 119 FHLNQHIYSMIIRRY-SDETGNMDFDNF 145
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 31.2 bits (69), Expect = 0.86, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 21/76 (27%)
Query: 117 ARDLLNVCDSNQDGRVEYQEFRRYMDDK-----ELELYRIFQAIDVEHNGGILPEELYHA 171
A L D N DG V Y+E + ++ K E L IF++ID + NG
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNG---------- 51
Query: 172 LVKAGIEIDDEELATF 187
EID E A F
Sbjct: 52 ------EIDQNEFAKF 61
Score = 29.3 bits (64), Expect = 3.9, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 83 ALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRY 140
ALF DVN G + Y +++A +S + + + D++ +G ++ EF ++
Sbjct: 4 ALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Score = 28.9 bits (63), Expect = 4.8, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 151 IFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFV-ERVDKDNNGVITFEEWRDF 207
+F+ IDV +G + EE+ A V I +E+L + + +D D NG I E+ F
Sbjct: 5 LFKEIDVNGDGAVSYEEV-KAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
>pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Lanthanum
pdb|1DJG|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Lanthanum
pdb|1DJH|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Barium
pdb|1DJH|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Barium
pdb|1DJI|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Calcium
pdb|1DJI|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Calcium
pdb|1DJW|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJW|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJX|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJX|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJY|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJY|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJZ|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-4,5-Bisphosphate
pdb|1DJZ|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-4,5-Bisphosphate
pdb|2ISD|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
pdb|2ISD|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Length = 624
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
+ +++ + I + D N +++ +++ L LNI + YAR + CD +Q
Sbjct: 4 DQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDS 63
Query: 132 VEYQEFRRY--MDDKELELYRIFQ 153
+E +E + M + E+ R F+
Sbjct: 64 LEDEEIETFYKMLTQRAEIDRAFE 87
>pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta 1
pdb|1QAS|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta 1
pdb|1QAT|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta Complex With Samarium (Iii) Chloride
pdb|1QAT|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta Complex With Samarium (Iii) Chloride
Length = 622
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 72 ESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGR 131
+ +++ + I + D N +++ +++ L LNI + YAR + CD +Q
Sbjct: 2 DQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDS 61
Query: 132 VEYQEFRRY--MDDKELELYRIFQ 153
+E +E + M + E+ R F+
Sbjct: 62 LEDEEIETFYKMLTQRAEIDRAFE 85
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 152 FQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFL 208
F D + G + E+ L+ G + + E A + VD + GV+TF+ + DF+
Sbjct: 731 FNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFM 787
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 117 ARDLLNVCDSNQDGRVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAG 176
R ++ V DS+ G++ ++EF +Y+ + + I++ D + +G I EL A AG
Sbjct: 49 CRSMVAVMDSDTTGKLGFEEF-KYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAG 107
Query: 177 IEIDDEELATFVERVDKDNNGVITFEEW 204
++ + + R D G + F+ +
Sbjct: 108 FHLNQHIYSMIIRRY-SDETGNMDFDNF 134
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 117 ARDLLNVCDSNQDGRVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAG 176
R ++ V DS+ G++ ++EF +Y+ + + I++ D + +G I EL A AG
Sbjct: 60 CRSMVAVMDSDTTGKLGFEEF-KYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAG 118
Query: 177 IEIDDEELATFVERVDKDNNGVITFEEW 204
++ + + R D G + F+ +
Sbjct: 119 FHLNQHIYSMIIRRY-SDETGNMDFDNF 145
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 34/72 (47%)
Query: 143 DKELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFE 202
+++ E FQ D +++ + EEL + G ++++ V+ DKDN+G E
Sbjct: 11 EEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQE 70
Query: 203 EWRDFLLLYPHE 214
+ +L Y E
Sbjct: 71 TFLTIMLEYGQE 82
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 19/121 (15%)
Query: 84 LFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRYMDD 143
LFN FD +G + + LS L + ++ R N+ D N+DG + +
Sbjct: 94 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYI----------N 143
Query: 144 KELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEE 203
KE E+ I +AI ++ + Y L + + + + F +++DK+ +G++T +E
Sbjct: 144 KE-EMMDIVKAI-----YDMMGKYTYPVLKE---DTPRQHVDVFFQKMDKNKDGIVTLDE 194
Query: 204 W 204
+
Sbjct: 195 F 195
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Query: 79 QRIRALFNFFDVNNSGYLDYAKIEAGLSSL-NIPSEYKY-------ARDLLNV----CDS 126
+++R FN +D+N GY++ ++ + ++ ++ +Y Y R ++V D
Sbjct: 125 EKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDK 184
Query: 127 NQDGRVEYQEFRRYM--DDKELELYRIFQAIDVE 158
N+DG V EF DD + ++FQ + VE
Sbjct: 185 NKDGIVTLDEFLESCQEDDNIMRSLQLFQNVMVE 218
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 71 GESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSE---YKYARDLLNVCDSN 127
G SK Q ++ +F F D + SGYLD +++ L + + L++ D++
Sbjct: 34 GLSKMSASQ-VKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADND 92
Query: 128 QDGRVEYQEFR 138
DG++ EF+
Sbjct: 93 GDGKIGADEFQ 103
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 19/121 (15%)
Query: 84 LFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRYMDD 143
LFN FD +G + + LS L + ++ R N+ D N+DG + +
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYI----------N 110
Query: 144 KELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEE 203
KE E+ I +AI ++ + Y L + + + + F +++DK+ +G++T +E
Sbjct: 111 KE-EMMDIVKAI-----YDMMGKYTYPVLKE---DTPRQHVDVFFQKMDKNKDGIVTLDE 161
Query: 204 W 204
+
Sbjct: 162 F 162
>pdb|2AQO|A Chain A, Crystal Structure Of E. Coli Isoaspartyl Dipeptidase
Mutant E77q
pdb|2AQO|B Chain B, Crystal Structure Of E. Coli Isoaspartyl Dipeptidase
Mutant E77q
Length = 390
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 215 ATMENIYHYLERVC-LVDIGEQAAIPEGISKHVHANRYLIAGGVAGATSRTATAPLDRL 272
A NI + C +VD+ Q P I +HVH + GG AG T+RT L RL
Sbjct: 37 AVASNIPSDIVPNCTVVDLSGQILCPGFIDQHVH---LIGGGGQAGPTTRTPEVALSRL 92
>pdb|2AQV|A Chain A, Crystal Structure Of E. Coli Isoaspartyl Dipeptidase
Mutant Y137f
pdb|2AQV|B Chain B, Crystal Structure Of E. Coli Isoaspartyl Dipeptidase
Mutant Y137f
Length = 390
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 215 ATMENIYHYLERVC-LVDIGEQAAIPEGISKHVHANRYLIAGGVAGATSRTATAPLDRL 272
A NI + C +VD+ Q P I +HVH + GG AG T+RT L RL
Sbjct: 37 AVASNIPSDIVPNCTVVDLSGQILCPGFIDQHVH---LIGGGGEAGPTTRTPEVALSRL 92
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 117 ARDLLNVCDSNQDGRVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAG 176
R ++ V DS+ G++ ++EF +Y+ + + I++ D + +G I EL A AG
Sbjct: 56 CRSMVAVMDSDTTGKLGFEEF-KYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAG 114
Query: 177 IEIDDEELATFVERVDKDNNGVITFEEW 204
++ + + R D G + F+ +
Sbjct: 115 FHLNQHIYSMIIRRY-SDETGNMDFDNF 141
>pdb|1ONW|A Chain A, Crystal Structure Of Isoaspartyl Dipeptidase From E. Coli
pdb|1ONW|B Chain B, Crystal Structure Of Isoaspartyl Dipeptidase From E. Coli
pdb|1ONX|A Chain A, Crystal Structure Of Isoaspartyl Dipeptidase From
Escherichia Coli Complexed With Aspartate
pdb|1ONX|B Chain B, Crystal Structure Of Isoaspartyl Dipeptidase From
Escherichia Coli Complexed With Aspartate
pdb|1PO9|A Chain A, Crytsal Structure Of Isoaspartyl Dipeptidase
pdb|1PO9|B Chain B, Crytsal Structure Of Isoaspartyl Dipeptidase
pdb|1POJ|A Chain A, Isoaspartyl Dipeptidase With Bound Inhibitor
pdb|1POJ|B Chain B, Isoaspartyl Dipeptidase With Bound Inhibitor
pdb|1POK|B Chain B, Crystal Structure Of Isoaspartyl Dipeptidase
pdb|1POK|A Chain A, Crystal Structure Of Isoaspartyl Dipeptidase
Length = 390
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 215 ATMENIYHYLERVC-LVDIGEQAAIPEGISKHVHANRYLIAGGVAGATSRTATAPLDRL 272
A NI + C +VD+ Q P I +HVH + GG AG T+RT L RL
Sbjct: 37 AVASNIPSDIVPNCTVVDLSGQILCPGFIDQHVH---LIGGGGEAGPTTRTPEVALSRL 92
>pdb|1YBQ|B Chain B, Crystal Structure Of Escherichia Coli Isoaspartyl
Dipeptidase Mutant D285n Complexed With
Beta-Aspartylhistidine
Length = 390
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 215 ATMENIYHYLERVC-LVDIGEQAAIPEGISKHVHANRYLIAGGVAGATSRTATAPLDRL 272
A NI + C +VD+ Q P I +HVH + GG AG T+RT L RL
Sbjct: 37 AVASNIPSDIVPNCTVVDLSGQILCPGFIDQHVH---LIGGGGEAGPTTRTPEVALSRL 92
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 60 SVTMEHVLLALG-ESKEEREQRIRALFNFFDVNNSGYLDYAKI--------EAGLSSLNI 110
++ ++AL S+ + EQ+++ F+ +D++ +GY+ A++ + S + +
Sbjct: 79 TIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKM 138
Query: 111 PSE----YKYARDLLNVCDSNQDGRVEYQEFRR 139
P + K + D+N+DG++ +EF R
Sbjct: 139 PEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 171
>pdb|1YBQ|A Chain A, Crystal Structure Of Escherichia Coli Isoaspartyl
Dipeptidase Mutant D285n Complexed With
Beta-Aspartylhistidine
Length = 390
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 215 ATMENIYHYLERVC-LVDIGEQAAIPEGISKHVHANRYLIAGGVAGATSRTATAPLDRL 272
A NI + C +VD+ Q P I +HVH + GG AG T+RT L RL
Sbjct: 37 AVASNIPSDIVPNCTVVDLSGQILCPGFIDQHVH---LIGGGGEAGPTTRTPEVALSRL 92
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 191 VDKDNNGVITFEEWRDFL----LLYPHEATMENIYHYLERVCLVDIGEQAAIPEGISKHV 246
+DKD NG I+ +EW+ + ++ E E RVC +D Q + E +H+
Sbjct: 118 IDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETF-----RVCDIDESGQLDVDEMTRQHL 172
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 83 ALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRR 139
ALF+ D + +G + + +A S I + + VCD ++ G+++ E R
Sbjct: 113 ALFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDEMTR 169
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 28/151 (18%)
Query: 80 RIRALFNFFDVNNSGYLDYAKIEAGLSSLNI------PSEYKYARDLLNVCDSNQD---- 129
R + +FNF DVN++G + ++ S + I P + K +D +
Sbjct: 17 RHKHMFNFLDVNHNGRISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYG 76
Query: 130 ------------GRVEYQEFRRYMDDKELELYRI-----FQAIDVEHNGGILPEELYHAL 172
R+ +E +RY + ++ L R+ F ID + NG I +E
Sbjct: 77 VETEWPEYIEGWKRLASEELKRYSKN-QITLIRLWGDALFDIIDKDQNGAISLDEWKAYT 135
Query: 173 VKAGIEIDDEELATFVERVDKDNNGVITFEE 203
AGI E+ D D +G + +E
Sbjct: 136 KSAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 84 LFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRYMDD 143
LFN FD +G + + LS L + ++ R N+ D N+DG + +E M D
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEE----MMD 113
Query: 144 KELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEE 203
+Y + A + +L E+ + + F +++DK+ +G++T +E
Sbjct: 114 IVKAIYDMMGA----YTYPVLAEDTPR-----------QHVDVFFQKMDKNKDGIVTLDE 158
Query: 204 W 204
+
Sbjct: 159 F 159
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 19/121 (15%)
Query: 84 LFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRRYMDD 143
LFN FD +G + + LS L + ++ R N+ D N+DG + +
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYI----------N 107
Query: 144 KELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEE 203
KE E+ I +AI ++ + Y L + + + + F +++DK+ +G++T +E
Sbjct: 108 KE-EMMDIVKAI-----YDMMGKYTYPVLKE---DTPRQHVDVFFQKMDKNKDGIVTLDE 158
Query: 204 W 204
+
Sbjct: 159 F 159
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 117 ARDLLNVCDSNQDGRVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHALVKAG 176
R ++ V DS+ G++ ++EF +Y+ + + I++ + + +G I EL A AG
Sbjct: 776 CRSMVAVMDSDTTGKLGFEEF-KYLWNNIKKWQGIYKRFETDRSGTIGSNELPGAFEAAG 834
Query: 177 IEIDDEELATFVERVDKDNNGVITFE 202
++ + + R D G + F+
Sbjct: 835 FHLNQHIYSMIIRRY-SDETGNMDFD 859
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 29.6 bits (65), Expect = 2.5, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 16/73 (21%)
Query: 79 QRIRALFNFFDVNNSGYLDYAKIEAGLSSL--------------NIPSEYKYARDLLNVC 124
++++ FN +D+N GY+ ++ A + S+ + P+E +
Sbjct: 9 EKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAE--HVERFFEKM 66
Query: 125 DSNQDGRVEYQEF 137
D NQDG V +EF
Sbjct: 67 DRNQDGVVTIEEF 79
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 29.6 bits (65), Expect = 2.6, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 136 EFRRYMDDKEL-ELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVDKD 194
E R ++ ++ + E F D + G I +EL + G EL + VD+D
Sbjct: 9 EARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDED 68
Query: 195 NNGVITFEEW 204
+G I FEE+
Sbjct: 69 GSGTIDFEEF 78
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 120 LLNVCDSNQDGRVEYQEFRRYMDDKELELY-RIFQAIDVEHNGGILPEELYHALVKAGIE 178
++++ DS+ G++ +EF Y+ +++ Y +I++ IDV+ +G + E+ AL +AG +
Sbjct: 579 MVDMLDSDGSGKLGLKEF--YILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFK 636
Query: 179 IDDEELATFVERVDKDNNGVITFE 202
+ + V R D+ +I F+
Sbjct: 637 MPCQLHQVIVARF-ADDQLIIDFD 659
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 63/162 (38%), Gaps = 42/162 (25%)
Query: 61 VTMEHVLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSL--NIPSEYKYAR 118
+ E LAL ++ ++ +F+ FD ++G L + + LS N P
Sbjct: 67 INKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAP------- 119
Query: 119 DLLNVCDSNQDGRVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYH----ALVK 174
+DDK ++ FQ D++ G I +E+ L +
Sbjct: 120 ----------------------IDDK---IHFSFQLYDLKQQGFIERQEVKQMVVATLAE 154
Query: 175 AGIEIDDEELATFV----ERVDKDNNGVITFEEWRDFLLLYP 212
+G+ + D + + E D ++G I EEWR +L +P
Sbjct: 155 SGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHP 196
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 13/97 (13%)
Query: 148 LYRIFQAID--VEHNGGILPEELYHALVKAGIEIDDEELATFVERV----DKDNNGVITF 201
LY +F+ I V +G I EE AL K +++ + F +RV D +NG++ F
Sbjct: 50 LYELFKKISSAVIDDGLINKEEFQLALFKT-----NKKESLFADRVFDLFDTKHNGILGF 104
Query: 202 EEWRDFLLLYPHEATMENIYHYLERVCLVDIGEQAAI 238
EE+ L ++ A +++ H+ L D+ +Q I
Sbjct: 105 EEFARALSVFHPNAPIDDKIHF--SFQLYDLKQQGFI 139
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 83 ALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQE----FR 138
A+ N NS L A + S L E K D+ D N DG+++ QE +
Sbjct: 31 AIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYS 90
Query: 139 RYMDDK---------ELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVE 189
+ ++ E E+ I A D + NG I E + + ++L + +
Sbjct: 91 KLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQ 150
Query: 190 RVDKDNNGVITFEE 203
+ D+D NG I+ +E
Sbjct: 151 KFDQDGNGKISVDE 164
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 64 EHVLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEA--GLSSLNIPSEYKYARDLL 121
E V +A+ + ++ + F FD + +G + ++ + GL L E K ++++
Sbjct: 128 EFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHL----ESKTWKEMI 183
Query: 122 NVCDSNQDGRVEYQEFRRYM 141
+ DSN DG V+++EF + +
Sbjct: 184 SGIDSNNDGDVDFEEFCKMI 203
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 63/162 (38%), Gaps = 42/162 (25%)
Query: 61 VTMEHVLLALGESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSL--NIPSEYKYAR 118
+ E LAL ++ ++ +F+ FD ++G L + + LS N P
Sbjct: 36 INKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAP------- 88
Query: 119 DLLNVCDSNQDGRVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYH----ALVK 174
+DDK ++ FQ D++ G I +E+ L +
Sbjct: 89 ----------------------IDDK---IHFSFQLYDLKQQGFIERQEVKQMVVATLAE 123
Query: 175 AGIEIDDEELATFV----ERVDKDNNGVITFEEWRDFLLLYP 212
+G+ + D + + E D ++G I EEWR +L +P
Sbjct: 124 SGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHP 165
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 148 LYRIFQAID--VEHNGGILPEELYHALVKAGIEIDDEELATFVERV----DKDNNGVITF 201
LY +F+ I V +G I EE AL K ++ + F +RV D +NG++ F
Sbjct: 19 LYELFKKISSAVIDDGLINKEEFQLALFKTN-----KKESLFADRVFDLFDTKHNGILGF 73
Query: 202 EEWRDFLLLYPHEATMENIYHYLERVCLVDIGEQAAI 238
EE+ L ++ A +++ H+ L D+ +Q I
Sbjct: 74 EEFARALSVFHPNAPIDDKIHF--SFQLYDLKQQGFI 108
>pdb|2KI3|A Chain A, Structural And Biochemical Characterization Of Fk506
Binding Domain From Plasmodium Vivax
pdb|3IHZ|A Chain A, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35 In Complex With Fk506
pdb|3IHZ|B Chain B, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35 In Complex With Fk506
pdb|3NI6|A Chain A, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35
pdb|3NI6|B Chain B, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35
pdb|3PA7|A Chain A, Crystal Structure Of Fkbp From Plasmodium Vivax In
Complex With Tetrapeptide Alpf
pdb|3PA7|B Chain B, Crystal Structure Of Fkbp From Plasmodium Vivax In
Complex With Tetrapeptide Alpf
Length = 126
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 25 QIFDSKHARGVPLFFRFINGDTAKQWD 51
++FDS R VP F G+ K WD
Sbjct: 52 KVFDSSRERNVPFKFHLGQGEVIKGWD 78
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 71 GESKEEREQRIRALFNFFDVNNSGYLDYAKIEAGLS--------SLNIPSEYKYARDLLN 122
S+ ER++ +F +DV+ +G L+ +++ + S++ K+ LL
Sbjct: 188 ASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDXXELVRPSISGGDLDKFRECLLT 247
Query: 123 VCDSNQDGRVEYQEF 137
CD N+DG+++ E
Sbjct: 248 HCDXNKDGKIQKSEL 262
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 28.9 bits (63), Expect = 4.3, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 160 NGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
+G I +EL + G EEL ++ VD+D +G + F+E+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 28.9 bits (63), Expect = 4.3, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 160 NGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
+G I +EL + G EEL ++ VD+D +G + F+E+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 75 EEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEY 134
EE Q + A+F FD N +D+ + A L+ + + + + D +++G ++
Sbjct: 55 EEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDR 114
Query: 135 QEFRRYMDDKELELYRIFQA----IDVEHNGGIL-PEELYHALVKAGIEIDDEELA--TF 187
QE ++ +Y++ +A ++ E G +L PEE+ + E D +L+ F
Sbjct: 115 QELLDIVES----IYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEF 170
Query: 188 VERVDKD 194
VE +D
Sbjct: 171 VEGARRD 177
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 28.9 bits (63), Expect = 4.4, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 160 NGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
+G I +EL + G EEL ++ VD+D +G + F+E+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 28.9 bits (63), Expect = 4.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 189 ERVDKDNNGVITFEEWRDFLLLYPHEATMENIYHYLERVCLVDIGEQAA 237
E+ DK+ +G ++ +E+R+ L + T E+I + E + + GE A
Sbjct: 8 EKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNA 56
Score = 28.1 bits (61), Expect = 8.1, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 117 ARDLLNVCDSNQDGRVEYQEFRR-------YMDDKELELYRIFQAIDVEHNGGILPEELY 169
A+ + D N+DG++ EFR Y + ++ + F+ IDV+ NG + +E
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQE--DIVKFFEEIDVDGNGELNADEFT 60
Query: 170 HALVK 174
+ K
Sbjct: 61 SCIEK 65
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 77 REQRIRALFNF------FDVNNSGYLDYAKIEAGLSSL--------NIPSEYKYARDLLN 122
R Q++++ F +D ++SG+++ +++ L L + +Y +L
Sbjct: 95 RCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLK 154
Query: 123 VCDSNQDGRVEYQEFRRYMDDKE-------------LELYRIFQAIDVEHNGGILPEELY 169
+ DSN DG++E E R + +E E + F+ D + NG I EL
Sbjct: 155 LFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENEL- 213
Query: 170 HALVKAGIEIDDEEL 184
AL+K E + +EL
Sbjct: 214 DALLKDLCEKNKQEL 228
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 28.9 bits (63), Expect = 5.3, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 147 ELYRIFQAIDVEHNGGILPEEL--YHALVKAGIE-IDDEELATFVERVDKDNNGVITFEE 203
++ + F ID + +G I +EL + + AG + D E F++ D D +G I +E
Sbjct: 43 DIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDE 102
Query: 204 W 204
W
Sbjct: 103 W 103
>pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|B Chain B, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9P|A Chain A, Crystal Structure Of Calcium Free (or Apo) Human S100a6
Length = 90
Score = 28.9 bits (63), Expect = 5.4, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 166 EELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEWRDFL 208
+EL + G ++ D E+A +E +D++ + + F+E+ FL
Sbjct: 35 KELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFL 77
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 28.5 bits (62), Expect = 5.7, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 147 ELYRIFQAIDVEHNGGILPEELYHAL--VKAGIEI-DDEELATFVERVDKDNNGVITFEE 203
+L IF+ +D + +G I +EL + L ++G + E TF+ D D +G I EE
Sbjct: 42 QLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEE 101
Query: 204 WRDFL 208
+++ +
Sbjct: 102 FQEMV 106
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 28.5 bits (62), Expect = 6.0, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 119 DLLNVCDSNQDGRVEYQEFRRYMD 142
DL+ D N DGR+++ EF + M+
Sbjct: 9 DLMKDSDKNNDGRIDFDEFLKMME 32
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 28.5 bits (62), Expect = 6.2, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 160 NGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
+G I +EL + G EEL ++ VD+D +G + F+E+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 28.5 bits (62), Expect = 6.2, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 160 NGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
+G I +EL + G EEL ++ VD+D +G + F+E+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 28.5 bits (62), Expect = 6.3, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 74 KEEREQRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVE 133
++ RE+ ++A F FD +NSG + + L + ++++ D N D ++
Sbjct: 5 RDSREEILKA-FRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEID 63
Query: 134 YQEFRRYMDDKEL 146
EF R M L
Sbjct: 64 EDEFIRIMKKTSL 76
>pdb|4G4F|A Chain A, Crystal Structure Of Gitrl From Bushbaby
Length = 126
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 237 AIPEGISKHVHANRYLIAGGVAGATSRTATAP----LDRLKVVLQVQTTRAHIMPAIRDI 292
++PEG K + YLI G VA +T+ AP L + + +LQ T+ + I
Sbjct: 31 SLPEGKLKILQDGLYLIYGQVAPSTAYKGVAPFAVQLRKNEAMLQTLTSNS-------TI 83
Query: 293 WRDGGISGFFRGNGLNVLKVAPESAIKFYTY 323
+ GG F G+ ++++ +K TY
Sbjct: 84 YDVGGTYEFHAGDIIDLIFDDEHQVLKNNTY 114
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 28.5 bits (62), Expect = 6.6, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 160 NGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
+G I +EL + G EEL ++ VD+D +G + F+E+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 28.5 bits (62), Expect = 6.7, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 160 NGGILPEELYHALVKAGIEIDDEELATFVERVDKDNNGVITFEEW 204
+G I +EL + G EEL ++ VD+D +G + F+E+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 28.1 bits (61), Expect = 7.4, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 80 RIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFRR 139
+ R LFN D SG+L + L ++P + N+ D +QDG++ +EF
Sbjct: 15 KYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQ--AQLASIWNLSDIDQDGKLTAEEFIL 72
Query: 140 YMDDKELELYRIFQAIDVEHNGGILPEEL 168
M IDV +G LP L
Sbjct: 73 AM-----------HLIDVAMSGQPLPPVL 90
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 10/132 (7%)
Query: 79 QRIRALFNFFDVNNSGYLDYAKIEAGLSSLNIPSEYKYARDLLNVCDSNQDGRVEYQEFR 138
Q + FN D N G++D + L+S+ +Y ++ S G + + F
Sbjct: 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMM----SEAPGPINFTMFL 62
Query: 139 RYMDDK------ELELYRIFQAIDVEHNGGILPEELYHALVKAGIEIDDEELATFVERVD 192
+K E + F D E +G I + L L G DEE+
Sbjct: 63 TMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAP 122
Query: 193 KDNNGVITFEEW 204
D G + E+
Sbjct: 123 IDKKGNFNYVEF 134
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 120 LLNVCDSNQDGRVEYQEFRRYMDDKELELY-RIFQAIDVEHNGGILPEELYHALVKAGIE 178
++++ D + G++ +EF Y+ +++ Y +I++ IDV+ +G + E+ AL +AG +
Sbjct: 580 MVDMLDEDGSGKLGLKEF--YILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFK 637
Query: 179 IDDEELATFVERVDKDNNGVITFE 202
+ + V R D+ +I F+
Sbjct: 638 LPCQLHQVIVARF-ADDELIIDFD 660
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 120 LLNVCDSNQDGRVEYQEFRRYMDDKELELY-RIFQAIDVEHNGGILPEELYHALVKAGIE 178
++++ D + G++ +EF Y+ +++ Y +I++ IDV+ +G + E+ AL +AG +
Sbjct: 580 MVDMLDEDGSGKLGLKEF--YILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFK 637
Query: 179 IDDEELATFVERVDKDNNGVITFE 202
+ + V R D+ +I F+
Sbjct: 638 LPCQLHQVIVARF-ADDELIIDFD 660
>pdb|1G29|1 Chain 1, Malk
pdb|1G29|2 Chain 2, Malk
Length = 372
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 16/94 (17%)
Query: 121 LNVCDS--NQDGRVEYQEFRRYMDDKELELYRIFQAIDVEHNGGILPEELYHA------- 171
+N D+ +DG V++ EFR + + E+ + E GI PE+LY A
Sbjct: 245 MNFLDAIVTEDGFVDFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDLYDAMFAQVRV 304
Query: 172 ----LVKAGIEIDDEELATFVERVDKDNNGVITF 201
LV+A +EI E L + ER+ + G +TF
Sbjct: 305 PGENLVRAVVEI-VENLGS--ERIVRLRVGGVTF 335
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 120 LLNVCDSNQDGRVEYQEFRRYMDDKELELY-RIFQAIDVEHNGGILPEELYHALVKAGIE 178
++++ D + G++ +EF Y+ +++ Y +I++ IDV+ +G + E+ AL +AG +
Sbjct: 580 MVDMLDEDGSGKLGLKEF--YILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFK 637
Query: 179 IDDEELATFVERVDKDNNGVITFE 202
+ + V R D+ +I F+
Sbjct: 638 LPCQLHQVIVARF-ADDELIIDFD 660
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.140 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,421,698
Number of Sequences: 62578
Number of extensions: 484558
Number of successful extensions: 2324
Number of sequences better than 100.0: 265
Number of HSP's better than 100.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 1626
Number of HSP's gapped (non-prelim): 557
length of query: 367
length of database: 14,973,337
effective HSP length: 100
effective length of query: 267
effective length of database: 8,715,537
effective search space: 2327048379
effective search space used: 2327048379
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)