Your job contains 1 sequence.
>039490
MGNNVREEIMDLDLNLDPSDPSNGSVLGLGSLLNELETAHGRIEERIRQLEAVTSRARQR
QRWRQGQSNTQMVNVSLEPTVSSVPSEVSLLSGECSINPQVRTIENVKTGKRGSSHLIAK
ALGIHTDTKRAGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPA
CNGEVTDASIIPIYGNGNSNDLQKLKSKESCLKVPPRPLARRIESVRQQLVNRRPVSTPI
EVRIQQFNSIVDAARHQTGSLDLDAAVRSGELEVNDPLLHISRVLPASISSLSSALTSAM
DSAERLVGDLEAYINSDNLRRNHQEFSHADTDSVSLISADVQAGSQSLDMATEIDSGVPR
SASSVRTDVPTNIVRLQSEIRDTAMEVNLNAPHSSSSRRRSASLRASDVDSGICRELRRR
RLR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039490
(423 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2050533 - symbol:AT2G44410 species:3702 "Arabi... 411 4.6e-46 3
TAIR|locus:2095833 - symbol:AT3G58030 species:3702 "Arabi... 330 7.9e-30 1
TAIR|locus:2064584 - symbol:AT2G42030 species:3702 "Arabi... 290 1.4e-25 1
TAIR|locus:2016437 - symbol:AT1G19310 species:3702 "Arabi... 230 3.1e-19 1
TAIR|locus:2049023 - symbol:AT2G23780 species:3702 "Arabi... 227 6.5e-19 1
TAIR|locus:2037294 - symbol:AT1G74990 species:3702 "Arabi... 223 1.7e-18 1
TAIR|locus:2123663 - symbol:RMA2 "RING membrane-anchor 2"... 211 3.3e-17 1
UNIPROTKB|F1N0B8 - symbol:RNF5 "Uncharacterized protein" ... 207 1.0e-16 1
UNIPROTKB|A4IFC2 - symbol:RNF185 "RNF185 protein" species... 206 1.3e-16 1
UNIPROTKB|E2QS10 - symbol:RNF5 "Uncharacterized protein" ... 206 1.3e-16 1
UNIPROTKB|F1PCX5 - symbol:RNF185 "Uncharacterized protein... 206 1.3e-16 1
UNIPROTKB|E7EM95 - symbol:RNF5 "E3 ubiquitin-protein liga... 206 1.3e-16 1
UNIPROTKB|Q96GF1 - symbol:RNF185 "E3 ubiquitin-protein li... 206 1.3e-16 1
UNIPROTKB|Q99942 - symbol:RNF5 "E3 ubiquitin-protein liga... 206 1.3e-16 1
UNIPROTKB|A5A8Y3 - symbol:RNF5 "Uncharacterized protein" ... 206 1.3e-16 1
UNIPROTKB|F2Z4Y3 - symbol:RNF185 "Uncharacterized protein... 206 1.3e-16 1
FB|FBgn0030693 - symbol:CG8974 species:7227 "Drosophila m... 203 3.1e-16 1
MGI|MGI:1922078 - symbol:Rnf185 "ring finger protein 185"... 202 4.1e-16 1
RGD|1564777 - symbol:Rnf185 "ring finger protein 185" spe... 202 4.1e-16 1
MGI|MGI:1860076 - symbol:Rnf5 "ring finger protein 5" spe... 201 5.3e-16 1
RGD|1588458 - symbol:Rnf5 "ring finger protein 5, E3 ubiq... 201 5.3e-16 1
TAIR|locus:2124004 - symbol:RMA3 "RING membrane-anchor 3"... 201 5.3e-16 1
ZFIN|ZDB-GENE-040426-1977 - symbol:rnf185 "ring finger pr... 201 5.3e-16 1
WB|WBGene00004381 - symbol:rnf-5 species:6239 "Caenorhabd... 199 9.2e-16 1
UNIPROTKB|Q09463 - symbol:rnf-5 "RING finger protein 5" s... 199 9.2e-16 1
DICTYBASE|DDB_G0285333 - symbol:DDB_G0285333 "RING finger... 203 1.5e-15 1
UNIPROTKB|F1NHH0 - symbol:RNF185 "E3 ubiquitin-protein li... 196 2.1e-15 1
UNIPROTKB|Q5ZIR9 - symbol:RNF185 "E3 ubiquitin-protein li... 196 2.1e-15 1
UNIPROTKB|Q6R567 - symbol:RMA1H1 "E3 ubiquitin-protein li... 196 2.1e-15 1
FB|FBgn0052581 - symbol:CG32581 species:7227 "Drosophila ... 203 2.1e-15 1
TAIR|locus:2128746 - symbol:RMA1 "RING membrane-anchor 1"... 188 1.7e-14 1
UNIPROTKB|E9PN08 - symbol:RNF5 "E3 ubiquitin-protein liga... 183 6.5e-14 1
FB|FBgn0052847 - symbol:CG32847 species:7227 "Drosophila ... 181 1.1e-13 1
ASPGD|ASPL0000031841 - symbol:AN5681 species:162425 "Emer... 134 3.7e-06 1
UNIPROTKB|A2AE50 - symbol:TRIM26 "Tripartite motif-contai... 111 6.5e-06 1
UNIPROTKB|H0Y340 - symbol:RFWD2 "E3 ubiquitin-protein lig... 109 1.1e-05 1
UNIPROTKB|Q5SPU2 - symbol:TRIM26 "Tripartite motif-contai... 111 3.9e-05 1
UNIPROTKB|G4NE71 - symbol:MGG_00145 "Uncharacterized prot... 126 4.1e-05 1
FB|FBgn0085337 - symbol:CG34308 species:7227 "Drosophila ... 102 6.3e-05 1
UNIPROTKB|E7EQW4 - symbol:BRCA1 "Breast cancer type 1 sus... 118 6.9e-05 1
UNIPROTKB|A2AE51 - symbol:TRIM26 "Tripartite motif-contai... 110 7.5e-05 1
UNIPROTKB|E1B7M2 - symbol:TRIM31 "Uncharacterized protein... 121 9.1e-05 1
ZFIN|ZDB-GENE-070912-225 - symbol:ftr03 "finTRIM family, ... 119 9.8e-05 1
UNIPROTKB|E7EWN5 - symbol:BRCA1 "Breast cancer type 1 sus... 118 0.00011 2
UNIPROTKB|F1MK05 - symbol:RNF170 "E3 ubiquitin-protein li... 117 0.00011 2
TAIR|locus:2057780 - symbol:PEX10 "peroxin 10" species:37... 121 0.00011 1
FB|FBgn0037384 - symbol:dgrn "degringolade" species:7227 ... 119 0.00014 1
UNIPROTKB|H0YH05 - symbol:RNF10 "RING finger protein 10" ... 98 0.00017 1
UNIPROTKB|F1NQ64 - symbol:RFWD2 "Uncharacterized protein"... 123 0.00017 1
UNIPROTKB|G3MWR7 - symbol:TRIM31 "Uncharacterized protein... 121 0.00018 1
UNIPROTKB|E7EN90 - symbol:BRCA1 "Breast cancer type 1 sus... 96 0.00028 1
DICTYBASE|DDB_G0282693 - symbol:pex10 "peroxisome biogene... 117 0.00031 1
RGD|2218 - symbol:Brca1 "breast cancer 1, early onset" sp... 121 0.00032 2
UNIPROTKB|G3V8S5 - symbol:Brca1 "RCG34321, isoform CRA_a"... 121 0.00032 2
ZFIN|ZDB-GENE-070912-318 - symbol:ftr27 "finTRIM family, ... 108 0.00033 1
UNIPROTKB|Q3B891 - symbol:BRCA1 "Breast cancer type 1 sus... 118 0.00035 1
UNIPROTKB|D6RBN4 - symbol:TRIM23 "E3 ubiquitin-protein li... 95 0.00036 1
UNIPROTKB|E5RI62 - symbol:TRIM17 "E3 ubiquitin-protein li... 95 0.00036 1
UNIPROTKB|J3KSI2 - symbol:RNF138 "E3 ubiquitin-protein li... 95 0.00036 1
UNIPROTKB|Q95153 - symbol:BRCA1 "Breast cancer type 1 sus... 118 0.00037 2
UNIPROTKB|F1PAI7 - symbol:BRCA1 "Breast cancer type 1 sus... 118 0.00037 2
UNIPROTKB|F1S705 - symbol:RFWD2 "Uncharacterized protein"... 117 0.00038 1
ZFIN|ZDB-GENE-070912-227 - symbol:ftr05 "finTRIM family, ... 114 0.00042 1
UNIPROTKB|F1RZ52 - symbol:TRIM26 "Tripartite motif-contai... 118 0.00043 1
UNIPROTKB|O77666 - symbol:TRIM26 "Tripartite motif-contai... 118 0.00043 1
ZFIN|ZDB-GENE-070424-55 - symbol:ftr61 "finTRIM family, m... 118 0.00043 1
UNIPROTKB|F1RWB5 - symbol:F1RWB5 "Uncharacterized protein... 115 0.00044 1
TAIR|locus:2059359 - symbol:COP1 "CONSTITUTIVE PHOTOMORPH... 119 0.00044 1
UNIPROTKB|E7EUM2 - symbol:BRCA1 "Breast cancer type 1 sus... 118 0.00052 1
GENEDB_PFALCIPARUM|PF10_0127 - symbol:PF10_0127 "hypothet... 117 0.00052 1
UNIPROTKB|Q8IJR5 - symbol:PF10_0127 "Conserved Plasmodium... 117 0.00052 1
RGD|1359126 - symbol:Trim26 "tripartite motif-containing ... 117 0.00055 1
MGI|MGI:1337056 - symbol:Trim26 "tripartite motif-contain... 117 0.00055 1
FB|FBgn0038125 - symbol:CG8141 species:7227 "Drosophila m... 111 0.00057 1
UNIPROTKB|G3XAC3 - symbol:BRCA1 "Breast cancer 1, early o... 118 0.00058 1
UNIPROTKB|J3QRB8 - symbol:RNF112 "RING finger protein 112... 93 0.00060 1
UNIPROTKB|K7GL56 - symbol:LOC100517591 "Uncharacterized p... 109 0.00062 1
UNIPROTKB|A2AE48 - symbol:TRIM26 "Tripartite motif-contai... 111 0.00063 1
UNIPROTKB|E2RRJ5 - symbol:RFWD2 "Uncharacterized protein"... 118 0.00064 1
UNIPROTKB|E7ETR2 - symbol:BRCA1 "Breast cancer 1, early o... 118 0.00067 1
UNIPROTKB|F1RWB4 - symbol:LOC100737099 "Uncharacterized p... 115 0.00067 1
UNIPROTKB|D6RAS2 - symbol:TRIM60 "Tripartite motif-contai... 92 0.00077 1
UNIPROTKB|Q8NHY2 - symbol:RFWD2 "E3 ubiquitin-protein lig... 117 0.00082 1
MGI|MGI:104537 - symbol:Brca1 "breast cancer 1" species:1... 121 0.00082 2
MGI|MGI:1347046 - symbol:Rfwd2 "ring finger and WD repeat... 117 0.00082 1
UNIPROTKB|F1MHX1 - symbol:RFWD2 "Uncharacterized protein"... 117 0.00082 1
UNIPROTKB|F8W8H7 - symbol:BRCA1 "Breast cancer type 1 sus... 118 0.00085 2
UNIPROTKB|E7EMP0 - symbol:BRCA1 "Breast cancer type 1 sus... 118 0.00088 2
UNIPROTKB|F1SAL7 - symbol:LOC100517591 "Uncharacterized p... 109 0.00090 1
>TAIR|locus:2050533 [details] [associations]
symbol:AT2G44410 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002685 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:BT011628 EMBL:BT012267 IPI:IPI00542531
RefSeq:NP_181969.2 UniGene:At.21385 ProteinModelPortal:Q6NLR3
SMR:Q6NLR3 EnsemblPlants:AT2G44410.1 GeneID:819048
KEGG:ath:AT2G44410 TAIR:At2g44410 HOGENOM:HOG000143348
InParanoid:Q6NLR3 OMA:RRTIDSI PhylomeDB:Q6NLR3
ProtClustDB:CLSN2918256 Genevestigator:Q6NLR3 Uniprot:Q6NLR3
Length = 413
Score = 411 (149.7 bits), Expect = 4.6e-46, Sum P(3) = 4.6e-46
Identities = 81/170 (47%), Positives = 106/170 (62%)
Query: 102 RTIENVKTGKRGSSHLIAKALGIHTDTKRAGAGGGEFFDCNICLDMARDPVLTCCGHLFC 161
R+ E + ++LIAKAL + K + GG FFDCNICL+ A DP+LTCCGHLFC
Sbjct: 90 RSRERLVENGENKTYLIAKALNME---KTSSVPGG-FFDCNICLEKAEDPILTCCGHLFC 145
Query: 162 WSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGNSNDLQKLKSKESCLKVPPRPLAR 221
W CFYQLP Y N+KECP C+GEVTDA +IPIYGNG+ D K K ++ + +PPRP A+
Sbjct: 146 WGCFYQLPLIYLNIKECPVCDGEVTDAEVIPIYGNGDDCDGTKPKLEDCGISLPPRPNAK 205
Query: 222 RIESVRQQLVNRRPVSTPIEVRIQQFNSIVDAARHQTGSLDLDAAVRSGE 271
R+ESVRQ+++NR P N ++ R S+ L A + E
Sbjct: 206 RVESVRQKIINRGNPFFP-----GHENEAIEHIRRTIDSIGLQALAQGDE 250
Score = 54 (24.1 bits), Expect = 4.6e-46, Sum P(3) = 4.6e-46
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 38 TAHGRIEERIRQLEAVTS 55
+A RI+ERIRQLE + S
Sbjct: 41 SAQERIQERIRQLEVIVS 58
Score = 46 (21.3 bits), Expect = 4.6e-46, Sum P(3) = 4.6e-46
Identities = 23/94 (24%), Positives = 42/94 (44%)
Query: 309 DLEAYINSDNLRRNHQEFSHADTDSVSLISADVQAGSQSLDMATEIDSG-----VPRSAS 363
D+++++++ +LRRN + S A S ++ + + S + + S VP S+
Sbjct: 312 DVDSFVDTTSLRRNRRRPSPAVRASYQRNRSNNASQTISFRLGSSASSAPREFAVPSSSI 371
Query: 364 SVRTDV--PTNIVRLQ---SEIRDTAMEVNLNAP 392
R+ PT +V S R +VN N P
Sbjct: 372 MTRSQTVNPTEVVTSSTSASSSRRRTEDVN-NGP 404
Score = 40 (19.1 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 338 SADVQAGSQSLDMATEIDSGVPRSASSVRTDVPTNIVRLQSEIR 381
S+ + SQ+++ + S S+S RT+ N R +S R
Sbjct: 368 SSSIMTRSQTVNPTEVVTSSTSASSSRRRTEDVNNGPRTRSRRR 411
>TAIR|locus:2095833 [details] [associations]
symbol:AT3G58030 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10666 HOGENOM:HOG000090666
ProtClustDB:CLSN2683808 EMBL:AY081289 EMBL:BT006585 IPI:IPI00546255
RefSeq:NP_001190122.1 RefSeq:NP_191362.2 RefSeq:NP_974453.1
RefSeq:NP_974454.1 UniGene:At.34773 ProteinModelPortal:Q8RXF2
SMR:Q8RXF2 EnsemblPlants:AT3G58030.1 EnsemblPlants:AT3G58030.2
EnsemblPlants:AT3G58030.3 EnsemblPlants:AT3G58030.4 GeneID:824972
KEGG:ath:AT3G58030 TAIR:At3g58030 eggNOG:NOG244906
InParanoid:Q8RXF2 OMA:HARRIES PhylomeDB:Q8RXF2
Genevestigator:Q8RXF2 Uniprot:Q8RXF2
Length = 436
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 73/173 (42%), Positives = 96/173 (55%)
Query: 105 ENVKTGKRGSSHLIAKALGIHTDTKRAGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSC 164
E++K + G L L D +++ G FFDCNICLD++++PVLTCCGHL+CW C
Sbjct: 103 EDLKMCENGDGALGDGVLDKKADVEKSSGSDGNFFDCNICLDLSKEPVLTCCGHLYCWPC 162
Query: 165 FYQLPYAYRNVKECPACNGEVTDASIIPIYGNGNSNDLQKLKSKESC-LKVPPRPLARRI 223
YQ + KECP C GEVT ++ PIYG GN K + +ES KVP RP ARRI
Sbjct: 163 LYQW-LQISDAKECPVCKGEVTSKTVTPIYGRGN----HKREIEESLDTKVPMRPHARRI 217
Query: 224 ESVRQQLVNRRPVSTPIEVRIQQFNSIVDAARHQTGSLDLDAAVRSGELEVND 276
ES+R + R P + P+E I++ + D R T D R VND
Sbjct: 218 ESLRNT-IQRSPFTIPMEEMIRRIQNRFD--RDSTPVPDFSN--REASERVND 265
>TAIR|locus:2064584 [details] [associations]
symbol:AT2G42030 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0046872 GO:GO:0008270 EMBL:U90439 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HSSP:P15919 EMBL:AY058184
EMBL:AY072117 EMBL:AY096666 IPI:IPI00537204 PIR:A84849
RefSeq:NP_181733.1 UniGene:At.20315 UniGene:At.74233
ProteinModelPortal:P93744 SMR:P93744 EnsemblPlants:AT2G42030.1
GeneID:818803 KEGG:ath:AT2G42030 TAIR:At2g42030 eggNOG:NOG251015
HOGENOM:HOG000090666 InParanoid:P93744 OMA:SEAKECP PhylomeDB:P93744
ProtClustDB:CLSN2683808 ArrayExpress:P93744 Genevestigator:P93744
Uniprot:P93744
Length = 425
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 65/155 (41%), Positives = 88/155 (56%)
Query: 93 GECSINPQVRTIENVKTGKRGSSHLIAKALGIHT-DTKRAGAGGGEFFDCNICLDMARDP 151
GE S+ R IE+ K + GS + + D +++ G FFDC ICLD+++DP
Sbjct: 92 GEGSMASGERVIEDSKKCENGSKVMAEDNVTEEKRDVEKSVGSDGSFFDCYICLDLSKDP 151
Query: 152 VLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGNSNDLQKLKSKE-S 210
V+T CGHL+CWSC YQ KECP C GEV+ ++ PIYG G +QK +S+E S
Sbjct: 152 VVTNCGHLYCWSCLYQW-LQVSEAKECPVCKGEVSVKTVTPIYGRG----IQKRESEEVS 206
Query: 211 CLKVPPRPLARRIESVRQQLVNRRPVSTPIEVRIQ 245
K+P RP ARR ES+R L + T I +Q
Sbjct: 207 NTKIPSRPQARRTESLRTTLNRSGHIPTEIFRHLQ 241
>TAIR|locus:2016437 [details] [associations]
symbol:AT1G19310 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HSSP:P38398 EMBL:AC025808 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 EMBL:AY057705 EMBL:AY116959
EMBL:AY085230 IPI:IPI00544945 PIR:E86326 RefSeq:NP_564078.1
UniGene:At.16708 ProteinModelPortal:Q9LN67 SMR:Q9LN67 IntAct:Q9LN67
EnsemblPlants:AT1G19310.1 GeneID:838513 KEGG:ath:AT1G19310
TAIR:At1g19310 InParanoid:Q9LN67 OMA:NANPWFM PhylomeDB:Q9LN67
ProtClustDB:CLSN2917022 Genevestigator:Q9LN67 Uniprot:Q9LN67
Length = 226
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 38/89 (42%), Positives = 58/89 (65%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGN 198
F+CNICLD+A+DP++T CGHLFCW C Y+ + + K+CP C + + ++P+YG G
Sbjct: 21 FECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKDCPVCKAVIEEDRLVPLYGRGK 80
Query: 199 SNDLQKLKSKESCLKVPPRPLARRIESVR 227
S+ + KS L+VP RP +R E+ +
Sbjct: 81 SSADPRSKSIPG-LEVPNRPSGQRPETAQ 108
>TAIR|locus:2049023 [details] [associations]
symbol:AT2G23780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006661 "phosphatidylinositol biosynthetic
process" evidence=RCA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC004482 HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
HSSP:P22681 EMBL:BT008560 EMBL:BT008701 EMBL:AK229514
IPI:IPI00539367 PIR:T02413 RefSeq:NP_179958.1 UniGene:At.12626
ProteinModelPortal:O64824 SMR:O64824 EnsemblPlants:AT2G23780.1
GeneID:816910 KEGG:ath:AT2G23780 TAIR:At2g23780 InParanoid:O64824
OMA:VNGESST PhylomeDB:O64824 ProtClustDB:CLSN2912869
ArrayExpress:O64824 Genevestigator:O64824 Uniprot:O64824
Length = 227
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 37/91 (40%), Positives = 57/91 (62%)
Query: 135 GGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIY 194
GG+F +CNIC ++A+DP++T CGHLFCW C Y+ + + + +ECP C V D ++P+Y
Sbjct: 23 GGDF-ECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQDDKLVPLY 81
Query: 195 GNGNSNDLQKLKSKESCLKVPPRPLARRIES 225
G G N + L++P RP +R E+
Sbjct: 82 GRGK-NQTDPRSKRYPGLRIPNRPTGQRPET 111
>TAIR|locus:2037294 [details] [associations]
symbol:AT1G74990 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC008263 EMBL:AC013258
InterPro:IPR017907 HOGENOM:HOG000238304 EMBL:AY088830 EMBL:BT030642
IPI:IPI00531818 PIR:G96779 RefSeq:NP_177636.1 UniGene:At.34824
ProteinModelPortal:Q9S7D6 SMR:Q9S7D6 EnsemblPlants:AT1G74990.1
GeneID:843837 KEGG:ath:AT1G74990 TAIR:At1g74990 eggNOG:NOG241331
InParanoid:Q9S7D6 OMA:GCNICLE PhylomeDB:Q9S7D6
ProtClustDB:CLSN2914219 Genevestigator:Q9S7D6 Uniprot:Q9S7D6
Length = 137
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 42/112 (37%), Positives = 62/112 (55%)
Query: 122 LGIHTDTKRAGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPAC 181
+ I+T T F CNICL++AR+P++T CGHLFCW C Y+ + + CP C
Sbjct: 1 MAINTITNEEDDASNNF-GCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVC 59
Query: 182 NGEVTDASIIPIYGNGNSNDLQKLKSKESCLKVPPRPLARRIESVRQQLVNR 233
V + +++P+YG G + + K S + VP RP A R E+ R +L R
Sbjct: 60 KALVKEDTLVPLYGMGKPSSDPRSKLN-SGVTVPNRPAATRTETARPRLEQR 110
>TAIR|locus:2123663 [details] [associations]
symbol:RMA2 "RING membrane-anchor 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005783 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL161572
GO:GO:0004842 InterPro:IPR017907 HOGENOM:HOG000238304 KO:K10666
EMBL:U81598 EMBL:BT003053 EMBL:AK227310 IPI:IPI00535055 PIR:T09043
RefSeq:NP_194556.1 UniGene:At.32032 HSSP:P15919
ProteinModelPortal:P93030 SMR:P93030 IntAct:P93030 STRING:P93030
EnsemblPlants:AT4G28270.1 GeneID:828942 KEGG:ath:AT4G28270
TAIR:At4g28270 eggNOG:KOG0823 InParanoid:P93030 OMA:GESSSNM
PhylomeDB:P93030 ProtClustDB:PLN03208 Genevestigator:P93030
Uniprot:P93030
Length = 193
Score = 211 (79.3 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 44/105 (41%), Positives = 58/105 (55%)
Query: 127 DTKRAGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKE--------- 177
DT +GG FDCNICLD RDPV+T CGHLFCW C ++ YA N ++
Sbjct: 9 DTTLVDSGGD--FDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKR 66
Query: 178 ----CPACNGEVTDASIIPIYGNGNSNDLQKLKSKESCLKVPPRP 218
CP C +V++A+++PIYG G K+ +S VP RP
Sbjct: 67 EPPKCPVCKSDVSEATLVPIYGRGQ-------KAPQSGSNVPSRP 104
>UNIPROTKB|F1N0B8 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071712 "ER-associated misfolded protein catabolic
process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 GeneTree:ENSGT00390000014107
OMA:FQSFGDT EMBL:DAAA02055357 IPI:IPI00699444 UniGene:Bt.1678
Ensembl:ENSBTAT00000035701 Uniprot:F1N0B8
Length = 180
Score = 207 (77.9 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 36/93 (38%), Positives = 54/93 (58%)
Query: 130 RAGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDAS 189
R G G F+CNICL+ AR+ V++ CGHL+CW C +Q +ECP C ++ +
Sbjct: 16 RERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREN 75
Query: 190 IIPIYGNGNSNDLQKLKSKESCLKVPPRPLARR 222
++P+YG G+ K ++ LK PPRP +R
Sbjct: 76 VVPLYGRGSQ------KPQDPRLKTPPRPQGQR 102
>UNIPROTKB|A4IFC2 [details] [associations]
symbol:RNF185 "RNF185 protein" species:9913 "Bos taurus"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000238304 KO:K10666 CTD:91445
eggNOG:NOG300581 GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495
OMA:LSKVFLW OrthoDB:EOG4R7VC8 EMBL:DAAA02045640 EMBL:BC134508
IPI:IPI00689680 RefSeq:NP_001077172.1 UniGene:Bt.26786
Ensembl:ENSBTAT00000003661 GeneID:524459 KEGG:bta:524459
InParanoid:A4IFC2 NextBio:20873969 Uniprot:A4IFC2
Length = 192
Score = 206 (77.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 40/96 (41%), Positives = 55/96 (57%)
Query: 131 AGAGGGE--FFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDA 188
AG GG+ F+CNICLD A+D V++ CGHLFCW C +Q N + CP C ++
Sbjct: 27 AGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRD 86
Query: 189 SIIPIYGNGNSNDLQKLKSKESCLKVPPRPLARRIE 224
+IP+YG G++ +E K PPRP +R E
Sbjct: 87 KVIPLYGRGSTGQQDP---RE---KTPPRPQGQRPE 116
>UNIPROTKB|E2QS10 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 KO:K10666 GeneTree:ENSGT00390000014107
CTD:6048 OMA:FQSFGDT EMBL:AAEX03008226 RefSeq:XP_532092.1
Ensembl:ENSCAFT00000001208 GeneID:474858 KEGG:cfa:474858
NextBio:20850802 Uniprot:E2QS10
Length = 180
Score = 206 (77.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 36/93 (38%), Positives = 53/93 (56%)
Query: 130 RAGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDAS 189
R G G F+CNICL+ AR+ V++ CGHL+CW C +Q +ECP C ++
Sbjct: 16 RERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREK 75
Query: 190 IIPIYGNGNSNDLQKLKSKESCLKVPPRPLARR 222
++P+YG G+ K ++ LK PPRP +R
Sbjct: 76 VVPLYGRGSQ------KPQDPRLKTPPRPQGQR 102
>UNIPROTKB|F1PCX5 [details] [associations]
symbol:RNF185 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10666 CTD:91445 GeneTree:ENSGT00390000014107
OMA:LSKVFLW EMBL:AAEX03014800 RefSeq:XP_852634.1
ProteinModelPortal:F1PCX5 Ensembl:ENSCAFT00000020620 GeneID:486362
KEGG:cfa:486362 Uniprot:F1PCX5
Length = 192
Score = 206 (77.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 40/96 (41%), Positives = 55/96 (57%)
Query: 131 AGAGGGE--FFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDA 188
AG GG+ F+CNICLD A+D V++ CGHLFCW C +Q N + CP C ++
Sbjct: 27 AGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRD 86
Query: 189 SIIPIYGNGNSNDLQKLKSKESCLKVPPRPLARRIE 224
+IP+YG G++ +E K PPRP +R E
Sbjct: 87 KVIPLYGRGSTGQQDP---RE---KTPPRPQGQRPE 116
>UNIPROTKB|E7EM95 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662884 EMBL:AL845464 EMBL:BX284686
EMBL:BX927239 EMBL:CR933878 EMBL:CR812478 EMBL:AL662830
HGNC:HGNC:10068 IPI:IPI00910392 SMR:E7EM95 Ensembl:ENST00000427134
Ensembl:ENST00000547812 Ensembl:ENST00000548239
Ensembl:ENST00000549150 Ensembl:ENST00000549680
Ensembl:ENST00000549803 Ensembl:ENST00000550243 Uniprot:E7EM95
Length = 182
Score = 206 (77.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 36/93 (38%), Positives = 53/93 (56%)
Query: 130 RAGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDAS 189
R G G F+CNICL+ AR+ V++ CGHL+CW C +Q +ECP C ++
Sbjct: 16 RERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREK 75
Query: 190 IIPIYGNGNSNDLQKLKSKESCLKVPPRPLARR 222
++P+YG G+ K ++ LK PPRP +R
Sbjct: 76 VVPLYGRGSQ------KPQDPRLKTPPRPQGQR 102
>UNIPROTKB|Q96GF1 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005741
GO:GO:0046872 GO:GO:0016874 EMBL:CH471095 GO:GO:0008270
GO:GO:0006914 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC002073 EMBL:AC005005 HOGENOM:HOG000238304
KO:K10666 CTD:91445 eggNOG:NOG300581 HOVERGEN:HBG054495 OMA:LSKVFLW
OrthoDB:EOG4R7VC8 EMBL:DQ296559 EMBL:DQ296561 EMBL:DQ296562
EMBL:DQ296565 EMBL:CR456349 EMBL:AK095947 EMBL:AK291236
EMBL:BC009504 EMBL:BC026040 EMBL:BC033166 EMBL:BC012817
EMBL:BC035684 IPI:IPI00182628 IPI:IPI00435433 RefSeq:NP_001129297.1
RefSeq:NP_689480.2 UniGene:Hs.517553 ProteinModelPortal:Q96GF1
SMR:Q96GF1 IntAct:Q96GF1 PhosphoSite:Q96GF1 DMDM:74751883
PRIDE:Q96GF1 DNASU:91445 Ensembl:ENST00000266252
Ensembl:ENST00000326132 Ensembl:ENST00000518626 GeneID:91445
KEGG:hsa:91445 UCSC:uc003akb.3 GeneCards:GC22P031556
HGNC:HGNC:26783 HPA:HPA048329 neXtProt:NX_Q96GF1
PharmGKB:PA142671056 InParanoid:Q96GF1 PhylomeDB:Q96GF1
ChiTaRS:RNF185 GenomeRNAi:91445 NextBio:77254 ArrayExpress:Q96GF1
Bgee:Q96GF1 CleanEx:HS_RNF185 Genevestigator:Q96GF1
GermOnline:ENSG00000138942 Uniprot:Q96GF1
Length = 192
Score = 206 (77.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 40/96 (41%), Positives = 55/96 (57%)
Query: 131 AGAGGGE--FFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDA 188
AG GG+ F+CNICLD A+D V++ CGHLFCW C +Q N + CP C ++
Sbjct: 27 AGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRD 86
Query: 189 SIIPIYGNGNSNDLQKLKSKESCLKVPPRPLARRIE 224
+IP+YG G++ +E K PPRP +R E
Sbjct: 87 KVIPLYGRGSTGQQDP---RE---KTPPRPQGQRPE 116
>UNIPROTKB|Q99942 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] [GO:0070936 "protein
K48-linked ubiquitination" evidence=IDA] [GO:0044257 "cellular
protein catabolic process" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IMP] [GO:0070534
"protein K63-linked ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0031966 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534 EMBL:AL662884
GO:GO:0071712 EMBL:U89336 EMBL:AL845464 EMBL:BX284686 EMBL:BX927239
EMBL:CR933878 EMBL:CR812478 EMBL:AL662830 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 HOVERGEN:HBG054495 EMBL:AB056869
EMBL:AJ243936 EMBL:AK311859 EMBL:BT007105 EMBL:BC004155
EMBL:BC111392 EMBL:BC119741 EMBL:BC119742 EMBL:BC127651
EMBL:BC127652 EMBL:BC148255 IPI:IPI00012608 RefSeq:NP_008844.1
UniGene:Hs.731774 ProteinModelPortal:Q99942 SMR:Q99942
DIP:DIP-29268N IntAct:Q99942 MINT:MINT-1032027 STRING:Q99942
PhosphoSite:Q99942 DMDM:74762702 PRIDE:Q99942 DNASU:6048
Ensembl:ENST00000375094 Ensembl:ENST00000413786
Ensembl:ENST00000432616 Ensembl:ENST00000445885
Ensembl:ENST00000449794 Ensembl:ENST00000453473
Ensembl:ENST00000456167 GeneID:6048 KEGG:hsa:6048 UCSC:uc003oaj.4
CTD:6048 GeneCards:GC06P032146 H-InvDB:HIX0034363 HGNC:HGNC:10068
HPA:CAB034107 MIM:602677 neXtProt:NX_Q99942 PharmGKB:PA34442
InParanoid:Q99942 OMA:FQSFGDT OrthoDB:EOG469QVX GenomeRNAi:6048
NextBio:23565 ArrayExpress:Q99942 Bgee:Q99942 CleanEx:HS_RNF5
Genevestigator:Q99942 GermOnline:ENSG00000204308 Uniprot:Q99942
Length = 180
Score = 206 (77.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 36/93 (38%), Positives = 53/93 (56%)
Query: 130 RAGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDAS 189
R G G F+CNICL+ AR+ V++ CGHL+CW C +Q +ECP C ++
Sbjct: 16 RERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREK 75
Query: 190 IIPIYGNGNSNDLQKLKSKESCLKVPPRPLARR 222
++P+YG G+ K ++ LK PPRP +R
Sbjct: 76 VVPLYGRGSQ------KPQDPRLKTPPRPQGQR 102
>UNIPROTKB|A5A8Y3 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071712 "ER-associated misfolded protein catabolic
process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 EMBL:AL773562 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 GeneTree:ENSGT00390000014107
HOVERGEN:HBG054495 CTD:6048 OMA:FQSFGDT OrthoDB:EOG469QVX
EMBL:CT954269 RefSeq:NP_001116696.1 UniGene:Ssc.1246
ProteinModelPortal:A5A8Y3 Ensembl:ENSSSCT00000001585
GeneID:100144528 KEGG:ssc:100144528 Uniprot:A5A8Y3
Length = 180
Score = 206 (77.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 36/93 (38%), Positives = 53/93 (56%)
Query: 130 RAGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDAS 189
R G G F+CNICL+ AR+ V++ CGHL+CW C +Q +ECP C ++
Sbjct: 16 RERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREK 75
Query: 190 IIPIYGNGNSNDLQKLKSKESCLKVPPRPLARR 222
++P+YG G+ K ++ LK PPRP +R
Sbjct: 76 VVPLYGRGSQ------KPQDPRLKTPPRPQGQR 102
>UNIPROTKB|F2Z4Y3 [details] [associations]
symbol:RNF185 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10666 CTD:91445 GeneTree:ENSGT00390000014107
OMA:LSKVFLW EMBL:CT573044 RefSeq:XP_001925859.1 UniGene:Ssc.80754
ProteinModelPortal:F2Z4Y3 SMR:F2Z4Y3 Ensembl:ENSSSCT00000010981
GeneID:100157569 KEGG:ssc:100157569 Uniprot:F2Z4Y3
Length = 192
Score = 206 (77.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 40/96 (41%), Positives = 55/96 (57%)
Query: 131 AGAGGGE--FFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDA 188
AG GG+ F+CNICLD A+D V++ CGHLFCW C +Q N + CP C ++
Sbjct: 27 AGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRD 86
Query: 189 SIIPIYGNGNSNDLQKLKSKESCLKVPPRPLARRIE 224
+IP+YG G++ +E K PPRP +R E
Sbjct: 87 KVIPLYGRGSTGQQDP---RE---KTPPRPQGQRPE 116
>FB|FBgn0030693 [details] [associations]
symbol:CG8974 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:COG5574 KO:K10666
GeneTree:ENSGT00390000014107 OrthoDB:EOG4QBZN7 EMBL:AY060297
RefSeq:NP_573076.1 RefSeq:NP_727896.1 RefSeq:NP_727897.1
RefSeq:NP_996448.1 RefSeq:NP_996449.1 UniGene:Dm.7984 SMR:Q9VXP1
STRING:Q9VXP1 EnsemblMetazoa:FBtr0074185 EnsemblMetazoa:FBtr0074186
EnsemblMetazoa:FBtr0074187 EnsemblMetazoa:FBtr0074188
EnsemblMetazoa:FBtr0074189 GeneID:32532 KEGG:dme:Dmel_CG8974
UCSC:CG8974-RA FlyBase:FBgn0030693 InParanoid:Q9VXP1 OMA:ENNDETS
GenomeRNAi:32532 NextBio:778955 Uniprot:Q9VXP1
Length = 277
Score = 203 (76.5 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 39/98 (39%), Positives = 53/98 (54%)
Query: 127 DTKRAGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVT 186
D ++ ++CNICLD A+D V++ CGHLFCW C +Q N K CP C V
Sbjct: 111 DKEKEHTADDSLYECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKAAVD 170
Query: 187 DASIIPIYGNGNSNDLQKLKSKESCLKVPPRPLARRIE 224
+IP+YG NS + ++K VPPRP +R E
Sbjct: 171 KDKVIPLYGR-NSTHQEDPRNK-----VPPRPAGQRTE 202
>MGI|MGI:1922078 [details] [associations]
symbol:Rnf185 "ring finger protein 185" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:1922078 Prosite:PS00518 GO:GO:0016021
GO:GO:0005741 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0006914 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000238304 KO:K10666 CTD:91445
eggNOG:NOG300581 GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495
OrthoDB:EOG4R7VC8 ChiTaRS:RNF185 EMBL:AK034108 EMBL:AK052436
EMBL:AK053358 EMBL:AK075756 EMBL:AK077638 EMBL:AK149640
EMBL:AK165895 EMBL:AK167455 EMBL:AK168904 EMBL:BC014812
IPI:IPI00329937 IPI:IPI00453942 RefSeq:NP_663330.2
UniGene:Mm.136973 ProteinModelPortal:Q91YT2 SMR:Q91YT2
PhosphoSite:Q91YT2 PRIDE:Q91YT2 Ensembl:ENSMUST00000064364
Ensembl:ENSMUST00000077078 GeneID:193670 KEGG:mmu:193670
UCSC:uc007hsv.1 InParanoid:Q91YT2 OMA:WIALIFM NextBio:371498
Bgee:Q91YT2 CleanEx:MM_RNF185 Genevestigator:Q91YT2
GermOnline:ENSMUSG00000020448 Uniprot:Q91YT2
Length = 192
Score = 202 (76.2 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 39/95 (41%), Positives = 54/95 (56%)
Query: 132 GAGGGE--FFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDAS 189
G GG+ F+CNICLD A+D V++ CGHLFCW C +Q N + CP C ++
Sbjct: 28 GESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDK 87
Query: 190 IIPIYGNGNSNDLQKLKSKESCLKVPPRPLARRIE 224
+IP+YG G++ +E K PPRP +R E
Sbjct: 88 VIPLYGRGSTGQQDP---RE---KTPPRPQGQRPE 116
>RGD|1564777 [details] [associations]
symbol:Rnf185 "ring finger protein 185" species:10116 "Rattus
norvegicus" [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 RGD:1564777
Prosite:PS00518 GO:GO:0016021 GO:GO:0005741 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0006914 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
HOGENOM:HOG000238304 KO:K10666 CTD:91445 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 OMA:LSKVFLW
OrthoDB:EOG4R7VC8 EMBL:BC092655 IPI:IPI00195276
RefSeq:NP_001019442.1 UniGene:Rn.7234 ProteinModelPortal:Q568Y3
PhosphoSite:Q568Y3 Ensembl:ENSRNOT00000026134 GeneID:360967
KEGG:rno:360967 UCSC:RGD:1564777 InParanoid:Q568Y3 NextBio:674743
Genevestigator:Q568Y3 GermOnline:ENSRNOG00000019325 Uniprot:Q568Y3
Length = 192
Score = 202 (76.2 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 39/95 (41%), Positives = 54/95 (56%)
Query: 132 GAGGGE--FFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDAS 189
G GG+ F+CNICLD A+D V++ CGHLFCW C +Q N + CP C ++
Sbjct: 28 GESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDK 87
Query: 190 IIPIYGNGNSNDLQKLKSKESCLKVPPRPLARRIE 224
+IP+YG G++ +E K PPRP +R E
Sbjct: 88 VIPLYGRGSTGQQDP---RE---KTPPRPQGQRPE 116
>MGI|MGI:1860076 [details] [associations]
symbol:Rnf5 "ring finger protein 5" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0044257 "cellular protein catabolic process"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0070936 "protein K48-linked ubiquitination" evidence=ISO]
[GO:0071712 "ER-associated misfolded protein catabolic process"
evidence=ISO] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 EMBL:AF030001 MGI:MGI:1860076 Prosite:PS00518
GO:GO:0016021 GO:GO:0005789 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534 GO:GO:0071712
HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 CTD:6048
OMA:FQSFGDT OrthoDB:EOG469QVX EMBL:BC016449 IPI:IPI00128461
PIR:T09063 RefSeq:NP_062276.1 UniGene:Mm.274542
ProteinModelPortal:O35445 SMR:O35445 MINT:MINT-1341225
STRING:O35445 PhosphoSite:O35445 PRIDE:O35445
Ensembl:ENSMUST00000015622 GeneID:54197 KEGG:mmu:54197
UCSC:uc008ccy.1 InParanoid:O35445 NextBio:311046 Bgee:O35445
CleanEx:MM_RNF5 Genevestigator:O35445 GermOnline:ENSMUSG00000015478
Uniprot:O35445
Length = 180
Score = 201 (75.8 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 35/93 (37%), Positives = 53/93 (56%)
Query: 130 RAGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDAS 189
R G F+CNICL+ AR+ V++ CGHL+CW C +Q + +ECP C ++
Sbjct: 16 RERGGASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREK 75
Query: 190 IIPIYGNGNSNDLQKLKSKESCLKVPPRPLARR 222
++P+YG G+ K ++ LK PPRP +R
Sbjct: 76 VVPLYGRGSQ------KPQDPRLKTPPRPQGQR 102
>RGD|1588458 [details] [associations]
symbol:Rnf5 "ring finger protein 5, E3 ubiquitin protein ligase"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0044257
"cellular protein catabolic process" evidence=ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA;ISO] [GO:0070936
"protein K48-linked ubiquitination" evidence=IEA;ISO] [GO:0071712
"ER-associated misfolded protein catabolic process"
evidence=IEA;ISO] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 RGD:1588458 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0031966 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534 GO:GO:0071712
HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 CTD:6048
OMA:FQSFGDT OrthoDB:EOG469QVX EMBL:BC088341 IPI:IPI00215379
RefSeq:NP_001102495.1 UniGene:Rn.136937 ProteinModelPortal:Q5M807
SMR:Q5M807 STRING:Q5M807 Ensembl:ENSRNOT00000000501 GeneID:407784
KEGG:rno:407784 UCSC:RGD:1588458 InParanoid:Q5M807 NextBio:696189
Genevestigator:Q5M807 GermOnline:ENSRNOG00000000438 Uniprot:Q5M807
Length = 180
Score = 201 (75.8 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 35/93 (37%), Positives = 53/93 (56%)
Query: 130 RAGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDAS 189
R G F+CNICL+ AR+ V++ CGHL+CW C +Q + +ECP C ++
Sbjct: 16 RERGGASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREK 75
Query: 190 IIPIYGNGNSNDLQKLKSKESCLKVPPRPLARR 222
++P+YG G+ K ++ LK PPRP +R
Sbjct: 76 VVPLYGRGSQ------KPQDPRLKTPPRPQGQR 102
>TAIR|locus:2124004 [details] [associations]
symbol:RMA3 "RING membrane-anchor 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005783 GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 EMBL:AL161571
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 HSSP:P38398 EMBL:AL078467 HOGENOM:HOG000238304
KO:K10666 EMBL:DQ059124 EMBL:BT002429 EMBL:BT006285 IPI:IPI00519289
PIR:T08939 RefSeq:NP_194477.2 UniGene:At.43903
ProteinModelPortal:Q8GUK7 SMR:Q8GUK7 PaxDb:Q8GUK7 PRIDE:Q8GUK7
EnsemblPlants:AT4G27470.1 GeneID:828856 KEGG:ath:AT4G27470
TAIR:At4g27470 eggNOG:NOG290580 InParanoid:Q8GUK7 OMA:FLCCIIL
PhylomeDB:Q8GUK7 ProtClustDB:CLSN2918206 Genevestigator:Q8GUK7
Uniprot:Q8GUK7
Length = 243
Score = 201 (75.8 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 45/112 (40%), Positives = 57/112 (50%)
Query: 118 IAKALGIHTDTKRAG-AGGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAY---- 172
IAK T AG A FDCNICLD A DPV+T CGHLFCW C Y+ +
Sbjct: 20 IAKQKPNLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSV 79
Query: 173 ---RNVKECPACNGEVTDASIIPIYGNGNSNDLQKLKSK-ESCLK--VPPRP 218
++ CP C +T S++P+YG G S+ SK + L +P RP
Sbjct: 80 SVDQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRP 131
>ZFIN|ZDB-GENE-040426-1977 [details] [associations]
symbol:rnf185 "ring finger protein 185"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-040426-1977
GO:GO:0016021 GO:GO:0005741 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006914 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HOGENOM:HOG000238304
KO:K10666 CTD:91445 eggNOG:NOG300581 GeneTree:ENSGT00390000014107
HOVERGEN:HBG054495 OrthoDB:EOG4R7VC8 EMBL:BC059445 IPI:IPI00506188
RefSeq:NP_998202.1 UniGene:Dr.11136 ProteinModelPortal:Q6PC78
Ensembl:ENSDART00000046781 GeneID:406310 KEGG:dre:406310
InParanoid:Q6PC78 NextBio:20817938 Bgee:Q6PC78 Uniprot:Q6PC78
Length = 194
Score = 201 (75.8 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 38/96 (39%), Positives = 55/96 (57%)
Query: 131 AGAGGGE--FFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDA 188
+G GG + F+CNICLD ++D V++ CGHLFCW C +Q N + CP C ++
Sbjct: 29 SGGGGAQDSTFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRD 88
Query: 189 SIIPIYGNGNSNDLQKLKSKESCLKVPPRPLARRIE 224
+IP+YG G++ +E K PPRP +R E
Sbjct: 89 KVIPLYGRGSTGQQDP---RE---KTPPRPQGQRPE 118
>WB|WBGene00004381 [details] [associations]
symbol:rnf-5 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0055120 "striated muscle dense body" evidence=IDA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0055002 "striated muscle cell
development" evidence=IMP] [GO:0030054 "cell junction"
evidence=IDA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0008340 GO:GO:0046872 GO:GO:0030054 GO:GO:0018996
GO:GO:0055120 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0042787 EMBL:Z46787
GO:GO:0055002 HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 PIR:T19328 RefSeq:NP_497830.1
ProteinModelPortal:Q09463 SMR:Q09463 IntAct:Q09463 STRING:Q09463
PaxDb:Q09463 EnsemblMetazoa:C16C10.7 GeneID:175532
KEGG:cel:CELE_C16C10.7 UCSC:C16C10.7 CTD:175532 WormBase:C16C10.7
InParanoid:Q09463 OMA:CNICLDA NextBio:888552 Uniprot:Q09463
Length = 235
Score = 199 (75.1 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 39/87 (44%), Positives = 51/87 (58%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNG- 197
F+CNICLD A+D V++ CGHLFCW C Q N + CP C + ++PIYG G
Sbjct: 24 FECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNKVVPIYGRGG 83
Query: 198 NSNDLQKLKSKESCLKVPPRPLARRIE 224
+S+D +K KVPPRP +R E
Sbjct: 84 DSSDPRK--------KVPPRPKGQRSE 102
>UNIPROTKB|Q09463 [details] [associations]
symbol:rnf-5 "RING finger protein 5" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0008340 GO:GO:0046872
GO:GO:0030054 GO:GO:0018996 GO:GO:0055120 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:Z46787 GO:GO:0055002
HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 PIR:T19328 RefSeq:NP_497830.1
ProteinModelPortal:Q09463 SMR:Q09463 IntAct:Q09463 STRING:Q09463
PaxDb:Q09463 EnsemblMetazoa:C16C10.7 GeneID:175532
KEGG:cel:CELE_C16C10.7 UCSC:C16C10.7 CTD:175532 WormBase:C16C10.7
InParanoid:Q09463 OMA:CNICLDA NextBio:888552 Uniprot:Q09463
Length = 235
Score = 199 (75.1 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 39/87 (44%), Positives = 51/87 (58%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNG- 197
F+CNICLD A+D V++ CGHLFCW C Q N + CP C + ++PIYG G
Sbjct: 24 FECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNKVVPIYGRGG 83
Query: 198 NSNDLQKLKSKESCLKVPPRPLARRIE 224
+S+D +K KVPPRP +R E
Sbjct: 84 DSSDPRK--------KVPPRPKGQRSE 102
>DICTYBASE|DDB_G0285333 [details] [associations]
symbol:DDB_G0285333 "RING finger protein 185"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0285333 Prosite:PS00518 GO:GO:0046872
EMBL:AAFI02000079 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:COG5574 KO:K10666
RefSeq:XP_638242.1 ProteinModelPortal:Q54ND8
EnsemblProtists:DDB0186444 GeneID:8625050 KEGG:ddi:DDB_G0285333
InParanoid:Q54ND8 OMA:CIFQWLQ Uniprot:Q54ND8
Length = 281
Score = 203 (76.5 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGN 198
F+CNIC D +PV+T CGHLFCW+C +Q + + ++CP C +T +IPIYG G
Sbjct: 71 FECNICFDDVSEPVVTQCGHLFCWTCIFQW-LQHNSSQQCPVCKAPITKEKLIPIYGRGG 129
Query: 199 SNDLQKLKSKESCLKVPPRP 218
S + + KS+ + P RP
Sbjct: 130 SGEDPRKKSQSIPQRPPGRP 149
>UNIPROTKB|F1NHH0 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014107
EMBL:AADN02043215 EMBL:AADN02043216 IPI:IPI00590225
Ensembl:ENSGALT00000011275 ArrayExpress:F1NHH0 Uniprot:F1NHH0
Length = 117
Score = 196 (74.1 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 36/86 (41%), Positives = 50/86 (58%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGN 198
F+CNICLD A+D V++ CGHLFCW C +Q N + CP C ++ +IP+YG G+
Sbjct: 2 FECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGS 61
Query: 199 SNDLQKLKSKESCLKVPPRPLARRIE 224
+ +E K PPRP +R E
Sbjct: 62 TGQQDP---RE---KTPPRPQGQRPE 81
>UNIPROTKB|Q5ZIR9 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005741 "mitochondrial outer membrane" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005741
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006914
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000238304 KO:K10666 EMBL:AJ720715
IPI:IPI00586277 RefSeq:NP_001007841.1 UniGene:Gga.4866
ProteinModelPortal:Q5ZIR9 Ensembl:ENSGALT00000011276 GeneID:416965
KEGG:gga:416965 CTD:91445 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 InParanoid:Q5ZIR9
OMA:LSKVFLW OrthoDB:EOG4R7VC8 NextBio:20820352 ArrayExpress:Q5ZIR9
Uniprot:Q5ZIR9
Length = 194
Score = 196 (74.1 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 36/86 (41%), Positives = 50/86 (58%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGN 198
F+CNICLD A+D V++ CGHLFCW C +Q N + CP C ++ +IP+YG G+
Sbjct: 39 FECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGS 98
Query: 199 SNDLQKLKSKESCLKVPPRPLARRIE 224
+ +E K PPRP +R E
Sbjct: 99 TGQQDP---RE---KTPPRPQGQRPE 118
>UNIPROTKB|Q6R567 [details] [associations]
symbol:RMA1H1 "E3 ubiquitin-protein ligase RMA1H1"
species:4072 "Capsicum annuum" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0006970 "response to osmotic stress"
evidence=IEP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0009611
GO:GO:0043161 GO:GO:0009723 GO:GO:0005789 GO:GO:0046872
GO:GO:0009409 GO:GO:0009414 GO:GO:0008270 GO:GO:0006970
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 EMBL:AY513612 ProteinModelPortal:Q6R567
Uniprot:Q6R567
Length = 252
Score = 196 (74.1 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 40/106 (37%), Positives = 58/106 (54%)
Query: 127 DTKRAGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVK---------E 177
D GG FDCNICLD +PV+T CGHL+CW C Y+ Y +++V +
Sbjct: 29 DEVEENISGG--FDCNICLDCVHEPVITLCGHLYCWPCIYKWIY-FQSVSSENSDQQQPQ 85
Query: 178 CPACNGEVTDASIIPIYGNGN-SNDLQKLKSKESCLKVPPRPLARR 222
CP C EV++ ++IP+YG G S + K+ + +P RP + R
Sbjct: 86 CPVCKAEVSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQRPPSPR 131
>FB|FBgn0052581 [details] [associations]
symbol:CG32581 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:COG5574 KO:K10666
GeneTree:ENSGT00390000014107 EMBL:BT082041 RefSeq:NP_001096988.2
RefSeq:NP_727898.2 UniGene:Dm.33538 SMR:Q8IR26 IntAct:Q8IR26
MINT:MINT-741955 STRING:Q8IR26 EnsemblMetazoa:FBtr0074184
EnsemblMetazoa:FBtr0113439 GeneID:318098 KEGG:dme:Dmel_CG32581
UCSC:CG32581-RA FlyBase:FBgn0052581 InParanoid:Q8IR26
OrthoDB:EOG4QBZN7 GenomeRNAi:318098 NextBio:844797 Uniprot:Q8IR26
Length = 283
Score = 203 (76.5 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 39/98 (39%), Positives = 53/98 (54%)
Query: 127 DTKRAGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVT 186
D ++ ++CNICLD A+D V++ CGHLFCW C +Q N K CP C V
Sbjct: 111 DKEKEHTADDSLYECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKAAVD 170
Query: 187 DASIIPIYGNGNSNDLQKLKSKESCLKVPPRPLARRIE 224
+IP+YG NS + ++K VPPRP +R E
Sbjct: 171 KDKVIPLYGR-NSTHQEDPRNK-----VPPRPAGQRTE 202
>TAIR|locus:2128746 [details] [associations]
symbol:RMA1 "RING membrane-anchor 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0032527
"protein exit from endoplasmic reticulum" evidence=IMP] [GO:0016020
"membrane" evidence=IDA] [GO:0032940 "secretion by cell"
evidence=IGI] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005783 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0032940 GO:GO:0016020
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 InterPro:IPR017907
HSSP:P38398 EMBL:AF071527 EMBL:AL161497 GO:GO:0032527 EMBL:AB008518
EMBL:BT003833 EMBL:BT005188 IPI:IPI00517108 PIR:T52142
RefSeq:NP_192260.1 RefSeq:NP_974506.1 UniGene:At.239
ProteinModelPortal:O64425 SMR:O64425 IntAct:O64425 STRING:O64425
PRIDE:O64425 EnsemblPlants:AT4G03510.1 EnsemblPlants:AT4G03510.2
GeneID:825654 KEGG:ath:AT4G03510 TAIR:At4g03510 eggNOG:NOG283810
HOGENOM:HOG000238304 InParanoid:O64425 KO:K10666 OMA:CKSKVSH
PhylomeDB:O64425 ProtClustDB:CLSN2685946 Genevestigator:O64425
Uniprot:O64425
Length = 249
Score = 188 (71.2 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 42/122 (34%), Positives = 68/122 (55%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQL----PYA----YRNVKECPACNGEVTDASI 190
FDCNICLD ++PV+T CGHLFCW C ++ ++ Y+ ++CP C +V+ +++
Sbjct: 46 FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTL 105
Query: 191 IPIYGNGNSNDLQKLKSKESCLKVPPRPLARRIESVRQQLVNRRPVSTPIEVRIQQ---F 247
+P+YG G ++ K+ VP RP+ R ++ N ST ++R+ Q F
Sbjct: 106 VPLYGRGRCTTQEEGKNS-----VPKRPVG---PVYRLEMPNSPYAST--DLRLSQRVHF 155
Query: 248 NS 249
NS
Sbjct: 156 NS 157
>UNIPROTKB|E9PN08 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX284686 HGNC:HGNC:10068 IPI:IPI00514241
ProteinModelPortal:E9PN08 SMR:E9PN08 Ensembl:ENST00000472060
ArrayExpress:E9PN08 Bgee:E9PN08 Uniprot:E9PN08
Length = 91
Score = 183 (69.5 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 130 RAGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDAS 189
R G G F+CNICL+ AR+ V++ CGHL+CW C +Q +ECP C ++
Sbjct: 16 RERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREK 75
Query: 190 IIPIYGNGN 198
++P+YG G+
Sbjct: 76 VVPLYGRGS 84
>FB|FBgn0052847 [details] [associations]
symbol:CG32847 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 EMBL:AE014296
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HSSP:P28990 GeneTree:ENSGT00390000014107
EMBL:BT044276 RefSeq:NP_730026.1 UniGene:Dm.34005 SMR:Q8IQM1
EnsemblMetazoa:FBtr0075639 GeneID:318245 KEGG:dme:Dmel_CG32847
UCSC:CG32847-RB FlyBase:FBgn0052847 InParanoid:Q8IQM1
OrthoDB:EOG43R24T GenomeRNAi:318245 NextBio:845309 Uniprot:Q8IQM1
Length = 164
Score = 181 (68.8 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 33/81 (40%), Positives = 47/81 (58%)
Query: 138 FFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNG 197
F++CNICLD A++ V++ CGHLFCW C YQ + CP C V + +IP+Y
Sbjct: 15 FYECNICLDTAQNAVVSMCGHLFCWPCLYQWILTKPDHTVCPVCKSGVDRSKVIPVYAR- 73
Query: 198 NSNDLQKLKSKESCLKVPPRP 218
ND ++ ++ K PPRP
Sbjct: 74 --NDKRQEDPRD---KTPPRP 89
>ASPGD|ASPL0000031841 [details] [associations]
symbol:AN5681 species:162425 "Emericella nidulans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005779 "integral
to peroxisomal membrane" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184
InterPro:IPR006845 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 EMBL:AACD01000098 EMBL:BN001305 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016558 InterPro:IPR017907 eggNOG:COG5574
KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757
HOGENOM:HOG000180194 OrthoDB:EOG44TSJ5 RefSeq:XP_663285.1
ProteinModelPortal:Q5B199 STRING:Q5B199
EnsemblFungi:CADANIAT00003384 GeneID:2871973 KEGG:ani:AN5681.2
Uniprot:Q5B199
Length = 373
Score = 134 (52.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 136 GEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYG 195
G+ C +CL+ +DP +T CGH+FCW+C R ECP C E+ + ++P+ G
Sbjct: 317 GQQRKCTLCLESFKDPSVTTCGHVFCWTCVCDW---VREKPECPLCRQELLASKVLPLRG 373
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 111 (44.1 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGNS- 199
C+ICLD RDPV CGH+FC SC + + CP C +I P++ +
Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPVWQLASLV 75
Query: 200 NDLQKLK 206
++++LK
Sbjct: 76 ENIERLK 82
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 109 (43.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGN 196
F C IC DM + +T CGH FC+ C +Q + + CP CN V D +I +Y N
Sbjct: 39 FVCPICFDMIEEAYMTKCGHSFCYKCIHQ---SLEDNNRCPKCN-YVVD-NIDHLYPN 91
>UNIPROTKB|Q5SPU2 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:AL844220 EMBL:BX927221
EMBL:CR759838 EMBL:CR788282 EMBL:BX248419 EMBL:CR388382
EMBL:BX927189 UniGene:Hs.720054 UniGene:Hs.731863 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00647769
SMR:Q5SPU2 Ensembl:ENST00000415789 Ensembl:ENST00000418026
Ensembl:ENST00000419171 Ensembl:ENST00000419401
Ensembl:ENST00000422881 Ensembl:ENST00000433361
Ensembl:ENST00000433836 Ensembl:ENST00000453442 UCSC:uc003npu.1
HOGENOM:HOG000120116 Uniprot:Q5SPU2
Length = 157
Score = 111 (44.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGNS- 199
C+ICLD RDPV CGH+FC SC + + CP C +I P++ +
Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPVWQLASLV 75
Query: 200 NDLQKLK 206
++++LK
Sbjct: 76 ENIERLK 82
>UNIPROTKB|G4NE71 [details] [associations]
symbol:MGG_00145 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089
SMART:SM00184 InterPro:IPR006845 Prosite:PS00518 EMBL:CM001235
GO:GO:0046872 GO:GO:0008270 GO:GO:0005779 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016558 InterPro:IPR017907 KO:K13346
PANTHER:PTHR23350 Pfam:PF04757 RefSeq:XP_003718984.1
EnsemblFungi:MGG_00145T0 GeneID:2675212 KEGG:mgr:MGG_00145
Uniprot:G4NE71
Length = 448
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPI 193
C +CL+ RDP T CGH+FCWSC R ECP C E I+P+
Sbjct: 393 CTLCLEGLRDPSATPCGHVFCWSCIGDW---VREKPECPLCRREALVQHILPL 442
>FB|FBgn0085337 [details] [associations]
symbol:CG34308 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 EMBL:AE014297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000014107 EMBL:BT029722
RefSeq:NP_001097770.1 UniGene:Dm.36040 SMR:A1A749
EnsemblMetazoa:FBtr0112504 GeneID:5740483 KEGG:dme:Dmel_CG34308
UCSC:CG34308-RA FlyBase:FBgn0085337 InParanoid:A1A749
NextBio:20891521 Uniprot:A1A749
Length = 108
Score = 102 (41.0 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 138 FFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPI 193
++ C +C+ A P ++ CGH FC C Y + + +CP C + + ++I I
Sbjct: 31 YYTCLVCMQTAESPRVSFCGHHFCSQCIYNWIRSQKYQAKCPYCQSLIGENTLITI 86
>UNIPROTKB|E7EQW4 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00947541
ProteinModelPortal:E7EQW4 SMR:E7EQW4 Ensembl:ENST00000476777
ArrayExpress:E7EQW4 Bgee:E7EQW4 Uniprot:E7EQW4
Length = 222
Score = 118 (46.6 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASI 190
+ +C ICL++ ++PV T C H+FC C +L + +CP C ++T S+
Sbjct: 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73
>UNIPROTKB|A2AE51 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:BX927221 EMBL:CR759838
EMBL:CR788282 EMBL:BX248419 EMBL:CR388382 EMBL:BX927189
HGNC:HGNC:12962 EMBL:AL662782 EMBL:AL671855 EMBL:AL845450
IPI:IPI00790584 SMR:A2AE51 Ensembl:ENST00000415966
Ensembl:ENST00000420345 Ensembl:ENST00000424124
Ensembl:ENST00000438064 Ensembl:ENST00000444979
Ensembl:ENST00000450103 Ensembl:ENST00000451189 Uniprot:A2AE51
Length = 159
Score = 110 (43.8 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 21/54 (38%), Positives = 28/54 (51%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIY 194
C+ICLD RDPV CGH+FC SC + + CP C +I P++
Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPVW 69
>UNIPROTKB|E1B7M2 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:DAAA02055413
IPI:IPI00717514 Ensembl:ENSBTAT00000005888 Uniprot:E1B7M2
Length = 341
Score = 121 (47.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 24/52 (46%), Positives = 29/52 (55%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIP 192
C ICLD+ +DP CGH FC SC Q A +V +CP CN V +I P
Sbjct: 16 CPICLDILQDPATIDCGHNFCLSCITQSGEAADSVLKCPLCNKIVKRDTITP 67
>ZFIN|ZDB-GENE-070912-225 [details] [associations]
symbol:ftr03 "finTRIM family, member 3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-070912-225 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:KOG2177 EMBL:BX572635 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 IPI:IPI00868407
Ensembl:ENSDART00000143094 OMA:ACEESIQ Uniprot:B0S723
Length = 276
Score = 119 (46.9 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCF--YQLPYAYRNVKECPACNGEVT 186
F+C+ICLD+ +DPV CGH +C SC Y +R V CP C T
Sbjct: 14 FNCSICLDLLKDPVAIPCGHSYCMSCISDYWDQDEWRGVYSCPQCRQTFT 63
>UNIPROTKB|E7EWN5 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00930098
ProteinModelPortal:E7EWN5 SMR:E7EWN5 Ensembl:ENST00000470026
ArrayExpress:E7EWN5 Bgee:E7EWN5 Uniprot:E7EWN5
Length = 649
Score = 118 (46.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASI 190
+ +C ICL++ ++PV T C H+FC C +L + +CP C ++T S+
Sbjct: 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73
Score = 49 (22.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 193 IYGNGNSNDLQKLKSKESCLKVPPRPLARRIESVRQQLVNRRPVSTPIEVRIQQFNS 249
I N N ++ L+ KES K P++ I ++ +L N P + R+++ +S
Sbjct: 562 IQNEKNPNPIESLE-KESAFKTKAEPISSSISNMELEL-NIHNSKAPKKNRLRRKSS 616
>UNIPROTKB|F1MK05 [details] [associations]
symbol:RNF170 "E3 ubiquitin-protein ligase RNF170"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:DAAA02060959 IPI:IPI00699368
UniGene:Bt.78246 Ensembl:ENSBTAT00000047188
GeneTree:ENSGT00390000017123 OMA:DMSCPVC InterPro:IPR010652
Pfam:PF06803 Uniprot:F1MK05
Length = 259
Score = 117 (46.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 30/88 (34%), Positives = 42/88 (47%)
Query: 124 IHTDTKRAGAGGGEFFD---CNICLDMARDPVLTCCGHLFCWSCF--YQLPYAYRNVKEC 178
+ T+ A +F+ C ICL A PV T CGHLFC +C Y ++ C
Sbjct: 68 LQTEQDAPAAARQQFYTDMYCPICLHQASLPVETNCGHLFCGTCIVAYWRYGSWLGAISC 127
Query: 179 PACNGEVTDASIIPIYG-NGNSNDLQKL 205
P C VT ++P++G N S D+ L
Sbjct: 128 PICRQTVT--LLLPVFGENDQSQDVVSL 153
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 338 SADVQAGSQSLDMATEIDSGVPRSASSVRTDVPT 371
S DV + Q + SG PRS D+PT
Sbjct: 147 SQDVVSLHQDISDYNRRFSGQPRSIMERIMDLPT 180
>TAIR|locus:2057780 [details] [associations]
symbol:PEX10 "peroxin 10" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009853 "photorespiration" evidence=IMP] [GO:0010381
"attachment of peroxisome to chloroplast" evidence=IMP] [GO:0006635
"fatty acid beta-oxidation" evidence=RCA;IMP] [GO:0016558 "protein
import into peroxisome matrix" evidence=RCA;IMP] InterPro:IPR001841
InterPro:IPR025654 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR006845 Prosite:PS00518 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0046872 GO:GO:0008270
GO:GO:0009793 GO:GO:0005779 GO:GO:0006635 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016558 GO:GO:0009853 InterPro:IPR017907
EMBL:AC002505 EMBL:AC004484 EMBL:AF119572 EMBL:AJ276134
EMBL:AK117879 EMBL:BT005340 EMBL:AY087109 IPI:IPI00538786
PIR:T00968 RefSeq:NP_565621.1 UniGene:At.22386
ProteinModelPortal:Q9SYU4 SMR:Q9SYU4 IntAct:Q9SYU4 STRING:Q9SYU4
TCDB:3.A.20.1.2 PaxDb:Q9SYU4 PRIDE:Q9SYU4 EnsemblPlants:AT2G26350.1
GeneID:817175 KEGG:ath:AT2G26350 GeneFarm:2449 TAIR:At2g26350
eggNOG:COG5574 HOGENOM:HOG000005805 InParanoid:Q9SYU4 KO:K13346
OMA:FRQRQRA PhylomeDB:Q9SYU4 ProtClustDB:CLSN2688445
Genevestigator:Q9SYU4 GermOnline:AT2G26350 GO:GO:0010381
PANTHER:PTHR23350 Pfam:PF04757 Uniprot:Q9SYU4
Length = 381
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVK-ECPACNGEVTDASIIPIY 194
C +CL + P T CGH+FCWSC + + N K ECP C T +S++ +Y
Sbjct: 327 CTLCLSTRQHPTATPCGHVFCWSCIME----WCNEKQECPLCRTPNTHSSLVCLY 377
>FB|FBgn0037384 [details] [associations]
symbol:dgrn "degringolade" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032183 "SUMO binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0033768 "SUMO-targeted ubiquitin ligase
complex" evidence=IC] [GO:0070201 "regulation of establishment of
protein localization" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0043393 "regulation of protein binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007530 "sex
determination" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IGI]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:AE014297 GO:GO:0005737 GO:GO:0045893
GO:GO:0022008 GO:GO:0046872 GO:GO:0008270 GO:GO:0043393
GO:GO:0009790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 HSSP:P38398 GO:GO:0007530 GO:GO:0070201
GO:GO:0033768 GeneTree:ENSGT00390000010318 UniGene:Dm.1077
GeneID:40725 KEGG:dme:Dmel_CG10981 CTD:40725 FlyBase:FBgn0037384
GenomeRNAi:40725 NextBio:820277 EMBL:AY060824 RefSeq:NP_649596.1
SMR:Q9VNJ0 IntAct:Q9VNJ0 MINT:MINT-766055 STRING:Q9VNJ0
EnsemblMetazoa:FBtr0078638 UCSC:CG10981-RA InParanoid:Q9VNJ0
OMA:IRATHKC Uniprot:Q9VNJ0
Length = 319
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 137 EFFDCNICLDMA--RDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIY 194
E + C IC+D R+PV T CGH+FC C + A R +CP CN ++T IY
Sbjct: 262 ELYKCPICMDSVSKREPVSTKCGHVFCREC---IETAIRATHKCPICNKKLTARQFFRIY 318
>UNIPROTKB|H0YH05 [details] [associations]
symbol:RNF10 "RING finger protein 10" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC063943 HGNC:HGNC:10055
ChiTaRS:RNF10 Ensembl:ENST00000541955 Uniprot:H0YH05
Length = 129
Score = 98 (39.6 bits), Expect = 0.00017, P = 0.00017
Identities = 25/85 (29%), Positives = 41/85 (48%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCF-YQLPYAYRNVKECPACNGEV--TDA-SIIPI--- 193
C ICL +T CGH+FCW+C + L + + +CP C V D S++
Sbjct: 18 CPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDLKSVVATESH 77
Query: 194 -YGNGNSNDLQKLKSKESCLKVPPR 217
Y G++ +Q +K ++ L P+
Sbjct: 78 QYVVGDTITMQLMKREKGVLVALPK 102
>UNIPROTKB|F1NQ64 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:AADN02034166 IPI:IPI00602963
Ensembl:ENSGALT00000007170 Uniprot:F1NQ64
Length = 717
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGN 198
F C IC DM + +T CGH FC+ C +Q + + CP CN V D +I +Y N
Sbjct: 120 FVCPICFDMIEEAYMTKCGHSFCYKCIHQ---SLEDNNRCPKCN-YVVD-NIDHLYPNFL 174
Query: 199 SNDL---QKLKSKESCLKV 214
N+L QK +S+E K+
Sbjct: 175 VNELILKQKQRSEEKRFKL 193
>UNIPROTKB|G3MWR7 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104499 EMBL:DAAA02055413 OMA:WEAELQG
Ensembl:ENSBTAT00000062975 Uniprot:G3MWR7
Length = 509
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 24/52 (46%), Positives = 29/52 (55%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIP 192
C ICLD+ +DP CGH FC SC Q A +V +CP CN V +I P
Sbjct: 16 CPICLDILQDPATIDCGHNFCLSCITQSGEAADSVLKCPLCNKIVKRDTITP 67
>UNIPROTKB|E7EN90 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007420 GO:GO:0032355 GO:GO:0005759
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0008270
GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000794 InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00945744 SMR:E7EN90
Ensembl:ENST00000461221 Ensembl:ENST00000461798 Uniprot:E7EN90
Length = 63
Score = 96 (38.9 bits), Expect = 0.00028, P = 0.00028
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECP 179
+ +C ICL++ ++PV T C H+FC C +L + +CP
Sbjct: 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCP 62
>DICTYBASE|DDB_G0282693 [details] [associations]
symbol:pex10 "peroxisome biogenesis factor 10"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0007031 "peroxisome organization"
evidence=IEA;ISS] [GO:0005779 "integral to peroxisomal membrane"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA;ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR001841
InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184 InterPro:IPR006845
dictyBase:DDB_G0282693 Prosite:PS00518 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0007031
GO:GO:0005779 GO:GO:0005778 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016558 InterPro:IPR017907 eggNOG:COG5574 KO:K13346
OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 RefSeq:XP_640208.2
ProteinModelPortal:Q54S31 EnsemblProtists:DDB0238052 GeneID:8623748
KEGG:ddi:DDB_G0282693 ProtClustDB:CLSZ2430477 Uniprot:Q54S31
Length = 374
Score = 117 (46.2 bits), Expect = 0.00031, P = 0.00031
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIY 194
C +CL++ T CGHLFCW C + N ++CP C ++ + +P+Y
Sbjct: 322 CTLCLEVRTHTTATICGHLFCWHCITEW---CNNKEQCPVCRCPISIRTCVPLY 372
>RGD|2218 [details] [associations]
symbol:Brca1 "breast cancer 1, early onset" species:10116 "Rattus
norvegicus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0001726 "ruffle" evidence=ISO] [GO:0003684 "damaged
DNA binding" evidence=ISO;TAS] [GO:0003723 "RNA binding"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO] [GO:0005694
"chromosome" evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006301 "postreplication
repair" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006349 "regulation of gene expression by genetic imprinting"
evidence=ISO] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007098 "centrosome cycle"
evidence=ISO] [GO:0007420 "brain development" evidence=IEP]
[GO:0007584 "response to nutrient" evidence=IEP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=ISO] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=ISO]
[GO:0010033 "response to organic substance" evidence=IEP] [GO:0010212
"response to ionizing radiation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=ISO] [GO:0031436 "BRCA1-BARD1 complex" evidence=ISO;ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0032355
"response to estradiol stimulus" evidence=IEP] [GO:0033993 "response
to lipid" evidence=IEP] [GO:0034446 "substrate adhesion-dependent
cell spreading" evidence=ISO] [GO:0035066 "positive regulation of
histone acetylation" evidence=ISO] [GO:0035067 "negative regulation
of histone acetylation" evidence=ISO] [GO:0043009 "chordate embryonic
development" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044030 "regulation of DNA methylation"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISO;ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051571 "positive regulation of histone
H3-K4 methylation" evidence=ISO] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=ISO] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=ISO] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=ISO]
[GO:0051865 "protein autoubiquitination" evidence=ISO;ISS]
[GO:0070512 "positive regulation of histone H4-K20 methylation"
evidence=ISO] [GO:0070531 "BRCA1-A complex" evidence=ISO] [GO:0071158
"positive regulation of cell cycle arrest" evidence=ISO] [GO:0071681
"cellular response to indole-3-methanol" evidence=ISO] [GO:0085020
"protein K6-linked ubiquitination" evidence=ISO;ISS] [GO:2000145
"regulation of cell motility" evidence=ISO] [GO:2000617 "positive
regulation of histone H3-K9 acetylation" evidence=ISO] [GO:2000620
"positive regulation of histone H4-K16 acetylation" evidence=ISO]
[GO:0005925 "focal adhesion" evidence=ISO] [GO:0031941 "filamentous
actin" evidence=ISO] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 RGD:2218
Prosite:PS00518 GO:GO:0005694 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0008270
GO:GO:0006281 GO:GO:0007584 GO:GO:0006633 GO:GO:0045717 GO:GO:0006310
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496
PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969 HOVERGEN:HBG050730
KO:K10605 OrthoDB:EOG42RD7C InterPro:IPR025994 Pfam:PF12820
GO:GO:0043009 GO:GO:0009048 EMBL:AF036760 EMBL:S82504 EMBL:S82502
EMBL:U60523 EMBL:S82500 IPI:IPI00202716 RefSeq:NP_036646.1
UniGene:Rn.217584 UniGene:Rn.48840 PDB:1L0B PDBsum:1L0B
ProteinModelPortal:O54952 SMR:O54952 STRING:O54952 PhosphoSite:O54952
PRIDE:O54952 GeneID:497672 KEGG:rno:497672 UCSC:RGD:2218
InParanoid:O54952 EvolutionaryTrace:O54952 NextBio:697729
Genevestigator:O54952 GermOnline:ENSRNOG00000020701 GO:GO:0007098
Uniprot:O54952
Length = 1817
Score = 121 (47.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASI 190
+ +C ICL++ ++PV T C H+FC C +L + +CP C E+T S+
Sbjct: 20 KILECPICLELIKEPVSTQCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSL 73
Score = 51 (23.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 17/75 (22%), Positives = 36/75 (48%)
Query: 311 EAYINSDNLRRNHQEFSH-----ADTDSVSLISADVQAGSQSLDMATEIDSGVPRSASSV 365
EA+++ L +H++ + +D + S+I V +G +S +E S +
Sbjct: 1294 EAFLSDKELISDHEDMAACLEEASDQEEDSIIPDSVASGYESEANLSEDCSQSDILTTQQ 1353
Query: 366 RTDVPTNIVRLQSEI 380
R + N+++LQ E+
Sbjct: 1354 RATMKDNLIKLQQEM 1368
>UNIPROTKB|G3V8S5 [details] [associations]
symbol:Brca1 "RCG34321, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IEA]
[GO:0007098 "centrosome cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035067 "negative
regulation of histone acetylation" evidence=IEA] [GO:0043009
"chordate embryonic development" evidence=IEA] [GO:0044030
"regulation of DNA methylation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051572
"negative regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IEA] [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0070512 "positive regulation of
histone H4-K20 methylation" evidence=IEA] [GO:2000617 "positive
regulation of histone H3-K9 acetylation" evidence=IEA] [GO:2000620
"positive regulation of histone H4-K16 acetylation" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 RGD:2218 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
EMBL:CH473948 InterPro:IPR017907 PANTHER:PTHR13763
InterPro:IPR025994 Pfam:PF12820 GeneTree:ENSGT00440000034289
OMA:CMLKLLN Ensembl:ENSRNOT00000028109 Uniprot:G3V8S5
Length = 1817
Score = 121 (47.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASI 190
+ +C ICL++ ++PV T C H+FC C +L + +CP C E+T S+
Sbjct: 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSL 73
Score = 51 (23.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 17/75 (22%), Positives = 36/75 (48%)
Query: 311 EAYINSDNLRRNHQEFSH-----ADTDSVSLISADVQAGSQSLDMATEIDSGVPRSASSV 365
EA+++ L +H++ + +D + S+I V +G +S +E S +
Sbjct: 1294 EAFLSDKELISDHEDMAACLEEASDQEEDSIIPDSVASGYESEANLSEDCSQSDILTTQQ 1353
Query: 366 RTDVPTNIVRLQSEI 380
R + N+++LQ E+
Sbjct: 1354 RATMKDNLIKLQQEM 1368
>ZFIN|ZDB-GENE-070912-318 [details] [associations]
symbol:ftr27 "finTRIM family, member 27"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-070912-318 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:KOG2177 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 EMBL:BX548047
IPI:IPI00862890 UniGene:Dr.88749 Ensembl:ENSDART00000135584
OMA:YESHEES Uniprot:B0S6S1
Length = 171
Score = 108 (43.1 bits), Expect = 0.00033, P = 0.00033
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYR---NVKECPACNGEVT 186
F C+ICLD+ +DPV CGH +C +C + Y R ++ CP C T
Sbjct: 13 FSCSICLDLLKDPVTIPCGHSYCMNCITE--YWNRRDLSINSCPQCRQTFT 61
>UNIPROTKB|Q3B891 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 UniGene:Hs.194143 HGNC:HGNC:1100 ChiTaRS:BRCA1
GO:GO:0043009 GO:GO:0009048 GO:GO:0007098 HOGENOM:HOG000142477
HOVERGEN:HBG061757 EMBL:BC106745 IPI:IPI00946108 SMR:Q3B891
STRING:Q3B891 Ensembl:ENST00000494123 Uniprot:Q3B891
Length = 473
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASI 190
+ +C ICL++ ++PV T C H+FC C +L + +CP C ++T S+
Sbjct: 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73
>UNIPROTKB|D6RBN4 [details] [associations]
symbol:TRIM23 "E3 ubiquitin-protein ligase TRIM23"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HGNC:HGNC:660 EMBL:AC008560
IPI:IPI00965267 ProteinModelPortal:D6RBN4 SMR:D6RBN4
Ensembl:ENST00000505205 ArrayExpress:D6RBN4 Bgee:D6RBN4
Uniprot:D6RBN4
Length = 126
Score = 95 (38.5 bits), Expect = 0.00036, P = 0.00036
Identities = 26/87 (29%), Positives = 41/87 (47%)
Query: 117 LIAKALGIHTDTKRAGAGGG---EFFDCNICLDMA-----RDPVLTCCGHLFCWSCFYQL 168
L+ LG D+ R G+ G + +C +C D+ + P L CGH C C +L
Sbjct: 4 LVVNKLGAGVDSGRQGSRGTAVVKVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRL 63
Query: 169 PYAYRNVKECPACNGEVTDASIIPIYG 195
P R ++ CP + +VTD ++G
Sbjct: 64 PLHGRAIR-CPF-DRQVTDLGDSGVWG 88
>UNIPROTKB|E5RI62 [details] [associations]
symbol:TRIM17 "E3 ubiquitin-protein ligase TRIM17"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL139288 EMBL:AL670729 HGNC:HGNC:13430
IPI:IPI00975887 ProteinModelPortal:E5RI62 SMR:E5RI62
Ensembl:ENST00000520264 ArrayExpress:E5RI62 Bgee:E5RI62
Uniprot:E5RI62
Length = 50
Score = 95 (38.5 bits), Expect = 0.00036, P = 0.00036
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPY 170
C+ICLD DPV+T CGH FC +C QL +
Sbjct: 16 CSICLDYFTDPVMTTCGHNFCRACI-QLSW 44
>UNIPROTKB|J3KSI2 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000578107
Uniprot:J3KSI2
Length = 108
Score = 95 (38.5 bits), Expect = 0.00036, P = 0.00036
Identities = 19/49 (38%), Positives = 25/49 (51%)
Query: 139 FDCNICLDMARDPV-LTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVT 186
F C +C ++ + PV T C H+FC CF L + CP C G VT
Sbjct: 16 FYCPVCQEVLKTPVRTTACQHVFCRKCF--LTAMRESGAHCPLCRGNVT 62
>UNIPROTKB|Q95153 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9615 "Canis lupus familiaris" [GO:0005694
"chromosome" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005694
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
GO:GO:0006633 GO:GO:0007049 GO:GO:0045717 GO:GO:0006310
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907 GO:GO:0051865
GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496 PANTHER:PTHR13763
CTD:672 HOGENOM:HOG000230969 HOVERGEN:HBG050730 KO:K10605
OrthoDB:EOG42RD7C InterPro:IPR025994 Pfam:PF12820 EMBL:U50709
RefSeq:NP_001013434.1 UniGene:Cfa.140 ProteinModelPortal:Q95153
SMR:Q95153 STRING:Q95153 GeneID:403437 KEGG:cfa:403437
InParanoid:Q95153 NextBio:20816955 Uniprot:Q95153
Length = 1878
Score = 118 (46.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASI 190
+ +C ICL++ ++PV T C H+FC C +L + +CP C ++T S+
Sbjct: 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLCKNDITKRSL 73
Score = 54 (24.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 198 NSNDLQKLKSKESCLKVPPRPLARRIESVRQQLVNRRPVSTPIEVRIQQFNSIVDAARH 256
N+N + L+ KES + P++ RI ++ +L N P + R+++ +S ARH
Sbjct: 565 NANPTESLE-KESAFRTKTEPMSSRISNMELEL-NSSSSKAPKKNRLRRKSS----ARH 617
>UNIPROTKB|F1PAI7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9615 "Canis lupus familiaris" [GO:2000620
"positive regulation of histone H4-K16 acetylation" evidence=IEA]
[GO:2000617 "positive regulation of histone H3-K9 acetylation"
evidence=IEA] [GO:0070512 "positive regulation of histone H4-K20
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=IEA] [GO:0051572
"negative regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0035067 "negative regulation of histone acetylation"
evidence=IEA] [GO:0009048 "dosage compensation by inactivation of X
chromosome" evidence=IEA] [GO:0007098 "centrosome cycle"
evidence=IEA] [GO:0006349 "regulation of gene expression by genetic
imprinting" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820
GeneTree:ENSGT00440000034289 OMA:CMLKLLN GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 EMBL:AAEX03006439 EMBL:AAEX03006438
Ensembl:ENSCAFT00000023190 Uniprot:F1PAI7
Length = 1882
Score = 118 (46.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASI 190
+ +C ICL++ ++PV T C H+FC C +L + +CP C ++T S+
Sbjct: 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGPSQCPLCKNDITKRSL 73
Score = 54 (24.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 198 NSNDLQKLKSKESCLKVPPRPLARRIESVRQQLVNRRPVSTPIEVRIQQFNSIVDAARH 256
N+N + L+ KES + P++ RI ++ +L N P + R+++ +S ARH
Sbjct: 566 NANPTESLE-KESAFRTKTEPMSSRISNMELEL-NSSSSKAPKKNRLRRKSS----ARH 618
>UNIPROTKB|F1S705 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104377
EMBL:CU638728 EMBL:CU855662 Ensembl:ENSSSCT00000016896
Uniprot:F1S705
Length = 425
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGN 198
F C IC DM + +T CGH FC+ C +Q + + CP CN V D +I +Y N
Sbjct: 133 FVCPICFDMIEEAYMTKCGHSFCYKCIHQ---SLEDNNRCPKCN-YVVD-NIDHLYPNFL 187
Query: 199 SNDLQKLKSKE 209
N+L LK K+
Sbjct: 188 VNELI-LKQKQ 197
>ZFIN|ZDB-GENE-070912-227 [details] [associations]
symbol:ftr05 "finTRIM family, member 5"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-070912-227 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:KOG2177 EMBL:BX572635 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 IPI:IPI00513408
Ensembl:ENSDART00000146444 OMA:ERTRCEV Uniprot:B0S721
Length = 292
Score = 114 (45.2 bits), Expect = 0.00042, P = 0.00042
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCF--YQLPYAYRNVKECPACNGEVTDASII 191
F+C+ICLD+ +DP CGH FC SC Y + V CP C T ++
Sbjct: 14 FNCSICLDLLKDPAAIPCGHSFCMSCISGYWDQDEQKGVYSCPQCRQTFTPRPVL 68
>UNIPROTKB|F1RZ52 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9823 "Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101808 OMA:YEDWETD EMBL:CU311184
Ensembl:ENSSSCT00000001341 Ensembl:ENSSSCT00000036524
Uniprot:F1RZ52
Length = 545
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGNS- 199
C+ICLD RDPV CGH+FC SC + CP C T +I P++ +
Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKENIRPVWQLASLV 75
Query: 200 NDLQKLK 206
++++LK
Sbjct: 76 ENIERLK 82
>UNIPROTKB|O77666 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 HOVERGEN:HBG001357 EMBL:AJ251829 CTD:7726
eggNOG:NOG291505 KO:K12008 OrthoDB:EOG42821H RefSeq:NP_001116681.1
UniGene:Ssc.54632 ProteinModelPortal:O77666 GeneID:100144460
KEGG:ssc:100144460 Uniprot:O77666
Length = 545
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGNS- 199
C+ICLD RDPV CGH+FC SC + CP C T +I P++ +
Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKENIRPVWQLASLV 75
Query: 200 NDLQKLK 206
++++LK
Sbjct: 76 ENIERLK 82
>ZFIN|ZDB-GENE-070424-55 [details] [associations]
symbol:ftr61 "finTRIM family, member 61"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070424-55 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG106862 EMBL:BC134866
IPI:IPI00760180 UniGene:Dr.90118 ProteinModelPortal:A4QN45
NextBio:20889962 Uniprot:A4QN45
Length = 548
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 25/59 (42%), Positives = 31/59 (52%)
Query: 131 AGAGGGEFFDCNICLDMARDPVLTCCGHLFCWSCF---YQLPYAYRNVKECPACNGEVT 186
A A + F C+ICLD+ +DPV+ CGH FC SC + L R V CP C T
Sbjct: 2 AEANQDQEFSCSICLDLLKDPVILSCGHRFCMSCITDCWNLEDQKR-VYSCPQCRQTFT 59
>UNIPROTKB|F1RWB5 [details] [associations]
symbol:F1RWB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104307 EMBL:FP067415
Ensembl:ENSSSCT00000009701 OMA:MEEVANQ Uniprot:F1RWB5
Length = 341
Score = 115 (45.5 bits), Expect = 0.00044, P = 0.00044
Identities = 23/50 (46%), Positives = 25/50 (50%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASI 190
C ICLD RDPV T CGH FC SC Q + CP C D S+
Sbjct: 16 CPICLDYLRDPVTTDCGHNFCHSCLLQRWEGLQGDFPCPVCLQHCPDRSL 65
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 119 (46.9 bits), Expect = 0.00044, P = 0.00044
Identities = 34/107 (31%), Positives = 48/107 (44%)
Query: 94 ECSINPQVRTIENVKTGKRGSSHLIAKALGIHTDTKRAGAGGGEF----FD----CNICL 145
E S +P V VK R SS + + H + G+GG E D C IC+
Sbjct: 3 EISTDPVVPA---VKPDPRTSS--VGEGANRH-ENDDGGSGGSEIGAPDLDKDLLCPICM 56
Query: 146 DMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIP 192
+ +D LT CGH FC+ C RN +CP C+ +T+ + P
Sbjct: 57 QIIKDAFLTACGHSFCYMCIIT---HLRNKSDCPCCSQHLTNNQLYP 100
>UNIPROTKB|E7EUM2 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00946315
ProteinModelPortal:E7EUM2 SMR:E7EUM2 Ensembl:ENST00000478531
UCSC:uc002idc.1 ArrayExpress:E7EUM2 Bgee:E7EUM2 Uniprot:E7EUM2
Length = 623
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASI 190
+ +C ICL++ ++PV T C H+FC C +L + +CP C ++T S+
Sbjct: 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73
>GENEDB_PFALCIPARUM|PF10_0127 [details] [associations]
symbol:PF10_0127 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001841 InterPro:IPR008974 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AE014185 SUPFAM:SSF49599
RefSeq:XP_001347412.2 ProteinModelPortal:Q8IJR5
EnsemblProtists:PF10_0127:mRNA GeneID:810285 KEGG:pfa:PF10_0127
EuPathDB:PlasmoDB:PF3D7_1013000 HOGENOM:HOG000283129
ProtClustDB:CLSZ2446623 Uniprot:Q8IJR5
Length = 520
Score = 117 (46.2 bits), Expect = 0.00052, P = 0.00052
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGN 196
E F C++CLD+ PV+T C H+ C+ C Y Y+ + + CP C + ++ I G
Sbjct: 26 ENFICSVCLDLCDTPVITLCNHICCYKCMY---YSLLHKRNCPICKQIIKHNNLKKITGK 82
Query: 197 GNSNDLQKLKSK 208
+ ++++ K
Sbjct: 83 -QKKEYEEIRIK 93
>UNIPROTKB|Q8IJR5 [details] [associations]
symbol:PF10_0127 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001841 InterPro:IPR008974 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AE014185 SUPFAM:SSF49599
RefSeq:XP_001347412.2 ProteinModelPortal:Q8IJR5
EnsemblProtists:PF10_0127:mRNA GeneID:810285 KEGG:pfa:PF10_0127
EuPathDB:PlasmoDB:PF3D7_1013000 HOGENOM:HOG000283129
ProtClustDB:CLSZ2446623 Uniprot:Q8IJR5
Length = 520
Score = 117 (46.2 bits), Expect = 0.00052, P = 0.00052
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGN 196
E F C++CLD+ PV+T C H+ C+ C Y Y+ + + CP C + ++ I G
Sbjct: 26 ENFICSVCLDLCDTPVITLCNHICCYKCMY---YSLLHKRNCPICKQIIKHNNLKKITGK 82
Query: 197 GNSNDLQKLKSK 208
+ ++++ K
Sbjct: 83 -QKKEYEEIRIK 93
>RGD|1359126 [details] [associations]
symbol:Trim26 "tripartite motif-containing 26" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 RGD:1359126 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:BX883051 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00690000101808 CTD:7726 eggNOG:NOG291505 KO:K12008
IPI:IPI00422036 RefSeq:NP_001011665.1 UniGene:Rn.163420
ProteinModelPortal:P62603 STRING:P62603 Ensembl:ENSRNOT00000001019
GeneID:309586 KEGG:rno:309586 UCSC:RGD:1359126 NextBio:661018
ArrayExpress:P62603 Genevestigator:P62603
GermOnline:ENSRNOG00000032930 Uniprot:P62603
Length = 542
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGNS- 199
C+ICLD RDPV CGH+FC SC + N CP C +I P++ +
Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCKKPFKKENIRPVWQLASLV 75
Query: 200 NDLQKLK 206
++++LK
Sbjct: 76 ENIERLK 82
>MGI|MGI:1337056 [details] [associations]
symbol:Trim26 "tripartite motif-containing 26" species:10090
"Mus musculus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 MGI:MGI:1337056 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:CH466559 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00690000101808 CTD:7726 eggNOG:NOG291505 KO:K12008
EMBL:AF230395 EMBL:AF230396 EMBL:CR956641 EMBL:BC037110
EMBL:AK042252 IPI:IPI00170374 IPI:IPI00454186 RefSeq:NP_001020770.2
UniGene:Mm.34587 ProteinModelPortal:Q99PN3 SMR:Q99PN3 STRING:Q99PN3
PhosphoSite:Q99PN3 PRIDE:Q99PN3 Ensembl:ENSMUST00000053434
Ensembl:ENSMUST00000123715 Ensembl:ENSMUST00000130367 GeneID:22670
KEGG:mmu:22670 InParanoid:Q99PN3 NextBio:303085 Bgee:Q99PN3
CleanEx:MM_TRIM26 Genevestigator:Q99PN3
GermOnline:ENSMUSG00000024457 Uniprot:Q99PN3
Length = 545
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGNS- 199
C+ICLD RDPV CGH+FC SC + N CP C +I P++ +
Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCKKPFKKENIRPVWQLASLV 75
Query: 200 NDLQKLK 206
++++LK
Sbjct: 76 ENIERLK 82
>FB|FBgn0038125 [details] [associations]
symbol:CG8141 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 EMBL:AE014297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 FlyBase:FBgn0038125 RefSeq:NP_731776.1
UniGene:Dm.12934 ProteinModelPortal:Q9VFY3 SMR:Q9VFY3 IntAct:Q9VFY3
MINT:MINT-290332 STRING:Q9VFY3 EnsemblMetazoa:FBtr0082734
GeneID:41622 KEGG:dme:Dmel_CG8141 UCSC:CG8141-RA InParanoid:Q9VFY3
OMA:GVITICG PhylomeDB:Q9VFY3 GenomeRNAi:41622 NextBio:824684
ArrayExpress:Q9VFY3 Bgee:Q9VFY3 Uniprot:Q9VFY3
Length = 239
Score = 111 (44.1 bits), Expect = 0.00057, P = 0.00057
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVK-ECPACNGEVTD-ASIIPIYGNG 197
CN C R V+T CGHLFCW+C + P + CP C + I+P +G G
Sbjct: 85 CNECNQYVRGGVITICGHLFCWTCLW--PKLSGTAQPRCPCCQRHLLMYEDIMPFHGEG 141
>UNIPROTKB|G3XAC3 [details] [associations]
symbol:BRCA1 "Breast cancer 1, early onset, isoform CRA_l"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357 Pfam:PF00533
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
UniGene:Hs.194143 HGNC:HGNC:1100 ChiTaRS:BRCA1
ProteinModelPortal:G3XAC3 SMR:G3XAC3 PRIDE:G3XAC3
Ensembl:ENST00000351666 ArrayExpress:G3XAC3 Bgee:G3XAC3
Uniprot:G3XAC3
Length = 680
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASI 190
+ +C ICL++ ++PV T C H+FC C +L + +CP C ++T S+
Sbjct: 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73
>UNIPROTKB|J3QRB8 [details] [associations]
symbol:RNF112 "RING finger protein 112" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC004448
HGNC:HGNC:12968 Ensembl:ENST00000575165 Uniprot:J3QRB8
Length = 123
Score = 93 (37.8 bits), Expect = 0.00060, P = 0.00060
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCF--YQLPYAYRNVKECPAC 181
C+ICL+ RDP+ CGH FC CF ++LP CP C
Sbjct: 57 CSICLERLRDPISLDCGHDFCIRCFSTHRLPGCEPPC--CPEC 97
>UNIPROTKB|K7GL56 [details] [associations]
symbol:LOC100517591 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00530000063064 EMBL:CU019565
Ensembl:ENSSSCT00000035939 Uniprot:K7GL56
Length = 206
Score = 109 (43.4 bits), Expect = 0.00062, P = 0.00062
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVK-ECPACNGEVTDASIIPIYGNG 197
FDC++CL++ PV T CGH+FC SC + + +N K CP C + +P G
Sbjct: 35 FDCSVCLEVLHHPVRTRCGHVFCRSC---IATSLKNNKWTCPYCR------AYLPSEGVP 85
Query: 198 NSNDLQKLKSK-ESC 211
++ +++KS+ ++C
Sbjct: 86 ATDVAKRMKSEFQNC 100
>UNIPROTKB|A2AE48 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:AL844220 EMBL:BX927221
EMBL:CR759838 EMBL:CR788282 EMBL:BX248419 EMBL:CR388382
EMBL:BX927189 UniGene:Hs.720054 UniGene:Hs.731863 HGNC:HGNC:12962
eggNOG:NOG291505 EMBL:AL662782 EMBL:AL671855 EMBL:AL845450
IPI:IPI00798036 SMR:A2AE48 Ensembl:ENST00000412755
Ensembl:ENST00000416596 Ensembl:ENST00000422802
Ensembl:ENST00000423901 Ensembl:ENST00000438785
Ensembl:ENST00000446196 Ensembl:ENST00000446540
Ensembl:ENST00000449136 HOGENOM:HOG000088612 Uniprot:A2AE48
Length = 248
Score = 111 (44.1 bits), Expect = 0.00063, P = 0.00063
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGNS- 199
C+ICLD RDPV CGH+FC SC + + CP C +I P++ +
Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPVWQLASLV 75
Query: 200 NDLQKLK 206
++++LK
Sbjct: 76 ENIERLK 82
>UNIPROTKB|E2RRJ5 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 OMA:PICFEMI
CTD:64326 GeneTree:ENSGT00700000104377 EMBL:AAEX03005193
EMBL:AAEX03005194 RefSeq:XP_537181.2 ProteinModelPortal:E2RRJ5
Ensembl:ENSCAFT00000022674 GeneID:480060 KEGG:cfa:480060
Uniprot:E2RRJ5
Length = 733
Score = 118 (46.6 bits), Expect = 0.00064, P = 0.00064
Identities = 29/76 (38%), Positives = 39/76 (51%)
Query: 134 GGGEFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPI 193
G F C IC DM + +T CGH FC+ C +Q + + CP CN V D +I +
Sbjct: 131 GKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQ---SLEDNNRCPKCN-YVVD-NIDHL 185
Query: 194 YGNGNSNDLQKLKSKE 209
Y N N+L LK K+
Sbjct: 186 YPNFLVNELI-LKQKQ 200
>UNIPROTKB|E7ETR2 [details] [associations]
symbol:BRCA1 "Breast cancer 1, early onset, isoform CRA_d"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357 Pfam:PF00533
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 CTD:672 KO:K10605
EMBL:AC060780 EMBL:AC135721 IPI:IPI00027277 RefSeq:NP_009229.2
UniGene:Hs.194143 GeneID:672 KEGG:hsa:672 HGNC:HGNC:1100
ChiTaRS:BRCA1 GenomeRNAi:672 SMR:E7ETR2 Ensembl:ENST00000491747
Uniprot:E7ETR2
Length = 759
Score = 118 (46.6 bits), Expect = 0.00067, P = 0.00067
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASI 190
+ +C ICL++ ++PV T C H+FC C +L + +CP C ++T S+
Sbjct: 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73
>UNIPROTKB|F1RWB4 [details] [associations]
symbol:LOC100737099 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 EMBL:CU693419
Ensembl:ENSSSCT00000009702 OMA:KISGHES Uniprot:F1RWB4
Length = 440
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00067
Identities = 23/50 (46%), Positives = 25/50 (50%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASI 190
C ICLD RDPV T CGH FC SC Q + CP C D S+
Sbjct: 13 CPICLDYLRDPVTTDCGHNFCHSCLLQRWEGLQGDFPCPVCLQHCPDRSL 62
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 92 (37.4 bits), Expect = 0.00077, P = 0.00077
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 141 CNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKE---CPAC 181
C ICL+ +DPV CGH FC SC L +++++ + CP C
Sbjct: 16 CPICLEYLKDPVTINCGHNFCRSC---LSVSWKDLDDTFPCPVC 56
>UNIPROTKB|Q8NHY2 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005813
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0006977
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 eggNOG:COG2319 EMBL:CH471067 GO:GO:0005925
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
EMBL:AF508940 EMBL:BK000438 EMBL:AF527539 EMBL:AY509921
EMBL:AK025789 EMBL:AK314750 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 EMBL:BC094728 IPI:IPI00171771
IPI:IPI00184865 IPI:IPI00431955 RefSeq:NP_001001740.1
RefSeq:NP_071902.2 UniGene:Hs.523744 ProteinModelPortal:Q8NHY2
SMR:Q8NHY2 IntAct:Q8NHY2 MINT:MINT-260162 STRING:Q8NHY2
PhosphoSite:Q8NHY2 DMDM:55976539 PaxDb:Q8NHY2 PRIDE:Q8NHY2
DNASU:64326 Ensembl:ENST00000308769 Ensembl:ENST00000367669
GeneID:64326 KEGG:hsa:64326 UCSC:uc001gku.1 UCSC:uc001gkv.1
UCSC:uc009wwv.2 CTD:64326 GeneCards:GC01M175913 HGNC:HGNC:17440
HPA:HPA028197 MIM:608067 neXtProt:NX_Q8NHY2 PharmGKB:PA134952161
HOVERGEN:HBG054995 InParanoid:Q8NHY2 OrthoDB:EOG4M0F18
ChiTaRS:RFWD2 GenomeRNAi:64326 NextBio:66247 ArrayExpress:Q8NHY2
Bgee:Q8NHY2 CleanEx:HS_RFWD2 Genevestigator:Q8NHY2
GermOnline:ENSG00000143207 Uniprot:Q8NHY2
Length = 731
Score = 117 (46.2 bits), Expect = 0.00082, P = 0.00082
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGN 198
F C IC DM + +T CGH FC+ C +Q + + CP CN V D +I +Y N
Sbjct: 134 FVCPICFDMIEEAYMTKCGHSFCYKCIHQ---SLEDNNRCPKCN-YVVD-NIDHLYPNFL 188
Query: 199 SNDLQKLKSKE 209
N+L LK K+
Sbjct: 189 VNELI-LKQKQ 198
>MGI|MGI:104537 [details] [associations]
symbol:Brca1 "breast cancer 1" species:10090 "Mus musculus"
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005694 "chromosome" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005759 "mitochondrial
matrix" evidence=ISO] [GO:0005813 "centrosome" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006260 "DNA
replication" evidence=IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006301 "postreplication repair" evidence=ISO] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IMP] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006631 "fatty acid metabolic
process" evidence=IEA] [GO:0006633 "fatty acid biosynthetic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=ISO] [GO:0007098
"centrosome cycle" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=ISO] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IDA]
[GO:0010212 "response to ionizing radiation" evidence=ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=ISO] [GO:0031436 "BRCA1-BARD1 complex" evidence=ISO]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0035066 "positive regulation of histone acetylation"
evidence=ISO;IMP] [GO:0035067 "negative regulation of histone
acetylation" evidence=IMP] [GO:0043009 "chordate embryonic
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045717 "negative regulation of
fatty acid biosynthetic process" evidence=ISO] [GO:0045739
"positive regulation of DNA repair" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051298 "centrosome duplication"
evidence=TAS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO;IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=ISO;IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0070512 "positive regulation of histone H4-K20
methylation" evidence=ISO;IMP] [GO:0070531 "BRCA1-A complex"
evidence=ISO] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=ISO] [GO:0071681 "cellular response to
indole-3-methanol" evidence=ISO] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISO] [GO:2000145 "regulation of cell
motility" evidence=ISO] [GO:2000617 "positive regulation of histone
H3-K9 acetylation" evidence=ISO;IMP] [GO:2000620 "positive
regulation of histone H4-K16 acetylation" evidence=ISO;IMP]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 MGI:MGI:104537 Pfam:PF00533 Prosite:PS00518
GO:GO:0005737 GO:GO:0005813 GO:GO:0008630 GO:GO:0005654
GO:GO:0051298 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0045944 GO:GO:0006633
GO:GO:0003723 GO:GO:0044212 GO:GO:0045717 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0006310
GO:GO:0030529 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794
GO:GO:0004842 GO:GO:0006349 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 GO:GO:0051865
Reactome:REACT_27235 GO:GO:0031436 GO:GO:0085020 GO:GO:0051572
eggNOG:NOG274496 PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969
HOVERGEN:HBG050730 KO:K10605 OrthoDB:EOG42RD7C InterPro:IPR025994
Pfam:PF12820 GO:GO:0051573 GO:GO:0051571 GO:GO:2000617
GO:GO:2000620 GO:GO:0070512 EMBL:U31625 EMBL:U35641 EMBL:U32446
EMBL:U36475 EMBL:AL590996 EMBL:U33835 IPI:IPI00331711
IPI:IPI00421063 PIR:I49350 RefSeq:NP_033894.3 UniGene:Mm.244975
ProteinModelPortal:P48754 DIP:DIP-41981N STRING:P48754
PhosphoSite:P48754 PRIDE:P48754 Ensembl:ENSMUST00000017290
GeneID:12189 KEGG:mmu:12189 GeneTree:ENSGT00440000034289
InParanoid:P48754 OMA:CMLKLLN NextBio:280581 CleanEx:MM_BRCA1
Genevestigator:P48754 GermOnline:ENSMUSG00000017146 GO:GO:0043009
GO:GO:0009048 GO:GO:0035067 GO:GO:0051574 GO:GO:0044030
Uniprot:P48754
Length = 1812
Score = 121 (47.7 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASI 190
+ +C ICL++ ++PV T C H+FC C +L + +CP C E+T S+
Sbjct: 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSL 73
Score = 47 (21.6 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 20/92 (21%), Positives = 41/92 (44%)
Query: 308 GDLEAYINSDNLRRNHQEFSHA-----DTDSVSLISADVQAGSQSLDMATEIDSGVPRSA 362
G+ EA+++ L +++E + D + S+I +G +S +E S
Sbjct: 1290 GNEEAFLSDKELISDNEEMATCLEEDNDQEEDSIIPDSEASGYESETNLSEDCSQSDILT 1349
Query: 363 SSVRTDVPTNIVRLQSEIR--DTAMEVNLNAP 392
+ R + N+++LQ E+ + +E N P
Sbjct: 1350 TQQRATMKYNLIKLQQEMAHLEAVLEQRGNQP 1381
>MGI|MGI:1347046 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1347046
Prosite:PS00518 GO:GO:0005737 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0016874 GO:GO:0016607 GO:GO:0008270 eggNOG:COG2319
GO:GO:0005925 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
CTD:64326 HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 ChiTaRS:RFWD2
EMBL:AF151110 EMBL:BC082804 IPI:IPI00621828 RefSeq:NP_036061.1
UniGene:Mm.328135 ProteinModelPortal:Q9R1A8 SMR:Q9R1A8
STRING:Q9R1A8 PhosphoSite:Q9R1A8 PaxDb:Q9R1A8 PRIDE:Q9R1A8
Ensembl:ENSMUST00000076894 GeneID:26374 KEGG:mmu:26374
UCSC:uc007ddz.1 GeneTree:ENSGT00700000104377 InParanoid:Q9R1A8
NextBio:304277 Bgee:Q9R1A8 CleanEx:MM_RFWD2 Genevestigator:Q9R1A8
GermOnline:ENSMUSG00000048949 Uniprot:Q9R1A8
Length = 733
Score = 117 (46.2 bits), Expect = 0.00082, P = 0.00082
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGN 198
F C IC DM + +T CGH FC+ C +Q + + CP CN V D +I +Y N
Sbjct: 136 FVCPICFDMIEEAYMTKCGHSFCYKCIHQ---SLEDNNRCPKCN-YVVD-NIDHLYPNFL 190
Query: 199 SNDLQKLKSKE 209
N+L LK K+
Sbjct: 191 VNELI-LKQKQ 200
>UNIPROTKB|F1MHX1 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:DAAA02043390 EMBL:DAAA02043391
EMBL:DAAA02043392 IPI:IPI00841834 UniGene:Bt.7449
Ensembl:ENSBTAT00000044452 ArrayExpress:F1MHX1 Uniprot:F1MHX1
Length = 735
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00082
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASIIPIYGNGN 198
F C IC DM + +T CGH FC+ C +Q + + CP CN V D +I +Y N
Sbjct: 138 FVCPICFDMIEEAYMTKCGHSFCYKCIHQ---SLEDNNRCPKCN-YVVD-NIDHLYPNFL 192
Query: 199 SNDLQKLKSKE 209
N+L LK K+
Sbjct: 193 VNELI-LKQKQ 202
>UNIPROTKB|F8W8H7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 InterPro:IPR025994
Pfam:PF12820 EMBL:AC060780 EMBL:AC135721 HGNC:HGNC:1100
ChiTaRS:BRCA1 IPI:IPI00930098 ProteinModelPortal:F8W8H7 SMR:F8W8H7
PRIDE:F8W8H7 Ensembl:ENST00000354071 ArrayExpress:F8W8H7
Bgee:F8W8H7 Uniprot:F8W8H7
Length = 1598
Score = 118 (46.6 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASI 190
+ +C ICL++ ++PV T C H+FC C +L + +CP C ++T S+
Sbjct: 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73
Score = 49 (22.3 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 193 IYGNGNSNDLQKLKSKESCLKVPPRPLARRIESVRQQLVNRRPVSTPIEVRIQQFNS 249
I N N ++ L+ KES K P++ I ++ +L N P + R+++ +S
Sbjct: 562 IQNEKNPNPIESLE-KESAFKTKAEPISSSISNMELEL-NIHNSKAPKKNRLRRKSS 616
>UNIPROTKB|E7EMP0 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 InterPro:IPR025994
Pfam:PF12820 EMBL:AC060780 EMBL:AC135721 HGNC:HGNC:1100
ChiTaRS:BRCA1 IPI:IPI00930496 ProteinModelPortal:E7EMP0 SMR:E7EMP0
PRIDE:E7EMP0 Ensembl:ENST00000346315 ArrayExpress:E7EMP0
Bgee:E7EMP0 Uniprot:E7EMP0
Length = 1624
Score = 118 (46.6 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 137 EFFDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVKECPACNGEVTDASI 190
+ +C ICL++ ++PV T C H+FC C +L + +CP C ++T S+
Sbjct: 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73
Score = 49 (22.3 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 193 IYGNGNSNDLQKLKSKESCLKVPPRPLARRIESVRQQLVNRRPVSTPIEVRIQQFNS 249
I N N ++ L+ KES K P++ I ++ +L N P + R+++ +S
Sbjct: 562 IQNEKNPNPIESLE-KESAFKTKAEPISSSISNMELEL-NIHNSKAPKKNRLRRKSS 616
>UNIPROTKB|F1SAL7 [details] [associations]
symbol:LOC100517591 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GeneTree:ENSGT00530000063064
KO:K12170 OMA:RTRCGHV EMBL:CU019565 RefSeq:XP_003127936.2
Ensembl:ENSSSCT00000004129 GeneID:100517591 KEGG:ssc:100517591
Uniprot:F1SAL7
Length = 232
Score = 109 (43.4 bits), Expect = 0.00091, P = 0.00090
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 139 FDCNICLDMARDPVLTCCGHLFCWSCFYQLPYAYRNVK-ECPACNGEVTDASIIPIYGNG 197
FDC++CL++ PV T CGH+FC SC + + +N K CP C + +P G
Sbjct: 35 FDCSVCLEVLHHPVRTRCGHVFCRSC---IATSLKNNKWTCPYCR------AYLPSEGVP 85
Query: 198 NSNDLQKLKSK-ESC 211
++ +++KS+ ++C
Sbjct: 86 ATDVAKRMKSEFQNC 100
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 423 321 0.00085 116 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 89
No. of states in DFA: 601 (64 KB)
Total size of DFA: 203 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.51u 0.10s 24.61t Elapsed: 00:00:01
Total cpu time: 24.52u 0.10s 24.62t Elapsed: 00:00:01
Start: Sat May 11 03:31:56 2013 End: Sat May 11 03:31:57 2013