Your job contains 1 sequence.
>039491
MNRIQATNELAFRVGFSGHSGHLRVEPLYTVEDRTDPIKSLPDFILPPAFPRETAESIKE
HIEDKYLSMGLDTNEFSPEKVGRQWDFDWFEMAKVPLEPSLAQSVVAPVWEVPFRRQTKQ
GKWEPNSVDVSELMLGAQDSGPLPRVAGPAKDFVRGSINSRPFRPGGLEDSQSLERILPD
GASNGEWVQEILKGGPAQVVPPSFKQGLDLGELQAYPCLWNVYKDQDQSSLKSTSDEKLN
ELSVQFDDLFKKAWEEDVAEFEKDDWLPNRIKIMLYWRLHPFGNMQHKLKRKKVLFACGF
LVYNYFSSYQSCYLGPQLEPESIDSDAEGKTTVGFNSVKEADLSVLDEILSVKSGGTTSI
LDDGGGQQQKEAWVVSGSTEAIADRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFV
AAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFSGKFDVGLLTGDVSLRP
EASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIV
LLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGEFYKVCENEAFIPQGW
KAAKDAYKRKNLSAASGATGSYAGASSPRDGARAQKREHPNRGKQNKHSVVGIKNSGGSQ
NNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIR
VFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFS
TETFAMGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRD
EIPGESDLKHIIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPE
QQQLLMRKLAQPPKTIECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAHQFLMPGRVL
FVKSQTGQDHLLGAVVKAPSANNKEYIVMLLKPDLPSASETSLDKKSGDFSEGYFVIPKS
KRGLEEEYCGSVSHRKGSGVINIKLPYHGAAAGVSYEVRGIDKKELLCICNCKIKIDQVG
LLEDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAA
NKCHGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDAD
LVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPK
LSVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELT
DVPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYITGV
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039491
(1379 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2075566 - symbol:AT3G46960 species:3702 "Arabi... 4099 0. 2
DICTYBASE|DDB_G0277211 - symbol:DDB_G0277211 "superkiller... 1395 4.1e-228 3
UNIPROTKB|Q15477 - symbol:SKIV2L "Helicase SKI2W" species... 1288 1.9e-219 3
RGD|1303059 - symbol:Skiv2l "superkiller viralicidic acti... 1294 2.4e-219 3
UNIPROTKB|F1LP39 - symbol:Skiv2l "Protein Skiv2l" species... 1294 5.0e-219 3
POMBASE|SPCC550.03c - symbol:SPCC550.03c "Ski complex RNA... 1512 1.3e-218 3
UNIPROTKB|F1RQW4 - symbol:SKIV2L "Uncharacterized protein... 1286 1.3e-218 3
UNIPROTKB|E1BMS0 - symbol:LOC100139548 "Uncharacterized p... 1290 1.7e-218 3
ASPGD|ASPL0000004985 - symbol:AN6007 species:162425 "Emer... 886 5.2e-218 4
UNIPROTKB|E2RSD6 - symbol:SKIV2L "Uncharacterized protein... 1263 9.3e-216 3
UNIPROTKB|B4DM01 - symbol:SKIV2L "cDNA FLJ57529, highly s... 1288 5.1e-215 3
UNIPROTKB|F8VNU1 - symbol:SKIV2L "Helicase SKI2W" species... 1288 5.1e-215 3
UNIPROTKB|F5H7B0 - symbol:SKIV2L "Helicase SKI2W" species... 1288 3.1e-212 2
UNIPROTKB|F8VS23 - symbol:SKIV2L "Helicase SKI2W" species... 1288 3.1e-212 2
CGD|CAL0002171 - symbol:orf19.6425 species:5476 "Candida ... 1522 2.2e-210 3
SGD|S000004390 - symbol:SKI2 "Ski complex component and p... 1443 2.4e-198 3
WB|WBGene00008502 - symbol:skih-2 species:6239 "Caenorhab... 1777 5.2e-186 2
FB|FBgn0039117 - symbol:tst "twister" species:7227 "Droso... 1028 7.7e-185 3
ZFIN|ZDB-GENE-010430-5 - symbol:skiv2l "superkiller viral... 885 1.9e-164 2
SGD|S000003586 - symbol:MTR4 "ATP-dependent 3'-5' RNA hel... 593 6.8e-156 3
UNIPROTKB|F5H7E2 - symbol:SKIV2L2 "Superkiller viralicidi... 597 1.4e-153 3
UNIPROTKB|P42285 - symbol:SKIV2L2 "Superkiller viralicidi... 597 7.9e-153 3
UNIPROTKB|E2RCI5 - symbol:SKIV2L2 "Uncharacterized protei... 596 8.2e-153 3
MGI|MGI:1919448 - symbol:Skiv2l2 "superkiller viralicidic... 592 9.9e-152 3
UNIPROTKB|F1SLL6 - symbol:SKIV2L2 "Uncharacterized protei... 597 1.9e-151 3
ZFIN|ZDB-GENE-040426-2854 - symbol:skiv2l2 "superkiller v... 590 4.1e-151 3
TAIR|locus:2026001 - symbol:MTR4 "homolog of yeast MTR4" ... 628 5.5e-147 3
TAIR|locus:2063648 - symbol:HEN2 "hua enhancer 2" species... 573 7.1e-144 3
FB|FBgn0001986 - symbol:l(2)35Df "lethal (2) 35Df" specie... 581 4.1e-143 3
WB|WBGene00012342 - symbol:mtr-4 species:6239 "Caenorhabd... 589 5.6e-142 3
UNIPROTKB|G4NH56 - symbol:MGG_03931 "FRQ-interacting RNA ... 570 1.8e-141 4
CGD|CAL0003794 - symbol:orf19.1335 species:5476 "Candida ... 576 6.0e-141 3
DICTYBASE|DDB_G0275633 - symbol:DDB_G0275633 "superkiller... 574 2.2e-139 3
POMBASE|SPAC17H9.02 - symbol:SPAC17H9.02 "TRAMP complex A... 578 9.9e-136 3
UNIPROTKB|F5H6Y7 - symbol:SKIV2L "Helicase SKI2W" species... 1288 2.4e-131 1
UNIPROTKB|F1MJX4 - symbol:SKIV2L2 "Uncharacterized protei... 597 8.4e-130 3
UNIPROTKB|F1MAH7 - symbol:F1MAH7 "Uncharacterized protein... 561 1.7e-129 3
UNIPROTKB|F1N993 - symbol:F1N993 "Uncharacterized protein... 576 2.5e-122 3
GENEDB_PFALCIPARUM|PFF0100w - symbol:PFF0100w "putative A... 601 3.3e-121 3
UNIPROTKB|G3MYJ7 - symbol:SKIV2L2 "Uncharacterized protei... 593 1.2e-110 2
POMBASE|SPAC6F12.16c - symbol:mtr4 "ATP-dependent RNA hel... 586 3.1e-109 2
ASPGD|ASPL0000070749 - symbol:mtr4 species:162425 "Emeric... 586 1.1e-107 2
UNIPROTKB|D4AE49 - symbol:D4AE49 "Uncharacterized protein... 441 5.1e-86 3
UNIPROTKB|Q10701 - symbol:helY "Probable helicase HelY" s... 412 2.1e-74 3
TAIR|locus:2020573 - symbol:EMB25 "EMBRYO DEFECTIVE 25" s... 715 2.0e-67 3
RGD|1305984 - symbol:Skiv2l2 "superkiller viralicidic act... 443 1.9e-40 1
UNIPROTKB|H7C4L3 - symbol:SKIV2L "Helicase SKI2W" species... 281 3.6e-23 1
RGD|1560014 - symbol:Ddx60 "DEAD (Asp-Glu-Ala-Asp) box po... 185 2.4e-21 4
UNIPROTKB|Q8IY21 - symbol:DDX60 "Probable ATP-dependent R... 181 5.7e-20 4
WB|WBGene00016194 - symbol:C28H8.3 species:6239 "Caenorha... 218 1.5e-19 5
UNIPROTKB|J9P0M0 - symbol:DDX60 "Uncharacterized protein"... 182 1.7e-19 5
UNIPROTKB|E2QSY2 - symbol:DDX60 "Uncharacterized protein"... 182 1.7e-19 5
UNIPROTKB|G4N3Z7 - symbol:MGG_05900 "Uncharacterized prot... 183 2.5e-19 3
UNIPROTKB|Q5H9U9 - symbol:DDX60L "Probable ATP-dependent ... 198 3.7e-18 3
TAIR|locus:2125677 - symbol:AT4G32700 species:3702 "Arabi... 228 1.4e-17 4
UNIPROTKB|G4MUH1 - symbol:MGG_07250 "DEAD/DEAH box helica... 188 1.5e-17 3
ZFIN|ZDB-GENE-061207-43 - symbol:hfm1 "HFM1, ATP-dependen... 158 3.9e-17 2
DICTYBASE|DDB_G0278827 - symbol:DDB_G0278827 "Probable AT... 153 2.1e-16 3
CGD|CAL0001532 - symbol:orf19.3098 species:5476 "Candida ... 185 2.9e-16 3
UNIPROTKB|F1NMU1 - symbol:POLQ "Uncharacterized protein" ... 205 3.0e-16 3
UNIPROTKB|A2PYH4 - symbol:HFM1 "Probable ATP-dependent DN... 172 4.3e-16 3
UNIPROTKB|F1MFR1 - symbol:HFM1 "Uncharacterized protein" ... 174 5.4e-16 3
RGD|1584010 - symbol:Hfm1 "HFM1, ATP-dependent DNA helica... 172 8.2e-16 3
UNIPROTKB|F1S4E9 - symbol:HFM1 "Uncharacterized protein" ... 176 8.6e-16 3
SGD|S000003220 - symbol:HFM1 "Meiosis specific DNA helica... 164 1.5e-15 2
WB|WBGene00021905 - symbol:helq-1 species:6239 "Caenorhab... 201 1.8e-15 3
POMBASE|SPAC694.02 - symbol:SPAC694.02 "DEAD/DEAH box hel... 174 3.4e-15 4
UNIPROTKB|E1BMC0 - symbol:POLQ "Uncharacterized protein" ... 192 4.2e-15 4
DICTYBASE|DDB_G0279107 - symbol:DDB_G0279107 "Helicase PO... 150 5.7e-15 2
GENEDB_PFALCIPARUM|PF14_0370 - symbol:PF14_0370 "RNA heli... 158 6.1e-15 2
UNIPROTKB|Q8IL78 - symbol:PF14_0370 "DEAD/DEAH box helica... 158 6.1e-15 2
UNIPROTKB|F1NTD6 - symbol:ascc3 "Activating signal cointe... 156 6.2e-15 2
UNIPROTKB|E2QVY0 - symbol:ASCC3 "Uncharacterized protein"... 159 1.9e-14 2
UNIPROTKB|E2RA34 - symbol:HFM1 "Uncharacterized protein" ... 174 2.4e-14 4
UNIPROTKB|E1BNG3 - symbol:ascc3 "Activating signal cointe... 159 2.5e-14 2
UNIPROTKB|F6Y2F0 - symbol:ASCC3 "Uncharacterized protein"... 159 2.5e-14 2
UNIPROTKB|E2R5U9 - symbol:HFM1 "Uncharacterized protein" ... 174 2.6e-14 4
MGI|MGI:1925237 - symbol:Ascc3 "activating signal cointeg... 159 4.1e-14 2
UNIPROTKB|Q8N3C0 - symbol:ASCC3 "Activating signal cointe... 158 4.1e-14 2
UNIPROTKB|A6NGI5 - symbol:HFM1 "Probable ATP-dependent DN... 172 4.9e-14 3
RGD|1307995 - symbol:Ascc3 "activating signal cointegrato... 158 5.2e-14 2
WB|WBGene00013189 - symbol:Y54E2A.4 species:6239 "Caenorh... 169 6.2e-14 4
FB|FBgn0038344 - symbol:CG5205 species:7227 "Drosophila m... 171 1.5e-13 4
UNIPROTKB|F1PXD9 - symbol:POLQ "Uncharacterized protein" ... 203 1.8e-13 4
UNIPROTKB|F1P0I1 - symbol:F1P0I1 "Uncharacterized protein... 154 1.9e-13 4
POMBASE|SPAC9.03c - symbol:brr2 "U5 snRNP complex subunit... 171 2.4e-13 4
ASPGD|ASPL0000044033 - symbol:AN2482 species:162425 "Emer... 153 2.6e-13 3
POMBASE|SPBC13G1.10c - symbol:mug81 "ATP-dependent RNA he... 150 2.7e-13 2
SGD|S000003503 - symbol:SLH1 "Putative RNA helicase relat... 159 3.0e-13 3
WB|WBGene00012896 - symbol:snrp-200 species:6239 "Caenorh... 160 3.1e-13 3
UNIPROTKB|Q9U2G0 - symbol:Y46G5A.4 "Putative U5 small nuc... 160 3.1e-13 3
RGD|1309795 - symbol:Polq "polymerase (DNA directed), the... 207 3.6e-13 4
UNIPROTKB|D4A628 - symbol:Polq "Polymerase (DNA directed)... 207 3.6e-13 4
UNIPROTKB|F1RIW4 - symbol:DDX60 "Uncharacterized protein"... 185 5.1e-13 3
TAIR|locus:2089144 - symbol:RCK "ROCK-N-ROLLERS" species:... 166 9.1e-13 3
TAIR|locus:2059969 - symbol:AT2G42270 species:3702 "Arabi... 175 2.1e-12 5
FB|FBgn0002905 - symbol:mus308 "mutagen-sensitive 308" sp... 201 2.4e-12 4
UNIPROTKB|O75417 - symbol:POLQ "DNA polymerase theta" spe... 203 3.9e-12 4
ZFIN|ZDB-GENE-040724-232 - symbol:si:rp71-1p14.5 "si:rp71... 203 4.6e-12 3
WB|WBGene00020964 - symbol:polq-1 species:6239 "Caenorhab... 149 6.0e-12 3
WARNING: Descriptions of 41 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2075566 [details] [associations]
symbol:AT3G46960 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0005773
"vacuole" evidence=IDA] [GO:0006813 "potassium ion transport"
evidence=IMP] [GO:0035864 "response to potassium ion" evidence=IMP]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005773
EMBL:CP002686 GO:GO:0003676 GO:GO:0006813 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC IPI:IPI00544785
RefSeq:NP_190280.5 UniGene:At.28750 UniGene:At.48743
ProteinModelPortal:F4JAA5 SMR:F4JAA5 PRIDE:F4JAA5
EnsemblPlants:AT3G46960.1 GeneID:823849 KEGG:ath:AT3G46960
GO:GO:0035864 Uniprot:F4JAA5
Length = 1347
Score = 4099 (1448.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 801/1075 (74%), Positives = 906/1075 (84%)
Query: 319 EPESIDSDAEGKTTVGFNSVK---EADLSVLDEILS-VKSG--GTTSILDDGGGQQQKEA 372
E +++ + K ++ N V E D++VLDEILS K+ ++ Q +KE
Sbjct: 274 ESPKAEAEPDAKASIS-NEVSKGLETDVTVLDEILSSAKTAIMSEEAVTGSSDKQLRKEG 332
Query: 373 WVVSGSTEAIADRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVA 432
W G ++ IADRF+ELVPD+A++FPFELDNFQKEAI LE G+SVFVAAHTSAGKTVVA
Sbjct: 333 WATKGDSQDIADRFYELVPDMAIEFPFELDNFQKEAICCLEKGESVFVAAHTSAGKTVVA 392
Query: 433 EYAFALATKHCTRAVYTAPIKTISNQKYRDFSGKFDVGLLTGDVSLRPEASCLIMTTEIL 492
EYAFALATKHCTRAVYTAPIKTISNQKYRDF GKFDVGLLTGDVS+RPEASCLIMTTEIL
Sbjct: 393 EYAFALATKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSIRPEASCLIMTTEIL 452
Query: 493 RSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEF 552
RSMLYRGADIIRDIEWVIFDEVHYVND+ERGVVWEEVIIMLPRHIN VLLSATVPNT EF
Sbjct: 453 RSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHINFVLLSATVPNTFEF 512
Query: 553 ADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGEFYKVCENEAFIPQGWKAAKDAYKRKNL 612
ADWIGRTKQK+IRVTGTTKRPVPLEHCL+YSGE YKVCENE F+ +G K AKD+ K+KN
Sbjct: 513 ADWIGRTKQKEIRVTGTTKRPVPLEHCLFYSGELYKVCENEVFLSKGIKDAKDSQKKKNS 572
Query: 613 XXXXXXXXXXXXXXXPRDGARAQKREHPNRGKQNKHSVV---GIKN-SGGSQNNWGLRRS 668
+DG+++QK E +RGKQNKHS V G + SG SQNN RRS
Sbjct: 573 NAVSVAPKQQMGSSAHQDGSKSQKHEAHSRGKQNKHSSVKDVGKSSYSGNSQNNGAFRRS 632
Query: 669 EVSIWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFS 728
S WL LINKLSK SLLPVV+FCFSKN+CD+ AD ++G DLTSSSEKSEIRVFCDKAFS
Sbjct: 633 AASNWLLLINKLSKMSLLPVVVFCFSKNYCDRCADALTGTDLTSSSEKSEIRVFCDKAFS 692
Query: 729 RLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGV 788
RLKGSDRNLPQ++R+QSLL RGI +HHAGLLPIVKEV+EMLFCRGV+KVLFSTETFAMGV
Sbjct: 693 RLKGSDRNLPQVLRLQSLLHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGV 752
Query: 789 NAPARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDL 848
NAPARTVVFD LRKFDG+EFRQLLPGEYTQMAGRAGRRGLDK GTVVV+CRDE+P ESDL
Sbjct: 753 NAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRDEVPDESDL 812
Query: 849 KHIIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRK 908
+ +IVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFH+QKKLPE+QQLLM K
Sbjct: 813 RRVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLLMIK 872
Query: 909 LAQPPKTIECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQS--AHQFLMPGRVLFVKSQT 966
+ P K IECIKGEPAIE+YYDMY EA +YNN+++EA MQS A FL+ GRV+ +KS
Sbjct: 873 RSLPTKHIECIKGEPAIEDYYDMYMEANEYNNKMSEAVMQSPYAQSFLVQGRVVVMKSGM 932
Query: 967 GQDHLLGAVVKAPSANNKEYIVMLLKPDLPSASET--SLDKKSGDFSEGYFVIPKSKRGL 1024
G D+LLG V+K PS N++Y+V+++K ++P + S+ KKS D S+GYF+ PKSKRG
Sbjct: 933 GIDNLLGIVLKGPSNTNRQYVVLVIKSEIPPPEKNMVSIGKKSSDPSQGYFIAPKSKRGF 992
Query: 1025 EEEYCGSVSHRKGSGVINIKLPYHGAAAGVSYEVRGIDKKELLCICNCKIKIDQVGLLED 1084
EEE+ S RKG VI I+LPYHG AAGV YEV+G D KE LCIC+ KIKIDQV LLED
Sbjct: 993 EEEFYTKPSSRKGPVVIKIELPYHGVAAGVGYEVKGFDNKEFLCICDSKIKIDQVRLLED 1052
Query: 1085 VSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCH 1144
+ AAFS+TVQQLL LKSD K+P ALDPVKDLKLKD LVE YYKW LL+KM+ NKCH
Sbjct: 1053 GNKAAFSQTVQQLLDLKSDGNKFPPALDPVKDLKLKDAELVETYYKWTNLLQKMSMNKCH 1112
Query: 1145 GCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADLVVQ 1204
GC+KLEEHMKL +E K+HK ++ L+FQMSDEAL QMP FQGRIDVLK IGCID DLVVQ
Sbjct: 1113 GCVKLEEHMKLAREIKKHKTDLKDLEFQMSDEALLQMPAFQGRIDVLKNIGCIDDDLVVQ 1172
Query: 1205 IKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVA 1264
IKGRVACEMNSGEELICT CLFENQ ++LEPEEAVAIMSAFVFQQ+NTS P+LTPKL+ A
Sbjct: 1173 IKGRVACEMNSGEELICTVCLFENQFEELEPEEAVAIMSAFVFQQKNTSAPTLTPKLAKA 1232
Query: 1265 KERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPE 1324
K+RLY+TAIRLGELQA + +QIDPEEYA++NLKFGLVEVVYEWAKGTPFA+ICELTDVPE
Sbjct: 1233 KQRLYDTAIRLGELQAQYNLQIDPEEYAQENLKFGLVEVVYEWAKGTPFAEICELTDVPE 1292
Query: 1325 GLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYITGV 1379
GLIVRTIVRLDETCREF+NAAAIMGNSAL+KKM+ ASNAIKRDIVFAASLY+TGV
Sbjct: 1293 GLIVRTIVRLDETCREFKNAAAIMGNSALHKKMDAASNAIKRDIVFAASLYVTGV 1347
Score = 927 (331.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 175/271 (64%), Positives = 209/271 (77%)
Query: 1 MNRIQATNELAFRVGFSGHSGHLRVEPLYTVEDRTDPIKSLPDFILPPAFPRETAESIKE 60
MN+++A NEL FRVGFSGH GHLRVEP YT E R D + SLPDF+ PPAF +ET ESIK+
Sbjct: 1 MNKVEAGNELGFRVGFSGHGGHLRVEPFYTAE-RDDALNSLPDFVSPPAFAKETKESIKK 59
Query: 61 HIEDKYLSMGLDTNEFSPEKVGRQWDFDWFEMAKVPLEPSLAQSVVAPVWEVPFRRQ--- 117
HIE+KYL L+ ++FS EK QWDFDWF K+PL+PSL +SVV P WE+PFRRQ
Sbjct: 60 HIEEKYLIPRLEPDQFSAEKAENQWDFDWFSRVKMPLQPSLPRSVVVPTWELPFRRQKED 119
Query: 118 TKQGKWEPNSV--DVSELMLGAQDSGPLPRVAGPAKDFVRGSINSRPFRPGGLEDSQSLE 175
T+ G WEP SV D+SE M G QDSG PR+ GP KDF+RGS+N+RPFRPGGLEDSQS E
Sbjct: 120 TENGAWEPKSVEVDLSEQMYGDQDSGFFPRMVGPPKDFLRGSVNNRPFRPGGLEDSQSSE 179
Query: 176 RILPDGASNGEWVQEILKGGPAQVVPPSFKQGLDLGELQAYPCLWNVYKDQDQSSLKSTS 235
R+LP+G S+G+WVQE+L GGPAQ VPPSFKQ LDLG+L YP W+VY +D SS + S
Sbjct: 180 RVLPEGVSSGQWVQELLNGGPAQTVPPSFKQSLDLGDLMPYPQTWSVY--EDHSSHGNAS 237
Query: 236 DEKLNELSVQFDDLFKKAWEEDV-AEFEKDD 265
DE ++LS+QFDDLFKKAWEED +E E DD
Sbjct: 238 DENSSKLSIQFDDLFKKAWEEDTFSELEGDD 268
Score = 38 (18.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 313 YLGPQLEPESIDSD-AEGKTTVG-FNSVK 339
YL P+LEP+ ++ AE + F+ VK
Sbjct: 65 YLIPRLEPDQFSAEKAENQWDFDWFSRVK 93
>DICTYBASE|DDB_G0277211 [details] [associations]
symbol:DDB_G0277211 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0277211 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000019 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC RefSeq:XP_642686.1
ProteinModelPortal:Q86K90 EnsemblProtists:DDB0233454 GeneID:8620875
KEGG:ddi:DDB_G0277211 InParanoid:Q86K90 Uniprot:Q86K90
Length = 1378
Score = 1395 (496.1 bits), Expect = 4.1e-228, Sum P(3) = 4.1e-228
Identities = 316/754 (41%), Positives = 468/754 (62%)
Query: 642 RGKQNKHSVVGIKNSGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNHCDKL 701
RG N+ + GGS NN +S W LIN L K LPV+IF FSKN C +
Sbjct: 657 RGGHNQQQ----QQRGGSGNN-------ISGWSKLINTLKDKQQLPVIIFSFSKNKCQEY 705
Query: 702 ADGMS-GIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLP 760
A + ++LT +EKS+IRVF +++ RL D++LPQI++++ LL RGI +HH GLLP
Sbjct: 706 AGSLGQSVNLTQGNEKSQIRVFIEQSLGRLCEDDKSLPQILQMKELLERGIGVHHGGLLP 765
Query: 761 IVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMA 820
IVKE++E+LF + +VKVLF+TETFAMGVN PA+TVV+ + RK DG FR L+PGEYTQM+
Sbjct: 766 IVKELVEILFSKSLVKVLFATETFAMGVNMPAKTVVYSSTRKHDGITFRDLIPGEYTQMS 825
Query: 821 GRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLLRVEELK 880
GRAGRRGLDK+GTV++ +IP ++ ++ +I+G+ +RL SQFRLTY MIL+LLRV + K
Sbjct: 826 GRAGRRGLDKVGTVIITYWKDIPEQATIESMILGTPSRLNSQFRLTYNMILNLLRVPDFK 885
Query: 881 VEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKT---IECIKGEPAIEEYYDMYYEAEK 937
VEDM+KRSF+EF SQK+LP ++ + KL Q K ++CI GEP I+ YY ++ +A+K
Sbjct: 886 VEDMIKRSFSEFSSQKELPGIEKQI-EKLQQQQKQLAQVDCILGEPDIDHYYKLFSQAKK 944
Query: 938 YNNQITEAFMQSAHQFLMPGRVLFVKSQTGQDHL-LGAVVKAPSANNKEYIVMLLKPDLP 996
YN QI + +P +HL +G VV +++N E V D
Sbjct: 945 YNQQIQNIILN------LPN----------DNHLSIGRVVVLSTSSNIEKEV---NDDDD 985
Query: 997 SASETSLDKKSGDFSEGYFV--IPKSKRGLEEEYCGSVSHRKGSGVINIKLPYHG-AAAG 1053
+ + D + + +E Y + I + K L ++Y + R + ++KL
Sbjct: 986 DDDDNNDDDEIFE-NEKYTIGLILECKSTLIKQYTNTKVDRVFK-IFSLKLKIENDIVLC 1043
Query: 1054 VSYEV-RGIDKKELLCICNCKIKIDQVGL---LEDVSSAAFSKTV-----QQLLVLKSDE 1104
V E+ KE++ +CN K+++ Q L L S S+ + QQLL L +
Sbjct: 1044 VGNEIITSSGGKEIMKVCNEKLQLKQSDLKSILAGAESGGESEILINSLEQQLLRLIEEY 1103
Query: 1105 KKY--PQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEHMKLTKENKRH 1162
P+++DP+K LKLKD++ V Y + + + +KCH C +L +H + T++ +
Sbjct: 1104 PLPLGPKSIDPIKQLKLKDVDFVSTYDHLQSIEKLIPESKCHKCPRLHDHYEQTEKRYQL 1163
Query: 1163 KDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEELICT 1222
+ + K+ SDE L+ MP F R+D+L E+G ID + V +KGRV+ E+N+ E+L+ T
Sbjct: 1164 QYAIRDAKYTASDENLKLMPQFNIRLDILHELGYIDDENTVTLKGRVSREINTCEDLVIT 1223
Query: 1223 ECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLYNTAIRLGELQAHF 1282
E +FEN +LEP E V+++S +FQ+++ +PSLTP+L AK+ L TA + ++++
Sbjct: 1224 ELIFENAFINLEPSEVVSVLSCLIFQEKDAVQPSLTPRLEEAKQNLIKTAEKTYKVESDK 1283
Query: 1283 KVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFR 1342
+ + P++ LKFGL++VVYEWA+GTPF DIC LT+V EG IVR I R+ ETC+E R
Sbjct: 1284 GLDVVPDDKLETTLKFGLMQVVYEWARGTPFNDICTLTNVLEGSIVRAITRIGETCQEVR 1343
Query: 1343 NAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
NAA ++G++ L +KME A IKRDIVF +SLY+
Sbjct: 1344 NAARVIGDTKLLQKMEEAMRLIKRDIVFTSSLYV 1377
Score = 781 (280.0 bits), Expect = 4.1e-228, Sum P(3) = 4.1e-228
Identities = 147/248 (59%), Positives = 195/248 (78%)
Query: 368 QQKEAWVVSGSTEAIADRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAG 427
++++ W E I +L+ + A+++PF+LD+FQK+AI ++E G+SVF+ AHTSAG
Sbjct: 402 KKEKQWAFLEQKE-ITSPLSDLITNPAIEYPFDLDSFQKQAIVHMEQGESVFITAHTSAG 460
Query: 428 KTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLI 486
KTV+AEYA A+A K+ TRA+YT+PIK +SNQK+RDF F DVGL+TGDVS+ P +SCL+
Sbjct: 461 KTVIAEYAIAMAAKNMTRAIYTSPIKALSNQKFRDFKNTFNDVGLITGDVSISPSSSCLV 520
Query: 487 MTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATV 546
+TTEILRSMLY+GAD+IRDIEWVIFDEVHY+ND+ERGVVWEEVIIMLP ++ +V LSATV
Sbjct: 521 LTTEILRSMLYKGADLIRDIEWVIFDEVHYLNDLERGVVWEEVIIMLPPYVKMVFLSATV 580
Query: 547 PNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYY-SGEFYKVCE-NEAFIPQGWKAAK 604
N +EFA WIGRTKQ I V GTTKRP+PLEH ++ S E +K+ + N F+P G+ +A
Sbjct: 581 SNPLEFAQWIGRTKQLPIYVIGTTKRPIPLEHYIHTPSNELFKIVDSNRNFLPSGYNSAY 640
Query: 605 DA-YKRKN 611
++ YK N
Sbjct: 641 NSLYKTDN 648
Score = 65 (27.9 bits), Expect = 4.1e-228, Sum P(3) = 4.1e-228
Identities = 28/113 (24%), Positives = 48/113 (42%)
Query: 150 AKD-FVRGSINSRPFRPGGLE--DSQSLERILPDGASNGEWVQEILKGGPAQVVPPSFKQ 206
+KD F RG+ ++ PF PGG++ ++ S + + +WVQ V PP
Sbjct: 194 SKDNFHRGNTSNLPFLPGGIKSPNNNSTNSTNNNNQTPIDWVQ-FWHSKSLLVKPPGLDN 252
Query: 207 G-LDLGELQAYPCLWNVYKDQDQSSLKSTSDEKLNELSVQFDDLFKKAWEEDV 258
G LD E N+ K ++ + ++ + Q +K EE+V
Sbjct: 253 GILDFNE--------NINKQDNKQQQQQQQQQQQQQQQQQQQQEKEKEEEEEV 297
Score = 48 (22.0 bits), Expect = 2.6e-226, Sum P(3) = 2.6e-226
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 222 VYKDQDQSSLKSTSDEKLNELSVQFDDLFKKAWEED 257
VY+D DQ +E+L+EL DD+ K E D
Sbjct: 324 VYEDDDQEDDLDIEEEELDEL----DDIEKTKEEID 355
>UNIPROTKB|Q15477 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=TAS] Reactome:REACT_17015 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 EMBL:AF019413 EMBL:AL662849 EMBL:AL645922
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC EMBL:U09877 EMBL:X98378
EMBL:Z48796 IPI:IPI00414819 PIR:S56752 RefSeq:NP_008860.4
UniGene:Hs.89864 ProteinModelPortal:Q15477 SMR:Q15477 IntAct:Q15477
STRING:Q15477 PhosphoSite:Q15477 DMDM:3123284 PaxDb:Q15477
PRIDE:Q15477 DNASU:6499 Ensembl:ENST00000375394
Ensembl:ENST00000383336 Ensembl:ENST00000412823
Ensembl:ENST00000421789 Ensembl:ENST00000429465
Ensembl:ENST00000448219 GeneID:6499 KEGG:hsa:6499 UCSC:uc003nyn.1
CTD:6499 GeneCards:GC06P031926 H-InvDB:HIX0005742
H-InvDB:HIX0166115 H-InvDB:HIX0166390 H-InvDB:HIX0166908
H-InvDB:HIX0167165 H-InvDB:HIX0167404 HGNC:HGNC:10898 MIM:600478
MIM:614602 neXtProt:NX_Q15477 Orphanet:84064 PharmGKB:PA35798
HOVERGEN:HBG060025 InParanoid:Q15477 OrthoDB:EOG47H5P5
PhylomeDB:Q15477 ChiTaRS:SKIV2L GenomeRNAi:6499 NextBio:25263
ArrayExpress:Q15477 Bgee:Q15477 CleanEx:HS_SKIV2L
Genevestigator:Q15477 Uniprot:Q15477
Length = 1246
Score = 1288 (458.5 bits), Expect = 1.9e-219, Sum P(3) = 1.9e-219
Identities = 299/714 (41%), Positives = 434/714 (60%)
Query: 672 IWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLK 731
++L+L+ L ++ LPVV+F FS+ CD+ A G++ +DLT+SSEKSEI +F + +RL+
Sbjct: 553 VYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLR 612
Query: 732 GSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAP 791
GSDR LPQ++ + LL RG+ +HH+G+LPI+KE++EMLF RG+VKVLF+TETFAMGVN P
Sbjct: 613 GSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMP 672
Query: 792 ARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHI 851
ARTVVFD++RK DG FR LLPGEY QMAGRAGRRGLD GTV++LC+ +P +DL +
Sbjct: 673 ARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRM 732
Query: 852 IVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQK--KLPEQQ--QLLMR 907
++G ++L+SQFRLTY MIL+LLRV+ L+VEDM+KRSF+EF S+K K EQ +L R
Sbjct: 733 MMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAELTKR 792
Query: 908 --KLAQPPKTIECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVK 963
L +P T + + + EYY E + + I M+S + + L GRV+ VK
Sbjct: 793 LGALEEPDMTGQLVD----LPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVVVK 848
Query: 964 SQTGQDHLLGAVVKAPSANNKEYIVMLLKPDLPSASETSLDKKSGDFSEGYFVIPKSKRG 1023
+Q + LG +++ S + L+ D P S+ D+ Y P G
Sbjct: 849 NQE-HHNALGVILQVSSNSTSRVFTTLVLCDKP-LSQDPQDRGPATAEVPY---PDDLVG 903
Query: 1024 LEEEYC-GSVSHRKGSGVINIKLPYHGAAAGVSYEVRGIDKKELLCICNCKIKIDQVGLL 1082
+ G H V+ ++ P G A ++ +V ++ +++L + K Q
Sbjct: 904 FKLFLPEGPCDHT----VVKLQ-P--GDMAAITTKVLRVNGEKILEDFS---KRQQPKFK 953
Query: 1083 EDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAANK 1142
+D AA + VQ+LL L P LDPV DL+LKDM++VE + L + +
Sbjct: 954 KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQ 1013
Query: 1143 C-HGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADL 1201
C H +++KL +E + + E+ L+F +SD++L +P++ R++VL+ +G +D
Sbjct: 1014 CVHSPRFPAQYLKL-RERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAG 1072
Query: 1202 VVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKL 1261
V++ GRVAC M+S EL+ TE +F+N L L PEE A++S V Q + L L
Sbjct: 1073 TVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTL 1131
Query: 1262 SVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTD 1321
ER+ A R+GE+Q + EE+ + L FGLVEVVYEWA+G PF+++ L+
Sbjct: 1132 KQGIERVRAVAKRIGEVQVACGLNQTVEEFVGE-LNFGLVEVVYEWARGMPFSELAGLSG 1190
Query: 1322 VPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLY 1375
PEGL+VR I RL E CR R AA ++G L KMETA+ ++RDIVFAASLY
Sbjct: 1191 TPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244
Score = 786 (281.7 bits), Expect = 1.9e-219, Sum P(3) = 1.9e-219
Identities = 160/279 (57%), Positives = 201/279 (72%)
Query: 341 ADLSVLDEILSVKSGGTTSILDDGGGQQQKEAWVVS-GSTEAIADRFHELVPDLALDFPF 399
A S L++++ +K T + +E W + +T + D F+ L+P A + F
Sbjct: 252 ARASSLEDLV-LKEASTAVSTPEAPEPPSQEQWAIPVDATSPVGD-FYRLIPQPAFQWAF 309
Query: 400 ELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQK 459
E D FQK+AI +LE DSVFVAAHTSAGKTVVAEYA ALA KH TR +YT+PIK +SNQK
Sbjct: 310 EPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQK 369
Query: 460 YRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVN 518
+RDF F DVGLLTGDV L PEASCLIMTTEILRSMLY G+D+IRD+EWVIFDEVHY+N
Sbjct: 370 FRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYIN 429
Query: 519 DIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEH 578
D+ERGVVWEEV+IMLP H++I+LLSATVPN +EFADWIGR K+++I V T RPVPLEH
Sbjct: 430 DVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEH 489
Query: 579 CLYYS------GEFYKVCENE-AFIPQGWKAAKDAYKRK 610
L+ GE + + ++ AF +G+ AA +A K +
Sbjct: 490 YLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKER 528
Score = 85 (35.0 bits), Expect = 1.9e-219, Sum P(3) = 1.9e-219
Identities = 46/171 (26%), Positives = 69/171 (40%)
Query: 42 PDFILPPAFPRETAESIKEHIEDKYLSMGLDTNEFSPEKVGRQWDFDWFEMAKVPLEP-S 100
P+ LP P A +++ E +LS E R+W K +P S
Sbjct: 39 PESSLPHGLP-PCAPDLQQEAEQLFLSSPAWLPLHGVEHSARKWQ------RKT--DPWS 89
Query: 101 LAQSVVAPV-WEVPFRRQTKQGK-WEPNSVDVSELMLGAQDSGPLPRVAGPAKDFVRGSI 158
L + APV ++ +R G+ V + L A S L R GPA + G+
Sbjct: 90 LLAVLGAPVPSDLQAQRHPTTGQILGYKEVLLENTNLSATTSLSLRRPPGPASQSLWGNP 149
Query: 159 NSRPFRPGGLEDSQSLERILPDGASNGEWVQEILKGGPAQVVPPSFKQGLD 209
PF PGG++ E + D + E +EI +PP FK+G+D
Sbjct: 150 TQYPFWPGGMD-----EPTITDLNTREEAEEEIDFEKDLLTIPPGFKKGMD 195
>RGD|1303059 [details] [associations]
symbol:Skiv2l "superkiller viralicidic activity 2-like (S.
cerevisiae )" species:10116 "Rattus norvegicus" [GO:0055087 "Ski
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
RGD:1303059 GO:GO:0005524 GO:GO:0003676 EMBL:BX883045
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 HOGENOM:HOG000163048
KO:K12599 CTD:6499 HOVERGEN:HBG060025 OrthoDB:EOG47H5P5
IPI:IPI00417365 RefSeq:NP_998724.1 UniGene:Rn.138027
ProteinModelPortal:Q6MG76 IntAct:Q6MG76 PhosphoSite:Q6MG76
PRIDE:Q6MG76 GeneID:294260 KEGG:rno:294260 UCSC:RGD:1303059
InParanoid:Q6MG76 NextBio:637849 ArrayExpress:Q6MG76
Genevestigator:Q6MG76 Uniprot:Q6MG76
Length = 1241
Score = 1294 (460.6 bits), Expect = 2.4e-219, Sum P(3) = 2.4e-219
Identities = 300/712 (42%), Positives = 432/712 (60%)
Query: 672 IWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLK 731
++L L+ L ++ LPVV+F FS+ CD+ A G++ +DLT+SSEKSEI +F + +RL+
Sbjct: 547 VYLALLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLR 606
Query: 732 GSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAP 791
GSDR LPQ++ + LLRRG+ +HH+G+LPI+KE++EMLF RG+VKVLF+TETFAMGVN P
Sbjct: 607 GSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMP 666
Query: 792 ARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHI 851
ARTVVFD++RK DG FR LLPGEY QMAGRAGRRGLD GTV++LC+ +P +DL +
Sbjct: 667 ARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRM 726
Query: 852 IVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQ 911
++G ++L+SQFRLTY MIL+LLRV+ L+VEDM+KRSF+EF S+K +Q L L +
Sbjct: 727 MMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALA-DLTK 785
Query: 912 PPKTIE--CIKGEPA-IEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVKSQT 966
+E + G+ A + EYY E + N I M+S + + L GRV+ VK++
Sbjct: 786 RLGALEEPDVTGQLADLPEYYSWAEELTETRNMIQRRIMESVNGLKSLSVGRVVVVKNEE 845
Query: 967 GQDHLLGAVVKAPSANNKEYIVMLLKPDLPSASETSLDK--KSGDFSEGYFVIPKSKRGL 1024
+ LG +++ S + L+ D P+ SE DK + D ++ K L
Sbjct: 846 -HHNALGVILQVSSNSTSRVFTTLVLCDKPAVSENPRDKGPATPDVPHPDDLVG-FKLFL 903
Query: 1025 EEEYCGSVSHRKGSGVINIKLPYHGAAAGVSYEVRGIDKKELLCICNCKIKIDQVGLLED 1084
E C H V ++ P G A +S +V ++ ++ I K Q +D
Sbjct: 904 PEGPC---EHT----VAKLQ-P--GDVAAISTKVLRVNGEK---ISEDFSKRQQPKFRKD 950
Query: 1085 VSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKC- 1143
AA + VQ+LL L P LDP+ DL+LKD+ +VE + L + +C
Sbjct: 951 PPLAAVTTAVQELLRLAQAYPAGPPTLDPINDLQLKDVAVVEGGLRARKLEELIRGAQCV 1010
Query: 1144 HGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADLVV 1203
H +++KL +E + + E+ L+F +SD++L +P++ R++VL+ +G +D V
Sbjct: 1011 HSPRFPAQYVKL-QERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTV 1069
Query: 1204 QIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSV 1263
++ GRVAC M+S EL+ TE +F+N L L PEE A++S V Q L L
Sbjct: 1070 KLAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQ 1128
Query: 1264 AKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVP 1323
ER+ A R+GE+Q + EE+ + L FGLVEVVYEWA+G PF+++ L+ P
Sbjct: 1129 GVERVKAVAKRIGEVQVACGLNQTVEEFVGE-LNFGLVEVVYEWARGMPFSELAGLSGTP 1187
Query: 1324 EGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLY 1375
EGL+VR I RL E CR R AA ++G L KMETA+ ++RDIVFAASLY
Sbjct: 1188 EGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1239
Score = 778 (278.9 bits), Expect = 2.4e-219, Sum P(3) = 2.4e-219
Identities = 161/276 (58%), Positives = 199/276 (72%)
Query: 344 SVLDEILSVKSGGTTSILDDGGGQQQKEAWVVSGS-TEAIADRFHELVPDLALDFPFELD 402
S L++++ ++ S L+ Q E W V T + D F+ L+P A + FE D
Sbjct: 249 SSLEDLVLKEASTVVSTLEPLKPPPQ-EQWAVPVDVTSPVGD-FYRLIPQPAFQWAFEPD 306
Query: 403 NFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRD 462
FQK+AI +LE DSVFVAAHTSAGKTVVAEYA ALA KH TR +YT+PIK +SNQK+RD
Sbjct: 307 VFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRD 366
Query: 463 FSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIE 521
F F DVGLLTGDV L PEASCLIMTTEILRSMLY G+D+IRD+EWVIFDEVHY+ND E
Sbjct: 367 FRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAE 426
Query: 522 RGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLY 581
RGVVWEEV+IMLP H++I+LLSATVPN +EFADWIGR K+++I V T RPVPLEH L+
Sbjct: 427 RGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHYLF 486
Query: 582 YS------GEFYKVCENE-AFIPQGWKAAKDAYKRK 610
GE + + ++ AF +G+ AA +A K +
Sbjct: 487 TGNSPKTQGELFLLLDSRGAFHTKGYYAAVEAKKER 522
Score = 86 (35.3 bits), Expect = 2.4e-219, Sum P(3) = 2.4e-219
Identities = 31/103 (30%), Positives = 46/103 (44%)
Query: 135 LGAQDSGPLPRVAGPAKDFVRGSINSRPFRPGGLEDSQSLERILPDGASNGEWVQEILKG 194
L A S L R GPA + G+ PF PGG+++ + D ++ E +EI
Sbjct: 126 LSATTSLSLRRPPGPASQSLWGNPTQYPFWPGGMDEPS-----ITDLSTREEAEEEIDFE 180
Query: 195 GPAQVVPPSFKQGLDLGELQAYPCLWNVYKDQDQSSLKSTSDE 237
VPP FK+G+D P L ++ + + L S DE
Sbjct: 181 KDLLTVPPGFKKGVDFAPKAPVPGLLSLSRLLEPLDL-SGGDE 222
>UNIPROTKB|F1LP39 [details] [associations]
symbol:Skiv2l "Protein Skiv2l" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 RGD:1303059 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
OMA:TRLDETC GeneTree:ENSGT00690000102154 IPI:IPI00417365
Ensembl:ENSRNOT00000000481 Uniprot:F1LP39
Length = 1206
Score = 1294 (460.6 bits), Expect = 5.0e-219, Sum P(3) = 5.0e-219
Identities = 300/712 (42%), Positives = 432/712 (60%)
Query: 672 IWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLK 731
++L L+ L ++ LPVV+F FS+ CD+ A G++ +DLT+SSEKSEI +F + +RL+
Sbjct: 512 VYLALLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLR 571
Query: 732 GSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAP 791
GSDR LPQ++ + LLRRG+ +HH+G+LPI+KE++EMLF RG+VKVLF+TETFAMGVN P
Sbjct: 572 GSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMP 631
Query: 792 ARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHI 851
ARTVVFD++RK DG FR LLPGEY QMAGRAGRRGLD GTV++LC+ +P +DL +
Sbjct: 632 ARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRM 691
Query: 852 IVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQ 911
++G ++L+SQFRLTY MIL+LLRV+ L+VEDM+KRSF+EF S+K +Q L L +
Sbjct: 692 MMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALA-DLTK 750
Query: 912 PPKTIE--CIKGEPA-IEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVKSQT 966
+E + G+ A + EYY E + N I M+S + + L GRV+ VK++
Sbjct: 751 RLGALEEPDVTGQLADLPEYYSWAEELTETRNMIQRRIMESVNGLKSLSVGRVVVVKNEE 810
Query: 967 GQDHLLGAVVKAPSANNKEYIVMLLKPDLPSASETSLDK--KSGDFSEGYFVIPKSKRGL 1024
+ LG +++ S + L+ D P+ SE DK + D ++ K L
Sbjct: 811 -HHNALGVILQVSSNSTSRVFTTLVLCDKPAVSENPRDKGPATPDVPHPDDLVG-FKLFL 868
Query: 1025 EEEYCGSVSHRKGSGVINIKLPYHGAAAGVSYEVRGIDKKELLCICNCKIKIDQVGLLED 1084
E C H V ++ P G A +S +V ++ ++ I K Q +D
Sbjct: 869 PEGPC---EHT----VAKLQ-P--GDVAAISTKVLRVNGEK---ISEDFSKRQQPKFRKD 915
Query: 1085 VSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKC- 1143
AA + VQ+LL L P LDP+ DL+LKD+ +VE + L + +C
Sbjct: 916 PPLAAVTTAVQELLRLAQAYPAGPPTLDPINDLQLKDVAVVEGGLRARKLEELIRGAQCV 975
Query: 1144 HGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADLVV 1203
H +++KL +E + + E+ L+F +SD++L +P++ R++VL+ +G +D V
Sbjct: 976 HSPRFPAQYVKL-QERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTV 1034
Query: 1204 QIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSV 1263
++ GRVAC M+S EL+ TE +F+N L L PEE A++S V Q L L
Sbjct: 1035 KLAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQ 1093
Query: 1264 AKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVP 1323
ER+ A R+GE+Q + EE+ + L FGLVEVVYEWA+G PF+++ L+ P
Sbjct: 1094 GVERVKAVAKRIGEVQVACGLNQTVEEFVGE-LNFGLVEVVYEWARGMPFSELAGLSGTP 1152
Query: 1324 EGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLY 1375
EGL+VR I RL E CR R AA ++G L KMETA+ ++RDIVFAASLY
Sbjct: 1153 EGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1204
Score = 778 (278.9 bits), Expect = 5.0e-219, Sum P(3) = 5.0e-219
Identities = 161/276 (58%), Positives = 199/276 (72%)
Query: 344 SVLDEILSVKSGGTTSILDDGGGQQQKEAWVVSGS-TEAIADRFHELVPDLALDFPFELD 402
S L++++ ++ S L+ Q E W V T + D F+ L+P A + FE D
Sbjct: 214 SSLEDLVLKEASTVVSTLEPLKPPPQ-EQWAVPVDVTSPVGD-FYRLIPQPAFQWAFEPD 271
Query: 403 NFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRD 462
FQK+AI +LE DSVFVAAHTSAGKTVVAEYA ALA KH TR +YT+PIK +SNQK+RD
Sbjct: 272 VFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRD 331
Query: 463 FSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIE 521
F F DVGLLTGDV L PEASCLIMTTEILRSMLY G+D+IRD+EWVIFDEVHY+ND E
Sbjct: 332 FRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAE 391
Query: 522 RGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLY 581
RGVVWEEV+IMLP H++I+LLSATVPN +EFADWIGR K+++I V T RPVPLEH L+
Sbjct: 392 RGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHYLF 451
Query: 582 YS------GEFYKVCENE-AFIPQGWKAAKDAYKRK 610
GE + + ++ AF +G+ AA +A K +
Sbjct: 452 TGNSPKTQGELFLLLDSRGAFHTKGYYAAVEAKKER 487
Score = 83 (34.3 bits), Expect = 5.0e-219, Sum P(3) = 5.0e-219
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 135 LGAQDSGPLPRVAGPAKDFVRGSINSRPFRPGGLEDSQSLERILPDGASNGEWVQEILKG 194
L A S L R GPA + G+ PF PGG+++ + D ++ E +EI
Sbjct: 88 LSATTSLSLRRPPGPASQSLWGNPTQYPFWPGGMDEPS-----ITDLSTREEAEEEIDFE 142
Query: 195 GPAQVVPPSFKQGLD 209
VPP FK+G+D
Sbjct: 143 KDLLTVPPGFKKGVD 157
>POMBASE|SPCC550.03c [details] [associations]
symbol:SPCC550.03c "Ski complex RNA helicase Ski2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0055087 "Ski complex" evidence=ISO]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
[GO:2000765 "regulation of cytoplasmic translation" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC550.03c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:2000765
EMBL:CU329672 GO:GO:0071276 GO:GO:0071585 GO:GO:0003723
GO:GO:0006402 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003724 eggNOG:COG4581 GO:GO:0055087 PIR:T41378
RefSeq:NP_588095.1 ProteinModelPortal:O59801 STRING:O59801
EnsemblFungi:SPCC550.03c.1 GeneID:2538841 KEGG:spo:SPCC550.03c
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
NextBio:20800023 Uniprot:O59801
Length = 1213
Score = 1512 (537.3 bits), Expect = 1.3e-218, Sum P(3) = 1.3e-218
Identities = 297/526 (56%), Positives = 388/526 (73%)
Query: 379 TEAIADRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFAL 438
+ A + F +LVP++ALDFPFELDNFQKEAIY+LE GDSVFVAAHTSAGKTVVAEYA AL
Sbjct: 259 SSAPIENFQQLVPEMALDFPFELDNFQKEAIYHLEMGDSVFVAAHTSAGKTVVAEYAIAL 318
Query: 439 ATKHCTRAVYTAPIKTISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLY 497
A KH T+A+YT+PIK +SNQK+RDF KF DVG+LTGDV + PE SCL+MTTEILRSMLY
Sbjct: 319 AQKHMTKAIYTSPIKALSNQKFRDFKHKFEDVGILTGDVQVNPEGSCLLMTTEILRSMLY 378
Query: 498 RGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIG 557
RGAD+IRD+E+VIFDEVHYVND+ERGVVWEEVIIMLP H+ ++LLSATVPNT EFA W+G
Sbjct: 379 RGADLIRDVEFVIFDEVHYVNDLERGVVWEEVIIMLPPHVTLILLSATVPNTKEFASWVG 438
Query: 558 RTKQKKIRVTGTTKRPVPLEHCLYYSGEFYKVCENEAFIPQGWKAAKDAYKRKNLXXXXX 617
RTK+K I V T KRPVPLEH L+ +K+ + Q + D YK N
Sbjct: 439 RTKKKNIYVISTLKRPVPLEHYLWVKQNMFKI------VDQHGRFLMDGYKSAN-----D 487
Query: 618 XXXXXXXXXXPRDGARAQKREHPNRGKQNKHSVVGIKNSGGSQNNWGLRRSEVSIWLTLI 677
+D + + RG+ + +++ + G +++ + R + + W+ LI
Sbjct: 488 ALKKPDKPVIAKDNKNSARGRGAARGRGVQTNMM--RGRGSAKS---VERRDANTWVHLI 542
Query: 678 NKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNL 737
L K++LLPV++F FSK C++ D ++ DL + EKSE+ V +KA +RLK DR L
Sbjct: 543 GHLHKQNLLPVIVFVFSKKRCEEYVDTLTNRDLNNHQEKSEVHVVIEKAVARLKKEDRLL 602
Query: 738 PQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVF 797
PQI R++ +L RG+A+HH GLLPI+KE++E+LF RG+VKVLF+TETFAMGVN PA++VVF
Sbjct: 603 PQIGRMREMLSRGLAVHHGGLLPIIKEIVEILFQRGLVKVLFATETFAMGVNMPAKSVVF 662
Query: 798 DNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSAT 857
+K DGR FR LLPGEYTQ +GRAGRRGLD GTV++L R E+P + L+H+I+G ++
Sbjct: 663 SGTQKHDGRNFRDLLPGEYTQCSGRAGRRGLDVTGTVIILSRSELPDTASLRHMIMGPSS 722
Query: 858 RLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQ 903
+L SQFRLTY MIL+LLRVE L++EDM+KRSF+E +Q +P+ ++
Sbjct: 723 KLISQFRLTYNMILNLLRVETLRIEDMIKRSFSENVNQTLVPQHEE 768
Score = 561 (202.5 bits), Expect = 1.3e-218, Sum P(3) = 1.3e-218
Identities = 123/310 (39%), Positives = 184/310 (59%)
Query: 1069 ICNCKIKIDQVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQAL-DPVKDLKLKDMNLVEA 1127
+CN ++ID G+ D AF K +Q +K K+ L + V K++D EA
Sbjct: 909 VCNTILRIDSGGI-RDRRGGAFRKLSEQFASIK----KFSDLLFEEVNWSKVRDFEFCEA 963
Query: 1128 YYKWAGLLRKMAANKCHGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGR 1187
+ K L K++ N H L + + ++ L +SD+ L+ +PD++ R
Sbjct: 964 FEKRNFLQNKLSGNPIISTPNFLTHFALAYQEYELESNIDNLSSYISDQNLELLPDYEQR 1023
Query: 1188 IDVLKEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVF 1247
I VL+E+G IDA+ V +KGRVACE+NS EL+ TE + EN L D EE +A++SAFVF
Sbjct: 1024 IKVLQELGYIDAERTVLLKGRVACEINSTSELVLTELILENSLADFSCEETIALLSAFVF 1083
Query: 1248 QQRNTSEPSLTPKLSVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNL-KFGLVEVVYE 1306
++ EP+++P L KE + + A ++ ++Q H++V E ++ +FGL+EV YE
Sbjct: 1084 DEKTEVEPTISPHLQKGKEMILSVAEKVNQIQEHYQVLYFNEGNDFESQPRFGLMEVCYE 1143
Query: 1307 WAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKR 1366
WA+G F I +LTDV EG IVRTI+RLDE RE R AA ++G+S++Y KME N I+R
Sbjct: 1144 WARGMSFNRITDLTDVLEGSIVRTIIRLDEVLRECRGAARVVGDSSMYTKMEECQNLIRR 1203
Query: 1367 DIVFAASLYI 1376
+IVF SLY+
Sbjct: 1204 NIVFCPSLYM 1213
Score = 78 (32.5 bits), Expect = 1.3e-218, Sum P(3) = 1.3e-218
Identities = 40/167 (23%), Positives = 73/167 (43%)
Query: 111 EVPFRRQTKQGKWEPNSVDVSELM--LGAQDSGPLPRVAGPAKDFVRGSINSRPFRPGGL 168
++ F+R +GK +V EL+ L +++S R +FVRGS ++ PF L
Sbjct: 85 QIRFQRHGLEGKIMGYK-EVPELIEDLNSKNSSSFLRKPSSKNEFVRGSTSNIPF----L 139
Query: 169 EDSQSLERILPDGASNGEWVQEILKGGPAQV-VPPSFKQGLDLGELQAYPCLWNVYKDQD 227
D ++ I + + V+ L G + VPP F +GL + L + + D +
Sbjct: 140 ADDSDVDAIAGEPS-----VKMALYGEDGLLQVPPGFSRGLSMTATSTTDNLNDEF-DPE 193
Query: 228 QSSLKSTSDEKLNELSVQFDDLFKKAWEEDVAEFEKDDWLPNRIKIM 274
+ K N +++ +L + + E DD LP++ I+
Sbjct: 194 KWDTKKVKSSNRNFVTIH--ELNEHLKNVNSKHSEIDDLLPDKRSIV 238
Score = 57 (25.1 bits), Expect = 2.0e-165, Sum P(3) = 2.0e-165
Identities = 15/47 (31%), Positives = 28/47 (59%)
Query: 1082 LEDVSSAAFSKTVQQLLVLKSDEK--KYPQALDPVKDLKLKDMNLVE 1126
+ED+ +FS+ V Q LV + +EK + + L +K ++ D++L E
Sbjct: 746 IEDMIKRSFSENVNQTLVPQHEEKIKSFEEKLSALKK-EMSDVDLKE 791
Score = 37 (18.1 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K + +F+D+
Sbjct: 330 SPIKALSNQKFRDFKHKFEDV 350
>UNIPROTKB|F1RQW4 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:CT956038 Ensembl:ENSSSCT00000001566 ArrayExpress:F1RQW4
Uniprot:F1RQW4
Length = 1246
Score = 1286 (457.8 bits), Expect = 1.3e-218, Sum P(3) = 1.3e-218
Identities = 303/740 (40%), Positives = 441/740 (59%)
Query: 644 KQNKHSVVGIKNSGGSQ-NNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNHCDKLA 702
+ +KH+ + G Q N G + ++L+L+ L + LPVV+F FS+ CD+ A
Sbjct: 528 RMSKHA----QTFGAKQPTNQGGPAQDRGVYLSLLASLRAREQLPVVVFTFSRGRCDEQA 583
Query: 703 DGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIV 762
G++ +DLT+SSEKSEI +F + +RL+GSDR LPQ++ + LL RG+ +HH+G+LPI+
Sbjct: 584 SGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPIL 643
Query: 763 KEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMAGR 822
KE++EMLF RG+VKVLF+TETFAMGVN PARTVVFD++RK DG FR LLPGEY QMAGR
Sbjct: 644 KEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGR 703
Query: 823 AGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLLRVEELKVE 882
AGRRGLD GTV++LC+ +P +DL +++G ++L+SQFRLTY MIL+LLRV+ L+VE
Sbjct: 704 AGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVE 763
Query: 883 DMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKTIE--CIKGEPA-IEEYYDMYYEAEKYN 939
DM+KRSF+EF S+K +Q L +L + +E + G+ + EYY E +
Sbjct: 764 DMMKRSFSEFPSRKDSKAHEQALA-ELTKRLGALEEPDVTGQLVDLPEYYSWGEELTETR 822
Query: 940 NQITEAFMQSAH--QFLMPGRVLFVKSQTGQDHLLGAVVKAPSANNKEYIVMLLKPDLPS 997
+ I M+S + + L GRV+ VKS+ + LG +++ S + L+ D P
Sbjct: 823 SLIQRRIMESVNGLKSLSVGRVVVVKSRE-HHNALGVILQVSSTSTSRVFTTLVLCDKPM 881
Query: 998 ASETSLDKKSGDFSEGYFVIPKSKRGLEEEYC-GSVSHRKGSGVINIKLPYHGAAAGVSY 1056
SE K Y P G + G H V ++ P G A ++
Sbjct: 882 -SEDPQQKGPASPDVPY---PDDLVGFKLFLPEGPCDHT----VAKLQ-P--GDVAAITT 930
Query: 1057 EVRGIDKKELLCICNCKIKIDQVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKD 1116
+V ++ +++L + K Q +D SAA + VQ+LL L P LDPV D
Sbjct: 931 KVLRVNGEKILEDFS---KRQQPKFKKDPPSAAVTTAVQELLRLAQAHLAGPPTLDPVND 987
Query: 1117 LKLKDMNLVEAYYKWAGLLRKMAANKC-HGCIKLEEHMKLTKENKRHKDEVNTLKFQMSD 1175
L+LKD+++VE + L + +C H +++KL +E + + E+ L+F +SD
Sbjct: 988 LQLKDVSVVEGGLRARKLEELIRGAQCVHSPRFPAQYVKL-RERMQIQKEMERLRFLLSD 1046
Query: 1176 EALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 1235
++L +P++ R++VL+ +G +D V++ GRVAC M+S EL+ TE +F+N L L P
Sbjct: 1047 QSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRP 1105
Query: 1236 EEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLYNTAIRLGELQAHFKVQIDPEEYARDN 1295
EE A++S V Q L L ER+ A R+GE+Q + EE+ +
Sbjct: 1106 EEIAALLSGLVCQSPGDPGDQLPSTLKQGVERVQAVAKRIGEVQVACGLNQTVEEFVGE- 1164
Query: 1296 LKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALYK 1355
L FGLVEVVYEWA+G PF+++ L+ PEGL+VR I RL E CR R AA ++G L
Sbjct: 1165 LNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGA 1224
Query: 1356 KMETASNAIKRDIVFAASLY 1375
KMETA+ ++RDIVFAASLY
Sbjct: 1225 KMETAATLLRRDIVFAASLY 1244
Score = 771 (276.5 bits), Expect = 1.3e-218, Sum P(3) = 1.3e-218
Identities = 159/279 (56%), Positives = 199/279 (71%)
Query: 341 ADLSVLDEILSVKSGGTTSILDDGGGQQQKEAWVVSGS-TEAIADRFHELVPDLALDFPF 399
A S L++++ +K T + +E W + T + D F+ L+P A + F
Sbjct: 252 ARASSLEDLV-LKEASTAVAPREPPKPPPQEEWAIPVDVTSPVGD-FYRLIPQPAFQWAF 309
Query: 400 ELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQK 459
E D FQK+AI +LE DSVFVAAHTSAGKTVVAEYA ALA KH TR +YT+PIK +SNQK
Sbjct: 310 EPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQK 369
Query: 460 YRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVN 518
+RDF F DVGLLTGDV L PEASCLIMTTEILRSMLY G+D+IRD+EWVIFDEVHY+N
Sbjct: 370 FRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYIN 429
Query: 519 DIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEH 578
D ERGVVWEEV+IMLP H++I+LLSATVPN +EFADWIGR K+++I V T RPVPLEH
Sbjct: 430 DAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEH 489
Query: 579 CLYYS------GEFYKVCENE-AFIPQGWKAAKDAYKRK 610
L+ GE + + ++ +F +G+ AA +A K +
Sbjct: 490 YLFTGNSPKTQGELFLLLDSRGSFHTKGYYAAVEAKKER 528
Score = 94 (38.1 bits), Expect = 1.3e-218, Sum P(3) = 1.3e-218
Identities = 46/175 (26%), Positives = 73/175 (41%)
Query: 38 IKSLPDFILPPAFPRETAESIKEHIEDKYLSMGLDTNEFSPEKVGRQWDFDWFEMAKVPL 97
+ P+ LP P A +++ E +LS E R+W K +
Sbjct: 35 VPGAPESTLPHGLP-PCAPDLQQEAEQLFLSSPAWLPLHGVEHSARKWQ------RK--M 85
Query: 98 EP-SLAQSVVAPV-WEVPFRRQTKQGK-WEPNSVDVSELMLGAQDSGPLPRVAGPAKDFV 154
+P SL ++ APV ++ +R G+ V + L A S L R GPA +
Sbjct: 86 DPWSLLAALGAPVPSDLQAQRHPTTGQILGYKEVLLENTNLSATTSLSLRRPPGPASQSL 145
Query: 155 RGSINSRPFRPGGLEDSQSLERILPDGASNGEWVQEILKGGPAQVVPPSFKQGLD 209
G+ PF PGG+++ + D ++ E +EI VPP FK+G+D
Sbjct: 146 WGNPTQYPFWPGGMDEPS-----ITDLSTREEAEEEIDFEKDLLTVPPGFKKGVD 195
>UNIPROTKB|E1BMS0 [details] [associations]
symbol:LOC100139548 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:DAAA02055371 IPI:IPI00690289 RefSeq:XP_003583920.1
RefSeq:XP_003587743.1 Ensembl:ENSBTAT00000007339 GeneID:100139548
KEGG:bta:100139548 Uniprot:E1BMS0
Length = 1246
Score = 1290 (459.2 bits), Expect = 1.7e-218, Sum P(3) = 1.7e-218
Identities = 297/711 (41%), Positives = 433/711 (60%)
Query: 672 IWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLK 731
++L+L+ L ++ LPVV+F FS+ CD+ A G++ +DLT+SSEKSEI +F + +RL+
Sbjct: 553 VYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLR 612
Query: 732 GSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAP 791
GSDR LPQ++ + LL RG+ +HH+G+LPI+KE++EMLF RG+VKVLF+TETFAMGVN P
Sbjct: 613 GSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMP 672
Query: 792 ARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHI 851
ARTVVFD++RK DG FR LLPGEY QMAGRAGRRGLD GTV++LC+ +P +DL +
Sbjct: 673 ARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRM 732
Query: 852 IVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQ 911
++G ++L+SQFRLTY MIL+LLRV+ L+VEDM+KRSF+EF S+K +Q L +L +
Sbjct: 733 MMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALA-ELTK 791
Query: 912 PPKTIEC--IKGEPA-IEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVKSQT 966
+E + G+ + EYY E + +QI ++S + + L GRV+ VK+Q
Sbjct: 792 KLGALEEPEVTGQLVDLPEYYSWGEELTETRSQIQHRIIESVNGLKSLSAGRVVVVKNQE 851
Query: 967 GQDHLLGAVVKAPSANNKEYIVMLLKPDLPSASETSLDKKSGDFSEGYFVIPKSKRGLEE 1026
+ LG +++ S + L+ D P SE ++ Y P G +
Sbjct: 852 -HHNALGVILQVSSNSTSRVFTALVLCDKP-VSEDPRERGPASPDVPY---PDDLVGFKL 906
Query: 1027 EYC-GSVSHRKGSGVINIKLPYHGAAAGVSYEVRGIDKKELLCICNCKIKIDQVGLLEDV 1085
G H V ++ P G A ++ +V ++ ++L + K Q +D
Sbjct: 907 FLPEGPCDHT----VAKLQ-P--GDVAAITTKVLRLNGDKILEDFS---KRQQPKFKKDP 956
Query: 1086 SSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKC-H 1144
SAA + VQ+LL L P LDPV DL+LKD+++VE + L + +C H
Sbjct: 957 PSAAVTTAVQELLRLAQAHPTGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVH 1016
Query: 1145 GCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADLVVQ 1204
+++KL +E + + E+ L+F +SD++L +P++ R++VL+ +G +D V+
Sbjct: 1017 SPRFPAQYLKL-RERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVK 1075
Query: 1205 IKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVA 1264
+ GRVAC M+S EL+ TE +F+N L L PEE A++S V Q L L
Sbjct: 1076 LAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDPGDQLPSTLKQG 1134
Query: 1265 KERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPE 1324
ER+ A R+GE+QA + EE+ + L FGLVEVVYEWA+G PF+++ L+ PE
Sbjct: 1135 VERVRTVAKRIGEVQAACGLNQTVEEFVGE-LNFGLVEVVYEWARGMPFSELAGLSGTPE 1193
Query: 1325 GLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLY 1375
GL+VR I RL E CR R AA ++G L KMETA+ ++RDIVFAASLY
Sbjct: 1194 GLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244
Score = 784 (281.0 bits), Expect = 1.7e-218, Sum P(3) = 1.7e-218
Identities = 163/283 (57%), Positives = 202/283 (71%)
Query: 337 SVKEADLSVLDEILSVKSGGTTSILDDGGGQQQKEAWVVSGS-TEAIADRFHELVPDLAL 395
SV A S L++++ +K TT + +E W + T + D F+ L+P A
Sbjct: 248 SVPLARASSLEDLV-LKEAATTVAPPEPPKPPPQEQWAIPVDVTSPVGD-FYRLIPQPAF 305
Query: 396 DFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTI 455
+ FE D FQK+AI +LE DSVFVAAHTSAGKTVVAEYA ALA KH TR +YT+PIK +
Sbjct: 306 QWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKAL 365
Query: 456 SNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEV 514
SNQK+RDF F DVGLLTGDV L PEASCLIMTTEILRSMLY G+D+IRD+EWVIFDEV
Sbjct: 366 SNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEV 425
Query: 515 HYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPV 574
HY+ND ERGVVWEEV+IMLP H++I+LLSATVPN +EFADWIGR K+++I V T RPV
Sbjct: 426 HYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPV 485
Query: 575 PLEHCLYYS------GEFYKVCENE-AFIPQGWKAAKDAYKRK 610
PLEH L+ GE + + ++ AF +G+ AA +A K +
Sbjct: 486 PLEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEAKKER 528
Score = 76 (31.8 bits), Expect = 1.7e-218, Sum P(3) = 1.7e-218
Identities = 42/175 (24%), Positives = 71/175 (40%)
Query: 38 IKSLPDFILPPAFPRETAESIKEHIEDKYLSMGLDTNEFSPEKVGRQWDFDWFEMAKVPL 97
+ P+ LP P A +++ E +LS E R+W K +
Sbjct: 35 VPGAPESTLPHGLP-PCAPDLQQEAERLFLSSPAWLPLHGVEHSAREWQ------RK--M 85
Query: 98 EP-SLAQSVVAPV-WEVPFRRQTKQGK-WEPNSVDVSELMLGAQDSGPLPRVAGPAKDFV 154
+P SL ++ APV ++ +R G+ V + L + S L R P +
Sbjct: 86 DPWSLLATLGAPVPSDLQAQRHPTTGQILGYKEVLLENTNLSSTTSLSLRRPPAPISQSL 145
Query: 155 RGSINSRPFRPGGLEDSQSLERILPDGASNGEWVQEILKGGPAQVVPPSFKQGLD 209
G+ PF PGG+++ + D ++ E +EI +PP FK+G+D
Sbjct: 146 WGNPTQYPFWPGGMDEPS-----ITDLSTREEAEEEIDFEKDLLTLPPGFKKGVD 195
>ASPGD|ASPL0000004985 [details] [associations]
symbol:AN6007 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000102 GO:GO:0008026 eggNOG:COG4581
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
RefSeq:XP_663611.1 ProteinModelPortal:Q5B0C3 STRING:Q5B0C3
EnsemblFungi:CADANIAT00007011 GeneID:2871132 KEGG:ani:AN6007.2
Uniprot:Q5B0C3
Length = 1293
Score = 886 (316.9 bits), Expect = 5.2e-218, Sum P(4) = 5.2e-218
Identities = 180/305 (59%), Positives = 217/305 (71%)
Query: 365 GGQQQKEAWVVSGSTEAIADRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHT 424
GG++ A VV + E FHELVPD+A ++PFELD FQKEA+Y+LENGDSVFVAAHT
Sbjct: 291 GGKEW--AHVVDVNKEI--SNFHELVPDMAREWPFELDTFQKEAVYHLENGDSVFVAAHT 346
Query: 425 SAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFSGKFD-VGLLTGDVSLRPEAS 483
SAGKTVVAEYA ALA KH T+A+YT+PIK +SNQK+RDF FD VG+LTGDV + PEAS
Sbjct: 347 SAGKTVVAEYAIALAAKHMTKAIYTSPIKALSNQKFRDFKNTFDDVGILTGDVQINPEAS 406
Query: 484 CLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLS 543
CLIMTTEILRSMLYRGAD+IRD+E+VIFDEVHYVND+ERGVVWEEVIIMLP H+ ++LLS
Sbjct: 407 CLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDLERGVVWEEVIIMLPEHVTLILLS 466
Query: 544 ATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGEFYKVCE-NEAFIPQGWKA 602
ATVPNT EFA W+GRTK+K I V T KRPVPLEH L+ + +K+ + N+ F+ GWK
Sbjct: 467 ATVPNTQEFASWVGRTKKKDIYVISTAKRPVPLEHYLWAGKDKFKIVDSNKRFLESGWKQ 526
Query: 603 AKDAYKRKNLXXXXXXXXXXXXXXXPRDGARAQKR-EHPNRGKQNKHSVVGIKNSGGSQN 661
A D K+ R G++ + R + P RG G + GG Q
Sbjct: 527 ADDIISGKDKIKAQKAAEAQAQSQASRGGSQGRGRGQAPARG--------GPRGGGGGQR 578
Query: 662 NWGLR 666
G R
Sbjct: 579 GGGQR 583
Score = 707 (253.9 bits), Expect = 5.2e-218, Sum P(4) = 5.2e-218
Identities = 160/359 (44%), Positives = 224/359 (62%)
Query: 629 RDGARAQKREHPNRGKQNKHSVVGIKNSGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPV 688
R G + + + NRG N + GG + + ++W+ ++ L K++LLP
Sbjct: 578 RGGGQRGRGQPANRGTGN----IARTGRGGGRTT---AAQDKTVWVQVVQHLRKENLLPA 630
Query: 689 VIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLR 748
IF FSK C++ AD +S D ++SEKS I + +K+ +RLK DR LPQI+R++ LL
Sbjct: 631 CIFVFSKKRCEQNADSLSNQDFCNASEKSLIHITIEKSLTRLKQEDRTLPQILRLRELLS 690
Query: 749 RGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGREF 808
RGIA+HH GLLPI+KE++E+LF + +VKVLF+TETFAMG+N P RTVVF RK DG+ F
Sbjct: 691 RGIAVHHGGLLPIMKEIVEILFAKTLVKVLFATETFAMGLNLPTRTVVFSGFRKHDGKGF 750
Query: 809 RQLLPGEYTQMAGRAGRRGLDKIGTVVVLC--RDEIPGESDLKHIIVGSATRLESQFRLT 866
R LLPGEYTQMAGRAGRRGLD +G V+V+ +DE P L+ +I+G T+L SQFRLT
Sbjct: 751 RDLLPGEYTQMAGRAGRRGLDNVGYVIVVNSGKDEAPPAGALRKMILGDPTKLRSQFRLT 810
Query: 867 YIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKTIECIKGEPA-- 924
Y MIL+LLRVE LK+E+M+KRSF+E +Q LPE ++ + A ++E IK EP
Sbjct: 811 YNMILNLLRVEALKIEEMIKRSFSENATQALLPEHEKQVQISEA----SLEKIKREPCEI 866
Query: 925 ----IEEYYDMYYEAEKYNNQITEAFMQS--AHQFLMPGRVLFVKSQTGQDHLLGAVVK 977
+ +D E K +++ + S + LMP R L V + G G +V+
Sbjct: 867 CDVDLAACHDASIEYGKLTSELHLNLLSSPVGKRLLMPKR-LVVYRKDGY-RTAGVIVR 923
Score = 571 (206.1 bits), Expect = 5.2e-218, Sum P(4) = 5.2e-218
Identities = 129/336 (38%), Positives = 200/336 (59%)
Query: 1046 PYHGAAAGVSYEVRGIDKKELLCICNCKIKIDQVGLLEDVSSAAFSKTVQQLLVLKSD-E 1104
P AA ++ +V I ++ C+ N +K+ ++ A ++L L S
Sbjct: 963 PLPTRAADMTLKVFKIPIADIECVTNTIVKLSGPTWYLNIKKEAIRFADKELSKLCSSWT 1022
Query: 1105 KKYPQALD--PVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEHMKLTKENKRH 1162
LD +K+L+L+D +++ + A + + C C K +H ++ ++ +
Sbjct: 1023 TPVWDELDWARIKELQLRD--ILDKRREQANIAQSC---DCLKCPKFLKHFEMQRDEWQI 1077
Query: 1163 KDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEELICT 1222
K+ ++ LK MSD+ LQ +PD++ RI VLK++G +D VQ+KG+VACE++S +EL+ T
Sbjct: 1078 KENISQLKQLMSDQNLQLLPDYEQRIQVLKDLGFVDEQSRVQLKGKVACEIHSADELVLT 1137
Query: 1223 ECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLYNTAIRLGELQAHF 1282
E + EN L + EPEE VA++SAFVFQ++ + P+L P+L KE + + ++ ++Q
Sbjct: 1138 ELILENVLAEYEPEEIVALLSAFVFQEKTENVPTLNPRLEKGKEAIIRISEKVNDVQIQH 1197
Query: 1283 KVQIDPEEYA--RDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCRE 1340
+V E+ +FGL EVVYEWAKG F I +LTDV EG IVRTI RLDETCRE
Sbjct: 1198 QVLQSTEDINDFASQPRFGLAEVVYEWAKGMSFNRITDLTDVMEGTIVRTITRLDETCRE 1257
Query: 1341 FRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
+NAA ++G+ LY KM+ A IKRD++FAASLY+
Sbjct: 1258 VKNAAKLVGDPTLYAKMQEAQEKIKRDVIFAASLYM 1293
Score = 94 (38.1 bits), Expect = 5.2e-218, Sum P(4) = 5.2e-218
Identities = 59/238 (24%), Positives = 109/238 (45%)
Query: 52 RETAESIKEHIEDKYLSMGLDTNEFSPE---KVGRQWDF--DWFEMAKVPLEPSLAQSVV 106
R +A ++ +E+++L+ + FS E ++ R+WD D+ ++ ++ A +
Sbjct: 45 RPSAAELRRDLENEFLT---PSPRFSSEWLNRLQRRWDVSTDYTDLFEI------ADTQT 95
Query: 107 APVWEVPFRRQTKQGKWEP-NSVDVSELMLGAQDSGPL-PRVAGPAKDFVRGSINSRPFR 164
+ V F R+ +G+ + V V A++S L R AG A DFVRG+ PF
Sbjct: 96 RTI--VRFDREGLEGRVTGYHEVTVPANSANAKNSTSLLRRPAGRA-DFVRGAAGFFPFA 152
Query: 165 PGGLEDSQSLERIL-------PDGASNGE-WVQEIL----KGGPAQVVPPSFKQGLDLGE 212
PGGL+ +++ + P G++ + + I+ +GG +V P F +GL E
Sbjct: 153 PGGLDGVEAIAEMEAEVQTAGPSGSAGKQAGLDRIINFASEGGLLEVAP-GFSRGLKFEE 211
Query: 213 LQAYPCLWNVYKDQDQSSLKSTSDEKLN---ELSVQFDDL--FKKAWEEDVAEFEKDD 265
++ D D+ ++ +E+ N E D+ K EE +E E++D
Sbjct: 212 AKSKEAA-----DDDEEVEQTLQEEESNINPEQDETASDVGGVKIEDEESASEDEEED 264
Score = 39 (18.8 bits), Expect = 6.7e-120, Sum P(3) = 6.7e-120
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K + FDD+
Sbjct: 372 SPIKALSNQKFRDFKNTFDDV 392
>UNIPROTKB|E2RSD6 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055087 "Ski complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 KO:K12599 OMA:TRLDETC GeneTree:ENSGT00690000102154
CTD:6499 EMBL:AAEX03008222 RefSeq:XP_538841.2
ProteinModelPortal:E2RSD6 Ensembl:ENSCAFT00000001053 GeneID:481720
KEGG:cfa:481720 NextBio:20856463 Uniprot:E2RSD6
Length = 1246
Score = 1263 (449.7 bits), Expect = 9.3e-216, Sum P(3) = 9.3e-216
Identities = 295/711 (41%), Positives = 430/711 (60%)
Query: 672 IWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLK 731
++L+L+ L ++ LPVV+F FS+ CD+ A G++ +DLT+SSEKSEI +F + +RL+
Sbjct: 553 VYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLR 612
Query: 732 GSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAP 791
GSDR LPQ++ + LL RG+ +HH+G+LPI+KE++EMLF RG+VKVLF+TETFAMGVN P
Sbjct: 613 GSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMP 672
Query: 792 ARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHI 851
ARTVVFD++RK DG FR LLPGEY QMAGRAGRRGLD GTV++LC+ +P +DL +
Sbjct: 673 ARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRM 732
Query: 852 IVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQ 911
++G ++L+SQFRLTY MIL+LLRV+ L+VEDM+KRSF+EF S+K +Q L +L +
Sbjct: 733 MMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQAL-DELTK 791
Query: 912 PPKTIE--CIKGEPA-IEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVKSQT 966
+E G+ + EYY E + + I M+S + + L GRV+ VK+Q
Sbjct: 792 RLGALEEPDTTGQLVDLSEYYGWGEELTETRSLIQRRIMESVNGLKSLSAGRVVVVKNQE 851
Query: 967 GQDHLLGAVVKAPSANNKEYIVMLLKPDLPSASETSLDKKSGDFSEGYFVIPKSKRGLEE 1026
+ LG +++ S + L+ D P SE ++ Y P G +
Sbjct: 852 -YHNTLGVILQVSSNSASRVFTTLVLCDKP-VSEDPQERAPATPDVPY---PDDLVGFKL 906
Query: 1027 EYC-GSVSHRKGSGVINIKLPYHGAAAGVSYEVRGIDKKELLCICNCKIKIDQVGLLEDV 1085
G H V ++ P G A ++ +V ++ +++L + K Q +D
Sbjct: 907 FLPEGPCDHT----VAKLQ-P--GDVATITTKVLRVNGEKILEDFS---KRQQPKFKKDP 956
Query: 1086 SSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKC-H 1144
AA + VQ+LL L P LDPV DL+LKD+++VE + L + +C H
Sbjct: 957 PIAAVTTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIWGAQCVH 1016
Query: 1145 GCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADLVVQ 1204
+++KL +E + + E+ L+F +SD++L +P++ R++VL+ +G +D V+
Sbjct: 1017 SPRFSAQYVKL-RERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVK 1075
Query: 1205 IKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVA 1264
+ GRVAC M+S EL+ TE +F+N L L PEE A++S V Q L L
Sbjct: 1076 LAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGEQLPSTLKQG 1134
Query: 1265 KERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPE 1324
ER+ A R+GE+Q + EE+ + L FGLVEVVYEWA+G PF+++ L+ PE
Sbjct: 1135 VERVRAVARRIGEVQVACGLNQTVEEFVGE-LNFGLVEVVYEWARGMPFSELAGLSGTPE 1193
Query: 1325 GLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLY 1375
GL+VR I RL E CR R AA ++G L KMETA+ ++RDIVFAASLY
Sbjct: 1194 GLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244
Score = 773 (277.2 bits), Expect = 9.3e-216, Sum P(3) = 9.3e-216
Identities = 155/250 (62%), Positives = 188/250 (75%)
Query: 370 KEAWVVSGS-TEAIADRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGK 428
+E W + T + D F+ L+P A + FE D FQK+AI +LE DSVFVAAHTSAGK
Sbjct: 280 QEQWAIPVDVTSPVGD-FYRLIPQPAFQWSFEPDVFQKQAILHLERHDSVFVAAHTSAGK 338
Query: 429 TVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIM 487
TVVAEYA ALA KH TR +YT+PIK +SNQK+RDF F DVGLLTGDV L PEASCLIM
Sbjct: 339 TVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIM 398
Query: 488 TTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVP 547
TTEILRSMLY G+D+IRD+EWVIFDEVHY+ND ERGVVWEEV+IMLP H++I+LLSATVP
Sbjct: 399 TTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVP 458
Query: 548 NTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYS------GEFYKVCENE-AFIPQGW 600
N +EFADWIGR K+++I V T RPVPLEH L+ GE + + ++ AF +G+
Sbjct: 459 NALEFADWIGRLKRRQIYVISTVARPVPLEHYLFTGNSPKTQGELFLLLDSRGAFHTKGY 518
Query: 601 KAAKDAYKRK 610
AA +A K +
Sbjct: 519 YAAVEAKKER 528
Score = 88 (36.0 bits), Expect = 9.3e-216, Sum P(3) = 9.3e-216
Identities = 46/175 (26%), Positives = 72/175 (41%)
Query: 38 IKSLPDFILPPAFPRETAESIKEHIEDKYLSMGLDTNEFSPEKVGRQWDFDWFEMAKVPL 97
+ P+ LP P A +++ E +LS E R+W K +
Sbjct: 35 VPGAPESTLPHGLP-PCAPDLQQEAEQLFLSSPAWLPLHGVEHSVRKWQ------RK--M 85
Query: 98 EP-SLAQSVVAPV-WEVPFRRQTKQGK-WEPNSVDVSELMLGAQDSGPLPRVAGPAKDFV 154
+P SL ++ APV ++ +R G+ V + L A S L R GP +
Sbjct: 86 DPWSLLATLGAPVPSDLQAQRHPNTGQILGYKEVLLENTNLSATTSLSLRRPPGPISQSL 145
Query: 155 RGSINSRPFRPGGLEDSQSLERILPDGASNGEWVQEILKGGPAQVVPPSFKQGLD 209
G+ PF PGG++ E + D ++ E +EI VPP FK+G+D
Sbjct: 146 WGNPTQYPFWPGGMD-----EPTITDLSTREEAEEEIDFEQDLLTVPPGFKKGVD 195
Score = 38 (18.4 bits), Expect = 1.6e-130, Sum P(2) = 1.6e-130
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 635 QKREHPNRGKQNKHSVVGIKNSG-GSQNNWGLRR 667
Q + HPN G+ + V ++N+ + + LRR
Sbjct: 103 QAQRHPNTGQILGYKEVLLENTNLSATTSLSLRR 136
>UNIPROTKB|B4DM01 [details] [associations]
symbol:SKIV2L "cDNA FLJ57529, highly similar to Helicase
SKI2W (EC 3.6.1.-)" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 eggNOG:COG4581
InterPro:IPR025696 Pfam:PF13234 UniGene:Hs.89864 HGNC:HGNC:10898
HOVERGEN:HBG060025 OrthoDB:EOG47H5P5 ChiTaRS:SKIV2L EMBL:AK297230
IPI:IPI01014021 SMR:B4DM01 STRING:B4DM01 Ensembl:ENST00000551164
Uniprot:B4DM01
Length = 1088
Score = 1288 (458.5 bits), Expect = 5.1e-215, Sum P(3) = 5.1e-215
Identities = 299/714 (41%), Positives = 434/714 (60%)
Query: 672 IWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLK 731
++L+L+ L ++ LPVV+F FS+ CD+ A G++ +DLT+SSEKSEI +F + +RL+
Sbjct: 395 VYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLR 454
Query: 732 GSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAP 791
GSDR LPQ++ + LL RG+ +HH+G+LPI+KE++EMLF RG+VKVLF+TETFAMGVN P
Sbjct: 455 GSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMP 514
Query: 792 ARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHI 851
ARTVVFD++RK DG FR LLPGEY QMAGRAGRRGLD GTV++LC+ +P +DL +
Sbjct: 515 ARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRM 574
Query: 852 IVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQK--KLPEQQ--QLLMR 907
++G ++L+SQFRLTY MIL+LLRV+ L+VEDM+KRSF+EF S+K K EQ +L R
Sbjct: 575 MMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAELTKR 634
Query: 908 --KLAQPPKTIECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVK 963
L +P T + + + EYY E + + I M+S + + L GRV+ VK
Sbjct: 635 LGALEEPDMTGQLVD----LPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVVVK 690
Query: 964 SQTGQDHLLGAVVKAPSANNKEYIVMLLKPDLPSASETSLDKKSGDFSEGYFVIPKSKRG 1023
+Q + LG +++ S + L+ D P S+ D+ Y P G
Sbjct: 691 NQE-HHNALGVILQVSSNSTSRVFTTLVLCDKP-LSQDPQDRGPATAEVPY---PDDLVG 745
Query: 1024 LEEEYC-GSVSHRKGSGVINIKLPYHGAAAGVSYEVRGIDKKELLCICNCKIKIDQVGLL 1082
+ G H V+ ++ P G A ++ +V ++ +++L + K Q
Sbjct: 746 FKLFLPEGPCDHT----VVKLQ-P--GDMAAITTKVLRVNGEKILEDFS---KRQQPKFK 795
Query: 1083 EDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAANK 1142
+D AA + VQ+LL L P LDPV DL+LKDM++VE + L + +
Sbjct: 796 KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQ 855
Query: 1143 C-HGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADL 1201
C H +++KL +E + + E+ L+F +SD++L +P++ R++VL+ +G +D
Sbjct: 856 CVHSPRFPAQYLKL-RERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAG 914
Query: 1202 VVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKL 1261
V++ GRVAC M+S EL+ TE +F+N L L PEE A++S V Q + L L
Sbjct: 915 TVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTL 973
Query: 1262 SVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTD 1321
ER+ A R+GE+Q + EE+ + L FGLVEVVYEWA+G PF+++ L+
Sbjct: 974 KQGIERVRAVAKRIGEVQVACGLNQTVEEFVGE-LNFGLVEVVYEWARGMPFSELAGLSG 1032
Query: 1322 VPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLY 1375
PEGL+VR I RL E CR R AA ++G L KMETA+ ++RDIVFAASLY
Sbjct: 1033 TPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1086
Score = 786 (281.7 bits), Expect = 5.1e-215, Sum P(3) = 5.1e-215
Identities = 160/279 (57%), Positives = 201/279 (72%)
Query: 341 ADLSVLDEILSVKSGGTTSILDDGGGQQQKEAWVVS-GSTEAIADRFHELVPDLALDFPF 399
A S L++++ +K T + +E W + +T + D F+ L+P A + F
Sbjct: 94 ARASSLEDLV-LKEASTAVSTPEAPEPPSQEQWAIPVDATSPVGD-FYRLIPQPAFQWAF 151
Query: 400 ELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQK 459
E D FQK+AI +LE DSVFVAAHTSAGKTVVAEYA ALA KH TR +YT+PIK +SNQK
Sbjct: 152 EPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQK 211
Query: 460 YRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVN 518
+RDF F DVGLLTGDV L PEASCLIMTTEILRSMLY G+D+IRD+EWVIFDEVHY+N
Sbjct: 212 FRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYIN 271
Query: 519 DIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEH 578
D+ERGVVWEEV+IMLP H++I+LLSATVPN +EFADWIGR K+++I V T RPVPLEH
Sbjct: 272 DVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEH 331
Query: 579 CLYYS------GEFYKVCENE-AFIPQGWKAAKDAYKRK 610
L+ GE + + ++ AF +G+ AA +A K +
Sbjct: 332 YLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKER 370
Score = 43 (20.2 bits), Expect = 5.1e-215, Sum P(3) = 5.1e-215
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 200 VPPSFKQGLD 209
+PP FK+G+D
Sbjct: 28 IPPGFKKGMD 37
>UNIPROTKB|F8VNU1 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI01022196
SMR:F8VNU1 Ensembl:ENST00000546742 Ensembl:ENST00000547054
Ensembl:ENST00000550012 Ensembl:ENST00000550640 UCSC:uc011ghk.1
Uniprot:F8VNU1
Length = 1088
Score = 1288 (458.5 bits), Expect = 5.1e-215, Sum P(3) = 5.1e-215
Identities = 299/714 (41%), Positives = 434/714 (60%)
Query: 672 IWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLK 731
++L+L+ L ++ LPVV+F FS+ CD+ A G++ +DLT+SSEKSEI +F + +RL+
Sbjct: 395 VYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLR 454
Query: 732 GSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAP 791
GSDR LPQ++ + LL RG+ +HH+G+LPI+KE++EMLF RG+VKVLF+TETFAMGVN P
Sbjct: 455 GSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMP 514
Query: 792 ARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHI 851
ARTVVFD++RK DG FR LLPGEY QMAGRAGRRGLD GTV++LC+ +P +DL +
Sbjct: 515 ARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRM 574
Query: 852 IVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQK--KLPEQQ--QLLMR 907
++G ++L+SQFRLTY MIL+LLRV+ L+VEDM+KRSF+EF S+K K EQ +L R
Sbjct: 575 MMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAELTKR 634
Query: 908 --KLAQPPKTIECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVK 963
L +P T + + + EYY E + + I M+S + + L GRV+ VK
Sbjct: 635 LGALEEPDMTGQLVD----LPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVVVK 690
Query: 964 SQTGQDHLLGAVVKAPSANNKEYIVMLLKPDLPSASETSLDKKSGDFSEGYFVIPKSKRG 1023
+Q + LG +++ S + L+ D P S+ D+ Y P G
Sbjct: 691 NQE-HHNALGVILQVSSNSTSRVFTTLVLCDKP-LSQDPQDRGPATAEVPY---PDDLVG 745
Query: 1024 LEEEYC-GSVSHRKGSGVINIKLPYHGAAAGVSYEVRGIDKKELLCICNCKIKIDQVGLL 1082
+ G H V+ ++ P G A ++ +V ++ +++L + K Q
Sbjct: 746 FKLFLPEGPCDHT----VVKLQ-P--GDMAAITTKVLRVNGEKILEDFS---KRQQPKFK 795
Query: 1083 EDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAANK 1142
+D AA + VQ+LL L P LDPV DL+LKDM++VE + L + +
Sbjct: 796 KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQ 855
Query: 1143 C-HGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADL 1201
C H +++KL +E + + E+ L+F +SD++L +P++ R++VL+ +G +D
Sbjct: 856 CVHSPRFPAQYLKL-RERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAG 914
Query: 1202 VVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKL 1261
V++ GRVAC M+S EL+ TE +F+N L L PEE A++S V Q + L L
Sbjct: 915 TVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTL 973
Query: 1262 SVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTD 1321
ER+ A R+GE+Q + EE+ + L FGLVEVVYEWA+G PF+++ L+
Sbjct: 974 KQGIERVRAVAKRIGEVQVACGLNQTVEEFVGE-LNFGLVEVVYEWARGMPFSELAGLSG 1032
Query: 1322 VPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLY 1375
PEGL+VR I RL E CR R AA ++G L KMETA+ ++RDIVFAASLY
Sbjct: 1033 TPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1086
Score = 786 (281.7 bits), Expect = 5.1e-215, Sum P(3) = 5.1e-215
Identities = 160/279 (57%), Positives = 201/279 (72%)
Query: 341 ADLSVLDEILSVKSGGTTSILDDGGGQQQKEAWVVS-GSTEAIADRFHELVPDLALDFPF 399
A S L++++ +K T + +E W + +T + D F+ L+P A + F
Sbjct: 94 ARASSLEDLV-LKEASTAVSTPEAPEPPSQEQWAIPVDATSPVGD-FYRLIPQPAFQWAF 151
Query: 400 ELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQK 459
E D FQK+AI +LE DSVFVAAHTSAGKTVVAEYA ALA KH TR +YT+PIK +SNQK
Sbjct: 152 EPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQK 211
Query: 460 YRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVN 518
+RDF F DVGLLTGDV L PEASCLIMTTEILRSMLY G+D+IRD+EWVIFDEVHY+N
Sbjct: 212 FRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYIN 271
Query: 519 DIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEH 578
D+ERGVVWEEV+IMLP H++I+LLSATVPN +EFADWIGR K+++I V T RPVPLEH
Sbjct: 272 DVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEH 331
Query: 579 CLYYS------GEFYKVCENE-AFIPQGWKAAKDAYKRK 610
L+ GE + + ++ AF +G+ AA +A K +
Sbjct: 332 YLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKER 370
Score = 43 (20.2 bits), Expect = 5.1e-215, Sum P(3) = 5.1e-215
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 200 VPPSFKQGLD 209
+PP FK+G+D
Sbjct: 28 IPPGFKKGMD 37
>UNIPROTKB|F5H7B0 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 EMBL:AL645922
InterPro:IPR025696 Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L
IPI:IPI01021910 SMR:F5H7B0 Ensembl:ENST00000544581
Ensembl:ENST00000546549 Uniprot:F5H7B0
Length = 1053
Score = 1288 (458.5 bits), Expect = 3.1e-212, Sum P(2) = 3.1e-212
Identities = 299/714 (41%), Positives = 434/714 (60%)
Query: 672 IWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLK 731
++L+L+ L ++ LPVV+F FS+ CD+ A G++ +DLT+SSEKSEI +F + +RL+
Sbjct: 360 VYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLR 419
Query: 732 GSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAP 791
GSDR LPQ++ + LL RG+ +HH+G+LPI+KE++EMLF RG+VKVLF+TETFAMGVN P
Sbjct: 420 GSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMP 479
Query: 792 ARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHI 851
ARTVVFD++RK DG FR LLPGEY QMAGRAGRRGLD GTV++LC+ +P +DL +
Sbjct: 480 ARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRM 539
Query: 852 IVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQK--KLPEQQ--QLLMR 907
++G ++L+SQFRLTY MIL+LLRV+ L+VEDM+KRSF+EF S+K K EQ +L R
Sbjct: 540 MMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAELTKR 599
Query: 908 --KLAQPPKTIECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVK 963
L +P T + + + EYY E + + I M+S + + L GRV+ VK
Sbjct: 600 LGALEEPDMTGQLVD----LPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVVVK 655
Query: 964 SQTGQDHLLGAVVKAPSANNKEYIVMLLKPDLPSASETSLDKKSGDFSEGYFVIPKSKRG 1023
+Q + LG +++ S + L+ D P S+ D+ Y P G
Sbjct: 656 NQE-HHNALGVILQVSSNSTSRVFTTLVLCDKP-LSQDPQDRGPATAEVPY---PDDLVG 710
Query: 1024 LEEEYC-GSVSHRKGSGVINIKLPYHGAAAGVSYEVRGIDKKELLCICNCKIKIDQVGLL 1082
+ G H V+ ++ P G A ++ +V ++ +++L + K Q
Sbjct: 711 FKLFLPEGPCDHT----VVKLQ-P--GDMAAITTKVLRVNGEKILEDFS---KRQQPKFK 760
Query: 1083 EDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAANK 1142
+D AA + VQ+LL L P LDPV DL+LKDM++VE + L + +
Sbjct: 761 KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQ 820
Query: 1143 C-HGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADL 1201
C H +++KL +E + + E+ L+F +SD++L +P++ R++VL+ +G +D
Sbjct: 821 CVHSPRFPAQYLKL-RERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAG 879
Query: 1202 VVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKL 1261
V++ GRVAC M+S EL+ TE +F+N L L PEE A++S V Q + L L
Sbjct: 880 TVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTL 938
Query: 1262 SVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTD 1321
ER+ A R+GE+Q + EE+ + L FGLVEVVYEWA+G PF+++ L+
Sbjct: 939 KQGIERVRAVAKRIGEVQVACGLNQTVEEFVGE-LNFGLVEVVYEWARGMPFSELAGLSG 997
Query: 1322 VPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLY 1375
PEGL+VR I RL E CR R AA ++G L KMETA+ ++RDIVFAASLY
Sbjct: 998 TPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1051
Score = 786 (281.7 bits), Expect = 3.1e-212, Sum P(2) = 3.1e-212
Identities = 160/279 (57%), Positives = 201/279 (72%)
Query: 341 ADLSVLDEILSVKSGGTTSILDDGGGQQQKEAWVVS-GSTEAIADRFHELVPDLALDFPF 399
A S L++++ +K T + +E W + +T + D F+ L+P A + F
Sbjct: 59 ARASSLEDLV-LKEASTAVSTPEAPEPPSQEQWAIPVDATSPVGD-FYRLIPQPAFQWAF 116
Query: 400 ELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQK 459
E D FQK+AI +LE DSVFVAAHTSAGKTVVAEYA ALA KH TR +YT+PIK +SNQK
Sbjct: 117 EPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQK 176
Query: 460 YRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVN 518
+RDF F DVGLLTGDV L PEASCLIMTTEILRSMLY G+D+IRD+EWVIFDEVHY+N
Sbjct: 177 FRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYIN 236
Query: 519 DIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEH 578
D+ERGVVWEEV+IMLP H++I+LLSATVPN +EFADWIGR K+++I V T RPVPLEH
Sbjct: 237 DVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEH 296
Query: 579 CLYYS------GEFYKVCENE-AFIPQGWKAAKDAYKRK 610
L+ GE + + ++ AF +G+ AA +A K +
Sbjct: 297 YLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKER 335
>UNIPROTKB|F8VS23 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00945125
SMR:F8VS23 Ensembl:ENST00000546908 Ensembl:ENST00000552714
Ensembl:ENST00000552746 Ensembl:ENST00000553255 UCSC:uc011ghl.1
Uniprot:F8VS23
Length = 1053
Score = 1288 (458.5 bits), Expect = 3.1e-212, Sum P(2) = 3.1e-212
Identities = 299/714 (41%), Positives = 434/714 (60%)
Query: 672 IWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLK 731
++L+L+ L ++ LPVV+F FS+ CD+ A G++ +DLT+SSEKSEI +F + +RL+
Sbjct: 360 VYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLR 419
Query: 732 GSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAP 791
GSDR LPQ++ + LL RG+ +HH+G+LPI+KE++EMLF RG+VKVLF+TETFAMGVN P
Sbjct: 420 GSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMP 479
Query: 792 ARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHI 851
ARTVVFD++RK DG FR LLPGEY QMAGRAGRRGLD GTV++LC+ +P +DL +
Sbjct: 480 ARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRM 539
Query: 852 IVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQK--KLPEQQ--QLLMR 907
++G ++L+SQFRLTY MIL+LLRV+ L+VEDM+KRSF+EF S+K K EQ +L R
Sbjct: 540 MMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAELTKR 599
Query: 908 --KLAQPPKTIECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVK 963
L +P T + + + EYY E + + I M+S + + L GRV+ VK
Sbjct: 600 LGALEEPDMTGQLVD----LPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVVVK 655
Query: 964 SQTGQDHLLGAVVKAPSANNKEYIVMLLKPDLPSASETSLDKKSGDFSEGYFVIPKSKRG 1023
+Q + LG +++ S + L+ D P S+ D+ Y P G
Sbjct: 656 NQE-HHNALGVILQVSSNSTSRVFTTLVLCDKP-LSQDPQDRGPATAEVPY---PDDLVG 710
Query: 1024 LEEEYC-GSVSHRKGSGVINIKLPYHGAAAGVSYEVRGIDKKELLCICNCKIKIDQVGLL 1082
+ G H V+ ++ P G A ++ +V ++ +++L + K Q
Sbjct: 711 FKLFLPEGPCDHT----VVKLQ-P--GDMAAITTKVLRVNGEKILEDFS---KRQQPKFK 760
Query: 1083 EDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAANK 1142
+D AA + VQ+LL L P LDPV DL+LKDM++VE + L + +
Sbjct: 761 KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQ 820
Query: 1143 C-HGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADL 1201
C H +++KL +E + + E+ L+F +SD++L +P++ R++VL+ +G +D
Sbjct: 821 CVHSPRFPAQYLKL-RERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAG 879
Query: 1202 VVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKL 1261
V++ GRVAC M+S EL+ TE +F+N L L PEE A++S V Q + L L
Sbjct: 880 TVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTL 938
Query: 1262 SVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTD 1321
ER+ A R+GE+Q + EE+ + L FGLVEVVYEWA+G PF+++ L+
Sbjct: 939 KQGIERVRAVAKRIGEVQVACGLNQTVEEFVGE-LNFGLVEVVYEWARGMPFSELAGLSG 997
Query: 1322 VPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLY 1375
PEGL+VR I RL E CR R AA ++G L KMETA+ ++RDIVFAASLY
Sbjct: 998 TPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1051
Score = 786 (281.7 bits), Expect = 3.1e-212, Sum P(2) = 3.1e-212
Identities = 160/279 (57%), Positives = 201/279 (72%)
Query: 341 ADLSVLDEILSVKSGGTTSILDDGGGQQQKEAWVVS-GSTEAIADRFHELVPDLALDFPF 399
A S L++++ +K T + +E W + +T + D F+ L+P A + F
Sbjct: 59 ARASSLEDLV-LKEASTAVSTPEAPEPPSQEQWAIPVDATSPVGD-FYRLIPQPAFQWAF 116
Query: 400 ELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQK 459
E D FQK+AI +LE DSVFVAAHTSAGKTVVAEYA ALA KH TR +YT+PIK +SNQK
Sbjct: 117 EPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQK 176
Query: 460 YRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVN 518
+RDF F DVGLLTGDV L PEASCLIMTTEILRSMLY G+D+IRD+EWVIFDEVHY+N
Sbjct: 177 FRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYIN 236
Query: 519 DIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEH 578
D+ERGVVWEEV+IMLP H++I+LLSATVPN +EFADWIGR K+++I V T RPVPLEH
Sbjct: 237 DVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEH 296
Query: 579 CLYYS------GEFYKVCENE-AFIPQGWKAAKDAYKRK 610
L+ GE + + ++ AF +G+ AA +A K +
Sbjct: 297 YLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKER 335
>CGD|CAL0002171 [details] [associations]
symbol:orf19.6425 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0055087 "Ski complex" evidence=IEA]
[GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
exonucleolytic nonsense-mediated decay" evidence=IEA] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0002171 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000073
EMBL:AACQ01000072 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG4581 KO:K12599 RefSeq:XP_716180.1
RefSeq:XP_716263.1 ProteinModelPortal:Q5A337 STRING:Q5A337
GeneID:3642143 GeneID:3642220 KEGG:cal:CaO19.13783
KEGG:cal:CaO19.6425 Uniprot:Q5A337
Length = 1245
Score = 1522 (540.8 bits), Expect = 2.2e-210, Sum P(3) = 2.2e-210
Identities = 336/699 (48%), Positives = 444/699 (63%)
Query: 323 IDSD-AEGKTTVGFNSVKEADLSVLDEILSVKSGGTTSILDDGGGQQQKEAWV-VSGSTE 380
+D D ++ K TV F++ KE + V + + K + LD K W V
Sbjct: 219 LDGDVSKPKPTVPFDN-KEIEGLVPFDYSNFKYTDKKNALD-------KRTWAHVVDLDH 270
Query: 381 AIADRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALAT 440
I D F ELVP++A +PFELD FQKEA+++LE GDSVFVAAHTSAGKTVVAEYA A+A
Sbjct: 271 KIED-FQELVPNMARTWPFELDTFQKEAVFHLEQGDSVFVAAHTSAGKTVVAEYAIAMAH 329
Query: 441 KHCTRAVYTAPIKTISNQKYRDFSGKF---DVGLLTGDVSLRPEASCLIMTTEILRSMLY 497
++ T+ +YT+PIK +SNQK+RDF F DVGL+TGDV + PEA+CLIMTTEILRSMLY
Sbjct: 330 RNMTKCIYTSPIKALSNQKFRDFKETFKDIDVGLITGDVQINPEANCLIMTTEILRSMLY 389
Query: 498 RGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIG 557
RGAD+IRD+E+VIFDEVHYVNDI+RGVVWEEVIIMLP H+ +LLSATVPNT EFA+W+G
Sbjct: 390 RGADLIRDVEFVIFDEVHYVNDIDRGVVWEEVIIMLPDHVKYILLSATVPNTFEFANWVG 449
Query: 558 RTKQKKIRVTGTTKRPVPLEHCLYYSGEFYKVCE-NEAFIPQGWKAAKDAYK---RKNLX 613
RTKQK I V T KRPVPLE + + +KV + N F ++ KD + +KN
Sbjct: 450 RTKQKDIYVISTPKRPVPLEIFVSAKNQLFKVVDANRRFQENEFRKHKDLLEGGGKKN-- 507
Query: 614 XXXXXXXXXXXXXXPRDGARAQKRE-HPNRGKQNKHSVVGIKNSGGSQNNWGLRRSEVSI 672
P AR R RG Q + N G + +G + +
Sbjct: 508 ELPSTTMGSGSRGGPGGTARGGNRGGRGGRGGQGRGGNANRGNFSGPKR-FGRDGPKKNT 566
Query: 673 WLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKG 732
W+ L+N + +LLP V+F FSK C++ AD + +D ++ EKSEI +F D+A RLK
Sbjct: 567 WIDLVNYMKSNNLLPAVVFVFSKKRCEEYADSLRSVDFNNAREKSEIHMFIDRAVGRLKK 626
Query: 733 SDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPA 792
DR LPQI++++ +L RGIA+HH GLLPIVKE IE+LF + +VKVLF+TETFAMG+N P
Sbjct: 627 EDRELPQILKIREMLGRGIAVHHGGLLPIVKECIEILFAKSLVKVLFATETFAMGLNLPT 686
Query: 793 RTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHII 852
RTV+F ++RK DGR FR LLPGE+TQM+GRAGRRGLDK GTV+V+ D+ +D K ++
Sbjct: 687 RTVIFSSMRKHDGRSFRNLLPGEFTQMSGRAGRRGLDKTGTVIVMAYDDPLSPTDFKEVV 746
Query: 853 VGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLL--MRKLA 910
+G+ T+L SQFRLTY MIL+LLR+E LKVE+M+K SF+E +Q LPE Q+ ++K
Sbjct: 747 LGTPTKLSSQFRLTYSMILNLLRIEALKVEEMIKHSFSENSTQVLLPENQKRYDEIKKQL 806
Query: 911 QPPKTIECIKGE-PAIEEYYDMYYEAEK-YNNQITEAFMQSA--HQFLMPGRVLFVKSQT 966
Q C K EE ++ E E Y + + Q L GR++ +
Sbjct: 807 QSSTITPCSKCSLEGTEETCNLLTEYENLYGECVVDIHKSPVLKSQLLRVGRLVCFRDVN 866
Query: 967 GQDHLLGAVVKAPSANNKEYIVMLLKPDLPSASETSLDK 1005
+G VVK+ SANN ++LL D E +++K
Sbjct: 867 HNGARMGFVVKSDSANNA---IVLLTFDHGKDYEEAIEK 902
Score = 481 (174.4 bits), Expect = 2.2e-210, Sum P(3) = 2.2e-210
Identities = 117/317 (36%), Positives = 176/317 (55%)
Query: 1065 ELLC-ICNCKIKIDQVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQ-ALDPVKDLKLKDM 1122
E +C I +K ++ + SA + +Q+ +L + + + A + L L D+
Sbjct: 935 ENICFIGRYSLKTSVNSIINNEKSAV-QEASEQIQILTKYQNSFEELAFKFTRQLSLHDL 993
Query: 1123 NLVEAYYKWAGLLRKMAANKCHGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMP 1182
+ + LL K+ ++K + C +H + EV L+ +SDE L+ +P
Sbjct: 994 TVEKDQ-----LLEKLKSSKAYVCPNFRQHYVEYLDRYLLSQEVEKLERLISDENLELLP 1048
Query: 1183 DFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIM 1242
D++ R+ VL+ +G ID V +KGRVACE+NSG ELI TE + N L D EP E VA++
Sbjct: 1049 DYEQRLQVLEAMGYIDEQHNVVLKGRVACEVNSGWELIITELVLNNFLGDFEPAEIVALL 1108
Query: 1243 SAFVFQQRNTSE--PSLTPKLSVAKERLYNTAIRLGELQAHFKVQIDPEEYAR-DNLKFG 1299
S FV++ R E P +TP+L K ++ A +L ++ +V + EE ++ +F
Sbjct: 1109 SCFVYEGRTQEEEPPLITPRLEKGKAKILEIAEKLLKVYVEKQVSLTSEEEDFVESKRFA 1168
Query: 1300 LVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMET 1359
L VVYEWA G F +I +++ EG IVR I RLDE CRE +NAA I+G+S L+ KM
Sbjct: 1169 LANVVYEWANGLSFNEIMQISVEAEGTIVRVITRLDEICREVKNAALIIGDSTLHLKMVE 1228
Query: 1360 ASNAIKRDIVFAASLYI 1376
A IKRDIVF ASLY+
Sbjct: 1229 AQEKIKRDIVFCASLYL 1245
Score = 70 (29.7 bits), Expect = 2.2e-210, Sum P(3) = 2.2e-210
Identities = 33/132 (25%), Positives = 57/132 (43%)
Query: 128 VDVSELMLGAQDSGPLPRVAGPAKDFVRGSINSRPFRPGGLEDSQSLERILPDGASNGEW 187
V+++EL + S + R + +RG+ + PF+PGGL + ER D N
Sbjct: 100 VNLNELE-NSNTSLSINRGYSSKSESLRGNTSFLPFQPGGLIQQAATEREPKDSGLNLHR 158
Query: 188 VQEILKGGPAQVVPPSFKQGLDLG-------ELQAYPCLWNVYKDQDQS-SLKSTSDEKL 239
+ L +PP F +GL++G L P KD + + + S+ L
Sbjct: 159 NEHGLFD-----IPPGFVRGLEVGGGGSGSGSLDIEPASSEEEKDSLEGVHISAASEAAL 213
Query: 240 NELSVQFDDLFK 251
N+ ++ D+ K
Sbjct: 214 NKSTILDGDVSK 225
Score = 38 (18.4 bits), Expect = 6.4e-40, Sum P(2) = 6.4e-40
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 505 DIEWVIFDEVHYVNDIERGVVWEEVII 531
+I W I D V+ +I R + ++++I
Sbjct: 46 EINWEILDLVNKPLEINREKIIDKLVI 72
>SGD|S000004390 [details] [associations]
symbol:SKI2 "Ski complex component and putative RNA helicase"
species:4932 "Saccharomyces cerevisiae" [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0070478
"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
nonsense-mediated decay" evidence=IGI;IMP] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA;IPI] [GO:0034427 "nuclear-transcribed mRNA
catabolic process, exonucleolytic, 3'-5'" evidence=IMP] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 SGD:S000004390 GO:GO:0005524
GO:GO:0006417 GO:GO:0003677 EMBL:BK006945 GO:GO:0051607
GO:GO:0003723 EMBL:U19729 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:Z18944 EMBL:L13469 GO:GO:0008026 GO:GO:0003724
GO:GO:0070478 GO:GO:0070481 eggNOG:COG4581 KO:K05544
RefSeq:NP_013505.4 GeneID:851117 KEGG:sce:YLR401C
InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087 HOGENOM:HOG000163048
KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R PIR:S55954
RefSeq:NP_013502.3 PDB:4A4K PDB:4A4Z PDBsum:4A4K PDBsum:4A4Z
ProteinModelPortal:P35207 SMR:P35207 DIP:DIP-5887N IntAct:P35207
MINT:MINT-662639 STRING:P35207 PaxDb:P35207 PeptideAtlas:P35207
EnsemblFungi:YLR398C GeneID:851114 KEGG:sce:YLR398C CYGD:YLR398c
GeneTree:ENSGT00690000102154 NextBio:967830 Genevestigator:P35207
GermOnline:YLR398C Uniprot:P35207
Length = 1287
Score = 1443 (513.0 bits), Expect = 2.4e-198, Sum P(3) = 2.4e-198
Identities = 322/705 (45%), Positives = 444/705 (62%)
Query: 321 ESIDSDAEGKTTVGFNSVKEADLSVLDEILSVKSG-GTTSILDDGGGQQQKEAWVVSGST 379
E I +A +TT AD + +DE+L + G T + +++ A VV +
Sbjct: 256 EEIMEEATEETTAD-----NADDAEIDELLPIGIDFGRTKPVSKSVPVKKEWAHVVDLNH 310
Query: 380 EAIADRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALA 439
+ + F EL+P+ A +PFELD FQKEA+Y+LE GDSVFVAAHTSAGKTVVAEYA A+A
Sbjct: 311 KI--ENFDELIPNPARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMA 368
Query: 440 TKHCTRAVYTAPIKTISNQKYRDFSGKFD---VGLLTGDVSLRPEASCLIMTTEILRSML 496
++ T+ +YT+PIK +SNQK+RDF FD +GL+TGDV + P+A+CLIMTTEILRSML
Sbjct: 369 HRNMTKTIYTSPIKALSNQKFRDFKETFDDVNIGLITGDVQINPDANCLIMTTEILRSML 428
Query: 497 YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWI 556
YRGAD+IRD+E+VIFDEVHYVND +RGVVWEEVIIMLP+H+ +LLSATVPNT EFA+WI
Sbjct: 429 YRGADLIRDVEFVIFDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWI 488
Query: 557 GRTKQKKIRVTGTTKRPVPLEHCLYYSGEFYKVC-ENEAFIPQGWKAAKDAYKRKNLXXX 615
GRTKQK I V T KRPVPLE ++ E V +N F+ ++ K+ ++
Sbjct: 489 GRTKQKNIYVISTPKRPVPLEINIWAKKELIPVINQNSEFLEANFRKHKEILNGESAKGA 548
Query: 616 XXXXXXXXXXXXPRDGARAQKREHPNRGKQNKHSVVGIKNSGGSQNNWGL---RRS---- 668
R G R RG + +S G N GGS+ + +R
Sbjct: 549 PSKTDNGRGGSTAR-GGRGGSNTRDGRGGRG-NSTRGGANRGGSRGAGAIGSNKRKFFTQ 606
Query: 669 ---EVSIWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDK 725
W ++N L K+ LLP+V+F FSK C++ AD + GI+ ++ EKS+I +F +K
Sbjct: 607 DGPSKKTWPEIVNYLRKRELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFIEK 666
Query: 726 AFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFA 785
+ +RLK DR+LPQI++ +SLL RGIA+HH GLLPIVKE+IE+LF +G +KVLF+TETFA
Sbjct: 667 SITRLKKEDRDLPQILKTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFA 726
Query: 786 MGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGE 845
MG+N P RTV+F ++RK DG R+L PGE+TQMAGRAGRRGLD GTV+V+ +
Sbjct: 727 MGLNLPTRTVIFSSIRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSI 786
Query: 846 SDLKHIIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLL 905
+ K + +G TRL+SQFRLTY MIL+LLR+E L+VE+M+K SF+E + PE ++ +
Sbjct: 787 ATFKEVTMGVPTRLQSQFRLTYNMILNLLRIEALRVEEMIKYSFSENAKETLQPEHEKQI 846
Query: 906 MRKLAQPPKTIE---CIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVL 960
+ L + +TIE C + IE++ ++ ++ + + ++S L GR++
Sbjct: 847 -KVLQEELQTIEYKSCEICDNDIEKFLELMLAYKEATVNLMQEMVKSPSILHILKEGRLV 905
Query: 961 FVKSQTGQDHL-LGAVVKAPSANNKEYIVMLLKP-DLPSASETSL 1003
+ D L LG V K + I+ KP LP+ L
Sbjct: 906 AFRDPN--DCLKLGFVFKVSLKDAVCVIMTFTKPYKLPNGEPNHL 948
Score = 447 (162.4 bits), Expect = 2.4e-198, Sum P(3) = 2.4e-198
Identities = 100/237 (42%), Positives = 143/237 (60%)
Query: 1146 CIKLEEHMKLTKENKRH--KDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADLVV 1203
C L +H + + K H K ++ L MSD+ L +PD++ R+ VLK+ ID + V
Sbjct: 1054 CPNLSQH--IVPKFKAHVIKKKIEELYHLMSDQNLSLLPDYEKRLAVLKDTEFIDQNHNV 1111
Query: 1204 QIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSE--PSLTPKL 1261
+KGRVACE+NSG EL+ TE + +N L EPEE VA++S FV++ + E P +TP+L
Sbjct: 1112 LLKGRVACEINSGYELVLTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRL 1171
Query: 1262 SVAKERLYNTAIR-LGELQAH-FKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICEL 1319
+ K+R+ + L H + D E+ D +F ++ VVYEWA+G F +I E+
Sbjct: 1172 AKGKQRIEEIYKKMLCVFNTHQIPLTQDEAEFL-DRKRFAMMNVVYEWARGLSFKEIMEM 1230
Query: 1320 TDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
+ EG +VR I LDE CRE + A+ I+GNS L+ KM A IKRDIVFAASLY+
Sbjct: 1231 SPEAEGTVVRVITWLDEICREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYL 1287
Score = 69 (29.3 bits), Expect = 2.4e-198, Sum P(3) = 2.4e-198
Identities = 32/112 (28%), Positives = 48/112 (42%)
Query: 77 SPEKVGRQWDFDWFEMAKVPLEPSLAQSVVAPVWEVPFRRQTKQGKWE--PNSVDVSELM 134
SPE + D+ E+ KVP +P S F+R +GK VD+ E+
Sbjct: 78 SPEDCSGKLDYK--ELLKVP-DPINRTSY-------QFKRTGLEGKISGYKEEVDLKEVA 127
Query: 135 -LGAQDSGPLPRVAGPAKDFVRGSINSRPFRPGGLEDSQSLERILPDGASNG 185
A +S + R ++ VRGS PF PGG+ ++ + D NG
Sbjct: 128 NANASNSLSITRSINHNQNSVRGSTAQLPFTPGGIP----MKSVKTDSEQNG 175
Score = 44 (20.5 bits), Expect = 1.1e-195, Sum P(3) = 1.1e-195
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 39 KSLPDFILPPAFPRETAESIKEHIEDKYLSMGLDTNEFSP 78
KS+ + I+ A TA++ + D+ L +G+D P
Sbjct: 252 KSISEEIMEEATEETTADNADDAEIDELLPIGIDFGRTKP 291
Score = 42 (19.8 bits), Expect = 1.3e-38, Sum P(3) = 1.3e-38
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 221 NVYKDQDQSSLKSTSDEKLNELSVQFDDL 249
N+ K S +K+ S++K + FDD+
Sbjct: 371 NMTKTIYTSPIKALSNQKFRDFKETFDDV 399
>WB|WBGene00008502 [details] [associations]
symbol:skih-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 EMBL:Z68341
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC
GeneTree:ENSGT00690000102154 PIR:T20487 RefSeq:NP_502084.2
ProteinModelPortal:Q19103 SMR:Q19103 STRING:Q19103 PaxDb:Q19103
EnsemblMetazoa:F01G4.3 GeneID:178017 KEGG:cel:CELE_F01G4.3
UCSC:F01G4.3 CTD:178017 WormBase:F01G4.3 InParanoid:Q19103
NextBio:899374 Uniprot:Q19103
Length = 1266
Score = 1777 (630.6 bits), Expect = 5.2e-186, Sum P(2) = 5.2e-186
Identities = 439/1103 (39%), Positives = 625/1103 (56%)
Query: 316 PQLEPESIDSDAEGKTTVGFNSVKEADLSVLDEI-LSVKSGGTTSILDDGGGQQQ--KEA 372
P + ESI+S+ +T V E ++ DEI + + G T +++ G + KE
Sbjct: 208 PVKKSESIESE---ETPEDDKKVSENEI---DEIEIPIIPGNTEKVIEIFGAATEPTKEK 261
Query: 373 WVVSGSTEAIADR---FHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKT 429
+ + AD + LVP +A +PF LD FQ+ ++ +E G+S+FVAAHTSAGKT
Sbjct: 262 FEFAQRLVLSADEEDEYKRLVPTMARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKT 321
Query: 430 VVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMT 488
VVAEYA AL H TRAVYT+PIK +SNQK+RDF F DVGL+TGD+ L PEA+CLIMT
Sbjct: 322 VVAEYAIALCQAHKTRAVYTSPIKALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMT 381
Query: 489 TEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPN 548
TEILRSMLY G+++IRD+EWV+FDEVHY+N+ ERG VWEEV+IMLP H+ IV+LSATVPN
Sbjct: 382 TEILRSMLYNGSEVIRDLEWVVFDEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPN 441
Query: 549 TVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGEFYKVCENEAFIPQGWKAAKDAYK 608
VEFADW+GR K +KI V T +RPVPLEH LY +G Q K KD +K
Sbjct: 442 CVEFADWVGRIKNRKINVISTDRRPVPLEHFLY-TG-------------QDGKTQKDLFK 487
Query: 609 RKNLXXXXXXXXXXXXXXXPRDGARAQKREHPN----RGKQNKHSVVGIKNSGGSQNNWG 664
+ A+ ++E RG Q G N GG NW
Sbjct: 488 ---IIDRSGQFILKGYNDAKDSKAKIYEKEKAGGAGGRGTQRGGGRGGGGNGGG--RNWP 542
Query: 665 LRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCD 724
+++ +I+L LIN + LP+V+F FS+ CD+ A ++ ++LT+ EK +R+F
Sbjct: 543 -GKNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFFS 601
Query: 725 KAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETF 784
+ RLKGSD+ LPQ++ ++ L RG A+HH+G+LPI+KEV+E+LF +G VK+LF+TETF
Sbjct: 602 QCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETF 661
Query: 785 AMGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDE-IP 843
AMGVN PAR VVFD++ K DG E R L PGEYTQMAGRAGRRGLD GTV+++C+D +P
Sbjct: 662 AMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDSTVP 721
Query: 844 GESDLKHIIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQ 903
LK++I G A RLES+FR+TY MIL+LLRVE+LK+EDML+RS+ E S ++ E+++
Sbjct: 722 QPDVLKNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVESDSLRESKEKRK 781
Query: 904 LLM--RKLAQPPKTIECIKGEP--AIEEYYDMYYEAEKYNNQITEAFMQS--AHQFLMPG 957
L+ + Q TIEC P + +Y+D + + I ++ L G
Sbjct: 782 SLVDTKNAIQTMSTIECSTCSPNSQLRDYHDALAVFLRKSEHIWPKLNDENVINKLLCSG 841
Query: 958 RVLFVKSQTGQDHLLG-AVVKAPSANNKEYIVMLLKPDLPSASETSLDKKSGDFSEGYFV 1016
R L V S Q L V+ NNK +++ D A ET+ +K + G+
Sbjct: 842 RFLIVNS--AQQQLQNECVLLIKELNNKTLQILVASAD---ADETT-NKNAAAI--GFSK 893
Query: 1017 IPKSKRG--LEEEYCGSVSH--RKGSG--VINIK------LPYHGAAAGVSYEVRGIDKK 1064
+PKS+ EE S S +G+ NI+ +P G A + +G+
Sbjct: 894 LPKSELSWLTEENSLLSTSKFGTRGAAHCSTNIRSFRLCEIPLSGIVAVMKKCAKGVQSG 953
Query: 1065 ELLCICNCKIKIDQVGLLEDVS-SAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMN 1123
E+L N + Q+ D S K +QQ+ K K+L N
Sbjct: 954 EILQEYN----MTQIPRFRDRELSENVKKLLQQITTAVPGLKSGEIETYTWKELGSFCQN 1009
Query: 1124 LVEAYYKWAGLLRKMAAN-------KCHGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDE 1176
L ++ LL K+ N C + +EH + ++ R + ++ +L++++S +
Sbjct: 1010 LDTSFD--TDLLEKLEYNLNLPQSFPARHCTRFDEHFSVLRDRIRIERKIESLEYELSSD 1067
Query: 1177 ALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPE 1236
AL ++ R+ VL+ + ++ +V +KGR+ CE++ +EL+ TE + + + P
Sbjct: 1068 ALLLSEEYHNRLKVLEALNFVEQKMV-SLKGRIGCEIHH-QELLITELILDYKFHQRSPA 1125
Query: 1237 EAVAIMSAFVFQQRNTSEPSL--TPKLSVAKERLYNTAIRLGELQAHFKVQIDPEEYARD 1294
E A++S Q + E E + + RL + + K QI
Sbjct: 1126 ELAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRLESVASKHKSQISD---LGC 1182
Query: 1295 NLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALY 1354
++F L+EVVYEWA GTPF I E+TD EGLIV+ I RLDE C++ RNA I+G+ AL
Sbjct: 1183 EIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALV 1242
Query: 1355 KKMETASNAIKRDIVFAASLYIT 1377
+KME S +I+RDIVFAASLY T
Sbjct: 1243 EKMEEVSASIRRDIVFAASLYTT 1265
Score = 49 (22.3 bits), Expect = 5.2e-186, Sum P(2) = 5.2e-186
Identities = 26/101 (25%), Positives = 47/101 (46%)
Query: 150 AKDFVRGSINSRPFRPGGLEDSQSLERILPDGASNGEWVQEILKGGPAQVVPPSFKQGLD 209
A + ++GS + PF PG LE+ L+ +L GE + G ++ + SFK
Sbjct: 103 AGNSIKGSPGNVPFLPGFLEE---LDDLLA-----GETTAKSTSGEESKFL--SFKDDAT 152
Query: 210 LGELQAYPCLWNVYKDQDQSSLKSTSDEKLNELSVQFDDLF 250
L L P + + + SS+K + E ++++ D+F
Sbjct: 153 L--LNTIPTIGQIVLP-NHSSVKKPA-ETPKSINIEEMDMF 189
>FB|FBgn0039117 [details] [associations]
symbol:tst "twister" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 EMBL:AJ276896
ProteinModelPortal:Q9BI21 SMR:Q9BI21 STRING:Q9BI21 PaxDb:Q9BI21
PRIDE:Q9BI21 FlyBase:FBgn0039117 InParanoid:Q9BI21
OrthoDB:EOG46HDRK ArrayExpress:Q9BI21 Bgee:Q9BI21 Uniprot:Q9BI21
Length = 1197
Score = 1028 (366.9 bits), Expect = 7.7e-185, Sum P(3) = 7.7e-185
Identities = 272/747 (36%), Positives = 405/747 (54%)
Query: 645 QNKHSVVG-IKNSGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNHCDKLAD 703
+ K + G K GG N + E W+ LI+ L + +++PVV F S+N CD
Sbjct: 475 ERKKEMQGKAKGGGGGPRNHLNAKQEQYTWIGLIDFLRRSNMMPVVAFTLSRNRCDSNLA 534
Query: 704 GMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVK 763
+ +DL + EK ++ F + ++LK DR +PQ++ ++ L RGI +HH+G+LPI+K
Sbjct: 535 ALQSVDLNTEKEKGAVQKFFLQCLAKLKPPDRTIPQVLVLKDALERGIGVHHSGILPILK 594
Query: 764 EVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMAGRA 823
E++EMLF G+VK+LF+TETFAMGVN PARTVVFD+ +KFDG E R L PGEY QMAGRA
Sbjct: 595 EIVEMLFQNGLVKLLFATETFAMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRA 654
Query: 824 GRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLLRVEELKVED 883
GRRG D+ GT +++C+ +P +L+ +I+G +L+SQF L Y +IL LR+E +KVED
Sbjct: 655 GRRGHDETGTAIIMCKGSVPPSMELRPMILGLPEKLQSQFILRYAVILTCLRIESIKVED 714
Query: 884 MLKRSFAEFHSQKKLPEQQ-QLLMR--KLAQPPKTIECIKGEPAIEEYYDMYYEAEKYNN 940
++K SF EF+ + +LP QQ QL + K A P E + +P + +YD E K +
Sbjct: 715 IMKFSFKEFNLKLQLPTQQKQLRLAEDKFAMLPTLGEHL--QPLVN-FYDKAVEYWKEKH 771
Query: 941 QITEAFMQSA--HQFLMPGRVLFVKSQTGQDHLLGAVVKAPSANNKEYIVMLLKPDLPSA 998
+I + + + L GRV+ + +Q + L ++ S K+ I +L D
Sbjct: 772 RIMKFVVTQPKIQKELKAGRVIVI-TQGKHYNKLAILLNTKSVPGKDTIYKVLVLDHQFK 830
Query: 999 SETSLDKKSGDFSEGYFVIPKSKRGLEEEYCGSVSHRKGSGVINIKLPYHGAAAGVSYEV 1058
++ S + G+ Y ++ + R + + G H V++IK + ++
Sbjct: 831 AKDSNSLQQGELY--YKILSLTPRNMTFQPVGIGGHT----VLDIK----------AIDI 874
Query: 1059 RGIDKKELLCICNCKIKIDQVGLLEDVSSAAFSKTVQQLLV-LKSDEKKYPQALDPVKDL 1117
I K L + I+ + LE + S +V + + L + Y D +K +
Sbjct: 875 ISITKSTLKVDADAIIRNWEQRQLERFKDSPPSGSVVKAVTELNQLNESYIDNPDNIKYV 934
Query: 1118 KLKDMNLVEAYYKWA------GLLRKMAANKCHGCIK-LEEHMKLTKENKRHKDEVNTLK 1170
L +V A + A LLRK+ H I E+ E + + + L+
Sbjct: 935 NLSKEIIVNADSEVAMLNYVDHLLRKVGEFLPHTNIAGFEQEFAKVYERRMLEIHIEELR 994
Query: 1171 FQMSDEALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQL 1230
F+ S L PD+ ++ VL+ + ID V +KG+VACEM E LI TE + N
Sbjct: 995 FKNSARNLTLYPDYCNKLKVLRALKYIDELDEVTLKGKVACEMGQNELLI-TELILCNMF 1053
Query: 1231 DDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLS--VAKERLYNTAIRLGELQAHFKVQIDP 1288
+DLEP E A++S VFQ + +P + L VA N I L E Q F+ I+
Sbjct: 1054 NDLEPAEIAALLSGLVFQAKMQDKPVIPEALKECVAAFEQINDTI-LAEEQ-RFQAAIET 1111
Query: 1289 EEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIM 1348
+ + L FGL+EVVYEWA+ PFA+I +LT V EG+IVR I +L+ET R+ + AA +
Sbjct: 1112 D----NRLNFGLLEVVYEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETVRDVKTAAIRI 1167
Query: 1349 GNSALYKKMETASNAIKRDIVFAASLY 1375
GN L KME AS AIKRDIVF ASLY
Sbjct: 1168 GNPGLQSKMEEASAAIKRDIVFTASLY 1194
Score = 717 (257.5 bits), Expect = 7.7e-185, Sum P(3) = 7.7e-185
Identities = 137/213 (64%), Positives = 163/213 (76%)
Query: 370 KEAWVVSGSTEAIADRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKT 429
K W + F E +P A+DFPFELD FQK+AI LE VFVAAHTSAGKT
Sbjct: 232 KSDWAEMVDISQPINNFKEQIPCPAMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKT 291
Query: 430 VVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMT 488
VVAEYA AL+ + TR +YT+PIK +SNQKYRDF F DVGL+TGD+ + P ASCLIMT
Sbjct: 292 VVAEYAIALSKRDLTRTIYTSPIKALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMT 351
Query: 489 TEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPN 548
TEILRSMLY G+D+ RD+EWVIFDEVHY+N+ ERG VWEEVII+LP H+NI++LSATVPN
Sbjct: 352 TEILRSMLYCGSDVTRDLEWVIFDEVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPN 411
Query: 549 TVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLY 581
T+E ADW+G TK++K+ V T KRPVPL H LY
Sbjct: 412 TLELADWVGSTKKRKVYVISTLKRPVPLTHFLY 444
Score = 86 (35.3 bits), Expect = 7.7e-185, Sum P(3) = 7.7e-185
Identities = 25/88 (28%), Positives = 44/88 (50%)
Query: 128 VDVSELMLGAQDSGPLPRVAGPAKDFVRGSINSRPFRPGGLEDSQSLERILPDGASNGEW 187
+D+ + A +S + R G +D RGS ++ PF PGG ++ + ++I SN ++
Sbjct: 69 LDLEAVGANANNSMSMQREPGLLEDATRGSHSNFPFWPGGFDEQR--QQIAALDVSNFQF 126
Query: 188 VQEILKGGPAQVVPPSFKQGLDLGELQA 215
++L VPP F G D + Q+
Sbjct: 127 GDKLL------TVPPGFSSGYDFFQSQS 148
Score = 46 (21.3 bits), Expect = 4.0e-114, Sum P(3) = 4.0e-114
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 538 NIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRP 573
N+ LL + ++ +W+ T+ ++ TGT K P
Sbjct: 160 NVDLLE-NLEQDLDVQEWMKLTRSEETSSTGTPKSP 194
>ZFIN|ZDB-GENE-010430-5 [details] [associations]
symbol:skiv2l "superkiller viralicidic activity 2 (S.
cerevisiae homolog)-like" species:7955 "Danio rerio" [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-010430-5 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GeneTree:ENSGT00690000102154 EMBL:FP102194 EMBL:FP067438
IPI:IPI00490616 Ensembl:ENSDART00000089609 OMA:TIMASAD Bgee:F1R881
Uniprot:F1R881
Length = 1249
Score = 885 (316.6 bits), Expect = 1.9e-164, Sum P(2) = 1.9e-164
Identities = 229/587 (39%), Positives = 334/587 (56%)
Query: 644 KQNKHSV-VGIKNSGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNHCDKLA 702
+ +KH+ G KN SQ+N + ++W TL+N LS++ PVV F FS+ CD+ A
Sbjct: 536 RTSKHAQSFGTKNV--SQHNTTASQDR-AVWQTLLNYLSQRQQTPVVAFTFSRTRCDENA 592
Query: 703 DGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIV 762
++ +DLT+S EKSEI F K+ +RL+G DR LPQI+ ++ LL+RGI +HH+G+LPI+
Sbjct: 593 RSLTSLDLTTSIEKSEIHSFLQKSLTRLRGGDRQLPQILLMRDLLKRGIGVHHSGILPIL 652
Query: 763 KEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMAGR 822
KEVIEMLF RG+VKVLF+TETFAMGVN PARTVVFD++RK DG FR LLPGEY QMAGR
Sbjct: 653 KEVIEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGR 712
Query: 823 AGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLLRVEELKVE 882
AGRRGLD GTV++LC+ + +L +++G T L SQFRLTY MIL+LLRVE L+V
Sbjct: 713 AGRRGLDATGTVIILCKAGVHDMGELHSMMLGKPTVLHSQFRLTYTMILNLLRVEALRVT 772
Query: 883 DMLKRSFAEFHSQKKLPEQQQLLMRKLAQ--PPKTIECIKGEPA-IEEYYDMYYEAEKYN 939
DM+KRSF+E H + E++ +R PP E G+ + + YY E
Sbjct: 773 DMMKRSFSENHRDTQAHEKRISELRNTLSSLPPLDTE---GQLSDLLSYYHTITELHITT 829
Query: 940 NQITEAFMQSAH--QFLMPGRVLFVKSQTGQDH-LLGAVVKAPS-ANNKEYIVMLL--KP 993
+ +A ++S + + L GRV+ V + Q H LG +++ S A N+ + +++ K
Sbjct: 830 QSLQQAVLESVNGLKALSVGRVVIVNNS--QHHNSLGVILQVSSDAVNRTFTALIICEKG 887
Query: 994 DLPSASETSLDKKSGDFSEGYFVIPKSKRGLEEEYCGSVSHRKGSGVINIKLPYHGAAAG 1053
+ +AS+ +K + IP+ G SH V +KL A
Sbjct: 888 NEEAASDEQSNKVALPIYSKTLFIPE----------GPCSHT----VQKLKLQDISAITT 933
Query: 1054 VSYEVRGIDKKELLCICNCKIKIDQVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQALDP 1113
+ +V I ++ I N ++ Q D A S Q+LL L LDP
Sbjct: 934 KALKV--IPER---IIDNYNKRL-QPRFRLDPPGQAISTATQELLRLAEANMGGMTVLDP 987
Query: 1114 VKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEHMKLTKENKRHKDEVNTLKFQM 1173
V DL LK +++VE + L + C E +E ++E++ L F +
Sbjct: 988 VNDLHLKGVDVVEGVMRQRVLQDSLKDFHCIHSPTFSEQFTRVQERMSVQEELDKLLFLV 1047
Query: 1174 SDEALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEELI 1220
SD++L +P++ RI VL+ + +D+ VQ+KGRVAC+++S E L+
Sbjct: 1048 SDQSLTLLPEYHQRIKVLEALQYVDSSGAVQLKGRVACQISSHELLL 1094
Score = 782 (280.3 bits), Expect = 1.9e-164, Sum P(2) = 1.9e-164
Identities = 182/376 (48%), Positives = 237/376 (63%)
Query: 251 KKAWEEDVAEFEKDDW-LPNRIKIMLYWRLHPFGNMQHKLKRKKVLFACGFLVYNYFSSY 309
K EED+ +FEKD +P +K + F + + + + +V + + S++
Sbjct: 177 KSELEEDI-DFEKDLMTVPPGLKAGM-----DFSDKEARNTKSEVN------LLSLLSTF 224
Query: 310 QSCYLGPQLEPESIDSDAEGKTTVGFNSVKEADLSVLDEILSVKSGGTTSI-------LD 362
P + E + E NS++ DL + D S G T S+ L+
Sbjct: 225 DDVLDAPPEDKEGVSQKEEIVKLPRTNSLE--DLGIKDSGSSQPQGNTGSLTEQKKKNLE 282
Query: 363 DGGGQQQKEAWVVSGSTEAIADRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAA 422
+ G +K A V S+ AD F++ +PD A +PFELD FQK+AI LE DSVFVAA
Sbjct: 283 EEKGDNKKWAIPVDISSPC-AD-FYKRIPDPAFKYPFELDVFQKQAILRLEAHDSVFVAA 340
Query: 423 HTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFSGKF-DVGLLTGDVSLRPE 481
HTSAGKTVVAEYA AL+ KH TR +YT+PIK +SNQK+RDF F DVGLLTGDV L PE
Sbjct: 341 HTSAGKTVVAEYAIALSQKHMTRTIYTSPIKALSNQKFRDFKNTFGDVGLLTGDVQLNPE 400
Query: 482 ASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVL 541
SCLIMTTEILRSMLY G+++IRD+EWVIFDEVHY+ND ERGVVWEEV+IMLP H++I+L
Sbjct: 401 GSCLIMTTEILRSMLYNGSEVIRDLEWVIFDEVHYINDAERGVVWEEVLIMLPEHVSIIL 460
Query: 542 LSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSG------EFYKVCENEA- 594
LSATVPN VEF++WIGR K++ I V T KRPVPLEH LY E + + +
Sbjct: 461 LSATVPNAVEFSEWIGRIKKRHIYVISTIKRPVPLEHYLYTGNSTKTQKELFMLLDATGN 520
Query: 595 FIPQGWKAAKDAYKRK 610
F+ +G+ AA +A K +
Sbjct: 521 FLTKGYYAAVEAKKER 536
Score = 527 (190.6 bits), Expect = 6.4e-125, Sum P(2) = 6.4e-125
Identities = 123/292 (42%), Positives = 167/292 (57%)
Query: 1084 DVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKC 1143
D A S Q+LL L LDPV DL LK +++VE + L + C
Sbjct: 958 DPPGQAISTATQELLRLAEANMGGMTVLDPVNDLHLKGVDVVEGVMRQRVLQDSLKDFHC 1017
Query: 1144 HGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADLVV 1203
E +E ++E++ L F +SD++L +P++ RI VL+ + +D+ V
Sbjct: 1018 IHSPTFSEQFTRVQERMSVQEELDKLLFLVSDQSLTLLPEYHQRIKVLEALQYVDSSGAV 1077
Query: 1204 QIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSV 1263
Q+KGRVAC+++S EL+ TE LFEN L L PEE+ A++S VF Q EP +T L
Sbjct: 1078 QLKGRVACQISS-HELLLTELLFENTLSPLAPEESAALLSCLVFTQNTQIEPHITNTLQE 1136
Query: 1264 AKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVP 1323
++ A R+G+LQ + E++ KFGL EVVY WA+G PFA+I +LTDV
Sbjct: 1137 GINQVLAVAQRIGDLQRDCGIAQTAEDFVAQ-FKFGLTEVVYCWARGMPFAEIAQLTDVQ 1195
Query: 1324 EGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLY 1375
EG IVR I RLDE +E R AA I+G+S L KME AS AI+RDIVF ASLY
Sbjct: 1196 EGTIVRCIQRLDEVLKEVRQAARIVGDSVLGSKMERASLAIRRDIVFTASLY 1247
Score = 106 (42.4 bits), Expect = 4.8e-93, Sum P(2) = 4.8e-93
Identities = 34/106 (32%), Positives = 53/106 (50%)
Query: 135 LGAQDSGPLPRVAGPAKDFVRGSINSRPFRPGGLEDSQSLERILPDGASNGEWVQEILKG 194
L A++S L R GP + +RGS + PF P G+E+ +LE+I + E ++I
Sbjct: 133 LSAKNSLSLQRQPGPPSESLRGSNTNYPFLPAGMEEL-TLEQI----KNKSELEEDIDFE 187
Query: 195 GPAQVVPPSFKQGLDLGELQAYPCLWNVYKDQDQSSLKSTSDEKLN 240
VPP K G+D + +A N + + SL ST D+ L+
Sbjct: 188 KDLMTVPPGLKAGMDFSDKEAR----NTKSEVNLLSLLSTFDDVLD 229
Score = 49 (22.3 bits), Expect = 4.9e-52, Sum P(3) = 4.9e-52
Identities = 31/108 (28%), Positives = 45/108 (41%)
Query: 629 RDGARAQKREHPNRGKQNKHSVVGIKNSGGSQ--NNWGLRRSEVSIWLTLINKLSKKSLL 686
++G +QK E + N +GIK+SG SQ N G + L +KK +
Sbjct: 235 KEGV-SQKEEIVKLPRTNSLEDLGIKDSGSSQPQGNTGSLTEQKKKNLEEEKGDNKKWAI 293
Query: 687 PVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSD 734
PV I + C AD I + E+ VF +A RL+ D
Sbjct: 294 PVDI----SSPC---ADFYKRIPDPAFKYPFELDVFQKQAILRLEAHD 334
>SGD|S000003586 [details] [associations]
symbol:MTR4 "ATP-dependent 3'-5' RNA helicase of the DExD/H
family" species:4932 "Saccharomyces cerevisiae" [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IMP] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IMP] [GO:0043629
"ncRNA polyadenylation" evidence=IDA] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IGI;IDA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IMP] [GO:0071031 "nuclear mRNA surveillance of
mRNA 3'-end processing" evidence=IGI;IMP] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0031499 "TRAMP complex" evidence=IDA;IPI] [GO:0008143 "poly(A)
RNA binding" evidence=IDA] [GO:0034459 "ATP-dependent 3'-5' RNA
helicase activity" evidence=IMP;IDA] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071049
"nuclear retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IGI] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0071051
"polyadenylation-dependent snoRNA 3'-end processing" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011254 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
SGD:S000003586 GO:GO:0005524 GO:GO:0005730 EMBL:BK006943
GO:GO:0016491 GO:GO:0031499 GO:GO:0043629 GO:GO:0071035
GO:GO:0071038 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF56821 GO:GO:0000467 GO:GO:0071042 GO:GO:0071051
GO:GO:0008143 GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475
GO:GO:0034476 GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 EMBL:Z49325 PIR:S56822
RefSeq:NP_012485.1 PDB:2XGJ PDB:3L9O PDBsum:2XGJ PDBsum:3L9O
ProteinModelPortal:P47047 SMR:P47047 DIP:DIP-6394N IntAct:P47047
MINT:MINT-620894 STRING:P47047 PaxDb:P47047 PeptideAtlas:P47047
EnsemblFungi:YJL050W GeneID:853397 KEGG:sce:YJL050W CYGD:YJL050w
EvolutionaryTrace:P47047 NextBio:973882 Genevestigator:P47047
GermOnline:YJL050W Uniprot:P47047
Length = 1073
Score = 593 (213.8 bits), Expect = 6.8e-156, Sum P(3) = 6.8e-156
Identities = 115/221 (52%), Positives = 157/221 (71%)
Query: 387 HELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRA 446
H+ V + A +PF LD FQ AI ++ G+SV V+AHTSAGKTVVAEYA A + K+ R
Sbjct: 137 HKRVNE-ARTYPFTLDPFQDTAISCIDRGESVLVSAHTSAGKTVVAEYAIAQSLKNKQRV 195
Query: 447 VYTAPIKTISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRD 505
+YT+PIK +SNQKYR+ +F DVGL+TGD+++ P+A CL+MTTEILRSMLYRG++++R+
Sbjct: 196 IYTSPIKALSNQKYRELLAEFGDVGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMRE 255
Query: 506 IEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIR 565
+ WVIFDEVHY+ D ERGVVWEE II+LP + V LSAT+PN +EFA+WI + +
Sbjct: 256 VAWVIFDEVHYMRDKERGVVWEETIILLPDKVRYVFLSATIPNAMEFAEWICKIHSQPCH 315
Query: 566 VTGTTKRPVPLEHCLYYS---GEFYKVCENEAFIPQGWKAA 603
+ T RP PL+H L+ + G + V E F + ++ A
Sbjct: 316 IVYTNFRPTPLQHYLFPAHGDGIYLVVDEKSTFREENFQKA 356
Score = 590 (212.7 bits), Expect = 6.8e-156, Sum P(3) = 6.8e-156
Identities = 134/314 (42%), Positives = 196/314 (62%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
++ + KK PV++F FSK C++LA MS +D S EK + + A + L +DR
Sbjct: 397 IVKMIWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTKIFNNAIALLPETDR 456
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
LPQI + LLRRGI IHH+GLLPI+KEVIE+LF G +KVLF+TETF++G+N PA+TV
Sbjct: 457 ELPQIKHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTV 516
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS 855
VF ++RK+DG++FR + GEY QM+GRAGRRGLD G V+++ DE K ++ G
Sbjct: 517 VFTSVRKWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMI-DEKMEPQVAKGMVKGQ 575
Query: 856 ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKT 915
A RL+S F L Y MIL+L+RVE + E ML+ SF +F + +P ++ +KLA+ K
Sbjct: 576 ADRLDSAFHLGYNMILNLMRVEGISPEFMLEHSFFQFQNVISVP----VMEKKLAELKKD 631
Query: 916 IECIK--GEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVKSQTGQDHL 971
+ I+ E ++EY+++ + Y + + A+ FL PGR++ + S G+D+
Sbjct: 632 FDGIEVEDEENVKEYHEIEQAIKGYREDVRQVVTHPANALSFLQPGRLVEI-SVNGKDNY 690
Query: 972 -LGAVVKAPSANNK 984
GAVV NK
Sbjct: 691 GWGAVVDFAKRINK 704
Score = 477 (173.0 bits), Expect = 6.8e-156, Sum P(3) = 6.8e-156
Identities = 103/300 (34%), Positives = 186/300 (62%)
Query: 1083 EDVSSAAFSKTVQQLLVLKSDEKKYPQA---LDPVKDLKLKDMNLVEAYYKWAGLLRKMA 1139
+D+ ++ +TV + L + +++P LDPVK++K++D + ++ K L K++
Sbjct: 779 KDIRASGQKETVGKSL--REVNRRFPDGIPVLDPVKNMKIEDEDFLKLMKKIDVLNTKLS 836
Query: 1140 ANKCHGCIKLEE-HMKLTKENKRHKDEVNTLKFQMSD-EALQQMPDFQGRIDVLKEIG-C 1196
+N ++LEE + K ++++ H+D + LK ++S+ +A+ Q+ D + R VL+ +G C
Sbjct: 837 SNPLTNSMRLEELYGKYSRKHDLHED-MKQLKRKISESQAVIQLDDLRRRKRVLRRLGFC 895
Query: 1197 IDADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPS 1256
D ++++KGRVACE++SG+EL+ TE +F ++L+PE+A A++S F FQ+R P
Sbjct: 896 TPND-IIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALLSCFAFQERCKEAPR 954
Query: 1257 LTPKLSVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADI 1316
L P+L+ + + A ++ ++ K+++ ++Y ++ + L+EVVYEW +G F I
Sbjct: 955 LKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYV-ESFRHELMEVVYEWCRGATFTQI 1013
Query: 1317 CELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
C++TDV EG ++R RL+E +E + A +GNS+L +KME I RDIV A SLY+
Sbjct: 1014 CKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAVLKLIHRDIVSAGSLYL 1073
Score = 42 (19.8 bits), Expect = 7.5e-98, Sum P(3) = 7.5e-98
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K EL +F D+
Sbjct: 199 SPIKALSNQKYRELLAEFGDV 219
Score = 41 (19.5 bits), Expect = 4.3e-40, Sum P(2) = 4.3e-40
Identities = 18/71 (25%), Positives = 31/71 (43%)
Query: 178 LPDGASNGEWVQEILKGGPAQVVPPSFKQGLDLGELQAYPCLWNVYKDQDQSSLKSTSDE 237
LP+G E ++ + V+P + +G L+ Y + KD S K T +
Sbjct: 742 LPEGIRPAEEGEKSI----CAVIPITLDSIKSIGNLRLY-----MPKDIRASGQKETVGK 792
Query: 238 KLNELSVQFDD 248
L E++ +F D
Sbjct: 793 SLREVNRRFPD 803
Score = 37 (18.1 bits), Expect = 2.5e-97, Sum P(3) = 2.5e-97
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 629 RDGARAQKREHPNRGKQNK 647
+ G +K EH +NK
Sbjct: 42 KHGLEEEKEEHEENNSENK 60
>UNIPROTKB|F5H7E2 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:18734 ChiTaRS:SKIV2L2 EMBL:AC010480
EMBL:AC020728 IPI:IPI01011073 ProteinModelPortal:F5H7E2 SMR:F5H7E2
Ensembl:ENST00000545714 UCSC:uc011cqi.2 ArrayExpress:F5H7E2
Bgee:F5H7E2 Uniprot:F5H7E2
Length = 941
Score = 597 (215.2 bits), Expect = 1.4e-153, Sum P(3) = 1.4e-153
Identities = 130/310 (41%), Positives = 185/310 (59%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
++ + +++ PV+IF FSK C+ A M+ +D + EK + A L D+
Sbjct: 276 IVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDK 335
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
LPQ+ V LL+RGI IHH GLLPI+KE IE+LF G++K LF+TETFAMG+N PARTV
Sbjct: 336 KLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTV 395
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS 855
+F N RKFDG++FR + GEY QM+GRAGRRG+D G +V+L DE + K ++ GS
Sbjct: 396 LFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRG-IVILMVDEKMSPTIGKQLLKGS 454
Query: 856 ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKT 915
A L S F LTY M+L+LLRVEE+ E ML++SF +F + +P + + Q K
Sbjct: 455 ADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKI 514
Query: 916 IECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVKSQTGQDHLLG 973
+ I E ++ YY + + K +I E + + FL PGR++ VK++ G D G
Sbjct: 515 V--IPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNE-GDDFGWG 571
Query: 974 AVVKAPSANN 983
VV +N
Sbjct: 572 VVVNFSKKSN 581
Score = 589 (212.4 bits), Expect = 1.4e-153, Sum P(3) = 1.4e-153
Identities = 109/192 (56%), Positives = 147/192 (76%)
Query: 394 ALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIK 453
A ++PF LD FQ+EAI ++N SV V+AHTSAGKTV AEYA ALA + R ++T+PIK
Sbjct: 32 AKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIK 91
Query: 454 TISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFD 512
+SNQKYR+ +F DVGL+TGDV++ P ASCL+MTTEILRSMLYRG++++R++ WVIFD
Sbjct: 92 ALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFD 151
Query: 513 EVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKR 572
E+HY+ D ERGVVWEE II+LP +++ V LSAT+PN +FA+WI ++ V T R
Sbjct: 152 EIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYR 211
Query: 573 PVPLEHCLYYSG 584
P PL+H ++ +G
Sbjct: 212 PTPLQHYIFPAG 223
Score = 443 (161.0 bits), Expect = 1.4e-153, Sum P(3) = 1.4e-153
Identities = 102/285 (35%), Positives = 163/285 (57%)
Query: 1099 VLKSDE---KKYPQA---LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEH 1152
VLKS + K++P LDP+ D+ ++D L + K +M ++ H LE
Sbjct: 658 VLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETV 717
Query: 1153 MKLTKENKRHKDEVNTLKFQMSD-EALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVAC 1211
L ++ + ++ + K ++ + QM + + R VL+ +G + V+++KGRVAC
Sbjct: 718 YTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVAC 777
Query: 1212 EMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLYNT 1271
E++S +EL+ TE +F +DL E+A A++S FVFQ+ ++ P LT +L+ ++
Sbjct: 778 EISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQEC 837
Query: 1272 AIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTI 1331
A R+ ++ A K++ID E Y + K L++VVY WA G FA IC++TDV EG I+R +
Sbjct: 838 AKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCM 896
Query: 1332 VRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
RL+E R+ AA +GN+ L K IKRDIVFAASLY+
Sbjct: 897 RRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 941
Score = 40 (19.1 bits), Expect = 6.6e-53, Sum P(2) = 6.6e-53
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1212 EMNSGEELICTECLFENQLDDLEPEE 1237
+ N+ EE E +F N +D L E+
Sbjct: 309 DFNTDEEKKMVEEVFSNAIDCLSDED 334
Score = 39 (18.8 bits), Expect = 1.1e-95, Sum P(3) = 1.1e-95
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K E+ +F D+
Sbjct: 88 SPIKALSNQKYREMYEEFQDV 108
Score = 37 (18.1 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 587 YKVCENEAFIPQGWKAAKDAYKR 609
Y +CE +A I K+AK K+
Sbjct: 718 YTLCEKKAQIAIDIKSAKRELKK 740
>UNIPROTKB|P42285 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0000178 "exosome (RNase complex)"
evidence=IDA] [GO:0000460 "maturation of 5.8S rRNA" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:D29641
EMBL:BX640789 EMBL:BC014669 EMBL:BC028604 EMBL:BC031779
EMBL:BC065258 EMBL:BC104996 EMBL:BC113509 IPI:IPI00647217
RefSeq:NP_056175.3 UniGene:Hs.274531 ProteinModelPortal:P42285
SMR:P42285 IntAct:P42285 STRING:P42285 PhosphoSite:P42285
DMDM:71153172 SWISS-2DPAGE:P42285 PaxDb:P42285 PeptideAtlas:P42285
PRIDE:P42285 DNASU:23517 Ensembl:ENST00000230640 GeneID:23517
KEGG:hsa:23517 UCSC:uc003jpy.4 CTD:23517 GeneCards:GC05P054605
HGNC:HGNC:18734 HPA:HPA037379 neXtProt:NX_P42285
PharmGKB:PA134901921 HOVERGEN:HBG104255 InParanoid:P42285
OrthoDB:EOG4D52WW PhylomeDB:P42285 ChiTaRS:SKIV2L2 GenomeRNAi:23517
NextBio:45957 ArrayExpress:P42285 Bgee:P42285 CleanEx:HS_SKIV2L2
Genevestigator:P42285 GermOnline:ENSG00000039123 Uniprot:P42285
Length = 1042
Score = 597 (215.2 bits), Expect = 7.9e-153, Sum P(3) = 7.9e-153
Identities = 130/310 (41%), Positives = 185/310 (59%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
++ + +++ PV+IF FSK C+ A M+ +D + EK + A L D+
Sbjct: 377 IVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDK 436
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
LPQ+ V LL+RGI IHH GLLPI+KE IE+LF G++K LF+TETFAMG+N PARTV
Sbjct: 437 KLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTV 496
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS 855
+F N RKFDG++FR + GEY QM+GRAGRRG+D G +V+L DE + K ++ GS
Sbjct: 497 LFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRG-IVILMVDEKMSPTIGKQLLKGS 555
Query: 856 ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKT 915
A L S F LTY M+L+LLRVEE+ E ML++SF +F + +P + + Q K
Sbjct: 556 ADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKI 615
Query: 916 IECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVKSQTGQDHLLG 973
+ I E ++ YY + + K +I E + + FL PGR++ VK++ G D G
Sbjct: 616 V--IPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNE-GDDFGWG 672
Query: 974 AVVKAPSANN 983
VV +N
Sbjct: 673 VVVNFSKKSN 682
Score = 589 (212.4 bits), Expect = 7.9e-153, Sum P(3) = 7.9e-153
Identities = 109/192 (56%), Positives = 147/192 (76%)
Query: 394 ALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIK 453
A ++PF LD FQ+EAI ++N SV V+AHTSAGKTV AEYA ALA + R ++T+PIK
Sbjct: 133 AKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIK 192
Query: 454 TISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFD 512
+SNQKYR+ +F DVGL+TGDV++ P ASCL+MTTEILRSMLYRG++++R++ WVIFD
Sbjct: 193 ALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFD 252
Query: 513 EVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKR 572
E+HY+ D ERGVVWEE II+LP +++ V LSAT+PN +FA+WI ++ V T R
Sbjct: 253 EIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYR 312
Query: 573 PVPLEHCLYYSG 584
P PL+H ++ +G
Sbjct: 313 PTPLQHYIFPAG 324
Score = 443 (161.0 bits), Expect = 7.9e-153, Sum P(3) = 7.9e-153
Identities = 102/285 (35%), Positives = 163/285 (57%)
Query: 1099 VLKSDE---KKYPQA---LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEH 1152
VLKS + K++P LDP+ D+ ++D L + K +M ++ H LE
Sbjct: 759 VLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETV 818
Query: 1153 MKLTKENKRHKDEVNTLKFQMSD-EALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVAC 1211
L ++ + ++ + K ++ + QM + + R VL+ +G + V+++KGRVAC
Sbjct: 819 YTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVAC 878
Query: 1212 EMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLYNT 1271
E++S +EL+ TE +F +DL E+A A++S FVFQ+ ++ P LT +L+ ++
Sbjct: 879 EISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQEC 938
Query: 1272 AIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTI 1331
A R+ ++ A K++ID E Y + K L++VVY WA G FA IC++TDV EG I+R +
Sbjct: 939 AKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCM 997
Query: 1332 VRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
RL+E R+ AA +GN+ L K IKRDIVFAASLY+
Sbjct: 998 RRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042
Score = 40 (19.1 bits), Expect = 1.9e-52, Sum P(2) = 1.9e-52
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1212 EMNSGEELICTECLFENQLDDLEPEE 1237
+ N+ EE E +F N +D L E+
Sbjct: 410 DFNTDEEKKMVEEVFSNAIDCLSDED 435
Score = 39 (18.8 bits), Expect = 6.2e-95, Sum P(3) = 6.2e-95
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K E+ +F D+
Sbjct: 189 SPIKALSNQKYREMYEEFQDV 209
Score = 37 (18.1 bits), Expect = 3.9e-52, Sum P(2) = 3.9e-52
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 587 YKVCENEAFIPQGWKAAKDAYKR 609
Y +CE +A I K+AK K+
Sbjct: 819 YTLCEKKAQIAIDIKSAKRELKK 841
>UNIPROTKB|E2RCI5 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 CTD:23517 EMBL:AAEX03001437
RefSeq:XP_849676.1 Ensembl:ENSCAFT00000010985 GeneID:607950
KEGG:cfa:607950 Uniprot:E2RCI5
Length = 1042
Score = 596 (214.9 bits), Expect = 8.2e-153, Sum P(3) = 8.2e-153
Identities = 130/310 (41%), Positives = 185/310 (59%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
++ + +++ PV+IF FSK C+ A M+ +D + EK + A L D+
Sbjct: 377 IVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDK 436
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
LPQ+ V LL+RGI IHH GLLPI+KE IE+LF G++K LF+TETFAMG+N PARTV
Sbjct: 437 KLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTV 496
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS 855
+F N RKFDG++FR + GEY QM+GRAGRRG+D G +V+L DE + K ++ GS
Sbjct: 497 LFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRG-IVILMVDEKMSPTIGKQLLKGS 555
Query: 856 ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKT 915
A L S F LTY M+L+LLRVEE+ E ML++SF +F + +P + + Q K
Sbjct: 556 ADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKI 615
Query: 916 IECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVKSQTGQDHLLG 973
+ I E ++ YY + + K +I E + + FL PGR++ VK++ G D G
Sbjct: 616 V--IPNEESVVIYYKIRQQLAKLGKEIEEYVHKPKYCLPFLQPGRLVKVKNE-GDDFGWG 672
Query: 974 AVVKAPSANN 983
VV +N
Sbjct: 673 VVVNFSKKSN 682
Score = 589 (212.4 bits), Expect = 8.2e-153, Sum P(3) = 8.2e-153
Identities = 109/192 (56%), Positives = 147/192 (76%)
Query: 394 ALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIK 453
A ++PF LD FQ+EAI ++N SV V+AHTSAGKTV AEYA ALA + R ++T+PIK
Sbjct: 133 AKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIK 192
Query: 454 TISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFD 512
+SNQKYR+ +F DVGL+TGDV++ P ASCL+MTTEILRSMLYRG++++R++ WVIFD
Sbjct: 193 ALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFD 252
Query: 513 EVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKR 572
E+HY+ D ERGVVWEE II+LP +++ V LSAT+PN +FA+WI ++ V T R
Sbjct: 253 EIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYR 312
Query: 573 PVPLEHCLYYSG 584
P PL+H ++ +G
Sbjct: 313 PTPLQHYIFPAG 324
Score = 444 (161.4 bits), Expect = 8.2e-153, Sum P(3) = 8.2e-153
Identities = 102/285 (35%), Positives = 164/285 (57%)
Query: 1099 VLKSDE---KKYPQA---LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEH 1152
VLKS + K++P LDP+ D+ ++D L + K +M ++ H LE
Sbjct: 759 VLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETV 818
Query: 1153 MKLTKENKRHKDEVNTLKFQMSD-EALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVAC 1211
L ++ + ++ + K ++ + QM + + R VL+ +G + V+++KGRVAC
Sbjct: 819 YTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVAC 878
Query: 1212 EMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLYNT 1271
E++S +EL+ TE +F +DL E+A A++S FVFQ+ ++ P LT +L+ ++
Sbjct: 879 EISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQEC 938
Query: 1272 AIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTI 1331
A R+ ++ A K++ID E Y ++ K L++VVY WA G FA IC++TDV EG I+R +
Sbjct: 939 AKRIAKVSAEAKLEIDEETYL-NSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCM 997
Query: 1332 VRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
RL+E R+ AA +GN+ L K IKRDIVFAASLY+
Sbjct: 998 RRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042
Score = 40 (19.1 bits), Expect = 1.9e-52, Sum P(2) = 1.9e-52
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1212 EMNSGEELICTECLFENQLDDLEPEE 1237
+ N+ EE E +F N +D L E+
Sbjct: 410 DFNTDEEKKMVEEVFSNAIDCLSDED 435
Score = 39 (18.8 bits), Expect = 6.4e-95, Sum P(3) = 6.4e-95
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K E+ +F D+
Sbjct: 189 SPIKALSNQKYREMYEEFQDV 209
Score = 37 (18.1 bits), Expect = 3.9e-52, Sum P(2) = 3.9e-52
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 587 YKVCENEAFIPQGWKAAKDAYKR 609
Y +CE +A I K+AK K+
Sbjct: 819 YTLCEKKAQIAIDIKSAKRELKK 841
>MGI|MGI:1919448 [details] [associations]
symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2
(S. cerevisiae)" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000460 "maturation of 5.8S
rRNA" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919448 GO:GO:0005524
GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 CTD:23517
HOVERGEN:HBG104255 OrthoDB:EOG4D52WW ChiTaRS:SKIV2L2 EMBL:AK012158
EMBL:BC029230 IPI:IPI00113134 RefSeq:NP_082427.1 UniGene:Mm.291029
ProteinModelPortal:Q9CZU3 SMR:Q9CZU3 IntAct:Q9CZU3 STRING:Q9CZU3
PhosphoSite:Q9CZU3 PaxDb:Q9CZU3 PRIDE:Q9CZU3
Ensembl:ENSMUST00000022281 GeneID:72198 KEGG:mmu:72198
UCSC:uc007rws.1 InParanoid:Q9CZU3 NextBio:335677 Bgee:Q9CZU3
Genevestigator:Q9CZU3 GermOnline:ENSMUSG00000016018 Uniprot:Q9CZU3
Length = 1040
Score = 592 (213.5 bits), Expect = 9.9e-152, Sum P(3) = 9.9e-152
Identities = 129/310 (41%), Positives = 185/310 (59%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
++ + +++ PV+IF FSK C+ A M+ +D + EK + + A L D+
Sbjct: 375 IVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDK 434
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
LPQ+ V LL+RGI IHH GLLPI+KE IE+LF G++K LF+TETFAMG+N PARTV
Sbjct: 435 KLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTV 494
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS 855
+F N RK+DG++FR + GEY QM+GRAGRRG+D G +V+L DE + K ++ GS
Sbjct: 495 LFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMDDRG-IVILMVDEKMSPTIGKQLLKGS 553
Query: 856 ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKT 915
A L S F LTY M+L+LLRVEE+ E ML++SF +F + +P + + Q K
Sbjct: 554 ADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKI 613
Query: 916 IECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVKSQTGQDHLLG 973
+ I E + YY + + K +I E + + FL PGR++ VK++ G D G
Sbjct: 614 V--IPNEENVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNE-GDDFGWG 670
Query: 974 AVVKAPSANN 983
VV +N
Sbjct: 671 VVVNFSKKSN 680
Score = 589 (212.4 bits), Expect = 9.9e-152, Sum P(3) = 9.9e-152
Identities = 109/192 (56%), Positives = 147/192 (76%)
Query: 394 ALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIK 453
A ++PF LD FQ+EAI ++N SV V+AHTSAGKTV AEYA ALA + R ++T+PIK
Sbjct: 131 AKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIK 190
Query: 454 TISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFD 512
+SNQKYR+ +F DVGL+TGDV++ P ASCL+MTTEILRSMLYRG++++R++ WVIFD
Sbjct: 191 ALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFD 250
Query: 513 EVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKR 572
E+HY+ D ERGVVWEE II+LP +++ V LSAT+PN +FA+WI ++ V T R
Sbjct: 251 EIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYR 310
Query: 573 PVPLEHCLYYSG 584
P PL+H ++ +G
Sbjct: 311 PTPLQHYIFPAG 322
Score = 438 (159.2 bits), Expect = 9.9e-152, Sum P(3) = 9.9e-152
Identities = 101/285 (35%), Positives = 162/285 (56%)
Query: 1099 VLKSDE---KKYPQA---LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEH 1152
VLKS + +++P LDP+ D+ ++D L + K +M ++ H LE
Sbjct: 757 VLKSIQEVQRRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETV 816
Query: 1153 MKLTKENKRHKDEVNTLKFQMSD-EALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVAC 1211
L + + ++ + K ++ + QM + + R VL+ +G + V+++KGRVAC
Sbjct: 817 YTLCERKAQIALDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVAC 876
Query: 1212 EMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLYNT 1271
E++S +EL+ TE +F +DL E+A A++S FVFQ+ ++ P LT +L+ ++
Sbjct: 877 EISSADELLLTEMMFNGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQEC 936
Query: 1272 AIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTI 1331
A R+ ++ A K++ID E Y + K L++VVY WA G FA IC++TDV EG I+R +
Sbjct: 937 AKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCM 995
Query: 1332 VRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
RL+E R+ AA +GN+ L K IKRDIVFAASLY+
Sbjct: 996 RRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1040
Score = 40 (19.1 bits), Expect = 1.9e-52, Sum P(2) = 1.9e-52
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1212 EMNSGEELICTECLFENQLDDLEPEE 1237
+ N+ EE E +F N +D L E+
Sbjct: 408 DFNTDEEKKMVEEVFNNAIDCLSDED 433
Score = 39 (18.8 bits), Expect = 7.7e-94, Sum P(3) = 7.7e-94
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K E+ +F D+
Sbjct: 187 SPIKALSNQKYREMYEEFQDV 207
Score = 38 (18.4 bits), Expect = 3.0e-52, Sum P(2) = 3.0e-52
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 587 YKVCENEAFIPQGWKAAKDAYKR 609
Y +CE +A I K+AK K+
Sbjct: 817 YTLCERKAQIALDIKSAKRELKK 839
>UNIPROTKB|F1SLL6 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:FP236391 EMBL:CU929534 Ensembl:ENSSSCT00000018417
Uniprot:F1SLL6
Length = 1046
Score = 597 (215.2 bits), Expect = 1.9e-151, Sum P(3) = 1.9e-151
Identities = 130/310 (41%), Positives = 185/310 (59%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
++ + +++ PV+IF FSK C+ A M+ +D + EK + A L D+
Sbjct: 378 IVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDK 437
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
LPQ+ V LL+RGI IHH GLLPI+KE IE+LF G++K LF+TETFAMG+N PARTV
Sbjct: 438 KLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTV 497
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS 855
+F N RKFDG++FR + GEY QM+GRAGRRG+D G +V+L DE + K ++ GS
Sbjct: 498 LFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRG-IVILMVDEKMSPTIGKQLLKGS 556
Query: 856 ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKT 915
A L S F LTY M+L+LLRVEE+ E ML++SF +F + +P + + Q K
Sbjct: 557 ADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKI 616
Query: 916 IECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVKSQTGQDHLLG 973
+ I E ++ YY + + K +I E + + FL PGR++ VK++ G D G
Sbjct: 617 V--IPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNE-GDDFGWG 673
Query: 974 AVVKAPSANN 983
VV +N
Sbjct: 674 VVVNFSKKSN 683
Score = 589 (212.4 bits), Expect = 1.9e-151, Sum P(3) = 1.9e-151
Identities = 109/192 (56%), Positives = 147/192 (76%)
Query: 394 ALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIK 453
A ++PF LD FQ+EAI ++N SV V+AHTSAGKTV AEYA ALA + R ++T+PIK
Sbjct: 134 AKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIK 193
Query: 454 TISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFD 512
+SNQKYR+ +F DVGL+TGDV++ P ASCL+MTTEILRSMLYRG++++R++ WVIFD
Sbjct: 194 ALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFD 253
Query: 513 EVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKR 572
E+HY+ D ERGVVWEE II+LP +++ V LSAT+PN +FA+WI ++ V T R
Sbjct: 254 EIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYR 313
Query: 573 PVPLEHCLYYSG 584
P PL+H ++ +G
Sbjct: 314 PTPLQHYIFPAG 325
Score = 430 (156.4 bits), Expect = 1.9e-151, Sum P(3) = 1.9e-151
Identities = 102/288 (35%), Positives = 163/288 (56%)
Query: 1099 VLKSDE---KKYPQA---LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEH 1152
VLKS + K++P LDP+ D+ ++D L + K +M ++ H LE
Sbjct: 760 VLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETV 819
Query: 1153 MKLTKENKRHKDEVNTLKFQMSD-EALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVAC 1211
L ++ + ++ + K ++ + QM + + R VL+ +G + V+++KGRVAC
Sbjct: 820 YTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVAC 879
Query: 1212 EMN---SGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERL 1268
E++ S +EL+ TE +F +DL E+A A++S FVFQ+ ++ P LT +L+ ++
Sbjct: 880 EISRWYSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQM 939
Query: 1269 YNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIV 1328
A R+ ++ A K++ID E Y + K L++VVY WA G FA IC++TDV EG I+
Sbjct: 940 QECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVFEGSII 998
Query: 1329 RTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
R + RL+E R+ AA +GN+ L K IKRDIVFAASLY+
Sbjct: 999 RCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1046
Score = 40 (19.1 bits), Expect = 2.0e-52, Sum P(2) = 2.0e-52
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1212 EMNSGEELICTECLFENQLDDLEPEE 1237
+ N+ EE E +F N +D L E+
Sbjct: 411 DFNTDEEKKMVEEVFSNAIDCLSDED 436
Score = 40 (19.1 bits), Expect = 6.6e-35, Sum P(2) = 6.6e-35
Identities = 30/109 (27%), Positives = 45/109 (41%)
Query: 864 RLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKTIECIKGE- 922
+L Y M LRVEE ED+ S A+ L+ R Q +T+E E
Sbjct: 71 KLYYPMYNKKLRVEESITEDL---SLAD------------LMPRVKVQSVETVEGCTHEV 115
Query: 923 --PAIEEYYDMYYEAEKYNNQ---ITEAFMQSAHQFLMPGRVLFVKSQT 966
PA E+Y + K + I +AF + A Q + + + V + T
Sbjct: 116 ALPADEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHT 164
Score = 39 (18.8 bits), Expect = 1.5e-93, Sum P(3) = 1.5e-93
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K E+ +F D+
Sbjct: 190 SPIKALSNQKYREMYEEFQDV 210
Score = 37 (18.1 bits), Expect = 4.1e-52, Sum P(2) = 4.1e-52
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 587 YKVCENEAFIPQGWKAAKDAYKR 609
Y +CE +A I K+AK K+
Sbjct: 820 YTLCEKKAQIAIDIKSAKRELKK 842
>ZFIN|ZDB-GENE-040426-2854 [details] [associations]
symbol:skiv2l2 "superkiller viralicidic activity
2-like 2" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0031101 "fin regeneration"
evidence=IMP] [GO:0051781 "positive regulation of cell division"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2854 GO:GO:0005524 GO:GO:0051781 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031101
GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 CTD:23517 HOVERGEN:HBG104255
OrthoDB:EOG4D52WW EMBL:BC061456 IPI:IPI00481753 RefSeq:NP_999933.1
UniGene:Dr.75715 ProteinModelPortal:Q6P7X6 STRING:Q6P7X6
PRIDE:Q6P7X6 GeneID:406795 KEGG:dre:406795 NextBio:20818305
Bgee:Q6P7X6 Uniprot:Q6P7X6
Length = 1034
Score = 590 (212.7 bits), Expect = 4.1e-151, Sum P(3) = 4.1e-151
Identities = 110/192 (57%), Positives = 147/192 (76%)
Query: 394 ALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIK 453
A ++PF LD FQ+EAI ++N SV V+AHTSAGKTV AEYA ALA + R ++T+PIK
Sbjct: 121 AKEYPFILDPFQREAILCIDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIK 180
Query: 454 TISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFD 512
+SNQKYR+ +F DVGL+TGDV++ P ASCL+MTTEILRSMLYRG++++R++ WVIFD
Sbjct: 181 ALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFD 240
Query: 513 EVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKR 572
E+HY+ D ERGVVWEE II+LP +++ V LSATVPN +FA+WI ++ V T R
Sbjct: 241 EIHYMRDSERGVVWEETIILLPDNVHHVFLSATVPNARQFAEWICHLHKQPCHVVYTDYR 300
Query: 573 PVPLEHCLYYSG 584
P PL+H ++ +G
Sbjct: 301 PTPLQHYIFPAG 312
Score = 580 (209.2 bits), Expect = 4.1e-151, Sum P(3) = 4.1e-151
Identities = 129/310 (41%), Positives = 185/310 (59%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
++ + +++ PV+IF FSK C+ A +S +D + EK + + A L D+
Sbjct: 370 IVKMIMERNFQPVIIFSFSKKECEAYALQVSKLDFNTDEEKKLVEEVFNNATDCLSDEDK 429
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
LPQ+ V LL+RGI IHH GLLPI+KE IE+LF G++K LF+TETFAMG+N PARTV
Sbjct: 430 KLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLLKALFATETFAMGINMPARTV 489
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS 855
+F + RKFDG++FR + GEY QM+GRAGRRG+D+ G V+ + DE + K ++ GS
Sbjct: 490 LFTSARKFDGKDFRWISSGEYIQMSGRAGRRGMDERGIVIFMV-DEKMSPAVGKQLLKGS 548
Query: 856 ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKT 915
A L S F LTY M+L+LLRVEE+ E ML++SF +F + +P M+KL +
Sbjct: 549 ADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAVPGVVDR-MKKLEEEYNA 607
Query: 916 IECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVKSQTGQDHLLG 973
I K E ++ YY + + K +I E + + FL PGR++ VK + D G
Sbjct: 608 IRIPK-EESVVTYYKIRQQLAKLGKEIEEFIHKPRYCLPFLQPGRLVKVKKED-LDFGWG 665
Query: 974 AVVKAPSANN 983
VV +N
Sbjct: 666 VVVNFQKKSN 675
Score = 443 (161.0 bits), Expect = 4.1e-151, Sum P(3) = 4.1e-151
Identities = 98/277 (35%), Positives = 156/277 (56%)
Query: 1104 EKKYPQA---LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEHMKLTKENK 1160
+K++P LDP+ D+ +KD L + K +M + H LE KL ++
Sbjct: 759 QKRFPDGIPLLDPIDDMGIKDPALKKVIQKVEAFEHRMYTHPLHSDPNLEAVYKLCEKKA 818
Query: 1161 RHKDEVNTLKFQMSD-EALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEEL 1219
++ K ++ + QM + + R VL+ +G + V+++KGRVACE +SG+EL
Sbjct: 819 LIAGDIKAAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACETSSGDEL 878
Query: 1220 ICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLYNTAIRLGELQ 1279
+ TE +F +DL E+A A++S FVFQ+ P LT +L ++ A R+ ++
Sbjct: 879 LLTEMMFNGLFNDLTAEQATALLSCFVFQENANEMPKLTEQLGGPLRQMQECAKRIAKVS 938
Query: 1280 AHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCR 1339
A K+++D + Y + + L++VVY WA G+ F+ IC++TDV EG I+R + RL+E R
Sbjct: 939 AEAKLEVDEDSYL-NQFRPHLMDVVYTWANGSSFSQICKMTDVFEGSIIRCMRRLEELLR 997
Query: 1340 EFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
+ AA +GN+ L K T IKRDIVFAASLY+
Sbjct: 998 QMCQAAKAIGNTELENKFATGITKIKRDIVFAASLYL 1034
Score = 50 (22.7 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 587 YKVCENEAFIPQGWKAAKDAYKR 609
YK+CE +A I KAAK K+
Sbjct: 811 YKLCEKKALIAGDIKAAKRELKK 833
Score = 41 (19.5 bits), Expect = 8.1e-52, Sum P(3) = 8.1e-52
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 1334 LDETCREFRNAAAIMGNSALYKKMETASNAIK 1365
L+++ +F++ A+ G KK+E NAI+
Sbjct: 578 LEKSFYQFQHYRAVPGVVDRMKKLEEEYNAIR 609
Score = 39 (18.8 bits), Expect = 5.2e-93, Sum P(3) = 5.2e-93
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K E+ +F D+
Sbjct: 177 SPIKALSNQKYREMYEEFQDV 197
Score = 37 (18.1 bits), Expect = 8.1e-52, Sum P(3) = 8.1e-52
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 1212 EMNSGEELICTECLFENQLDDLEPEE 1237
+ N+ EE E +F N D L E+
Sbjct: 403 DFNTDEEKKLVEEVFNNATDCLSDED 428
>TAIR|locus:2026001 [details] [associations]
symbol:MTR4 "homolog of yeast MTR4" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IMP]
[GO:0031125 "rRNA 3'-end processing" evidence=IMP] [GO:0000398
"mRNA splicing, via spliceosome" evidence=RCA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0010074 "maintenance of
meristem identity" evidence=RCA] [GO:0010212 "response to ionizing
radiation" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0030422 "production of
siRNA involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
EMBL:AC007258 UniGene:At.74832 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0031125 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:AK176836 IPI:IPI00536033 PIR:E96621
RefSeq:NP_176185.1 UniGene:At.43462 ProteinModelPortal:Q9XIF2
SMR:Q9XIF2 PaxDb:Q9XIF2 PRIDE:Q9XIF2 EnsemblPlants:AT1G59760.1
GeneID:842269 KEGG:ath:AT1G59760 TAIR:At1g59760 InParanoid:Q9XIF2
PhylomeDB:Q9XIF2 ProtClustDB:CLSN2679700 ArrayExpress:Q9XIF2
Genevestigator:Q9XIF2 Uniprot:Q9XIF2
Length = 988
Score = 628 (226.1 bits), Expect = 5.5e-147, Sum P(3) = 5.5e-147
Identities = 118/204 (57%), Positives = 152/204 (74%)
Query: 382 IADRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATK 441
+A H P A DFPF LD+FQ EAI L+NG+SV V+AHTSAGKTVVA YA A++ K
Sbjct: 51 LAPSVHNKPP--AKDFPFTLDSFQSEAIKCLDNGESVMVSAHTSAGKTVVASYAIAMSLK 108
Query: 442 HCTRAVYTAPIKTISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGA 500
R +YT+PIK +SNQKYRDF +F DVGL+TGDV++ P ASCL+MTTEILRSM Y+G+
Sbjct: 109 ENQRVIYTSPIKALSNQKYRDFKEEFSDVGLMTGDVTIDPNASCLVMTTEILRSMQYKGS 168
Query: 501 DIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTK 560
+I+R++ W+IFDEVHY+ D ERGVVWEE I+M P++ V LSATVPN EFADW+ +
Sbjct: 169 EIMREVAWIIFDEVHYMRDSERGVVWEESIVMAPKNSRFVFLSATVPNAKEFADWVAKVH 228
Query: 561 QKKIRVTGTTKRPVPLEHCLYYSG 584
Q+ + T RP PL+H ++ +G
Sbjct: 229 QQPCHIVYTDYRPTPLQHYVFPAG 252
Score = 558 (201.5 bits), Expect = 5.5e-147, Sum P(3) = 5.5e-147
Identities = 150/471 (31%), Positives = 257/471 (54%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
L+ + ++ PV++F FSK C+ LA MS + L S EK + A L D+
Sbjct: 311 LVKMIIQRQYDPVILFSFSKKECEALAMQMSKMVLNSDDEKDAVETIFASAIDMLSDDDK 370
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
LPQ+ + +L+RGI +HH+GLLPI+KEVIE+LF G++K LF+TETF++G+N PA+TV
Sbjct: 371 KLPQVSNILPILKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTV 430
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS 855
VF N+RKFDG +FR L GEY QM+GRAGRRG+DK G + +L DE + K ++ GS
Sbjct: 431 VFTNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRG-ICILMVDEKMEPAVAKSMLKGS 489
Query: 856 ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKT 915
A L S F L+Y M+L+ LR EE E++L+ SF +F + + +P+ ++ + + L + +
Sbjct: 490 ADSLNSAFHLSYNMLLNQLRCEEGDPENLLRNSFFQFQADRAIPDLEKQI-KSLEEERDS 548
Query: 916 IECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVKSQTGQDHLLG 973
+ I+ E +++ YY++ + + I E + FL+P R + + T D
Sbjct: 549 L-VIEEEESLKNYYNLILQYKSLKKDIREIVFTPKYCLPFLLPNRAVCLDC-TNDDE--- 603
Query: 974 AVVKAPSANNKEYIVMLLKPD-LPSASETSLDKKSGDFSEGYFVIPK---SKRGLEEEYC 1029
++ S +++ +++K + + S SE ++ D + V+ + SK G+ ++
Sbjct: 604 -EPQSFSIEDQDTWGVIMKFNKVKSLSEDDDSRRPEDANYTVDVLTRCMVSKDGVGKKKV 662
Query: 1030 GSVSHRKGSGVINIKLPYHGAAAGVSYEVRGIDKK--ELLCICNCKIKIDQV------GL 1081
+V ++ + + +P +S + I K L N K+ ++ G+
Sbjct: 663 KAVPIKERGEPVVVTVPL-SQIKSLSSAIMNIPKDLVPLEARENALKKVSELLSRHPDGI 721
Query: 1082 LED------VSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVE 1126
D + S+++ KTV++L L++ +K+ A P+ KLK + + E
Sbjct: 722 PLDPEVDMKIKSSSYKKTVRRLEALENLFEKHKIAKSPLITEKLKVLQMKE 772
Score = 380 (138.8 bits), Expect = 5.5e-147, Sum P(3) = 5.5e-147
Identities = 91/267 (34%), Positives = 152/267 (56%)
Query: 1111 LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEHMKLTKENKRHKDEVNTLK 1170
LDP D+K+K + + + L +K + E +K+ + + ++ +LK
Sbjct: 723 LDPEVDMKIKSSSYKKTVRRLEALENLFEKHKIAKSPLITEKLKVLQMKEELIAKIKSLK 782
Query: 1171 FQM-SDEALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQ 1229
+ S AL + + R VL+ +G I +D VV++KG+VACE++S EEL TE +F
Sbjct: 783 KTVRSSTALAFKDELKARKRVLRRLGYITSDNVVELKGKVACEISSAEELTLTELMFSGI 842
Query: 1230 LDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLYNTAIRLGELQAHFKVQIDPE 1289
D + EE V+++S FV+++R +L + +L +TA R+ E+Q KV+ID E
Sbjct: 843 FKDAKVEELVSLLSCFVWRERLPDAAKPREELDLLFIQLQDTARRVAEVQLDCKVEIDVE 902
Query: 1290 EYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMG 1349
+ + + + ++E VY WAKG+ F ++ E+ V EG ++R I R++E ++ AA +G
Sbjct: 903 SFVQ-SFRPDIMEAVYAWAKGSKFYEVMEIARVFEGSLIRAIRRMEEVLQQLIVAAKSIG 961
Query: 1350 NSALYKKMETASNAIKRDIVFAASLYI 1376
+ L K+E A + IKRDIVFAASLY+
Sbjct: 962 ETQLEAKLEEAVSKIKRDIVFAASLYL 988
Score = 41 (19.5 bits), Expect = 2.6e-84, Sum P(3) = 2.6e-84
Identities = 28/120 (23%), Positives = 46/120 (38%)
Query: 130 VSELMLGAQDSGPLPRVAGPAKDFVRGSINSRPFRPGGLEDSQSLERILPDGASNGEWVQ 189
++E ++G P P V ++ F P L+ QS E I NGE V
Sbjct: 31 INEELVGCVHDVSFPENYVPLAPSVHNKPPAKDF-PFTLDSFQS-EAI--KCLDNGESVM 86
Query: 190 EILKGGPAQVVPPSFKQGLDLGELQAYPCLWNVYKDQDQSSLKSTSDEKLNELSVQFDDL 249
+ V S+ + L E Q +Y S +K+ S++K + +F D+
Sbjct: 87 VSAHTSAGKTVVASYAIAMSLKENQRV-----IYT----SPIKALSNQKYRDFKEEFSDV 137
>TAIR|locus:2063648 [details] [associations]
symbol:HEN2 "hua enhancer 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0010093
"specification of floral organ identity" evidence=IMP] [GO:0016070
"RNA metabolic process" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=RCA]
[GO:0003002 "regionalization" evidence=RCA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0030422 "production of siRNA involved in
RNA interference" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0003676 GO:GO:0010093
GO:GO:0016070 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AC005171 GO:GO:0003724 HOGENOM:HOG000163047
KO:K12598 InterPro:IPR025696 Pfam:PF13234 EMBL:BT005794
IPI:IPI00539432 PIR:B84481 RefSeq:NP_565338.1 UniGene:At.20667
ProteinModelPortal:Q9ZVW2 SMR:Q9ZVW2 IntAct:Q9ZVW2 PRIDE:Q9ZVW2
EnsemblPlants:AT2G06990.1 GeneID:815269 KEGG:ath:AT2G06990
TAIR:At2g06990 InParanoid:Q9ZVW2 OMA:TFDRVCD PhylomeDB:Q9ZVW2
ProtClustDB:CLSN2688028 ArrayExpress:Q9ZVW2 Genevestigator:Q9ZVW2
Uniprot:Q9ZVW2
Length = 995
Score = 573 (206.8 bits), Expect = 7.1e-144, Sum P(3) = 7.1e-144
Identities = 112/222 (50%), Positives = 153/222 (68%)
Query: 392 DLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAP 451
D+A +PF+LD FQ ++ LE +S+ V+AHTSAGKT VAEYA A+A + R +YT+P
Sbjct: 73 DMAKTYPFKLDPFQSVSVACLERKESILVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 132
Query: 452 IKTISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVI 510
+K +SNQKYR+ +F DVGL+TGDV+L P ASCL+MTTEILR+MLYRG+++++++ WVI
Sbjct: 133 LKALSNQKYRELQHEFKDVGLMTGDVTLSPNASCLVMTTEILRAMLYRGSEVLKEVAWVI 192
Query: 511 FDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTT 570
FDE+HY+ D ERGVVWEE II LP I +V LSAT+ N EFA+WI ++ V T
Sbjct: 193 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICYLHKQPCHVVYTD 252
Query: 571 KRPVPLEHCLYY--SGEFYKVCE-NEAFIPQGWKAAKDAYKR 609
RP PL+H + G Y V + NE F + +D + +
Sbjct: 253 FRPTPLQHYAFPMGGGGLYLVVDDNEQFREDSFVKMQDTFPK 294
Score = 520 (188.1 bits), Expect = 7.1e-144, Sum P(3) = 7.1e-144
Identities = 120/339 (35%), Positives = 193/339 (56%)
Query: 642 RGKQNKHSVVGIKNSGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNHCDKL 701
+ K S G G++ G S+V ++ + ++ PV+IF FS+ C++
Sbjct: 296 KSNDGKKSANGKSGGRGAKGGGGPGDSDV---YKIVKMIMERKFEPVIIFSFSRRECEQH 352
Query: 702 ADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPI 761
A MS +D + EK + + A L DR+LP I + LL+RGIA+HH+GLLP+
Sbjct: 353 ALSMSKLDFNTDEEKEVVEQVFNNAMQCLNEEDRSLPAIELMLPLLQRGIAVHHSGLLPV 412
Query: 762 VKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMAG 821
+KE++E+LF G+VK LF+TETFAMG+N PA+TVVF ++K+DG R + GEY QM+G
Sbjct: 413 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 472
Query: 822 RAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLL-RVE-EL 879
RAGRRG D+ G +++ DE + L+ +++G L S FRL+Y IL+LL R E +
Sbjct: 473 RAGRRGKDERGICIIMI-DEQMEMNTLRDMMLGKPAPLLSTFRLSYYTILNLLSRAEGQF 531
Query: 880 KVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKTIECIKGEPAIEEYYDMYYEAEKYN 939
E +++ SF +F +K LP+ + KL + + GE + EY+++ ++ K+
Sbjct: 532 TAEHVIRHSFHQFQHEKALPDIGNKVS-KLEEEAAILNA-SGEAEVAEYHNLQFDIAKHE 589
Query: 940 NQITEAFMQSAHQ--FLMPGRVLFVKSQTGQDHLLGAVV 976
++ ++ FL GR++ ++ + G D G VV
Sbjct: 590 KKLMSEIIRPERVLCFLDTGRLVKIR-EGGTDWGWGVVV 627
Score = 451 (163.8 bits), Expect = 7.1e-144, Sum P(3) = 7.1e-144
Identities = 98/284 (34%), Positives = 169/284 (59%)
Query: 1097 LLVLKSDEKKYPQA---LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEHM 1153
LL L+ ++P L PVKD+ ++D +V+ + + +K+ A+ H + ++ +
Sbjct: 713 LLALQELSSRFPLGFPKLHPVKDMNIQDTEIVDLVSQIEEVEQKLLAHPMHKS-EDDQQI 771
Query: 1154 KLTKENKRHKDEVNTLKFQMSDEALQQMPD-FQGRIDVLKEIGCIDADLVVQIKGRVACE 1212
K + E+ LK +M D LQ+ D + R VLK++G IDAD VVQ+KGR AC
Sbjct: 772 KSFQRKAEVNYEIQQLKSKMRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQVKGRAACL 831
Query: 1213 MNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLYNTA 1272
+++G+EL+ TE +F +DL+ + A+ S F+ ++ + +L +L+ ++L ++A
Sbjct: 832 IDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSNEQVNLRNELTKPLQQLQDSA 891
Query: 1273 IRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIV 1332
++ E+Q K++ID EEY ++ L++V+Y W+KG FA+I ++TD+ EG I+R+
Sbjct: 892 RKIAEIQHECKLEIDVEEYVESTIRPFLMDVIYSWSKGASFAEIIQMTDIFEGSIIRSAR 951
Query: 1333 RLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
RLDE + R AA +G S+L K AS +++R I+FA SLY+
Sbjct: 952 RLDEFLNQLRAAAEAVGESSLESKFAAASESLRRGIMFANSLYL 995
Score = 43 (20.2 bits), Expect = 1.4e-87, Sum P(3) = 1.4e-87
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S LK+ S++K EL +F D+
Sbjct: 131 SPLKALSNQKYRELQHEFKDV 151
Score = 41 (19.5 bits), Expect = 5.9e-37, Sum P(3) = 5.9e-37
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 369 QKEAWVVSGSTEAIADRFHELVPDLA 394
++EA +++ S EA +H L D+A
Sbjct: 561 EEEAAILNASGEAEVAEYHNLQFDIA 586
>FB|FBgn0001986 [details] [associations]
symbol:l(2)35Df "lethal (2) 35Df" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG4581 GeneTree:ENSGT00690000102230 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:AF145638
RefSeq:NP_524929.1 UniGene:Dm.1748 SMR:Q9Y134 MINT:MINT-942655
STRING:Q9Y134 EnsemblMetazoa:FBtr0080760 GeneID:48782
KEGG:dme:Dmel_CG4152 UCSC:CG4152-RA FlyBase:FBgn0001986
InParanoid:Q9Y134 OrthoDB:EOG4K3JB5 GenomeRNAi:48782 NextBio:839548
Uniprot:Q9Y134
Length = 1055
Score = 581 (209.6 bits), Expect = 4.1e-143, Sum P(3) = 4.1e-143
Identities = 106/192 (55%), Positives = 146/192 (76%)
Query: 394 ALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIK 453
A ++PF LD FQ++AI ++N SV V+AHTSAGKTVVAEYA A + R +YT PIK
Sbjct: 145 AKEYPFVLDPFQRQAILCIDNSQSVLVSAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIK 204
Query: 454 TISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFD 512
+SNQK+R+F+ +F DVGL+TGDV++ P ASCLIMTTEILR+MLYRG++I+R++ WV+FD
Sbjct: 205 ALSNQKFREFTDEFKDVGLVTGDVTINPSASCLIMTTEILRNMLYRGSEIMREVGWVVFD 264
Query: 513 EVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKR 572
E+HY+ D ERGVVWEE +I+LP ++ V LSAT+PN +FA+W+ ++ V T R
Sbjct: 265 EIHYMRDKERGVVWEETLILLPDNVRYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDYR 324
Query: 573 PVPLEHCLYYSG 584
P PL+H ++ +G
Sbjct: 325 PTPLQHYIFPAG 336
Score = 575 (207.5 bits), Expect = 4.1e-143, Sum P(3) = 4.1e-143
Identities = 137/338 (40%), Positives = 197/338 (58%)
Query: 641 NRGKQNKHSVVGIKNSGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNHCDK 700
N G+ K G GG + G + +I+ ++ + +++ PV+IF FSK C+
Sbjct: 364 NAGEAGKGDQKG--RHGGIK---GTNAGQTNIF-KIVKMIMERNFAPVIIFSFSKKDCEI 417
Query: 701 LADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLP 760
A M+ +D + EK + + A L DR LPQ+ V LLRRGI IHH GLLP
Sbjct: 418 YAMQMAKLDFNTPDEKKLVDEVFNNAMDVLTEEDRRLPQVENVLPLLRRGIGIHHGGLLP 477
Query: 761 IVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMA 820
I+KE IE+LF G++K LF+TETFAMG+N PARTV+F RKFDG++FR + GEY QMA
Sbjct: 478 ILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKKFRWISSGEYIQMA 537
Query: 821 GRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLLRVEELK 880
GRAGRRGLD G +V+L DE + + I+ G A + S F LTY M+L+LLRVEE+
Sbjct: 538 GRAGRRGLDDKG-IVILMIDEKVSPAVGRDIVQGKADPINSAFHLTYNMVLNLLRVEEIN 596
Query: 881 VEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKTIECIKGEPAIEEYYDMYYEAEKYNN 940
E ML+RSF +F +Q LP + +K + K IK E I Y+ + + +++
Sbjct: 597 PEYMLERSFYQFQNQAALPGLHDQVEQKTLELNKLT--IKDEHNIASYHHIRSQLDQHGK 654
Query: 941 QITEAFMQSAH--QFLMPGRVLFVKSQTGQDHLLGAVV 976
Q + + + FL PGR++ V + + Q++ G V+
Sbjct: 655 QFRQWITKPQYLLPFLQPGRLVKVAAGS-QEYDWGIVL 691
Score = 383 (139.9 bits), Expect = 4.1e-143, Sum P(3) = 4.1e-143
Identities = 91/298 (30%), Positives = 163/298 (54%)
Query: 1084 DVSSAAFSKTVQQLLVLKSDEKKYP---QALDPVKDLKLKDMNLVEAYYKWAGLLRKMAA 1140
D+ SA + V L ++ +K++P L+P+ D+ +KD + + +++
Sbjct: 762 DLRSADNRRAV--LKTIQEAKKRFPLGPPVLNPIDDMNIKDREFRDIVNTISQFEKRLEE 819
Query: 1141 NKCHGCIKLEEHMKLTKENKRHKDEVNTLKFQM-SDEALQQMPDFQGRIDVLKEIG-CID 1198
+ H +LE + ++ + ++ LK ++ + +L QM + + R VL+ +G C
Sbjct: 820 HPLHKSPELERIHRRYQDKVTLQKQLQDLKAELKAARSLLQMDELKHRKRVLRRMGYCKP 879
Query: 1199 ADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLT 1258
D V++ KGRVACE++S +EL+ TE +F +DL +AVA++S FV ++++
Sbjct: 880 GD-VIEFKGRVACELSSADELLMTEMIFNGVFNDLTAPQAVALLSCFVCDEKSSESVKSA 938
Query: 1259 PKLSVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICE 1318
+LS + + A R+ ++ K+ +D + Y D K L++VV W KG+ F +C+
Sbjct: 939 TELSGPLRSMQDLARRIAKVSTECKLDLDADTYV-DKFKPFLMDVVLAWCKGSSFLAVCK 997
Query: 1319 LTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
+TD+ EG I+R + RL+E R+ A+ +GN+ L K +KRDIVFAASLY+
Sbjct: 998 MTDIFEGSIIRCMRRLEELLRQMCQASKTIGNTDLENKFSEGIRLLKRDIVFAASLYL 1055
>WB|WBGene00012342 [details] [associations]
symbol:mtr-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0040011 InterPro:IPR018247
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0040020 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0040022 GO:GO:0008026 eggNOG:COG4581 EMBL:Z70271 PIR:T26282
RefSeq:NP_501757.1 ProteinModelPortal:Q23223 SMR:Q23223
MINT:MINT-6670291 STRING:Q23223 PaxDb:Q23223 EnsemblMetazoa:W08D2.7
GeneID:177824 KEGG:cel:CELE_W08D2.7 CTD:177824 WormBase:W08D2.7
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 InParanoid:Q23223
KO:K12598 OMA:ENFQKAM NextBio:898538 InterPro:IPR025696
Pfam:PF13234 Uniprot:Q23223
Length = 1026
Score = 589 (212.4 bits), Expect = 5.6e-142, Sum P(3) = 5.6e-142
Identities = 109/196 (55%), Positives = 147/196 (75%)
Query: 397 FPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTIS 456
+PF+LD FQK+AI ++N SV V+AHTSAGKTVVA YA A + R +YT+PIK +S
Sbjct: 122 YPFQLDAFQKQAILCIDNNQSVLVSAHTSAGKTVVATYAIAKCLREKQRVIYTSPIKALS 181
Query: 457 NQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVH 515
NQKYR+ +F DVGL+TGDV+L P+ASCL+MTTEILRSMLYRG++I++++ WV++DE+H
Sbjct: 182 NQKYRELEEEFKDVGLMTGDVTLNPDASCLVMTTEILRSMLYRGSEIMKEVGWVVYDEIH 241
Query: 516 YVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVP 575
Y+ D ERGVVWEE II++ ++I LSAT+PN +FA W+ KQ+ + V T RP P
Sbjct: 242 YMRDKERGVVWEETIILMSKNIKQAFLSATIPNARQFAQWVASIKQQPVNVVYTDYRPTP 301
Query: 576 LEHCLY-YSGE-FYKV 589
L+H +Y GE Y+V
Sbjct: 302 LQHWIYPVGGEGMYEV 317
Score = 550 (198.7 bits), Expect = 5.6e-142, Sum P(3) = 5.6e-142
Identities = 127/327 (38%), Positives = 187/327 (57%)
Query: 647 KHSVVGIKNSGGSQNNWGLRRSEV-----SIWLTLINKLSKKSLLPVVIFCFSKNHCDKL 701
+ ++ G+ +G S ++ RR+ S L +I ++ L ++F FS+ C+
Sbjct: 330 RDAMSGLATAGDSAGSFNKRRTGGGTQGDSNVLKIIRSVASNDGLNCIVFSFSRKECESY 389
Query: 702 ADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPI 761
A + +D EK ++ + A ++L D+ LPQI+ + LLRRGI +HH+GL+PI
Sbjct: 390 AISLKDMDFNKDHEKGMVKSVYESAIAQLSPEDQKLPQILNILPLLRRGIGVHHSGLMPI 449
Query: 762 VKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMAG 821
+KE IE+LF G+VKVLF+TETF+MG+N PARTVVF + RKFDG + R + GEY QMAG
Sbjct: 450 LKETIEILFGEGLVKVLFATETFSMGLNMPARTVVFTSARKFDGSDNRYITSGEYIQMAG 509
Query: 822 RAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLLRVEELKV 881
RAGRRG D GTV+++ D D K II G+ L SQFRLTY M+L+L+RVE + V
Sbjct: 510 RAGRRGKDDRGTVILMV-DSAMSADDAKQIIKGATDPLNSQFRLTYNMVLNLMRVEGMAV 568
Query: 882 EDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKTIECIK--GEPAIEEYYDMYYEAEKYN 939
++ SF +F S K+PE + +K Q + I E + D+ + E
Sbjct: 569 SWIINNSFHQFQSYAKIPE----IDKKCVQVERKIASFNFPWENEMRTLVDLQDQLEATR 624
Query: 940 NQITEAFMQSAH--QFLMPGRVLFVKS 964
+I + + + FL GR+ VKS
Sbjct: 625 QRIIQIQREPKYIVGFLHAGRLFKVKS 651
Score = 387 (141.3 bits), Expect = 5.6e-142, Sum P(3) = 5.6e-142
Identities = 89/270 (32%), Positives = 152/270 (56%)
Query: 1111 LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEHMKLTKENKRHKD---EVN 1167
LDP++D+++K + + E + L ++ + H K + L K+ ++ +D E+N
Sbjct: 762 LDPIQDMEIKTVEMKELIAREKSLEGRL---ETHSMTKRDNMKDLKKQFEQKQDAVKELN 818
Query: 1168 TLKFQM-SDEALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEELICTECLF 1226
LK + S ++ + + R VL+ +G + D + +KG VACE+++ +ELI TE L
Sbjct: 819 ALKAERKSVQSTLHLEELNNRKRVLRRLGYLGNDDALVLKGSVACELSASDELILTEMLL 878
Query: 1227 ENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLYNTAIRLGELQAHFKVQI 1286
+ + L+ + A++S FVFQ + + P L +L L+ A + ++ K+++
Sbjct: 879 KGIFNTLDVAQTAALLSCFVFQDK-CAAPKLATELQTCLSELHEQARNVAKVSNECKMEV 937
Query: 1287 DPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAA 1346
++Y + GL++VVY+W G F++I + TDV EG I+RT+ RL+E RE NAA
Sbjct: 938 MEDKYV-SSFNPGLMDVVYQWVNGATFSEIVKTTDVFEGSIIRTLRRLEEVLREMINAAK 996
Query: 1347 IMGNSALYKKMETASNAIKRDIVFAASLYI 1376
+ N L +K E A +KRDIVFAASLY+
Sbjct: 997 ALANKELEQKFEDARKNLKRDIVFAASLYL 1026
Score = 42 (19.8 bits), Expect = 4.8e-84, Sum P(3) = 4.8e-84
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K EL +F D+
Sbjct: 175 SPIKALSNQKYRELEEEFKDV 195
>UNIPROTKB|G4NH56 [details] [associations]
symbol:MGG_03931 "FRQ-interacting RNA helicase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0031499 GO:GO:0043629
GO:GO:0071035 GO:GO:0071038 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000467 GO:GO:0071042
GO:GO:0071051 GO:GO:0008143 GO:GO:0034459 GO:GO:0034475
GO:GO:0034476 KO:K12598 InterPro:IPR025696 Pfam:PF13234
GO:GO:0071049 RefSeq:XP_003719933.1 EnsemblFungi:MGG_03931T0
GeneID:2677161 KEGG:mgr:MGG_03931 Uniprot:G4NH56
Length = 1102
Score = 570 (205.7 bits), Expect = 1.8e-141, Sum P(4) = 1.8e-141
Identities = 107/199 (53%), Positives = 144/199 (72%)
Query: 387 HELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRA 446
H+ + A + F+LD FQ ++ +E +SV V+AHTSAGKTVVAEYA A K R
Sbjct: 163 HKPPEEPARKYAFKLDPFQSISVASIERDESVLVSAHTSAGKTVVAEYAIAHCLKRNQRV 222
Query: 447 VYTAPIKTISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRD 505
+YT+PIK +SNQK+RDF +F DVGL+TGDV++ P ASCL+MTTEILRSMLYRG++I R+
Sbjct: 223 IYTSPIKALSNQKFRDFQAEFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEITRE 282
Query: 506 IEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIR 565
+ WV+FDE+HY+ D RGVVWEE IIMLP + V LSAT+PN +FA+WI + ++
Sbjct: 283 VGWVVFDEIHYMRDATRGVVWEETIIMLPDKVRYVFLSATIPNAFQFAEWIAKIHRQACH 342
Query: 566 VTGTTKRPVPLEHCLYYSG 584
V T RP PL++ ++ +G
Sbjct: 343 VVYTDFRPTPLQNYVFPAG 361
Score = 549 (198.3 bits), Expect = 1.8e-141, Sum P(4) = 1.8e-141
Identities = 117/304 (38%), Positives = 184/304 (60%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
+I + +++ PV++F FSK C+ LA +S ++ SE+ + A L D+
Sbjct: 424 IIKMIMRRAYHPVIVFNFSKRECENLALKVSTLNFNHESEQKLVEDIFRNAIMSLSEEDQ 483
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
LPQI + LL++GI +HH+GLLPI+KE IE+LF ++KVLF+TETF++G+N PA+TV
Sbjct: 484 GLPQIQHLLPLLKKGIGVHHSGLLPILKETIEILFQENLIKVLFATETFSIGLNMPAKTV 543
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS 855
VF ++KFDG + R L P EY QM+GRAGRRGLD G V+++ D++ E+ K ++ G
Sbjct: 544 VFSQVKKFDGVKERPLTPSEYIQMSGRAGRRGLDDRGIVIMMIDDKLDPET-AKGMVCGQ 602
Query: 856 ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKT 915
RL S F L Y MIL+L R+E + + ML+R F +F + +P ++ L+ Q +
Sbjct: 603 QDRLNSAFHLGYNMILNLQRIETVSPQYMLERCFYQFQNASSVPALEKKLIE--LQQQRD 660
Query: 916 IECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH---QFLMPGRVLFVKSQTGQDHLL 972
I E +++Y+ + + E Y + EA +Q + +F+ PGR++ +K+ G D
Sbjct: 661 AMVIPDESTVKDYHTVRQQIEAYKKDM-EAVIQHPNNCLEFMQPGRLIRIKTPDGVDFDW 719
Query: 973 GAVV 976
G VV
Sbjct: 720 GVVV 723
Score = 414 (150.8 bits), Expect = 1.8e-141, Sum P(4) = 1.8e-141
Identities = 100/315 (31%), Positives = 165/315 (52%)
Query: 1068 CICNCKIKIDQVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQA---LDPVKDLKLKDMNL 1124
C+ C + I Q+ + K+ Q L+ ++++P LDP++++ +KD +
Sbjct: 791 CLLTCMVAISQIRIFMPKDMDHLGKS-QVSHGLEEVQRRFPDGVPILDPIENMGIKDDSF 849
Query: 1125 VEAYYKWAGLLRKMAANKCHGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDE-ALQQMPD 1183
+ K L ++ +N HG L E K ++ K ++ ++ Q+ +
Sbjct: 850 KKLMRKIEVLESRLLSNPLHGSPNLPELWDKYKIKTELTSQIKETKRAINKSYSIAQLDE 909
Query: 1184 FQGRIDVLKEIGCIDADLVVQIKGRVACEMNS--GEELICTECLFENQLDDLEPEEAVAI 1241
+ R+ VL+ + I+ + VVQ+K RVACE++S G EL+ +E LF ++LEPE AI
Sbjct: 910 LKSRMRVLRRLNFINENEVVQMKARVACEISSTEGHELVISELLFNGFFNELEPEVCAAI 969
Query: 1242 MSAFVFQQRNTSEPSLTPKLSVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLV 1301
+S FVF ++ P L L ++ A + + K+ + E+ NLK+ L
Sbjct: 970 LSCFVFDEKMEGTP-LKEDLDKLVREIHAQAKTIARISRESKLDVSDEQVV-GNLKWQLT 1027
Query: 1302 EVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETAS 1361
E V WAKG PFA+IC++T+ EG +VR + RL+E R+ A +MG+ L KK E A
Sbjct: 1028 ETVLAWAKGRPFAEICKMTNAYEGSLVRIMRRLEELLRQMAEAGKVMGSEMLQKKFEKAL 1087
Query: 1362 NAIKRDIVFAASLYI 1376
+ I RD+V AASLY+
Sbjct: 1088 SLISRDVVSAASLYL 1102
Score = 46 (21.3 bits), Expect = 4.6e-50, Sum P(3) = 4.6e-50
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 894 SQKKLPEQQQLLMRKLAQPPKTIECIKGEPAIEEYYDMYYEAEKYNNQITE 944
S KKL + ++L +L P + G P + E +D Y + +QI E
Sbjct: 848 SFKKLMRKIEVLESRLLSNP-----LHGSPNLPELWDKYKIKTELTSQIKE 893
Score = 40 (19.1 bits), Expect = 1.8e-141, Sum P(4) = 1.8e-141
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 115 RRQTKQGKWEPNSVDVSELMLGAQDSGPLPRVAGPAKDFVRGSINSRPFR-PGGLEDSQS 173
+R + K + D LGAQD+G + P +D V + ++P G E+S S
Sbjct: 35 KRDKSKDKSKKRKADGHVKNLGAQDNGAEAQ-PDPQED-VEMANGTQPSTGDAGSEESSS 92
Query: 174 LE 175
E
Sbjct: 93 DE 94
Score = 38 (18.4 bits), Expect = 1.8e-85, Sum P(4) = 1.8e-85
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K + +F D+
Sbjct: 226 SPIKALSNQKFRDFQAEFGDV 246
>CGD|CAL0003794 [details] [associations]
symbol:orf19.1335 species:5476 "Candida albicans" [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0034459 "ATP-dependent
3'-5' RNA helicase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA] [GO:0034476
"U5 snRNA 3'-end processing" evidence=IEA] [GO:0071049 "nuclear
retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IEA] [GO:0000467 "exonucleolytic trimming
to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IEA] [GO:0043629 "ncRNA polyadenylation"
evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
processing" evidence=IEA] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IEA]
[GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic
process" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003794 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581
EMBL:AACQ01000188 EMBL:AACQ01000187 KO:K12598 InterPro:IPR025696
Pfam:PF13234 RefSeq:XP_711657.1 RefSeq:XP_711675.1
RefSeq:XP_888948.1 STRING:Q59PN6 GeneID:3646717 GeneID:3646739
GeneID:3703907 KEGG:cal:CaO19.1335 KEGG:cal:CaO19.8915
KEGG:cal:CaO19_1335 Uniprot:Q59PN6
Length = 1106
Score = 576 (207.8 bits), Expect = 6.0e-141, Sum P(3) = 6.0e-141
Identities = 134/327 (40%), Positives = 187/327 (57%)
Query: 641 NRGKQNKHSVVGIKNSGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNHCDK 700
N G S G N G N + ++ + K PV++F FSK C+
Sbjct: 398 NSGDDPASSDSGRGNKKGKTNKGRNHQDGKGDIYKIVKMIYMKKYNPVIVFSFSKRDCES 457
Query: 701 LADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLP 760
LA MS +D + E++ + A L +DR LPQI + LL+RGI IHH+GLLP
Sbjct: 458 LALKMSKLDFNTDEERNSLTQIFYNAIELLPEADRELPQIKNILPLLKRGIGIHHSGLLP 517
Query: 761 IVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMA 820
I+KE+IE+LF G +KVLF+TETF++G+N PA+TVVF ++RK+DG FR + GEY QM+
Sbjct: 518 ILKEIIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDGVGFRWVSGGEYIQMS 577
Query: 821 GRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLLRVEELK 880
GRAGRRGLD G V+++ DE K ++ G A RL+S F L Y MIL+L+RVE +
Sbjct: 578 GRAGRRGLDDRGIVIMMI-DEKMEPQVAKGMVKGQADRLDSAFHLGYNMILNLMRVEGIS 636
Query: 881 VEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKTIE--CIKGEPAIEEYYDMYYEAEKY 938
E ML+ SF +F +P +L KLAQ + I+ EP I++YYD+ + KY
Sbjct: 637 PEFMLEHSFFQFQKASSVP----ILEGKLAQCKQEFADITIEDEPIIKDYYDLKQQLLKY 692
Query: 939 NNQITEAFMQSAH--QFLMPGRVLFVK 963
N + + + FL GRV+ VK
Sbjct: 693 NEDVRKVITHPGNILPFLQDGRVIKVK 719
Score = 571 (206.1 bits), Expect = 6.0e-141, Sum P(3) = 6.0e-141
Identities = 106/192 (55%), Positives = 142/192 (73%)
Query: 394 ALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIK 453
A +PF LD FQ AI ++ +SV V+AHTSAGKTVVAEYA A + + R +YT+PIK
Sbjct: 178 ARTYPFTLDPFQDTAISCIDRNESVLVSAHTSAGKTVVAEYAIAQSLRDKQRVIYTSPIK 237
Query: 454 TISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFD 512
+SNQK+R+ F DVGL+TGDV++ P+A CL+MTTEILRSMLYRG++++R++ WV+FD
Sbjct: 238 ALSNQKFRELQAIFGDVGLMTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVAWVVFD 297
Query: 513 EVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKR 572
EVHY+ D RGVVWEE II+LP ++ V LSAT+PN +EFA+WI + + V T R
Sbjct: 298 EVHYMRDKSRGVVWEETIILLPDKVHYVFLSATIPNAMEFAEWIVKIHNQPCHVVYTDFR 357
Query: 573 PVPLEHCLYYSG 584
P PL+H L+ +G
Sbjct: 358 PTPLQHYLFPAG 369
Score = 374 (136.7 bits), Expect = 6.0e-141, Sum P(3) = 6.0e-141
Identities = 90/309 (29%), Positives = 171/309 (55%)
Query: 1073 KIKIDQVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQAL---DPVKDLKLKDMNLVEAYY 1129
KI ++ + +D S+ +T+ + LK K+ P + DPV+ +K+ D + +
Sbjct: 802 KISTVRLRVPDDYKSSTAKRTLVK--TLKDLPKRLPDGIPLIDPVQSMKITDDDFKKLLQ 859
Query: 1130 KWAGLLRKMAANKCHGCIKLEE-HMKLTKENKRHKDEVNTLKFQMSD-EALQQMPDFQGR 1187
K L K+ +N + +L++ + K T + + +++ L+ Q+ +++ Q+
Sbjct: 860 KIDILDSKIVSNPLNNSARLDDLYAKYTAKVDLN-NQIKKLEEQIFQAKSIIQLDQLSNM 918
Query: 1188 IDVLKEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVF 1247
VLK++ ++ VV++KGRVA E+++G+EL+ TE LF ++L P++ ++SAF+F
Sbjct: 919 KRVLKKLEFTGSEEVVELKGRVAAELSTGDELMITELLFSGFFNELTPQQICGLLSAFIF 978
Query: 1248 QQRNTSEPSLTPKLSVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEW 1307
Q+R P L P+L+ + ++ TA ++ ++ ++I ++Y + LVEVV+ W
Sbjct: 979 QERAKELPKLKPELAEPAKVIHETANKIAKISKQSGLEIVEKDYI-EQFNLALVEVVFVW 1037
Query: 1308 AKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRD 1367
+ G F+ IC++TD+ EG I+R + R E ++ +A+ I+GN L K E I RD
Sbjct: 1038 SNGASFSSICKMTDIYEGSIIRALRREIELIKQLVDASKIIGNQELVDKFEKCIELINRD 1097
Query: 1368 IVFAASLYI 1376
V +SLY+
Sbjct: 1098 FVQVSSLYM 1106
Score = 40 (19.1 bits), Expect = 4.4e-85, Sum P(3) = 4.4e-85
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K EL F D+
Sbjct: 234 SPIKALSNQKFRELQAIFGDV 254
Score = 39 (18.8 bits), Expect = 1.1e-105, Sum P(3) = 1.1e-105
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 1156 TKENKRHKDE 1165
TK N+RH++E
Sbjct: 734 TKRNRRHQEE 743
>DICTYBASE|DDB_G0275633 [details] [associations]
symbol:DDB_G0275633 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275633 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_643574.1
ProteinModelPortal:Q86IE2 STRING:Q86IE2 EnsemblProtists:DDB0233453
GeneID:8620161 KEGG:ddi:DDB_G0275633 InParanoid:Q86IE2
ProtClustDB:CLSZ2444279 Uniprot:Q86IE2
Length = 1128
Score = 574 (207.1 bits), Expect = 2.2e-139, Sum P(3) = 2.2e-139
Identities = 107/192 (55%), Positives = 141/192 (73%)
Query: 394 ALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIK 453
A +PF+LD FQ +I +E +SV V+AHTSAGKTVVAEY+ A A + R +YT+PIK
Sbjct: 205 ARTYPFKLDPFQATSIACIERNESVLVSAHTSAGKTVVAEYSIATALRDGQRVIYTSPIK 264
Query: 454 TISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFD 512
+SNQK+RD F DVGL+TGD+++ ASCL+MTTEILRSMLYRG++ +R++ WVIFD
Sbjct: 265 ALSNQKFRDLQETFQDVGLMTGDITINANASCLVMTTEILRSMLYRGSETMREVSWVIFD 324
Query: 513 EVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKR 572
E+HY+ D ERGVVWEE II+LP + V LSAT+PN EFA WI + ++ V T R
Sbjct: 325 EIHYLRDKERGVVWEETIILLPDSVKFVFLSATIPNAREFAAWIAKIHKQPCHVVYTEYR 384
Query: 573 PVPLEHCLYYSG 584
P+PL+H ++ SG
Sbjct: 385 PIPLQHYIFPSG 396
Score = 555 (200.4 bits), Expect = 2.2e-139, Sum P(3) = 2.2e-139
Identities = 120/312 (38%), Positives = 189/312 (60%)
Query: 656 SGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSE 715
SG S+ G + + ++ + +++ PV+IF FSK C+ A MS +D + E
Sbjct: 431 SGASRKRGGGNKGPSDCY-KIVKMIMERNYQPVIIFSFSKKECETYALQMSKLDFNNDDE 489
Query: 716 KSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVV 775
K+ + + A L SD+ LP ++ + LL+RGI IHHAGLLPI+KE+IE+LF G +
Sbjct: 490 KNAVETIFNNAIDSLSESDKQLPAVINILPLLKRGIGIHHAGLLPILKEIIEILFQYGYI 549
Query: 776 KVLFSTETFAMGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVV 835
K LF+TETF++G+N PA+TV+F ++RKFDG R + GEY QM+GRAGRRGLD+ G +V
Sbjct: 550 KALFATETFSIGLNMPAKTVIFTSVRKFDGEGMRWISGGEYIQMSGRAGRRGLDERG-IV 608
Query: 836 VLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQ 895
+L DE + K ++ G A RL S F + Y M+L++LRVE++ E++LKRSF ++ +
Sbjct: 609 ILMVDEKMEPAIAKGMVKGQADRLTSSFWIGYSMLLNMLRVEDIDPENLLKRSFHQYQQE 668
Query: 896 KKLPEQQQLLMR--KLAQPPKTIECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH-- 951
+P QL+ + ++ Q K I I+ E ++ EY + + K + + Q +
Sbjct: 669 SFIP---QLVDKCDQMEQEKKEI-IIRDETSVTEYSSIKAQLAKLREAMRDFINQPTYVQ 724
Query: 952 QFLMPGRVLFVK 963
FL GR++ ++
Sbjct: 725 PFLTAGRIVRIR 736
Score = 378 (138.1 bits), Expect = 2.2e-139, Sum P(3) = 2.2e-139
Identities = 94/275 (34%), Positives = 148/275 (53%)
Query: 1111 LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEHMKLTKENKRHKDEVNTLK 1170
+DP++D+K+KD N + K L + ++ C +EE L ++ E+ L+
Sbjct: 857 IDPIEDMKIKDPNFKKLIKKIETLESRFSSTACFNDTDIEERCNLLEKKNEITKEIKQLQ 916
Query: 1171 FQMS--DEALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEELICTECLFEN 1228
Q+ DE + + D + +L +G I D VV +KGRVACE+++G+EL+ +E LF
Sbjct: 917 KQIKSGDEVILK-DDLRSMKRILTRLGYITDDGVVALKGRVACEISAGDELVISELLFAG 975
Query: 1229 QLDDLEPEEAVAIMSAFVFQQRNTSE-----PSLTPKLSVAKERLYNTAIRLGELQAHFK 1283
+DL E+ VA+ S FVFQ ++ P + P L + +TA ++ + K
Sbjct: 976 LFNDLSVEQCVAVFSCFVFQNEGSANNDVNNPKIKPDLVPLYRVIRDTASKVVTVSQECK 1035
Query: 1284 V-QIDPEEY-ARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREF 1341
+ +D + Y A N F ++V + WA G FADI ++TD EG ++R I RLDE R+
Sbjct: 1036 LTSVDEKTYLASFNPNF--MDVTFAWASGASFADIVKMTDTFEGNLIRGIRRLDELIRQM 1093
Query: 1342 RNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
A+ +GN+ L K A+ IKRDI FA SLY+
Sbjct: 1094 VIASKSIGNTELEAKFSEATVKIKRDIPFAGSLYL 1128
Score = 40 (19.1 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 1212 EMNSGEELICTECLFENQLDDLEPEE 1237
+ N+ +E E +F N +D L +
Sbjct: 483 DFNNDDEKNAVETIFNNAIDSLSESD 508
Score = 38 (18.4 bits), Expect = 7.6e-83, Sum P(3) = 7.6e-83
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K +L F D+
Sbjct: 261 SPIKALSNQKFRDLQETFQDV 281
>POMBASE|SPAC17H9.02 [details] [associations]
symbol:SPAC17H9.02 "TRAMP complex ATP-dependent RNA
helicase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0016078 "tRNA catabolic
process" evidence=ISO] [GO:0031499 "TRAMP complex" evidence=ISO]
[GO:0043630 "ncRNA polyadenylation involved in
polyadenylation-dependent ncRNA catabolic process" evidence=ISO]
[GO:0071049 "nuclear retention of pre-mRNA with aberrant 3'-ends at
the site of transcription" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC17H9.02 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GO:GO:0003676 GO:GO:0031499
GO:GO:0043630 GO:GO:0016078 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 PIR:T37868 RefSeq:NP_593572.1
ProteinModelPortal:O13799 STRING:O13799 EnsemblFungi:SPAC17H9.02.1
GeneID:2542173 KEGG:spo:SPAC17H9.02 OMA:FARWISE NextBio:20803244
Uniprot:O13799
Length = 1030
Score = 578 (208.5 bits), Expect = 9.9e-136, Sum P(3) = 9.9e-136
Identities = 114/212 (53%), Positives = 149/212 (70%)
Query: 394 ALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIK 453
A +PFELD FQ AI +E +SV V+AHTSAGKTV+AEYA A A K+ R +YT+PIK
Sbjct: 119 AKTYPFELDPFQSTAIKCVERMESVLVSAHTSAGKTVIAEYAIAQALKNRQRVIYTSPIK 178
Query: 454 TISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFD 512
++SNQKYR+ +F DVGL+TGDVS+ P ASCLIMTTEILR+MLY+ ++I+ +I WVIFD
Sbjct: 179 SLSNQKYRELLSEFGDVGLMTGDVSINPSASCLIMTTEILRAMLYKNSEIMHEIAWVIFD 238
Query: 513 EVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKR 572
EVHY+ D +RGVVWEE +I+LP I + LSAT+PN ++FA WI ++ V T R
Sbjct: 239 EVHYMRDKDRGVVWEETLILLPDAIRFIFLSATLPNALQFARWISEIHKQPCHVVYTDYR 298
Query: 573 PVPLEHCLYYSGE---FYKVCENEAFIPQGWK 601
P PL+H +Y G + V E F + +K
Sbjct: 299 PTPLQHFIYPQGADGIYMLVDEKNKFKTENFK 330
Score = 569 (205.4 bits), Expect = 9.9e-136, Sum P(3) = 9.9e-136
Identities = 126/332 (37%), Positives = 196/332 (59%)
Query: 638 EHPNRGK-QNKHSVVGIKNSGGSQNNWGLRRSEV---SIWLTLINKLSKKSLLPVVIFCF 693
+ N+ K +N V+ + + Q N+ +V S +IN + P+++FCF
Sbjct: 319 DEKNKFKTENFKKVLEVLDHSTRQENYSKSSKKVKKSSSLERIINMVLSNRYDPIIVFCF 378
Query: 694 SKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAI 753
SK C+ A +DL + K + D A ++L DR L Q ++SLL RGI I
Sbjct: 379 SKKECEINAHQFGKLDLNDTENKELVTEIFDSAINQLSEEDRGLRQFEEMRSLLLRGIGI 438
Query: 754 HHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGREFRQLLP 813
HH+GLLPI+KE++E+LF G+V++LF+TETF++G+N PARTV+F +KF G FR L
Sbjct: 439 HHSGLLPILKELVEILFQEGLVRILFATETFSIGLNMPARTVLFTKAQKFSGNNFRWLTS 498
Query: 814 GEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHL 873
GEY QM+GRAGRRG+D G +V+ D+ E + ++ G A L S F L+Y MIL+L
Sbjct: 499 GEYMQMSGRAGRRGIDTKGLSIVIL-DQSIDEQAARCLMNGQADVLNSAFHLSYGMILNL 557
Query: 874 LRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKTIECIKGEPAIEEYYDMYY 933
+R+EE+ ED+LK+SF +F + + LP ++ LM+ L +I I E A++E++D+
Sbjct: 558 MRIEEISPEDILKKSFYQFQNMESLPLIKEELMQ-LKNEETSIN-IPNETAVKEFHDLKL 615
Query: 934 EAEKYNNQITEAFMQSAH--QFLMPGRVLFVK 963
+ EKY +I + + +L GR++ +K
Sbjct: 616 QLEKYGEEIQKVMTHPDNCLPYLQSGRLIQIK 647
Score = 321 (118.1 bits), Expect = 9.9e-136, Sum P(3) = 9.9e-136
Identities = 89/278 (32%), Positives = 147/278 (52%)
Query: 1105 KKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIK--LEEHMKLTKENKRH 1162
K+ P LDP++ + ++ L + K L K+ + + K E H K N R
Sbjct: 759 KEIPY-LDPLEHMHIESSTLSLSLRKLEILEPKLFDSPYYKDSKHRAEYHEFRKKLNLRA 817
Query: 1163 KDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEELICT 1222
+ + + K + EA+ Q+ + + R VL+ +G + V+ IKGRVACE+ SG+EL+
Sbjct: 818 QIKDISTKIT-NTEAIIQLRELKIRQRVLRRLGFCTLENVIDIKGRVACEITSGDELLLV 876
Query: 1223 ECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLYNTAI----RLGEL 1278
E +F+ + + PEE A +S FV++ + SE S T L +++Y T I R+ +
Sbjct: 877 ELIFQGFFNQMPPEEIAAALSCFVYEDK--SEVS-TLNLKEPFKKMYLTIIEAAKRIATV 933
Query: 1279 QAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETC 1338
K+Q + +Y K ++E V W G F +IC ++ + EG IVRT RLDE
Sbjct: 934 SLESKLQFNESDYLHQ-FKPDIMEPVSLWINGASFQEICIVSKLYEGSIVRTFRRLDELL 992
Query: 1339 REFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
++ +AA ++GN+ L +K + RDI+F+ASLY+
Sbjct: 993 KQLEHAAIVLGNNELKEKSVLTEQKLHRDIIFSASLYL 1030
Score = 43 (20.2 bits), Expect = 2.2e-79, Sum P(3) = 2.2e-79
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +KS S++K EL +F D+
Sbjct: 175 SPIKSLSNQKYRELLSEFGDV 195
Score = 42 (19.8 bits), Expect = 2.3e-22, Sum P(3) = 2.3e-22
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 999 SETSLDKKSGDFSEG 1013
SE S D K+ FSEG
Sbjct: 2 SENSTDSKNFQFSEG 16
Score = 40 (19.1 bits), Expect = 4.6e-79, Sum P(3) = 4.6e-79
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 174 LERILPDGASNGEWVQEILKGGPAQVVPPSFK 205
L LP+ W+ EI K P VV ++
Sbjct: 268 LSATLPNALQFARWISEIHKQ-PCHVVYTDYR 298
Score = 39 (18.8 bits), Expect = 2.3e-22, Sum P(3) = 2.3e-22
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 1105 KKYPQALDPVKDLKLKDMNLVEA 1127
K YP LDP + +K + +E+
Sbjct: 120 KTYPFELDPFQSTAIKCVERMES 142
>UNIPROTKB|F5H6Y7 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AL844853 EMBL:AL662849 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00946735
SMR:F5H6Y7 Ensembl:ENST00000547025 Ensembl:ENST00000547224
Ensembl:ENST00000547296 Ensembl:ENST00000548561
Ensembl:ENST00000552010 Uniprot:F5H6Y7
Length = 880
Score = 1288 (458.5 bits), Expect = 2.4e-131, P = 2.4e-131
Identities = 299/714 (41%), Positives = 434/714 (60%)
Query: 672 IWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLK 731
++L+L+ L ++ LPVV+F FS+ CD+ A G++ +DLT+SSEKSEI +F + +RL+
Sbjct: 187 VYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLR 246
Query: 732 GSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAP 791
GSDR LPQ++ + LL RG+ +HH+G+LPI+KE++EMLF RG+VKVLF+TETFAMGVN P
Sbjct: 247 GSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMP 306
Query: 792 ARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHI 851
ARTVVFD++RK DG FR LLPGEY QMAGRAGRRGLD GTV++LC+ +P +DL +
Sbjct: 307 ARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRM 366
Query: 852 IVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQK--KLPEQQ--QLLMR 907
++G ++L+SQFRLTY MIL+LLRV+ L+VEDM+KRSF+EF S+K K EQ +L R
Sbjct: 367 MMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAELTKR 426
Query: 908 --KLAQPPKTIECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVK 963
L +P T + + + EYY E + + I M+S + + L GRV+ VK
Sbjct: 427 LGALEEPDMTGQLVD----LPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVVVK 482
Query: 964 SQTGQDHLLGAVVKAPSANNKEYIVMLLKPDLPSASETSLDKKSGDFSEGYFVIPKSKRG 1023
+Q + LG +++ S + L+ D P S+ D+ Y P G
Sbjct: 483 NQE-HHNALGVILQVSSNSTSRVFTTLVLCDKP-LSQDPQDRGPATAEVPY---PDDLVG 537
Query: 1024 LEEEYC-GSVSHRKGSGVINIKLPYHGAAAGVSYEVRGIDKKELLCICNCKIKIDQVGLL 1082
+ G H V+ ++ P G A ++ +V ++ +++L + K Q
Sbjct: 538 FKLFLPEGPCDHT----VVKLQ-P--GDMAAITTKVLRVNGEKILEDFS---KRQQPKFK 587
Query: 1083 EDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAANK 1142
+D AA + VQ+LL L P LDPV DL+LKDM++VE + L + +
Sbjct: 588 KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQ 647
Query: 1143 C-HGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADL 1201
C H +++KL +E + + E+ L+F +SD++L +P++ R++VL+ +G +D
Sbjct: 648 CVHSPRFPAQYLKL-RERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAG 706
Query: 1202 VVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKL 1261
V++ GRVAC M+S EL+ TE +F+N L L PEE A++S V Q + L L
Sbjct: 707 TVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTL 765
Query: 1262 SVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTD 1321
ER+ A R+GE+Q + EE+ + L FGLVEVVYEWA+G PF+++ L+
Sbjct: 766 KQGIERVRAVAKRIGEVQVACGLNQTVEEFVGE-LNFGLVEVVYEWARGMPFSELAGLSG 824
Query: 1322 VPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLY 1375
PEGL+VR I RL E CR R AA ++G L KMETA+ ++RDIVFAASLY
Sbjct: 825 TPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 878
>UNIPROTKB|F1MJX4 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:DAAA02050346 EMBL:DAAA02050343 EMBL:DAAA02050344
EMBL:DAAA02050345 IPI:IPI00839454 Ensembl:ENSBTAT00000047363
Uniprot:F1MJX4
Length = 937
Score = 597 (215.2 bits), Expect = 8.4e-130, Sum P(3) = 8.4e-130
Identities = 130/310 (41%), Positives = 185/310 (59%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
++ + +++ PV+IF FSK C+ A M+ +D + EK + A L D+
Sbjct: 375 IVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDK 434
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
LPQ+ V LL+RGI IHH GLLPI+KE IE+LF G++K LF+TETFAMG+N PARTV
Sbjct: 435 KLPQVENVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTV 494
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS 855
+F N RKFDG++FR + GEY QM+GRAGRRG+D G +V+L DE + K ++ GS
Sbjct: 495 LFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRG-IVILMVDEKMSPTIGKQLLKGS 553
Query: 856 ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKT 915
A L S F LTY M+L+LLRVEE+ E ML++SF +F + +P + + Q K
Sbjct: 554 ADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKI 613
Query: 916 IECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVKSQTGQDHLLG 973
+ I E ++ YY + + K +I E + + FL PGR++ VK++ G D G
Sbjct: 614 V--IPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNE-GDDFGWG 670
Query: 974 AVVKAPSANN 983
VV +N
Sbjct: 671 VVVNFSKKSN 680
Score = 593 (213.8 bits), Expect = 8.4e-130, Sum P(3) = 8.4e-130
Identities = 128/269 (47%), Positives = 175/269 (65%)
Query: 331 TTVGFNSVKEADLSVLDE-ILSVKSGGTTSILDDGG------GQQQKEAWVVSGSTEAIA 383
T VG N ++AD DE I K SI +D + + V G T +A
Sbjct: 55 TNVGKNK-RDADFEGADEPIFGKKPRVEESITEDLSLADLMPRVKVQSVETVEGCTHEVA 113
Query: 384 ----DRFHELVPDL---ALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAF 436
+ + L P + A ++PF LD FQ+EAI ++N SV V+AHTSAGKTV AEYA
Sbjct: 114 LPADEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAI 173
Query: 437 ALATKHCTRAVYTAPIKTISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSM 495
ALA + R ++T+PIK +SNQKYR+ +F DVGL+TGDV++ P ASCL+MTTEILRSM
Sbjct: 174 ALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSM 233
Query: 496 LYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADW 555
LYRG++++R++ WVIFDE+HY+ D ERGVVWEE II+LP +++ V LSAT+PN +FA+W
Sbjct: 234 LYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEW 293
Query: 556 IGRTKQKKIRVTGTTKRPVPLEHCLYYSG 584
I ++ V T RP PL+H ++ +G
Sbjct: 294 ICHLHKQPCHVIYTDYRPTPLQHYIFPAG 322
Score = 213 (80.0 bits), Expect = 8.4e-130, Sum P(3) = 8.4e-130
Identities = 53/174 (30%), Positives = 95/174 (54%)
Query: 1099 VLKSDE---KKYPQA---LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEH 1152
VLKS + K++P LDP+ D+ ++D L + K +M ++ H LE
Sbjct: 757 VLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETV 816
Query: 1153 MKLTKENKRHKDEVNTLKFQMSD-EALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVAC 1211
L ++ + ++ + K ++ + QM + + R VL+ +G + V+++KGRVAC
Sbjct: 817 YTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVAC 876
Query: 1212 EMN---SGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLS 1262
E++ S +EL+ TE +F +DL E+A A++S FVFQ+ ++ P LT +L+
Sbjct: 877 EISRWYSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLA 930
Score = 40 (19.1 bits), Expect = 2.2e-53, Sum P(2) = 2.2e-53
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1212 EMNSGEELICTECLFENQLDDLEPEE 1237
+ N+ EE E +F N +D L E+
Sbjct: 408 DFNTDEEKKMVEEVFSNAIDCLSDED 433
Score = 39 (18.8 bits), Expect = 1.4e-71, Sum P(3) = 1.4e-71
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K E+ +F D+
Sbjct: 187 SPIKALSNQKYREMYEEFQDV 207
Score = 37 (18.1 bits), Expect = 4.4e-53, Sum P(2) = 4.4e-53
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 587 YKVCENEAFIPQGWKAAKDAYKR 609
Y +CE +A I K+AK K+
Sbjct: 817 YTLCEKKAQIAIDIKSAKRELKK 839
>UNIPROTKB|F1MAH7 [details] [associations]
symbol:F1MAH7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 IPI:IPI00372914 PRIDE:F1MAH7
Ensembl:ENSRNOT00000013683 ArrayExpress:F1MAH7 Uniprot:F1MAH7
Length = 1046
Score = 561 (202.5 bits), Expect = 1.7e-129, Sum P(3) = 1.7e-129
Identities = 120/268 (44%), Positives = 167/268 (62%)
Query: 318 LEPESIDSDAEGKTTVGFNSVKEADLSVLDEILSVKSGGTTSILDDGGGQQQKEAWVVSG 377
L+ E D GK +S+ E DLS+ D + VK ++ G + +W +
Sbjct: 66 LDVEGTDEPIFGKKPRIEDSINE-DLSLADLMPRVKVQSVETV----EGCTHEVSWPQTH 120
Query: 378 STEAIADRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFA 437
+ +P FPF F +E + L SV V+AHTSAGKTV AEYA A
Sbjct: 121 RYPPASPACGTKLPS----FPFSYSIFYREMVECLTINQSVLVSAHTSAGKTVCAEYAIA 176
Query: 438 LATKHCTRAVYTAPIKTISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSML 496
LA + R ++T+PIK +SNQKYR+ +F DVGL+TGDV++ P ASCL+MTTEILRSML
Sbjct: 177 LALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSML 236
Query: 497 YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWI 556
YRG++++R++ WVIFDE+HY+ D ERGVVWEE II+LP +++ V LSAT+PN +FA+WI
Sbjct: 237 YRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWI 296
Query: 557 GRTKQKKIRVTGTTKRPVPLEHCLYYSG 584
++ V T RP PL+H ++ +G
Sbjct: 297 CHLHKQPCHVIYTDYRPTPLQHYIFPAG 324
Score = 469 (170.2 bits), Expect = 1.7e-129, Sum P(3) = 1.7e-129
Identities = 94/218 (43%), Positives = 137/218 (62%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
++ + +++ PV+IF FSK C+ A M+ +D + EK + + A L D+
Sbjct: 377 IVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDK 436
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
LPQ+ V LL+RGI IHH GLLPI+KE IE+LF G++K LF+TETFAMG+N PARTV
Sbjct: 437 KLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTV 496
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIV-G 854
+F N RK+DG++FR + GEY QM+GRAGRRG+D G +V+L DE + K ++ G
Sbjct: 497 LFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMDDRG-IVILMVDEKMSPTIGKQLLKKG 555
Query: 855 SATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEF 892
+L + F L Y+ +L L + E+ E + + F +F
Sbjct: 556 QGDKLSAAFYLVYVHLLGALFLNEIDKEHLHLKPFTQF 593
Score = 381 (139.2 bits), Expect = 1.7e-129, Sum P(3) = 1.7e-129
Identities = 98/287 (34%), Positives = 158/287 (55%)
Query: 1099 VLKSDE---KKYPQA---LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEH 1152
VLKS + K++P LDP+ D+ ++D L + K +M ++ H LE
Sbjct: 762 VLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETV 821
Query: 1153 MKLTKENKRHKDEVNTLKFQMSD-EALQQMPDFQGRIDVLKE-IGCIDADLVVQIKGRVA 1210
L ++ + ++ + K ++ + QM + + R ++ I I +D Q+K RV+
Sbjct: 822 YTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKPCTRKLIFKITSD-EKQLKHRVS 880
Query: 1211 CEMNSG-EELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLY 1269
++S +EL+ TE +F +DL E+A A++S FVFQ+ ++ P LT +L+ ++
Sbjct: 881 LTVHSSADELLLTEMMFNGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQ 940
Query: 1270 NTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVR 1329
A R+ ++ A K++ID E Y + K L++VVY WA G FA IC++TDV EG I+R
Sbjct: 941 ECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIR 999
Query: 1330 TIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
+ RL+E R+ AA +GN+ L K IKRDIVFAASLY+
Sbjct: 1000 CMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1046
Score = 43 (20.2 bits), Expect = 1.2e-48, Sum P(3) = 1.2e-48
Identities = 21/101 (20%), Positives = 41/101 (40%)
Query: 822 RAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLLRVEELKV 881
++ +R L K TV+ + DE+ ++ T E Q + + +H E L
Sbjct: 836 KSAKRELKKARTVLQM--DELKCRKPCTRKLIFKITSDEKQLKHRVSLTVHSSADELLLT 893
Query: 882 EDMLKRSFAEFHSQKKLPEQQQLLMRK-LAQPPKTIECIKG 921
E M F + S++ + ++ ++ PK E + G
Sbjct: 894 EMMFNGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQLAG 934
Score = 41 (19.5 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 27/104 (25%), Positives = 43/104 (41%)
Query: 115 RRQTKQGKWEPNS--VD---VSELMLG-AQDS--GPLPRVAGPAKDFVRGSINSRPFRPG 166
R + K K+ PNS +D V E++L +++S A PAK +G + P
Sbjct: 678 RGERKWSKYSPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVH 737
Query: 167 GLEDSQSLERILPDGASNGEWVQEILKGGPAQVVPPSFKQGLDL 210
L ++ +P + Q +LK Q V F G+ L
Sbjct: 738 LLSAISTVRLYIPKDLRPVDNRQSVLKS--IQEVQKRFPDGVPL 779
Score = 40 (19.1 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1212 EMNSGEELICTECLFENQLDDLEPEE 1237
+ N+ EE E +F N +D L E+
Sbjct: 410 DFNTDEEKKMVEEVFNNAIDCLSDED 435
Score = 39 (18.8 bits), Expect = 6.7e-74, Sum P(3) = 6.7e-74
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K E+ +F D+
Sbjct: 189 SPIKALSNQKYREMYEEFQDV 209
Score = 37 (18.1 bits), Expect = 1.2e-48, Sum P(3) = 1.2e-48
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 587 YKVCENEAFIPQGWKAAKDAYKR 609
Y +CE +A I K+AK K+
Sbjct: 822 YTLCEKKAQIAIDIKSAKRELKK 844
Score = 37 (18.1 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 912 PPKTIECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH 951
PP + C P+ Y ++Y I ++ + SAH
Sbjct: 123 PPASPACGTKLPSFPFSYSIFYREMVECLTINQSVLVSAH 162
>UNIPROTKB|F1N993 [details] [associations]
symbol:F1N993 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000178 "exosome (RNase
complex)" evidence=IEA] [GO:0000460 "maturation of 5.8S rRNA"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 GO:GO:0000178 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000460
GO:GO:0008026 GeneTree:ENSGT00690000102230 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 EMBL:AADN02054537 EMBL:AADN02054530
EMBL:AADN02054531 EMBL:AADN02054532 EMBL:AADN02054533
EMBL:AADN02054534 EMBL:AADN02054535 EMBL:AADN02054536
IPI:IPI00599020 Ensembl:ENSGALT00000023719 Uniprot:F1N993
Length = 1031
Score = 576 (207.8 bits), Expect = 2.5e-122, Sum P(3) = 2.5e-122
Identities = 127/310 (40%), Positives = 184/310 (59%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
++ + +++ PV+IF FSK C+ A M+ +D + EK + + A L D+
Sbjct: 366 IVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDK 425
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
LPQ+ V LL+RGI IHH GLLPI+KE IE+LF G++K LF+TETFAMG+N PARTV
Sbjct: 426 KLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTV 485
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS 855
+F + KFDG++FR + GEY QM+GRAGRRG+D G +V+L DE + K ++ GS
Sbjct: 486 LFTSASKFDGKDFRWISSGEYIQMSGRAGRRGMDDRG-IVILMVDEKMSPTIGKQLLKGS 544
Query: 856 ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKT 915
A L S F LTY M+L+LLRVEE+ E ML++SF +F + +P + + + Q K
Sbjct: 545 ADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVNKLEEQYNKI 604
Query: 916 IECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVKSQTGQDHLLG 973
+ I E + YY + + K +I E + + FL PGR++ VK++ D G
Sbjct: 605 V--IPNEENVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNED-DDFGWG 661
Query: 974 AVVKAPSANN 983
VV +N
Sbjct: 662 VVVNFSKKSN 671
Score = 406 (148.0 bits), Expect = 2.5e-122, Sum P(3) = 2.5e-122
Identities = 95/285 (33%), Positives = 154/285 (54%)
Query: 1099 VLKSDE---KKYPQA---LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEH 1152
VLKS + K++P LDP+ D+ +KD L + K +M ++ H LE
Sbjct: 748 VLKSIQEVQKRFPDGVPLLDPIDDMGIKDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETI 807
Query: 1153 MKLTKENKRHKDEVNTLKFQMSD-EALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVAC 1211
KL + + ++ K ++ + QM + + R VL+ +G + V+++KGRVAC
Sbjct: 808 YKLCERKAQIAMDIKAAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVAC 867
Query: 1212 EMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLYNT 1271
E++S +EL+ TE +F +DL E+A A++S FVFQ+ + P LT +L+ ++
Sbjct: 868 EISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSNEMPKLTEQLAGPLRQMQEC 927
Query: 1272 AIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTI 1331
A R+ + A K++ID E Y ++ + L++VVY WA G FA IC++TDV EG I+R +
Sbjct: 928 AKRIARVSAEAKLEIDEENYL-NSFRPNLMDVVYTWANGASFAHICKMTDVFEGSIIRCM 986
Query: 1332 VRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
RL+E R+ AA +GN+ L K R + F + L I
Sbjct: 987 RRLEELLRQMCQAAKAIGNTELENKFAEGRTYKSRPVSFHSGLQI 1031
Score = 359 (131.4 bits), Expect = 2.5e-122, Sum P(3) = 2.5e-122
Identities = 71/168 (42%), Positives = 113/168 (67%)
Query: 419 FVAAHTSAGKTV-VAEYAFALATKHCTRAVYTAPIKTISNQKYRDFSGKF-DVGLLTGDV 476
++ A +G T+ + +YA ALA + R ++T+PIK +SNQKYR+ +F DVGL+TGDV
Sbjct: 146 YMFARIWSGSTITLLKYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDV 205
Query: 477 SLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRH 536
++ P ASCL+MTTEILRSMLYRG++++R++ WVIFDE+HY+ D E+G + I+ +P +
Sbjct: 206 TINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSEKGNFEDIFIVAIPGN 265
Query: 537 INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSG 584
+++ + FA+ I + ++ V T RP PL+H ++ +G
Sbjct: 266 TLYIIMELSYYLGDGFAEKIIFSIKQPCHVIYTDYRPTPLQHYIFPAG 313
Score = 49 (22.3 bits), Expect = 3.6e-28, Sum P(2) = 3.6e-28
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 587 YKVCENEAFIPQGWKAAKDAYKR 609
YK+CE +A I KAAK K+
Sbjct: 808 YKLCERKAQIAMDIKAAKRELKK 830
Score = 40 (19.1 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1212 EMNSGEELICTECLFENQLDDLEPEE 1237
+ N+ EE E +F N +D L E+
Sbjct: 399 DFNTDEEKKMVEEVFNNAIDCLSDED 424
Score = 39 (18.8 bits), Expect = 1.1e-88, Sum P(3) = 1.1e-88
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K E+ +F D+
Sbjct: 178 SPIKALSNQKYREMYEEFQDV 198
>GENEDB_PFALCIPARUM|PFF0100w [details] [associations]
symbol:PFF0100w "putative ATP dependent RNA
helicase" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL844505 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_966011.1
ProteinModelPortal:C6KSM1 EnsemblProtists:PFF0100w:mRNA
GeneID:3885738 KEGG:pfa:PFF0100w EuPathDB:PlasmoDB:PF3D7_0602100
OMA:RGIVIIM ProtClustDB:CLSZ2433467 Uniprot:C6KSM1
Length = 1350
Score = 601 (216.6 bits), Expect = 3.3e-121, Sum P(3) = 3.3e-121
Identities = 115/226 (50%), Positives = 159/226 (70%)
Query: 389 LVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVY 448
L+P A + FELD FQK++I LE +SV V+AHTSAGKTV+AEYA AL + R +Y
Sbjct: 245 LIP--ARTYKFELDTFQKKSIECLERNESVLVSAHTSAGKTVIAEYAIALGLRDKQRVIY 302
Query: 449 TAPIKTISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIE 507
T+PIK +SNQKYRD +F DVGL+TGD+S+ PEAS ++MTTEILRSMLYRG+ + ++++
Sbjct: 303 TSPIKALSNQKYRDLGEEFKDVGLITGDISINPEASIIVMTTEILRSMLYRGSSLTKEVK 362
Query: 508 WVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVT 567
WVIFDE+HY+ D +RGV+WEE II+LP + + LSAT+PN ++FA+W+ K + +
Sbjct: 363 WVIFDEIHYMRDRDRGVIWEETIILLPLMVRFIFLSATIPNGIQFAEWVSSIKSQACHIV 422
Query: 568 GTTKRPVPLEHCLY-YSGE-FYKVC-ENEAFIPQGWKAAKDAYKRK 610
T RP PL+H +Y S E + +C EN+ F + A + K K
Sbjct: 423 YTDYRPTPLQHYIYPTSSESVFLICDENKDFKKDNFIKAVNVIKEK 468
Score = 535 (193.4 bits), Expect = 3.3e-121, Sum P(3) = 3.3e-121
Identities = 114/241 (47%), Positives = 155/241 (64%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
++ ++ P++IF FSK C+ A M IDLTS +EK I+ + A L DR
Sbjct: 498 IVQMCHSRNYTPLIIFAFSKKECEVNATAMHKIDLTSDTEKEVIKELYENAIRILADDDR 557
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
+LPQ+ + LL RGI IHH GLLPI+KE+IE++F ++KVLFSTETF+MG+N PA+TV
Sbjct: 558 SLPQVQFILPLLLRGIGIHHGGLLPIIKEIIEIMFQESLLKVLFSTETFSMGINMPAKTV 617
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS 855
VF +L KFDG E R + GEY QMAGRAGRRGLD G V+++ + K + VG
Sbjct: 618 VFTSLTKFDGLEKRLITSGEYIQMAGRAGRRGLDDRGIVIIMLDTPLHWREAHK-LFVGE 676
Query: 856 ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKT 915
A RL SQF L Y MIL+LLR+E + E M++RSF ++ +K L Q+ L +K+ + K
Sbjct: 677 ANRLVSQFHLGYNMILNLLRIEGITPEFMIERSFIQYQMKKNL-SQKILAKKKVEEHIKQ 735
Query: 916 I 916
I
Sbjct: 736 I 736
Score = 203 (76.5 bits), Expect = 3.3e-121, Sum P(3) = 3.3e-121
Identities = 49/180 (27%), Positives = 93/180 (51%)
Query: 1198 DADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSL 1257
+ + VV +KG++A + S +EL+ +E F N + A +S FV+ + + E ++
Sbjct: 1172 EKNYVVTMKGQIASAILSVDELVISELFFSNFFSKYNYDYICAFLSCFVYDESTSKEITI 1231
Query: 1258 T-PKLSVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADI 1316
P L +++ TA + + I+ ++Y D K ++ + WA+G F +I
Sbjct: 1232 NDPILVEGYQQIIKTANHVATKMNECGMNINLKDYI-DKFKSAIMPIALLWARGHSFVEI 1290
Query: 1317 CELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
+ + EG I+RT+ RLDE R+ A + N ++ + + A+N ++R I F+ SLY+
Sbjct: 1291 LSDSQIYEGSIIRTLRRLDELIRQMICAFRGINNDSMCETLTLATNKLRRGIPFSPSLYL 1350
Score = 39 (18.8 bits), Expect = 8.6e-62, Sum P(3) = 8.6e-62
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K +L +F D+
Sbjct: 304 SPIKALSNQKYRDLGEEFKDV 324
Score = 39 (18.8 bits), Expect = 8.6e-62, Sum P(3) = 8.6e-62
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 174 LERILPDGASNGEWVQEILKGGPAQVVPPSFK 205
L +P+G EWV I K +V ++
Sbjct: 397 LSATIPNGIQFAEWVSSI-KSQACHIVYTDYR 427
Score = 37 (18.1 bits), Expect = 6.9e-69, Sum P(3) = 6.9e-69
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 635 QKREHPNRGKQNKHSVVGIKNSGGSQNNWGLRRSE 669
QK +H N N + N G NN +SE
Sbjct: 906 QKNKHNNSNNNNNN------NHSGDHNNLKQAKSE 934
>UNIPROTKB|G3MYJ7 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 EMBL:DAAA02050346 EMBL:DAAA02050343
EMBL:DAAA02050344 EMBL:DAAA02050345 Ensembl:ENSBTAT00000064767
Uniprot:G3MYJ7
Length = 605
Score = 593 (213.8 bits), Expect = 1.2e-110, Sum P(2) = 1.2e-110
Identities = 128/269 (47%), Positives = 175/269 (65%)
Query: 331 TTVGFNSVKEADLSVLDE-ILSVKSGGTTSILDDGG------GQQQKEAWVVSGSTEAIA 383
T VG N ++AD DE I K SI +D + + V G T +A
Sbjct: 55 TNVGKNK-RDADFEGADEPIFGKKPRVEESITEDLSLADLMPRVKVQSVETVEGCTHEVA 113
Query: 384 ----DRFHELVPDL---ALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAF 436
+ + L P + A ++PF LD FQ+EAI ++N SV V+AHTSAGKTV AEYA
Sbjct: 114 LPADEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAI 173
Query: 437 ALATKHCTRAVYTAPIKTISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSM 495
ALA + R ++T+PIK +SNQKYR+ +F DVGL+TGDV++ P ASCL+MTTEILRSM
Sbjct: 174 ALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSM 233
Query: 496 LYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADW 555
LYRG++++R++ WVIFDE+HY+ D ERGVVWEE II+LP +++ V LSAT+PN +FA+W
Sbjct: 234 LYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEW 293
Query: 556 IGRTKQKKIRVTGTTKRPVPLEHCLYYSG 584
I ++ V T RP PL+H ++ +G
Sbjct: 294 ICHLHKQPCHVIYTDYRPTPLQHYIFPAG 322
Score = 543 (196.2 bits), Expect = 1.2e-110, Sum P(2) = 1.2e-110
Identities = 108/224 (48%), Positives = 148/224 (66%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
++ + +++ PV+IF FSK C+ A M+ +D + EK + A L D+
Sbjct: 375 IVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDK 434
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
LPQ+ V LL+RGI IHH GLLPI+KE IE+LF G++K LF+TETFAMG+N PARTV
Sbjct: 435 KLPQVENVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTV 494
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS 855
+F N RKFDG++FR + GEY QM+GRAGRRG+D G +V+L DE + K ++ GS
Sbjct: 495 LFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRG-IVILMVDEKMSPTIGKQLLKGS 553
Query: 856 ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLP 899
A L S F LTY M+L+LLRVEE+ E ML++SF +F + +P
Sbjct: 554 ADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIP 597
Score = 40 (19.1 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1212 EMNSGEELICTECLFENQLDDLEPEE 1237
+ N+ EE E +F N +D L E+
Sbjct: 408 DFNTDEEKKMVEEVFSNAIDCLSDED 433
Score = 39 (18.8 bits), Expect = 3.8e-52, Sum P(2) = 3.8e-52
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K E+ +F D+
Sbjct: 187 SPIKALSNQKYREMYEEFQDV 207
>POMBASE|SPAC6F12.16c [details] [associations]
symbol:mtr4 "ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0016078 "tRNA catabolic process" evidence=ISO]
[GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630 "ncRNA
polyadenylation involved in polyadenylation-dependent ncRNA
catabolic process" evidence=ISO] [GO:0071049 "nuclear retention of
pre-mRNA with aberrant 3'-ends at the site of transcription"
evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
PomBase:SPAC6F12.16c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GO:GO:0003676 GO:GO:0031499 GO:GO:0043630 GO:GO:0016078
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696
Pfam:PF13234 EMBL:AB027847 PIR:T11667 RefSeq:NP_593302.1
ProteinModelPortal:O14232 STRING:O14232 EnsemblFungi:SPAC6F12.16c.1
GeneID:2541639 KEGG:spo:SPAC6F12.16c OMA:DDRISAD OrthoDB:EOG4S1XG7
NextBio:20802732 GO:GO:0071049 Uniprot:O14232
Length = 1117
Score = 586 (211.3 bits), Expect = 3.1e-109, Sum P(2) = 3.1e-109
Identities = 124/291 (42%), Positives = 180/291 (61%)
Query: 324 DSDAEGKTTVGFNSVKEADLSVLDEILSVKSGGTTSILDDGGGQQQKEAWVVSGSTEAIA 383
+ D + TV + +EA L V ++ ++ +T + + Q + + +
Sbjct: 123 EGDTIPEATVADSFEQEASLQVAGKVGMTEAKSSTEEVVELRHQVRHQVSIPPNYDYVPI 182
Query: 384 DRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHC 443
+ +P A +PF LD FQ +I +E +SV V+AHTSAGKTVVAEYA A + +
Sbjct: 183 SKHKSPIPP-ARTYPFTLDPFQAVSIACIERQESVLVSAHTSAGKTVVAEYAVAQSLRDK 241
Query: 444 TRAVYTAPIKTISNQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADI 502
R +YT+PIK +SNQKYR+ +F DVGL+TGDV++ P+A+CL+MTTEILRSMLYRG+++
Sbjct: 242 QRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDVTINPDATCLVMTTEILRSMLYRGSEV 301
Query: 503 IRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQK 562
+R++ WVIFDE+HY+ D ERGVVWEE II+LP + V LSAT+PN ++FA+WI + ++
Sbjct: 302 MREVAWVIFDEIHYMRDKERGVVWEETIILLPDKSHFVFLSATIPNAMQFAEWITKIHRQ 361
Query: 563 KIRVTGTTKRPVPLEHCLYYSGE---FYKVCENEAFIPQGWKAAKDAYKRK 610
V T RP PL+H L+ SG V E F + ++ A A K
Sbjct: 362 PCHVVYTDFRPTPLQHYLFPSGSDGIHLVVDEKSNFREENFQRAMSALMEK 412
Score = 584 (210.6 bits), Expect = 3.1e-109, Sum P(2) = 3.1e-109
Identities = 174/516 (33%), Positives = 267/516 (51%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
++ + K+ PV++F FSK C+ LA MS +D+ +E+ + + A ++L DR
Sbjct: 445 IVKMIMVKNYNPVIVFSFSKRECEALALQMSKLDMNDQTERDLVTTIFNNAVNQLSEKDR 504
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
LPQI + LLRRGI IHH+GLLPI+KEVIE+LF G++KVLF+TETF++G+N PA+TV
Sbjct: 505 ELPQIEHILPLLRRGIGIHHSGLLPILKEVIEILFQEGLLKVLFATETFSIGLNMPAKTV 564
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS 855
VF N+RKFDG+ FR + GEY QM+GRAGRRGLD G +V+L DE K ++ G
Sbjct: 565 VFTNVRKFDGKTFRWISGGEYIQMSGRAGRRGLDDRG-IVILMIDEKMDPPVAKSMLKGE 623
Query: 856 ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKT 915
A RL+S F L+Y MIL+LLRVE + E ML+R F +F + ++P+ + L +Q
Sbjct: 624 ADRLDSAFHLSYNMILNLLRVEGISPEFMLERCFFQFQNSLEVPKLEAKLEE--SQQHYD 681
Query: 916 IECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAH--QFLMPGRVLFVKSQTGQDHLLG 973
I E +EEY+ + + E+Y + FL GR++ VK +D G
Sbjct: 682 SFTILDERPLEEYHTLKTQLERYRTDVRTVVNHPNFCLSFLQGGRLVRVKVGN-EDFDWG 740
Query: 974 AVVKA-----PSANNKEYIVM---LLKPDLPSASETS-LDKKSGDFSEGYFVIPKSKRGL 1024
VV P + EY+ ++ + AS+T L +SG E + + K G
Sbjct: 741 VVVNVSKRPLPKGQSNEYLPQESYIVHTLVMVASDTGPLRIRSGHLPEVHPPAAEDK-GK 799
Query: 1025 EEEYCGSVSHRKGSGVINIKLPYHGAAAGVSYEV-RGIDKKELLCICNCKIKIDQVGLLE 1083
E +S G I + LP + G V + + + + + +D V +
Sbjct: 800 FEVVPFLLSSLDGIAHIRVFLPNDLKSQGQKLTVGKALSEVKRRFPEGITL-LDPVENM- 857
Query: 1084 DVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKC 1143
++ F K ++++ +L+S P L +L+ K Y + LL ++ K
Sbjct: 858 NIKEPTFIKLMKKVNILESRLLSNP--LHNFSELEEK----YAEYLRKLALLEEVKDLK- 910
Query: 1144 HGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQ 1179
K M+L + N R K + L F SD+ ++
Sbjct: 911 KKLSKARSIMQLDELNSR-KRVLRRLGFTTSDDVIE 945
Score = 448 (162.8 bits), Expect = 7.1e-95, Sum P(2) = 7.1e-95
Identities = 104/304 (34%), Positives = 175/304 (57%)
Query: 1078 QVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQA---LDPVKDLKLKDMNLVEAYYKWAGL 1134
+V L D+ S TV + L ++++P+ LDPV+++ +K+ ++ K L
Sbjct: 817 RVFLPNDLKSQGQKLTVGK--ALSEVKRRFPEGITLLDPVENMNIKEPTFIKLMKKVNIL 874
Query: 1135 LRKMAANKCHGCIKLEEHMKLTKENKRHKDEVNTLKFQMSD-EALQQMPDFQGRIDVLKE 1193
++ +N H +LEE +EV LK ++S ++ Q+ + R VL+
Sbjct: 875 ESRLLSNPLHNFSELEEKYAEYLRKLALLEEVKDLKKKLSKARSIMQLDELNSRKRVLRR 934
Query: 1194 IGCIDADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTS 1253
+G +D V+++KGRVACE++SG+ L+ TE +F +DL PE+ A++S VFQ+++
Sbjct: 935 LGFTTSDDVIEVKGRVACEISSGDGLLLTELIFNGMFNDLTPEQCAALLSCLVFQEKSEV 994
Query: 1254 EPS-LTPKLSVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTP 1312
E + +L+ + L A R+ ++ K +++ EEY ++ K L+EVVY WA G
Sbjct: 995 ENQRMKEELAGPLKILQEMARRIAKVSKESKQELNEEEYV-NSFKPSLMEVVYAWAHGAS 1053
Query: 1313 FADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAA 1372
FA IC++TDV EG ++R RL+E R+ +AA ++GN++L +KME I RDIVF+A
Sbjct: 1054 FAQICKMTDVYEGSLIRMFRRLEELIRQMVDAAKVIGNTSLQQKMEDTIACIHRDIVFSA 1113
Query: 1373 SLYI 1376
SLY+
Sbjct: 1114 SLYL 1117
Score = 42 (19.8 bits), Expect = 7.2e-52, Sum P(2) = 7.2e-52
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K EL +F D+
Sbjct: 248 SPIKALSNQKYRELLAEFGDV 268
>ASPGD|ASPL0000070749 [details] [associations]
symbol:mtr4 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0031499 "TRAMP
complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:BN001303
GO:GO:0031499 GO:GO:0043629 GO:GO:0071035 GO:GO:0071038
EMBL:AACD01000076 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000467 GO:GO:0071042 GO:GO:0071051 GO:GO:0008143
GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475 GO:GO:0034476
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 OrthoDB:EOG4S1XG7 GO:GO:0071049 RefSeq:XP_662016.1
ProteinModelPortal:Q5B4W8 STRING:Q5B4W8
EnsemblFungi:CADANIAT00006045 GeneID:2872204 KEGG:ani:AN4412.2
Uniprot:Q5B4W8
Length = 1073
Score = 586 (211.3 bits), Expect = 1.1e-107, Sum P(2) = 1.1e-107
Identities = 106/189 (56%), Positives = 145/189 (76%)
Query: 397 FPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTIS 456
+PF LD FQ+ A+ ++ G+SV V+AHTSAGKTVVAEYA A + K+ R +YT+PIK +S
Sbjct: 149 WPFTLDPFQQVAVSSIQRGESVLVSAHTSAGKTVVAEYAIAQSLKNNQRVIYTSPIKALS 208
Query: 457 NQKYRDFSGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVH 515
NQKYR+F+ +F DVGL+TGDV++ P A+CL+MTTEILRSMLYRG++I+R++ WV+FDE+H
Sbjct: 209 NQKYREFAAEFGDVGLMTGDVTINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIH 268
Query: 516 YVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVP 575
Y+ D RGVVWEE II+LP + V LSAT+PN ++FA+WI + + V T RP P
Sbjct: 269 YMRDATRGVVWEETIILLPDKVRYVFLSATIPNAMQFAEWITKMHNQPCHVVYTDFRPTP 328
Query: 576 LEHCLYYSG 584
L+H + +G
Sbjct: 329 LQHYFFPAG 337
Score = 568 (205.0 bits), Expect = 1.1e-107, Sum P(2) = 1.1e-107
Identities = 168/489 (34%), Positives = 257/489 (52%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
++ + KSL PV++F FSK C+ A M + SEK + + A L DR
Sbjct: 401 IVKMIMLKSLNPVIVFSFSKRECEFYALKMKSLAFNDDSEKEMVSKVFNSAIEMLSEEDR 460
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
NLPQI + LLRRGI +HH+GLLPI+KE IE+LF G++KVLF+TETF++G+N PA+TV
Sbjct: 461 NLPQIQNILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTV 520
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS 855
VF ++RKFDG R + P E+ QM+GRAGRRGLD G V+++ +E+ + K I+ G
Sbjct: 521 VFTSVRKFDGFSQRWVTPSEFVQMSGRAGRRGLDDRGIVIMMIGEEMD-PAVAKEIVRGE 579
Query: 856 ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKT 915
RL S F L Y MIL+L+RVE + E ML+R F +F + L ++ L + +
Sbjct: 580 QDRLNSAFHLGYNMILNLMRVEGISPEFMLERCFYQFQNTAGLAGLEKELAE--LEEKRA 637
Query: 916 IECIKGEPAIEEYYDMYYEAEKYNNQITEAFMQSAHQ--FLMPGRVLFVKSQTGQDHLLG 973
I E I EYYD+ + +++N+ + + FL PGR+L +K + D G
Sbjct: 638 NMTISDEGTIREYYDIRTQIDQFNDDVRAVISHPEYSVPFLTPGRLLHIKYKDF-DFGWG 696
Query: 974 AVV----KAPSANNKE------YIV-MLLKPDLPSASETSLDKKSGDFSEGYFVIPKSKR 1022
VV + P N++E YIV +LL+ S+S T K D +G PK
Sbjct: 697 VVVNIKKRKPQKNSEELTGHASYIVDVLLRVADGSSSGT---KTFEDLPQGVRP-PKEGE 752
Query: 1023 GLEEEY------C-GSVSHRKGSGVINIKLPYHGAAAGVSYEVRGIDKK--ELLCICNCK 1073
+ E C ++SH + ++ L + + +V I K+ + + + +
Sbjct: 753 KSQMEVVPLLLNCIQAISHVRM--IVPKDLQSKDSRTDMGKKVEQIKKRFPDGIAVLD-- 808
Query: 1074 IKIDQVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAG 1133
I+ +G+ +D F KT++++ VL+S P P +L++ L E Y +
Sbjct: 809 -PIEDMGIKDD----EFKKTLRKIEVLESRLVTNPLHNSP----RLEE--LYEQYAEKLD 857
Query: 1134 LLRKMAANK 1142
L K+ A K
Sbjct: 858 LGNKIKATK 866
Score = 441 (160.3 bits), Expect = 2.9e-94, Sum P(2) = 2.9e-94
Identities = 131/414 (31%), Positives = 211/414 (50%)
Query: 982 NNKEYIVMLLKPDLPSASETSLDKKSGDFSEGYFV-IPKSK-RGLEEEYCGSVSH----- 1034
++ EY V L P + K DF G V I K K + EE G S+
Sbjct: 669 SHPEYSVPFLTP----GRLLHIKYKDFDFGWGVVVNIKKRKPQKNSEELTGHASYIVDVL 724
Query: 1035 -RKGSGVINIKLPYHGAAAGVSYEVRGIDKKELLCI---CNCKIKIDQVGLL--EDVSSA 1088
R G + + GV G +K ++ + NC I V ++ +D+ S
Sbjct: 725 LRVADGSSSGTKTFEDLPQGVRPPKEG-EKSQMEVVPLLLNCIQAISHVRMIVPKDLQSK 783
Query: 1089 AFSKTVQQLLVLKSDEKKYPQA---LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHG 1145
S+T V + +K++P LDP++D+ +KD + K L ++ N H
Sbjct: 784 D-SRTDMGKKV-EQIKKRFPDGIAVLDPIEDMGIKDDEFKKTLRKIEVLESRLVTNPLHN 841
Query: 1146 CIKLEEHMKLTKENKRHKDEVNTLKFQMSDE-ALQQMPDFQGRIDVLKEIGCIDADLVVQ 1204
+LEE + E +++ K ++S+ A+QQ+ + + R VL+ G I+ VVQ
Sbjct: 842 SPRLEELYEQYAEKLDLGNKIKATKKKISEGMAIQQLDELKCRKRVLRRFGFINEAEVVQ 901
Query: 1205 IKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVA 1264
+K RVACE+++G+EL+ +E LF + L PE+A A++S FVF+++ P L+ K +A
Sbjct: 902 LKARVACEISTGDELMLSELLFNGFFNKLTPEQAAAVLSVFVFEEKTKETPPLS-KEELA 960
Query: 1265 K--ERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDV 1322
K + + A + ++ K+ + E+Y + + + L+EV+YEWA G FADIC +TDV
Sbjct: 961 KPLKEIQAQARIIAKVAQESKLAVSEEDYVQ-SFHWELMEVIYEWANGKSFADICGMTDV 1019
Query: 1323 PEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
EG ++R RL+E R+ AA +MG+ L K ETA ++RDIV A SLY+
Sbjct: 1020 YEGSLIRVFRRLEECLRQMAQAAKVMGSEELESKFETALTKVRRDIVAAQSLYL 1073
Score = 41 (19.5 bits), Expect = 4.1e-50, Sum P(2) = 4.1e-50
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 229 SSLKSTSDEKLNELSVQFDDL 249
S +K+ S++K E + +F D+
Sbjct: 202 SPIKALSNQKYREFAAEFGDV 222
>UNIPROTKB|D4AE49 [details] [associations]
symbol:D4AE49 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR012961 Pfam:PF00271 Pfam:PF08148 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00690000102230 InterPro:IPR025696 Pfam:PF13234
IPI:IPI00776783 PRIDE:D4AE49 Ensembl:ENSRNOT00000060695
ArrayExpress:D4AE49 Uniprot:D4AE49
Length = 764
Score = 441 (160.3 bits), Expect = 5.1e-86, Sum P(3) = 5.1e-86
Identities = 88/194 (45%), Positives = 124/194 (63%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDR 735
++ + +++ PV+IF FSK C+ A M+ +D + EK + + A L D+
Sbjct: 121 IVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDK 180
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
LPQ+ V LL+RGI IHH GLLPI+KE IE+LF G++K LF+TETFAMG+N PARTV
Sbjct: 181 KLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTV 240
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIV-G 854
+F N RK+DG++FR + GEY QM+GRAGRRG+D G +V+L DE + K ++ G
Sbjct: 241 LFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMDDRG-IVILMVDEKMSPTIGKQLLKKG 299
Query: 855 SATRLESQFRLTYI 868
+L + L YI
Sbjct: 300 QGDKLSATHALVYI 313
Score = 380 (138.8 bits), Expect = 5.1e-86, Sum P(3) = 5.1e-86
Identities = 97/286 (33%), Positives = 153/286 (53%)
Query: 1099 VLKSDE---KKYPQA---LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEH 1152
VLKS + K++P LDP+ D+ ++D L + K +M ++ H LE
Sbjct: 481 VLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETV 540
Query: 1153 MKLTKENKRHKDEVNTLKFQMSD-EALQQMPDFQGRIDVLKEIG-CIDADLVVQIKGRVA 1210
L ++ + ++ + K ++ + QM + + R L G DL+ + KG
Sbjct: 541 YTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKPCLFRPGKAFLLDLIHR-KGYHF 599
Query: 1211 CEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLYN 1270
C + +EL+ TE +F +DL E+A A++S FVFQ+ ++ P LT +L+ ++
Sbjct: 600 CYKSCADELLLTEMMFNGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQE 659
Query: 1271 TAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRT 1330
A R+ ++ A K++ID E Y + K L++VVY WA G FA IC++TDV EG I+R
Sbjct: 660 CAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRC 718
Query: 1331 IVRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
+ RL+E R+ AA +GN+ L K IKRDIVFAASLY+
Sbjct: 719 MRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 764
Score = 173 (66.0 bits), Expect = 5.1e-86, Sum P(3) = 5.1e-86
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 517 VNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
+ D ERGVVWEE II+LP +++ V LSAT+PN +FA+WI ++ V T RP PL
Sbjct: 1 MRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPL 60
Query: 577 EHCLYYSG 584
+H ++ +G
Sbjct: 61 QHYIFPAG 68
Score = 40 (19.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1212 EMNSGEELICTECLFENQLDDLEPEE 1237
+ N+ EE E +F N +D L E+
Sbjct: 154 DFNTDEEKKMVEEVFNNAIDCLSDED 179
Score = 37 (18.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 587 YKVCENEAFIPQGWKAAKDAYKR 609
Y +CE +A I K+AK K+
Sbjct: 541 YTLCEKKAQIAIDIKSAKRELKK 563
>UNIPROTKB|Q10701 [details] [associations]
symbol:helY "Probable helicase HelY" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842578 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 PIR:G70767 RefSeq:NP_216608.1 RefSeq:NP_336620.1
RefSeq:YP_006515507.1 ProteinModelPortal:Q10701 SMR:Q10701
PRIDE:Q10701 EnsemblBacteria:EBMYCT00000003887
EnsemblBacteria:EBMYCT00000069683 GeneID:13316898 GeneID:887736
GeneID:924573 KEGG:mtc:MT2153 KEGG:mtu:Rv2092c KEGG:mtv:RVBD_2092c
PATRIC:18126496 TubercuList:Rv2092c HOGENOM:HOG000245391 KO:K03727
OMA:ANESAWQ ProtClustDB:CLSK791623 Uniprot:Q10701
Length = 906
Score = 412 (150.1 bits), Expect = 2.1e-74, Sum P(3) = 2.1e-74
Identities = 86/189 (45%), Positives = 119/189 (62%)
Query: 396 DFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTI 455
+ PF LD+FQ+ A LE G V V A T AGKTVV E+A LA ++ YT P+K +
Sbjct: 13 ELPFSLDDFQQRACSALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGSKCFYTTPLKAL 72
Query: 456 SNQKYRDFSGKF---DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFD 512
SNQK+ D + ++ +GLLTGD+S+ A ++MTTE+LR+MLY + ++ + +V+ D
Sbjct: 73 SNQKHTDLTARYGRDQIGLLTGDLSVNGNAPVVVMTTEVLRNMLYADSPALQGLSYVVMD 132
Query: 513 EVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKR 572
EVH++ D RG VWEEVI+ LP + +V LSATV N EF WI +T + V R
Sbjct: 133 EVHFLADRMRGPVWEEVILQLPDDVRVVSLSATVSNAEEFGGWI-QTVRGDTTVVVDEHR 191
Query: 573 PVPL-EHCL 580
PVPL +H L
Sbjct: 192 PVPLWQHVL 200
Score = 371 (135.7 bits), Expect = 2.1e-74, Sum P(3) = 2.1e-74
Identities = 86/226 (38%), Positives = 127/226 (56%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGM--SGIDLTSSSEKSEIRVFCDKAFSRLKGS 733
+I KL + LLP + F FS+ CD S + LTS E++ I D L S
Sbjct: 263 VIAKLDAEGLLPAITFVFSRAGCDAAVTQCLRSPLRLTSEEERARIAEVIDHRCGDLADS 322
Query: 734 DRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPAR 793
D + + L RG+A HHAG+LP + +E LF G+VK +F+TET A+G+N PAR
Sbjct: 323 DLAVLGYYEWREGLLRGLAAHHAGMLPAFRHTVEELFTAGLVKAVFATETLALGINMPAR 382
Query: 794 TVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIV 853
TVV + L KF+G + L PGEYTQ+ GRAGRRG+D G VV+ EI S++ +
Sbjct: 383 TVVLERLVKFNGEQHMPLTPGEYTQLTGRAGRRGIDVEGHAVVIWHPEIE-PSEVAGLAS 441
Query: 854 GSATRLESQFRLTYIMILHLL-RVEELKVEDMLKRSFAEFHSQKKL 898
L S F +Y M ++L+ R+ + +L++SFA++ + + +
Sbjct: 442 TRTFPLRSSFAPSYNMTINLVHRMGPQQAHRLLEQSFAQYQADRSV 487
Score = 110 (43.8 bits), Expect = 2.1e-74, Sum P(3) = 2.1e-74
Identities = 59/206 (28%), Positives = 85/206 (41%)
Query: 1184 FQGRIDVLKEIGCIDA---DLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVA 1240
F + +L E ID D VV GR+ + S +L+ ECL + L+P E
Sbjct: 708 FDRFVGLLTEREFIDGPATDPVVTDDGRLLARIYSESDLLVAECLRTGAWEGLKPAELAG 767
Query: 1241 IMSAFVFQQRNTSEPSL-------TPKLSVA---KERLYNTAIRLGELQAHFKVQIDPEE 1290
++SA V++ R TP+L A RL +T +R E QAH +I P
Sbjct: 768 VVSAVVYETRGGDGQGAPFGADVPTPRLRQALTQTSRL-STTLRADE-QAH---RITPSR 822
Query: 1291 YARDNLKFGLVEVVYEWAKGTPFADICELTDV-----P--EGLIVRTIVRLDETCREFRN 1343
D G V V+Y W++ A DV P G VR ++ + + RN
Sbjct: 823 EPDD----GFVRVIYRWSRTGDLAAALAAADVNGSGSPLLAGDFVRWCRQVLDLLDQVRN 878
Query: 1344 AAAIMGNSALYKKMETASNAIKRDIV 1369
AA N L + A I+R +V
Sbjct: 879 AAP---NPELRATAKRAIGDIRRGVV 901
Score = 65 (27.9 bits), Expect = 7.3e-36, Sum P(2) = 7.3e-36
Identities = 56/242 (23%), Positives = 97/242 (40%)
Query: 1075 KIDQVGLLEDVS--------SAAFSKTVQQLLVLKSDEKK--YPQALDP-VKDLKLKDMN 1123
K+D GLL ++ AA ++ ++ L L S+E++ + +D DL D+
Sbjct: 266 KLDAEGLLPAITFVFSRAGCDAAVTQCLRSPLRLTSEEERARIAEVIDHRCGDLADSDLA 325
Query: 1124 LVEAYYKWA-GLLRKMAANKCHGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMP 1182
++ YY+W GLLR +AA+ G + H T E +K + E L
Sbjct: 326 VL-GYYEWREGLLRGLAAHHA-GMLPAFRH---TVEELF---TAGLVKAVFATETLALGI 377
Query: 1183 DFQGRIDVLKEIGCIDADLVVQIKGRVACEMN--SGEELICTEC-LFENQLDDLEPEEAV 1239
+ R VL+ + + + + + ++ +G I E ++EP E
Sbjct: 378 NMPARTVVLERLVKFNGEQHMPLTPGEYTQLTGRAGRRGIDVEGHAVVIWHPEIEPSEVA 437
Query: 1240 AIMSAFVFQQRNTSEPSLTPKLSVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFG 1299
+ S F R++ PS + N R+G QAH ++ +Y D G
Sbjct: 438 GLASTRTFPLRSSFAPSYNMTI--------NLVHRMGPQQAHRLLEQSFAQYQADRSVVG 489
Query: 1300 LV 1301
LV
Sbjct: 490 LV 491
>TAIR|locus:2020573 [details] [associations]
symbol:EMB25 "EMBRYO DEFECTIVE 25" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] [GO:0010497 "plasmodesmata-mediated intercellular
transport" evidence=NAS;IMP] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0016441 "posttranscriptional gene silencing"
evidence=IMP] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0016556 "mRNA modification" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0009570 GO:GO:0003676
GO:GO:0009793 GO:GO:0031047 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010494 GO:GO:0008026 EMBL:AC002062
GO:GO:0003724 GO:GO:0010497 eggNOG:COG4581 GO:GO:0016441
HOGENOM:HOG000245391 EMBL:AK316759 EMBL:AF387007 IPI:IPI00538730
PIR:D96723 RefSeq:NP_177164.1 UniGene:At.35348
ProteinModelPortal:B9DFG3 SMR:B9DFG3 PaxDb:B9DFG3 PRIDE:B9DFG3
EnsemblPlants:AT1G70070.1 GeneID:843343 KEGG:ath:AT1G70070
GeneFarm:2280 TAIR:At1g70070 InParanoid:Q94EZ6 OMA:PSYGMVL
PhylomeDB:B9DFG3 ProtClustDB:CLSN2682754 Genevestigator:B9DFG3
Uniprot:B9DFG3
Length = 1171
Score = 715 (256.8 bits), Expect = 2.0e-67, Sum P(3) = 2.0e-67
Identities = 186/498 (37%), Positives = 265/498 (53%)
Query: 390 VPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYT 449
+ +L + F +D FQ+ AI G SV V+A TS+GKT++AE A R YT
Sbjct: 144 IDELISIYDFRIDKFQRLAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVSTVAKGRRLFYT 203
Query: 450 APIKTISNQKYRDFSGKF---DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRD- 505
P+K +SNQK+R+F F +VGLLTGD ++ +A +IMTTEILR+MLY+ +
Sbjct: 204 TPLKALSNQKFREFRETFGDDNVGLLTGDSAINKDAQIVIMTTEILRNMLYQSVGMASSG 263
Query: 506 -----IEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTK 560
++ ++ DEVHY++DI RG VWEE++I P+ + ++ LSATV N E A WIG
Sbjct: 264 TGLFHVDAIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGEIH 323
Query: 561 QKKIRVTGTTKRPVPLEHCLYYSGEFYKVCENEAFIPQGWKAAKDAYKRKNLXXXXXXXX 620
K VT +T+RPVPL Y+S + + +P + + ++ +L
Sbjct: 324 GKTELVT-STRRPVPLTW--YFSTK-------HSLLPLLDEKGINVNRKLSLNYLQLSAS 373
Query: 621 XXXXXXXPRDGARAQKREHPNRGKQNKHS-VVGIKNSGGSQNNWG-LRRSEVSIWLTLIN 678
DG R KR RG ++ +V + + S+N +RRS+V +
Sbjct: 374 EARFRDDD-DGYR--KRRSKKRGGDTSYNNLVNVTDYPLSKNEINKIRRSQVPQISDTLW 430
Query: 679 KLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLP 738
L K++LP + F F++ CD + L EKSE+ + K F L P
Sbjct: 431 HLQGKNMLPAIWFIFNRRGCDAAVQYVENFQLLDDCEKSEVELALKK-FRVL------YP 483
Query: 739 QIVR--VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVV 796
VR + L RGIA HHAG LP+ K IE LF RG+VKV+F+TET A G+N PART V
Sbjct: 484 DAVRESAEKGLLRGIAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAV 543
Query: 797 FDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSA 856
+L K G E +L P E QMAGRAGRRG+D+ G VL + G + ++
Sbjct: 544 ISSLSKKAGNERIELGPNELYQMAGRAGRRGIDEKG-YTVLVQTAFEGAEECCKLVFAGV 602
Query: 857 TRLESQFRLTYIMILHLL 874
L SQF +Y M+L+L+
Sbjct: 603 KPLVSQFTASYGMVLNLV 620
Score = 53 (23.7 bits), Expect = 2.0e-67, Sum P(3) = 2.0e-67
Identities = 25/102 (24%), Positives = 41/102 (40%)
Query: 1148 KLEEHMKLTKEN-KRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDAD--LVVQ 1204
K+ E+ LT E KR K L ++ DF +V+ E +D + L+
Sbjct: 944 KILENANLTVEKMKRLKARSRRLINRLEQIEPSGWKDFMRISNVIHESRALDINTHLIFP 1003
Query: 1205 IKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFV 1246
+ G A + EL L L DL+P + + ++ V
Sbjct: 1004 L-GETAAAIRGENELWLAMVLRNKALVDLKPPQLAGVCASLV 1044
Score = 43 (20.2 bits), Expect = 2.0e-67, Sum P(3) = 2.0e-67
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 230 SLKSTSDEKLNELSVQFDDLFKKAWEEDVAEFEKDD 265
S KST LN LS L+++ +E+ E ++DD
Sbjct: 47 SFKST----LNSLSPSQSQLYEEEDDEEEEEEDEDD 78
>RGD|1305984 [details] [associations]
symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000460
"maturation of 5.8S rRNA" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0000178 "exosome (RNase complex)" evidence=ISO]
InterPro:IPR012961 Pfam:PF08148 RGD:1305984 GO:GO:0005524
GO:GO:0016818 eggNOG:COG4581 HOGENOM:HOG000163047
InterPro:IPR025696 Pfam:PF13234 OrthoDB:EOG4D52WW IPI:IPI00372914
EMBL:BC091305 UniGene:Rn.145315 STRING:Q5BJW0 InParanoid:Q5BJW0
Genevestigator:Q5BJW0 Uniprot:Q5BJW0
Length = 337
Score = 443 (161.0 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 102/285 (35%), Positives = 163/285 (57%)
Query: 1099 VLKSDE---KKYPQA---LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEH 1152
VLKS + K++P LDP+ D+ ++D L + K +M ++ H LE
Sbjct: 54 VLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETV 113
Query: 1153 MKLTKENKRHKDEVNTLKFQMSD-EALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVAC 1211
L ++ + ++ + K ++ + QM + + R VL+ +G + V+++KGRVAC
Sbjct: 114 YTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVAC 173
Query: 1212 EMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKERLYNT 1271
E++S +EL+ TE +F +DL E+A A++S FVFQ+ ++ P LT +L+ ++
Sbjct: 174 EISSADELLLTEMMFNGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQEC 233
Query: 1272 AIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTI 1331
A R+ ++ A K++ID E Y + K L++VVY WA G FA IC++TDV EG I+R +
Sbjct: 234 AKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCM 292
Query: 1332 VRLDETCREFRNAAAIMGNSALYKKMETASNAIKRDIVFAASLYI 1376
RL+E R+ AA +GN+ L K IKRDIVFAASLY+
Sbjct: 293 RRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 337
>UNIPROTKB|H7C4L3 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] InterPro:IPR012961 Pfam:PF08148
GO:GO:0005524 EMBL:AL645922 GO:GO:0016818 HGNC:HGNC:10898
ChiTaRS:SKIV2L ProteinModelPortal:H7C4L3 PRIDE:H7C4L3
Ensembl:ENST00000491994 Uniprot:H7C4L3
Length = 182
Score = 281 (104.0 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 65/164 (39%), Positives = 97/164 (59%)
Query: 1147 IKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADLVVQIK 1206
+KL E M++ KE +R L+F +SD++L +P++ R++VL+ +G +D V++
Sbjct: 24 LKLRERMQIQKEMER-------LRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLA 76
Query: 1207 GRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSVAKE 1266
GRVAC M+S EL+ TE +F+N L L PEE A++S V Q + L L E
Sbjct: 77 GRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIE 135
Query: 1267 RLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKG 1310
R+ A R+GE+Q + EE+ + L FGLVEVVYEWA+G
Sbjct: 136 RVRAVAKRIGEVQVACGLNQTVEEFVGE-LNFGLVEVVYEWARG 178
>RGD|1560014 [details] [associations]
symbol:Ddx60 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 60"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003723 "RNA binding" evidence=ISO] [GO:0003725
"double-stranded RNA binding" evidence=ISO] [GO:0003727
"single-stranded RNA binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009615 "response to virus" evidence=ISO] [GO:0051607 "defense
response to virus" evidence=ISO] [GO:1900245 "positive regulation
of MDA-5 signaling pathway" evidence=ISO] [GO:1900246 "positive
regulation of RIG-I signaling pathway" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1560014 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00690000102154 IPI:IPI00358301
Ensembl:ENSRNOT00000019667 Uniprot:F1M4N8
Length = 1304
Score = 185 (70.2 bits), Expect = 2.4e-21, Sum P(4) = 2.4e-21
Identities = 48/143 (33%), Positives = 78/143 (54%)
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVF-DNLR 801
++ L RRGI HH+ + K+++E+LF +G ++V+ +T T ++G+N P ++VVF N
Sbjct: 845 LKKLARRGIGYHHSSMTNKEKQLVEILFRKGFIRVVTATRTLSLGINMPCKSVVFAQNSV 904
Query: 802 KFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLES 861
D +RQ M+GRAGRRG D +G V +IP + +I L
Sbjct: 905 YLDALNYRQ--------MSGRAGRRGQDLLGDVYFF---DIPLPK-IGKLIKSKVPDLRG 952
Query: 862 QFRLTYIMILHLLRVEELKVEDM 884
QF L+ +IL L+ + K +D+
Sbjct: 953 QFPLSITLILRLMLLAT-KADDL 974
Score = 167 (63.8 bits), Expect = 2.4e-21, Sum P(4) = 2.4e-21
Identities = 51/186 (27%), Positives = 90/186 (48%)
Query: 402 DNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAV--YTAPIKTISNQ- 458
D +Q+E + ++N +S + A TS+GKT + Y K V Y AP K + NQ
Sbjct: 357 DTWQRELLDVVDNYESAVIVAPTSSGKTYASYYCMEKVLKESNEGVVVYVAPTKALVNQV 416
Query: 459 ------KY-RDF-SGKFDVGLLTGDVSLRPEASCLIMTT----EILRSMLYRGADIIRDI 506
+Y ++ +G+ G+ T D S +++T EIL +R + ++ I
Sbjct: 417 AATVQNRYTKNMPAGEVLCGVFTSDYHHEALNSQVLITMPACFEILLLAPHR-QNWVKRI 475
Query: 507 EWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRV 566
+VIFDEVH + R +WE +++M+ + LSAT+ N +W+ K+ ++
Sbjct: 476 RYVIFDEVHCIGGEIRAEIWEHLLVMI--RCPFLALSATISNPQHLTEWLQSVKRYWKQI 533
Query: 567 TGTTKR 572
T ++
Sbjct: 534 DSTMEQ 539
Score = 52 (23.4 bits), Expect = 2.4e-21, Sum P(4) = 2.4e-21
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGM 705
L+ KL K LP V F FS + ++ A+ +
Sbjct: 709 LVEKLRKMEKLPAVFFLFSLDTVEECAESV 738
Score = 45 (20.9 bits), Expect = 2.4e-21, Sum P(4) = 2.4e-21
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 12 FRVGFSGHSGHLRVEPLYTV-EDRTDPIKSLPDFILPPAFPRETAESIKEH 61
+ VG L+ Y + E+R DP + DFI P + RE + + +
Sbjct: 321 YSVGIGPARFQLQYMGHYLIREERKDPDPRVQDFI-PDTWQRELLDVVDNY 370
Score = 37 (18.1 bits), Expect = 2.5e-08, Sum P(4) = 2.5e-08
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 551 EFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGE 585
EF +W+ +K+ R+ K P H YSG+
Sbjct: 671 EFTNWVKNGNEKEARLV--LKNLSPDYHD--YSGQ 701
>UNIPROTKB|Q8IY21 [details] [associations]
symbol:DDX60 "Probable ATP-dependent RNA helicase DDX60"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0009615 "response to
virus" evidence=IDA] [GO:0003725 "double-stranded RNA binding"
evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:1900245 "positive regulation of MDA-5 signaling
pathway" evidence=IMP] [GO:1900246 "positive regulation of RIG-I
signaling pathway" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003727 GO:GO:0045087 GO:GO:0051607 GO:GO:0009615
GO:GO:0003690 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC068989 EMBL:BC007820
EMBL:BC038115 EMBL:AK001649 IPI:IPI00217606 RefSeq:NP_060101.3
UniGene:Hs.591710 ProteinModelPortal:Q8IY21 SMR:Q8IY21
IntAct:Q8IY21 STRING:Q8IY21 PhosphoSite:Q8IY21 DMDM:296439377
PaxDb:Q8IY21 PRIDE:Q8IY21 Ensembl:ENST00000393743 GeneID:55601
KEGG:hsa:55601 UCSC:uc003irp.3 CTD:55601 GeneCards:GC04M169137
HGNC:HGNC:25942 HPA:HPA046952 MIM:613974 neXtProt:NX_Q8IY21
PharmGKB:PA162383444 eggNOG:COG4581 HOGENOM:HOG000169263
HOVERGEN:HBG107797 InParanoid:Q8IY21 OMA:QDCTYAD OrthoDB:EOG4XSKP0
PhylomeDB:Q8IY21 GenomeRNAi:55601 NextBio:60142 ArrayExpress:Q8IY21
Bgee:Q8IY21 CleanEx:HS_DDX60 Genevestigator:Q8IY21 GO:GO:1900245
GO:GO:1900246 Uniprot:Q8IY21
Length = 1712
Score = 181 (68.8 bits), Expect = 5.7e-20, Sum P(4) = 5.7e-20
Identities = 53/167 (31%), Positives = 87/167 (52%)
Query: 709 DLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEM 768
D T + +K+ K F R+K +R ++ ++L RGI HH+ + K+++E+
Sbjct: 1223 DCTYADQKAVDTETLQKVFGRVK-FERKGEEL---KALAERGIGYHHSAMSFKEKQLVEI 1278
Query: 769 LFCRGVVKVLFSTETFAMGVNAPARTVVF-DNLRKFDGREFRQLLPGEYTQMAGRAGRRG 827
LF +G ++V+ +T T A+GVN P ++VVF N D +RQ M+GRAGRRG
Sbjct: 1279 LFRKGYLRVVTATGTLALGVNMPCKSVVFAQNSVYLDALNYRQ--------MSGRAGRRG 1330
Query: 828 LDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLL 874
D +G V +IP + +I + L F L+ ++L L+
Sbjct: 1331 QDLMGDVYFF---DIPFPK-IGKLIKSNVPELRGHFPLSITLVLRLM 1373
Score = 165 (63.1 bits), Expect = 5.7e-20, Sum P(4) = 5.7e-20
Identities = 49/174 (28%), Positives = 81/174 (46%)
Query: 402 DNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAV--YTAPIKTISNQK 459
D +Q+E + ++ +S + A TS+GKT + Y K V Y AP K + NQ
Sbjct: 765 DTWQRELLDVVDKNESAVIVAPTSSGKTYASYYCMEKVLKESDDGVVVYVAPTKALVNQV 824
Query: 460 YRDFSGKFDVGLLTGDV-------SLRPEA-SCLIMTT-----EILRSMLYRGADIIRDI 506
+F L +G+V R +A +C ++ T EIL +R + ++ I
Sbjct: 825 AATVQNRFTKNLPSGEVLCGVFTREYRHDALNCQVLITVPACFEILLLAPHR-QNWVKKI 883
Query: 507 EWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTK 560
+VIFDEVH + +WE +++M+ + LSAT+ N +W+ K
Sbjct: 884 RYVIFDEVHCLGGEIGAEIWEHLLVMI--RCPFLALSATISNPEHLTEWLQSVK 935
Score = 49 (22.3 bits), Expect = 5.7e-20, Sum P(4) = 5.7e-20
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 670 VSIWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMS 706
++++ L+ KL K LP + F F + A+ +S
Sbjct: 1111 ITMFPLLVEKLRKMEKLPALFFLFKLGAVENAAESVS 1147
Score = 46 (21.3 bits), Expect = 5.7e-20, Sum P(4) = 5.7e-20
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 220 WNVYKDQDQSSLKSTSDEKLNELSVQ-FDDLFKKAWEEDV 258
W + ++ +DE LN+L Q F+ L +W V
Sbjct: 131 WGSFLEESYPYFLIVADEGLNDLQTQLFNFLIIHSWARKV 170
Score = 43 (20.2 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 27/134 (20%), Positives = 52/134 (38%)
Query: 791 PARTVVFDN---LRKFDGREFRQLLPGEYTQMA--GRA--GRRGLDKIGTVVVLCRDEIP 843
P + F+N ++K D R++ + L E T G R L + L + +
Sbjct: 1052 PENFIHFNNKLVIKKMDARKYEESLKAELTSWIKNGNVEQARMVLQNLSPEADLSPENM- 1110
Query: 844 GESDLKHIIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQ 903
+ ++V ++E L ++ L + V LK+ E K ++
Sbjct: 1111 --ITMFPLLVEKLRKMEKLPALFFLFKLGAVENAAESVSTFLKKK-QETKRPPKADKEAH 1167
Query: 904 LLMRKLAQPPKTIE 917
++ KL + K+IE
Sbjct: 1168 VMANKLRKVKKSIE 1181
Score = 40 (19.1 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 1096 QLLVLKSDEKKYPQALDPVKDLKLKDMNLVEA 1127
+L++ K D +KY ++L +K+ N+ +A
Sbjct: 1061 KLVIKKMDARKYEESLKAELTSWIKNGNVEQA 1092
>WB|WBGene00016194 [details] [associations]
symbol:C28H8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000287 "magnesium ion
binding" evidence=IEA] [GO:0004427 "inorganic diphosphatase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006796 "phosphate-containing compound metabolic process"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 GO:GO:0008026 EMBL:FO080703
eggNOG:COG4581 GeneTree:ENSGT00690000102154 PIR:A88470
RefSeq:NP_498283.1 ProteinModelPortal:Q09475 SMR:Q09475
STRING:Q09475 PaxDb:Q09475 EnsemblMetazoa:C28H8.3.1
EnsemblMetazoa:C28H8.3.2 GeneID:175834 KEGG:cel:CELE_C28H8.3
UCSC:C28H8.3.1 CTD:175834 WormBase:C28H8.3 HOGENOM:HOG000018763
InParanoid:Q09475 OMA:YARFRNK NextBio:889866 Uniprot:Q09475
Length = 1714
Score = 218 (81.8 bits), Expect = 1.5e-19, Sum P(5) = 1.5e-19
Identities = 65/177 (36%), Positives = 92/177 (51%)
Query: 725 KAFSRL-KGSD-RNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTE 782
K R+ KG+ R Q++ L RGI HHAGL + + +E+LF G + VLFST
Sbjct: 1256 KMVERMQKGAKTRESTQVLL--KLFERGIGYHHAGLNTVERGAVEVLFRSGNLAVLFSTS 1313
Query: 783 TFAMGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEI 842
T ++GVN P +TV+F G + QL P Y QM+GRAGRRG D G V+ + I
Sbjct: 1314 TLSLGVNMPCKTVMF-------GVDTLQLTPLLYRQMSGRAGRRGFDHSGNVIFM---SI 1363
Query: 843 PGESDLKHIIVGSATRLESQFRLTYIMILHL---------LRVEELKVEDMLKRSFA 890
P S ++ ++ S + L+ T + +L L L E KV M +R+FA
Sbjct: 1364 P-TSKVRRLLTASLSNLQGNPPFTVLFLLRLFAYVHQQDILNEEGQKVSTMKQRAFA 1419
Score = 129 (50.5 bits), Expect = 1.5e-19, Sum P(5) = 1.5e-19
Identities = 48/160 (30%), Positives = 77/160 (48%)
Query: 447 VYTAPIKTISNQ-------KYRDFSGKFDV---GLLTGDVSLRP-EASCLIMTTEILRS- 494
VY AP K + NQ ++R+ S K + G LT + S + LI E L+
Sbjct: 833 VYVAPSKALINQVCGSVYARFRNKSMKRGISLFGTLTQEYSQNAMQCQVLITVPECLQEL 892
Query: 495 MLYRGADI---IRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVE 551
ML R + + I++V+FDEVH + E +WE++++++ + LSAT+ N +
Sbjct: 893 MLSRTPAVQKFVSHIKYVVFDEVHSIGASEESHIWEQLLLLI--QCPFLALSATIGNANK 950
Query: 552 FADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGEFYKVCE 591
+W+ ++Q K KR V L + Y GE Y E
Sbjct: 951 LHEWLNSSEQAK----SAGKRKVEL---INY-GERYSELE 982
Score = 58 (25.5 bits), Expect = 1.5e-19, Sum P(5) = 1.5e-19
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 674 LTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEI 719
+TL++ L +K LP + F ++ C+KLA + L + E+ E+
Sbjct: 1132 VTLVDDLKEKGELPAICFNDDRHVCEKLA-----VTLANELERREL 1172
Score = 39 (18.8 bits), Expect = 1.5e-19, Sum P(5) = 1.5e-19
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 412 LENGDSVF-VAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRD 462
L +G V+ + SA +TV+ K+ +A T P+ T +N+K D
Sbjct: 404 LWDGRMVYSIFDELSANETVLPYRLQDDFAKYHQKAGLTVPLATDTNEKLFD 455
Score = 37 (18.1 bits), Expect = 1.5e-19, Sum P(5) = 1.5e-19
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 230 SLKSTSDEKLNELSVQFDDLFKKAWEEDVAEF 261
S K+ SD+ + SV DDL +V F
Sbjct: 51 SEKNASDDDSDASSVMSDDLESLGETTEVLNF 82
>UNIPROTKB|J9P0M0 [details] [associations]
symbol:DDX60 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102154 EMBL:AAEX03010133 EMBL:AAEX03010134
EMBL:AAEX03010135 Ensembl:ENSCAFT00000044956 Uniprot:J9P0M0
Length = 1708
Score = 182 (69.1 bits), Expect = 1.7e-19, Sum P(5) = 1.7e-19
Identities = 54/176 (30%), Positives = 91/176 (51%)
Query: 709 DLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEM 768
+ T +++K+ F R+K + + +++L RRGI HH+ L K+++E+
Sbjct: 1219 ECTYANQKAIDAETLQMVFDRVKFTRKG----AELKALARRGIGYHHSSLSFKDKQLVEV 1274
Query: 769 LFCRGVVKVLFSTETFAMGVNAPARTVVF-DNLRKFDGREFRQLLPGEYTQMAGRAGRRG 827
LF +G ++V+ +T T A+G+N P ++VVF N D +RQ M+GRAGRRG
Sbjct: 1275 LFRKGFIRVVTATGTLALGINMPCKSVVFAQNSIYLDALNYRQ--------MSGRAGRRG 1326
Query: 828 LDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLLRVEELKVED 883
D +G V IP ++ +I + L QF L ++L L+ + K +D
Sbjct: 1327 QDLMGDVYFF---GIPLPK-IEKLIKSNVPELRGQFPLGITLVLRLMLLAS-KADD 1377
Score = 171 (65.3 bits), Expect = 1.7e-19, Sum P(5) = 1.7e-19
Identities = 52/174 (29%), Positives = 80/174 (45%)
Query: 402 DNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAV--YTAPIKTISNQK 459
D +Q+E + ++N +S + A TS+GKT + Y K V Y AP K + NQ
Sbjct: 761 DTWQRELLDVVDNNESAVIVAPTSSGKTYASYYCMEKVLKESNEGVVVYVAPTKALVNQV 820
Query: 460 YRDFSGKFDVGLLTGDV-------SLRPEA-SCLIMTT-----EILRSMLYRGADIIRDI 506
+F L G+ R +A +C ++ T EIL +R A + R I
Sbjct: 821 AATVHNRFTKSLPNGEALCGVFTRDYRHDALNCQVLITVPACFEILLLSPHRQAWVKR-I 879
Query: 507 EWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTK 560
+VIFDEVH + VWE +++M+ + LSAT+ N +W+ K
Sbjct: 880 RYVIFDEVHCLGGEIGAEVWEHLLVMI--RCPFLALSATISNPEHLTEWLQSVK 931
Score = 58 (25.5 bits), Expect = 8.5e-07, Sum P(4) = 8.5e-07
Identities = 39/164 (23%), Positives = 70/164 (42%)
Query: 791 PARTVVFDN---LRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVV-LCRDEI-PGE 845
P R + F + +RK D R++ + L E T + G ++ TV+ LC D + E
Sbjct: 1048 PERFIHFKDKIVIRKLDARKYEESLKAELTSWV-KNGHA--EEAKTVLKNLCPDSVFSSE 1104
Query: 846 SDLKH--IIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQ 903
+ + ++V ++E L ++ L + + L R A K E
Sbjct: 1105 NTVSMFPLLVEKLRKMEKLPALFFLFNLEDVERRAASLRYFLLRKQAMQRPPKADKEAHD 1164
Query: 904 LL-----MRKLAQPPKTIE--CIKGEPAIEEYYDMYYEAEKYNN 940
L+ +RK + KTI+ +K +++ + YEAE +NN
Sbjct: 1165 LINKIRKIRKSIERQKTIDERSLKNPRKMDQ--KLIYEAE-HNN 1205
Score = 49 (22.3 bits), Expect = 1.7e-19, Sum P(5) = 1.7e-19
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 670 VSIWLTLINKLSKKSLLPVVIFCFSKNHCDKLA 702
VS++ L+ KL K LP + F F+ ++ A
Sbjct: 1107 VSMFPLLVEKLRKMEKLPALFFLFNLEDVERRA 1139
Score = 43 (20.2 bits), Expect = 1.7e-19, Sum P(5) = 1.7e-19
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 220 WNVYKDQDQSSLKSTSDEKLNEL-SVQFDDLFKKAW 254
W ++ ++ +DE LN L ++ F L ++W
Sbjct: 130 WEIFLEESYPYYLIVADEGLNHLQTLLFSFLVTQSW 165
Score = 37 (18.1 bits), Expect = 1.7e-19, Sum P(5) = 1.7e-19
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 1163 KDEVNTLKFQMSDEALQQMP-DFQGRIDVLKE 1193
K + T+KF S L+ +P DF D L E
Sbjct: 1495 KFQETTIKFYQSKVFLEDLPEDFN---DALHE 1523
>UNIPROTKB|E2QSY2 [details] [associations]
symbol:DDX60 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:1900246 "positive regulation of RIG-I
signaling pathway" evidence=IEA] [GO:1900245 "positive regulation
of MDA-5 signaling pathway" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003727
GO:GO:0051607 GO:GO:0003690 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 OMA:QDCTYAD
GO:GO:1900245 GO:GO:1900246 GeneTree:ENSGT00690000102154
EMBL:AAEX03010133 EMBL:AAEX03010134 EMBL:AAEX03010135
Ensembl:ENSCAFT00000014321 Uniprot:E2QSY2
Length = 1711
Score = 182 (69.1 bits), Expect = 1.7e-19, Sum P(5) = 1.7e-19
Identities = 54/176 (30%), Positives = 91/176 (51%)
Query: 709 DLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEM 768
+ T +++K+ F R+K + + +++L RRGI HH+ L K+++E+
Sbjct: 1222 ECTYANQKAIDAETLQMVFDRVKFTRKG----AELKALARRGIGYHHSSLSFKDKQLVEV 1277
Query: 769 LFCRGVVKVLFSTETFAMGVNAPARTVVF-DNLRKFDGREFRQLLPGEYTQMAGRAGRRG 827
LF +G ++V+ +T T A+G+N P ++VVF N D +RQ M+GRAGRRG
Sbjct: 1278 LFRKGFIRVVTATGTLALGINMPCKSVVFAQNSIYLDALNYRQ--------MSGRAGRRG 1329
Query: 828 LDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLLRVEELKVED 883
D +G V IP ++ +I + L QF L ++L L+ + K +D
Sbjct: 1330 QDLMGDVYFF---GIPLPK-IEKLIKSNVPELRGQFPLGITLVLRLMLLAS-KADD 1380
Score = 171 (65.3 bits), Expect = 1.7e-19, Sum P(5) = 1.7e-19
Identities = 52/174 (29%), Positives = 80/174 (45%)
Query: 402 DNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAV--YTAPIKTISNQK 459
D +Q+E + ++N +S + A TS+GKT + Y K V Y AP K + NQ
Sbjct: 764 DTWQRELLDVVDNNESAVIVAPTSSGKTYASYYCMEKVLKESNEGVVVYVAPTKALVNQV 823
Query: 460 YRDFSGKFDVGLLTGDV-------SLRPEA-SCLIMTT-----EILRSMLYRGADIIRDI 506
+F L G+ R +A +C ++ T EIL +R A + R I
Sbjct: 824 AATVHNRFTKSLPNGEALCGVFTRDYRHDALNCQVLITVPACFEILLLSPHRQAWVKR-I 882
Query: 507 EWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTK 560
+VIFDEVH + VWE +++M+ + LSAT+ N +W+ K
Sbjct: 883 RYVIFDEVHCLGGEIGAEVWEHLLVMI--RCPFLALSATISNPEHLTEWLQSVK 934
Score = 58 (25.5 bits), Expect = 8.6e-07, Sum P(4) = 8.6e-07
Identities = 39/164 (23%), Positives = 70/164 (42%)
Query: 791 PARTVVFDN---LRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVV-LCRDEI-PGE 845
P R + F + +RK D R++ + L E T + G ++ TV+ LC D + E
Sbjct: 1051 PERFIHFKDKIVIRKLDARKYEESLKAELTSWV-KNGHA--EEAKTVLKNLCPDSVFSSE 1107
Query: 846 SDLKH--IIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQ 903
+ + ++V ++E L ++ L + + L R A K E
Sbjct: 1108 NTVSMFPLLVEKLRKMEKLPALFFLFNLEDVERRAASLRYFLLRKQAMQRPPKADKEAHD 1167
Query: 904 LL-----MRKLAQPPKTIE--CIKGEPAIEEYYDMYYEAEKYNN 940
L+ +RK + KTI+ +K +++ + YEAE +NN
Sbjct: 1168 LINKIRKIRKSIERQKTIDERSLKNPRKMDQ--KLIYEAE-HNN 1208
Score = 49 (22.3 bits), Expect = 1.7e-19, Sum P(5) = 1.7e-19
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 670 VSIWLTLINKLSKKSLLPVVIFCFSKNHCDKLA 702
VS++ L+ KL K LP + F F+ ++ A
Sbjct: 1110 VSMFPLLVEKLRKMEKLPALFFLFNLEDVERRA 1142
Score = 43 (20.2 bits), Expect = 1.7e-19, Sum P(5) = 1.7e-19
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 220 WNVYKDQDQSSLKSTSDEKLNEL-SVQFDDLFKKAW 254
W ++ ++ +DE LN L ++ F L ++W
Sbjct: 130 WEIFLEESYPYYLIVADEGLNHLQTLLFSFLVTQSW 165
Score = 37 (18.1 bits), Expect = 1.7e-19, Sum P(5) = 1.7e-19
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 1163 KDEVNTLKFQMSDEALQQMP-DFQGRIDVLKE 1193
K + T+KF S L+ +P DF D L E
Sbjct: 1498 KFQETTIKFYQSKVFLEDLPEDFN---DALHE 1526
>UNIPROTKB|G4N3Z7 [details] [associations]
symbol:MGG_05900 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00278 SMART:SM00382 SMART:SM00490 GO:GO:0005524
EMBL:CM001233 GO:GO:0003677 GO:GO:0006281 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 KO:K15271 RefSeq:XP_003711726.1
ProteinModelPortal:G4N3Z7 EnsemblFungi:MGG_05900T0 GeneID:2684075
KEGG:mgr:MGG_05900 Uniprot:G4N3Z7
Length = 1508
Score = 183 (69.5 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 56/193 (29%), Positives = 98/193 (50%)
Query: 687 PVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVR--VQ 744
P+++FCF++ C+ A +S + ++ + +K K + G +N+ ++ +Q
Sbjct: 490 PIIVFCFTRKSCELTAKKLSQLWISMADDK--------KPWP---GPGQNM-KVTNDGLQ 537
Query: 745 SLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKF- 803
++++G+A HHAGL + +E + G + V+ T T ++GVN P TV+ F
Sbjct: 538 QVMQQGVAFHHAGLEQQDRLAVEKAYLEGKLHVICCTSTLSVGVNLPCHTVILKGTMGFQ 597
Query: 804 DGR--EFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATR-LE 860
DG+ E+ L E QM GRAGR D ++L R E + ++ + S T+ LE
Sbjct: 598 DGKLLEYSDL---EVVQMLGRAGRPQFDNSAVAIILTRSE----TKARYEAMASGTQVLE 650
Query: 861 SQFRLTYIMILHL 873
S L + +I HL
Sbjct: 651 ST--LHHNLIHHL 661
Score = 162 (62.1 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 53/158 (33%), Positives = 83/158 (52%)
Query: 445 RAVYTAPIKTISNQKYRDFSGKF-DVGL----LTGDV----SLRPEASCLIMTT-EILRS 494
+ +Y AP K + +++ RD+ KF + L LTGD R A+ +I+TT E L S
Sbjct: 303 KVIYVAPTKALCSERARDWESKFRHLNLTSAELTGDTFSTDMSRVRAAQIIVTTPEKLDS 362
Query: 495 MLYRGADI--IRD-IEWVIFDEVHYVNDIERGVVWEEVIIMLPR---HINIVLLSATVPN 548
+ R D + D ++ V+ DEVH++ D RG E +I + +I +V LSATVPN
Sbjct: 363 ITRRWEDYRKLLDLVQLVLIDEVHFLKDT-RGATLEVLICRMKTQVSNIRVVALSATVPN 421
Query: 549 TVEFADWIGRT-----KQKKIRVTGTTKRPVPLEHCLY 581
+ + A W+GR + ++ G RPV L+ +Y
Sbjct: 422 SEDVAKWLGRGNTDNHQPARLETFGEEFRPVRLQKHVY 459
Score = 128 (50.1 bits), Expect = 7.6e-16, Sum P(3) = 7.6e-16
Identities = 56/190 (29%), Positives = 93/190 (48%)
Query: 375 VSGSTEAIADRFHELVPD-LALDFPFELDN-FQKE--AIYYLENGDSVFVAAHTSAGKTV 430
++ I+ R +++PD L + FPFEL N Q + A Y N D+V V+A T +GKT
Sbjct: 228 IANGVHLISPR--DVLPDRLRVVFPFELFNAVQSKSFASVYKTN-DNVVVSAPTGSGKTA 284
Query: 431 VAEYAFALATKHCT----RAVYTAPIKTISNQKYRDFSGKF-DVGL----LTGDV----S 477
+ E A T + +Y AP K + +++ RD+ KF + L LTGD
Sbjct: 285 IFELAICKLLSQNTDQNFKVIYVAPTKALCSERARDWESKFRHLNLTSAELTGDTFSTDM 344
Query: 478 LRPEASCLIMTT-EILRSMLYRGADIIRDIEWVIFDEVHYVNDIE--RGVVWEEVIIMLP 534
R A+ +I+TT E L S+ R D + ++ V + V+ ++ RG E +I +
Sbjct: 345 SRVRAAQIIVTTPEKLDSITRRWEDYRKLLDLVQLVLIDEVHFLKDTRGATLEVLICRMK 404
Query: 535 RHINIVLLSA 544
++ + + A
Sbjct: 405 TQVSNIRVVA 414
Score = 39 (18.8 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 1319 LTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKM 1357
+ D+P G + I+ EF++ ALY+ +
Sbjct: 760 ILDMPTGTKIHDILMTLAKAEEFKDLRIKSNERALYRTL 798
Score = 37 (18.1 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 710 LTSSSEKSEIRVFC 723
+T+ S+K I VFC
Sbjct: 482 ITTHSQKKPIIVFC 495
>UNIPROTKB|Q5H9U9 [details] [associations]
symbol:DDX60L "Probable ATP-dependent RNA helicase
DDX60-like" species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 HOGENOM:HOG000169263 HOVERGEN:HBG107797
EMBL:AL832950 EMBL:CR933601 EMBL:AC079926 EMBL:AC093888
EMBL:AK055595 IPI:IPI00853133 IPI:IPI00935252 RefSeq:NP_001012985.1
UniGene:Hs.535011 ProteinModelPortal:Q5H9U9 STRING:Q5H9U9
PhosphoSite:Q5H9U9 DMDM:74755482 PaxDb:Q5H9U9 PRIDE:Q5H9U9
Ensembl:ENST00000260184 Ensembl:ENST00000505890
Ensembl:ENST00000511577 GeneID:91351 KEGG:hsa:91351 UCSC:uc003irq.4
CTD:91351 GeneCards:GC04M169277 HGNC:HGNC:26429 HPA:HPA043211
neXtProt:NX_Q5H9U9 PharmGKB:PA162383445 InParanoid:Q5H9U9
OMA:AQDSVYL GenomeRNAi:91351 NextBio:77184 ArrayExpress:Q5H9U9
Bgee:Q5H9U9 CleanEx:HS_DDX60L Genevestigator:Q5H9U9 Uniprot:Q5H9U9
Length = 1706
Score = 198 (74.8 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 47/132 (35%), Positives = 76/132 (57%)
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK 802
+++L +RGI HH+ + KE +E+LF +G+++V+ +TET A+G++ P ++VVF
Sbjct: 1237 LKALAQRGIGYHHSSMYFKEKEFVEILFVKGLIRVVTATETLALGIHMPCKSVVFAQ--- 1293
Query: 803 FDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQ 862
D L Y QM+GRAGRRG D +G V +IP +K ++ S L Q
Sbjct: 1294 -DSVYLDAL---NYRQMSGRAGRRGQDLLGNVYFF---DIPLPK-IKRLLASSVPELRGQ 1345
Query: 863 FRLTYIMILHLL 874
F L+ ++L L+
Sbjct: 1346 FPLSITLVLRLM 1357
Score = 128 (50.1 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 48/174 (27%), Positives = 78/174 (44%)
Query: 404 FQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAF--ALATKHCTRAVYTAPIK-------- 453
+Q+E + ++ +S + A TS+GKT + Y L VY AP K
Sbjct: 747 WQQELLDVVDKNESAVIVAPTSSGKTYASYYCMEKVLRESDVGVVVYVAPAKSLVGQVAA 806
Query: 454 TISNQKYRDF-SGKFDVGLLTGDVSLRPEASCLIMTT-----EILRSMLYRGADIIRDIE 507
T+ N+ + +G+ G T D +C ++ T EIL +R + R I
Sbjct: 807 TVENRFTKTLPAGRTLCGAFTRDYC-HNVLNCQVLITVPECFEILLLAPHRQKWVER-IR 864
Query: 508 WVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQ 561
+VIFDEVHY+ WE +++++ ++LSAT+ N W+ KQ
Sbjct: 865 YVIFDEVHYLGREVGAKFWELLLVII--RCPFLVLSATINNPNLLTKWLQSVKQ 916
Score = 48 (22.0 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 14/54 (25%), Positives = 22/54 (40%)
Query: 670 VSIWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFC 723
V ++ L+ KL + LP + F F + K A + L + KS C
Sbjct: 1091 VKMFPLLVEKLRQMDKLPAIFFLFKNDDVGKRAGSVCTF-LEKTETKSHPHTEC 1143
Score = 46 (21.3 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 637 REHPNRGKQNKHSVVGIKNSGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFS-- 694
+E N+ +QN + I+ + + G+R+ E + N + + +I CF
Sbjct: 577 KEDQNKAQQNDDLLFSIEEEMKNNLHSGIRKLEDYLTSCASNSVKFGVEMLGLIACFKAW 636
Query: 695 KNHC 698
K HC
Sbjct: 637 KKHC 640
>TAIR|locus:2125677 [details] [associations]
symbol:AT4G32700 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006260 "DNA replication"
evidence=IEA;IGI] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IGI]
[GO:0009640 "photomorphogenesis" evidence=IMP] [GO:0010468
"regulation of gene expression" evidence=IGI] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00476 PRINTS:PR00868
PROSITE:PS51194 SMART:SM00482 SMART:SM00490 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0006260
GO:GO:0009640 GO:GO:0006310 GO:GO:0010468 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003887 KO:K02349
OMA:EASIPEI EMBL:AB192295 IPI:IPI00570534 RefSeq:NP_001078482.1
UniGene:At.48069 ProteinModelPortal:Q588V7 SMR:Q588V7 STRING:Q588V7
PRIDE:Q588V7 EnsemblPlants:AT4G32700.2 GeneID:829406
KEGG:ath:AT4G32700 TAIR:At4g32700 HOGENOM:HOG000030860
PhylomeDB:Q588V7 ProtClustDB:CLSN2698843 Genevestigator:Q588V7
Uniprot:Q588V7
Length = 2154
Score = 228 (85.3 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 64/172 (37%), Positives = 94/172 (54%)
Query: 688 VVIFCFSKNHCDKLADGMS----GIDLTSSSEKSEIRVFCD--KAFSRLKGSDRNLPQIV 741
V+IFC S+ C+ A +S + + E SE F D A L+ S + ++
Sbjct: 772 VLIFCSSRKGCESTARHISKLIKNVPVNVDGENSE---FMDIRSAIDALRRSPSGVDPVL 828
Query: 742 RVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+ L G+A HHAGL +E++E + +G+V+VL +T T A GVN PAR V+F +
Sbjct: 829 --EETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTATSTLAAGVNLPARRVIFR--Q 884
Query: 802 KFDGREFRQLLPG-EYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHII 852
GR+F + G Y QM+GRAGR G+D G V++C+ PGE LK I+
Sbjct: 885 PMIGRDF---IDGTRYKQMSGRAGRTGIDTKGDSVLICK---PGE--LKRIM 928
Score = 75 (31.5 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 37/153 (24%), Positives = 67/153 (43%)
Query: 397 FPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTR-AVYTAPIKTI 455
+P++++ Q + + L+ + V+ A+ TSAGK+ VAE + A+ P +I
Sbjct: 516 YPWQVECLQVDGV--LQKRNLVYCAS-TSAGKSFVAEVLMLRRVIRTGKMALLVLPYVSI 572
Query: 456 SNQK--------------YRDFSGKFDVGLLTGDVSLRPEASCLI-MTTEILRSMLYRGA 500
+K R + G G L D S+ A C I ++ +L G
Sbjct: 573 CAEKAEHLEVLLEPLGKHVRSYYGNQGGGTLPKDTSV---AVCTIEKANSLINRLLEEGR 629
Query: 501 DIIRDIEWVIFDEVHYVNDIERGVVWEEVIIML 533
+ ++ ++ DE+H V D RG + E ++ L
Sbjct: 630 --LSELGIIVIDELHMVGDQHRGYLLELMLTKL 660
Score = 73 (30.8 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 534 PRH-INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGEFY-KVCE 591
P H + IV +SAT+PN ADW+ + + T RPVPLE + Y K E
Sbjct: 686 PAHGLQIVGMSATMPNVGAVADWL------QAALYQTEFRPVPLEEYIKVGSTIYNKKME 739
Query: 592 NEAFIPQ 598
IP+
Sbjct: 740 VVRTIPK 746
Score = 44 (20.5 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 20/91 (21%), Positives = 40/91 (43%)
Query: 1 MNRIQATNELAFRVGFSGHSGHLRVEPLYTVEDRTDPIKSLPDFILPPAFPRE--TAESI 58
+ R +++ LA + S H E + +++D T+P+ S P+ + R+ ++
Sbjct: 172 LKRRSSSSSLAQDIQIS-HKRRCESENIPSLDDLTNPLGSKPESLARNGNNRDKPVSDPT 230
Query: 59 KE--HIEDKYLSMGLDTNEFSPEKVGRQWDF 87
K+ E + MGL +PE +F
Sbjct: 231 KKMPSNESVEIPMGLRKCSKAPESSAHLTEF 261
Score = 43 (20.2 bits), Expect = 7.1e-12, Sum P(3) = 7.1e-12
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 140 SGPLPRVAGPAKDFVRGSINSRPFRPGGLED 170
S +P V G D+++ ++ FRP LE+
Sbjct: 696 SATMPNV-GAVADWLQAALYQTEFRPVPLEE 725
>UNIPROTKB|G4MUH1 [details] [associations]
symbol:MGG_07250 "DEAD/DEAH box helicase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM001232
GO:GO:0008026 RefSeq:XP_003715470.1 EnsemblFungi:MGG_07250T0
GeneID:2682996 KEGG:mgr:MGG_07250 Uniprot:G4MUH1
Length = 1771
Score = 188 (71.2 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 48/128 (37%), Positives = 69/128 (53%)
Query: 747 LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGR 806
LRRG+ +HHAG+ ++V+EML RG + V+ +T T A+G+N P +TVVF +
Sbjct: 1213 LRRGVGVHHAGMNRKYRQVVEMLCRRGFLTVVIATGTLALGINVPCKTVVFS-----EDS 1267
Query: 807 EFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLT 866
F L Y Q +GRAGRRG D +G VV IP + I+ L QF ++
Sbjct: 1268 VFLSAL--NYRQASGRAGRRGFDLLGNVVF----NIPTHRSFE-IMSSRLPDLRGQFPVS 1320
Query: 867 YIMILHLL 874
++L L
Sbjct: 1321 TTIVLRTL 1328
Score = 141 (54.7 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 38/136 (27%), Positives = 65/136 (47%)
Query: 436 FALATKHCTRAVYTAPIKTISNQKYRDFSGKFDVGLLTGDVSLRPEASCLIMTT--EILR 493
+ TK + A ++ +K+R + + T D + C I+ T IL+
Sbjct: 764 YVAPTKALVNQI-AAEVQGRFKKKFRYEESRSVWAIHTRDYRVNNPTGCQILVTVPHILQ 822
Query: 494 SMLYRGADIIRDIEW------VIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVP 547
ML ++ + W +IFDEVH + + GVVWE+++++ P I+ LSATV
Sbjct: 823 IMLLSPPNVEKANSWAHRIKRIIFDEVHCIGQAQEGVVWEQLLLLAP--CPIIALSATVG 880
Query: 548 NTVEFADWIGRTKQKK 563
N EF W+ +++ K
Sbjct: 881 NPQEFVAWLSESQKTK 896
Score = 88 (36.0 bits), Expect = 5.7e-13, Sum P(3) = 5.7e-13
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 399 FELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTR--AVYTAPIKTIS 456
F D +Q++ + ++ S+ V A TSAGKT ++ YA + VY AP K +
Sbjct: 713 FNPDAWQRKVLDAIDAKKSLCVIAPTSAGKTFISFYAMKKVMQSSDNDVLVYVAPTKALV 772
Query: 457 NQKYRDFSGKF 467
NQ + G+F
Sbjct: 773 NQIAAEVQGRF 783
Score = 71 (30.1 bits), Expect = 3.3e-10, Sum P(4) = 3.3e-10
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 183 SNGEWVQEILKGGPAQVVPPSFKQGLDLGELQAYPCL-WNVYKDQDQSSLKSTSDE-KLN 240
+NG+ +Q K Q+ P F+ LDL + Q P + +N + + +S +KS E K +
Sbjct: 1047 NNGD-MQTRNKRKGEQLSPEHFQLLLDLHQRQGLPAIIFNYDRMKCESIMKSVISELKRH 1105
Query: 241 ELSVQFDDLFKKAWEEDVAEFEKDDWLPNRIKI 273
EL + K W++ + ++EK W+ + KI
Sbjct: 1106 ELEWKKTS---KEWQKTIKDYEK--WVKAQEKI 1133
Score = 48 (22.0 bits), Expect = 5.7e-13, Sum P(3) = 5.7e-13
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 501 DIIRDIEWVIFDEVHYVNDIERGV 524
++IR + WV D V ++ + RGV
Sbjct: 1195 ELIRSLNWVNLDPV-FIEALRRGV 1217
Score = 40 (19.1 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKL 701
L+ L ++ LP +IF + + C+ +
Sbjct: 1069 LLLDLHQRQGLPAIIFNYDRMKCESI 1094
Score = 38 (18.4 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 558 RTKQKKIRVTGTTKRPVPLEHCLYYSGEFYKVCENEAFIPQGWKAAKDAYKRKNL 612
+T ++ R G +EH L + G + + F P+ DA++RK L
Sbjct: 669 QTSTERARSQGLYHGATSIEHQLEFYGPDMERGFDPKFDPRVSSFNPDAWQRKVL 723
Score = 37 (18.1 bits), Expect = 3.3e-10, Sum P(4) = 3.3e-10
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 29 YTVEDRTDPIKSLPDFI 45
+ V D+ DP ++LP +
Sbjct: 993 FPVADKLDPSQALPAIV 1009
>ZFIN|ZDB-GENE-061207-43 [details] [associations]
symbol:hfm1 "HFM1, ATP-dependent DNA helicase
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-061207-43 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 GO:GO:0008026
GeneTree:ENSGT00550000074822 EMBL:BX927353 EMBL:CABZ01046504
IPI:IPI00897259 ProteinModelPortal:F1QWJ0
Ensembl:ENSDART00000099851 Bgee:F1QWJ0 Uniprot:F1QWJ0
Length = 1049
Score = 158 (60.7 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 36/100 (36%), Positives = 52/100 (52%)
Query: 742 RVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+++ L GI HHAG+ +++ E F G + VLF+T T AMGVN PA VV +
Sbjct: 304 KLRDLFVYGIGYHHAGMDVSDRKITENAFTVGDLPVLFTTSTLAMGVNMPAHLVVIKSTM 363
Query: 802 KFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDE 841
+ G + + QM GRAGR D T V++ R +
Sbjct: 364 HYVGGACEEYSEADLLQMIGRAGRPQFDTTATAVIMTRPQ 403
Score = 150 (57.9 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 54/154 (35%), Positives = 77/154 (50%)
Query: 396 DFPFELDNFQKEAIYYLENGDSVFVA-AHTSAGKTVVAEYAFAL----ATK--HCTRAVY 448
DFP+ + Q +A+ + + FVA A T +GKTV+ E A A++ H RAVY
Sbjct: 8 DFPY-FNYVQSQALDDVLYSNKNFVACAPTGSGKTVLFELAIVRLLIEASEPWHNVRAVY 66
Query: 449 TAPIKTISNQKYRDFSGKFD-VGL----LTGDVSLRP-----EASCLIMTTEILRSMLYR 498
APIK + +Q+Y ++ KF +GL LTGD + +A + T E SM R
Sbjct: 67 MAPIKALCSQQYDNWKQKFGPLGLKCKELTGDTEIDDFFEIQDAHLIFTTAEKWDSMTRR 126
Query: 499 GAD--IIRDIEWVIFDEVHYVNDIERGVVWEEVI 530
D ++ I + DEVH V D RG E V+
Sbjct: 127 WKDNCLLTSIRLFLVDEVHVVKDKTRGATLEVVV 160
Score = 78 (32.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 29/92 (31%), Positives = 41/92 (44%)
Query: 481 EASCLIMTTEILRSMLYRGAD--IIRDIEWVIFDEVHYVNDIERGVVWEEVII-MLPRH- 536
+A + T E SM R D ++ I + DEVH V D RG E V+ M H
Sbjct: 109 DAHLIFTTAEKWDSMTRRWKDNCLLTSIRLFLVDEVHVVKDKTRGATLEVVVSRMKTMHF 168
Query: 537 ----IN--------IVLLSATVPNTVEFADWI 556
IN V +SAT+PN + ++W+
Sbjct: 169 YRQAINPESKASVRFVAVSATIPNIQDVSEWL 200
Score = 37 (18.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 533 LPRHINIVLLSATVPNTVEFADWIGRT 559
L H+N ++ T+ + DWI T
Sbjct: 426 LVEHLNAEIVLHTISDVNMALDWIRST 452
>DICTYBASE|DDB_G0278827 [details] [associations]
symbol:DDB_G0278827 "Probable ATP-dependent RNA
helicase DDX60" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0278827 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
EMBL:AAFI02000024 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG4581 RefSeq:XP_641993.1
ProteinModelPortal:Q54XN7 EnsemblProtists:DDB0206223 GeneID:8621725
KEGG:ddi:DDB_G0278827 InParanoid:Q54XN7 OMA:RESALIC Uniprot:Q54XN7
Length = 1816
Score = 153 (58.9 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 54/165 (32%), Positives = 77/165 (46%)
Query: 678 NKLSKKSLLPVVIFCFSKNHCDKLAD----GMSGIDLTSSSEKSEIRVFCDKAFSRLKGS 733
N + +K L +VI F K+ LAD ++L K + F L S
Sbjct: 1191 NIIEEKKQLDLVIERFQKSLGRALADLEPNDPEKMELERLKAKRASLDYLKPQFGNLLSS 1250
Query: 734 DRNLPQIVRVQSL---LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNA 790
D + + V+ L L +GIA HH G +E LF ++V+F+T T A+GVNA
Sbjct: 1251 D--IDEKVKKDPLAPALTQGIAAHHGGCDKNYLRNVEYLFRSKKIQVVFATSTLAVGVNA 1308
Query: 791 PARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVV 835
PA++ VF + +L + Q AGRAGRRG D G V+
Sbjct: 1309 PAKSSVF-----LGDSPYLNVLTSK--QCAGRAGRRGFDNYGNVI 1346
Score = 104 (41.7 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 55/241 (22%), Positives = 104/241 (43%)
Query: 236 DEKLNELSVQFDDLFKKAWEEDVAEFEKDDWLPNRIKIMLYWRLHPFGNMQHKLKRKKVL 295
D +N L Q +DL ++ + E ++ I++ Y +++ +K K
Sbjct: 658 DHLINFLVKQKEDLIEEKKRTILLERKQQSKTKTHIELSEYEEKEIETSLELGIKEKSQF 717
Query: 296 FACGFLVYNYFSSY---QSCYLGPQLEPESIDSDAEGKTTVGFNSVKEADLS-VLDEILS 351
+ ++ Y S+ +S L +L+ ID A T+ + + +DLS +++
Sbjct: 718 YQ---MIQKYLRSFITEKSKILSTKLQ---IDF-ANRFYTISKSLIGLSDLSNFINDHWK 770
Query: 352 VKSGGTTSILDDGGGQQQKEA--WVVSGSTEAIADRFHELVPDLALDFPFELDNFQKEAI 409
+K D G QQ K + + + S + + R V D + F+ D +Q E +
Sbjct: 771 LKLPKLDE--SDVGNQQLKNSIEFQLKHSPDTLI-RNTGSVEDSRVRH-FKPDAWQVELL 826
Query: 410 YYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRA--VYTAPIKTISNQKYRDFSGKF 467
++ +S + A TS+GKT ++ Y F K V+ P K + NQ Y + G++
Sbjct: 827 DIVDKRESALICASTSSGKTFISFYCFEQILKESNDGIVVFVCPTKALVNQMYAEVLGRY 886
Query: 468 D 468
D
Sbjct: 887 D 887
Score = 102 (41.0 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 469 VGLLTGDVSLRPEASCLIMTTEILRSMLY---RGADIIRDIEWVIFDEVHYVNDIERGVV 525
VG+ T D L E +++T +L+ I+ ++IFDEVH + G +
Sbjct: 903 VGVFTRDFRLNIETCQILITVPQCLEILFLSIMNTHFIQRCRYIIFDEVHQIASSVDGAI 962
Query: 526 WEEVIIMLPRHINIVLLSATVPNTVEFADWI 556
WE +++ P + LSAT+ N +F +++
Sbjct: 963 WERLLVFNPAPF--LALSATLGNLTDFHNFL 991
Score = 63 (27.2 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 636 KREHPNRGKQNKHSVVGIKNSGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSK 695
K+ + N + +V +K + N L+ S ++ +L K+ LLP + F F++
Sbjct: 1111 KQFYTNLPSMTEKQLV-VKALTSPKYNDSLKFDWASEITNIVLELQKQDLLPALFFSFNR 1169
Query: 696 NHCDKLADGMSGIDLTSSSEKSEI 719
+ C +LA + D+T + I
Sbjct: 1170 SLCSRLAQRVYN-DITHRNTNPNI 1192
Score = 51 (23.0 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 235 SDEK--LNELSVQFDDLFKKAWEEDVAEFEKDDWLPNRIKIML 275
+D+K LN +VQF L K W ED + E L N ML
Sbjct: 119 NDKKNVLNNSNVQFT-LIKSKWWEDFSSIESY-LLENMFSFML 159
Score = 41 (19.5 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 39 KSLPDFILPPAFPRETAESIKEHIED 64
KS P + + P P T + K + D
Sbjct: 1026 KSFPTYTIEPLHPMATLDQKKTGLSD 1051
>CGD|CAL0001532 [details] [associations]
symbol:orf19.3098 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000388 "spliceosome conformational change to
release U4 (or U4atac) and U1 (or U11)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001532 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 KO:K12854 GO:GO:0008026 EMBL:AACQ01000086
EMBL:AACQ01000085 RefSeq:XP_715407.1 RefSeq:XP_715477.1
ProteinModelPortal:Q5A0Z8 STRING:Q5A0Z8 GeneID:3642881
GeneID:3642903 KEGG:cal:CaO19.10610 KEGG:cal:CaO19.3098
Uniprot:Q5A0Z8
Length = 1987
Score = 185 (70.2 bits), Expect = 2.9e-16, Sum P(3) = 2.9e-16
Identities = 41/104 (39%), Positives = 61/104 (58%)
Query: 742 RVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+++ ++ RG IHHAGL + V+E LF +G ++VL ST T A GVN PA TV+
Sbjct: 658 KLKEVIPRGFGIHHAGLTKKDRGVVEDLFAQGYLRVLVSTATLAWGVNLPAHTVIIKGTE 717
Query: 802 KF--DGREFRQLLPGEYTQMAGRAGRRGLDKIGT-VVVLCRDEI 842
+ + + QL P + QM GRAGR DK G +++ +DE+
Sbjct: 718 TYSPESGAWVQLSPQDILQMLGRAGRPRYDKNGEGIIITSQDEV 761
Score = 135 (52.6 bits), Expect = 2.9e-16, Sum P(3) = 2.9e-16
Identities = 46/150 (30%), Positives = 73/150 (48%)
Query: 445 RAVYTAPIKTISNQKYRDFSGKFD------VGLLTGDVSLRP----EASCLIMTTEILRS 494
+ VY AP+K + ++ R+F + V LTGD SL E ++ T E
Sbjct: 429 KIVYIAPLKALVQEQMREFQRRLTSVYGVVVNELTGDSSLSKQQIAETQIIVTTPEKWDI 488
Query: 495 MLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRH-------INIVLLSATVP 547
+ + ++ ++ +I DE+H ++D ERG V E ++ R I IV LSAT+P
Sbjct: 489 ITRKDPSYVKLVKLMIIDEIHLLHD-ERGPVLESLVSRAIRKSETTGSDIRIVGLSATLP 547
Query: 548 NTVEFADWIGRTKQKKIRVTGTTKRPVPLE 577
N + A +I R K + + + RP PLE
Sbjct: 548 NYADVAKFI-RAKPEGLFYFDASYRPCPLE 576
Score = 79 (32.9 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFST-ETFAMGVNAPARTVVF-DNL 800
+++LL +GIA+ ++G+ + + ++E LF + VLF T +T AP VF
Sbjct: 1475 LKNLLPKGIAVFYSGMARVDRLIVERLFESKSIGVLFCTMDTSKF---APTANNVFVAGT 1531
Query: 801 RKFDGREFRQL 811
R +DG E R L
Sbjct: 1532 RVYDGHEHRFL 1542
Score = 69 (29.3 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 48/179 (26%), Positives = 78/179 (43%)
Query: 346 LDEIL---SVKSGGTTSILDDGGGQQQKEAW---VVSGSTEAIADRFHEL----VPDLAL 395
LD I+ SV++ T L +G + K+++ V ++++D L +PD A
Sbjct: 306 LDRIVFSTSVENARVT--LPEGTIHEVKKSYDTITVPAPAQSLSDNDELLPISTLPDWAQ 363
Query: 396 D-FP-FELDNFQK--EAIYY--LENGDSVFVAAHTSAGKTVVAEYAFALATK------HC 443
+ FP E F + IY E +++ + A T AGKT VA + H
Sbjct: 364 EAFPKTETTTFNRIQSKIYNQAFETDNNLLICAPTGAGKTNVAMLTILRTIENFRNNGHI 423
Query: 444 T----RAVYTAPIKTISNQKYRDFSGKFD------VGLLTGDVSLRPEASCLIMTTEIL 492
+ VY AP+K + ++ R+F + V LTGD SL + I T+I+
Sbjct: 424 QLKNFKIVYIAPLKALVQEQMREFQRRLTSVYGVVVNELTGDSSLSKQQ---IAETQII 479
Score = 42 (19.8 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 365 GGQQQKEAWVVSGSTEAIADRFHELVPD 392
G ++QK ++ EA DR H+ + D
Sbjct: 581 GVKEQKAIKRIAAMNEACYDRMHQSLQD 608
Score = 38 (18.4 bits), Expect = 2.9e-16, Sum P(3) = 2.9e-16
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 1353 LYKKMETASNAIKRDIVFAASLYI 1376
+YK + ++ ++ ++FA S YI
Sbjct: 1415 IYKDLAKVNSGLRNTLIFAPS-YI 1437
>UNIPROTKB|F1NMU1 [details] [associations]
symbol:POLQ "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0006281 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 GO:GO:0003887 GO:GO:0043142 EMBL:AADN02037908
IPI:IPI00584654 Ensembl:ENSGALT00000024072 Uniprot:F1NMU1
Length = 904
Score = 205 (77.2 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 58/162 (35%), Positives = 86/162 (53%)
Query: 688 VVIFCFSKNHCDKLADGMSG--IDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVR--- 742
V++FC SKN C+KLAD ++ L + + S +G D L Q+ R
Sbjct: 305 VLLFCPSKNWCEKLADIIAREFYSLQQAEKGSAKNSSLSPVVVDREGIDEVLDQLRRSLS 364
Query: 743 -VQSLLRR----GIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVF 797
+ S+L+R G+A HHAGL +++IE F + ++VL +T T + GVN PAR V+
Sbjct: 365 GLDSVLQRTLPWGVAFHHAGLTFDERDIIEGAFRQSTIRVLAATSTLSSGVNLPARRVII 424
Query: 798 DNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCR 839
F G L Y QMAGRAGR+G+D G +++C+
Sbjct: 425 -RTPMFGGTLLDVLT---YKQMAGRAGRKGVDTEGESILVCK 462
Score = 87 (35.7 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 43/174 (24%), Positives = 80/174 (45%)
Query: 377 GSTEAIADRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAF 436
G +A+ +++H L + F ++ + + LE G ++ +A TSAGKT+VAE
Sbjct: 40 GLPKAVLEKYHSL--GVVQMFEWQAECLMLGQV--LE-GKNLVYSAPTSAGKTLVAELLI 94
Query: 437 ---ALATKHCTRAVYTAPIKTISNQKYRDFSGKFD-----VGLLTGDVSLRPEASCL--- 485
L T+ +A++ P +++ +K F VG G +S S L
Sbjct: 95 LKRVLETRK--KALFILPFVSVAKEKKCYLQALFQEVDMRVGGYMGSISPAGRFSLLDVA 152
Query: 486 IMTTEILRSMLYR--GADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHI 537
+ T E ++ R + + + V+ DE+H + D RG + E +++ R+I
Sbjct: 153 VCTIEKANGLINRLIEENQMDSLGVVVVDELHMLGDSHRGYLLE-LLLTKVRYI 205
Score = 53 (23.7 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 537 INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGEFY 587
I +V +SAT+PN A W+ + T RPVPL+ + Y
Sbjct: 224 IQVVGMSATLPNLGLLASWLDA------ELYCTDFRPVPLKEWVKIGNNIY 268
>UNIPROTKB|A2PYH4 [details] [associations]
symbol:HFM1 "Probable ATP-dependent DNA helicase HFM1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 eggNOG:COG1204 GO:GO:0008026 KO:K15271
EMBL:AB204867 EMBL:AK094079 EMBL:BX323048 EMBL:AC098691
IPI:IPI00374013 IPI:IPI00852603 RefSeq:NP_001017975.3
UniGene:Hs.454818 ProteinModelPortal:A2PYH4 SMR:A2PYH4
STRING:A2PYH4 PhosphoSite:A2PYH4 PaxDb:A2PYH4 PRIDE:A2PYH4
Ensembl:ENST00000294696 Ensembl:ENST00000370425 GeneID:164045
KEGG:hsa:164045 UCSC:uc001doa.4 CTD:164045 GeneCards:GC01M091726
HGNC:HGNC:20193 HPA:HPA035557 neXtProt:NX_A2PYH4
PharmGKB:PA142671690 HOGENOM:HOG000293238 HOVERGEN:HBG103774
InParanoid:A2PYH4 OMA:EADEMKS OrthoDB:EOG44XJHC ChiTaRS:HFM1
GenomeRNAi:164045 NextBio:88429 ArrayExpress:A2PYH4 Bgee:A2PYH4
CleanEx:HS_HFM1 Genevestigator:A2PYH4 Uniprot:A2PYH4
Length = 1435
Score = 172 (65.6 bits), Expect = 4.3e-16, Sum P(3) = 4.3e-16
Identities = 38/98 (38%), Positives = 55/98 (56%)
Query: 742 RVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+++ +L+ G A HHAG+ ++V+E F G + VLF+T T AMGVN PA VV +
Sbjct: 574 KLRDILKDGAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTM 633
Query: 802 KFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCR 839
+ G F + + QM GRAGR D T V++ R
Sbjct: 634 HYAGGLFEEYSETDILQMIGRAGRPQFDTTATAVIMTR 671
Score = 136 (52.9 bits), Expect = 4.3e-16, Sum P(3) = 4.3e-16
Identities = 56/173 (32%), Positives = 82/173 (47%)
Query: 396 DFPFELDNFQKEAIYYLENGDSVFV-AAHTSAGKTVVAEYAFALATKHCT------RAVY 448
+FP+ + Q +A L D FV A T +GKTVV E A + VY
Sbjct: 277 EFPY-FNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLMEVPLPWLNIKIVY 335
Query: 449 TAPIKTISNQKYRDFSGKFD-VGL----LTGDVSLRP----EASCLIMTT-EILRSML-- 496
APIK + +Q++ D+ KF +GL LTGD + + + +IMTT E SM
Sbjct: 336 MAPIKALCSQRFDDWKEKFGPIGLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRK 395
Query: 497 YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNT 549
+R +++ + + DEVH V D RG E V+ R + +S T+ NT
Sbjct: 396 WRDNSLVQLVRLFLIDEVHIVKDENRGPTLEVVV---SRMKTVQSVSQTLKNT 445
Score = 71 (30.1 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 23/97 (23%), Positives = 43/97 (44%)
Query: 497 YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPR---------------HINIVL 541
+R +++ + + DEVH V D RG E V+ + + V
Sbjct: 396 WRDNSLVQLVRLFLIDEVHIVKDENRGPTLEVVVSRMKTVQSVSQTLKNTSTAIPMRFVA 455
Query: 542 LSATVPNTVEFADWIGRTKQKKIRVT-GTTKRPVPLE 577
+SAT+PN + A+W+ ++ + + + RPV L+
Sbjct: 456 VSATIPNAEDIAEWLSDGERPAVCLKMDESHRPVKLQ 492
Score = 57 (25.1 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 1062 DKKELLCICNCKIKIDQVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKD 1121
D+K L C + + Q + V A F TV+Q K +KY + V+D KL+D
Sbjct: 526 DQKPTLVFCATRKGVQQAASVL-VKDAKFIMTVEQ----KQRLQKYAYS---VRDSKLRD 577
Query: 1122 MNLVEAYYKWAGL 1134
+ A Y AG+
Sbjct: 578 ILKDGAAYHHAGM 590
Score = 44 (20.5 bits), Expect = 4.3e-16, Sum P(3) = 4.3e-16
Identities = 24/97 (24%), Positives = 43/97 (44%)
Query: 1032 VSHRKGSGVINIKLPYHGAAAGV---SYEVRGIDKKELLC--ICNCKIKIDQVGLLEDVS 1086
+SH K S + I P G A + E + K + C C CKI + Q +++ +
Sbjct: 1114 ISHSKHSDISTIAGPNKGTTASKKPGNRECNHLCKSKHTCGHDC-CKIGVAQKSEIKEST 1172
Query: 1087 SAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMN 1123
+++ ++ + S + PVK LK++ MN
Sbjct: 1173 ISSYLSDLRNRNAVSS--------VPPVKRLKIQ-MN 1200
Score = 40 (19.1 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 1130 KWAGLLRKMAANKCHGCIKLEEHMKLTKE 1158
K+A LL + KC C E + ++K+
Sbjct: 905 KFAVLLNSLILAKCFRCKLWENSLHVSKQ 933
>UNIPROTKB|F1MFR1 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:DAAA02007913 EMBL:DAAA02007914
EMBL:DAAA02007915 EMBL:DAAA02007916 IPI:IPI00839892
Ensembl:ENSBTAT00000027789 Uniprot:F1MFR1
Length = 1438
Score = 174 (66.3 bits), Expect = 5.4e-16, Sum P(3) = 5.4e-16
Identities = 40/99 (40%), Positives = 55/99 (55%)
Query: 741 VRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNL 800
+RV L+ G+A HHAG+ ++V+E F G + VLF+T T AMGVN PA VV +
Sbjct: 577 LRVDILIH-GVAYHHAGMELSDRKVVEGAFTVGDIPVLFTTSTLAMGVNLPAHLVVIKST 635
Query: 801 RKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCR 839
+ G F + + QM GRAGR D T V++ R
Sbjct: 636 MHYAGGMFEEYSETDILQMIGRAGRPQFDTTATAVIMTR 674
Score = 140 (54.3 bits), Expect = 5.4e-16, Sum P(3) = 5.4e-16
Identities = 57/173 (32%), Positives = 81/173 (46%)
Query: 396 DFPFELDNFQKEAIYYLENGDSVFV-AAHTSAGKTVVAEYAFALATKHCT------RAVY 448
+FP+ + Q +A L D FV A T +GKTVV E A + VY
Sbjct: 279 EFPY-FNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLMEVPLPWSNIKIVY 337
Query: 449 TAPIKTISNQKYRDFSGKFD-VGL----LTGDVSLRP----EASCLIMTT-EILRSML-- 496
APIK + +Q++ D+ KF +GL LTGD + + + +IMTT E SM
Sbjct: 338 MAPIKALCSQRFDDWKKKFGPIGLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRK 397
Query: 497 YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNT 549
+R ++ + + DEVH V D RG E V+ R + +LS V NT
Sbjct: 398 WRDNSLVHLVRLFLIDEVHVVKDENRGPTLEVVV---SRMKTVQILSPAVENT 447
Score = 75 (31.5 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 26/96 (27%), Positives = 43/96 (44%)
Query: 497 YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVI-------IMLPRHIN--------IVL 541
+R ++ + + DEVH V D RG E V+ I+ P N V
Sbjct: 398 WRDNSLVHLVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQILSPAVENTNSIIPMRFVA 457
Query: 542 LSATVPNTVEFADWIGRTKQKKIRVTGTTK-RPVPL 576
+SAT+PN + A+W+ ++ + + + RPV L
Sbjct: 458 VSATIPNAEDIAEWLSDGERSAVCLKMDERHRPVKL 493
Score = 43 (20.2 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 675 TLINKLSKKSLLPVVIFCFSKNHCDKLAD 703
T K+S S + CF +N C K D
Sbjct: 1386 TRSEKISNSSNFNEKVDCFIRNECKKEID 1414
Score = 37 (18.1 bits), Expect = 5.4e-16, Sum P(3) = 5.4e-16
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 1123 NLVEAYYKWAGLLRKMAANKCHGCIKLEEH 1152
+ V K+A LL + KC C KL E+
Sbjct: 900 DFVATQEKFAVLLNSLILAKCFRC-KLWEN 928
>RGD|1584010 [details] [associations]
symbol:Hfm1 "HFM1, ATP-dependent DNA helicase homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1584010 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0008026
GeneTree:ENSGT00550000074822 IPI:IPI00766186
Ensembl:ENSRNOT00000033794 UCSC:RGD:1584010 Uniprot:F1LWY1
Length = 954
Score = 172 (65.6 bits), Expect = 8.2e-16, Sum P(3) = 8.2e-16
Identities = 37/98 (37%), Positives = 54/98 (55%)
Query: 742 RVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+++ L G+ HHAG+ ++++E LF G + VLF+T T AMGVN PA VV +
Sbjct: 304 KLKDTLVYGVGYHHAGMELSDRKLVEELFTSGDLPVLFTTSTLAMGVNLPAHLVVIKSTM 363
Query: 802 KFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCR 839
+ G F + + QM GRAGR D T V++ R
Sbjct: 364 HYTGGAFEEYSETDILQMIGRAGRPQFDTTATAVIMTR 401
Score = 134 (52.2 bits), Expect = 8.2e-16, Sum P(3) = 8.2e-16
Identities = 56/172 (32%), Positives = 80/172 (46%)
Query: 396 DFPFELDNFQKEAIYYLENGDSVFV-AAHTSAGKTVVAEYAFALATKHCT------RAVY 448
+FP+ + Q +A L D FV A T +GKTVV E A + VY
Sbjct: 8 EFPY-FNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLMEAPLPWLNMKVVY 66
Query: 449 TAPIKTISNQKYRDFSGKFD-VGL----LTGDVSLRP----EASCLIMTT-EILRSML-- 496
APIK + +Q++ D+ KF +GL LTGD + + + +IMTT E SM
Sbjct: 67 MAPIKALCSQRFDDWKEKFGPIGLTCKELTGDTVMDDLFEIQHANIIMTTPEKWDSMTRK 126
Query: 497 YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPN 548
+R I+ + + DEVH + D RG E V+ R + LS T+ N
Sbjct: 127 WRDNSFIQLVRLFLIDEVHVIKDENRGPTLEVVV---SRMKTVQSLSKTLEN 175
Score = 86 (35.3 bits), Expect = 6.2e-11, Sum P(3) = 6.2e-11
Identities = 29/113 (25%), Positives = 51/113 (45%)
Query: 482 ASCLIMTTEILRSML--YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIML------ 533
A+ ++ T E SM +R I+ + + DEVH + D RG E V+ +
Sbjct: 110 ANIIMTTPEKWDSMTRKWRDNSFIQLVRLFLIDEVHVIKDENRGPTLEVVVSRMKTVQSL 169
Query: 534 --------PRHINIVLLSATVPNTVEFADWIGRTKQKKIRVT-GTTKRPVPLE 577
P + V +SAT+PN + A+W+ ++ + + + RPV L+
Sbjct: 170 SKTLENASPAPVRFVAVSATIPNAEDIAEWLSDGERPAVCLKMDESHRPVKLQ 222
Score = 37 (18.1 bits), Expect = 8.2e-16, Sum P(3) = 8.2e-16
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 1130 KWAGLLRKMAANKCHGCIKLEEHMKLTKE 1158
K+A LL + KC C E ++K+
Sbjct: 635 KFAVLLNSVILAKCFKCKLWENSQHVSKQ 663
>UNIPROTKB|F1S4E9 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:CU179709
Ensembl:ENSSSCT00000007570 Uniprot:F1S4E9
Length = 1438
Score = 176 (67.0 bits), Expect = 8.6e-16, Sum P(3) = 8.6e-16
Identities = 39/98 (39%), Positives = 55/98 (56%)
Query: 742 RVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+++ LL G+A HHAG+ ++V+E F G + VLF+T T AMGVN PA VV +
Sbjct: 576 KLRDLLIHGVAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTM 635
Query: 802 KFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCR 839
+ G F + + QM GRAGR D T V++ R
Sbjct: 636 HYAGGMFEEYSETDILQMIGRAGRPQFDTTATAVIMTR 673
Score = 132 (51.5 bits), Expect = 8.6e-16, Sum P(3) = 8.6e-16
Identities = 55/172 (31%), Positives = 81/172 (47%)
Query: 396 DFPFELDNFQKEAIYYLENGD-SVFVAAHTSAGKTVVAEYAFALATKHCT------RAVY 448
+FP+ + Q +A L D +V V A T +GKTV+ E A + VY
Sbjct: 279 EFPY-FNYIQSKAFDDLLYTDRNVVVCAPTGSGKTVMFELAITRLLMEVPLPWSNIKIVY 337
Query: 449 TAPIKTISNQKYRDFSGKFD-VGL----LTGDVSLRP----EASCLIMTT-EILRSML-- 496
APIK + +Q++ D+ KF +GL LTGD + + + +IMTT E SM
Sbjct: 338 MAPIKALCSQRFDDWKEKFGPIGLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRK 397
Query: 497 YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPN 548
+R +++ + + DEVH V D RG E V+ R + LS V N
Sbjct: 398 WRDNSLVQLVRLFLIDEVHVVKDENRGPTLEVVV---SRMKTVQFLSHAVEN 446
Score = 86 (35.3 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 28/96 (29%), Positives = 45/96 (46%)
Query: 497 YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIML------------PRHI---NIVL 541
+R +++ + + DEVH V D RG E V+ + PR+I V
Sbjct: 398 WRDNSLVQLVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQFLSHAVENPRNIIPMRFVA 457
Query: 542 LSATVPNTVEFADWIGRTKQKKIRVTGTTK-RPVPL 576
+SAT+PN + A+W+ ++ I + K RPV L
Sbjct: 458 VSATIPNAEDIAEWLSDGERSAICLKMDEKHRPVKL 493
Score = 50 (22.7 bits), Expect = 0.00091, Sum P(2) = 0.00090
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 1062 DKKELLCICNCKIKIDQVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKD 1121
D+K L C + + Q + V A F TV+Q +++ + ++D KL+D
Sbjct: 528 DQKPTLVFCATRKGVQQAASIL-VKDAKFIMTVEQ-------KQRLHKCAYSIRDSKLRD 579
Query: 1122 MNLVEAYYKWAGL 1134
+ + Y AG+
Sbjct: 580 LLIHGVAYHHAGM 592
Score = 41 (19.5 bits), Expect = 8.6e-16, Sum P(3) = 8.6e-16
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 1123 NLVEAYYKWAGLLRKMAANKCHGCIKLEEHMKLTKE 1158
+ V K+A LL + KC C E + ++K+
Sbjct: 899 DFVAVQEKFAVLLNSLILAKCFRCKLWENSLHVSKQ 934
>SGD|S000003220 [details] [associations]
symbol:HFM1 "Meiosis specific DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0007129 "synapsis" evidence=IGI;IMP]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0007126
"meiosis" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006268 "DNA unwinding involved in
replication" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SGD:S000003220 GO:GO:0005524
GO:GO:0005634 EMBL:BK006941 GO:GO:0046872 GO:GO:0003677 EMBL:X94357
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0007131 GO:GO:0008026 GO:GO:0007129
GO:GO:0006268 KO:K15271 EMBL:Z72773 EMBL:U22156 RefSeq:NP_011263.2
ProteinModelPortal:P51979 SMR:P51979 DIP:DIP-2604N IntAct:P51979
MINT:MINT-426642 STRING:P51979 PaxDb:P51979 PeptideAtlas:P51979
EnsemblFungi:YGL251C GeneID:852641 KEGG:sce:YGL251C CYGD:YGL251c
GeneTree:ENSGT00550000074822 HOGENOM:HOG000093662 OMA:GNYECNH
OrthoDB:EOG4WWVSR NextBio:971894 Genevestigator:P51979
GermOnline:YGL251C Uniprot:P51979
Length = 1187
Score = 164 (62.8 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 44/147 (29%), Positives = 74/147 (50%)
Query: 727 FSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAM 786
FS+ K + P + +++GIA HHAG+ + +E F G + +L ST T A+
Sbjct: 397 FSKSKKRCNHNPSDKILNECMQQGIAFHHAGISLEDRTAVEKEFLAGSINILCSTSTLAV 456
Query: 787 GVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGES 846
GVN PA V+ + ++ E ++ + QM GRAGR + G V++ ++ +
Sbjct: 457 GVNLPAYLVIIKGTKSWNSSEIQEYSDLDVLQMIGRAGRPQFETHGCAVIMTDSKM--KQ 514
Query: 847 DLKHIIVGSATRLESQFRLTYIMILHL 873
+++I G+ LES L +I HL
Sbjct: 515 TYENLIHGTDV-LESSLHLN--LIEHL 538
Score = 130 (50.8 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 49/166 (29%), Positives = 82/166 (49%)
Query: 444 TRAVYTAPIKTISNQKYRDFSGKF---DVGLLTGDVS-LRPEAS--C-LIMTTEILRSML 496
T+ +Y AP K++ + Y+++ F VG+LT D S L E + C +I+TT +L
Sbjct: 189 TKIIYIAPTKSLCYEMYKNWFPSFVNLSVGMLTSDTSFLETEKAKKCNIIITTPEKWDLL 248
Query: 497 YRG-ADIIRDIEWV---IFDEVHYVNDIERGVVWEEVIIMLP---RHINIVLLSATVPNT 549
R +D R E V + DE+H + + +RG E ++ + ++I V LSATVPN
Sbjct: 249 TRRWSDYSRLFELVKLVLVDEIHTIKE-KRGASLEVILTRMNTMCQNIRFVALSATVPNI 307
Query: 550 VEFADWIGRTKQKKIRVTGTTK--RPVPLEHCLYYSGEFYKVCENE 593
+ A W+ + + + R V L +Y G + C+N+
Sbjct: 308 EDLALWLKTNNELPANILSFDESYRQVQLTKFVY--GYSFN-CKND 350
Score = 106 (42.4 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 45/152 (29%), Positives = 74/152 (48%)
Query: 397 FPF-ELDNFQKEAIYYL-ENGDSVFVAAHTSAGKTVVAEYAFALATKHC------TRAVY 448
F F E + Q EA + E+ ++ +++ T +GKTV+ E A K T+ +Y
Sbjct: 134 FKFTEFNKMQSEAFPSIYESNENCIISSPTGSGKTVLFELAILRLIKETNSDTNNTKIIY 193
Query: 449 TAPIKTISNQKYRDFSGKF---DVGLLTGDVS-LRPEAS--C-LIMTTEILRSMLYRG-A 500
AP K++ + Y+++ F VG+LT D S L E + C +I+TT +L R +
Sbjct: 194 IAPTKSLCYEMYKNWFPSFVNLSVGMLTSDTSFLETEKAKKCNIIITTPEKWDLLTRRWS 253
Query: 501 DIIRDIEWVIFDEVHYVNDIE--RGVVWEEVI 530
D R E V V ++ I+ RG E ++
Sbjct: 254 DYSRLFELVKLVLVDEIHTIKEKRGASLEVIL 285
>WB|WBGene00021905 [details] [associations]
symbol:helq-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IGI] [GO:0051117 "ATPase
binding" evidence=IPI] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 GO:GO:0000712 GO:GO:0017116
OMA:SRPLENC EMBL:FO080183 RefSeq:NP_001022911.1
ProteinModelPortal:H2KY86 SMR:H2KY86 EnsemblMetazoa:Y55B1AL.3a
GeneID:175210 KEGG:cel:CELE_Y55B1AL.3 CTD:175210
WormBase:Y55B1AL.3a Uniprot:H2KY86
Length = 923
Score = 201 (75.8 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 92/323 (28%), Positives = 151/323 (46%)
Query: 645 QNKHSVV--GIKNSGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNHCDKLA 702
Q H V G N G L+ ++ L+ KL K+ VIFC +K +C+ +A
Sbjct: 363 QTMHQVSENGDLNPAGDLPTNNLKSTDPDGICQLLAKLIPKN--SAVIFCPNKKNCENVA 420
Query: 703 DGMSGIDLTSSSEKSEIRVFCDKAF--SRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLP 760
+ L + +++ R D AF S L +D V Q +L G+A HH+GL
Sbjct: 421 V-LIAKTLPAHIRQAK-RAESD-AFLQSYLSDNDDERMDAVLKQCILS-GVAYHHSGLTQ 476
Query: 761 IVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMA 820
++ +E F G++ V+ +T T A GVN P R V+ GRE +L +Y QMA
Sbjct: 477 DERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIK--APMVGRE--RLGKAQYLQMA 532
Query: 821 GRAGRRGLDKIG---TVVVLCRDEIPGESDLKHIIVGSATRLESQFRL-TYIMILHLLRV 876
GRAGR G D G T++ +E LK I + L S+ + ++I+ +L++
Sbjct: 533 GRAGRAGFDTKGDCITIIKAGEEERWFREMLKSDIPRCMSSLSSEESMGSFILDCVVLKL 592
Query: 877 EELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKTIECIKGEPAIEEYYDMYYEAE 936
E E M ++ F++Q+ PE +RKL + +K +EE+Y + E
Sbjct: 593 AENIEEIMTAVRYSLFYAQES-PEN----IRKLVE-----SSVK---RLEEHYFITIEPL 639
Query: 937 KYNNQITEAFMQSAHQFLMPGRV 959
+ + +E Q++ +PG++
Sbjct: 640 E-QDVASEPSAQASSIPRVPGKI 661
Score = 98 (39.6 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 53/210 (25%), Positives = 90/210 (42%)
Query: 412 LENGDSVFVAAHTSAGKTVVAEYAF---ALATKHCTRAVYTAPIKTISNQKYR---DFSG 465
L +G++ ++ T AGKT++AE A+ K A+ P I +K F
Sbjct: 181 LLDGENCILSLPTGAGKTLIAEVLMLREAIVRKR--NAILVLPYVAIVQEKISALAPFED 238
Query: 466 KFDVGLLT-----G---DVSLRPEASCLIMTTE----ILRSMLYRGADIIRDIEWVIFDE 513
F + + G + R S + T E ++ S++ +G + + V+ DE
Sbjct: 239 AFGINIEEYASNKGRFPPIKRRKRVSVYVATIEKANMLINSLITQGQ--LDRVGMVVVDE 296
Query: 514 VHYVNDIERGVVWEEVII-MLPRHIN-IVLLSATVPNT--VEFADWIGRTKQKKIRVTGT 569
+H + D RG + E+++ L + IV +SAT+PN ++FA + V T
Sbjct: 297 LHMIGDGGRGAILEQLLAKFLYKGTGQIVGMSATLPNIDDLKFA--------LRAFVYST 348
Query: 570 TKRPVPLEHCLYYSGEFYKVCENEAFIPQG 599
RPV L + ++V EN P G
Sbjct: 349 NFRPVELTEFVKIGQTMHQVSENGDLNPAG 378
Score = 39 (18.8 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 18/81 (22%), Positives = 31/81 (38%)
Query: 1078 QVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVEAYYKWAGLLRK 1137
Q + + S A FS+ + + L+ + Q L +L + V+ K +
Sbjct: 799 QSSISQAASIAKFSEKITTMWPLRKLLPELVQRLSEAAQPELLPLMTVDGIKKARAAILF 858
Query: 1138 MAANKCHGCIKLEEHMKLTKE 1158
A K G I +KL +E
Sbjct: 859 KAGYKTVGMIARANPLKLVQE 879
>POMBASE|SPAC694.02 [details] [associations]
symbol:SPAC694.02 "DEAD/DEAH box helicase" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC694.02
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 PIR:T50247 RefSeq:NP_594482.1
ProteinModelPortal:Q9P7T8 PRIDE:Q9P7T8 EnsemblFungi:SPAC694.02.1
GeneID:2543333 KEGG:spo:SPAC694.02 HOGENOM:HOG000194492 OMA:HTRDYRI
OrthoDB:EOG4S4SQ7 NextBio:20804349 Uniprot:Q9P7T8
Length = 1717
Score = 174 (66.3 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 46/127 (36%), Positives = 69/127 (54%)
Query: 747 LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGR 806
L RGI IHH+GL ++++E+LF G + V+ +T T ++G+N P RTVVF D
Sbjct: 1221 LYRGIGIHHSGLNRRYRQIVEVLFRCGQLTVVIATRTLSLGINMPCRTVVFLG----DSL 1276
Query: 807 EFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLT 866
+ L + Q AGRAGRRG D +G V L +P + ++ ++ QF LT
Sbjct: 1277 QLNAL---NFHQAAGRAGRRGFDLLGHVGFL---GVPLHK-IYRLLTTKLWDIQGQFPLT 1329
Query: 867 YIMILHL 873
++L L
Sbjct: 1330 TSLVLQL 1336
Score = 125 (49.1 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 50/174 (28%), Positives = 80/174 (45%)
Query: 399 FELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAF--ALATKHCTRAVYTAPIKTIS 456
F+ D +Q+E + L+ +SVFV A TS+GKT ++ YA L +Y AP K +
Sbjct: 734 FDPDEWQRETLDILDRDESVFVVAPTSSGKTFISFYAMEKVLRDNDDGVVIYVAPTKALV 793
Query: 457 NQ----------KYRDFSGKFDVGLLTGDVSLRPEASCLIMTT--EILRSMLYRGADIIR 504
NQ K+ +G+ + T D + +C ++ T +L+SML + A
Sbjct: 794 NQLSAEVYARFNKHYPHAGQTVWSVYTRDYRINNPTNCQVLITVPHVLQSMLLQPALANA 853
Query: 505 DIEWV--IFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWI 556
+ I + + + EE +++L IV LSATV N EF W+
Sbjct: 854 WCPKIRRIIFDEIHCIGQMEDGLVEEQLLLLAP-CPIVALSATVGNPQEFQVWL 906
Score = 58 (25.5 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 674 LTLINKLSKKSLLPVVIFCFSKNHCDKLAD 703
L ++ L K LLP + F + + C+ LA+
Sbjct: 1079 LPMLKDLHSKELLPAICFNYDRQECEYLAE 1108
Score = 37 (18.1 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 44 FILPPAFPRETAESIKEHIEDKYLSMGLDTNEFSPEK 80
F P +E+ +++KE K G +T EK
Sbjct: 499 FTQGPNSTKESKQAVKEETSVKNSPKGKNTKNGKAEK 535
>UNIPROTKB|E1BMC0 [details] [associations]
symbol:POLQ "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003887
GO:GO:0043142 EMBL:DAAA02001581 EMBL:DAAA02001582 EMBL:DAAA02001583
IPI:IPI00687324 Ensembl:ENSBTAT00000002501 OMA:CFSDESI
Uniprot:E1BMC0
Length = 2728
Score = 192 (72.6 bits), Expect = 4.2e-15, Sum P(4) = 4.2e-15
Identities = 57/170 (33%), Positives = 90/170 (52%)
Query: 688 VVIFCFSKNHCDKLADGMSG--------IDLTSSSEKSEIR-VFCDK-----AFSRLKGS 733
V++FC SK C+KLAD ++ ++T SE+ V ++ +LK S
Sbjct: 472 VLLFCPSKKWCEKLADIIAREFYSLHHQAEVTGLVRSSELPPVMLEQKGLLEVMDQLKRS 531
Query: 734 DRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPAR 793
L ++ Q + G+A HHAGL +++IE F +G ++VL +T T + GVN PAR
Sbjct: 532 PSGLDSVL--QKTVPWGVAFHHAGLTFEERDIIEGAFRQGQIRVLAATSTLSSGVNLPAR 589
Query: 794 TVVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTV---VVLCRD 840
V+ F GR +L Y QM GRAGR+G+D +G +++C++
Sbjct: 590 RVII-RTPIFSGR-LLDILT--YKQMVGRAGRKGVDTVGNTGESILVCKN 635
Score = 76 (31.8 bits), Expect = 4.2e-15, Sum P(4) = 4.2e-15
Identities = 33/124 (26%), Positives = 56/124 (45%)
Query: 415 GDSVFVAAHTSAGKTVVAEYAFALATKHCTR-AVYTAPIKTISNQKYRDFSGKF-DVGLL 472
G ++ +A TSAGKT+VAE + A++ P +++ +K F +VG+
Sbjct: 240 GKNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIK 299
Query: 473 T----GDVSLRPEASCL---IMTTEILRSMLYRGADIIR-DI-EWVIFDEVHYVNDIERG 523
G S S L + T E ++ R + + D+ V+ DE+H + D RG
Sbjct: 300 VDGYMGSTSPTRHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRG 359
Query: 524 VVWE 527
+ E
Sbjct: 360 YLLE 363
Score = 75 (31.5 bits), Expect = 4.2e-15, Sum P(4) = 4.2e-15
Identities = 62/289 (21%), Positives = 122/289 (42%)
Query: 847 DLKHIIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLM 906
DL + + +A R + ++ + L R + +VE +LK + A F S +K ++++ +
Sbjct: 932 DLVRVSLLNAQRARFLYASGFLTVSDLARADVAEVESVLKNA-APFKSTRKAVDEEEEAV 990
Query: 907 RKLAQPPKTIECIKGEPAIEEYYD---MYYEAEKYNNQ-ITEAFMQ-SAHQFLMPGRVLF 961
+ + +TI + G + E + EA Q + E +Q + H FL L
Sbjct: 991 EE-RRNMRTI-WVTGRKGLSEREAATLIVEEARMILQQDLVEMGVQWNLHSFLNSDTHLL 1048
Query: 962 VKSQTG-QDHLLGAVVKAP--SANNKEYIVMLLKPDLPSASETSLD-KKSGDFSEGYFVI 1017
S++ ++H K+ +K+ + + +T D KS + ++ ++
Sbjct: 1049 TSSESEVKEHKFIPQTKSSYKRLTSKKKSDTIFSDSVNHLPDTMQDLDKSREHTDSFYY- 1107
Query: 1018 PKSKRGLEEEYCGSVSHRKGSGVINIKLPYHGAAAGVSYEVRGIDKKELLCICNCKIKID 1077
K + G +E + S+S K ++IK G + E + K + + + K K +
Sbjct: 1108 -KFQDGNQECH-HSISRGKKQASLSIKKGKLGTSLN---EGKASTSKVVRTLSSRKTKRE 1162
Query: 1078 QVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMNLVE 1126
+ SS S T+ Q K+ + PVKD K++ +NL E
Sbjct: 1163 ALNF----SSEKVS-TISQSWKHGKHRKRSSDS-SPVKDTKMRRINLQE 1205
Score = 58 (25.5 bits), Expect = 4.2e-15, Sum P(4) = 4.2e-15
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 528 EVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGEFY 587
++ I L + IV +SAT+PN A W+ + T RPVPL + Y
Sbjct: 382 DLAIPLSNAVQIVGMSATLPNLELVASWLNA------ELYHTDFRPVPLLESIKIGNSIY 435
Score = 39 (18.8 bits), Expect = 1.7e-11, Sum P(4) = 1.7e-11
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 995 LPSASETSLDKKSG----DFSEGYFVIPKSKRGLEEEYCGS 1031
LP ETSL+ FSE Y V + G E+E+ S
Sbjct: 1610 LP-VPETSLNLSGSLLFDSFSEDYLVEEQRPDGQEKEHLPS 1649
>DICTYBASE|DDB_G0279107 [details] [associations]
symbol:DDB_G0279107 "Helicase POLQ-like"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0279107 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000027 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1204 SUPFAM:SSF47794 GO:GO:0008026 RefSeq:XP_641869.1
ProteinModelPortal:Q54X98 EnsemblProtists:DDB0205039 GeneID:8621875
KEGG:ddi:DDB_G0279107 InParanoid:Q54X98 OMA:LTNDERE
ProtClustDB:CLSZ2430718 Uniprot:Q54X98
Length = 1238
Score = 150 (57.9 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 37/101 (36%), Positives = 55/101 (54%)
Query: 746 LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDG 805
++ G+A H+A L +EVIE F + VL +T T + GVN PAR V+ + R G
Sbjct: 739 MIMAGVAYHNADLTNDEREVIERGFKERSLLVLCATSTLSTGVNLPARRVILRSPRM--G 796
Query: 806 REFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGES 846
R + Y QM GRAGR G+D+ G +++C P ++
Sbjct: 797 RNVLDIR--SYRQMVGRAGRAGIDEFGESILMCDHFAPDKA 835
Score = 139 (54.0 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 63/223 (28%), Positives = 101/223 (45%)
Query: 400 ELDNFQKEAIY--YLENGDSVFVAAHTSAGKTVVAEYAFA--LATKHCTRAVYTAPIKTI 455
+L ++QKE + L G+++ + TS GKT+VAE L K+ ++++ P +I
Sbjct: 453 QLYDWQKECLSDSNLLLGENLIYSLPTSGGKTLVAEIILFRNLLIKN-KKSLFIFPFVSI 511
Query: 456 SNQK---YRDFSGKFDVGL-----LTGDVSLRPEASCLIMTTE---ILRSMLYRGADIIR 504
+K +FS + + G + + P LI T E I+ + L ++
Sbjct: 512 VCEKTESMHEFSSALQIPVEGYHGCNGTIPVLPGKRLLICTIEKANIIVNQLIEDGRLL- 570
Query: 505 DIEWVIFDEVHYVNDIERGVVWE----EVIIMLPRHINIVLLSATVPNTVEFADWI-GRT 559
DI V+ DE+H + D ERG + E +++ M I I+ +SAT+PN W G
Sbjct: 571 DIGCVVVDEIHMIGDGERGQLLEVLISKLLYMSKGQIQIIGMSATIPNIDNLQKWFRGGV 630
Query: 560 KQKKIRVTGTTKRPVPLEHCLYYSGEFYKVCENEAFIPQGWKA 602
Q GT RPVPL + + Y N QG +A
Sbjct: 631 YQ------GTF-RPVPLTEYIKIGDKLYDKENNLVKSLQGTEA 666
Score = 39 (18.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 636 KREHPNRGKQNKHS-VVGIKNSGGSQNN 662
K P QN + ++GI N+ + NN
Sbjct: 174 KTNIPKNNYQNDNKKIIGIINTHNNNNN 201
>GENEDB_PFALCIPARUM|PF14_0370 [details] [associations]
symbol:PF14_0370 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 GO:GO:0004004 KO:K01509
RefSeq:XP_001348544.1 ProteinModelPortal:Q8IL78
EnsemblProtists:PF14_0370:mRNA GeneID:811952 KEGG:pfa:PF14_0370
EuPathDB:PlasmoDB:PF3D7_1439100 HOGENOM:HOG000282165 OMA:GVAIHHA
ProtClustDB:CLSZ2433245 Uniprot:Q8IL78
Length = 2472
Score = 158 (60.7 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 34/108 (31%), Positives = 59/108 (54%)
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
NL + ++ +L+ GI IHHAGL K ++E LF ++++L T T A G+N PA V
Sbjct: 1800 NLIENEHLKEILKYGIGIHHAGLNENDKTIVEYLFLNKIIQILICTSTLAWGINLPAYLV 1859
Query: 796 VFDNLRKFDGR--EFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDE 841
+ +D + +++ + + QM GRAGR D ++L +++
Sbjct: 1860 IIKGNEFYDAKTKKYKDIPYTDLLQMIGRAGRPQFDDKALAILLVQEK 1907
Score = 137 (53.3 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 41/157 (26%), Positives = 77/157 (49%)
Query: 390 VPDLALDFPFELDNFQKEAIYY--LENGDSVFVAAHTSAGKTVVAEYAFALATKHCT--R 445
+P+ F F+ N + +++ +++ + A T +GKTV+ E C +
Sbjct: 1359 IPNYIKFFSFKYFNPIQTQMFHATFHTDENILLGAPTGSGKTVIGELCILRNLLRCEGQK 1418
Query: 446 AVYTAPIKTISNQKYRDFSGKF------DVGLLTGDVSLRPE----ASCLIMTTEILRSM 495
+VY P+K I N++Y+ + KF +V LTGD + E ++ +I T E L +
Sbjct: 1419 SVYICPMKAIVNERYKSWKSKFKSLFNKNVIELTGDKNENKENIAESNIIICTPEKLDVI 1478
Query: 496 L--YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVI 530
++ +++I +IFDE+H + RG V E ++
Sbjct: 1479 TRNWKNKKFVKNINLIIFDEIHLLGQENRGGVIEILV 1515
Score = 133 (51.9 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 45/168 (26%), Positives = 76/168 (45%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSR--LKGS 733
+IN L K +IF S+N +K + + + + + +EI F + ++ +K
Sbjct: 686 IINSLKKDK--QCIIFVCSRNETNKTIEFL----INHALKNNEIEYFVNNVYTDNDIKKK 739
Query: 734 DRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPAR 793
+ + ++ G IHHAG+ K ++E LF + V VL T T A GVN P
Sbjct: 740 IKKSNNLY-IKQFYEYGCTIHHAGMSRSDKILVESLFKKKVFNVLCCTSTLAWGVNLPVH 798
Query: 794 TVVFDNLRKFD---GR-EFRQLLPGEYTQMAGRAGRRGLDKIGTVVVL 837
TV+ F G+ E +L + Q+ GR GR + G +++
Sbjct: 799 TVIIKGTNYFSSESGKLEDMDIL--DINQIFGRCGRPQYESHGHAILI 844
Score = 68 (29.0 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 23/87 (26%), Positives = 43/87 (49%)
Query: 502 IIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHIN-------IVLLSATVPNTVEFAD 554
+I+ I+ +I DEVH +N +RG V E ++ ++ I+ +SAT+PN + D
Sbjct: 580 LIKYIKCLILDEVHLLNT-DRGDVIETIVSRFLQYSETSQSIRRIMAMSATLPNYKDVRD 638
Query: 555 WIGRTKQKKIRVTGTTKRPVPLEHCLY 581
++ + + R + L+ LY
Sbjct: 639 FL-KVENDMCYYFNEKYRSIQLDKTLY 664
Score = 51 (23.0 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 27/113 (23%), Positives = 51/113 (45%)
Query: 1245 FVFQQRNTSEPSLTPKLSVAKERLYNTAIRLGELQ--AHFKVQID-PEEYARD-NLKFG- 1299
F +N + + +S AKE N IR +++ + K + D EEY N+
Sbjct: 972 FAENVQNNNYIEIIQVISKAKE-FENIQIRNEDMKDFLYLKDKCDIKEEYDESKNMTLRI 1030
Query: 1300 LVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREF-RNAAAIMGNS 1351
L+EV + F+ ICE+ + + I+R + + C +N + ++ N+
Sbjct: 1031 LIEVYLRRLQINNFSIICEINYIVQN-IIRILYAYYDICLNILKNISNLIMNT 1082
>UNIPROTKB|Q8IL78 [details] [associations]
symbol:PF14_0370 "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0004004
KO:K01509 RefSeq:XP_001348544.1 ProteinModelPortal:Q8IL78
EnsemblProtists:PF14_0370:mRNA GeneID:811952 KEGG:pfa:PF14_0370
EuPathDB:PlasmoDB:PF3D7_1439100 HOGENOM:HOG000282165 OMA:GVAIHHA
ProtClustDB:CLSZ2433245 Uniprot:Q8IL78
Length = 2472
Score = 158 (60.7 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 34/108 (31%), Positives = 59/108 (54%)
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
NL + ++ +L+ GI IHHAGL K ++E LF ++++L T T A G+N PA V
Sbjct: 1800 NLIENEHLKEILKYGIGIHHAGLNENDKTIVEYLFLNKIIQILICTSTLAWGINLPAYLV 1859
Query: 796 VFDNLRKFDGR--EFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDE 841
+ +D + +++ + + QM GRAGR D ++L +++
Sbjct: 1860 IIKGNEFYDAKTKKYKDIPYTDLLQMIGRAGRPQFDDKALAILLVQEK 1907
Score = 137 (53.3 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 41/157 (26%), Positives = 77/157 (49%)
Query: 390 VPDLALDFPFELDNFQKEAIYY--LENGDSVFVAAHTSAGKTVVAEYAFALATKHCT--R 445
+P+ F F+ N + +++ +++ + A T +GKTV+ E C +
Sbjct: 1359 IPNYIKFFSFKYFNPIQTQMFHATFHTDENILLGAPTGSGKTVIGELCILRNLLRCEGQK 1418
Query: 446 AVYTAPIKTISNQKYRDFSGKF------DVGLLTGDVSLRPE----ASCLIMTTEILRSM 495
+VY P+K I N++Y+ + KF +V LTGD + E ++ +I T E L +
Sbjct: 1419 SVYICPMKAIVNERYKSWKSKFKSLFNKNVIELTGDKNENKENIAESNIIICTPEKLDVI 1478
Query: 496 L--YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVI 530
++ +++I +IFDE+H + RG V E ++
Sbjct: 1479 TRNWKNKKFVKNINLIIFDEIHLLGQENRGGVIEILV 1515
Score = 133 (51.9 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 45/168 (26%), Positives = 76/168 (45%)
Query: 676 LINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSR--LKGS 733
+IN L K +IF S+N +K + + + + + +EI F + ++ +K
Sbjct: 686 IINSLKKDK--QCIIFVCSRNETNKTIEFL----INHALKNNEIEYFVNNVYTDNDIKKK 739
Query: 734 DRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPAR 793
+ + ++ G IHHAG+ K ++E LF + V VL T T A GVN P
Sbjct: 740 IKKSNNLY-IKQFYEYGCTIHHAGMSRSDKILVESLFKKKVFNVLCCTSTLAWGVNLPVH 798
Query: 794 TVVFDNLRKFD---GR-EFRQLLPGEYTQMAGRAGRRGLDKIGTVVVL 837
TV+ F G+ E +L + Q+ GR GR + G +++
Sbjct: 799 TVIIKGTNYFSSESGKLEDMDIL--DINQIFGRCGRPQYESHGHAILI 844
Score = 68 (29.0 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 23/87 (26%), Positives = 43/87 (49%)
Query: 502 IIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHIN-------IVLLSATVPNTVEFAD 554
+I+ I+ +I DEVH +N +RG V E ++ ++ I+ +SAT+PN + D
Sbjct: 580 LIKYIKCLILDEVHLLNT-DRGDVIETIVSRFLQYSETSQSIRRIMAMSATLPNYKDVRD 638
Query: 555 WIGRTKQKKIRVTGTTKRPVPLEHCLY 581
++ + + R + L+ LY
Sbjct: 639 FL-KVENDMCYYFNEKYRSIQLDKTLY 664
Score = 51 (23.0 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 27/113 (23%), Positives = 51/113 (45%)
Query: 1245 FVFQQRNTSEPSLTPKLSVAKERLYNTAIRLGELQ--AHFKVQID-PEEYARD-NLKFG- 1299
F +N + + +S AKE N IR +++ + K + D EEY N+
Sbjct: 972 FAENVQNNNYIEIIQVISKAKE-FENIQIRNEDMKDFLYLKDKCDIKEEYDESKNMTLRI 1030
Query: 1300 LVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREF-RNAAAIMGNS 1351
L+EV + F+ ICE+ + + I+R + + C +N + ++ N+
Sbjct: 1031 LIEVYLRRLQINNFSIICEINYIVQN-IIRILYAYYDICLNILKNISNLIMNT 1082
>UNIPROTKB|F1NTD6 [details] [associations]
symbol:ascc3 "Activating signal cointegrator 1 complex
subunit 3" species:9031 "Gallus gallus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006307 "DNA dealkylation involved in
DNA repair" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:10973 KO:K01529 GO:GO:0043140
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
EMBL:AADN02002229 EMBL:AADN02002230 EMBL:AADN02002231
EMBL:AADN02002232 EMBL:AADN02002233 EMBL:AADN02002234
IPI:IPI00590520 RefSeq:XP_419816.1 UniGene:Gga.31679
ProteinModelPortal:F1NTD6 PRIDE:F1NTD6 GeneID:421790
KEGG:gga:421790 Uniprot:F1NTD6
Length = 2211
Score = 156 (60.0 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 45/119 (37%), Positives = 61/119 (51%)
Query: 730 LKGSDRNLPQI---VRVQSL---LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTET 783
LK +R + I VR +L L GI +HHAGL ++ +E LF ++VL +T T
Sbjct: 1598 LKMDEREMNDIIGTVRDSNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATST 1657
Query: 784 FAMGVNAPARTVVFDNLRKFDGREFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCRD 840
A GVN PA V+ +DG+ R + P + QM GRAGR D G V+L D
Sbjct: 1658 LAWGVNFPAHLVIVKGTEYYDGKTRRYVDYPITDVLQMMGRAGRPQFDDQGKAVILVHD 1716
Score = 152 (58.6 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 37/104 (35%), Positives = 56/104 (53%)
Query: 742 RVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+++ L G +IHHAG+L + ++E LF G +KVL T T A GVN PA VV +
Sbjct: 779 QLRELFPDGFSIHHAGMLRQDRSLVENLFSNGHIKVLVCTATLAWGVNLPAHAVVIKGTQ 838
Query: 802 KFDGRE--FRQLLPGEYTQMAGRAGRRGLDKIGT-VVVLCRDEI 842
+ + F L + Q+ GRAGR DK G +++ D++
Sbjct: 839 IYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKL 882
Score = 138 (53.6 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 50/158 (31%), Positives = 83/158 (52%)
Query: 391 PDLALDFPFELDN-FQKEAIYYLENGD-SVFVAAHTSAGKTVVAEYA-FALATKHCT-RA 446
P+ + + F N Q + + L + D +V + A T +GKTV AE A F + K+ T +A
Sbjct: 1325 PEYEVLYKFTHFNPIQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKA 1384
Query: 447 VYTAPIKTISNQKYRDFSGKFDVGL------LTGDVS--LRPEASC-LIMTTE-----IL 492
VY AP+K + ++ D+ + + L LTGDV+ +R A LI+TT +
Sbjct: 1385 VYIAPLKALVRERIEDWKVRIEEKLGKKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVS 1444
Query: 493 RSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVI 530
RS ++ ++ + +I DE+H + D ERG V E ++
Sbjct: 1445 RS--WQNRSYVQKVSILIIDEIHLLGD-ERGPVLEVIV 1479
Score = 109 (43.4 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 40/132 (30%), Positives = 64/132 (48%)
Query: 472 LTGDVS--LRPEASC-LIMTTE-----ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERG 523
LTGDV+ +R A LI+TT + RS ++ ++ + +I DE+H + D ERG
Sbjct: 1416 LTGDVTPDMRAIAQADLIVTTPEKWDGVSRS--WQNRSYVQKVSILIIDEIHLLGD-ERG 1472
Query: 524 VVWEEVII---MLPRH----INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ + H + +V LS + N + ADW+ + + RPVPL
Sbjct: 1473 PVLEVIVSRTNFISSHTEKPVRVVGLSTALANARDLADWLNINQMGLFNFRPSV-RPVPL 1531
Query: 577 E-HCLYYSGEFY 587
E H + G+ Y
Sbjct: 1532 EVHIQGFPGQHY 1543
Score = 80 (33.2 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 36/144 (25%), Positives = 71/144 (49%)
Query: 416 DSVFVAAHTSAGKTVVA----------EYAFALATKHCTRAVYTAPIKTISNQKYRDFSG 465
+++ + A T AGKT +A + K + VY AP+K ++ + FS
Sbjct: 502 ENMLICAPTGAGKTNIAMLTVLHEIRQHVQHGVIKKDEFKIVYVAPMKALAAEMTNYFSK 561
Query: 466 KFD-VGL----LTGDVSL-RPEA--SCLIMTTEILRSMLYRGA--DIIRD--IEWVIFDE 513
+ + +G+ LTGD+ L + E + +++TT ++ R + D+ ++ +I DE
Sbjct: 562 RLEPLGITVKELTGDMQLSKGEILRTQMLVTTPEKWDVVTRKSVGDVALSQLVKLLILDE 621
Query: 514 VHYVNDIERGVVWEEVIIMLPRHI 537
VH +++ +RG V E ++ R +
Sbjct: 622 VHLLHE-DRGPVLESIVARTLRQV 644
Score = 77 (32.2 bits), Expect = 9.9e-07, Sum P(3) = 9.9e-07
Identities = 34/119 (28%), Positives = 61/119 (51%)
Query: 472 LTGDVSL-RPEA--SCLIMTTEILRSMLYRGA--DIIRD--IEWVIFDEVHYVNDIERGV 524
LTGD+ L + E + +++TT ++ R + D+ ++ +I DEVH +++ +RG
Sbjct: 573 LTGDMQLSKGEILRTQMLVTTPEKWDVVTRKSVGDVALSQLVKLLILDEVHLLHE-DRGP 631
Query: 525 VWEEVIIMLPRH-------INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ R I I+ LSAT+PN ++ A ++ + + RPVPL
Sbjct: 632 VLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDSRFRPVPL 690
Score = 43 (20.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 515 HYVNDI-ERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRT 559
HY+ + ++ + + + L ++N + TV N E WI T
Sbjct: 884 HYLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYT 929
Score = 37 (18.1 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 1100 LKSDEKKYPQALDPVKDLKLK 1120
LK DE++ + V+D LK
Sbjct: 1598 LKMDEREMNDIIGTVRDSNLK 1618
>UNIPROTKB|E2QVY0 [details] [associations]
symbol:ASCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005794
GO:GO:0006307 GO:GO:0008283 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 Ensembl:ENSCAFT00000005717
Uniprot:E2QVY0
Length = 1925
Score = 159 (61.0 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 49/156 (31%), Positives = 73/156 (46%)
Query: 687 PVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSL 746
PV+IF S+ A + T K + + ++ + G+ R+ ++
Sbjct: 1557 PVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMD-EREMENIIGTLRDS----NLKLT 1611
Query: 747 LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGR 806
L GI +HHAGL ++ +E LF V+VL +T T A GVN PA V+ +DG+
Sbjct: 1612 LAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGK 1671
Query: 807 EFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCRD 840
R + P + QM GRAGR D G V+L D
Sbjct: 1672 TRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHD 1707
Score = 157 (60.3 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 47/160 (29%), Positives = 80/160 (50%)
Query: 688 VVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQI--VRVQS 745
V++F ++N + A MS I+ +S +I F S +++ + + +V+
Sbjct: 718 VMVFVHARNATVRTA--MSLIERAKNS--GQISCFLPSQGSEYGHAEKQVQKSRNKQVRE 773
Query: 746 LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDG 805
L G +IHHAG+L + ++E LF G +KVL T T A GVN PA V+ + +
Sbjct: 774 LFPDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAA 833
Query: 806 RE--FRQLLPGEYTQMAGRAGRRGLDKIGT-VVVLCRDEI 842
+ F L + Q+ GRAGR D+ G +++ D++
Sbjct: 834 KRGSFVDLGILDVMQIFGRAGRPQFDRFGEGIIITTHDKL 873
Score = 129 (50.5 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 45/143 (31%), Positives = 78/143 (54%)
Query: 405 QKEAIYYLENGD-SVFVAAHTSAGKTVVAEYA-FALATKHCT-RAVYTAPIKTISNQKYR 461
Q + + L + D +V + A T +GKTV AE A F + K+ T +AVY AP+K + ++
Sbjct: 1331 QTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMD 1390
Query: 462 DFSGKFDVGL------LTGDVS--LRPEASC-LIMTTE-----ILRSMLYRGADIIRDIE 507
D+ + + L LTGDV+ ++ A LI+TT + RS ++ + ++ +
Sbjct: 1391 DWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRS--WQNRNYVKQVT 1448
Query: 508 WVIFDEVHYVNDIERGVVWEEVI 530
+I DE+H + + ERG V E ++
Sbjct: 1449 ILIIDEIHLLGE-ERGPVLEVIV 1470
Score = 104 (41.7 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 40/132 (30%), Positives = 66/132 (50%)
Query: 472 LTGDVS--LRPEASC-LIMTTE-----ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERG 523
LTGDV+ ++ A LI+TT + RS ++ + ++ + +I DE+H + + ERG
Sbjct: 1407 LTGDVTPDMKSIAKADLIVTTPEKWDGVSRS--WQNRNYVKQVTILIIDEIHLLGE-ERG 1463
Query: 524 VVWEEVII---MLPRH----INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ + H + IV LS + N + ADW+ Q + + RPVPL
Sbjct: 1464 PVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLN-IHQMGLFNFRPSVRPVPL 1522
Query: 577 E-HCLYYSGEFY 587
E H + G+ Y
Sbjct: 1523 EVHIQGFPGQHY 1534
Score = 84 (34.6 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 35/144 (24%), Positives = 71/144 (49%)
Query: 416 DSVFVAAHTSAGKTVVA----------EYAFALATKHCTRAVYTAPIKTISNQKYRDFSG 465
+++ + A T AGKT +A + + K+ + VY AP+K ++ + FS
Sbjct: 493 ENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPMKALAAEMTNYFSK 552
Query: 466 KFD-VGL----LTGDVSLRPEA---SCLIMTTEILRSMLYRGA--DIIRD--IEWVIFDE 513
+ + +G+ LTGD+ L + +++TT ++ R + D+ ++ +I DE
Sbjct: 553 RLEPLGIVVKELTGDMQLSKNEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDE 612
Query: 514 VHYVNDIERGVVWEEVIIMLPRHI 537
VH +++ +RG V E ++ R +
Sbjct: 613 VHLLHE-DRGPVLESIVARTLRQV 635
Score = 72 (30.4 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 472 LTGDVSLRPEA---SCLIMTTEILRSMLYRGA--DIIRD--IEWVIFDEVHYVNDIERGV 524
LTGD+ L + +++TT ++ R + D+ ++ +I DEVH +++ +RG
Sbjct: 564 LTGDMQLSKNEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGP 622
Query: 525 VWEEVIIMLPRH-------INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ R I I+ LSAT+PN ++ A ++ + RPVPL
Sbjct: 623 VLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVPL 681
Score = 51 (23.0 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 24/96 (25%), Positives = 45/96 (46%)
Query: 1075 KIDQVGLLEDVSSAA--FSKTVQQLLVLKSDEKKYPQALDPVKDL-KLKDMNLVEAYYKW 1131
++D L+ D + A ++ V+ L + K++P + +L K+ D L + W
Sbjct: 1069 EMDSFSLISDSAYVAQNAARIVRALFEIAL-RKRWPAMTYRLLNLSKVIDKRL----WGW 1123
Query: 1132 AGLLRKMAANKCHGCIKLEE-HMKLTKENKRHKDEV 1166
A LR+ + H +LEE ++ + K KDE+
Sbjct: 1124 ASPLRQFSVLPPHILTRLEEKNLTVDKLKDMRKDEI 1159
Score = 43 (20.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 515 HYVNDI-ERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRT 559
HY+ + ++ + + + L ++N + TV N E WI T
Sbjct: 875 HYLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYT 920
>UNIPROTKB|E2RA34 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 KO:K15271 CTD:164045
GeneTree:ENSGT00550000074822 EMBL:AAEX03004823 RefSeq:XP_537081.3
Ensembl:ENSCAFT00000032148 GeneID:479956 KEGG:cfa:479956
Uniprot:E2RA34
Length = 1437
Score = 174 (66.3 bits), Expect = 2.4e-14, Sum P(4) = 2.4e-14
Identities = 38/98 (38%), Positives = 55/98 (56%)
Query: 742 RVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+++ +L G+A HHAG+ ++V+E F G + VLF+T T AMGVN PA VV +
Sbjct: 575 KLRDILIHGVAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTM 634
Query: 802 KFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCR 839
+ G F + + QM GRAGR D T V++ R
Sbjct: 635 HYAGGMFEEYSETDILQMIGRAGRPQFDTTATAVIMTR 672
Score = 131 (51.2 bits), Expect = 2.4e-14, Sum P(4) = 2.4e-14
Identities = 51/154 (33%), Positives = 74/154 (48%)
Query: 396 DFPFELDNFQKEAIYYLENGDSVFV-AAHTSAGKTVVAEYAFALATKHCT------RAVY 448
+FP+ + Q +A L D FV A T +GKTVV E A + VY
Sbjct: 279 EFPY-FNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLMEVPLPWSNIKIVY 337
Query: 449 TAPIKTISNQKYRDFSGKFD-VGL----LTGDVSLRP----EASCLIMTT-EILRSML-- 496
APIK + +Q++ D+ KF +GL LTGD + + + +IMTT E SM
Sbjct: 338 MAPIKALCSQRFDDWKEKFGPIGLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRK 397
Query: 497 YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVI 530
+R +++ + + DEVH V D RG E V+
Sbjct: 398 WRDNSLVQLVRLFLIDEVHVVKDENRGPTLEVVV 431
Score = 81 (33.6 bits), Expect = 2.2e-09, Sum P(4) = 2.2e-09
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 482 ASCLIMTTEILRSML--YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIML------ 533
A ++ T E SM +R +++ + + DEVH V D RG E V+ +
Sbjct: 381 AHIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQSL 440
Query: 534 -PRHIN-------IVLLSATVPNTVEFADWIGRTKQKKIRVTGTTK-RPVPLE 577
P N V +SAT+PN + A+W+ ++ + + K RPV L+
Sbjct: 441 SPPSENSTVIPMRFVAVSATIPNAEDIAEWLSDGERPAVCLKMDEKHRPVKLQ 493
Score = 40 (19.1 bits), Expect = 2.4e-14, Sum P(4) = 2.4e-14
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 1123 NLVEAYYKWAGLLRKMAANKCHGCIKLEEHMKLTKE 1158
+ V K+A LL + KC C E + ++K+
Sbjct: 898 DFVAVQEKFAILLNSLILAKCFRCKLWENSLHVSKQ 933
Score = 37 (18.1 bits), Expect = 2.4e-14, Sum P(4) = 2.4e-14
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 1246 VFQQRNTSEPSLTPKLSVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFG 1299
V Q+ T EP+++ LS + R N L ++ K+Q++ D +FG
Sbjct: 1162 VAQKSETKEPTISSYLSDLRNR--NAVSSLPPVK-RLKMQMNKSRSV-DLKEFG 1211
>UNIPROTKB|E1BNG3 [details] [associations]
symbol:ascc3 "Activating signal cointegrator 1 complex
subunit 3" species:9913 "Bos taurus" [GO:0043140 "ATP-dependent
3'-5' DNA helicase activity" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:DAAA02026160 EMBL:DAAA02026161
EMBL:DAAA02026162 EMBL:DAAA02026163 EMBL:DAAA02026164
EMBL:DAAA02026165 EMBL:DAAA02026166 EMBL:DAAA02026167
EMBL:DAAA02026168 EMBL:DAAA02026169 EMBL:DAAA02026170
EMBL:DAAA02026171 EMBL:DAAA02026172 EMBL:DAAA02026173
EMBL:DAAA02026174 EMBL:DAAA02026175 EMBL:DAAA02026176
EMBL:DAAA02026177 EMBL:DAAA02026178 EMBL:DAAA02026179
EMBL:DAAA02026180 EMBL:DAAA02026181 EMBL:DAAA02026182
EMBL:DAAA02026183 EMBL:DAAA02026184 EMBL:DAAA02026185
EMBL:DAAA02026186 EMBL:DAAA02026187 EMBL:DAAA02026188
EMBL:DAAA02026189 EMBL:DAAA02026190 EMBL:DAAA02026191
EMBL:DAAA02026192 EMBL:DAAA02026193 EMBL:DAAA02026194
EMBL:DAAA02026195 EMBL:DAAA02026196 EMBL:DAAA02026197
EMBL:DAAA02026198 EMBL:DAAA02026199 IPI:IPI00689177
RefSeq:NP_001193047.1 UniGene:Bt.26262 PRIDE:E1BNG3
Ensembl:ENSBTAT00000027294 GeneID:538416 KEGG:bta:538416 CTD:10973
GeneTree:ENSGT00700000104562 KO:K01529 OMA:FPGKHYC NextBio:20877349
GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 Uniprot:E1BNG3
Length = 2201
Score = 159 (61.0 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 48/156 (30%), Positives = 73/156 (46%)
Query: 687 PVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSL 746
PV+IF S+ A + T K + + ++ + G+ R+ ++
Sbjct: 1557 PVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMD-EREMENIIGTIRDS----NLKLT 1611
Query: 747 LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGR 806
L GI +HHAGL ++ +E LF ++VL +T T A GVN PA V+ +DG+
Sbjct: 1612 LAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIIKGTEYYDGK 1671
Query: 807 EFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCRD 840
R + P + QM GRAGR D G V+L D
Sbjct: 1672 TRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHD 1707
Score = 155 (59.6 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 37/104 (35%), Positives = 56/104 (53%)
Query: 742 RVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+V+ L G +IHHAG+L + ++E LF G +KVL T T A GVN PA V+ +
Sbjct: 770 QVRELFPDGFSIHHAGMLRQDRNLVESLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQ 829
Query: 802 KFDGRE--FRQLLPGEYTQMAGRAGRRGLDKIGT-VVVLCRDEI 842
+ + F L + Q+ GRAGR DK G +++ D++
Sbjct: 830 IYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKL 873
Score = 129 (50.5 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 45/143 (31%), Positives = 78/143 (54%)
Query: 405 QKEAIYYLENGD-SVFVAAHTSAGKTVVAEYA-FALATKHCT-RAVYTAPIKTISNQKYR 461
Q + + L + D +V + A T +GKTV AE A F + K+ T +AVY AP+K + ++
Sbjct: 1331 QTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMD 1390
Query: 462 DFSGKFDVGL------LTGDVS--LRPEASC-LIMTTE-----ILRSMLYRGADIIRDIE 507
D+ + + L LTGDV+ ++ A LI+TT + RS ++ + ++ +
Sbjct: 1391 DWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRS--WQNRNYVKQVT 1448
Query: 508 WVIFDEVHYVNDIERGVVWEEVI 530
+I DE+H + + ERG V E ++
Sbjct: 1449 ILIIDEIHLLGE-ERGPVLEVIV 1470
Score = 107 (42.7 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 40/132 (30%), Positives = 67/132 (50%)
Query: 472 LTGDVS--LRPEASC-LIMTTE-----ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERG 523
LTGDV+ ++ A LI+TT + RS ++ + ++ + +I DE+H + + ERG
Sbjct: 1407 LTGDVTPDMKSIAKADLIVTTPEKWDGVSRS--WQNRNYVKQVTILIIDEIHLLGE-ERG 1463
Query: 524 VVWEEVII---MLPRH----INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ + H + IV LS + N + ADW+ +Q + + RPVPL
Sbjct: 1464 PVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLN-IRQMGLFNFRPSVRPVPL 1522
Query: 577 E-HCLYYSGEFY 587
E H + G+ Y
Sbjct: 1523 EVHIQGFPGQHY 1534
Score = 84 (34.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 35/144 (24%), Positives = 71/144 (49%)
Query: 416 DSVFVAAHTSAGKTVVA----------EYAFALATKHCTRAVYTAPIKTISNQKYRDFSG 465
+++ + A T AGKT +A + + K+ + VY AP+K ++ + FS
Sbjct: 493 ENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPMKALAAEMTNYFSK 552
Query: 466 KFD-VGL----LTGDVSLRPEA---SCLIMTTEILRSMLYRGA--DIIRD--IEWVIFDE 513
+ + +G+ LTGD+ L + +++TT ++ R + D+ ++ +I DE
Sbjct: 553 RLEPLGIVVKELTGDMQLSKNEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDE 612
Query: 514 VHYVNDIERGVVWEEVIIMLPRHI 537
VH +++ +RG V E ++ R +
Sbjct: 613 VHLLHE-DRGPVLESIVARTLRQV 635
Score = 72 (30.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 472 LTGDVSLRPEA---SCLIMTTEILRSMLYRGA--DIIRD--IEWVIFDEVHYVNDIERGV 524
LTGD+ L + +++TT ++ R + D+ ++ +I DEVH +++ +RG
Sbjct: 564 LTGDMQLSKNEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGP 622
Query: 525 VWEEVIIMLPRH-------INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ R I I+ LSAT+PN ++ A ++ + RPVPL
Sbjct: 623 VLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLFFFDGRFRPVPL 681
Score = 44 (20.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 515 HYVNDI-ERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRT 559
HY++ + ++ + + + L ++N + TV N E WI T
Sbjct: 875 HYLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYT 920
>UNIPROTKB|F6Y2F0 [details] [associations]
symbol:ASCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CTD:10973 GeneTree:ENSGT00700000104562 KO:K01529 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 GO:GO:0008026
Ensembl:ENSCAFT00000005717 EMBL:AAEX03008562 RefSeq:XP_854167.1
ProteinModelPortal:F6Y2F0 GeneID:475008 KEGG:cfa:475008 OMA:XAVYIAP
Uniprot:F6Y2F0
Length = 2202
Score = 159 (61.0 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 49/156 (31%), Positives = 73/156 (46%)
Query: 687 PVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSL 746
PV+IF S+ A + T K + + ++ + G+ R+ ++
Sbjct: 1557 PVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMD-EREMENIIGTLRDS----NLKLT 1611
Query: 747 LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGR 806
L GI +HHAGL ++ +E LF V+VL +T T A GVN PA V+ +DG+
Sbjct: 1612 LAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGK 1671
Query: 807 EFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCRD 840
R + P + QM GRAGR D G V+L D
Sbjct: 1672 TRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHD 1707
Score = 157 (60.3 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 47/160 (29%), Positives = 80/160 (50%)
Query: 688 VVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQI--VRVQS 745
V++F ++N + A MS I+ +S +I F S +++ + + +V+
Sbjct: 718 VMVFVHARNATVRTA--MSLIERAKNS--GQISCFLPSQGSEYGHAEKQVQKSRNKQVRE 773
Query: 746 LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDG 805
L G +IHHAG+L + ++E LF G +KVL T T A GVN PA V+ + +
Sbjct: 774 LFPDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAA 833
Query: 806 RE--FRQLLPGEYTQMAGRAGRRGLDKIGT-VVVLCRDEI 842
+ F L + Q+ GRAGR D+ G +++ D++
Sbjct: 834 KRGSFVDLGILDVMQIFGRAGRPQFDRFGEGIIITTHDKL 873
Score = 129 (50.5 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 45/143 (31%), Positives = 78/143 (54%)
Query: 405 QKEAIYYLENGD-SVFVAAHTSAGKTVVAEYA-FALATKHCT-RAVYTAPIKTISNQKYR 461
Q + + L + D +V + A T +GKTV AE A F + K+ T +AVY AP+K + ++
Sbjct: 1331 QTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMD 1390
Query: 462 DFSGKFDVGL------LTGDVS--LRPEASC-LIMTTE-----ILRSMLYRGADIIRDIE 507
D+ + + L LTGDV+ ++ A LI+TT + RS ++ + ++ +
Sbjct: 1391 DWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRS--WQNRNYVKQVT 1448
Query: 508 WVIFDEVHYVNDIERGVVWEEVI 530
+I DE+H + + ERG V E ++
Sbjct: 1449 ILIIDEIHLLGE-ERGPVLEVIV 1470
Score = 104 (41.7 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 40/132 (30%), Positives = 66/132 (50%)
Query: 472 LTGDVS--LRPEASC-LIMTTE-----ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERG 523
LTGDV+ ++ A LI+TT + RS ++ + ++ + +I DE+H + + ERG
Sbjct: 1407 LTGDVTPDMKSIAKADLIVTTPEKWDGVSRS--WQNRNYVKQVTILIIDEIHLLGE-ERG 1463
Query: 524 VVWEEVII---MLPRH----INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ + H + IV LS + N + ADW+ Q + + RPVPL
Sbjct: 1464 PVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLN-IHQMGLFNFRPSVRPVPL 1522
Query: 577 E-HCLYYSGEFY 587
E H + G+ Y
Sbjct: 1523 EVHIQGFPGQHY 1534
Score = 84 (34.6 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 35/144 (24%), Positives = 71/144 (49%)
Query: 416 DSVFVAAHTSAGKTVVA----------EYAFALATKHCTRAVYTAPIKTISNQKYRDFSG 465
+++ + A T AGKT +A + + K+ + VY AP+K ++ + FS
Sbjct: 493 ENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPMKALAAEMTNYFSK 552
Query: 466 KFD-VGL----LTGDVSLRPEA---SCLIMTTEILRSMLYRGA--DIIRD--IEWVIFDE 513
+ + +G+ LTGD+ L + +++TT ++ R + D+ ++ +I DE
Sbjct: 553 RLEPLGIVVKELTGDMQLSKNEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDE 612
Query: 514 VHYVNDIERGVVWEEVIIMLPRHI 537
VH +++ +RG V E ++ R +
Sbjct: 613 VHLLHE-DRGPVLESIVARTLRQV 635
Score = 72 (30.4 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 472 LTGDVSLRPEA---SCLIMTTEILRSMLYRGA--DIIRD--IEWVIFDEVHYVNDIERGV 524
LTGD+ L + +++TT ++ R + D+ ++ +I DEVH +++ +RG
Sbjct: 564 LTGDMQLSKNEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGP 622
Query: 525 VWEEVIIMLPRH-------INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ R I I+ LSAT+PN ++ A ++ + RPVPL
Sbjct: 623 VLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVPL 681
Score = 51 (23.0 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 24/96 (25%), Positives = 45/96 (46%)
Query: 1075 KIDQVGLLEDVSSAA--FSKTVQQLLVLKSDEKKYPQALDPVKDL-KLKDMNLVEAYYKW 1131
++D L+ D + A ++ V+ L + K++P + +L K+ D L + W
Sbjct: 1069 EMDSFSLISDSAYVAQNAARIVRALFEIAL-RKRWPAMTYRLLNLSKVIDKRL----WGW 1123
Query: 1132 AGLLRKMAANKCHGCIKLEE-HMKLTKENKRHKDEV 1166
A LR+ + H +LEE ++ + K KDE+
Sbjct: 1124 ASPLRQFSVLPPHILTRLEEKNLTVDKLKDMRKDEI 1159
Score = 43 (20.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 515 HYVNDI-ERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRT 559
HY+ + ++ + + + L ++N + TV N E WI T
Sbjct: 875 HYLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYT 920
>UNIPROTKB|E2R5U9 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:AAEX03004823
Ensembl:ENSCAFT00000035369 Uniprot:E2R5U9
Length = 1466
Score = 174 (66.3 bits), Expect = 2.6e-14, Sum P(4) = 2.6e-14
Identities = 38/98 (38%), Positives = 55/98 (56%)
Query: 742 RVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+++ +L G+A HHAG+ ++V+E F G + VLF+T T AMGVN PA VV +
Sbjct: 575 KLRDILIHGVAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTM 634
Query: 802 KFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCR 839
+ G F + + QM GRAGR D T V++ R
Sbjct: 635 HYAGGMFEEYSETDILQMIGRAGRPQFDTTATAVIMTR 672
Score = 131 (51.2 bits), Expect = 2.6e-14, Sum P(4) = 2.6e-14
Identities = 51/154 (33%), Positives = 74/154 (48%)
Query: 396 DFPFELDNFQKEAIYYLENGDSVFV-AAHTSAGKTVVAEYAFALATKHCT------RAVY 448
+FP+ + Q +A L D FV A T +GKTVV E A + VY
Sbjct: 279 EFPY-FNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLMEVPLPWSNIKIVY 337
Query: 449 TAPIKTISNQKYRDFSGKFD-VGL----LTGDVSLRP----EASCLIMTT-EILRSML-- 496
APIK + +Q++ D+ KF +GL LTGD + + + +IMTT E SM
Sbjct: 338 MAPIKALCSQRFDDWKEKFGPIGLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRK 397
Query: 497 YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVI 530
+R +++ + + DEVH V D RG E V+
Sbjct: 398 WRDNSLVQLVRLFLIDEVHVVKDENRGPTLEVVV 431
Score = 81 (33.6 bits), Expect = 2.4e-09, Sum P(4) = 2.4e-09
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 482 ASCLIMTTEILRSML--YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIML------ 533
A ++ T E SM +R +++ + + DEVH V D RG E V+ +
Sbjct: 381 AHIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQSL 440
Query: 534 -PRHIN-------IVLLSATVPNTVEFADWIGRTKQKKIRVTGTTK-RPVPLE 577
P N V +SAT+PN + A+W+ ++ + + K RPV L+
Sbjct: 441 SPPSENSTVIPMRFVAVSATIPNAEDIAEWLSDGERPAVCLKMDEKHRPVKLQ 493
Score = 40 (19.1 bits), Expect = 2.6e-14, Sum P(4) = 2.6e-14
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 1123 NLVEAYYKWAGLLRKMAANKCHGCIKLEEHMKLTKE 1158
+ V K+A LL + KC C E + ++K+
Sbjct: 898 DFVAVQEKFAILLNSLILAKCFRCKLWENSLHVSKQ 933
Score = 37 (18.1 bits), Expect = 2.6e-14, Sum P(4) = 2.6e-14
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 1246 VFQQRNTSEPSLTPKLSVAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKFG 1299
V Q+ T EP+++ LS + R N L ++ K+Q++ D +FG
Sbjct: 1162 VAQKSETKEPTISSYLSDLRNR--NAVSSLPPVK-RLKMQMNKSRSV-DLKEFG 1211
>MGI|MGI:1925237 [details] [associations]
symbol:Ascc3 "activating signal cointegrator 1 complex
subunit 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0032508 "DNA duplex unwinding" evidence=ISO] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 MGI:MGI:1925237 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:10973 GeneTree:ENSGT00700000104562 KO:K01529
OMA:FPGKHYC GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AC137877 EMBL:AC153529
EMBL:AC159114 EMBL:BC032189 EMBL:BC059917 EMBL:AK021027
EMBL:AK052745 IPI:IPI00553687 RefSeq:NP_932124.2 UniGene:Mm.222497
PRIDE:E9PZJ8 Ensembl:ENSMUST00000035606 GeneID:77987 KEGG:mmu:77987
HOGENOM:HOG000157749 NextBio:347945 Bgee:E9PZJ8 Uniprot:E9PZJ8
Length = 2198
Score = 159 (61.0 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 49/156 (31%), Positives = 73/156 (46%)
Query: 687 PVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSL 746
PV+IF S+ A + T K + + ++ + G+ R+ ++
Sbjct: 1558 PVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMD-EQEMDNIIGTVRDS----NLKLT 1612
Query: 747 LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGR 806
L GI +HHAGL ++ +E LF V+VL +T T A GVN PA V+ +DG+
Sbjct: 1613 LAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGK 1672
Query: 807 EFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCRD 840
R + P + QM GRAGR D G V+L D
Sbjct: 1673 TRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHD 1708
Score = 156 (60.0 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 38/104 (36%), Positives = 56/104 (53%)
Query: 742 RVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+V+ L G +IHHAG+L + ++E LF G +KVL T T A GVN PA VV +
Sbjct: 771 QVRELFSDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVVIKGTQ 830
Query: 802 KFDGRE--FRQLLPGEYTQMAGRAGRRGLDKIGT-VVVLCRDEI 842
+ + F L + Q+ GRAGR DK G +++ D++
Sbjct: 831 IYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKL 874
Score = 127 (49.8 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 45/143 (31%), Positives = 77/143 (53%)
Query: 405 QKEAIYYLENGD-SVFVAAHTSAGKTVVAEYA-FALATKHCT-RAVYTAPIKTISNQKYR 461
Q + + L + D +V + A T +GKTV AE A F + K+ T +AVY AP+K + ++
Sbjct: 1332 QTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMD 1391
Query: 462 DFSGKFDVGL------LTGDVS--LRPEASC-LIMTTE-----ILRSMLYRGADIIRDIE 507
D+ + + L LTGDV+ ++ A LI+TT + RS ++ ++ +
Sbjct: 1392 DWKIRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRS--WQNRSYVQQVN 1449
Query: 508 WVIFDEVHYVNDIERGVVWEEVI 530
+I DE+H + + ERG V E ++
Sbjct: 1450 ILIIDEIHLLGE-ERGPVLEVIV 1471
Score = 109 (43.4 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 41/132 (31%), Positives = 66/132 (50%)
Query: 472 LTGDVS--LRPEASC-LIMTTE-----ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERG 523
LTGDV+ ++ A LI+TT + RS ++ ++ + +I DE+H + + ERG
Sbjct: 1408 LTGDVTPDMKSIAKADLIVTTPEKWDGVSRS--WQNRSYVQQVNILIIDEIHLLGE-ERG 1464
Query: 524 VVWEEVII---MLPRH----INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ + H + IV LS + N + ADW+ KQ + + RPVPL
Sbjct: 1465 PVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLN-IKQMGLFNFRPSVRPVPL 1523
Query: 577 E-HCLYYSGEFY 587
E H + G+ Y
Sbjct: 1524 EVHIQGFPGQHY 1535
Score = 84 (34.6 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 36/144 (25%), Positives = 73/144 (50%)
Query: 416 DSVFVAAHTSAGKTVVA----------EYAFALATKHCTRAVYTAPIKTISNQKYRDFSG 465
+++ + A T AGKT +A + + K+ + VY AP+K ++ + FS
Sbjct: 494 ENMLICAPTGAGKTNIAMLTILHEIRQHFHQGVIKKNEFKIVYVAPMKALAAEMTNYFSK 553
Query: 466 KFD-VGL----LTGDVSL-RPEA--SCLIMTTEILRSMLYRGA--DIIRD--IEWVIFDE 513
+ + +G+ LTGD+ L + E + +++TT ++ R + D+ ++ +I DE
Sbjct: 554 RLEPLGIVVKELTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDE 613
Query: 514 VHYVNDIERGVVWEEVIIMLPRHI 537
VH +++ +RG V E ++ R +
Sbjct: 614 VHLLHE-DRGPVLESIVARTLRQV 636
Score = 75 (31.5 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 34/119 (28%), Positives = 60/119 (50%)
Query: 472 LTGDVSL-RPEA--SCLIMTTEILRSMLYRGA--DIIRD--IEWVIFDEVHYVNDIERGV 524
LTGD+ L + E + +++TT ++ R + D+ ++ +I DEVH +++ +RG
Sbjct: 565 LTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGP 623
Query: 525 VWEEVIIMLPRH-------INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ R I I+ LSAT+PN ++ A ++ + RPVPL
Sbjct: 624 VLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVPL 682
Score = 51 (23.0 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 24/96 (25%), Positives = 45/96 (46%)
Query: 1075 KIDQVGLLEDVSSAA--FSKTVQQLLVLKSDEKKYPQALDPVKDL-KLKDMNLVEAYYKW 1131
++D L+ D + A ++ V+ L + K++P + +L K+ D L + W
Sbjct: 1070 EMDSFSLISDSAYVAQNAARIVRALFEIAL-RKRWPTMTYRLLNLSKVIDKRL----WGW 1124
Query: 1132 AGLLRKMAANKCHGCIKLEE-HMKLTKENKRHKDEV 1166
A LR+ + H +LEE ++ + K KDE+
Sbjct: 1125 ASPLRQFSVLPPHILTRLEEKNLTVDKLKDMRKDEI 1160
Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 515 HYVNDI-ERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRT 559
HY++ + ++ + + + L ++N + TV N E W+ T
Sbjct: 876 HYLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVRWMSYT 921
>UNIPROTKB|Q8N3C0 [details] [associations]
symbol:ASCC3 "Activating signal cointegrator 1 complex
subunit 3" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006307 "DNA dealkylation
involved in DNA repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=IDA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006307
GO:GO:0008283 EMBL:CH471051 GO:GO:0006351 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 CTD:10973
KO:K01529 OMA:FPGKHYC GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AL834463 EMBL:AK315197
EMBL:AL591585 EMBL:AL121965 EMBL:AL133338 EMBL:AL356122 EMBL:Z86062
EMBL:BC050681 EMBL:BC125211 EMBL:BC125212 EMBL:BC026066
EMBL:AY013288 EMBL:AJ223948 IPI:IPI00430472 RefSeq:NP_006819.2
RefSeq:NP_071374.1 UniGene:Hs.486031 ProteinModelPortal:Q8N3C0
SMR:Q8N3C0 IntAct:Q8N3C0 MINT:MINT-1183138 STRING:Q8N3C0
PhosphoSite:Q8N3C0 DMDM:158518649 PaxDb:Q8N3C0 PRIDE:Q8N3C0
DNASU:10973 Ensembl:ENST00000369143 Ensembl:ENST00000369162
Ensembl:ENST00000522650 GeneID:10973 KEGG:hsa:10973 UCSC:uc003pqk.3
GeneCards:GC06M100956 H-InvDB:HIX0021958 HGNC:HGNC:18697
HPA:HPA031608 HPA:HPA031609 HPA:HPA031610 MIM:614217
neXtProt:NX_Q8N3C0 PharmGKB:PA134890913 eggNOG:COG1204
HOGENOM:HOG000152625 HOVERGEN:HBG051896 InParanoid:Q8N3C0
PhylomeDB:Q8N3C0 ChiTaRS:ASCC3 GenomeRNAi:10973 NextBio:41694
ArrayExpress:Q8N3C0 Bgee:Q8N3C0 CleanEx:HS_ASCC3
Genevestigator:Q8N3C0 GermOnline:ENSG00000112249 Uniprot:Q8N3C0
Length = 2202
Score = 158 (60.7 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 43/110 (39%), Positives = 57/110 (51%)
Query: 736 NLPQIVRVQSL---LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPA 792
N+ VR +L L GI +HHAGL ++ +E LF V+VL +T T A GVN PA
Sbjct: 1598 NIIATVRDSNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPA 1657
Query: 793 RTVVFDNLRKFDGREFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCRD 840
V+ +DG+ R + P + QM GRAGR D G V+L D
Sbjct: 1658 HLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHD 1707
Score = 155 (59.6 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 43/126 (34%), Positives = 63/126 (50%)
Query: 742 RVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+V+ L G +IHHAG+L + ++E LF G +KVL T T A GVN PA V+ +
Sbjct: 770 QVRELFPDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQ 829
Query: 802 KFDGRE--FRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATR- 858
+ + F L + Q+ GRAGR DK G +++ + L H + R
Sbjct: 830 IYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHD-----KLSHYLTLLTQRN 884
Query: 859 -LESQF 863
+ESQF
Sbjct: 885 PIESQF 890
Score = 128 (50.1 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 45/143 (31%), Positives = 78/143 (54%)
Query: 405 QKEAIYYLENGD-SVFVAAHTSAGKTVVAEYA-FALATKHCT-RAVYTAPIKTISNQKYR 461
Q + + L + D +V + A T +GKTV AE A F + K+ T +AVY AP+K + ++
Sbjct: 1331 QTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMD 1390
Query: 462 DFSGKFDVGL------LTGDVS--LRPEASC-LIMTTE-----ILRSMLYRGADIIRDIE 507
D+ + + L LTGDV+ ++ A LI+TT + RS ++ + ++ +
Sbjct: 1391 DWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRS--WQNRNYVQQVT 1448
Query: 508 WVIFDEVHYVNDIERGVVWEEVI 530
+I DE+H + + ERG V E ++
Sbjct: 1449 ILIIDEIHLLGE-ERGPVLEVIV 1470
Score = 109 (43.4 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 41/132 (31%), Positives = 67/132 (50%)
Query: 472 LTGDVS--LRPEASC-LIMTTE-----ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERG 523
LTGDV+ ++ A LI+TT + RS ++ + ++ + +I DE+H + + ERG
Sbjct: 1407 LTGDVTPDMKSIAKADLIVTTPEKWDGVSRS--WQNRNYVQQVTILIIDEIHLLGE-ERG 1463
Query: 524 VVWEEVII---MLPRH----INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ + H + IV LS + N + ADW+ KQ + + RPVPL
Sbjct: 1464 PVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLN-IKQMGLFNFRPSVRPVPL 1522
Query: 577 E-HCLYYSGEFY 587
E H + G+ Y
Sbjct: 1523 EVHIQGFPGQHY 1534
Score = 74 (31.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 34/119 (28%), Positives = 59/119 (49%)
Query: 472 LTGDVSL-RPEA--SCLIMTTEILRSMLYRGA--DIIRD--IEWVIFDEVHYVNDIERGV 524
LTGD+ L + E + +++TT ++ R + D+ + +I DEVH +++ +RG
Sbjct: 564 LTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVRLLILDEVHLLHE-DRGP 622
Query: 525 VWEEVIIMLPRH-------INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ R I I+ LSAT+PN ++ A ++ + RPVPL
Sbjct: 623 VLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFFFDGRFRPVPL 681
Score = 57 (25.1 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 24/92 (26%), Positives = 45/92 (48%)
Query: 416 DSVFVAAHTSAGKTVVA----------EYAFALATKHCTRAVYTAPIKTISNQKYRDFSG 465
+++ + A T AGKT +A + + K+ + VY AP+K ++ + FS
Sbjct: 493 ENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPMKALAAEMTDYFSR 552
Query: 466 KFD-VGL----LTGDVSLRPEASCLIMTTEIL 492
+ + +G+ LTGD+ L I+ T++L
Sbjct: 553 RLEPLGIIVKELTGDMQLSKSE---ILRTQML 581
Score = 47 (21.6 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 515 HYVNDI-ERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRT 559
HY+ + +R + + + L ++N + TV N E WI T
Sbjct: 875 HYLTLLTQRNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYT 920
>UNIPROTKB|A6NGI5 [details] [associations]
symbol:HFM1 "Probable ATP-dependent DNA helicase HFM1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00973
GO:GO:0008026 EMBL:BX323048 EMBL:AC098691 HGNC:HGNC:20193
HOGENOM:HOG000293238 HOVERGEN:HBG103774 ChiTaRS:HFM1
IPI:IPI00852573 ProteinModelPortal:A6NGI5 STRING:A6NGI5
Ensembl:ENST00000370424 ArrayExpress:A6NGI5 Bgee:A6NGI5
Uniprot:A6NGI5
Length = 1114
Score = 172 (65.6 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 38/98 (38%), Positives = 55/98 (56%)
Query: 742 RVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+++ +L+ G A HHAG+ ++V+E F G + VLF+T T AMGVN PA VV +
Sbjct: 253 KLRDILKDGAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTM 312
Query: 802 KFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCR 839
+ G F + + QM GRAGR D T V++ R
Sbjct: 313 HYAGGLFEEYSETDILQMIGRAGRPQFDTTATAVIMTR 350
Score = 112 (44.5 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 39/117 (33%), Positives = 60/117 (51%)
Query: 445 RAVYTAPIKTISNQKYRDFSGKFD-VGL----LTGDVSLRP----EASCLIMTT-EILRS 494
+ VY APIK + +Q++ D+ KF +GL LTGD + + + +IMTT E S
Sbjct: 11 KIVYMAPIKALCSQRFDDWKEKFGPIGLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDS 70
Query: 495 ML--YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNT 549
M +R +++ + + DEVH V D RG E V+ R + +S T+ NT
Sbjct: 71 MTRKWRDNSLVQLVRLFLIDEVHIVKDENRGPTLEVVV---SRMKTVQSVSQTLKNT 124
Score = 71 (30.1 bits), Expect = 7.0e-10, Sum P(3) = 7.0e-10
Identities = 23/97 (23%), Positives = 43/97 (44%)
Query: 497 YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPR---------------HINIVL 541
+R +++ + + DEVH V D RG E V+ + + V
Sbjct: 75 WRDNSLVQLVRLFLIDEVHIVKDENRGPTLEVVVSRMKTVQSVSQTLKNTSTAIPMRFVA 134
Query: 542 LSATVPNTVEFADWIGRTKQKKIRVT-GTTKRPVPLE 577
+SAT+PN + A+W+ ++ + + + RPV L+
Sbjct: 135 VSATIPNAEDIAEWLSDGERPAVCLKMDESHRPVKLQ 171
Score = 44 (20.5 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 24/97 (24%), Positives = 43/97 (44%)
Query: 1032 VSHRKGSGVINIKLPYHGAAAGV---SYEVRGIDKKELLC--ICNCKIKIDQVGLLEDVS 1086
+SH K S + I P G A + E + K + C C CKI + Q +++ +
Sbjct: 793 ISHSKHSDISTIAGPNKGTTASKKPGNRECNHLCKSKHTCGHDC-CKIGVAQKSEIKEST 851
Query: 1087 SAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDMN 1123
+++ ++ + S + PVK LK++ MN
Sbjct: 852 ISSYLSDLRNRNAVSS--------VPPVKRLKIQ-MN 879
Score = 40 (19.1 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 1130 KWAGLLRKMAANKCHGCIKLEEHMKLTKE 1158
K+A LL + KC C E + ++K+
Sbjct: 584 KFAVLLNSLILAKCFRCKLWENSLHVSKQ 612
>RGD|1307995 [details] [associations]
symbol:Ascc3 "activating signal cointegrator 1 complex subunit
3" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 RGD:1307995 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 IPI:IPI01016410 UniGene:Rn.24209
Ensembl:ENSRNOT00000057016 UCSC:RGD:1307995
GeneTree:ENSGT00640000091272 ArrayExpress:F1LPQ2 Uniprot:F1LPQ2
Length = 2197
Score = 158 (60.7 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 43/110 (39%), Positives = 57/110 (51%)
Query: 736 NLPQIVRVQSL---LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPA 792
N+ VR +L L GI +HHAGL ++ +E LF V+VL +T T A GVN PA
Sbjct: 1598 NIIATVRDSNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPA 1657
Query: 793 RTVVFDNLRKFDGREFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCRD 840
V+ +DG+ R + P + QM GRAGR D G V+L D
Sbjct: 1658 HLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHD 1707
Score = 155 (59.6 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 37/104 (35%), Positives = 56/104 (53%)
Query: 742 RVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+V+ L G +IHHAG+L + ++E LF G +KVL T T A GVN PA V+ +
Sbjct: 771 QVRELFSDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQ 830
Query: 802 KFDGRE--FRQLLPGEYTQMAGRAGRRGLDKIGT-VVVLCRDEI 842
+ + F L + Q+ GRAGR DK G +++ D++
Sbjct: 831 IYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKL 874
Score = 127 (49.8 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 45/143 (31%), Positives = 77/143 (53%)
Query: 405 QKEAIYYLENGD-SVFVAAHTSAGKTVVAEYA-FALATKHCT-RAVYTAPIKTISNQKYR 461
Q + + L + D +V + A T +GKTV AE A F + K+ T +AVY AP+K + ++
Sbjct: 1332 QTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMD 1391
Query: 462 DFSGKFDVGL------LTGDVS--LRPEASC-LIMTTE-----ILRSMLYRGADIIRDIE 507
D+ + + L LTGDV+ ++ A LI+TT + RS ++ ++ +
Sbjct: 1392 DWKIRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRS--WQNRSYVQQVN 1449
Query: 508 WVIFDEVHYVNDIERGVVWEEVI 530
+I DE+H + + ERG V E ++
Sbjct: 1450 ILIIDEIHLLGE-ERGPVLEVIV 1471
Score = 109 (43.4 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 41/132 (31%), Positives = 66/132 (50%)
Query: 472 LTGDVS--LRPEASC-LIMTTE-----ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERG 523
LTGDV+ ++ A LI+TT + RS ++ ++ + +I DE+H + + ERG
Sbjct: 1408 LTGDVTPDMKSIAKADLIVTTPEKWDGVSRS--WQNRSYVQQVNILIIDEIHLLGE-ERG 1464
Query: 524 VVWEEVII---MLPRH----INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ + H + IV LS + N + ADW+ KQ + + RPVPL
Sbjct: 1465 PVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLN-IKQMGLFNFRPSVRPVPL 1523
Query: 577 E-HCLYYSGEFY 587
E H + G+ Y
Sbjct: 1524 EVHIQGFPGQHY 1535
Score = 84 (34.6 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 36/144 (25%), Positives = 73/144 (50%)
Query: 416 DSVFVAAHTSAGKTVVA----------EYAFALATKHCTRAVYTAPIKTISNQKYRDFSG 465
+++ + A T AGKT +A + + K+ + VY AP+K ++ + FS
Sbjct: 494 ENMLICAPTGAGKTNIAMLTVLHEIRQHFHQGVLKKNEFKIVYVAPMKALAAEMTNYFSK 553
Query: 466 KFD-VGL----LTGDVSL-RPEA--SCLIMTTEILRSMLYRGA--DIIRD--IEWVIFDE 513
+ + +G+ LTGD+ L + E + +++TT ++ R + D+ ++ +I DE
Sbjct: 554 RLEPLGIVVKELTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDE 613
Query: 514 VHYVNDIERGVVWEEVIIMLPRHI 537
VH +++ +RG V E ++ R +
Sbjct: 614 VHLLHE-DRGPVLESIVARTLRQV 636
Score = 75 (31.5 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 34/119 (28%), Positives = 60/119 (50%)
Query: 472 LTGDVSL-RPEA--SCLIMTTEILRSMLYRGA--DIIRD--IEWVIFDEVHYVNDIERGV 524
LTGD+ L + E + +++TT ++ R + D+ ++ +I DEVH +++ +RG
Sbjct: 565 LTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGP 623
Query: 525 VWEEVIIMLPRH-------INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ R I I+ LSAT+PN ++ A ++ + RPVPL
Sbjct: 624 VLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVPL 682
Score = 51 (23.0 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 24/96 (25%), Positives = 45/96 (46%)
Query: 1075 KIDQVGLLEDVSSAA--FSKTVQQLLVLKSDEKKYPQALDPVKDL-KLKDMNLVEAYYKW 1131
++D L+ D + A ++ V+ L + K++P + +L K+ D L + W
Sbjct: 1070 EMDSFSLISDSAYVAQNAARIVRALFEIAL-RKRWPTMTYRLLNLSKVIDKRL----WGW 1124
Query: 1132 AGLLRKMAANKCHGCIKLEE-HMKLTKENKRHKDEV 1166
A LR+ + H +LEE ++ + K KDE+
Sbjct: 1125 ASPLRQFSVLPPHILTRLEEKNLTVDKLKDMRKDEI 1160
Score = 41 (19.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 515 HYVNDI-ERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRT 559
HY++ + ++ + + + L ++N + TV N E W+ T
Sbjct: 876 HYLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWMSYT 921
>WB|WBGene00013189 [details] [associations]
symbol:Y54E2A.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 HOGENOM:HOG000157749 GeneTree:ENSGT00640000091272
GO:GO:0008026 EMBL:AL032646 RefSeq:NP_497060.2
ProteinModelPortal:Q9XWI1 SMR:Q9XWI1 PaxDb:Q9XWI1
EnsemblMetazoa:Y54E2A.4 GeneID:190256 KEGG:cel:CELE_Y54E2A.4
UCSC:Y54E2A.4 CTD:190256 WormBase:Y54E2A.4 Uniprot:Q9XWI1
Length = 2017
Score = 169 (64.5 bits), Expect = 8.5e-11, Sum P(4) = 8.5e-11
Identities = 58/185 (31%), Positives = 90/185 (48%)
Query: 688 VVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFC--DKAFSRLKGSDRNLPQIVR--- 742
V++F ++N KL + +S ++ +F D+A S+ +D+ + I R
Sbjct: 555 VLVFVHTRNGTAKLGEAFCA----RASVLGQMDLFLPKDRASSKYIQADKAI-NICRNRA 609
Query: 743 -VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+ L +RG+ IHHAGL + ++E F G V VLF T T A GVN PA VV
Sbjct: 610 QISPLFQRGMGIHHAGLCRQDRILMERCFAEGHVSVLFCTATLAWGVNLPAHAVVIKGTD 669
Query: 802 KFDGRE--FRQLLPGEYTQMAGRAGRRGLDKIGT-VVVLCRDEIPGESDLKHIIVGSATR 858
FD + F L + Q+ GRAGR + G +++ RD+I + L ++
Sbjct: 670 VFDAEKGVFTDLGVLDVQQIFGRAGRPQFENEGHGIIITTRDKI--DKYLTMLV--HQNP 725
Query: 859 LESQF 863
+ESQF
Sbjct: 726 IESQF 730
Score = 155 (59.6 bits), Expect = 6.2e-14, Sum P(4) = 6.2e-14
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 750 GIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGREFR 809
GI +HHAGL + ++E LF ++VL +T T A G+N PA V+ FDG++ +
Sbjct: 1471 GIGMHHAGLSAHERAIVEQLFIEKKIQVLIATATLAWGINCPAHLVIVKGTEYFDGKKGK 1530
Query: 810 QL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCRD 840
+ P + QM GRAGR D V+ +D
Sbjct: 1531 YVDFPVTDVLQMMGRAGRPQFDDSAVAVIYVQD 1563
Score = 150 (57.9 bits), Expect = 6.2e-14, Sum P(4) = 6.2e-14
Identities = 49/155 (31%), Positives = 81/155 (52%)
Query: 397 FPFELDN-FQKEAIYYLENGD-SVFVAAHTSAGKTVVAEYA-FALATKHC-TRAVYTAPI 452
+ F+ N Q + + L D S + A T +GKT+ AE A F L H + VY AP+
Sbjct: 1175 YNFDYFNPIQAQVFFCLYKTDKSALIGAPTGSGKTLCAELAMFRLLQDHPGMKVVYIAPL 1234
Query: 453 KTISNQKYRDFSGKFDVGL------LTGDVSLRPE---ASCLIMTTE-----ILRSMLYR 498
K++ ++ D+ KF+ G+ ++GDV+ PE AS +++TT I RS R
Sbjct: 1235 KSLVRERVDDWKKKFEDGMGYRVVEVSGDVTPDPEELAASSILITTPEKWDGISRSWATR 1294
Query: 499 GADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIML 533
+ +R + ++ DEVH + ++RG V E ++ L
Sbjct: 1295 --EYVRRVGLIVLDEVHLLG-VDRGAVLEAIVSRL 1326
Score = 108 (43.1 bits), Expect = 5.3e-09, Sum P(5) = 5.3e-09
Identities = 42/149 (28%), Positives = 74/149 (49%)
Query: 458 QKYRDFSGKFDVGLLTGDVSLRPE---ASCLIMTTE-----ILRSMLYRGADIIRDIEWV 509
+K+ D G + V ++GDV+ PE AS +++TT I RS R + +R + +
Sbjct: 1247 KKFEDGMG-YRVVEVSGDVTPDPEELAASSILITTPEKWDGISRSWATR--EYVRRVGLI 1303
Query: 510 IFDEVHYVNDIERGVVWEEVII---MLPR--HIN-----IVLLSATVPNTVEFADWIGRT 559
+ DEVH + ++RG V E ++ M+ R H+ ++ LS + N + A+W+G
Sbjct: 1304 VLDEVHLLG-VDRGAVLEAIVSRLKMITRRSHVTEEPVRLLGLSTALANAGDVAEWLGIP 1362
Query: 560 KQKKIRVTGTTKRPVPLE-HCLYYSGEFY 587
+ + RPVP+ H + G+ Y
Sbjct: 1363 DEACYNFRPSV-RPVPISVHIQGFPGQHY 1390
Score = 99 (39.9 bits), Expect = 8.5e-11, Sum P(4) = 8.5e-11
Identities = 39/119 (32%), Positives = 57/119 (47%)
Query: 472 LTGDVSL-RPEAS---CLIMTTE---ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGV 524
LTGD L R E + L++T E ++ +I + +I DEVH ++D ERG
Sbjct: 400 LTGDTQLSRNEVADTQMLVLTPEKWDVITRKSTSDNSLINVVRLLIIDEVHLLHD-ERGP 458
Query: 525 VWEEVIIMLPRH-------INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ R I IV LSAT+PN ++ A ++ K + RPVPL
Sbjct: 459 VIETLVARTLRQVEMSQSGIRIVGLSATLPNFIDVARFLRVNPYKGLFFFDGRFRPVPL 517
Score = 48 (22.0 bits), Expect = 8.5e-11, Sum P(4) = 8.5e-11
Identities = 23/80 (28%), Positives = 36/80 (45%)
Query: 416 DSVFVAAHTSAGKTVVAEYAFALATKH---CTRA---------VYTAPIKTISNQKYRDF 463
+++ + A T AGKT +A L T H +R +Y AP+K ++ + F
Sbjct: 328 ENLLICAPTGAGKTNIAMLTI-LNTIHEHQNSRGDIMKDDFKIIYIAPMKALATEMTESF 386
Query: 464 SGKF-DVGL----LTGDVSL 478
+ +GL LTGD L
Sbjct: 387 GKRLAPLGLKVKELTGDTQL 406
Score = 43 (20.2 bits), Expect = 6.2e-14, Sum P(4) = 6.2e-14
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 209 DLGELQAYPCLWNV 222
DL EL +Y C+ NV
Sbjct: 882 DLEELMSYGCMMNV 895
Score = 43 (20.2 bits), Expect = 5.3e-09, Sum P(5) = 5.3e-09
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 401 LDNF-QKEAIYYLENGDSVFVAAHTSAGKTVVAEYAF 436
+DN E + +++ G V V HT G + E AF
Sbjct: 537 MDNVCYDEVVDFVKRGHQVLVFVHTRNGTAKLGE-AF 572
Score = 41 (19.5 bits), Expect = 9.7e-14, Sum P(4) = 9.7e-14
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 199 VVPPSFKQGLDLGELQAYP 217
++P SFK DL +L+ P
Sbjct: 1144 ILPKSFKSHTDLLDLEPLP 1162
Score = 40 (19.1 bits), Expect = 1.2e-13, Sum P(4) = 1.2e-13
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 1 MNRIQATNELAFRVGFSG----HSGHLRVEPLYTVEDRTDPIKSLPDFILPPAFPRET 54
+NR Q T L F + ++ LR+ Y V D SL + ILP +F T
Sbjct: 1097 VNR-QETQNLVFTIPIVDCQLTNNFQLRLASEYFVTDDVVVPMSLHNCILPKSFKSHT 1153
Score = 37 (18.1 bits), Expect = 6.2e-14, Sum P(4) = 6.2e-14
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 1279 QAHFKVQIDPEEYARDNLK 1297
QAHF + P +Y R +LK
Sbjct: 1752 QAHFMRTVLPTDY-RTDLK 1769
Score = 37 (18.1 bits), Expect = 5.3e-09, Sum P(5) = 5.3e-09
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 451 PIKTISNQKY 460
PIKT+ N K+
Sbjct: 1162 PIKTLKNSKF 1171
>FB|FBgn0038344 [details] [associations]
symbol:CG5205 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005682 "U5 snRNP"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0006200 GO:GO:0005682 GO:GO:0003676
GO:GO:0004386 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104562 KO:K01529 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
GO:GO:0008026 GO:GO:0016779 FlyBase:FBgn0038344 RefSeq:NP_650472.2
UniGene:Dm.1213 ProteinModelPortal:Q9VF56 SMR:Q9VF56
EnsemblMetazoa:FBtr0083147 GeneID:41891 KEGG:dme:Dmel_CG5205
UCSC:CG5205-RA InParanoid:Q9VF56 PhylomeDB:Q9VF56 GenomeRNAi:41891
NextBio:826131 ArrayExpress:Q9VF56 Bgee:Q9VF56 Uniprot:Q9VF56
Length = 2183
Score = 171 (65.3 bits), Expect = 1.5e-13, Sum P(4) = 1.5e-13
Identities = 44/108 (40%), Positives = 59/108 (54%)
Query: 739 QIVRVQSL---LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
Q +R Q+L L GI +HHAGL ++ +E LF +++L +T T A GVN PA V
Sbjct: 1612 QNIREQNLKFCLAFGIGLHHAGLQEQDRKCVEELFLNRKIQILVATATLAWGVNLPAHLV 1671
Query: 796 VFDNLRKFDGREFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCRDE 841
V FDG+ + + +P + QM GRAGR D G VVL DE
Sbjct: 1672 VIKGTEYFDGKVKKYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDE 1719
Score = 149 (57.5 bits), Expect = 6.3e-10, Sum P(5) = 6.3e-10
Identities = 43/152 (28%), Positives = 74/152 (48%)
Query: 688 VVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLL 747
+++F ++N + A+ + +L + S + + D A L + ++ L
Sbjct: 728 IMVFVHARNATVRTANVIR--ELAQQNNTSALFLPKDSAAHGLATRSIQRSRNKQLVELF 785
Query: 748 RRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGRE 807
G+A+HHAG+L ++++E F G + VL T T A GVN PA V+ +D +
Sbjct: 786 SCGLAMHHAGMLRADRQMVEKYFVEGHISVLVCTATLAWGVNLPAHAVIIRGTDIYDAKH 845
Query: 808 --FRQLLPGEYTQMAGRAGRRGLDK--IGTVV 835
F L + Q+ GRAGR DK +GT++
Sbjct: 846 GSFVDLGILDVLQIFGRAGRPQFDKSGVGTII 877
Score = 129 (50.5 bits), Expect = 1.5e-13, Sum P(4) = 1.5e-13
Identities = 42/137 (30%), Positives = 73/137 (53%)
Query: 409 IYYLENGDSVFVAAHTSAGKTVVAEYAF--ALATKHCTRAVYTAPIKTISNQKYRDFSGK 466
+Y+ +N +V + A T +GKT+VAE A AL + VY AP+K + ++ D+ +
Sbjct: 1348 LYHTDN--NVLLGAPTGSGKTIVAEIAIFRALNQNPKCKVVYIAPLKALVKERIADWEQR 1405
Query: 467 FD---VGL----LTGDVSLRPEA---SCLIMTTEILRSMLYRG---ADIIRDIEWVIFDE 513
F +GL LTGDV+ +A S LI+TT + R + ++ + ++ DE
Sbjct: 1406 FQRSSLGLKVVELTGDVTPDIQAIRESQLIVTTPEKWDGISRSWQTREYVQHVSLIVIDE 1465
Query: 514 VHYVNDIERGVVWEEVI 530
+H + + +RG V E ++
Sbjct: 1466 IHLLGE-DRGPVIEVIV 1481
Score = 107 (42.7 bits), Expect = 2.4e-11, Sum P(4) = 2.4e-11
Identities = 44/146 (30%), Positives = 71/146 (48%)
Query: 458 QKYRDFSGKFDVGLLTGDVSLRPEA---SCLIMTTE-----ILRSMLYRGADIIRDIEWV 509
Q+++ S V LTGDV+ +A S LI+TT I RS R + ++ + +
Sbjct: 1404 QRFQRSSLGLKVVELTGDVTPDIQAIRESQLIVTTPEKWDGISRSWQTR--EYVQHVSLI 1461
Query: 510 IFDEVHYVNDIERGVVWEEVII---MLPRH----INIVLLSATVPNTVEFADWIGRTKQK 562
+ DE+H + + +RG V E ++ + H I IV LS + N + A+W+G K
Sbjct: 1462 VIDEIHLLGE-DRGPVIEVIVSRTNFISSHTGRAIRIVGLSTALANAQDLANWLGINKMG 1520
Query: 563 KIRVTGTTKRPVPLE-HCLYYSGEFY 587
+ RPVPL+ H + G+ Y
Sbjct: 1521 LYNFKPSV-RPVPLQVHINGFPGKHY 1545
Score = 102 (41.0 bits), Expect = 7.6e-13, Sum P(4) = 7.6e-13
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 472 LTGDVSL-RPEASC---LIMTTEILRSMLYRGA-DI--IRDIEWVIFDEVHYVNDIERGV 524
LTGD+ L + E + L+ T E + +G+ D+ I +E +I DEVH ++ ERG
Sbjct: 574 LTGDIQLTKAEMAATQILVTTPEKWDVVTRKGSGDVALISLVELLIIDEVHLLHG-ERGP 632
Query: 525 VWEEVIIMLPR-------HINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLE 577
V E ++ R I IV LSAT+PN ++ A ++ K + + RPVPL+
Sbjct: 633 VVEALVARTLRLVESSQSMIRIVGLSATLPNYIDVAHFLRVNPMKGLFYFDSRFRPVPLD 692
Score = 59 (25.8 bits), Expect = 7.6e-13, Sum P(4) = 7.6e-13
Identities = 28/96 (29%), Positives = 43/96 (44%)
Query: 400 ELDNFQKEA--IYYLENGDSVFVAAHTSAGKTVVAEYAFALATK-HCTRAV--------- 447
EL+ Q + Y N +++ V A T AGKT VA + + H + V
Sbjct: 486 ELNRIQSVVFPVAYHSN-ENMLVCAPTGAGKTNVAMLSIVHTIRCHLEQGVINRDEFKIV 544
Query: 448 YTAPIKTISNQKYRDFSGKFD-----VGLLTGDVSL 478
Y AP+K ++ + +FS + V LTGD+ L
Sbjct: 545 YIAPMKALAAEMVDNFSKRLKSLQIAVRELTGDIQL 580
Score = 43 (20.2 bits), Expect = 1.5e-13, Sum P(4) = 1.5e-13
Identities = 20/85 (23%), Positives = 36/85 (42%)
Query: 1149 LEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADLVVQ--IK 1206
L+ H +++ + D + K + D A + M Q +D E G + LVVQ ++
Sbjct: 1904 LQAHF--ARQSLPNSDYLTDTKSAL-DNATRVM---QAMVDYTAERGWLSTTLVVQQLMQ 1957
Query: 1207 GRVACEMNSGEELICTECLFENQLD 1231
+ G E + + E+ LD
Sbjct: 1958 SVIQARWFDGSEFLTLPGVNEDNLD 1982
Score = 42 (19.8 bits), Expect = 5.3e-05, Sum P(4) = 5.3e-05
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 117 QTKQGKWEPNSVDVSELMLGAQDSGPLPRVAGPAKDFVRGSINSRPFRPGGL 168
QT++ + + + E+ L +D GP+ V +F+ S R R GL
Sbjct: 1450 QTREYVQHVSLIVIDEIHLLGEDRGPVIEVIVSRTNFI-SSHTGRAIRIVGL 1500
Score = 40 (19.1 bits), Expect = 3.1e-13, Sum P(4) = 3.1e-13
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 1229 QLDDLEPEEAVAIMSAFV 1246
QL D+EPE MS V
Sbjct: 1782 QLQDIEPENVNNFMSNLV 1799
Score = 39 (18.8 bits), Expect = 1.5e-13, Sum P(4) = 1.5e-13
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 83 RQWDFD 88
RQWDFD
Sbjct: 1129 RQWDFD 1134
Score = 39 (18.8 bits), Expect = 6.3e-10, Sum P(5) = 6.3e-10
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 898 LPEQQQLLMRKLAQPPKTIECIKGEPAIEEYYDMYYEAEKYNNQITEAF 946
LPE L L P + C+K Y+ Y+ +N T+ F
Sbjct: 1302 LPEHHPPLTELLPLRPLPVSCLKNV-----VYESLYKFTHFNPIQTQIF 1345
>UNIPROTKB|F1PXD9 [details] [associations]
symbol:POLQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 EMBL:AAEX03017021 Ensembl:ENSCAFT00000018256
OMA:NECHITF Uniprot:F1PXD9
Length = 1835
Score = 203 (76.5 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 59/166 (35%), Positives = 87/166 (52%)
Query: 688 VVIFCFSKNHCDKLADGMS---------GIDLTSSSEKSEIRVFCDKAF----SRLKGSD 734
V+IFC SK C+KLAD ++ L SSE + V K +LK S
Sbjct: 249 VLIFCPSKKWCEKLADIIACEFYNLHHQATGLVRSSELPPV-VLEQKGLLEVMDQLKRSP 307
Query: 735 RNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPART 794
L ++ Q + G+A HHAGL +++IE F +G ++VL +T T + GVN PAR
Sbjct: 308 SGLDSVL--QKTIPWGVAFHHAGLTFEERDIIEGAFRQGQIRVLAATSTLSSGVNLPARR 365
Query: 795 VVFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRD 840
V+ F G+ L Y QM GRAGR+G+D +G +++C++
Sbjct: 366 VII-RTPIFGGQPLDILT---YKQMVGRAGRKGVDTVGESILVCKN 407
Score = 75 (31.5 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 32/124 (25%), Positives = 56/124 (45%)
Query: 415 GDSVFVAAHTSAGKTVVAEYAFALATKHCTR-AVYTAPIKTISNQKYRDFSGKF-DVGL- 471
G ++ +A TSAGKT+VAE + A++ P +++ +K F ++G+
Sbjct: 17 GKNLVYSAPTSAGKTLVAELLMLKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEIGIN 76
Query: 472 ---LTGDVSLRPEASCL---IMTTEILRSMLYRGADIIR-DI-EWVIFDEVHYVNDIERG 523
G S S L + T E ++ R + + D+ V+ DE+H + D RG
Sbjct: 77 VDGYMGSTSPTGHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRG 136
Query: 524 VVWE 527
+ E
Sbjct: 137 YLLE 140
Score = 54 (24.1 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 17/55 (30%), Positives = 23/55 (41%)
Query: 533 LPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGEFY 587
L + IV +SAT+PN A W+ + T RPVPL + Y
Sbjct: 164 LSNAVQIVGMSATLPNLEIVASWLNA------ELYHTNFRPVPLLESVKIGNSIY 212
Score = 45 (20.9 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 1150 EEHMKLTKENKRHKDEV-NTLKFQMSD-EALQQMPDFQGRIDVLK-EIGCIDADLVVQIK 1206
+ + +T ++H V NT ++ E ++Q D G + +L E + ++++
Sbjct: 1272 QNEIHITFPGEQHSPGVTNTDHLELKTVETVKQDTDSHG-VGILTPESSIFHSPILLREN 1330
Query: 1207 GRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTS 1253
G C G EL T+ + L + +E V + V Q+R T+
Sbjct: 1331 G--PCF--KGSELSVTDSQLNSFLQGYQTQETVKPVMPLVPQKRATT 1373
Score = 39 (18.8 bits), Expect = 7.1e-13, Sum P(4) = 7.1e-13
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 1307 WAK-GTPFADICELTDVPEGLIVRTI 1331
W K T + EL V EG + R +
Sbjct: 582 WEKLPTSMKRVAELVGVEEGFLARCV 607
>UNIPROTKB|F1P0I1 [details] [associations]
symbol:F1P0I1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:QDCTYAD GeneTree:ENSGT00690000102154 EMBL:AADN02016399
IPI:IPI00595626 Ensembl:ENSGALT00000015699 Uniprot:F1P0I1
Length = 1313
Score = 154 (59.3 bits), Expect = 1.9e-13, Sum P(4) = 1.9e-13
Identities = 46/174 (26%), Positives = 78/174 (44%)
Query: 402 DNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAV--YTAPIKTISNQK 459
D +Q+E + ++N +S + A TS+GKT + Y K V Y AP K + NQ
Sbjct: 744 DTWQRELLDAVDNNESAVIVAPTSSGKTYASYYCMEKVLKMSDEGVVVYVAPTKALVNQV 803
Query: 460 ----YRDFSGKFDVGLLTGDVSLRP------EASCLIMTTEILRSMLY--RGADIIRDIE 507
Y F+ K GL+ V R + L+ + L ++ R + I+
Sbjct: 804 VGSVYSRFTKKLPDGLVVCGVFTRDYRHDVMNSQILVTVPQCLEILMLSPRCQSWTKRIQ 863
Query: 508 WVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQ 561
++IFDE+H + VWE +++ + + LSAT+ N +W+ K+
Sbjct: 864 YIIFDEIHCLGGEIGAEVWEHLLVTI--RCPFLALSATISNPDHLTEWLQSVKR 915
Score = 141 (54.7 bits), Expect = 1.9e-13, Sum P(4) = 1.9e-13
Identities = 34/88 (38%), Positives = 48/88 (54%)
Query: 725 KAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETF 784
K F RL+ R Q+L RRGI HH + ++ +EMLF G +KV+ +T T
Sbjct: 1228 KIFYRLRFQRRGYVH----QTLARRGIGYHHGAMAMKERQTVEMLFRLGYIKVVTATSTL 1283
Query: 785 AMGVNAPARTVVFDNLRKF-DGREFRQL 811
A+G+N P R+VVF F D +RQ+
Sbjct: 1284 ALGINMPCRSVVFAEDSVFLDALNYRQV 1311
Score = 39 (18.8 bits), Expect = 1.9e-13, Sum P(4) = 1.9e-13
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 551 EFADWIGRTKQKKIRVTGTTKRPVPLEHCLYY 582
E ++WI +++K+ +P P++ C Y
Sbjct: 1059 ELSNWIAVGQRQKVNEVLENLKPQPVD-CSEY 1089
Score = 38 (18.4 bits), Expect = 1.9e-13, Sum P(4) = 1.9e-13
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 668 SEVSIW---LTLINKLSKKSLLPVVIFCFSKNHCDKLA 702
SE W ++KL + LP + F F + + A
Sbjct: 1087 SEYEKWKRFARFVDKLHEMDKLPAIFFIFGLDSVENAA 1124
>POMBASE|SPAC9.03c [details] [associations]
symbol:brr2 "U5 snRNP complex subunit Brr2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000393 "spliceosomal
conformational changes to generate catalytic conformation"
evidence=IGI] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=IDA] [GO:0005682 "U5 snRNP" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISO] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 PomBase:SPAC9.03c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749 PIR:T39188
RefSeq:NP_593346.1 ProteinModelPortal:Q9UT24 IntAct:Q9UT24
STRING:Q9UT24 EnsemblFungi:SPAC9.03c.1 GeneID:2543676
KEGG:spo:SPAC9.03c KO:K12854 OMA:KWDVLSR OrthoDB:EOG4MD17F
NextBio:20804682 GO:GO:0046540 GO:GO:0004004 GO:GO:0000393
Uniprot:Q9UT24
Length = 2176
Score = 171 (65.3 bits), Expect = 2.4e-13, Sum P(4) = 2.4e-13
Identities = 54/180 (30%), Positives = 85/180 (47%)
Query: 688 VVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLL 747
V+IF S+ K A + L + +R D A + ++ + ++ LL
Sbjct: 760 VLIFVHSRKETAKTARFIRDKALEEETIGHLLR--SDAASREILRAEADSTSDENLKDLL 817
Query: 748 RRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGRE 807
G AIHHAG+ ++ E LF G ++VL ST T A GVN PA TV+ + + +
Sbjct: 818 PYGFAIHHAGMRREDRQTSEDLFADGTIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEK 877
Query: 808 --FRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHII--VGSATRLESQF 863
+ +L P + QM GRAGR D G ++ I S+L++ + + +ESQF
Sbjct: 878 GIWTELSPQDVLQMLGRAGRPQFDTYGEGII-----ITAHSELQYYLSLMNQQLPIESQF 932
Score = 117 (46.2 bits), Expect = 2.4e-13, Sum P(4) = 2.4e-13
Identities = 40/122 (32%), Positives = 64/122 (52%)
Query: 469 VGLLTGDVSLRPEA---SCLIMTTEILRSMLYRGA-DI--IRDIEWVIFDEVHYVNDIER 522
V LTGD L + + +I+TT ++ R A D+ + + VI DEVH ++D ER
Sbjct: 605 VAELTGDSQLTKQQISETQIIVTTPEKWDIITRKANDLSYVNLVRLVIIDEVHLLHD-ER 663
Query: 523 GVVWEEVIIMLPRH-------INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVP 575
G V E ++ + RH + +V LSAT+PN + A ++ +K + +T RP P
Sbjct: 664 GPVLESIVARIFRHQEETLEQVRLVGLSATLPNYTDVASFLHVDPKKGLFYFDSTYRPCP 723
Query: 576 LE 577
L+
Sbjct: 724 LK 725
Score = 112 (44.5 bits), Expect = 7.7e-05, Sum P(4) = 7.7e-05
Identities = 44/144 (30%), Positives = 72/144 (50%)
Query: 413 ENGDSVFVAAHTSAGKTVVAEYAFA--LATKHCTRAVYTAPIKTISNQKYRDFSGKF-DV 469
+ DSVF+ A +GKTV AE A + + AVY API+ I +++Y ++ GKF D+
Sbjct: 1378 KTNDSVFIGAPNGSGKTVCAELALLHHWSQEDYGTAVYIAPIQEIVDRRYEEWYGKFSDL 1437
Query: 470 G------LLTG----DVSLRPEASCLIMTTEILRSML--YRGADIIRDIEWVIFDEVHYV 517
G LTG D+ L A + T S+ +R I+ +++ I DE+ +
Sbjct: 1438 GDGKVLVKLTGERSQDLKLIQVADLIFCTPSQWDSLSKRWRSMRSIQKVDFYICDELQLL 1497
Query: 518 NDIERGVVWEEVIIMLPRHINIVL 541
G ++E VI + R++ + L
Sbjct: 1498 GGFY-GPLYEIVISRI-RYMAVQL 1519
Score = 104 (41.7 bits), Expect = 4.7e-12, Sum P(4) = 4.7e-12
Identities = 43/143 (30%), Positives = 67/143 (46%)
Query: 416 DSVFVAAHTSAGKTVVAEYAFALAT-KHCT----------RAVYTAPIKTISNQKYRDFS 464
+++ + A T AGKT VA KH + VY AP+K + + +FS
Sbjct: 536 ENILLCAPTGAGKTNVAMLCILNELQKHLREDLSFNLQNFKIVYIAPLKALVQEMVNNFS 595
Query: 465 GKFD-----VGLLTGDVSLRPEA---SCLIMTTEILRSMLYRGA-DI--IRDIEWVIFDE 513
+ V LTGD L + + +I+TT ++ R A D+ + + VI DE
Sbjct: 596 KRLTPYNIRVAELTGDSQLTKQQISETQIIVTTPEKWDIITRKANDLSYVNLVRLVIIDE 655
Query: 514 VHYVNDIERGVVWEEVIIMLPRH 536
VH ++D ERG V E ++ + RH
Sbjct: 656 VHLLHD-ERGPVLESIVARIFRH 677
Score = 91 (37.1 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 26/113 (23%), Positives = 52/113 (46%)
Query: 727 FSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAM 786
FS ++ N + +Q L+ GIA + +++ L+ G++KVL ++
Sbjct: 1628 FSLMENEAFNKVEDAALQQSLKHGIAYISEITSSNDQNIVQYLYRHGLIKVLIASRDVIY 1687
Query: 787 GVNAPARTVVFDNLRKFDGREFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVL 837
+ A + V+ + +DG+E R + P E QM G G ++ V+++
Sbjct: 1688 SLKAKSNAVIVMGTQYYDGKEHRYIDYPISELLQMLGFTASIGSSELSQVILM 1740
Score = 48 (22.0 bits), Expect = 2.4e-13, Sum P(4) = 2.4e-13
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 302 VYNYFSSYQSCYLGPQLEPESIDSDAE 328
VY+Y S+ YLG Q PE + S A+
Sbjct: 141 VYDYILSFIQQYLGDQ-SPEILRSAAD 166
Score = 44 (20.5 bits), Expect = 2.4e-13, Sum P(4) = 2.4e-13
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 359 SILDDGGGQQQKEAWVVSGSTEAIADRFHELV 390
S LD+ G ++Q E + STE DRF +LV
Sbjct: 175 SSLDEQGRKKQIEEVL---STELPQDRFSQLV 203
>ASPGD|ASPL0000044033 [details] [associations]
symbol:AN2482 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
EMBL:BN001307 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 OMA:FPGKHYC InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 GO:GO:0008026 OrthoDB:EOG4H75KM
EMBL:AACD01000041 RefSeq:XP_660086.1 ProteinModelPortal:Q5BAE8
EnsemblFungi:CADANIAT00009203 GeneID:2875191 KEGG:ani:AN2482.2
Uniprot:Q5BAE8
Length = 2015
Score = 153 (58.9 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 41/123 (33%), Positives = 62/123 (50%)
Query: 725 KAFSRLKGSDRNLPQIVRVQS-LLRR----GIAIHHAGLLPIVKEVIEMLFCRGVVKVLF 779
+ F R+ D L + RV+ LR GI +HHAGL+ +++ E LF +++L
Sbjct: 1392 RRFVRMSEDDLQL-NLERVKDDALREALSFGIGLHHAGLVESDRQLAEELFANNKIQILV 1450
Query: 780 STETFAMGVNAPARTVVFDNLRKFDGRE--FRQLLPGEYTQMAGRAGRRGLDKIGTVVVL 837
+T T A GVN PA VV + FD + ++ + + QM GRAGR D G +
Sbjct: 1451 ATSTLAWGVNLPAHLVVVKGTQFFDAKTEGYKDMDLTDVLQMLGRAGRPQFDSSGIARIF 1510
Query: 838 CRD 840
+D
Sbjct: 1511 TQD 1513
Score = 138 (53.6 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 55/191 (28%), Positives = 92/191 (48%)
Query: 417 SVFVAAHTSAGKTVVAEYA--FALATKHCTRAVYTAPIKTISNQKYRDFSGKFD--VGL- 471
+V + + T +GKTV AE A +A + ++ VY AP+K + ++ D+ + +GL
Sbjct: 1150 NVLLGSPTGSGKTVAAELAMWWAFRERPGSKVVYIAPMKALVRERVMDWGRRLTAPMGLK 1209
Query: 472 ---LTGDVS--LRP--EASCLIMTTE----ILRSMLYRGADIIRDIEWVIFDEVHYVNDI 520
LTGD + R +A +I T E I RS R D +R + VI DE+H +
Sbjct: 1210 LVELTGDNTPDTRTIRDADIIITTPEKWDGISRSWQTR--DYVRKVSLVIIDEIHLLGG- 1266
Query: 521 ERGVVWEEVIIML-------PRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRP 573
+RG + E ++ + + ++ +S N + A+W+G K+ + RP
Sbjct: 1267 DRGPILEIIVSRMNYIASQSKGSVRLMGMSTACANASDLANWLG-VKEGLYNFRHSV-RP 1324
Query: 574 VPLEHCLYYSG 584
VPLE +Y G
Sbjct: 1325 VPLE--IYIDG 1333
Score = 127 (49.8 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 472 LTGDVSLRP----EASCLIMTTE---ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGV 524
LTGD+ L E ++ T E ++ ++++ + +I DEVH ++D ERG
Sbjct: 383 LTGDMQLTKREIVETQIIVTTPEKWDVVTRKSTGDTELVQKVRLLIIDEVHMLHD-ERGA 441
Query: 525 VWEEVIIMLPRH-------INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLE 577
V E ++ R I IV LSAT+PN V+ AD++ K + ++ RPVPLE
Sbjct: 442 VIESLVARTQRQVESTQSLIRIVGLSATLPNYVDVADFLKVNKMAGLFFFDSSFRPVPLE 501
Query: 578 -HCLYYSGE 585
H + G+
Sbjct: 502 QHFIGVKGK 510
Score = 39 (18.8 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 1105 KKYPQALDPVKDLKLKDMNLVEAY 1128
+ P A+DP+ DL + D + V+A+
Sbjct: 1687 RNLPLAVDPMGDLPMWDPH-VKAF 1709
>POMBASE|SPBC13G1.10c [details] [associations]
symbol:mug81 "ATP-dependent RNA helicase Slh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:2000765 "regulation of
cytoplasmic translation" evidence=ISS] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 PomBase:SPBC13G1.10c
GO:GO:0005829 GO:GO:0005524 GO:GO:0007126 GO:GO:2000765
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 HOGENOM:HOG000157749 GO:GO:0004004 PIR:T39411
RefSeq:NP_596560.1 ProteinModelPortal:O60072 PRIDE:O60072
EnsemblFungi:SPBC13G1.10c.1 GeneID:2539673 KEGG:spo:SPBC13G1.10c
OMA:RKPTGEG OrthoDB:EOG4H75KM NextBio:20800827 Uniprot:O60072
Length = 1935
Score = 150 (57.9 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 37/105 (35%), Positives = 55/105 (52%)
Query: 750 GIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGR--E 807
GIA+HHAGL +++ E LF V++L +T T A GVN PA V+ +D +
Sbjct: 1422 GIALHHAGLTENDRKISEELFVNNKVQILIATSTLAWGVNTPAHLVIVKGTEYYDAKIGG 1481
Query: 808 FRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHII 852
++ + + QM GRAGR D G + +D I +S KH +
Sbjct: 1482 YKDMDLTDVLQMLGRAGRPQFDNSGVARIFVQD-IK-KSFYKHFL 1524
Score = 128 (50.1 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK 802
++ L + + IH+AG+L + + E LF G++K+L T T A GVN PA V+ +
Sbjct: 580 LKELFKYSMGIHNAGMLRSDRHLTERLFSMGILKILCCTATLAWGVNLPAYAVLIKGTQL 639
Query: 803 FDGRE--FRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHII--VGSATR 858
+D ++ F L + Q+ GRAGR + ++ + L H I V +
Sbjct: 640 YDPQKGSFVDLGVLDVLQIFGRAGRPQFESSAVAYIITTHD-----KLSHYISVVTQQSP 694
Query: 859 LESQF 863
+ES+F
Sbjct: 695 IESRF 699
Score = 127 (49.8 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 42/138 (30%), Positives = 72/138 (52%)
Query: 409 IYYLENGDSVFVAAHTSAGKTVVAEYAF--ALATKHCTRAVYTAPIKTISNQKYRDFSGK 466
IY+ + ++FV A T +GKT+ AE A AL ++ VY AP+K + ++ +D+ +
Sbjct: 1146 IYHTDT--NIFVGAPTGSGKTMAAELATWRALHNYPKSKVVYIAPMKALVKERVKDWGHR 1203
Query: 467 F--DVGL----LTGD----VSLRPEASCLIMTTE----ILRSMLYRGADIIRDIEWVIFD 512
+G+ LTGD V A+ +I T E I RS ++ ++D+ +I D
Sbjct: 1204 LVEPMGISMIELTGDTNPDVKAVTNANIIITTPEKWDGITRS--WKSRKYVQDVSLIILD 1261
Query: 513 EVHYVNDIERGVVWEEVI 530
E+H + +RG V E ++
Sbjct: 1262 EIHLLGS-DRGPVLEMIV 1278
Score = 122 (48.0 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 39/120 (32%), Positives = 58/120 (48%)
Query: 472 LTGDVSLRP----EASCLIMTTE---ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGV 524
LTGD+ L E L+ T E ++ + + VI DEVH ++D ERG
Sbjct: 374 LTGDMQLTKTEIAETQILVTTPEKWDVVTRKSVGDTQLAEKVRLVIIDEVHMLHD-ERGA 432
Query: 525 VWEEVIIMLPR-------HINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLE 577
V E ++ R I IV LSAT+PN ++ AD++G + K + + RP P+E
Sbjct: 433 VIESLVARTQRLVETSQQMIRIVGLSATLPNYLDVADFLGVNRYKGLFYFSSAFRPCPIE 492
Score = 89 (36.4 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 475 DVSLRPEASCLIMTTE----ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVI 530
DV A+ +I T E I RS ++ ++D+ +I DE+H + +RG V E ++
Sbjct: 1222 DVKAVTNANIIITTPEKWDGITRS--WKSRKYVQDVSLIILDEIHLLGS-DRGPVLEMIV 1278
Query: 531 IMLP-------RHINIVLLSATVPNTVEFADWIG-RTKQKKIRVTGTTKRPVPLEHCLYY 582
+ + + ++ LS V N + A+W+ R R + RPVPLE +Y
Sbjct: 1279 SRMNYVASQTNKKVRVLGLSTAVANANDLANWLNIRDGLFNFR---HSVRPVPLE--IYI 1333
Query: 583 SG 584
G
Sbjct: 1334 DG 1335
Score = 43 (20.2 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 515 HYVNDI-ERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRT 559
HY++ + ++ + L ++N + TV N E W+G T
Sbjct: 684 HYISVVTQQSPIESRFTDRLVDNLNAEVSLGTVTNIDEAVSWLGYT 729
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 409 IYYLENGDSVFVAAHTSAGKTVVA 432
I Y N +++ + A T AGKT VA
Sbjct: 288 IAYKTN-ENMLICAPTGAGKTDVA 310
Score = 39 (18.8 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 30/102 (29%), Positives = 47/102 (46%)
Query: 1025 EEEYCGSVSHRKGSGVINIKLPYHGAA---AGVSYEVRGIDKKELLCICNCKIKIDQVGL 1081
EEE VS + + + LP+ G A AG++ R I + EL N K++I
Sbjct: 1400 EEELEMIVSEVEDKS-LKLALPF-GIALHHAGLTENDRKISE-ELFV--NNKVQI----- 1449
Query: 1082 LEDVSSAAFS-KTVQQLLVLKSDEKKYPQALDPVKDLKLKDM 1122
L S+ A+ T L+++K E Y + KD+ L D+
Sbjct: 1450 LIATSTLAWGVNTPAHLVIVKGTEY-YDAKIGGYKDMDLTDV 1490
>SGD|S000003503 [details] [associations]
symbol:SLH1 "Putative RNA helicase related to Ski2p"
species:4932 "Saccharomyces cerevisiae" [GO:0051607 "defense
response to virus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA;IGI;IMP] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042788 "polysomal ribosome"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0002181
"cytoplasmic translation" evidence=IGI] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SGD:S000003503 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 EMBL:BK006941 GO:GO:0003676 GO:GO:0051607
GO:GO:0002181 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K01529 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003724 KO:K02201
RefSeq:NP_011793.3 GeneID:853194 KEGG:sce:YGR277C OMA:RKPTGEG
OrthoDB:EOG4H75KM RefSeq:NP_011787.4 GeneID:853187 KEGG:sce:YGR271W
EMBL:U35242 EMBL:Z73056 PIR:S64604 DIP:DIP-5563N IntAct:P53327
MINT:MINT-516762 STRING:P53327 PaxDb:P53327 PeptideAtlas:P53327
EnsemblFungi:YGR271W CYGD:YGR271w NextBio:973332
Genevestigator:P53327 GermOnline:YGR271W Uniprot:P53327
Length = 1967
Score = 159 (61.0 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 747 LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGR 806
L+ GI +HHAGL+ + + LF + +++L +T T A GVN PA V+ + FD +
Sbjct: 1427 LQFGIGLHHAGLVQKDRSISHQLFQKNKIQILIATSTLAWGVNLPAHLVIIKGTQFFDAK 1486
Query: 807 -E-FRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRD 840
E +R + + QM GRAGR D GT +V ++
Sbjct: 1487 IEGYRDMDLTDILQMMGRAGRPAYDTTGTAIVYTKE 1522
Score = 155 (59.6 bits), Expect = 7.7e-13, Sum P(3) = 7.7e-13
Identities = 55/191 (28%), Positives = 90/191 (47%)
Query: 658 GSQNNWGLRRSEVSIWLTLINKLSK--KSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSE 715
G + G R+S+ +I +KLS+ + V++F S+ K A I L S+
Sbjct: 503 GCRGKAGSRQSKENIDKVAYDKLSEMIQRGYQVMVFVHSRKETVKSARNF--IKLAESNH 560
Query: 716 KSEI----RVFCDKAFSR--LKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEML 769
+ ++ + DK +SR +K D+++ +I + G IHHAG+ + + E +
Sbjct: 561 EVDLFAPDPIEKDK-YSRSLVKNRDKDMKEIFQF------GFGIHHAGMARSDRNLTEKM 613
Query: 770 FCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGRE--FRQLLPGEYTQMAGRAGRRG 827
F G +KVL T T A GVN PA V+ + +D ++ F L + Q+ GR GR G
Sbjct: 614 FKDGAIKVLCCTATLAWGVNLPADCVIIKGTQVYDSKKGGFIDLGISDVIQIFGRGGRPG 673
Query: 828 LDKIGTVVVLC 838
+LC
Sbjct: 674 FGSANGTGILC 684
Score = 129 (50.5 bits), Expect = 6.0e-13, Sum P(3) = 6.0e-13
Identities = 45/150 (30%), Positives = 73/150 (48%)
Query: 397 FPFELDN-FQKEAIYYLEN-GDSVFVAAHTSAGKTVVAEYAF--ALATKHCTRAVYTAPI 452
+PF+ N Q Y L N ++ FV + T +GKT+VAE A A T + VY AP+
Sbjct: 1135 YPFKYFNPMQTMTFYTLYNTNENAFVGSPTGSGKTIVAELAIWHAFKTFPGKKIVYIAPM 1194
Query: 453 KTISNQKYRDFSGKFD------VGLLTGDVSLRP----EASCLIMTTEILR--SMLYRGA 500
K + ++ D+ K V LTGD P +A+ +I T E S ++
Sbjct: 1195 KALVRERVDDWRKKITPVTGDKVVELTGDSLPDPKDVHDATIVITTPEKFDGISRNWQTR 1254
Query: 501 DIIRDIEWVIFDEVHYVNDIERGVVWEEVI 530
++D+ +I DE+H + +RG + E ++
Sbjct: 1255 KFVQDVSLIIMDEIHLLAS-DRGPILEMIV 1283
Score = 118 (46.6 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 41/123 (33%), Positives = 68/123 (55%)
Query: 472 LTGDVSL-RPE--ASCLIMTTEILRSMLYRGA----DIIRDIEWVIFDEVHYVNDIERGV 524
LTGD+ L + E A+ +I+TT ++ R A D++ ++ +I DEVH +++ +RG
Sbjct: 380 LTGDMQLTKAEILATQVIVTTPEKWDVVTRKANGDNDLVSKVKLLIIDEVHLLHE-DRGS 438
Query: 525 VWEEVIIMLPRH-------INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLE 577
V E ++ R I I+ LSAT+PN ++ AD++G +Q + + RP PLE
Sbjct: 439 VIETLVARTLRQVESSQSMIRIIGLSATLPNFMDVADFLGVNRQIGMFYFDQSFRPKPLE 498
Query: 578 HCL 580
L
Sbjct: 499 QQL 501
Score = 92 (37.4 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 31/105 (29%), Positives = 59/105 (56%)
Query: 445 RAVYTAPIKTISNQKYRDFSGK---FDVGL--LTGDVSL-RPE--ASCLIMTTEILRSML 496
+ +Y AP+K ++ + FS K F++ + LTGD+ L + E A+ +I+TT ++
Sbjct: 348 KVIYVAPLKALAAEIVDKFSKKLAPFNIQVRELTGDMQLTKAEILATQVIVTTPEKWDVV 407
Query: 497 YRGA----DIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHI 537
R A D++ ++ +I DEVH +++ +RG V E ++ R +
Sbjct: 408 TRKANGDNDLVSKVKLLIIDEVHLLHE-DRGSVIETLVARTLRQV 451
Score = 91 (37.1 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 36/139 (25%), Positives = 65/139 (46%)
Query: 472 LTGDVSLRP----EASCLIMTTEILR--SMLYRGADIIRDIEWVIFDEVHYVNDIERGVV 525
LTGD P +A+ +I T E S ++ ++D+ +I DE+H + +RG +
Sbjct: 1220 LTGDSLPDPKDVHDATIVITTPEKFDGISRNWQTRKFVQDVSLIIMDEIHLLAS-DRGPI 1278
Query: 526 WEEVIIML-------PRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEH 578
E ++ + + + ++ +S V N + A W+G K + ++ RPVPL+
Sbjct: 1279 LEMIVSRMNYISSQTKQPVRLLGMSTAVSNAYDMAGWLG-VKDHGLYNFPSSVRPVPLK- 1336
Query: 579 CLYYSGEFYKVCENEAFIP 597
+Y G +N AF P
Sbjct: 1337 -MYIDG----FPDNLAFCP 1350
Score = 52 (23.4 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 397 FPFELDNFQKEAIYYL--ENGDSVFVAAHTSAGKTVVA 432
FP+E N + +Y + + +++ + A T AGKT +A
Sbjct: 283 FPYETLNQIQSLVYPVAYKTNENMLICAPTGAGKTDIA 320
Score = 42 (19.8 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 493 RSMLYRGADIIRDIEWVIFDEV--HYV-NDIER 522
R M+ A + ++ ++FDEV H++ D+ R
Sbjct: 768 RKMIVVAARRLHALQMIVFDEVSMHFIAKDLGR 800
Score = 40 (19.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 13/57 (22%), Positives = 28/57 (49%)
Query: 117 QTKQGKWEPNSVDVSELMLGAQDSGPLPRVAGPAKDFVRGSINSRPFRPGGLEDSQS 173
QT++ + + + + E+ L A D GP+ + +++ S +P R G+ + S
Sbjct: 1252 QTRKFVQDVSLIIMDEIHLLASDRGPILEMIVSRMNYI-SSQTKQPVRLLGMSTAVS 1307
Score = 39 (18.8 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 515 HYVNDI-ERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRT 559
HYV+ I ++ + L ++N + +V N E +W+G T
Sbjct: 692 HYVSLITQQHPIESRFGSKLVDNLNAEISLGSVTNVDEAIEWLGYT 737
Score = 38 (18.4 bits), Expect = 6.0e-13, Sum P(3) = 6.0e-13
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 240 NELSVQFDDLFK 251
NE+ +Q+DD FK
Sbjct: 338 NEIDIQYDD-FK 348
Score = 38 (18.4 bits), Expect = 6.0e-13, Sum P(3) = 6.0e-13
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 223 YKDQDQSSLKSTSDEKLN-ELSVQFD 247
+++++ LK SDE + ++ Q D
Sbjct: 843 FREEESKELKRLSDESVECQIGSQLD 868
Score = 37 (18.1 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 481 EASCLIMTTEILRSMLYRGADIIRD 505
EA +TT ++R + G D + D
Sbjct: 1001 EAEIFPITTNVMRIHIALGPDFVWD 1025
>WB|WBGene00012896 [details] [associations]
symbol:snrp-200 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0018991 GO:GO:0016477 GO:GO:0008406
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 GeneTree:ENSGT00640000091272 KO:K12854
OMA:KWDVLSR GO:GO:0008026 EMBL:AL110485 RefSeq:NP_496710.1
ProteinModelPortal:Q9U2G0 SMR:Q9U2G0 IntAct:Q9U2G0
MINT:MINT-1062451 STRING:Q9U2G0 PaxDb:Q9U2G0
EnsemblMetazoa:Y46G5A.4 GeneID:174901 KEGG:cel:CELE_Y46G5A.4
UCSC:Y46G5A.4 CTD:174901 WormBase:Y46G5A.4 InParanoid:Q9U2G0
NextBio:885976 Uniprot:Q9U2G0
Length = 2145
Score = 160 (61.4 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 56/187 (29%), Positives = 91/187 (48%)
Query: 688 VVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDK--AFSRLKGSDRNLPQIVRVQS 745
V++F S+ K A + L EK + F + A + + ++ + + ++
Sbjct: 714 VLVFVHSRKETAKTAKAIRDACL----EKDTLSAFMREGSASTEILRTEAEQAKNLDLKD 769
Query: 746 LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDG 805
LL G AIHHAG+ + + ++E LF ++VLFST T A GVN PA TV+ + ++
Sbjct: 770 LLPYGFAIHHAGMNRVDRTLVEDLFADRHIQVLFSTATLAWGVNLPAHTVIIKGTQIYNP 829
Query: 806 REFRQLLPG--EYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHII--VGSATRLES 861
+ R G + QM GRAGR D G ++ I S+L++ + + +ES
Sbjct: 830 EKGRWTELGALDIMQMLGRAGRPQYDDRGEGIL-----ITNHSELQYYLSLMNQQLPVES 884
Query: 862 QF--RLT 866
Q RLT
Sbjct: 885 QMVSRLT 891
Score = 129 (50.5 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 42/151 (27%), Positives = 74/151 (49%)
Query: 445 RAVYTAPIKTISNQKYRDFSGKF-----DVGLLTGDVSLRPE----ASCLIMTTEILRSM 495
+ VY AP+K++ + FS + VG +TGD + E ++ T E +
Sbjct: 531 KIVYIAPMKSLVQEMVGSFSKRLAPFGITVGEMTGDAQMSKEQFMATQVIVCTPEKYDVV 590
Query: 496 LYRGADIIRD--IEWVIFDEVHYVNDIERGVVWEEVIIMLPRHIN-------IVLLSATV 546
+G + + + +I DE+H ++D +RG V E +++ R + +V LSAT+
Sbjct: 591 TRKGGERAYNQMVRLLIIDEIHLLHD-DRGPVLESIVVRTIRQMEQNHDECRLVGLSATL 649
Query: 547 PNTVEFADWIGRTKQKKIRVTGTTKRPVPLE 577
PN + A ++ R K + + + RPVPLE
Sbjct: 650 PNYQDVATFL-RVKPEHLHFFDNSYRPVPLE 679
Score = 67 (28.6 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 38/192 (19%), Positives = 69/192 (35%)
Query: 653 IKNSGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTS 712
IK+ S N E ++ + K P ++F + +A + + L
Sbjct: 1521 IKSFNLSHNASRFAAMERPVYQAICRHAGKLEPKPALVFVPVRRQTRPVAVALLTMALAD 1580
Query: 713 SSEKSEIRVF-CDKAFSRLKGS--DRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEML 769
+ K +R+ D F L D +L + V G+ H G P +++ L
Sbjct: 1581 GAPKRFLRLAEHDDTFQALLADIEDESLRESVSC------GVGFLHEGTAPKDVHIVQQL 1634
Query: 770 FCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGRE--FRQLLPGEYTQMAGRAGRRG 827
F ++V + A VV + + ++G+ + + M G A R
Sbjct: 1635 FESNAIQVCVVPRGMCYQIEMSAYLVVVMDTQFYNGKYHVYEDYPIADMLHMVGLANRPI 1694
Query: 828 LDKIGTVVVLCR 839
LD VV+C+
Sbjct: 1695 LDSDAKCVVMCQ 1706
Score = 57 (25.1 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 27/97 (27%), Positives = 42/97 (43%)
Query: 412 LENGDSVFVAAHTSAGKTVVA------EYAFALATKHCTRA-----VYTAPIKTISNQKY 460
L + + + + A T AGKT VA E LA + VY AP+K++ +
Sbjct: 487 LRSKEHLLLCAPTGAGKTNVALLTMLQEIGNHLAEDGSVKLDEFKIVYIAPMKSLVQEMV 546
Query: 461 RDFSGKF-----DVGLLTGDVSLRPEASCLIMTTEIL 492
FS + VG +TGD + E M T+++
Sbjct: 547 GSFSKRLAPFGITVGEMTGDAQMSKEQ---FMATQVI 580
Score = 42 (19.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 454 TISNQKYRDFSGKFDVGLLTGDVS 477
T+ N K+RD K +V L G ++
Sbjct: 137 TLKNDKFRDKEKKKEVEALLGPLT 160
Score = 41 (19.5 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 1113 PVK-DLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLE 1150
PV DL++K NL ++A + R + C KLE
Sbjct: 1514 PVPLDLEIKSFNLSHNASRFAAMERPVYQAICRHAGKLE 1552
>UNIPROTKB|Q9U2G0 [details] [associations]
symbol:Y46G5A.4 "Putative U5 small nuclear
ribonucleoprotein 200 kDa helicase" species:6239 "Caenorhabditis
elegans" [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0018991 GO:GO:0016477 GO:GO:0008406 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR GO:GO:0008026
EMBL:AL110485 RefSeq:NP_496710.1 ProteinModelPortal:Q9U2G0
SMR:Q9U2G0 IntAct:Q9U2G0 MINT:MINT-1062451 STRING:Q9U2G0
PaxDb:Q9U2G0 EnsemblMetazoa:Y46G5A.4 GeneID:174901
KEGG:cel:CELE_Y46G5A.4 UCSC:Y46G5A.4 CTD:174901 WormBase:Y46G5A.4
InParanoid:Q9U2G0 NextBio:885976 Uniprot:Q9U2G0
Length = 2145
Score = 160 (61.4 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 56/187 (29%), Positives = 91/187 (48%)
Query: 688 VVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDK--AFSRLKGSDRNLPQIVRVQS 745
V++F S+ K A + L EK + F + A + + ++ + + ++
Sbjct: 714 VLVFVHSRKETAKTAKAIRDACL----EKDTLSAFMREGSASTEILRTEAEQAKNLDLKD 769
Query: 746 LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDG 805
LL G AIHHAG+ + + ++E LF ++VLFST T A GVN PA TV+ + ++
Sbjct: 770 LLPYGFAIHHAGMNRVDRTLVEDLFADRHIQVLFSTATLAWGVNLPAHTVIIKGTQIYNP 829
Query: 806 REFRQLLPG--EYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHII--VGSATRLES 861
+ R G + QM GRAGR D G ++ I S+L++ + + +ES
Sbjct: 830 EKGRWTELGALDIMQMLGRAGRPQYDDRGEGIL-----ITNHSELQYYLSLMNQQLPVES 884
Query: 862 QF--RLT 866
Q RLT
Sbjct: 885 QMVSRLT 891
Score = 129 (50.5 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 42/151 (27%), Positives = 74/151 (49%)
Query: 445 RAVYTAPIKTISNQKYRDFSGKF-----DVGLLTGDVSLRPE----ASCLIMTTEILRSM 495
+ VY AP+K++ + FS + VG +TGD + E ++ T E +
Sbjct: 531 KIVYIAPMKSLVQEMVGSFSKRLAPFGITVGEMTGDAQMSKEQFMATQVIVCTPEKYDVV 590
Query: 496 LYRGADIIRD--IEWVIFDEVHYVNDIERGVVWEEVIIMLPRHIN-------IVLLSATV 546
+G + + + +I DE+H ++D +RG V E +++ R + +V LSAT+
Sbjct: 591 TRKGGERAYNQMVRLLIIDEIHLLHD-DRGPVLESIVVRTIRQMEQNHDECRLVGLSATL 649
Query: 547 PNTVEFADWIGRTKQKKIRVTGTTKRPVPLE 577
PN + A ++ R K + + + RPVPLE
Sbjct: 650 PNYQDVATFL-RVKPEHLHFFDNSYRPVPLE 679
Score = 67 (28.6 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 38/192 (19%), Positives = 69/192 (35%)
Query: 653 IKNSGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNHCDKLADGMSGIDLTS 712
IK+ S N E ++ + K P ++F + +A + + L
Sbjct: 1521 IKSFNLSHNASRFAAMERPVYQAICRHAGKLEPKPALVFVPVRRQTRPVAVALLTMALAD 1580
Query: 713 SSEKSEIRVF-CDKAFSRLKGS--DRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEML 769
+ K +R+ D F L D +L + V G+ H G P +++ L
Sbjct: 1581 GAPKRFLRLAEHDDTFQALLADIEDESLRESVSC------GVGFLHEGTAPKDVHIVQQL 1634
Query: 770 FCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGRE--FRQLLPGEYTQMAGRAGRRG 827
F ++V + A VV + + ++G+ + + M G A R
Sbjct: 1635 FESNAIQVCVVPRGMCYQIEMSAYLVVVMDTQFYNGKYHVYEDYPIADMLHMVGLANRPI 1694
Query: 828 LDKIGTVVVLCR 839
LD VV+C+
Sbjct: 1695 LDSDAKCVVMCQ 1706
Score = 57 (25.1 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 27/97 (27%), Positives = 42/97 (43%)
Query: 412 LENGDSVFVAAHTSAGKTVVA------EYAFALATKHCTRA-----VYTAPIKTISNQKY 460
L + + + + A T AGKT VA E LA + VY AP+K++ +
Sbjct: 487 LRSKEHLLLCAPTGAGKTNVALLTMLQEIGNHLAEDGSVKLDEFKIVYIAPMKSLVQEMV 546
Query: 461 RDFSGKF-----DVGLLTGDVSLRPEASCLIMTTEIL 492
FS + VG +TGD + E M T+++
Sbjct: 547 GSFSKRLAPFGITVGEMTGDAQMSKEQ---FMATQVI 580
Score = 42 (19.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 454 TISNQKYRDFSGKFDVGLLTGDVS 477
T+ N K+RD K +V L G ++
Sbjct: 137 TLKNDKFRDKEKKKEVEALLGPLT 160
Score = 41 (19.5 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 1113 PVK-DLKLKDMNLVEAYYKWAGLLRKMAANKCHGCIKLE 1150
PV DL++K NL ++A + R + C KLE
Sbjct: 1514 PVPLDLEIKSFNLSHNASRFAAMERPVYQAICRHAGKLE 1552
>RGD|1309795 [details] [associations]
symbol:Polq "polymerase (DNA directed), theta" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003887 OMA:CFSDESI IPI:IPI00362354
Ensembl:ENSRNOT00000034841 UCSC:RGD:1309795 Uniprot:D4ABI8
Length = 2540
Score = 207 (77.9 bits), Expect = 3.6e-13, Sum P(4) = 3.6e-13
Identities = 65/203 (32%), Positives = 108/203 (53%)
Query: 688 VVIFCFSKNHCDKLADGMSG--IDLTSSSE----KSEIR-VFCDK-----AFSRLKGSDR 735
V++FC SK C+K+AD ++ +L E SE V D+ +LK S
Sbjct: 341 VLVFCPSKKWCEKVADIIAREFYNLHHQPEGLVKSSEFPPVILDQKSLLEVIDQLKRSPS 400
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
L +++ + + G+A HHAGL +++IE F +G+++VL +T T + GVN PAR V
Sbjct: 401 GLDSVLK--NTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRV 458
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCR--DEIPGESDLKHIIV 853
+ F G+ L Y QM GRAGR+G+D +G +++C+ ++ G + L+ +
Sbjct: 459 II-RTPVFGGQPLDILT---YKQMVGRAGRKGVDTMGESILVCKNSEKSKGIALLQGSLE 514
Query: 854 GSATRLESQFRLTYIMILHLLRV 876
+ L+SQ +T MI +L +
Sbjct: 515 PVHSCLQSQGEVTSTMIRAILEI 537
Score = 78 (32.5 bits), Expect = 3.6e-13, Sum P(4) = 3.6e-13
Identities = 42/166 (25%), Positives = 76/166 (45%)
Query: 377 GSTEAIADRFHELVPDLALDFPFELDNFQKEAIYYLE--NGDSVFVAAHTSAGKTVVAEY 434
G +A+ +++H + + FE +Q E + + G ++ +A TSAGKT+VAE
Sbjct: 76 GLPKAVLEKYH----NFGVKKMFE---WQAECLLLGQVLEGKNLVYSAPTSAGKTLVAEL 128
Query: 435 AF---ALATKHCTRAVYTAPIKTISNQKYRDFSGKF-DVGLLT----GDVSLRPEASCL- 485
L T+ +A++ P +++ +K F +VG+ G S S L
Sbjct: 129 LILKRVLETRK--KALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPTGRFSSLD 186
Query: 486 --IMTTEILRSMLYRGADIIR-DI-EWVIFDEVHYVNDIERGVVWE 527
+ T E ++ R + + D+ V+ DE+H + D RG + E
Sbjct: 187 VAVCTIERANGLINRLIEENKMDLLGTVVVDELHMLGDSHRGYLLE 232
Score = 53 (23.7 bits), Expect = 3.6e-13, Sum P(4) = 3.6e-13
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 537 INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGEFY 587
+ IV +SAT+PN A W+ + T RPVPL + Y
Sbjct: 260 VQIVGMSATLPNLQLVASWLNA------ELYHTDFRPVPLLESIKVGNSIY 304
Score = 42 (19.8 bits), Expect = 3.6e-13, Sum P(4) = 3.6e-13
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 1208 RVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQ 1249
R+AC SGE +I +E +D + EA+ M+AF Q+
Sbjct: 1507 RMACL--SGESIIFSE------IDSAQVIEALDNMAAFYMQE 1540
Score = 39 (18.8 bits), Expect = 7.1e-13, Sum P(4) = 7.1e-13
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 1307 WAK-GTPFADICELTDVPEGLIVRTI 1331
W K T + EL V EG + R +
Sbjct: 672 WEKLPTSMKRVAELVGVEEGFLARCV 697
Score = 38 (18.4 bits), Expect = 8.9e-13, Sum P(4) = 8.9e-13
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 1293 RDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLI 1327
RD+++ G V+ W F E +D G +
Sbjct: 573 RDDVQRGAVDACVTWLLENEFIQAAEPSDGTGGKV 607
>UNIPROTKB|D4A628 [details] [associations]
symbol:Polq "Polymerase (DNA directed), theta (Predicted),
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
GO:GO:0006281 SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00640000091272 GO:GO:0008026
GO:GO:0003887 GO:GO:0043142 CTD:10721 KO:K02349 OrthoDB:EOG42RD6C
EMBL:CH473967 IPI:IPI00949142 RefSeq:NP_001099348.1
UniGene:Rn.131176 Ensembl:ENSRNOT00000063995 GeneID:288079
KEGG:rno:288079 NextBio:627549 Uniprot:D4A628
Length = 2547
Score = 207 (77.9 bits), Expect = 3.6e-13, Sum P(4) = 3.6e-13
Identities = 65/203 (32%), Positives = 108/203 (53%)
Query: 688 VVIFCFSKNHCDKLADGMSG--IDLTSSSE----KSEIR-VFCDK-----AFSRLKGSDR 735
V++FC SK C+K+AD ++ +L E SE V D+ +LK S
Sbjct: 341 VLVFCPSKKWCEKVADIIAREFYNLHHQPEGLVKSSEFPPVILDQKSLLEVIDQLKRSPS 400
Query: 736 NLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTV 795
L +++ + + G+A HHAGL +++IE F +G+++VL +T T + GVN PAR V
Sbjct: 401 GLDSVLK--NTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRV 458
Query: 796 VFDNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCR--DEIPGESDLKHIIV 853
+ F G+ L Y QM GRAGR+G+D +G +++C+ ++ G + L+ +
Sbjct: 459 II-RTPVFGGQPLDILT---YKQMVGRAGRKGVDTMGESILVCKNSEKSKGIALLQGSLE 514
Query: 854 GSATRLESQFRLTYIMILHLLRV 876
+ L+SQ +T MI +L +
Sbjct: 515 PVHSCLQSQGEVTSTMIRAILEI 537
Score = 78 (32.5 bits), Expect = 3.6e-13, Sum P(4) = 3.6e-13
Identities = 42/166 (25%), Positives = 76/166 (45%)
Query: 377 GSTEAIADRFHELVPDLALDFPFELDNFQKEAIYYLE--NGDSVFVAAHTSAGKTVVAEY 434
G +A+ +++H + + FE +Q E + + G ++ +A TSAGKT+VAE
Sbjct: 76 GLPKAVLEKYH----NFGVKKMFE---WQAECLLLGQVLEGKNLVYSAPTSAGKTLVAEL 128
Query: 435 AF---ALATKHCTRAVYTAPIKTISNQKYRDFSGKF-DVGLLT----GDVSLRPEASCL- 485
L T+ +A++ P +++ +K F +VG+ G S S L
Sbjct: 129 LILKRVLETRK--KALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPTGRFSSLD 186
Query: 486 --IMTTEILRSMLYRGADIIR-DI-EWVIFDEVHYVNDIERGVVWE 527
+ T E ++ R + + D+ V+ DE+H + D RG + E
Sbjct: 187 VAVCTIERANGLINRLIEENKMDLLGTVVVDELHMLGDSHRGYLLE 232
Score = 53 (23.7 bits), Expect = 3.6e-13, Sum P(4) = 3.6e-13
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 537 INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGEFY 587
+ IV +SAT+PN A W+ + T RPVPL + Y
Sbjct: 260 VQIVGMSATLPNLQLVASWLNA------ELYHTDFRPVPLLESIKVGNSIY 304
Score = 42 (19.8 bits), Expect = 3.6e-13, Sum P(4) = 3.6e-13
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 1208 RVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQ 1249
R+AC SGE +I +E +D + EA+ M+AF Q+
Sbjct: 1514 RMACL--SGESIIFSE------IDSAQVIEALDNMAAFYMQE 1547
Score = 39 (18.8 bits), Expect = 7.2e-13, Sum P(4) = 7.2e-13
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 1307 WAK-GTPFADICELTDVPEGLIVRTI 1331
W K T + EL V EG + R +
Sbjct: 672 WEKLPTSMKRVAELVGVEEGFLARCV 697
Score = 38 (18.4 bits), Expect = 9.0e-13, Sum P(4) = 9.0e-13
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 1293 RDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLI 1327
RD+++ G V+ W F E +D G +
Sbjct: 573 RDDVQRGAVDACVTWLLENEFIQAAEPSDGTGGKV 607
>UNIPROTKB|F1RIW4 [details] [associations]
symbol:DDX60 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:1900246 "positive regulation of RIG-I signaling
pathway" evidence=IEA] [GO:1900245 "positive regulation of MDA-5
signaling pathway" evidence=IEA] [GO:0051607 "defense response to
virus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003727 "single-stranded RNA binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 GO:GO:0003727 GO:GO:0051607
GO:GO:0003690 GO:GO:0003725 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 OMA:QDCTYAD GO:GO:1900245 GO:GO:1900246
GeneTree:ENSGT00690000102154 EMBL:AEMK01191618 EMBL:CU469408
Ensembl:ENSSSCT00000010657 Uniprot:F1RIW4
Length = 1705
Score = 185 (70.2 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 58/200 (29%), Positives = 99/200 (49%)
Query: 709 DLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIEM 768
D T + +K+ F R+K + + +++L RG+ HH+ L K+++E+
Sbjct: 1216 DCTYADQKALDAQTLQTVFDRVKLTRKG----AELKALAARGVGYHHSSLNFKEKQLVEI 1271
Query: 769 LFCRGVVKVLFSTETFAMGVNAPARTVVF-DNLRKFDGREFRQLLPGEYTQMAGRAGRRG 827
LF +G ++V+ +T T A+G+N P ++VVF N D +RQ M+GRAGRRG
Sbjct: 1272 LFRKGFIRVVTATGTLALGINMPCKSVVFAQNSIYLDALNYRQ--------MSGRAGRRG 1323
Query: 828 LDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLLRVE---------E 878
D +G V +IP ++ +I + +L QF L+ ++L L+ + +
Sbjct: 1324 QDLLGDVYFF---DIPLPK-IEKLIKSNVPQLRGQFPLSISLVLRLMLLASKGDDPGDAQ 1379
Query: 879 LKVEDMLKRSFAEFHSQKKL 898
KV +LK S F + L
Sbjct: 1380 AKVLSVLKHSLLSFKQPRTL 1399
Score = 102 (41.0 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 35/138 (25%), Positives = 64/138 (46%)
Query: 429 TVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDF-SGKFDVGLLTGDVSLRPEASCLIM 487
T+++ + L +A+ T+ N+ ++ G+ G+ T D S +++
Sbjct: 796 TIISLTSITLVYVLINQALVNQVAATVQNRFRKNLPDGEALCGVFTRDYRHDALNSQILI 855
Query: 488 TT----EILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHINIVLLS 543
T EIL +R A + R I +VIFDEVH + +WE +++M+ + LS
Sbjct: 856 TVPACFEILLLAPHRQAWVKR-IRYVIFDEVHCLGGEIGAEIWEHLLVMI--RCPFLALS 912
Query: 544 ATVPNTVEFADWIGRTKQ 561
AT+ N +W+ K+
Sbjct: 913 ATISNPEHLTEWLQSVKR 930
Score = 37 (18.1 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 676 LINKLSKKSLLPVVIFCF 693
L+ KL + LP + F F
Sbjct: 1110 LVEKLKQMEKLPALFFLF 1127
Score = 37 (18.1 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 401 LDNFQKEAIYYLE-NGDSVFVAAHTSAGKT--VVAEYAFALATKHCTRAVYTAPIKTISN 457
L+N Q +L ++ + A AG+ V+ YA+ + ++H + + +TI N
Sbjct: 149 LNNLQTHLFNFLIIQSWALKINAVLFAGQVADVLRLYAYFMPSRHKNQMFFQKNRRTIEN 208
Query: 458 QKYR 461
YR
Sbjct: 209 A-YR 211
>TAIR|locus:2089144 [details] [associations]
symbol:RCK "ROCK-N-ROLLERS" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA;IMP] [GO:0051026 "chiasma assembly"
evidence=IMP] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0006302 "double-strand break repair"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0007067
"mitosis" evidence=RCA] [GO:0007129 "synapsis" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 eggNOG:COG1204 GO:GO:0007131
GO:GO:0008026 GO:GO:0051026 KO:K15271 EMBL:AY822649 EMBL:AY960701
IPI:IPI00517826 RefSeq:NP_189410.2 UniGene:At.53523
ProteinModelPortal:Q5D892 SMR:Q5D892 STRING:Q5D892 PRIDE:Q5D892
EnsemblPlants:AT3G27730.1 GeneID:822395 KEGG:ath:AT3G27730
TAIR:At3g27730 HOGENOM:HOG000029933 InParanoid:Q5D892 OMA:IMTRRET
PhylomeDB:Q5D892 ProtClustDB:CLSN2699173 Genevestigator:Q5D892
Uniprot:Q5D892
Length = 1133
Score = 166 (63.5 bits), Expect = 9.1e-13, Sum P(3) = 9.1e-13
Identities = 52/201 (25%), Positives = 96/201 (47%)
Query: 689 VIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLR 748
++FC ++ + A ++ +T I+ + RL+ + ++QS +
Sbjct: 278 LVFCSTRKGAQEAAQKLAQTAMTYGYSNPFIK--SREQLERLREASPMCSD-KQMQSYIL 334
Query: 749 RGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGREF 808
+G+ H+ GL + ++E LF G ++V+ +T T A G+N PA TVV + + F+ +
Sbjct: 335 QGVGYHNGGLCQKDRSLVEGLFLNGDIQVICTTNTLAHGINLPAHTVVIKSTQHFNKEKG 394
Query: 809 RQLLPGEYT--QMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLT 866
+ T QM+GRAGR D G V+++ R E L ++ +ESQ L
Sbjct: 395 HYMEYDRSTLLQMSGRAGRPPFDDTGMVIIMTRRETV---HLYENLLNGCEVVESQ--LL 449
Query: 867 YIMILHLL-RVEELKVEDMLK 886
+I HL + +L + D+ +
Sbjct: 450 PCLIEHLTAEIVQLTISDITR 470
Score = 107 (42.7 bits), Expect = 9.1e-13, Sum P(3) = 9.1e-13
Identities = 50/167 (29%), Positives = 76/167 (45%)
Query: 397 FPFELDN-FQKEAIYYLENGD-SVFVAAHTSAGKTVVAEYA----FA---------LATK 441
F F N Q E + D ++ ++A T +GKTV+ E F+ L K
Sbjct: 20 FSFRYFNSLQSECFPLCFHSDINMIISAPTGSGKTVLFELCILRLFSKSISKEGSFLHAK 79
Query: 442 HCTRAVYTAPIKTISNQKYRDFSGKFDV-GL----LTGD---VSLR--PEASCLIMTTEI 491
+ VY +P K + +K RD++ KF+ G+ LTGD S + +A ++ T E
Sbjct: 80 GALKTVYISPSKALVQEKLRDWNQKFNSWGISCLELTGDNETYSTKNIQDADIILTTPEK 139
Query: 492 LRSML-YR----GADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIML 533
++ YR G DI V+ DEVH +ND RG E ++ L
Sbjct: 140 FDAVSRYRVTSGGLGFFSDIALVLIDEVHLLND-PRGAALEAIVSRL 185
Score = 95 (38.5 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 28/91 (30%), Positives = 43/91 (47%)
Query: 499 GADIIRDIEWVIFDEVHYVNDIERGVVWEEVI----IMLPRH---------INIVLLSAT 545
G DI V+ DEVH +ND RG E ++ I+ H + ++ +SAT
Sbjct: 152 GLGFFSDIALVLIDEVHLLND-PRGAALEAIVSRLKILSSNHELRSSTLASVRLLAVSAT 210
Query: 546 VPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
+PN + A+W+ + I+ G RPV L
Sbjct: 211 IPNIEDLAEWL-KVPTAGIKRFGEEMRPVKL 240
Score = 43 (20.2 bits), Expect = 9.1e-13, Sum P(3) = 9.1e-13
Identities = 18/84 (21%), Positives = 36/84 (42%)
Query: 943 TEAFMQSAHQFLMPGRVLFV-KSQTGQ---DHLLGAVVKAPSANNKEYIVMLLKPDLPSA 998
T+ QSA Q PG F K++T + D + ++ S N+ ++ + +
Sbjct: 993 TKDIKQSAQQITSPGYASFAEKTETERPFSDETIFNYIRKRSKNSPALATSKIENPITIS 1052
Query: 999 SETSLDKKSGDF-SEGYFVIPKSK 1021
S+ + + + + G V P +K
Sbjct: 1053 SQEGRNAEISPYRTYGLLVSPATK 1076
Score = 37 (18.1 bits), Expect = 3.7e-12, Sum P(3) = 3.7e-12
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 1215 SGEELICTECLFENQLDDLEP 1235
SG+ ++ + L EN +L+P
Sbjct: 959 SGKSILKRKSLVENNSPELDP 979
>TAIR|locus:2059969 [details] [associations]
symbol:AT2G42270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003676 EMBL:AC002561 GO:GO:0030529
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 UniGene:At.12448 UniGene:At.43726 KO:K12854
OMA:RDTHESS GO:GO:0008026 IPI:IPI00539463 PIR:T00936
RefSeq:NP_181756.1 ProteinModelPortal:O48534 SMR:O48534
STRING:O48534 PaxDb:O48534 PRIDE:O48534 EnsemblPlants:AT2G42270.1
GeneID:818828 KEGG:ath:AT2G42270 TAIR:At2g42270 InParanoid:O48534
PhylomeDB:O48534 ProtClustDB:CLSN2679454 ArrayExpress:O48534
Genevestigator:O48534 Uniprot:O48534
Length = 2172
Score = 175 (66.7 bits), Expect = 2.1e-12, Sum P(5) = 2.1e-12
Identities = 47/125 (37%), Positives = 69/125 (55%)
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK 802
++ LL G AIHHAGL +E++E F G ++VL ST T A GVN PA TV+ +
Sbjct: 799 LKELLPYGFAIHHAGLTRTDREIVENQFRWGNLQVLISTATLAWGVNLPAHTVIIKGTQV 858
Query: 803 FDGR--EFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHII--VGSATR 858
++ E+ +L P + QM GRAGR D+ G ++ I G S L++ + +
Sbjct: 859 YNPERGEWMELSPLDVMQMIGRAGRPQYDQQGEGII-----ITGYSKLQYYLRLMNEQLP 913
Query: 859 LESQF 863
+ESQF
Sbjct: 914 IESQF 918
Score = 136 (52.9 bits), Expect = 5.9e-11, Sum P(4) = 5.9e-11
Identities = 50/153 (32%), Positives = 75/153 (49%)
Query: 405 QKEAIYYLEN-GDSVFVAAHTSAGKTVVAEYAFALATKH------CTRAVYTAPIKTISN 457
Q + L N D+V VAA T +GKT+ AE FA+ H R VY AP++ I+
Sbjct: 1356 QTQVFTVLYNTSDNVVVAAPTGSGKTICAE--FAILRNHLEGPDSAMRVVYIAPLEAIAK 1413
Query: 458 QKYRDFSGKFDVGL------LTG----DVSLRPEASCLIMTTEI--LRSMLYRGADIIRD 505
+++RD+ KF GL LTG D+ L + +I T E S ++ I+
Sbjct: 1414 EQFRDWEKKFGKGLGLRVVELTGETLLDLKLLEKGQIIISTPEKWDALSRRWKQRKYIQQ 1473
Query: 506 IEWVIFDEVHYVNDIERGVVWEEVIIMLPRHIN 538
+ I DE+H + + G V E VI+ R+I+
Sbjct: 1474 VSLFIVDELHLIGG-QGGQVLE-VIVSRMRYIS 1504
Score = 121 (47.7 bits), Expect = 5.9e-11, Sum P(4) = 5.9e-11
Identities = 43/160 (26%), Positives = 68/160 (42%)
Query: 683 KSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVR 742
K+ P ++F ++ H ++ +DL + S ++ D L+ + L QI
Sbjct: 1581 KNKKPAIVFVPTRKHVR-----LTAVDLIAYSHMDNMKS-PDFLLGNLEELEPFLIQICE 1634
Query: 743 --VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNL 800
++ LR GI H GL + +E++ LF G ++V + + G A VV
Sbjct: 1635 ETLKETLRHGIGYLHEGLSNLDQEIVTQLFEAGRIQVCVMSSSLCWGTPLKAHLVVVMGT 1694
Query: 801 RKFDGREFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLC 838
+DGRE P QM GR R LD G V+ C
Sbjct: 1695 HFYDGRENSHSDYPISNLLQMMGRGSRPLLDDAGKCVIFC 1734
Score = 103 (41.3 bits), Expect = 2.1e-12, Sum P(5) = 2.1e-12
Identities = 40/145 (27%), Positives = 69/145 (47%)
Query: 445 RAVYTAPIKTISNQKYRDFSGKFDVGLLTGDVSLR----PEASCLIMTTEILRSMLYRGA 500
+A+ + ++S Q+ +DF V L+GD SL E ++ T E + +
Sbjct: 570 KALVAEVVDSLS-QRLKDFG--VTVKELSGDQSLTGQEIKETQIIVTTPEKWDIITRKSG 626
Query: 501 D--IIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPR-------HINIVLLSATVPNTVE 551
D + + +I DE+H ++D RG V E ++ R HI +V LSAT+PN +
Sbjct: 627 DRTYTQLVRLLIIDEIHLLDD-NRGPVLESIVARTLRQIESTKEHIRLVGLSATLPNCDD 685
Query: 552 FADWIGRTKQKKIRVTGTTKRPVPL 576
A ++ + + + + RPVPL
Sbjct: 686 VASFLRVDLKNGLFIFDRSYRPVPL 710
Score = 79 (32.9 bits), Expect = 1.7e-05, Sum P(5) = 1.7e-05
Identities = 32/113 (28%), Positives = 50/113 (44%)
Query: 475 DVSLRPEASCLIMTTEI--LRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIM 532
D+ L + +I T E S ++ I+ + I DE+H + + G V E VI+
Sbjct: 1441 DLKLLEKGQIIISTPEKWDALSRRWKQRKYIQQVSLFIVDELHLIGG-QGGQVLE-VIVS 1498
Query: 533 LPRHIN--------IVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLE 577
R+I+ IV LS ++ N + +WIG + RPVPLE
Sbjct: 1499 RMRYISSQVGNKIRIVALSTSLANAKDLGEWIGASSCGVFNFPPNV-RPVPLE 1550
Score = 63 (27.2 bits), Expect = 2.1e-12, Sum P(5) = 2.1e-12
Identities = 37/143 (25%), Positives = 56/143 (39%)
Query: 111 EVPFRRQTKQGKWEPNSVDVS---ELMLGA--QDSG--PLPRVAGPAKDFVRGSINSRPF 163
EV T+ G ++P + + E+MLG Q G PL V G A + + N
Sbjct: 98 EVSVLNDTEDGVYQPKTKETRVAFEIMLGLIQQQLGGQPLDIVCGAADEILAVLKNESVK 157
Query: 164 RPGGLEDSQSLERILPDGA-----SNGEWVQEILKGGPAQVVPPSFKQGLDLGELQAYPC 218
+ + L ++ D S G+ + + +GG + S GLD A C
Sbjct: 158 NHEKKVEIEKLLNVITDQVFSQFVSIGKLITDYEEGGDSLSGKASEDGGLDYDIGVALEC 217
Query: 219 LWNVYKDQDQSSLKSTSDEKLNE 241
+D D+S L DEK E
Sbjct: 218 ----EEDDDESDLDMVQDEKDEE 236
Score = 46 (21.3 bits), Expect = 1.8e-06, Sum P(6) = 1.8e-06
Identities = 26/83 (31%), Positives = 37/83 (44%)
Query: 412 LENGDSVFVAAHTSAGKTVVAE----YAFAL-----AT-KHCT-RAVYTAPIKTISNQKY 460
L D++ + A T AGKT VA + L T H + VY AP+K + +
Sbjct: 518 LFKADNILLCAPTGAGKTNVAVLTILHQLGLNMNPGGTFNHGNYKIVYVAPMKALVAEVV 577
Query: 461 RDFSGKF-DVGL----LTGDVSL 478
S + D G+ L+GD SL
Sbjct: 578 DSLSQRLKDFGVTVKELSGDQSL 600
Score = 38 (18.4 bits), Expect = 2.1e-12, Sum P(5) = 2.1e-12
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 978 APSANNKEYIVMLLKPDLPSASETSLDKKS---GDFSEGYFVI 1017
+P A K+ ++ + DL ++ T LDK + D G+F +
Sbjct: 964 SPDALAKDLLLEERRADLIHSAATILDKNNLIKYDRKSGHFQV 1006
Score = 38 (18.4 bits), Expect = 1.8e-06, Sum P(6) = 1.8e-06
Identities = 26/106 (24%), Positives = 38/106 (35%)
Query: 651 VGIKNSGGSQNNWGLRRSEVSI-------WLTLINKLSKKSLLPVV-IFCFSKNHCDKLA 702
V +K G Q+ G E I W + K ++ +V + + H L
Sbjct: 589 VTVKELSGDQSLTGQEIKETQIIVTTPEKWDIITRKSGDRTYTQLVRLLIIDEIH---LL 645
Query: 703 DGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLR 748
D G L S ++ ++ K RL G LP V S LR
Sbjct: 646 DDNRGPVLESIVARTLRQIESTKEHIRLVGLSATLPNCDDVASFLR 691
Score = 37 (18.1 bits), Expect = 2.1e-12, Sum P(5) = 2.1e-12
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 1225 LFENQLDDLEPEEAVAI 1241
L EN L DLE + + I
Sbjct: 1816 LVENTLSDLEVSKCIEI 1832
>FB|FBgn0002905 [details] [associations]
symbol:mus308 "mutagen-sensitive 308" species:7227
"Drosophila melanogaster" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=ISS;NAS] [GO:0006281 "DNA repair" evidence=NAS;TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IMP] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IMP] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR003583 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00476 PRINTS:PR00868
PROSITE:PS51194 SMART:SM00278 SMART:SM00482 SMART:SM00490
EMBL:AE014297 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
GO:GO:0006200 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1204 GeneTree:ENSGT00640000091272
GO:GO:0006303 GO:GO:0006289 GO:GO:0008026 GO:GO:0003887 KO:K02349
OMA:EASIPEI EMBL:L76559 EMBL:BT044169 PIR:T13858 RefSeq:NP_524333.1
UniGene:Dm.23677 HSSP:P00582 SMR:O18475 STRING:O18475
EnsemblMetazoa:FBtr0082662 GeneID:41571 KEGG:dme:Dmel_CG6019
UCSC:CG6019-RA CTD:41571 FlyBase:FBgn0002905 InParanoid:O18475
OrthoDB:EOG4FJ6QM GenomeRNAi:41571 NextBio:824448 Uniprot:O18475
Length = 2059
Score = 201 (75.8 bits), Expect = 2.4e-12, Sum P(4) = 2.4e-12
Identities = 55/160 (34%), Positives = 86/160 (53%)
Query: 688 VVIFCFSKNHCDKLADGMS-GIDLTSSSEK---SEIRVFCD-KAFSRLKGSDRNLPQ-IV 741
V++FC SK+ C+ LA ++ I + SE +R + +A + +K R++P +
Sbjct: 474 VIVFCPSKDWCENLAVQLATAIHVQIKSETVLGQRLRTNLNPRAIAEVKQQLRDIPTGLD 533
Query: 742 RVQS-LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNL 800
V S + A HHAGL +++IE F G +KVL +T T + GVN PAR V+ +
Sbjct: 534 GVMSKAITYACAFHHAGLTTEERDIIEASFKAGALKVLVATSTLSSGVNLPARRVLIRS- 592
Query: 801 RKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRD 840
F G++ L Y QM GRAGR G D +G +++C +
Sbjct: 593 PLFGGKQMSSLT---YRQMIGRAGRMGKDTLGESILICNE 629
Score = 86 (35.3 bits), Expect = 2.4e-12, Sum P(4) = 2.4e-12
Identities = 50/205 (24%), Positives = 93/205 (45%)
Query: 397 FPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALAT-KHCTRAVYTAPIKTI 455
F ++++ K + + E+ + V+ +A TSAGKT+V+E + + + P ++
Sbjct: 233 FDWQVECLSKPRLLF-EHCNLVY-SAPTSAGKTLVSEILMLKTVLERGKKVLLILPFISV 290
Query: 456 SNQK--Y-RDF---SGKFDVGLLTGDV------SLRPEASCLI-MTTEILRSMLYRGADI 502
+K Y +D +G G G SL A C I I+ ++ +G
Sbjct: 291 VREKMFYMQDLLTPAGYRVEGFYGGYTPPGGFESLHV-AICTIEKANSIVNKLMEQGK-- 347
Query: 503 IRDIEWVIFDEVHYVNDIERGVVWE----EVIIMLPRH---INIVLLSATVPNTVEFADW 555
+ I V+ DEVH ++D RG + E +++ M R+ I ++ +SAT+ N W
Sbjct: 348 LETIGMVVVDEVHLISDKGRGYILELLLAKILYMSRRNGLQIQVITMSATLENVQLLQSW 407
Query: 556 IGRTKQKKIRVTGTTKRPVPLEHCL 580
+ ++ +T RPV L+ +
Sbjct: 408 L----DAELYITNY--RPVALKEMI 426
Score = 42 (19.8 bits), Expect = 2.4e-12, Sum P(4) = 2.4e-12
Identities = 17/71 (23%), Positives = 34/71 (47%)
Query: 1151 EHMKLTKENKRHKDEVN-TLKFQMSDEALQQMPDFQGRIDVLKE---IGCIDADLVVQIK 1206
EH+K N+ + VN T++ +D A + + I+ +E +G DLV+ +
Sbjct: 1953 EHLK----NQAERQAVNSTIQGSAADIAKNAILKMEKNIERYREKLALGDNSVDLVMHLH 2008
Query: 1207 GRVACEMNSGE 1217
+ E+ +G+
Sbjct: 2009 DELIFEVPTGK 2019
Score = 39 (18.8 bits), Expect = 2.4e-12, Sum P(4) = 2.4e-12
Identities = 11/65 (16%), Positives = 31/65 (47%)
Query: 184 NGEWVQEILKGGPAQVVPPSFKQGLDLGELQAYPCLWNVYKDQDQSSLKSTSDEKLNELS 243
N E+ ++ Q P+ + +++ ++Q + + + +DQS + +D+ + S
Sbjct: 53 NSEFFRDEFSYEVNQAHKPAEQSVVNVSQVQQHMAVVSNQDSEDQSRSSALNDQICTQSS 112
Query: 244 VQFDD 248
+ +D
Sbjct: 113 FEGED 117
Score = 37 (18.1 bits), Expect = 7.5e-12, Sum P(4) = 7.5e-12
Identities = 12/68 (17%), Positives = 33/68 (48%)
Query: 1147 IKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIG-----CIDADL 1201
+K+E++++ +E D L + DE + ++P + + + K + C+ +
Sbjct: 1981 LKMEKNIERYREKLALGDNSVDLVMHLHDELIFEVPTGKAK-KIAKVLSLTMENCVKLSV 2039
Query: 1202 VVQIKGRV 1209
+++K R+
Sbjct: 2040 PLKVKLRI 2047
>UNIPROTKB|O75417 [details] [associations]
symbol:POLQ "DNA polymerase theta" species:9606 "Homo
sapiens" [GO:0006260 "DNA replication" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IDA]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IDA] [GO:0003684 "damaged DNA binding" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271
Pfam:PF00476 PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194
SMART:SM00482 SMART:SM00490 GO:GO:0005524 GO:GO:0005654
GO:GO:0003684 GO:GO:0006260 GO:GO:0006281 SUPFAM:SSF53098
EMBL:AC069239 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1204 GO:GO:0008026 GO:GO:0003887 GO:GO:0043142
EMBL:AF052573 EMBL:AY338826 EMBL:AC079841 EMBL:AF043628
IPI:IPI00794779 IPI:IPI01012356 RefSeq:NP_955452.3
UniGene:Hs.241517 ProteinModelPortal:O75417 STRING:O75417
PhosphoSite:O75417 PaxDb:O75417 PRIDE:O75417 DNASU:10721
Ensembl:ENST00000264233 GeneID:10721 KEGG:hsa:10721 UCSC:uc003eed.3
UCSC:uc003eee.4 CTD:10721 GeneCards:GC03M121150 H-InvDB:HIX0030706
HGNC:HGNC:9186 HPA:HPA048931 MIM:604419 neXtProt:NX_O75417
PharmGKB:PA33506 HOGENOM:HOG000146444 HOVERGEN:HBG005525 KO:K02349
OrthoDB:EOG42RD6C ChEMBL:CHEMBL6025 GenomeRNAi:10721 NextBio:40701
ArrayExpress:O75417 Bgee:O75417 CleanEx:HS_POLH CleanEx:HS_POLQ
Genevestigator:O75417 GermOnline:ENSG00000051341 Uniprot:O75417
Length = 2590
Score = 203 (76.5 bits), Expect = 3.9e-12, Sum P(4) = 3.9e-12
Identities = 57/163 (34%), Positives = 88/163 (53%)
Query: 688 VVIFCFSKNHCDKLADGMSG--IDLTSSSE----KSEIR--VFCDKAFSRLKGSDRNLPQ 739
V++FC SK C+KLAD ++ +L +E SE + K + R LP
Sbjct: 340 VLLFCPSKKWCEKLADIIAREFYNLHHQAEGLVKPSECPPVILEQKELLEVMDQLRRLPS 399
Query: 740 IVR--VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVF 797
+ +Q + G+A HHAGL +++IE F +G+++VL +T T + GVN PAR V+
Sbjct: 400 GLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVII 459
Query: 798 DNLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRD 840
F GR L Y QM GRAGR+G+D +G +++C++
Sbjct: 460 -RTPIFGGRPLDILT---YKQMVGRAGRKGVDTVGESILICKN 498
Score = 76 (31.8 bits), Expect = 3.9e-12, Sum P(4) = 3.9e-12
Identities = 33/124 (26%), Positives = 56/124 (45%)
Query: 415 GDSVFVAAHTSAGKTVVAEYAFALATKHCTR-AVYTAPIKTISNQKYRDFSGKF-DVGLL 472
G ++ +A TSAGKT+VAE + A++ P +++ +K F +VG+
Sbjct: 108 GKNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIK 167
Query: 473 T----GDVSLRPEASCL---IMTTEILRSMLYRGADIIR-DI-EWVIFDEVHYVNDIERG 523
G S S L + T E ++ R + + D+ V+ DE+H + D RG
Sbjct: 168 VDGYMGSTSPSRHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRG 227
Query: 524 VVWE 527
+ E
Sbjct: 228 YLLE 231
Score = 53 (23.7 bits), Expect = 3.9e-12, Sum P(4) = 3.9e-12
Identities = 17/55 (30%), Positives = 23/55 (41%)
Query: 533 LPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGEFY 587
L + IV +SAT+PN A W+ + T RPVPL + Y
Sbjct: 255 LSNAVQIVGMSATLPNLELVASWLNA------ELYHTDFRPVPLLESVKVGNSIY 303
Score = 39 (18.8 bits), Expect = 1.6e-11, Sum P(5) = 1.6e-11
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 1334 LDETCREFRNAAAIMGNSALYKK 1356
LDE EFRN+ N +L K
Sbjct: 1084 LDEKKTEFRNSGPFAKNVSLSGK 1106
Score = 39 (18.8 bits), Expect = 1.6e-11, Sum P(5) = 1.6e-11
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 1307 WAK-GTPFADICELTDVPEGLIVRTI 1331
W K T + EL V EG + R +
Sbjct: 673 WEKLPTSMKRVAELVGVEEGFLARCV 698
Score = 38 (18.4 bits), Expect = 3.9e-12, Sum P(4) = 3.9e-12
Identities = 14/67 (20%), Positives = 26/67 (38%)
Query: 1057 EVRGIDKKELLCICNCKIKIDQVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKD 1116
EV + LC+ IK V +D + ++ + D + +ALD V
Sbjct: 1516 EVTSNHFSDSLCLQEDLIKKSNVNENQDTHQQLTCSNDESIIFSEMDSVQMVEALDNVDI 1575
Query: 1117 LKLKDMN 1123
+++ N
Sbjct: 1576 FPVQEKN 1582
>ZFIN|ZDB-GENE-040724-232 [details] [associations]
symbol:si:rp71-1p14.5 "si:rp71-1p14.5" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001098 InterPro:IPR001650
InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 ZFIN:ZDB-GENE-040724-232 GO:GO:0005524 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00640000091272 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0003887 EMBL:CU928848
EMBL:CU695000 IPI:IPI00492363 Ensembl:ENSDART00000065556
Uniprot:F1Q4P4
Length = 2576
Score = 203 (76.5 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 55/162 (33%), Positives = 88/162 (54%)
Query: 689 VIFCFSKNHCDKLADGMSGI-------DLTSSSEKSEIRVFCD---KAFSRLKGSDRNLP 738
++FC SKN C+KLAD + ++ S S I + + ++LK + L
Sbjct: 546 LLFCPSKNWCEKLADSIGREFYNLHHKEMQSGSGGQSISLNQEGLLDVLAQLKRTPAGLD 605
Query: 739 QIVRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFD 798
++ Q + G+A HHAGL ++++E F +G ++VL +T T + GVN PAR V+
Sbjct: 606 HVL--QRTVPWGVAFHHAGLTFDERDILEGAFRQGYIRVLAATSTLSSGVNLPARRVII- 662
Query: 799 NLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRD 840
F+G +L Y QM GRAGR+G+D IG V++C++
Sbjct: 663 RTPVFNGH-LLDILT--YKQMVGRAGRKGVDTIGESVLVCKE 701
Score = 79 (32.9 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 36/136 (26%), Positives = 63/136 (46%)
Query: 415 GDSVFVAAHTSAGKTVVAEYAF---ALATKHCTRAVYTAPIKTISNQKYRDFSGKF-DVG 470
G ++ +A TSAGKT+V+E L T+ +A++ P +++ +K F + G
Sbjct: 315 GQNLVYSAPTSAGKTLVSELLILKRVLETRQ--KAMFILPFVSVAREKMFYLQNVFQEAG 372
Query: 471 LLT----GDVSLRPEASCL---IMTTEILRSMLYR--GADIIRDIEWVIFDEVHYVNDIE 521
+ G S S L + T E ++ R D + + V+ DE+H V D
Sbjct: 373 IRVEGYMGSTSAAGGFSALDVAVCTIEKANGLVNRLIEEDKLDLLGTVVVDELHMVGDSG 432
Query: 522 RGVVWEEVIIMLPRHI 537
RG + E ++ + R+I
Sbjct: 433 RGYLLELLLTKI-RYI 447
Score = 56 (24.8 bits), Expect = 9.6e-10, Sum P(3) = 9.6e-10
Identities = 24/84 (28%), Positives = 37/84 (44%)
Query: 509 VIFDEVHYVNDIERGVVWEEVIIML--------PRH--------INIVLLSATVPNTVEF 552
V+ DE+H V D RG + E ++ + R+ + I+ +SAT+PN
Sbjct: 420 VVVDELHMVGDSGRGYLLELLLTKIRYIAQKTATRNSGQSTSTGVQIIGMSATLPNLDLL 479
Query: 553 ADWIGRTKQKKIRVTGTTKRPVPL 576
A W+ + T RPVPL
Sbjct: 480 ARWLSA------ELYSTNYRPVPL 497
Score = 38 (18.4 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 16/56 (28%), Positives = 20/56 (35%)
Query: 1267 RLYNTAIRLGELQAHFKVQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDV 1322
R+Y L A +V D E N G +E EW F I + DV
Sbjct: 754 RMYAACTLLAASIAAEEVHQDGSESEARNK--GAIEACIEWLMDNEFIHIQKEGDV 807
Score = 37 (18.1 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 1057 EVRGIDKKELLCICNCKIKIDQVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQALDPV 1114
E + +E + + K +I++ G +VS + TVQ V SD Q L+PV
Sbjct: 1700 EPNAVVLEEAVSLTKTK-EIEKEG--PEVSRSEDFVTVQAKKVTPSDLVPPTQVLEPV 1754
>WB|WBGene00020964 [details] [associations]
symbol:polq-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001098
InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1204
GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003887 KO:K02349
EMBL:FO081687 EMBL:FO081686 RefSeq:NP_498250.3
ProteinModelPortal:A0FLQ6 PaxDb:A0FLQ6 EnsemblMetazoa:W03A3.2
GeneID:175810 KEGG:cel:CELE_W03A3.2 UCSC:W03A3.2 CTD:175810
WormBase:W03A3.2 InParanoid:A0FLQ6 OMA:EASIPEI NextBio:889766
Uniprot:A0FLQ6
Length = 1661
Score = 149 (57.5 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 68/217 (31%), Positives = 97/217 (44%)
Query: 630 DGARAQKREHPNRGKQNKHSVVG--IKNSGGSQNNWGLRR-SEVSIWLTLINKLSKKSLL 686
DGA+ + QN H V+G ++ SG +N LR SE + L + S
Sbjct: 201 DGAKVFEARFRPIVLQN-HIVIGSELRKSG---DNKVLREFSEDPLILLTEESFRRNSQT 256
Query: 687 PVVIFCFSKNHCDKLADGM-SGIDLTSSSEKSEIRVFCDKAFSRL---KGSDRNLPQIVR 742
V+I SK +K A + S + ++ S + + ++A L G +RN +
Sbjct: 257 LVMIS--SKLDAEKTALNIASRFHEINKTDSSLLEILKERANGLLFIKHGLERNGCKDRN 314
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK 802
V S L G+A HHAGL +E IE+ F + +L +T T A GVN PA V+ K
Sbjct: 315 VMSTLAWGVAYHHAGLTMEERECIELGFREKNIVILVATSTLASGVNLPAERVLI----K 370
Query: 803 FDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCR 839
R L Y QM GRAGR G G +L +
Sbjct: 371 AQPRGPSALTSLNYRQMVGRAGRTGHATRGETYLLIK 407
Score = 111 (44.1 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 50/212 (23%), Positives = 92/212 (43%)
Query: 397 FPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTIS 456
F +++D EA + E+ +F +A TSAGK++VAE + ++ P +++
Sbjct: 29 FDWQIDVLN-EARQF-EDQHLIF-SAPTSAGKSIVAELLSWKVASTGRKVLFVLPYISVA 85
Query: 457 NQKYRDFSG---KFDVGL--LTGDVSLRP-EASCLIMTTEILRSMLYRGA--DIIRDIEW 508
+K + D+ + G + P E + T E S+ R D +I
Sbjct: 86 REKLHQIQRCWRRDDISVCGFIGPQASNPNEWLGAVCTIEKAASLTNRALSEDWFEEIGM 145
Query: 509 VIFDEVHYVNDIERGVVWEEVI--IMLPRH-----INIVLLSATVPNTVEFADWIGRTKQ 561
++ DE+H V D RG E ++ ++L + I+ +SAT+P W+ K
Sbjct: 146 IVVDEMHMVFDSSRGAHIEHMLSKVLLWNQSALEKVRIIGMSATIPELYRIGKWLDGAKV 205
Query: 562 KKIRVTGTTKRPVPLEHCLYYSGEFYKVCENE 593
+ R RP+ L++ + E K +N+
Sbjct: 206 FEARF-----RPIVLQNHIVIGSELRKSGDNK 232
Score = 54 (24.1 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 1227 ENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPK-LSVAKER-LYNTAIRLGELQAHFKV 1284
E D+LE +E + M ++ +E SLT +S E L+ I++ E + K
Sbjct: 851 EGMEDELEEKENIVKMEEMT---KSVTEMSLTDNTISFKSEDDLFKKEIKVEEDEVFIKK 907
Query: 1285 QIDPEE 1290
+ID +E
Sbjct: 908 EIDEDE 913
Score = 49 (22.3 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 979 PSANNKEYIVMLLKPDLPSASETSLDKKSGDFSE-GYFVIPKSKRGLEEEYCGSVSHRKG 1037
P ++++ V+ +L S+ S++ + D + FV P +K EE+ +V H +
Sbjct: 1006 PISSSRRKSVLTNIANLDSSRRESINSNASDNNSFDVFVTPPTKSAKEEKRRIAVKHPRV 1065
Query: 1038 SGVI 1041
+I
Sbjct: 1066 GNII 1069
>UNIPROTKB|F1NYH9 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 SUPFAM:SSF47794 GO:GO:0008026
OMA:SRPLENC EMBL:AADN02009041 IPI:IPI00596471
Ensembl:ENSGALT00000018274 Uniprot:F1NYH9
Length = 995
Score = 174 (66.3 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 73/233 (31%), Positives = 111/233 (47%)
Query: 689 VIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVR--VQSL 746
+IFC +K +C+ +A + E R +K L +NL I + +
Sbjct: 488 LIFCPTKKNCENVAT------MVCKYLNKEFRAHREKEKQDLI---KNLKDIGNGSICPV 538
Query: 747 LRR----GIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK 802
LR+ G+A HH+GL ++ IE + RGV+ +L T T A GVN PAR V+ LR
Sbjct: 539 LRQTIPFGVAYHHSGLTNDERKSIEEAYSRGVLCLLACTATLAAGVNLPARRVI---LRA 595
Query: 803 -FDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATR-LE 860
+ EF L +Y QM GRAGR G+D G +++ + E D KH++ T LE
Sbjct: 596 PYVASEF--LKKNQYKQMIGRAGRAGIDNAGESILVVQ-----EKD-KHLVRDLITSPLE 647
Query: 861 SQF-----RLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRK 908
+ + +T M LL + LK+ + + F L QQQLL+++
Sbjct: 648 NCYSNLLPEITKGMQYLLLSLVGLKIA-VTQEEVYSFMCHTLLGVQQQLLLKE 699
Score = 82 (33.9 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 50/200 (25%), Positives = 85/200 (42%)
Query: 412 LENGDSVFVAAHTSAGKTVVAEYAFALATKHCTR--AVYTAPIKTISNQKYRDFSG-KFD 468
L+ ++ + TS GKT+VAE L C + + P I +K S +
Sbjct: 256 LQQRKNLIYSLPTSGGKTLVAEILI-LQELLCRQKDVLMILPYVAIVQEKVWGLSSFGIE 314
Query: 469 VGLLTGD----------VSLRPEASCLIMTTE----ILRSMLYRGADIIRDIEWVIFDEV 514
+G L + + R + S I T E ++ S++ D I D+ V+ DE+
Sbjct: 315 LGFLVEEYAGSKGRFPPIKRRIKKSLYIATIEKGHALVNSLIE--TDRIDDLGLVVVDEL 372
Query: 515 HYVNDIERGVVWEEV---IIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTK 571
H + + RG V E I+ ++ ++V +SAT+ N + QK ++ TK
Sbjct: 373 HMIGEGSRGAVLEMTLAKILYASKNTHVVGMSATLNNVGDL--------QKFLQAEYYTK 424
Query: 572 --RPVPLEHCLYYSGEFYKV 589
RPV L+ + Y+V
Sbjct: 425 NFRPVELKEYIKIRDTIYEV 444
>DICTYBASE|DDB_G0290389 [details] [associations]
symbol:ascc3 "activating signal cointegrator 1
complex subunit" species:44689 "Dictyostelium discoideum"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 dictyBase:DDB_G0290389 GO:GO:0005524
GO:GO:0006355 GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0008026 EMBL:AAFI02000163 RefSeq:XP_635715.1
ProteinModelPortal:Q54G57 EnsemblProtists:DDB0233132 GeneID:8627633
KEGG:ddi:DDB_G0290389 InParanoid:Q54G57 KO:K15271
ProtClustDB:CLSZ2429672 Uniprot:Q54G57
Length = 2195
Score = 179 (68.1 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 64/219 (29%), Positives = 105/219 (47%)
Query: 654 KNSGGSQNNWGLRRSEVSIWLTLINKLSK--KSLLPVVIFCFSKNHCDKLADGMSGIDLT 711
+N G ++N G+ + ++ +L K K V+IF S+ K A+ +S D+
Sbjct: 688 QNFIGVKDNQGIMVMKNNMNQLCYERLEKSLKEGHQVMIFVHSRKDTVKSAEILS--DMA 745
Query: 712 SSSE---KSEIRVF-CDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIVKEVIE 767
+E F K F ++K + ++SL + GI++HHAGLL + V+E
Sbjct: 746 KEKHFRFSNEEPSFGAKKEFEKVKSKE--------IRSLFQHGISVHHAGLLRSDRNVVE 797
Query: 768 MLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGRE--FRQLLPGEYTQMAGRAGR 825
F G +KVL T T A GVN PA TV+ + ++ + F L + Q+ GRAGR
Sbjct: 798 KYFANGTIKVLVCTATLAWGVNLPAHTVIIKGTQVYNAKNGGFMDLGISDVMQIFGRAGR 857
Query: 826 RGLDKIGTVVVLC-RDEIPGESDLKHIIVGSATRLESQF 863
D G +L +D++ D ++ S+ +ES+F
Sbjct: 858 PQFDTSGEGFLLTSKDKL----DHYLSLMSSSMPIESKF 892
Score = 166 (63.5 bits), Expect = 9.8e-11, Sum P(4) = 9.8e-11
Identities = 45/117 (38%), Positives = 61/117 (52%)
Query: 731 KGSDRNLPQIVRVQSL-LRR----GIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFA 785
KG D P + RV+ LR GI +HHAGL + ++E LF +++L ST T A
Sbjct: 1591 KGFDIE-PTLARVKDQHLRHTLSFGIGMHHAGLNDGDRTIVESLFGENKIQILISTSTLA 1649
Query: 786 MGVNAPARTVVFDNLRKFDGREFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCRD 840
GVN PA V+ FDG+ R + P + QM GRAGR DK G +V+ +
Sbjct: 1650 WGVNLPAHLVIIKGTEYFDGKTKRYVDFPLTDVLQMIGRAGRPQFDKEGKAMVMVHE 1706
Score = 108 (43.1 bits), Expect = 9.8e-11, Sum P(4) = 9.8e-11
Identities = 36/136 (26%), Positives = 65/136 (47%)
Query: 409 IYYLENGDSVFVAAHTSAGKTVVAEYAF--ALATKHCTRAVYTAPIKTISNQKYRDFSGK 466
+YY N +V + + T +GKT+ AE A + + VY AP+K + ++ D+ K
Sbjct: 1338 LYYTNN--NVLLGSPTGSGKTICAELAMFKVFRDEPHMKVVYIAPLKALVRERMNDWKVK 1395
Query: 467 FDVGL------LTGDVSLRPEA--SCLIMTTEILR----SMLYRGADIIRDIEWVIFDEV 514
F L LTGD + A + I+TT + S ++ + + +I DE+
Sbjct: 1396 FQEKLGKKLVELTGDYTPNMIALQNADIVTTTPEKWDGISRNWKNRSYVTSVSLLIIDEI 1455
Query: 515 HYVNDIERGVVWEEVI 530
H + ++ RG + E ++
Sbjct: 1456 HLIGEL-RGPILEVIV 1470
Score = 96 (38.9 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 445 RAVYTAPIKTISNQ-KYRDFSGKFDVGLLTGDVSLRP----EASCLIMTTEILRSMLYRG 499
+A+ + ++ SN KY K LTGD+ L E ++ T E + +
Sbjct: 547 KALASEMVEKFSNSLKYLGIVSKE----LTGDMQLTQKELKETQIIVTTPEKWDVITRKS 602
Query: 500 ADII--RDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRH-------INIVLLSATVPNTV 550
+D+ + + +I DE+H +++ ERG V E ++ R I IV LSAT+PN
Sbjct: 603 SDVALTKLVRLIIIDEIHLLHE-ERGPVLECIVARTLRQVETTQEMIRIVGLSATLPNYK 661
Query: 551 EFADWIGRTKQKKIRVTGTTKRPVPL 576
+ A +I R ++ RPVPL
Sbjct: 662 DVARFI-RAPASGTHFFDSSYRPVPL 686
Score = 88 (36.0 bits), Expect = 9.2e-09, Sum P(4) = 9.2e-09
Identities = 35/143 (24%), Positives = 68/143 (47%)
Query: 459 KYRDFSGKFDVGLLTGDVSLRPEA--SCLIMTTEILR----SMLYRGADIIRDIEWVIFD 512
K+++ GK V L TGD + A + I+TT + S ++ + + +I D
Sbjct: 1395 KFQEKLGKKLVEL-TGDYTPNMIALQNADIVTTTPEKWDGISRNWKNRSYVTSVSLLIID 1453
Query: 513 EVHYVNDIERGVVWEEVIIMLPR-------HINIVLLSATVPNTVEFADWIGRTKQKKIR 565
E+H + ++ RG + E ++ + +I +V LS + N ++ ++W+G +
Sbjct: 1454 EIHLIGEL-RGPILEVIVSRMKLISKQTGVNIRVVGLSTAMANAIDLSEWMGIDRVGLFN 1512
Query: 566 VTGTTKRPVPLE-HCLYYSGEFY 587
+ RPVP+E H + G+ Y
Sbjct: 1513 FRPSC-RPVPIEVHIQGFQGKNY 1534
Score = 61 (26.5 bits), Expect = 2.7e-07, Sum P(4) = 2.7e-07
Identities = 22/88 (25%), Positives = 42/88 (47%)
Query: 407 EAIYYLENGDSVFVAAHTSAGKTVVAEYA-----------FALATKHCTRAVYTAPIKTI 455
E+ Y ++ +++ ++A T AGKT +A + K + +Y AP+K +
Sbjct: 492 ESAY--KSNENILISAPTGAGKTNIALLTILHEIESNINPYGYLDKDNFKIIYIAPLKAL 549
Query: 456 SNQKYRDFSGKFD-VGL----LTGDVSL 478
+++ FS +G+ LTGD+ L
Sbjct: 550 ASEMVEKFSNSLKYLGIVSKELTGDMQL 577
Score = 52 (23.4 bits), Expect = 2.7e-07, Sum P(4) = 2.7e-07
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 515 HYVNDIERGVVWEEVIIM-LPRHINIVLLSATVPNTVEFADWIGRT 559
HY++ + + E I L H+N ++ TV N E +W+ T
Sbjct: 877 HYLSLMSSSMPIESKFITNLEDHLNAEIVLGTVSNVNEAVNWLSYT 922
Score = 40 (19.1 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 164 RPGGLEDSQSLERILPDGASN 184
+PG ++ S+ L+++ G SN
Sbjct: 238 QPGQIKKSKKLKKLAAAGGSN 258
Score = 40 (19.1 bits), Expect = 9.8e-11, Sum P(4) = 9.8e-11
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 256 EDVAEFEKDDWLPNRI 271
+ + + E+ DW P RI
Sbjct: 1136 DTIRKIEERDWTPERI 1151
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 231 LKSTSDEKLNELSVQFDDLFKKAWEEDVAEFEKDDWLPNRIKI 273
LK+ E++N+ V+F + K E D+ PN I +
Sbjct: 1381 LKALVRERMNDWKVKFQEKLGKKLVELTG-----DYTPNMIAL 1418
>ZFIN|ZDB-GENE-060503-421 [details] [associations]
symbol:helq "helicase, POLQ-like" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR010995 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-060503-421 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 SUPFAM:SSF47794 GO:GO:0008026
EMBL:BX649525 CTD:113510 IPI:IPI00799443 RefSeq:XP_691411.3
UniGene:Dr.86132 Ensembl:ENSDART00000109412 GeneID:562952
KEGG:dre:562952 NextBio:20884669 Uniprot:F1Q4P2
Length = 1010
Score = 177 (67.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 51/155 (32%), Positives = 81/155 (52%)
Query: 689 VIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAF--SRLKGSDRNLPQIVRVQSL 746
+IFC +K +C+ LA GM L K + +KA LK S V +Q
Sbjct: 502 LIFCATKKNCENLA-GMICKYLNKEFIKHKE---AEKAILLGELKSSGNGSLCPV-LQKT 556
Query: 747 LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGR 806
+ G+A HH+GL ++++E + GV+ +L T T A G+N PAR V+ + +
Sbjct: 557 IPFGLAYHHSGLTSDERKLVEEAYSSGVLCLLTCTSTLAAGINLPARRVILRS--PYVAA 614
Query: 807 EFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDE 841
+F L +Y QM GRAGR G+D +G +++ +D+
Sbjct: 615 DF--LKRSQYKQMVGRAGRAGIDAMGESILILQDK 647
Score = 77 (32.2 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 48/190 (25%), Positives = 79/190 (41%)
Query: 424 TSAGKTVVAEYAFALATKHCTR--AVYTAPIKTISNQKYRDFSG-----KFDVGLLTGD- 475
TS GKT+VAE C + A+ P ++ +K R S F V G
Sbjct: 282 TSGGKTLVAEILI-FKELLCRKKDALLILPYISLVQEKVRGLSSFGIELDFLVEEYAGSK 340
Query: 476 -----VSLRPEASCLIMTTE----ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVW 526
V R + S I T E ++ S++ D + +I V+ DE+H + D RG +
Sbjct: 341 GKFPPVKRRNKNSLYITTIEKGHSLVNSLIEN--DRLDNIGLVVVDELHMLGDGSRGAIL 398
Query: 527 EEV---IIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYS 583
E I+ + + ++ +SAT+ N + ++ R + T RPV L+ +
Sbjct: 399 EMTLSKILYMSKSTQVIGMSATLGNVKDLQSFL-RAEN----YTNNF-RPVELKEYVKIK 452
Query: 584 GEFYKVCENE 593
Y+V E
Sbjct: 453 DSIYEVDPKE 462
>TAIR|locus:2037375 [details] [associations]
symbol:emb1507 "embryo defective 1507" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007126
"meiosis" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 EMBL:CP002684 GO:GO:0005829
GO:GO:0005524 GO:GO:0005730 GO:GO:0016020 GO:GO:0003676
GO:GO:0030529 EMBL:AC007369 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 HOGENOM:HOG000157749 KO:K12854 OMA:KWDVLSR
GO:GO:0008026 ProtClustDB:CLSN2679454 IPI:IPI00536616 PIR:E86342
RefSeq:NP_001185050.1 RefSeq:NP_173520.1 UniGene:At.11196
UniGene:At.21273 ProteinModelPortal:Q9SYP1 SMR:Q9SYP1 IntAct:Q9SYP1
STRING:Q9SYP1 PRIDE:Q9SYP1 ProMEX:Q9SYP1 EnsemblPlants:AT1G20960.1
EnsemblPlants:AT1G20960.2 GeneID:838690 KEGG:ath:AT1G20960
TAIR:At1g20960 InParanoid:Q9SYP1 PhylomeDB:Q9SYP1
Genevestigator:Q9SYP1 Uniprot:Q9SYP1
Length = 2171
Score = 188 (71.2 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 57/181 (31%), Positives = 95/181 (52%)
Query: 688 VVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSR-LKGSDRNLPQIVRVQSL 746
V+IF S+ K A + T+ + + R + + +R + S ++ + ++ +
Sbjct: 745 VLIFVHSRKETSKTARAIRD---TAMANDTLSRFLKEDSVTRDVLHSHEDIVKNSDLKDI 801
Query: 747 LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGR 806
L G AIHHAGL +E++E LF +G V+VL ST T A GVN PA TV+ + ++
Sbjct: 802 LPYGFAIHHAGLSRGDREIVETLFSQGHVQVLVSTATLAWGVNLPAHTVIIKGTQVYNPE 861
Query: 807 E--FRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHII--VGSATRLESQ 862
+ + +L P + QM GRAGR D+ G ++ I G S+L++ + + +ESQ
Sbjct: 862 KGAWMELSPLDVMQMLGRAGRPQYDQHGEGII-----ITGYSELQYYLSLMNEQLPIESQ 916
Query: 863 F 863
F
Sbjct: 917 F 917
Score = 139 (54.0 bits), Expect = 6.2e-10, Sum P(3) = 6.2e-10
Identities = 49/147 (33%), Positives = 75/147 (51%)
Query: 409 IYYLENGDSVFVAAHTSAGKTVVAEYAFALATKH----CT-RAVYTAPIKTISNQKYRDF 463
+ Y N D+V VAA T +GKT+ AE+A L H T R VY AP++ I+ +++R +
Sbjct: 1361 VLYNTN-DNVLVAAPTGSGKTICAEFAI-LRNHHEGPDATMRVVYIAPLEAIAKEQFRIW 1418
Query: 464 SGKFDVGL------LTG----DVSLRPEASCLIMTTEI--LRSMLYRGADIIRDIEWVIF 511
GKF GL LTG D+ L + +I T E S ++ ++ + I
Sbjct: 1419 EGKFGKGLGLRVVELTGETALDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIV 1478
Query: 512 DEVHYVNDIERGVVWEEVIIMLPRHIN 538
DE+H + + G V E VI+ R+I+
Sbjct: 1479 DELHLIGG-QHGPVLE-VIVSRMRYIS 1503
Score = 122 (48.0 bits), Expect = 6.2e-10, Sum P(3) = 6.2e-10
Identities = 51/187 (27%), Positives = 82/187 (43%)
Query: 683 KSLLPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVR 742
K+ P ++F ++ H ++ +DL + S + D +L+ D + QI R
Sbjct: 1580 KNKKPAIVFVPTRKHVR-----LTAVDLMAYSHMDNPQS-PDFLLGKLEELDPFVEQI-R 1632
Query: 743 VQSL---LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDN 799
++L L GI H GL + +E++ LF G ++V + + G A VV
Sbjct: 1633 EETLKETLCHGIGYLHEGLSSLDQEIVTQLFEAGRIQVCVMSSSLCWGTPLTAHLVVVMG 1692
Query: 800 LRKFDGREFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSAT 857
+ +DGRE P + QM GRA R LD G V+ C P + K + A
Sbjct: 1693 TQYYDGRENSHSDYPVPDLLQMMGRASRPLLDNAGKCVIFCH--APRKEYYKKFLY-EAF 1749
Query: 858 RLESQFR 864
+ESQ +
Sbjct: 1750 PVESQLQ 1756
Score = 89 (36.4 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 46/150 (30%), Positives = 74/150 (49%)
Query: 445 RAVYTAPIKTISNQKYRDFSGKFDVGLLTGDVSLRP---EASCLIMTTEILRSMLYR-GA 500
+A+ + +SN + +D+ G V L+GD SL E + +I+TT ++ R
Sbjct: 569 KALVAEVVGNLSN-RLKDY-GVI-VRELSGDQSLTGREIEETQIIVTTPEKWDIITRKSG 625
Query: 501 D--IIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHI-----NIVL--LSATVPNTVE 551
D + + +I DE+H ++D RG V E ++ R I NI L LSAT+PN +
Sbjct: 626 DRTYTQLVRLLIIDEIHLLHD-NRGPVLESIVARTLRQIETTKENIRLVGLSATLPNYED 684
Query: 552 FADWIGRTKQKKIRVTGTTKRPVPLEHCLY 581
A ++ +K + + RPVPL H Y
Sbjct: 685 VALFLRVDLKKGLFKFDRSYRPVPL-HQQY 713
Score = 81 (33.6 bits), Expect = 0.00051, Sum P(4) = 0.00051
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 475 DVSLRPEASCLIMTTEI--LRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIM 532
D+ L + +I T E S ++ ++ + I DE+H + + G V E VI+
Sbjct: 1440 DLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIVDELHLIGG-QHGPVLE-VIVS 1497
Query: 533 LPRHIN--------IVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLE 577
R+I+ IV LS ++ N + +WIG + RPVPLE
Sbjct: 1498 RMRYISSQVINKIRIVALSTSLANAKDLGEWIGASSHGLFNFPPGV-RPVPLE 1549
Score = 47 (21.6 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 978 APSANNKEYIVMLLKPDLPSASETSLDKKS---GDFSEGYFVI 1017
AP A K+ ++ + DL ++ T LDK + D GYF +
Sbjct: 963 APDALAKDVVLEERRADLIHSAATILDKNNLVKYDRKSGYFQV 1005
Score = 46 (21.3 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 24/83 (28%), Positives = 36/83 (43%)
Query: 412 LENGDSVFVAAHTSAGKTVVAEYAFA--LATKHCT---------RAVYTAPIKTISNQKY 460
L +++ + A T AGKT VA L T + VY AP+K + +
Sbjct: 517 LFKAENILLCAPTGAGKTNVAMLTILQQLEMNRNTDGTYNHGDYKIVYVAPMKALVAEVV 576
Query: 461 RDFSGKF-DVGL----LTGDVSL 478
+ S + D G+ L+GD SL
Sbjct: 577 GNLSNRLKDYGVIVRELSGDQSL 599
Score = 37 (18.1 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 1225 LFENQLDDLEPEEAVAI 1241
L EN L DLE + + +
Sbjct: 1815 LVENTLSDLEASKCIEV 1831
>CGD|CAL0003134 [details] [associations]
symbol:orf19.3980 species:5476 "Candida albicans" [GO:0042788
"polysomal ribosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 CGD:CAL0003134 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0008026 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721889.1 RefSeq:XP_722050.1 ProteinModelPortal:Q5AK41
STRING:Q5AK41 GeneID:3636313 GeneID:3636419 KEGG:cal:CaO19.11463
KEGG:cal:CaO19.3980 Uniprot:Q5AK41
Length = 1929
Score = 167 (63.8 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 56/198 (28%), Positives = 91/198 (45%)
Query: 647 KHSVVGIKNSGGSQNNWGLRRSEVSIWLTLINKLSK--KSLLPVVIFCFSKNHCDKLADG 704
+ ++G++ GS+ L R + KL+ L V++F S+ D +
Sbjct: 469 QQQILGVRGKAGSK----LARENID--KVSYEKLADYINQGLQVMVFVHSRK--DTVNTA 520
Query: 705 MSGIDLTSSSEKSEIRVFCDKA--FSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGLLPIV 762
+ I + +SEI C +A + + K N + ++ L G +HHAG+L
Sbjct: 521 RTFIRMAVEYGESEI-FNCSEADSYEKYKREASNKNRSKELKELFVHGFGVHHAGMLRSD 579
Query: 763 KEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGRE--FRQLLPGEYTQMA 820
+ + E +F G +KVL T T A GVN PA V+ + +D + F L + Q+
Sbjct: 580 RNLTEKMFESGAIKVLCCTATLAWGVNLPAAVVIVKGTQVYDSKAGGFVDLGISDVIQIF 639
Query: 821 GRAGRRGLDKIGTVVVLC 838
GRAGR +K GT + LC
Sbjct: 640 GRAGRPQYEKFGTGI-LC 656
Score = 158 (60.7 bits), Expect = 6.1e-11, Sum P(4) = 6.1e-11
Identities = 41/119 (34%), Positives = 64/119 (53%)
Query: 730 LKGSDRNLPQI---VRVQSL---LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTET 783
LK SD L I V+ +L L+ G+ +HHAGL+ +++ LF +G +++L +T T
Sbjct: 1376 LKISDDELQDILENVKDDTLRLSLQFGMGLHHAGLVESDRQISHKLFEQGKIQILIATST 1435
Query: 784 FAMGVNAPARTVVFDNLRKFDGR--EFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRD 840
A GVN PA V+ + FD + +R + + QM GRAGR D G +V ++
Sbjct: 1436 LAWGVNLPAHLVIIKGTQFFDAKIEAYRDMDLTDILQMMGRAGRPAYDTSGIAIVYTKE 1494
Score = 110 (43.8 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 36/120 (30%), Positives = 66/120 (55%)
Query: 472 LTGDVSL-RPEA--SCLIMTT----EILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGV 524
LTGD+ L R E + +I+TT +++ ++++ ++ +I DEVH +++ +RG
Sbjct: 351 LTGDMQLTRQEIINTQIIVTTPEKWDVVTRKSTGDSELVAKVKLLIIDEVHLLHE-DRGS 409
Query: 525 VWEEVIIMLPRH-------INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLE 577
V E ++ R I +V LSAT+PN ++ AD++G + + + RPVPL+
Sbjct: 410 VIETLVARTLRQVESTQSMIRVVGLSATLPNYMDVADFLGVNRSVGMFYFDQSFRPVPLQ 469
Score = 109 (43.4 bits), Expect = 6.1e-11, Sum P(4) = 6.1e-11
Identities = 42/148 (28%), Positives = 70/148 (47%)
Query: 399 FELDNFQKEAIYY-LEN-GDSVFVAAHTSAGKTVVAEYAFALATKH--CTRAVYTAPIKT 454
F+ N + +++ L N SVFV + T +GKTVVAE A A ++ VY AP+K
Sbjct: 1111 FKYFNPMQTMVFHSLYNTNSSVFVGSPTGSGKTVVAELAIWHAFNEFPSSKVVYIAPMKA 1170
Query: 455 ISNQKYRDFSGKFDVGL------LTGD----VSLRPEASCLIMTTEILR--SMLYRGADI 502
+ ++ D+ + LTGD + EA +I T E S ++
Sbjct: 1171 LVRERVDDWRERICKNTSHRLVELTGDSLPTIQEVKEADIIITTPEKFDGISRNWQTRKF 1230
Query: 503 IRDIEWVIFDEVHYVNDIERGVVWEEVI 530
++ + VI DE+H + +RG + E ++
Sbjct: 1231 VQQVSLVIMDEIHLLAS-DRGPILEMIV 1257
Score = 87 (35.7 bits), Expect = 8.9e-09, Sum P(4) = 8.9e-09
Identities = 38/139 (27%), Positives = 61/139 (43%)
Query: 472 LTGD----VSLRPEASCLIMTTEILR--SMLYRGADIIRDIEWVIFDEVHYVNDIERGVV 525
LTGD + EA +I T E S ++ ++ + VI DE+H + +RG +
Sbjct: 1194 LTGDSLPTIQEVKEADIIITTPEKFDGISRNWQTRKFVQQVSLVIMDEIHLLAS-DRGPI 1252
Query: 526 WEEVIIML-------PRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEH 578
E ++ + + I ++ +S V N + A W+G K + RPVPL+
Sbjct: 1253 LEMIVSRMNYISSQTKKPIRLLGMSTAVSNAFDMAGWLG-VKNGLFNFPQSV-RPVPLQ- 1309
Query: 579 CLYYSGEFYKVCENEAFIP 597
+Y G EN AF P
Sbjct: 1310 -MYIDG----FPENLAFCP 1323
Score = 84 (34.6 bits), Expect = 6.7e-09, Sum P(4) = 6.7e-09
Identities = 28/105 (26%), Positives = 57/105 (54%)
Query: 445 RAVYTAPIKTISNQKYRDFSGKFD-VGL----LTGDVSL-RPEA--SCLIMTT----EIL 492
+ VY AP+K ++ + +S K +G+ LTGD+ L R E + +I+TT +++
Sbjct: 319 KIVYVAPLKALAAEIVEKYSKKLKWLGINVRELTGDMQLTRQEIINTQIIVTTPEKWDVV 378
Query: 493 RSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHI 537
++++ ++ +I DEVH +++ +RG V E ++ R +
Sbjct: 379 TRKSTGDSELVAKVKLLIIDEVHLLHE-DRGSVIETLVARTLRQV 422
Score = 46 (21.3 bits), Expect = 6.1e-11, Sum P(4) = 6.1e-11
Identities = 19/72 (26%), Positives = 34/72 (47%)
Query: 204 FKQGLDLGELQAYPCLWNVYKDQDQSSLKSTSDEKLNELS-VQFDDLFKKAWEEDVAEFE 262
F G+D ELQ P L N ++ + T ++L+ L + FD+ + +D+
Sbjct: 720 FAYGIDWKELQEDPSLTNRRRE-----MVFTCAKRLHHLQMIIFDENSEAFTPKDLGRIA 774
Query: 263 KDDWL-PNRIKI 273
D +L N ++I
Sbjct: 775 SDFYLLSNSVEI 786
Score = 43 (20.2 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 117 QTKQGKWEPNSVDVSELMLGAQDSGPLPRVAGPAKDFVRGSINSRPFRPGGLEDSQS 173
QT++ + + V + E+ L A D GP+ + +++ S +P R G+ + S
Sbjct: 1226 QTRKFVQQVSLVIMDEIHLLASDRGPILEMIVSRMNYI-SSQTKKPIRLLGMSTAVS 1281
Score = 41 (19.5 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 409 IYYLENGDSVFVAAHTSAGKTVVA 432
+ Y N +++ V A T AGKT VA
Sbjct: 265 VAYNTN-ENMLVCAPTGAGKTDVA 287
Score = 41 (19.5 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 1206 KGRVACEMNSGEELICTECLFENQLDDLE 1234
KG VAC+++ ++L E E D L+
Sbjct: 1891 KGIVACDLDIPDDLFGKELYLECVNDGLD 1919
Score = 41 (19.5 bits), Expect = 1.1e-07, Sum P(5) = 1.1e-07
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 536 HINIVLLSATVPNTVEFADWIGRT 559
++N + TV N E W+G T
Sbjct: 686 NLNAEISLGTVTNVEEAVQWLGYT 709
>UNIPROTKB|E1BH78 [details] [associations]
symbol:LOC100850262 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005682 "U5
snRNP" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0008380 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973
GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR GO:GO:0008026
CTD:23020 EMBL:DAAA02030116 IPI:IPI00695338 RefSeq:NP_001193092.1
UniGene:Bt.7486 ProteinModelPortal:E1BH78 PRIDE:E1BH78
Ensembl:ENSBTAT00000001130 GeneID:510529 KEGG:bta:510529
NextBio:20869492 Uniprot:E1BH78
Length = 2136
Score = 154 (59.3 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 46/154 (29%), Positives = 77/154 (50%)
Query: 688 VVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDK--AFSRLKGSDRNLPQIVRVQS 745
V++F S+ K A + + L EK + +F + A + + ++ + + ++
Sbjct: 721 VLVFVHSRKETGKTARAIRDMCL----EKDTLGLFLREGSASTEVLRTEAEQCKNLELKD 776
Query: 746 LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDG 805
LL G AIHHAG+ + + ++E LF ++VL ST T A GVN PA TV+ + +
Sbjct: 777 LLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSP 836
Query: 806 REFRQLLPG--EYTQMAGRAGRRGLDKIGTVVVL 837
+ R G + QM GRAGR D G +++
Sbjct: 837 EKGRWTELGALDILQMLGRAGRPQYDTKGEGILI 870
Score = 141 (54.7 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 51/157 (32%), Positives = 77/157 (49%)
Query: 397 FPFELDNFQKEAIYYLENGD-SVFVAAHTSAGKTVVAEYAFA--LATKHCTRAVYTAPIK 453
FPF + Q + + N D +VFV A T +GKT+ AE+A L R VY P++
Sbjct: 1325 FPF-FNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQNSEGRCVYITPME 1383
Query: 454 TISNQKYRDFSGKFD------VGLLTG----DVSLRPEASCLIMTTEI--LRSMLYRGAD 501
++ Q Y D+ KF V LLTG D+ L + S ++ T E + S ++
Sbjct: 1384 ALAEQVYMDWYEKFQDRLSKKVVLLTGETSTDLKLLGKGSVIVSTPEKWDILSRRWKQRK 1443
Query: 502 IIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHIN 538
+++I + DEVH + E G V E VI R+I+
Sbjct: 1444 NVQNINLFVVDEVHLIGG-ENGPVLE-VICSRMRYIS 1478
Score = 119 (46.9 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 26/99 (26%), Positives = 51/99 (51%)
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK 802
++ L G+ H GL P+ + ++E LF G ++V+ ++ + G+N A V+ + +
Sbjct: 1609 LKETLLNGVGYLHEGLSPLERRLVEQLFSSGAIQVVVASRSLCWGLNVAAHLVIIMDTQY 1668
Query: 803 FDGREFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCR 839
++G+ + P + QM G A R D G V++C+
Sbjct: 1669 YNGKTHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQ 1707
Score = 101 (40.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 458 QKYRDFSGKFDVGLLTG----DVSLRPEASCLIMTTEI--LRSMLYRGADIIRDIEWVIF 511
+K++D K V LLTG D+ L + S ++ T E + S ++ +++I +
Sbjct: 1395 EKFQDRLSK-KVVLLTGETSTDLKLLGKGSVIVSTPEKWDILSRRWKQRKNVQNINLFVV 1453
Query: 512 DEVHYVNDIERGVVWEEVII-------MLPRHINIVLLSATVPNTVEFADWIGRTKQKKI 564
DEVH + E G V E + + R I IV LS+++ N + A W+G +
Sbjct: 1454 DEVHLIGG-ENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTF 1512
Query: 565 RVTGTTKRPVPLE 577
RPVPLE
Sbjct: 1513 NFHPNV-RPVPLE 1524
Score = 94 (38.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 469 VGLLTGDVSL-RPEASC---LIMTTEILRSMLYRGAD--IIRDIEWVIFDEVHYVNDIER 522
V LTGD L + E S ++ T E + +G + + + VI DE+H ++D +R
Sbjct: 566 VAELTGDHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLVILDEIHLLHD-DR 624
Query: 523 GVVWEEVIIMLPRHIN-------IVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVP 575
G V E ++ R+I ++ LSAT+PN + A ++ K + + RPVP
Sbjct: 625 GPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVP 684
Query: 576 LE 577
LE
Sbjct: 685 LE 686
Score = 37 (18.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 452 IKTISNQKYRDFSGKFDVGLLTG 474
+ + N+K RD + ++ LL G
Sbjct: 140 LAVLKNEKLRDKERRKEIDLLLG 162
>DICTYBASE|DDB_G0270042 [details] [associations]
symbol:ascc3l "U5 small nuclear ribonucleoprotein 200
kDa helicase" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 dictyBase:DDB_G0270042 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 KO:K12854 OMA:KWDVLSR GO:GO:0008026
RefSeq:XP_646493.1 ProteinModelPortal:Q55CI8 STRING:Q55CI8
EnsemblProtists:DDB0233131 GeneID:8617455 KEGG:ddi:DDB_G0270042
InParanoid:Q55CI8 ProtClustDB:CLSZ2431432 Uniprot:Q55CI8
Length = 2237
Score = 177 (67.4 bits), Expect = 2.5e-11, Sum P(4) = 2.5e-11
Identities = 60/181 (33%), Positives = 89/181 (49%)
Query: 688 VVIFCFSKNHCDKLADGMSGIDLTSSS-EKSEI-RVFCDKAFSR--LKGSDRNLPQIVRV 743
++IF S+ K +G DL + E I R D A SR L+ + Q +
Sbjct: 791 ILIFVHSRRETAK-----TGKDLRDRAVEDQSIDRYIRDPA-SREILRATASKQIQNAEL 844
Query: 744 QSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKF 803
+ LL GI IHHAGL + ++E LF ++VL ST T A GVN PA TV+ + +
Sbjct: 845 KDLLPYGIGIHHAGLSRSDRSLVEDLFGDNRIQVLISTATLAWGVNLPAHTVIIKGTQIY 904
Query: 804 DGRE-FRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQ 862
+ + + +L P + TQM GRAGR DK G +++ E ++ + +ESQ
Sbjct: 905 NPEKGWCELSPLDVTQMLGRAGRPPFDKEGEGIIITSQH---ELQFYLSLLNTQLSIESQ 961
Query: 863 F 863
F
Sbjct: 962 F 962
Score = 122 (48.0 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 33/100 (33%), Positives = 58/100 (58%)
Query: 747 LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGV-NAPARTVVFDNLRKFDG 805
L+ G+A +H GL + V+E+LF G ++VL +T + A + N A+ VV + + G
Sbjct: 1686 LQMGVAFYHDGLTERERRVVEILFRSGSIRVLIATHSVAWLLDNVFAQLVVIMGTQLYQG 1745
Query: 806 REFRQL-LP-GEYTQMAGRAGRR---GL--DKIGTVVVLC 838
++ R + P + QM GRAG++ G+ +K+ V++LC
Sbjct: 1746 KDIRYIDYPINDILQMIGRAGKQEGGGVISNKVAKVLLLC 1785
Score = 122 (48.0 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 40/142 (28%), Positives = 74/142 (52%)
Query: 413 ENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRA--VYTAPIKTISNQKYRDFSGKFDV- 469
++ D+ F++A T++GKTV AE A K +A VY AP++ +++ + +D+S KF V
Sbjct: 1411 QSNDNAFISAPTNSGKTVCAEIALIRCFKQNPKAKVVYLAPMQDLASVRLKDWSNKFGVK 1470
Query: 470 ---GL----LTGDV----SLRPEASCLIMTTEI--LRSMLYRGADIIRDIEWVIFDEVHY 516
GL LTGD + ++ ++ E + S ++ ++ I +I DE+H
Sbjct: 1471 SPFGLVVSDLTGDAVTDNKILDRSNIIVTNCEKWDILSRKWKQRKALQSINLLIVDELHL 1530
Query: 517 VNDIERGVVWEEVIIMLPRHIN 538
+ E G E +++ R+I+
Sbjct: 1531 IGG-EYGPTME-IVVSRMRYIS 1550
Score = 97 (39.2 bits), Expect = 2.5e-11, Sum P(4) = 2.5e-11
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 469 VGLLTGDVSLR----PEASCLIMTTEILRSMLYRGAD--IIRDIEWVIFDEVHYVNDIER 522
V LTGD SL E ++ T E + + D + ++ +I DE+H ++D ER
Sbjct: 638 VNELTGDQSLTNKQISETQIIVTTPEKWDIITRKSGDRAYTQLVKLIIIDEIHLLHD-ER 696
Query: 523 GVVWEEVIIMLPRHIN-------IVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVP 575
G V E ++ R I +V LSAT+PN + A ++ R + + ++ RP+P
Sbjct: 697 GPVLECIVARTLRMIESTQQMVRLVGLSATLPNYEDVATFL-RVEPDGVFYFDSSYRPIP 755
Query: 576 LE 577
LE
Sbjct: 756 LE 757
Score = 75 (31.5 bits), Expect = 0.00030, Sum P(4) = 0.00030
Identities = 25/97 (25%), Positives = 47/97 (48%)
Query: 490 EILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHIN--------IVL 541
+IL S ++ ++ I +I DE+H + E G E +++ R+I+ ++
Sbjct: 1505 DIL-SRKWKQRKALQSINLLIVDELHLIGG-EYGPTME-IVVSRMRYISTQTGNALRVIA 1561
Query: 542 LSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEH 578
LS+++ N + WIG T Q RP+P+E+
Sbjct: 1562 LSSSIANARDLVLWIGATPQTCYNFHPNV-RPIPVEY 1597
Score = 48 (22.0 bits), Expect = 2.5e-11, Sum P(4) = 2.5e-11
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 221 NVYKDQDQSSLKSTSDEKLNELSVQFDDLFKKAW-EEDVAEFEKDDWLPNRI 271
N K Q + K+T D+K N + + W + ++EFE+D L ++
Sbjct: 307 NNNKSQKPDT-KNTKDDKNNNSKLISPNEIDSFWIQRKISEFERDHDLSKQL 357
Score = 44 (20.5 bits), Expect = 0.00030, Sum P(4) = 0.00030
Identities = 21/94 (22%), Positives = 37/94 (39%)
Query: 399 FELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIK---TI 455
FE + +K+ + NG+ V+ + + +Y + + H A Y+ PI I
Sbjct: 1305 FEYFSLKKKMV----NGEDQLVSFTVPLSQPLPPQYYVRVISDHWIGAEYSLPISFQHLI 1360
Query: 456 SNQKYRDFSGKFDVGLLTGDVSLRPEASCLIMTT 489
+KY D+ L V P+A + T
Sbjct: 1361 LPEKYPPCRPLLDLQPLPIQVLKDPKAESIFKPT 1394
Score = 38 (18.4 bits), Expect = 2.5e-11, Sum P(4) = 2.5e-11
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 416 DSVFVAAHTSAGKTVVA 432
+++ ++A TS+GKT VA
Sbjct: 568 NNLLLSAPTSSGKTNVA 584
>MGI|MGI:2176740 [details] [associations]
symbol:Helq "helicase, POLQ-like" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006259 "DNA metabolic process" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017116 "single-stranded
DNA-dependent ATP-dependent DNA helicase activity" evidence=ISO]
[GO:0017117 "single-stranded DNA-dependent ATP-dependent DNA
helicase complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR010995 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2176740 GO:GO:0005524
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1204 GeneTree:ENSGT00640000091272
SUPFAM:SSF47794 GO:GO:0017116 CTD:113510 OMA:SRPLENC
OrthoDB:EOG4THVSJ EMBL:BC082601 EMBL:BC109169 EMBL:BC109170
EMBL:AK052427 EMBL:AF436846 IPI:IPI00226287 IPI:IPI00886160
IPI:IPI00890018 RefSeq:NP_001074576.1 UniGene:Mm.21469
ProteinModelPortal:Q2VPA6 SMR:Q2VPA6 STRING:Q2VPA6
PhosphoSite:Q2VPA6 PRIDE:Q2VPA6 Ensembl:ENSMUST00000044684
GeneID:191578 KEGG:mmu:191578 UCSC:uc008yhz.1 UCSC:uc012dzs.1
HOGENOM:HOG000110747 InParanoid:Q2VPA6 NextBio:371088 Bgee:Q2VPA6
Genevestigator:Q2VPA6 GO:GO:0017117 Uniprot:Q2VPA6
Length = 1069
Score = 180 (68.4 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 67/240 (27%), Positives = 117/240 (48%)
Query: 689 VIFCFSKNHCDKLADGMSGI---DLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQS 745
++FC SK +C+ +A+ + D + EK + V K+ + G+ + P + R
Sbjct: 540 LVFCPSKKNCENVAEMLCKFLSKDYLNHREKEKCEVI--KSLRNI-GNGKVCPVLKRTVP 596
Query: 746 LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK-FD 804
GIA HH+GL ++++E + GV+ +L T T A GVN PAR V+ LR +
Sbjct: 597 F---GIAYHHSGLTSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVI---LRAPYV 650
Query: 805 GREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGS----ATRLE 860
F L +Y QM GRAGR G+D G ++L +++ + + +I G + L
Sbjct: 651 ANTF--LKRNQYKQMVGRAGRAGIDTAGESILLLQEK--DKQQVLELISGPLETCCSHLV 706
Query: 861 SQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKTIECIK 920
+F I L L + LK+ L + +F S QQ++L+++ + T++ ++
Sbjct: 707 EEFTKG-IQALFLSLIG-LKIAASLGDIY-QFMSGTFFGVQQKILLKEKSLWEITVDALE 763
Score = 70 (29.7 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 42/184 (22%), Positives = 73/184 (39%)
Query: 424 TSAGKTVVAEYAFALATKHCTR--AVYTAPIKTISNQKYRDFSG-KFDVGLLTGD----- 475
TS GKT+VAE L C + + P I +K S ++G +
Sbjct: 320 TSGGKTLVAEILM-LQELLCRQKDVLMILPYVAIVQEKISSLSSFGIELGFFVEEYAGSK 378
Query: 476 -----VSLRPEASCLIMTTEILRSMLYRGADIIR--DIEWVIFDEVHYVNDIERGVVWEE 528
+ R + S I T E S++ + R + V+ DE+H + + RG + E
Sbjct: 379 GRFPPIKRREKKSLYIATIEKAHSLVNALIETSRLSTLGLVVVDELHMIGEGSRGAILEM 438
Query: 529 V---IIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGE 585
++ + I+ +SAT+ N + ++ K + RPV L+ L +
Sbjct: 439 TLAKVLYTSKTTQIIGMSATLNNVEDLQAFL------KAEYYTSQFRPVELKEFLKVNDT 492
Query: 586 FYKV 589
Y+V
Sbjct: 493 IYEV 496
>GENEDB_PFALCIPARUM|PFD1060w [details] [associations]
symbol:PFD1060w "u5 small nuclear
ribonucleoprotein-specific protein, putative" species:5833
"Plasmodium falciparum" [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005681
GO:GO:0003676 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 HOGENOM:HOG000157749 GO:GO:0004004 KO:K01509
RefSeq:XP_001351528.1 ProteinModelPortal:Q8IFP1 IntAct:Q8IFP1
MINT:MINT-1569750 PRIDE:Q8IFP1 EnsemblProtists:PFD1060w:mRNA
GeneID:812456 KEGG:pfa:PFD1060w EuPathDB:PlasmoDB:PF3D7_0422500
ProtClustDB:CLSZ2515128 Uniprot:Q8IFP1
Length = 2874
Score = 163 (62.4 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 75/311 (24%), Positives = 138/311 (44%)
Query: 638 EHPNRGKQNKHSVVGIKNSGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNH 697
+H R Q + +GIK G + + L +E++ + ++ + K +L IF S+
Sbjct: 998 DHSFRPVQIEQHYIGIKEKKGIKK-YALM-NELT-YEKVLEEAGKNQIL---IFVHSRKE 1051
Query: 698 CDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAG 757
+ + + ID S+ + K S + S++ ++ +L G IHHAG
Sbjct: 1052 TYRTSKLL--IDRFMKSDNLSKFLIDKKISSEILLSEKEHVINEELKEILPFGFGIHHAG 1109
Query: 758 LLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGR--EFRQLLPGE 815
L + ++++E LF ++VL T T A G+N PA TV+ ++ +F +L +
Sbjct: 1110 LKRLDRKLVEDLFSDRHIQVLVCTSTLAWGINLPAHTVIIKGTSVYNINIGDFDELSSMD 1169
Query: 816 YTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLLR 875
QM GR+GR DK G +++ +D K++ + + E F + +LH +
Sbjct: 1170 VLQMVGRSGRPQYDKSGKAIII--------TDHKNLQLYLSLNNEQLFIES--TLLHNI- 1218
Query: 876 VEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPP------KTIECIKGEPAIEEYY 929
V + E +LK + E + +R L P + + IKG ++
Sbjct: 1219 VNIINAEIVLK-NIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEEFKDII 1277
Query: 930 DMYYEAEKYNN 940
DM + +K+NN
Sbjct: 1278 DMNNKTKKHNN 1288
Score = 107 (42.7 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 30/105 (28%), Positives = 58/105 (55%)
Query: 445 RAVYTAPIKTISNQKYRDFSGKFD-----VGLLTGDVSLRP----EASCLIMTTEILR-- 493
+ VY +P+K + N++ + F+ + V LTGDV+L ++ ++MT E
Sbjct: 772 KIVYISPMKALVNEQVQSFNLRLKCMNIKVSELTGDVNLSTKELDDSQIIVMTPEKFDVI 831
Query: 494 SMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHIN 538
S + ++ I+ +IFDE+H +N++ RG V E +I + R+++
Sbjct: 832 SRKWNEKILLHKIKLIIFDEIHLLNEM-RGNVLESIIARINRYMD 875
Score = 74 (31.1 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 19/89 (21%), Positives = 41/89 (46%)
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVF-DNL- 800
++ +++GI H + I K+++E+LF + +++L + + +N A V+ D +
Sbjct: 2299 LRQFMKKGICYLHNNMTEIEKKIVEILFDKKTIQILIVSYDYIYSLNVYANNVIILDTII 2358
Query: 801 RKFDGREFRQLLPGEYTQMAGRAGRRGLD 829
F + +M AGR+ D
Sbjct: 2359 THFHNNKEEDYSIQNILEMISYAGRQNED 2387
Score = 60 (26.2 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 18/77 (23%), Positives = 35/77 (45%)
Query: 539 IVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLE---HCLYYSGEFYKVCENEAF 595
+ L S ++ N+ +FA+WIG K T R +P+E H + + + +
Sbjct: 2025 LCLSSCSLYNSKDFAEWIGCKKNDYYNFLSTV-RDIPIEIYLHAVNIMNKQNRYISMQRQ 2083
Query: 596 IPQGWKAAKDAYKRKNL 612
+ Q + K+ K+K +
Sbjct: 2084 VYQNIRKLKNIPKKKKM 2100
Score = 56 (24.8 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 517 VNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
VN + + E I + + I +V LSAT+PN + ++ ++ I + RPV +
Sbjct: 947 VNSVRQNKYGENHISIRRKKIRLVGLSATLPNYEDVGIFLRAHIERGIFYFDHSFRPVQI 1006
Query: 577 EHCLYYSG 584
E +Y G
Sbjct: 1007 EQ--HYIG 1012
Score = 56 (24.8 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 416 DSVFVAAHTSAGKTVVAEY-------AFALATKHCTRA----VYTAPIKTISNQKYRDFS 464
+++ + A T +GKT +A ++ L + + R VY +P+K + N++ + F+
Sbjct: 732 ENMLICAPTGSGKTNIALLCILNVINSYRLTSGNINRKDFKIVYISPMKALVNEQVQSFN 791
Query: 465 GKFD-----VGLLTGDVSL 478
+ V LTGDV+L
Sbjct: 792 LRLKCMNIKVSELTGDVNL 810
Score = 42 (19.8 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 1122 MNLVEAYYKWAGLLRKMAA---NKCHGCIKLEEHMKLTKENKR 1161
M++++ YK+ + K+ N + C + E L K NK+
Sbjct: 1331 MSILKTNYKYNKFMEKIKRRMYNILYSCFLILEKYDLIKYNKK 1373
Score = 41 (19.5 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 11/57 (19%), Positives = 27/57 (47%)
Query: 230 SLKSTSDEKLNELSVQFDDLFKKAWEEDVAEFEKDDWLPNRIKIMLYWRLHPFGNMQ 286
S K D ++ ++ + D+ + W E + L ++IK++++ +H M+
Sbjct: 811 STKELDDSQIIVMTPEKFDVISRKWNEKI--------LLHKIKLIIFDEIHLLNEMR 859
>UNIPROTKB|Q8IFP1 [details] [associations]
symbol:PFD1060w "U5 small nuclear
ribonucleoprotein-specific protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005681
GO:GO:0003676 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 HOGENOM:HOG000157749 GO:GO:0004004 KO:K01509
RefSeq:XP_001351528.1 ProteinModelPortal:Q8IFP1 IntAct:Q8IFP1
MINT:MINT-1569750 PRIDE:Q8IFP1 EnsemblProtists:PFD1060w:mRNA
GeneID:812456 KEGG:pfa:PFD1060w EuPathDB:PlasmoDB:PF3D7_0422500
ProtClustDB:CLSZ2515128 Uniprot:Q8IFP1
Length = 2874
Score = 163 (62.4 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 75/311 (24%), Positives = 138/311 (44%)
Query: 638 EHPNRGKQNKHSVVGIKNSGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNH 697
+H R Q + +GIK G + + L +E++ + ++ + K +L IF S+
Sbjct: 998 DHSFRPVQIEQHYIGIKEKKGIKK-YALM-NELT-YEKVLEEAGKNQIL---IFVHSRKE 1051
Query: 698 CDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAG 757
+ + + ID S+ + K S + S++ ++ +L G IHHAG
Sbjct: 1052 TYRTSKLL--IDRFMKSDNLSKFLIDKKISSEILLSEKEHVINEELKEILPFGFGIHHAG 1109
Query: 758 LLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGR--EFRQLLPGE 815
L + ++++E LF ++VL T T A G+N PA TV+ ++ +F +L +
Sbjct: 1110 LKRLDRKLVEDLFSDRHIQVLVCTSTLAWGINLPAHTVIIKGTSVYNINIGDFDELSSMD 1169
Query: 816 YTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLLR 875
QM GR+GR DK G +++ +D K++ + + E F + +LH +
Sbjct: 1170 VLQMVGRSGRPQYDKSGKAIII--------TDHKNLQLYLSLNNEQLFIES--TLLHNI- 1218
Query: 876 VEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPP------KTIECIKGEPAIEEYY 929
V + E +LK + E + +R L P + + IKG ++
Sbjct: 1219 VNIINAEIVLK-NIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEEFKDII 1277
Query: 930 DMYYEAEKYNN 940
DM + +K+NN
Sbjct: 1278 DMNNKTKKHNN 1288
Score = 107 (42.7 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 30/105 (28%), Positives = 58/105 (55%)
Query: 445 RAVYTAPIKTISNQKYRDFSGKFD-----VGLLTGDVSLRP----EASCLIMTTEILR-- 493
+ VY +P+K + N++ + F+ + V LTGDV+L ++ ++MT E
Sbjct: 772 KIVYISPMKALVNEQVQSFNLRLKCMNIKVSELTGDVNLSTKELDDSQIIVMTPEKFDVI 831
Query: 494 SMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHIN 538
S + ++ I+ +IFDE+H +N++ RG V E +I + R+++
Sbjct: 832 SRKWNEKILLHKIKLIIFDEIHLLNEM-RGNVLESIIARINRYMD 875
Score = 74 (31.1 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 19/89 (21%), Positives = 41/89 (46%)
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVF-DNL- 800
++ +++GI H + I K+++E+LF + +++L + + +N A V+ D +
Sbjct: 2299 LRQFMKKGICYLHNNMTEIEKKIVEILFDKKTIQILIVSYDYIYSLNVYANNVIILDTII 2358
Query: 801 RKFDGREFRQLLPGEYTQMAGRAGRRGLD 829
F + +M AGR+ D
Sbjct: 2359 THFHNNKEEDYSIQNILEMISYAGRQNED 2387
Score = 60 (26.2 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 18/77 (23%), Positives = 35/77 (45%)
Query: 539 IVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLE---HCLYYSGEFYKVCENEAF 595
+ L S ++ N+ +FA+WIG K T R +P+E H + + + +
Sbjct: 2025 LCLSSCSLYNSKDFAEWIGCKKNDYYNFLSTV-RDIPIEIYLHAVNIMNKQNRYISMQRQ 2083
Query: 596 IPQGWKAAKDAYKRKNL 612
+ Q + K+ K+K +
Sbjct: 2084 VYQNIRKLKNIPKKKKM 2100
Score = 56 (24.8 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 517 VNDIERGVVWEEVIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
VN + + E I + + I +V LSAT+PN + ++ ++ I + RPV +
Sbjct: 947 VNSVRQNKYGENHISIRRKKIRLVGLSATLPNYEDVGIFLRAHIERGIFYFDHSFRPVQI 1006
Query: 577 EHCLYYSG 584
E +Y G
Sbjct: 1007 EQ--HYIG 1012
Score = 56 (24.8 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 416 DSVFVAAHTSAGKTVVAEY-------AFALATKHCTRA----VYTAPIKTISNQKYRDFS 464
+++ + A T +GKT +A ++ L + + R VY +P+K + N++ + F+
Sbjct: 732 ENMLICAPTGSGKTNIALLCILNVINSYRLTSGNINRKDFKIVYISPMKALVNEQVQSFN 791
Query: 465 GKFD-----VGLLTGDVSL 478
+ V LTGDV+L
Sbjct: 792 LRLKCMNIKVSELTGDVNL 810
Score = 42 (19.8 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 1122 MNLVEAYYKWAGLLRKMAA---NKCHGCIKLEEHMKLTKENKR 1161
M++++ YK+ + K+ N + C + E L K NK+
Sbjct: 1331 MSILKTNYKYNKFMEKIKRRMYNILYSCFLILEKYDLIKYNKK 1373
Score = 41 (19.5 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 11/57 (19%), Positives = 27/57 (47%)
Query: 230 SLKSTSDEKLNELSVQFDDLFKKAWEEDVAEFEKDDWLPNRIKIMLYWRLHPFGNMQ 286
S K D ++ ++ + D+ + W E + L ++IK++++ +H M+
Sbjct: 811 STKELDDSQIIVMTPEKFDVISRKWNEKI--------LLHKIKLIIFDEIHLLNEMR 859
>UNIPROTKB|O75643 [details] [associations]
symbol:SNRNP200 "U5 small nuclear ribonucleoprotein 200 kDa
helicase" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA;TAS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000354 "cis assembly of pre-catalytic
spliceosome" evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IDA] [GO:0005682 "U5 snRNP" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0005654 Reactome:REACT_1675 GO:GO:0005682 GO:GO:0003676
Orphanet:791 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOVERGEN:HBG051896 KO:K12854
OMA:KWDVLSR GO:GO:0008026 GO:GO:0000354 EMBL:AY572488 EMBL:AK024391
EMBL:AK090671 EMBL:AB018331 EMBL:Z70200 EMBL:BC065924 EMBL:BC007577
IPI:IPI00168235 IPI:IPI00420014 RefSeq:NP_054733.2
UniGene:Hs.246112 PDB:2Q0Z PDB:4F91 PDB:4F92 PDB:4F93 PDBsum:2Q0Z
PDBsum:4F91 PDBsum:4F92 PDBsum:4F93 ProteinModelPortal:O75643
SMR:O75643 IntAct:O75643 MINT:MINT-5003904 STRING:O75643
PhosphoSite:O75643 PaxDb:O75643 PeptideAtlas:O75643 PRIDE:O75643
Ensembl:ENST00000323853 GeneID:23020 KEGG:hsa:23020 UCSC:uc002svu.3
CTD:23020 GeneCards:GC02M096940 H-InvDB:HIX0002273 HGNC:HGNC:30859
HPA:HPA029321 MIM:601664 MIM:610359 neXtProt:NX_O75643
PharmGKB:PA164726004 InParanoid:O75643 OrthoDB:EOG4WM4SS
PhylomeDB:O75643 ChiTaRS:SNRNP200 EvolutionaryTrace:O75643
GenomeRNAi:23020 NextBio:43966 ArrayExpress:O75643 Bgee:O75643
CleanEx:HS_SNRNP200 Genevestigator:O75643
GermOnline:ENSG00000144028 Uniprot:O75643
Length = 2136
Score = 154 (59.3 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 46/154 (29%), Positives = 77/154 (50%)
Query: 688 VVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDK--AFSRLKGSDRNLPQIVRVQS 745
V++F S+ K A + + L EK + +F + A + + ++ + + ++
Sbjct: 721 VLVFVHSRKETGKTARAIRDMCL----EKDTLGLFLREGSASTEVLRTEAEQCKNLELKD 776
Query: 746 LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDG 805
LL G AIHHAG+ + + ++E LF ++VL ST T A GVN PA TV+ + +
Sbjct: 777 LLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSP 836
Query: 806 REFRQLLPG--EYTQMAGRAGRRGLDKIGTVVVL 837
+ R G + QM GRAGR D G +++
Sbjct: 837 EKGRWTELGALDILQMLGRAGRPQYDTKGEGILI 870
Score = 139 (54.0 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 51/157 (32%), Positives = 77/157 (49%)
Query: 397 FPFELDNFQKEAIYYLENGD-SVFVAAHTSAGKTVVAEYAFA--LATKHCTRAVYTAPIK 453
FPF + Q + + N D +VFV A T +GKT+ AE+A L R VY P++
Sbjct: 1325 FPF-FNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQSSEGRCVYITPME 1383
Query: 454 TISNQKYRDFSGKFD------VGLLTG----DVSLRPEASCLIMTTEI--LRSMLYRGAD 501
++ Q Y D+ KF V LLTG D+ L + + +I T E + S ++
Sbjct: 1384 ALAEQVYMDWYEKFQDRLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWKQRK 1443
Query: 502 IIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHIN 538
+++I + DEVH + E G V E VI R+I+
Sbjct: 1444 NVQNINLFVVDEVHLIGG-ENGPVLE-VICSRMRYIS 1478
Score = 116 (45.9 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 26/99 (26%), Positives = 51/99 (51%)
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK 802
++ L G+ H GL P+ + ++E LF G ++V+ ++ + G+N A V+ + +
Sbjct: 1609 LKETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQY 1668
Query: 803 FDGREFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCR 839
++G+ + P + QM G A R D G V++C+
Sbjct: 1669 YNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQ 1707
Score = 99 (39.9 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 458 QKYRDFSGKFDVGLLTG----DVSLRPEASCLIMTTEI--LRSMLYRGADIIRDIEWVIF 511
+K++D K V LLTG D+ L + + +I T E + S ++ +++I +
Sbjct: 1395 EKFQDRLNK-KVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLFVV 1453
Query: 512 DEVHYVNDIERGVVWEEVII-------MLPRHINIVLLSATVPNTVEFADWIGRTKQKKI 564
DEVH + E G V E + + R I IV LS+++ N + A W+G +
Sbjct: 1454 DEVHLIGG-ENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTF 1512
Query: 565 RVTGTTKRPVPLE 577
RPVPLE
Sbjct: 1513 NFHPNV-RPVPLE 1524
Score = 93 (37.8 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 469 VGLLTGDVSL-RPEASC---LIMTTEILRSMLYRGAD--IIRDIEWVIFDEVHYVNDIER 522
V LTGD L + E S ++ T E + +G + + + +I DE+H ++D +R
Sbjct: 566 VAELTGDHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLIILDEIHLLHD-DR 624
Query: 523 GVVWEEVIIMLPRHIN-------IVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVP 575
G V E ++ R+I ++ LSAT+PN + A ++ K + + RPVP
Sbjct: 625 GPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVP 684
Query: 576 LE 577
LE
Sbjct: 685 LE 686
Score = 37 (18.1 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 452 IKTISNQKYRDFSGKFDVGLLTG 474
+ + N+K RD + ++ LL G
Sbjct: 140 LAVLKNEKLRDKERRKEIDLLLG 162
>UNIPROTKB|F1LNJ2 [details] [associations]
symbol:Ascc3l1 "Protein Ascc3l1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0008380 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973
GeneTree:ENSGT00640000091272 OMA:KWDVLSR GO:GO:0008026
IPI:IPI00562876 PRIDE:F1LNJ2 Ensembl:ENSRNOT00000043895
ArrayExpress:F1LNJ2 Uniprot:F1LNJ2
Length = 2139
Score = 154 (59.3 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 46/154 (29%), Positives = 77/154 (50%)
Query: 688 VVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDK--AFSRLKGSDRNLPQIVRVQS 745
V++F S+ K A + + L EK + +F + A + + ++ + + ++
Sbjct: 721 VLVFVHSRKETGKTARAIRDMCL----EKDTLGLFLREGSASTEVLRTEAEQCKNLELKD 776
Query: 746 LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDG 805
LL G AIHHAG+ + + ++E LF ++VL ST T A GVN PA TV+ + +
Sbjct: 777 LLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSP 836
Query: 806 REFRQLLPG--EYTQMAGRAGRRGLDKIGTVVVL 837
+ R G + QM GRAGR D G +++
Sbjct: 837 EKGRWTELGALDILQMLGRAGRPQYDTKGEGILI 870
Score = 139 (54.0 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 51/157 (32%), Positives = 77/157 (49%)
Query: 397 FPFELDNFQKEAIYYLENGD-SVFVAAHTSAGKTVVAEYAFA--LATKHCTRAVYTAPIK 453
FPF + Q + + N D +VFV A T +GKT+ AE+A L R VY P++
Sbjct: 1328 FPF-FNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQNSEGRCVYITPME 1386
Query: 454 TISNQKYRDFSGKFD------VGLLTG----DVSLRPEASCLIMTTEI--LRSMLYRGAD 501
++ Q Y D+ KF V LLTG D+ L + + +I T E + S ++
Sbjct: 1387 ALAEQVYMDWYEKFQDRLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWKQRK 1446
Query: 502 IIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHIN 538
+++I + DEVH + E G V E VI R+I+
Sbjct: 1447 NVQNINLFVVDEVHLIGG-ENGPVLE-VICSRMRYIS 1481
Score = 116 (45.9 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 26/99 (26%), Positives = 51/99 (51%)
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK 802
++ L G+ H GL P+ + ++E LF G ++V+ ++ + G+N A V+ + +
Sbjct: 1612 LKETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQY 1671
Query: 803 FDGREFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCR 839
++G+ + P + QM G A R D G V++C+
Sbjct: 1672 YNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQ 1710
Score = 99 (39.9 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 458 QKYRDFSGKFDVGLLTG----DVSLRPEASCLIMTTEI--LRSMLYRGADIIRDIEWVIF 511
+K++D K V LLTG D+ L + + +I T E + S ++ +++I +
Sbjct: 1398 EKFQDRLNK-KVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLFVV 1456
Query: 512 DEVHYVNDIERGVVWEEVII-------MLPRHINIVLLSATVPNTVEFADWIGRTKQKKI 564
DEVH + E G V E + + R I IV LS+++ N + A W+G +
Sbjct: 1457 DEVHLIGG-ENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTF 1515
Query: 565 RVTGTTKRPVPLE 577
RPVPLE
Sbjct: 1516 NFHPNV-RPVPLE 1527
Score = 92 (37.4 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 469 VGLLTGDVSL-RPEASC---LIMTTEILRSMLYRGAD--IIRDIEWVIFDEVHYVNDIER 522
V LTGD L + E S ++ T E + +G + + + ++ DE+H ++D +R
Sbjct: 566 VAELTGDHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLIVLDEIHLLHD-DR 624
Query: 523 GVVWEEVIIMLPRHIN-------IVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVP 575
G V E ++ R+I ++ LSAT+PN + A ++ K + + RPVP
Sbjct: 625 GPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVP 684
Query: 576 LE 577
LE
Sbjct: 685 LE 686
Score = 37 (18.1 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 452 IKTISNQKYRDFSGKFDVGLLTG 474
+ + N+K RD + ++ LL G
Sbjct: 140 LAVLKNEKLRDKERRREIDLLLG 162
>UNIPROTKB|J9P160 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 CTD:113510 EMBL:AAEX03016730 RefSeq:XP_544959.2
Ensembl:ENSCAFT00000044378 GeneID:487837 KEGG:cfa:487837
Uniprot:J9P160
Length = 1072
Score = 171 (65.3 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 49/155 (31%), Positives = 83/155 (53%)
Query: 689 VIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKG-SDRNLPQIVRVQSLL 747
++FC +K +C+ +A+ + L+ K + + LK S NL I++ +
Sbjct: 553 LVFCPTKKNCENVAEMICRF-LSKQYLKHREKEK-HEVIKNLKNISSGNLCPILK--RTI 608
Query: 748 RRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK-FDGR 806
G+A HH+GL ++++E + GV+ + T T A GVN PAR V+ LR + +
Sbjct: 609 PFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVI---LRAPYVAK 665
Query: 807 EFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDE 841
EF L +Y QM GRAGR G+D IG +++ +++
Sbjct: 666 EF--LKRNQYKQMIGRAGRAGIDSIGESILILQEK 698
Score = 74 (31.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 424 TSAGKTVVAEYAFALATKHCTR--AVYTAPIKTISNQKYRDFSG-KFDVGLLTGD----- 475
TS GKT+VAE L C R + P I +K S ++G +
Sbjct: 333 TSGGKTLVAEILM-LQELLCRRRDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSK 391
Query: 476 -----VSLRPEASCLIMTTE----ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVW 526
+ R + S I T E ++ S++ G I + V+ DE+H + + RG +
Sbjct: 392 GKFPPIKRRGKKSLYIATIEKGNSLVNSLIETGR--ISSLGLVVVDELHMIGEGSRGAIL 449
Query: 527 EEV---IIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTK--RPVPLEHCLY 581
E ++ + I+ +SAT+ N + QK ++ T RPV L+ L
Sbjct: 450 EMTLAKVLYTSKTTQIIGMSATLTNVEDL--------QKFLQAEYYTSQFRPVELKEYLK 501
Query: 582 YSGEFYKV 589
+ Y+V
Sbjct: 502 INDAIYEV 509
>UNIPROTKB|E2RST3 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 OMA:SRPLENC EMBL:AAEX03016730
Ensembl:ENSCAFT00000014486 Uniprot:E2RST3
Length = 1106
Score = 171 (65.3 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 49/155 (31%), Positives = 83/155 (53%)
Query: 689 VIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKG-SDRNLPQIVRVQSLL 747
++FC +K +C+ +A+ + L+ K + + LK S NL I++ +
Sbjct: 587 LVFCPTKKNCENVAEMICRF-LSKQYLKHREKEK-HEVIKNLKNISSGNLCPILK--RTI 642
Query: 748 RRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK-FDGR 806
G+A HH+GL ++++E + GV+ + T T A GVN PAR V+ LR + +
Sbjct: 643 PFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVI---LRAPYVAK 699
Query: 807 EFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDE 841
EF L +Y QM GRAGR G+D IG +++ +++
Sbjct: 700 EF--LKRNQYKQMIGRAGRAGIDSIGESILILQEK 732
Score = 74 (31.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 46/188 (24%), Positives = 76/188 (40%)
Query: 424 TSAGKTVVAEYAFALATKHCTR--AVYTAPIKTISNQKYRDFSG-KFDVGLLTGD----- 475
TS GKT+VAE L C R + P I +K S ++G +
Sbjct: 367 TSGGKTLVAEILM-LQELLCRRRDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSK 425
Query: 476 -----VSLRPEASCLIMTTE----ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVW 526
+ R + S I T E ++ S++ G I + V+ DE+H + + RG +
Sbjct: 426 GKFPPIKRRGKKSLYIATIEKGNSLVNSLIETGR--ISSLGLVVVDELHMIGEGSRGAIL 483
Query: 527 EEV---IIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTK--RPVPLEHCLY 581
E ++ + I+ +SAT+ N + QK ++ T RPV L+ L
Sbjct: 484 EMTLAKVLYTSKTTQIIGMSATLTNVEDL--------QKFLQAEYYTSQFRPVELKEYLK 535
Query: 582 YSGEFYKV 589
+ Y+V
Sbjct: 536 INDAIYEV 543
>UNIPROTKB|Q8TDG4 [details] [associations]
symbol:HELQ "Helicase POLQ-like" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AF436845 GO:GO:0005524
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1204 GO:GO:0008026 EMBL:AK128665
EMBL:AC096768 EMBL:BC015428 EMBL:BC095473 EMBL:AL512702
IPI:IPI00152527 IPI:IPI00647582 IPI:IPI00807650 IPI:IPI00889496
RefSeq:NP_598375.2 UniGene:Hs.480101 ProteinModelPortal:Q8TDG4
SMR:Q8TDG4 IntAct:Q8TDG4 STRING:Q8TDG4 PhosphoSite:Q8TDG4
DMDM:296434521 PaxDb:Q8TDG4 PRIDE:Q8TDG4 DNASU:113510
Ensembl:ENST00000295488 GeneID:113510 KEGG:hsa:113510
UCSC:uc003hom.3 UCSC:uc003hoo.1 UCSC:uc003hop.1 CTD:113510
GeneCards:GC04M084328 HGNC:HGNC:18536 HPA:HPA036853 MIM:606769
neXtProt:NX_Q8TDG4 PharmGKB:PA164720529 InParanoid:Q8TDG4
OMA:SRPLENC OrthoDB:EOG4THVSJ PhylomeDB:Q8TDG4 GenomeRNAi:113510
NextBio:78853 ArrayExpress:Q8TDG4 Bgee:Q8TDG4 Genevestigator:Q8TDG4
Uniprot:Q8TDG4
Length = 1101
Score = 182 (69.1 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 71/266 (26%), Positives = 130/266 (48%)
Query: 689 VIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKG-SDRNLPQIVRVQSLL 747
++FC SK +C+ +A+ + L+ K + + C+ LK + NL +++ +
Sbjct: 581 LVFCPSKKNCENVAEMICKF-LSKEYLKHKEKEKCE-VIKNLKNIGNGNLCPVLK--RTI 636
Query: 748 RRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK-FDGR 806
G+A HH+GL ++++E + GV+ + T T A GVN PAR V+ LR + +
Sbjct: 637 PFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVI---LRAPYVAK 693
Query: 807 EFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLT 866
EF L +Y QM GRAGR G+D IG +++ +++ + + +I S
Sbjct: 694 EF--LKRNQYKQMIGRAGRAGIDTIGESILILQEK--DKQQVLELITKPLENCYSHLVQE 749
Query: 867 Y---IMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKTIECIK--G 921
+ I L L + LK+ L + F + QQ++L+++ + T+E ++
Sbjct: 750 FTKGIQTLFLSLIG-LKIATNLDDIY-HFMNGTFFGVQQKVLLKEKSLWEITVESLRYLT 807
Query: 922 EPAIEEYYDMYYEAEK---YNNQITE 944
E + + D Y++E+ YN IT+
Sbjct: 808 EKGLLQK-DTIYKSEEEVQYNFHITK 832
Score = 71 (30.1 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 48/187 (25%), Positives = 75/187 (40%)
Query: 424 TSAGKTVVAEYAFALATKHCTRAVYTA-PIKTISNQKYRDFSG-KFDVGLLTGDVS---- 477
TS GKT+VAE C + V P I +K S ++G + +
Sbjct: 361 TSGGKTLVAEILMLQELLCCRKDVLMILPYVAIVQEKISGLSSFGIELGFFVEEYAGSKG 420
Query: 478 ------LRPEASCLIMTTE----ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWE 527
R + S I T E ++ S++ G I + V+ DE+H + + RG E
Sbjct: 421 RFPPTKRREKKSLYIATIEKGHSLVNSLIETGR--IDSLGLVVVDELHMIGEGSRGATLE 478
Query: 528 EV---IIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTK--RPVPLEHCLYY 582
I+ + I+ +SAT+ N VE QK ++ T RPV L+ L
Sbjct: 479 MTLAKILYTSKTTQIIGMSATL-NNVE-------DLQKFLQAEYYTSQFRPVELKEYLKI 530
Query: 583 SGEFYKV 589
+ Y+V
Sbjct: 531 NDTIYEV 537
Score = 38 (18.4 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 38/131 (29%), Positives = 59/131 (45%)
Query: 1250 RNTSEPSLTPKLSVAK---ERLYNTAI-RLGELQAHFKVQIDPE--EYARDNLKFGLVEV 1303
R +E L K ++ K E YN I +LG +A FK ID + +LK GL +
Sbjct: 804 RYLTEKGLLQKDTIYKSEEEVQYNFHITKLG--RASFKGTIDLAYCDILYRDLKKGLEGL 861
Query: 1304 VYEWAKG-----TPFADICELTDVPEGLIV-RTIVRLDETCREFRNAAAIMGNSALYKKM 1357
V E TP+ D+ + P+ +I R +L E +N AAI+G S +
Sbjct: 862 VLESLLHLIYLTTPY-DLVSQCN-PDWMIYFRQFSQLSPA--E-QNVAAILGVSESFIGK 916
Query: 1358 ETASNAIKRDI 1368
+ + AI + +
Sbjct: 917 KASGQAIGKKV 927
>UNIPROTKB|G4N5J1 [details] [associations]
symbol:MGG_06124 "Activating signal cointegrator 1 complex
subunit 3" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K01529 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 GO:GO:0008026 RefSeq:XP_003711991.1
ProteinModelPortal:G4N5J1 EnsemblFungi:MGG_06124T0 GeneID:2684274
KEGG:mgr:MGG_06124 Uniprot:G4N5J1
Length = 1998
Score = 149 (57.5 bits), Expect = 4.2e-09, Sum P(6) = 4.2e-09
Identities = 41/125 (32%), Positives = 65/125 (52%)
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK 802
++ L+ +G+ IHHAG+ + ++E LF GV+KVL T T A GVN PA VV +
Sbjct: 597 LRDLVPKGMGIHHAGMTRSDRNLMERLFAEGVLKVLCCTATLAWGVNLPAAAVVIKGTQV 656
Query: 803 FDGREFRQLLPG--EYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRL- 859
+ +E + + G + Q+ GRAGR + G + ++C L H + +L
Sbjct: 657 YSAQEGKFVDLGILDVLQIFGRAGRPQFEDTG-IGMICTTA----DKLSHYLTAVTDQLP 711
Query: 860 -ESQF 863
ES+F
Sbjct: 712 IESRF 716
Score = 146 (56.5 bits), Expect = 7.5e-10, Sum P(4) = 7.5e-10
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 750 GIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGR-E- 807
GI +HHAGL+ +++ E LF +++L +T T A GVN PA VV + +D + E
Sbjct: 1442 GIGLHHAGLVESDRQLAEELFLNNKIQILVATSTLAWGVNLPAHLVVVKGTQFYDAKIEG 1501
Query: 808 FRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRD 840
++ + + QM GRAGR D G + +D
Sbjct: 1502 YKDMDLTDVLQMLGRAGRPQFDNSGVARIFTQD 1534
Score = 120 (47.3 bits), Expect = 4.2e-09, Sum P(6) = 4.2e-09
Identities = 38/128 (29%), Positives = 65/128 (50%)
Query: 473 TGDVSLRP----EASCLIMTTEILRSMLYRGA---DIIRDIEWVIFDEVHYVNDIERGVV 525
TGD+ L + ++ T E + +G ++++ + +I DEVH ++D ERG V
Sbjct: 390 TGDMHLTKTEIVQTQIIVTTPEKWDVVTRKGTGDTELVQKVRLLIIDEVHMLHD-ERGAV 448
Query: 526 WEEVIIMLPRH-------INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLE- 577
E ++ R I IV LSAT+PN ++ AD++ + + + + RPVPLE
Sbjct: 449 LESLVARTERQVESTQSLIRIVGLSATLPNFIDVADFLKVNRMQGLFYFDASFRPVPLEQ 508
Query: 578 HCLYYSGE 585
H + G+
Sbjct: 509 HFIGVKGK 516
Score = 116 (45.9 bits), Expect = 7.5e-10, Sum P(4) = 7.5e-10
Identities = 41/130 (31%), Positives = 68/130 (52%)
Query: 417 SVFVAAHTSAGKTVVAEYA--FALATKHCTRAVYTAPIKTISNQKYRDFSGKF--DVGL- 471
+V + + T +GKTV AE A +A + ++ VY AP+K + ++ +D+ + +GL
Sbjct: 1171 NVLLGSPTGSGKTVAAELAMWWAFRERPGSKVVYIAPMKALVRERVKDWGARLAQPMGLK 1230
Query: 472 ---LTGDVS--LRP--EASCLIMTTE----ILRSMLYRGADIIRDIEWVIFDEVHYVNDI 520
LTGD + R +A +I T E I RS RG +R + VI DE+H +
Sbjct: 1231 LVELTGDNTPDTRTIKDADVIITTPEKWDGISRSWQTRG--YVRQVSLVIIDEIHLLAG- 1287
Query: 521 ERGVVWEEVI 530
+RG + E ++
Sbjct: 1288 DRGPILEIIV 1297
Score = 88 (36.0 bits), Expect = 3.2e-06, Sum P(5) = 3.2e-06
Identities = 34/123 (27%), Positives = 54/123 (43%)
Query: 473 TGDVSLRPEASCLIMTTE----ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEE 528
T D +A +I T E I RS RG +R + VI DE+H + +RG + E
Sbjct: 1239 TPDTRTIKDADVIITTPEKWDGISRSWQTRG--YVRQVSLVIIDEIHLLAG-DRGPILEI 1295
Query: 529 VIIML-------PRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLY 581
++ + + ++ +S N + +W+G K+ + RPVPLE LY
Sbjct: 1296 IVSRMNYIAASTKNSVRLLGMSTACANATDLGNWLG-VKEGLFNFRHSV-RPVPLE--LY 1351
Query: 582 YSG 584
G
Sbjct: 1352 IDG 1354
Score = 45 (20.9 bits), Expect = 7.5e-10, Sum P(4) = 7.5e-10
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 347 DEILSVKSGGTTSILDDGGGQQQKEAWVVSGSTE-AIADRFHELVPDLALDFPFELDNFQ 405
DE+ S KSG +++ L D Q ++ S +E + +L+ LDF +L + +
Sbjct: 108 DEVASRKSGLSSNHLQD-----QISTFLDSSRSEDELQSSLTDLIGFDDLDFVIDLISHR 162
Query: 406 KE---AIYYLENGDSVFV 420
KE A ++ D+ FV
Sbjct: 163 KEVSGAAAASKSADATFV 180
Score = 40 (19.1 bits), Expect = 4.2e-09, Sum P(6) = 4.2e-09
Identities = 18/56 (32%), Positives = 23/56 (41%)
Query: 409 IYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFS 464
I Y N +++ V A T AGKT A L H Y P + N DF+
Sbjct: 302 IAYKTN-ENMLVCAPTGAGKTDAA----MLTILHAI-GQYVTP-NPLQNTTATDFA 350
Score = 40 (19.1 bits), Expect = 4.2e-09, Sum P(6) = 4.2e-09
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 357 TTSILDDGGGQQQKEAWVVSGSTEAIADRFHELVPDLALDFPFELDNFQKEAIYYLENGD 416
TTS+L +G G+ ++ S+ + + D LD E+D + + NGD
Sbjct: 35 TTSVLANGDGEDDQDNLSSPMSSGMDGHDVWDFISDEELD---EIDFDDNDYLDGAPNGD 91
Query: 417 SV 418
+
Sbjct: 92 GL 93
Score = 38 (18.4 bits), Expect = 4.2e-09, Sum P(6) = 4.2e-09
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 1077 DQVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLKLKDM 1122
+++ +L S+ A+ + LV+ + Y ++ KD+ L D+
Sbjct: 1465 NKIQILVATSTLAWGVNLPAHLVVVKGTQFYDAKIEGYKDMDLTDV 1510
Score = 37 (18.1 bits), Expect = 7.5e-10, Sum P(4) = 7.5e-10
Identities = 21/108 (19%), Positives = 43/108 (39%)
Query: 1144 HGCIKLEEHMKLTKENKRHKDEVNTLKFQMSDEALQQMPDFQGRIDVLKEIGCIDADLVV 1203
H C ++ +TK+ D ++ L + L + P + G ++E I A
Sbjct: 1561 HLCAEISAETIITKQ-----DALDYLTWTFFFRRLHKNPSYYGLEIPVEEQTSIAAQQAA 1615
Query: 1204 QIKGRVACEMNSG-EELICTECLFENQLDDLEPEEAVAIMSAFVFQQR 1250
+ ++S +EL ++C+ D++P IMS + +
Sbjct: 1616 N--DYIISMIDSSLDELATSKCVEVYPNGDVDPTPLGKIMSYYYLSHK 1661
>UNIPROTKB|F1RVE2 [details] [associations]
symbol:HELQ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00640000091272 SUPFAM:SSF47794 GO:GO:0008026
OMA:SRPLENC EMBL:CU467102 EMBL:CU468150 Ensembl:ENSSSCT00000010115
Uniprot:F1RVE2
Length = 1103
Score = 162 (62.1 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 62/238 (26%), Positives = 115/238 (48%)
Query: 689 VIFCFSKNHCDKLADGMSGI---DLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQS 745
++FC +K +C+ +A+ + I + EK + + K + G P + +
Sbjct: 583 LVFCPTKKNCENVAEMICKILSKEYLKHREKEKHELL--KNLKAISGGSV-CPVL---KH 636
Query: 746 LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK-FD 804
+ G+A HH+GL ++++E GV+ +L T T A GVN PA+ V+ LR +
Sbjct: 637 TIPFGVAYHHSGLTNDERKLLEEAHSAGVLCLLTCTSTLAAGVNLPAQRVI---LRAPYV 693
Query: 805 GREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGE--SDLKHIIVGSATRLESQ 862
+EF L +Y QM GRAGR G+D +G +++ +++ + + + +RL +
Sbjct: 694 AKEF--LKRNQYKQMIGRAGRAGIDSVGESILIFQEKDKQQVLELISRPLENCYSRLVQE 751
Query: 863 FRLTYIMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKTIECIK 920
F I L L + LK+ L + F S QQ++L+++ + T+E ++
Sbjct: 752 FTKG-IQTLFLSLIG-LKIATTLGDIY-HFMSGTFFGVQQKILLKEKSLWEITVESLR 806
Score = 75 (31.5 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 46/186 (24%), Positives = 75/186 (40%)
Query: 424 TSAGKTVVAEYAFALATKHCTR--AVYTAPIKTISNQKYRDFSG-KFDVGLLTGD----- 475
TS GKT+VAE L C R A+ P I +K S ++G +
Sbjct: 363 TSGGKTLVAEILM-LQELLCRRKDALMILPYVAIVQEKIAGLSSFGIELGFFVEEYAGSK 421
Query: 476 -----VSLRPEASCLIMTTE----ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVW 526
+ R + S I T E ++ S++ G I + V+ DE+H + + RG
Sbjct: 422 GKFPPIKRREKKSLYIATIEKGHSLVNSLIETGR--IGGLGLVVVDELHMIGEGSRGATL 479
Query: 527 EEV---IIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYS 583
E I+ + IV +SAT+ N + ++ + + RPV L+ L +
Sbjct: 480 EMTLAKILYTSKTTQIVGMSATLNNVEDLQAFL------RAEYYSSWFRPVELKEYLKIN 533
Query: 584 GEFYKV 589
Y+V
Sbjct: 534 DTIYEV 539
>UNIPROTKB|F1SU44 [details] [associations]
symbol:F1SU44 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
GeneTree:ENSGT00640000091272 GO:GO:0008026 EMBL:CU896688
Ensembl:ENSSSCT00000008903 OMA:NETIATY Uniprot:F1SU44
Length = 1027
Score = 154 (59.3 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 46/154 (29%), Positives = 77/154 (50%)
Query: 688 VVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDK--AFSRLKGSDRNLPQIVRVQS 745
V++F S+ K A + + L EK + +F + A + + ++ + + ++
Sbjct: 721 VLVFVHSRKETGKTARAIRDMCL----EKDTLGLFLREGSASTEVLRTEAEQCKNLELKD 776
Query: 746 LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDG 805
LL G AIHHAG+ + + ++E LF ++VL ST T A GVN PA TV+ + +
Sbjct: 777 LLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSP 836
Query: 806 REFRQLLPG--EYTQMAGRAGRRGLDKIGTVVVL 837
+ R G + QM GRAGR D G +++
Sbjct: 837 EKGRWTELGALDILQMLGRAGRPQYDTKGEGILI 870
Score = 93 (37.8 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 469 VGLLTGDVSL-RPEASC---LIMTTEILRSMLYRGAD--IIRDIEWVIFDEVHYVNDIER 522
V LTGD L + E S ++ T E + +G + + + +I DE+H ++D +R
Sbjct: 566 VAELTGDHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLIILDEIHLLHD-DR 624
Query: 523 GVVWEEVIIMLPRHIN-------IVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVP 575
G V E ++ R+I ++ LSAT+PN + A ++ K + + RPVP
Sbjct: 625 GPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVP 684
Query: 576 LE 577
LE
Sbjct: 685 LE 686
Score = 49 (22.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 26/97 (26%), Positives = 40/97 (41%)
Query: 412 LENGDSVFVAAHTSAGKTVVAEYAFALAT-KHCT----------RAVYTAPIKTISNQKY 460
LE +++ + A T AGKT VA KH + +Y AP++++ +
Sbjct: 493 LETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMV 552
Query: 461 RDFSGKF-----DVGLLTGDVSLRPEASCLIMTTEIL 492
F + V LTGD L E I T+I+
Sbjct: 553 GSFGKRLATYGITVAELTGDHQLCKEE---ISATQII 586
Score = 37 (18.1 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 452 IKTISNQKYRDFSGKFDVGLLTG 474
+ + N+K RD + ++ LL G
Sbjct: 140 LAVLKNEKLRDKERRKEIDLLLG 162
>ASPGD|ASPL0000030426 [details] [associations]
symbol:AN5514 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=IEA] [GO:0007129
"synapsis" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0006268 "DNA unwinding involved in
replication" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 EMBL:BN001305 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 eggNOG:COG1204 EMBL:AACD01000094 GO:GO:0008026
KO:K15271 OrthoDB:EOG4WWVSR RefSeq:XP_663118.1
ProteinModelPortal:Q5B1R6 EnsemblFungi:CADANIAT00003572
GeneID:2871792 KEGG:ani:AN5514.2 HOGENOM:HOG000216651
Uniprot:Q5B1R6
Length = 1385
Score = 144 (55.7 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 51/158 (32%), Positives = 80/158 (50%)
Query: 445 RAVYTAPIKTISNQKYRDFSGKFD-VGL----LTGDVSLRPEASC----LIMTT-EILRS 494
+ VY AP K++ ++++RD++ KF +GL LTGD + +I+TT E S
Sbjct: 299 KVVYQAPTKSLCSERFRDWNQKFHALGLQCAELTGDTDHSQLGNVQNRQIIVTTPEKWDS 358
Query: 495 MLYRGADIIR---DIEWVIFDEVHYVNDIERGVVWEEVIIMLPR---HINIVLLSATVPN 548
M + D IR ++ + DEVH + + RG E V+ + ++ V LSAT+PN
Sbjct: 359 MTRKWKDHIRLMQPVKLFLIDEVHTLKEA-RGATLEAVVSRMKSIGSNVRFVALSATIPN 417
Query: 549 TVEFADWIGR--TKQK---KIRVTGTTKRPVPLEHCLY 581
+ + A W+GR T Q G RPV L+ +Y
Sbjct: 418 SEDIATWLGRNATSQHVPAHREHFGEEFRPVKLQKFVY 455
Score = 111 (44.1 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 45/139 (32%), Positives = 72/139 (51%)
Query: 408 AIYYLENGDSVFVAAHTSAGKTVVAEYAFA----LATKHCTRAVYTAPIKTISNQKYRDF 463
AIY ++ D+V +AA T +GKTVV E A + + VY AP K++ ++++RD+
Sbjct: 260 AIY--KSDDNVVIAAPTGSGKTVVMELAICRLLNIRKDKKFKVVYQAPTKSLCSERFRDW 317
Query: 464 SGKFD-VGL----LTGDVSLRPEASC----LIMTT-EILRSMLYRGADIIRDIEWVIFDE 513
+ KF +GL LTGD + +I+TT E SM + D IR ++ V
Sbjct: 318 NQKFHALGLQCAELTGDTDHSQLGNVQNRQIIVTTPEKWDSMTRKWKDHIRLMQPVKLFL 377
Query: 514 VHYVNDIE--RGVVWEEVI 530
+ V+ ++ RG E V+
Sbjct: 378 IDEVHTLKEARGATLEAVV 396
Score = 76 (31.8 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 26/69 (37%), Positives = 35/69 (50%)
Query: 805 GREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFR 864
G+E+ L E QM GRAGR D T V+L R E S + ++ GS + +ES
Sbjct: 569 GQEYSDL---EVMQMLGRAGRPQFDDSATAVILTRKE--RVSHYERLVSGSES-VESSLH 622
Query: 865 LTYIMILHL 873
L +I HL
Sbjct: 623 LN--LIEHL 629
Score = 68 (29.0 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 24/93 (25%), Positives = 47/93 (50%)
Query: 687 PVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLP-QIVRVQS 745
P++IFC ++N A ++ L S S + +R++ KG ++ LP + ++
Sbjct: 483 PIMIFCSTRNSTVSTAKELAR--LWSMSSRL-VRMW--------KGPNKPLPVKHADLKV 531
Query: 746 LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVL 778
G+A HHAGL + ++E + +G + V+
Sbjct: 532 TTAAGVAFHHAGLETEDRHLVENGYLQGKISVI 564
>SGD|S000000974 [details] [associations]
symbol:BRR2 "RNA-dependent ATPase RNA helicase (DEIH box)"
species:4932 "Saccharomyces cerevisiae" [GO:0005682 "U5 snRNP"
evidence=IDA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000388 "spliceosome
conformational change to release U4 (or U4atac) and U1 (or U11)"
evidence=IMP] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 SGD:S000000974
GO:GO:0005524 GO:GO:0005681 GO:GO:0005682 GO:GO:0003676
EMBL:BK006939 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104562 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
EMBL:U18922 KO:K12854 OrthoDB:EOG4MD17F GO:GO:0046540 GO:GO:0004004
PIR:S50675 RefSeq:NP_011099.1 PDB:3HIB PDB:3IM1 PDB:3IM2
PDBsum:3HIB PDBsum:3IM1 PDBsum:3IM2 ProteinModelPortal:P32639
SMR:P32639 DIP:DIP-850N IntAct:P32639 MINT:MINT-606933
STRING:P32639 PaxDb:P32639 EnsemblFungi:YER172C GeneID:856919
KEGG:sce:YER172C CYGD:YER172c OMA:RDTHESS EvolutionaryTrace:P32639
NextBio:983377 Genevestigator:P32639 GermOnline:YER172C
GO:GO:0000388 Uniprot:P32639
Length = 2163
Score = 161 (61.7 bits), Expect = 1.8e-09, Sum P(4) = 1.8e-09
Identities = 42/125 (33%), Positives = 65/125 (52%)
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK 802
++ L+ GI HHAGL + + E LF G+++VL T T A GVN PA TV+
Sbjct: 793 LRKLIESGIGTHHAGLTRSDRSLSEDLFADGLLQVLVCTATLAWGVNLPAHTVIIKGTDV 852
Query: 803 FDGRE--FRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHI--IVGSATR 858
+ + + QL P + QM GRAGR D G ++ I +S++++ ++
Sbjct: 853 YSPEKGSWEQLSPQDVLQMLGRAGRPRYDTFGEGII-----ITDQSNVQYYLSVLNQQLP 907
Query: 859 LESQF 863
+ESQF
Sbjct: 908 IESQF 912
Score = 97 (39.2 bits), Expect = 1.8e-09, Sum P(4) = 1.8e-09
Identities = 40/154 (25%), Positives = 68/154 (44%)
Query: 401 LDNFQKEAIYYLENGDS-VFVAAHTSAGKTVVAEYAFALATKH------------CTRAV 447
L+ Q + + GDS + + A T +GKT +A A H + V
Sbjct: 499 LNPIQSKVFHAAFEGDSNMLICAPTGSGKTNIALLTVLKALSHHYNPKTKKLNLSAFKIV 558
Query: 448 YTAPIKTISNQKYRDFSGKFD-VGL----LTGDVSLR----PEASCLIMTTEI--LRSML 496
Y AP+K + ++ R+F + +G+ LTGD L E L+ T E + +
Sbjct: 559 YIAPLKALVQEQVREFQRRLAFLGIKVAELTGDSRLSRKQIDETQVLVSTPEKWDITTRN 618
Query: 497 YRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVI 530
I+ + +I DE+H ++D +RG V E ++
Sbjct: 619 SNNLAIVELVRLLIIDEIHLLHD-DRGPVLESIV 651
Score = 75 (31.5 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 35/132 (26%), Positives = 59/132 (44%)
Query: 458 QKYRDFSGKFDVGLLTGDVSLR----PEASCLIMTTEI--LRSMLYRGADIIRDIEWVIF 511
Q+ F G V LTGD L E L+ T E + + I+ + +I
Sbjct: 575 QRRLAFLG-IKVAELTGDSRLSRKQIDETQVLVSTPEKWDITTRNSNNLAIVELVRLLII 633
Query: 512 DEVHYVNDIERGVVWEEVIIML-------PRHINIVLLSATVPNTVEFADWIGRTKQKKI 564
DE+H ++D +RG V E ++ + I+ LSAT+PN + ++ R ++ +
Sbjct: 634 DEIHLLHD-DRGPVLESIVARTFWASKYGQEYPRIIGLSATLPNYEDVGRFL-RVPKEGL 691
Query: 565 RVTGTTKRPVPL 576
++ RP PL
Sbjct: 692 FYFDSSFRPCPL 703
Score = 45 (20.9 bits), Expect = 1.8e-09, Sum P(4) = 1.8e-09
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 966 TGQDHLLGAVVKAPSANNKEYIVMLLKPDLPSAS 999
+G D + G V+ S N K Y L LP+ S
Sbjct: 1711 SGNDSMAGKVLILTSHNMKAYYKKFLIEPLPTES 1744
Score = 43 (20.2 bits), Expect = 2.9e-09, Sum P(4) = 2.9e-09
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 922 EPAIEEYYDMYYEAEKYNNQITEAFMQS 949
EP E Y Y + NN+I + +QS
Sbjct: 1738 EPLPTESYLQYIIHDTLNNEIANSIIQS 1765
Score = 39 (18.8 bits), Expect = 0.00075, Sum P(4) = 0.00075
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 168 LEDSQSLERILPDGASNGEWVQEILKGGPAQVVPPSFKQGLDLG 211
L++ + E I N ++ILK A V+ PS ++ ++ G
Sbjct: 757 LKNKFAEENITHKLTKNDAGSKQILKTEAANVLDPSLRKLIESG 800
Score = 38 (18.4 bits), Expect = 1.8e-09, Sum P(4) = 1.8e-09
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 1175 DEALQQMPDFQGRI-DVLKEI 1194
D L+Q+P F +I + KEI
Sbjct: 1991 DNPLRQIPHFNNKILEKCKEI 2011
>ZFIN|ZDB-GENE-081105-64 [details] [associations]
symbol:si:ch211-251j10.5 "si:ch211-251j10.5"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 ZFIN:ZDB-GENE-081105-64 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
HOVERGEN:HBG051896 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 KO:K12854 GO:GO:0008026 EMBL:BX640472
EMBL:CR376723 IPI:IPI00608684 RefSeq:NP_001116729.1
UniGene:Dr.32574 SMR:B0S754 Ensembl:ENSDART00000109885
GeneID:799690 KEGG:dre:799690 NextBio:20933935 Uniprot:B0S754
Length = 2134
Score = 155 (59.6 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 46/154 (29%), Positives = 77/154 (50%)
Query: 688 VVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDK--AFSRLKGSDRNLPQIVRVQS 745
V++F S+ K A + + L EK + +F + A + + ++ + + ++
Sbjct: 718 VLVFVHSRKETGKTARAIRDMCL----EKDTLGLFLREGSASTEVLRTEAEQCKNLELKD 773
Query: 746 LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDG 805
LL G AIHHAG+ + + ++E LF ++VL ST T A GVN PA TV+ + +
Sbjct: 774 LLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSP 833
Query: 806 REFRQLLPG--EYTQMAGRAGRRGLDKIGTVVVL 837
+ R G + QM GRAGR D G +++
Sbjct: 834 EKGRWTELGALDILQMLGRAGRPQYDSKGEGILI 867
Score = 133 (51.9 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 47/158 (29%), Positives = 77/158 (48%)
Query: 396 DFPFELDNFQKEAIYYLENGD-SVFVAAHTSAGKTVVAEYAFALATKHCT--RAVYTAPI 452
+FPF + Q + + N D +VFV A T +GKT+ AE+A H R VY P+
Sbjct: 1320 NFPF-FNPIQTQVFNAVYNSDDNVFVGAPTGSGKTICAEFAILRMLLHNAEGRCVYITPM 1378
Query: 453 KTISNQKYRDFSGKFD------VGLLTG----DVSLRPEASCLIMTTEI--LRSMLYRGA 500
+ ++ Q + D+ KF V LLTG D+ L + ++ T + + S ++
Sbjct: 1379 EALAEQVFLDWHQKFQENLNKKVVLLTGETSTDLKLLGKGDIIVSTPDKWDILSRRWKQR 1438
Query: 501 DIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHIN 538
++++ I DEVH + + G V E VI R+I+
Sbjct: 1439 KNVQNVSLFIIDEVHLIGG-DNGPVLE-VICSRMRYIS 1474
Score = 117 (46.2 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 27/101 (26%), Positives = 51/101 (50%)
Query: 741 VRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNL 800
V ++ L G+ H GL P + ++E LF G ++V+ ++ + G N A V+ +
Sbjct: 1603 VTLKETLSNGVGYLHEGLSPTERRIVEHLFTSGAIQVVVASRSLCWGTNISAHLVIVMDT 1662
Query: 801 RKFDGREFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCR 839
+ ++G+ + P + QM G+A R D G V++C+
Sbjct: 1663 QYYNGKIHAYVDYPIYDVLQMVGKANRPLQDDEGRCVIMCQ 1703
Score = 91 (37.1 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 457 NQKYRDFSGKFDVGLLTG----DVSLRPEASCLIMTTEI--LRSMLYRGADIIRDIEWVI 510
+QK+++ K V LLTG D+ L + ++ T + + S ++ ++++ I
Sbjct: 1390 HQKFQENLNK-KVVLLTGETSTDLKLLGKGDIIVSTPDKWDILSRRWKQRKNVQNVSLFI 1448
Query: 511 FDEVHYVNDIERGVVWEEVII-------MLPRHINIVLLSATVPNTVEFADWIGRTKQKK 563
DEVH + + G V E + + R I IV LS+++ N + A W+G +
Sbjct: 1449 IDEVHLIGG-DNGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAHWLGCSTTAT 1507
Query: 564 IRVTGTTKRPVPLE 577
RPVPLE
Sbjct: 1508 FNFHPNV-RPVPLE 1520
Score = 90 (36.7 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 35/122 (28%), Positives = 57/122 (46%)
Query: 469 VGLLTGDVSLRPE----ASCLIMTTEILRSMLYRGAD--IIRDIEWVIFDEVHYVNDIER 522
V LTGD L E ++ T E + +G + + + +I DE+H ++D +R
Sbjct: 563 VSELTGDHQLCKEEINATQIIVCTPEKWDIITRKGGERTYTQLVRLIIIDEIHLLHD-DR 621
Query: 523 GVVWEEVIIMLPRHINI-------VLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVP 575
G V E +I R++ + + LSAT+PN + A + K + + RPVP
Sbjct: 622 GPVLESLIARTIRNVELTQEDVRLIGLSATLPNYEDVATCLRVDPSKGLFYFDNSFRPVP 681
Query: 576 LE 577
LE
Sbjct: 682 LE 683
Score = 53 (23.7 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 27/97 (27%), Positives = 42/97 (43%)
Query: 412 LENGDSVFVAAHTSAGKTVVAEYAFALAT-KHCT----------RAVYTAPIKTISNQKY 460
+E +++ V A T AGKT VA A KH + +Y AP++++ +
Sbjct: 490 METDENLLVCAPTGAGKTNVALMAMLREIGKHINMDGTINVADFKIIYIAPMRSLVQEMV 549
Query: 461 RDFSGKF-DVGL----LTGDVSLRPEASCLIMTTEIL 492
F + G+ LTGD L E I T+I+
Sbjct: 550 GSFGKRLASYGIIVSELTGDHQLCKEE---INATQII 583
Score = 40 (19.1 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 1225 LFENQLDDLEPEEAVAI 1241
L EN L DLE + ++I
Sbjct: 1784 LVENTLQDLEQSKCISI 1800
>FB|FBgn0002899 [details] [associations]
symbol:mus301 "mutagen-sensitive 301" species:7227
"Drosophila melanogaster" [GO:0007294 "germarium-derived oocyte
fate determination" evidence=IGI;IMP] [GO:0008298 "intracellular
mRNA localization" evidence=IMP;TAS] [GO:0048477 "oogenesis"
evidence=IGI;TAS] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0006417 "regulation of
translation" evidence=TAS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5 snRNP"
evidence=ISS] [GO:0004386 "helicase activity" evidence=ISS]
[GO:0009994 "oocyte differentiation" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016321 "female meiosis chromosome segregation"
evidence=IMP] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009949 GO:GO:0007294 EMBL:AE014296 GO:GO:0006417
GO:GO:0006200 GO:GO:0003676 GO:GO:0004386 GO:GO:0008298
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1204
GeneTree:ENSGT00640000091272 GO:GO:0030717 GO:GO:0016321
GO:GO:0008026 OMA:SRPLENC GO:GO:0009951 EMBL:BT011090
RefSeq:NP_648178.1 UniGene:Dm.15493 SMR:Q9VSE2 IntAct:Q9VSE2
STRING:Q9VSE2 EnsemblMetazoa:FBtr0076689 GeneID:38905
KEGG:dme:Dmel_CG7972 UCSC:CG7972-RA CTD:38905 FlyBase:FBgn0002899
InParanoid:Q9VSE2 OrthoDB:EOG4MKKXB GenomeRNAi:38905 NextBio:810944
Uniprot:Q9VSE2
Length = 1051
Score = 162 (62.1 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 52/159 (32%), Positives = 79/159 (49%)
Query: 689 VIFCFSKNHCDKLADGMSGIDLTSS------SEKSEIRVFCDKAFSRLKGSDRNLPQIVR 742
++FC S+ +C+ +A +S I SEK ++ DK L P + +
Sbjct: 512 LVFCPSRKNCENVALLLSRIVPKHKFFEHRRSEKLDLMDALDKMCGILS------PVLAK 565
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK 802
L GIA HH+GL ++ IE + GVV V+ T T A GVN PA+ V+
Sbjct: 566 T---LPYGIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLAAGVNLPAKRVIIR--AP 620
Query: 803 FDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDE 841
+ G+EF L +Y QM GRAGR GL + G +++ + +
Sbjct: 621 YVGQEFLTLC--KYKQMVGRAGRAGLGEAGESILIAQSK 657
Score = 68 (29.0 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 505 DIEWVIFDEVHYVNDIERGVVWEEV---IIMLPRHINIVLLSATVPNTVEFADWI 556
+I V+ DE+H + + RG E ++ L +I IV +SAT+ N E + ++
Sbjct: 384 EIGLVVVDELHLIGEKGRGATLEAFLTKVMFLNANIQIVGMSATIGNLSEISSFL 438
Score = 49 (22.3 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 31/127 (24%), Positives = 52/127 (40%)
Query: 417 SVFVAAHTSAGKTVVAEYAFALATKHCTR--AVYTAPIKTISNQKYRDFSG-KFDVGLLT 473
++ A TS GKT+VAE L C ++ P +I +K S D+ +
Sbjct: 282 NLIYALPTSGGKTLVAEILM-LRELLCRERNVLFILPYVSIVQEKVSAMSPFAIDLDFIV 340
Query: 474 GDVSLRPEASCLIMTTEILRSM----LYRGA-------DIIR--DIEWVIFDEVHYVNDI 520
+ + + C RS+ + +GA D+ R +I V+ DE+H + +
Sbjct: 341 EEYTAG-KGKCPPQPRRKRRSLFIASIEKGAVLMDSLIDVQRPHEIGLVVVDELHLIGEK 399
Query: 521 ERGVVWE 527
RG E
Sbjct: 400 GRGATLE 406
Score = 37 (18.1 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 153 FVRGSINSRPFRPGGLEDSQSLERILPDGASNGEWVQEILKGGPAQVVPPSFKQGL 208
F+ + +R FRP L++ L + S G+ ++EI P++ V ++ + +
Sbjct: 437 FLNADVYTRGFRPVELKEYIKCGPDLLEINSAGQTLEEIFV--PSRSVEYNYSEAV 490
>UNIPROTKB|E9PSY5 [details] [associations]
symbol:Helq "Protein Helq" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1560216 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI01007603 Ensembl:ENSRNOT00000031633 ArrayExpress:E9PSY5
Uniprot:E9PSY5
Length = 805
Score = 160 (61.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 47/157 (29%), Positives = 81/157 (51%)
Query: 689 VIFCFSKNHCDKLADGMSGI---DLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQS 745
++FC SK +C+ +A+ + D + E+ + + K+ + G + P + R
Sbjct: 536 LVFCPSKKNCENVAEMLCKFLSRDYLNHREEEKGELI--KSLRNV-GHGKVCPVLKRT-- 590
Query: 746 LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK-FD 804
+ G+A HH+GL ++++E + GV+ + T T A GVN PAR V+ LR +
Sbjct: 591 -IPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVI---LRAPYV 646
Query: 805 GREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDE 841
F L +Y QM GRAGR G+D G ++L +++
Sbjct: 647 ANTF--LKRNQYKQMIGRAGRAGIDTAGESILLLQEK 681
Score = 62 (26.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 42/184 (22%), Positives = 72/184 (39%)
Query: 424 TSAGKTVVAEYAFALATKHCTR--AVYTAPIKTISNQKYRDFSG-KFDVGLLTGD----- 475
TS GKT+VAE L C + + P I +K S ++G +
Sbjct: 316 TSGGKTLVAEILM-LQELLCRQKDVLLILPYVAIVQEKISSLSSFGIELGFFVEEYAGSK 374
Query: 476 -----VSLRPEASCLIMTTEILRSMLYRGADIIR--DIEWVIFDEVHYVNDIERGVVWEE 528
+ R + S I T E S++ + R + V+ DE+H + + RG E
Sbjct: 375 GRFPPIKRREKKSLYIATIEKGHSLVNALIETGRMGTLGLVVVDELHMIGEGSRGATLEM 434
Query: 529 V---IIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGE 585
++ + I+ +SAT+ N + ++ K + RPV L+ L +
Sbjct: 435 TLAKVLYTSKTTQIIGMSATLNNVEDLQAFL------KAEYYTSQFRPVELKEFLKVNDT 488
Query: 586 FYKV 589
Y+V
Sbjct: 489 IYEV 492
>UNIPROTKB|E9PT19 [details] [associations]
symbol:Helq "Protein Helq" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1560216
GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 IPI:IPI00958253 Ensembl:ENSRNOT00000002974
ArrayExpress:E9PT19 Uniprot:E9PT19
Length = 879
Score = 160 (61.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 47/157 (29%), Positives = 81/157 (51%)
Query: 689 VIFCFSKNHCDKLADGMSGI---DLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQS 745
++FC SK +C+ +A+ + D + E+ + + K+ + G + P + R
Sbjct: 536 LVFCPSKKNCENVAEMLCKFLSRDYLNHREEEKGELI--KSLRNV-GHGKVCPVLKRT-- 590
Query: 746 LLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK-FD 804
+ G+A HH+GL ++++E + GV+ + T T A GVN PAR V+ LR +
Sbjct: 591 -IPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVI---LRAPYV 646
Query: 805 GREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDE 841
F L +Y QM GRAGR G+D G ++L +++
Sbjct: 647 ANTF--LKRNQYKQMIGRAGRAGIDTAGESILLLQEK 681
Score = 62 (26.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 42/184 (22%), Positives = 72/184 (39%)
Query: 424 TSAGKTVVAEYAFALATKHCTR--AVYTAPIKTISNQKYRDFSG-KFDVGLLTGD----- 475
TS GKT+VAE L C + + P I +K S ++G +
Sbjct: 316 TSGGKTLVAEILM-LQELLCRQKDVLLILPYVAIVQEKISSLSSFGIELGFFVEEYAGSK 374
Query: 476 -----VSLRPEASCLIMTTEILRSMLYRGADIIR--DIEWVIFDEVHYVNDIERGVVWEE 528
+ R + S I T E S++ + R + V+ DE+H + + RG E
Sbjct: 375 GRFPPIKRREKKSLYIATIEKGHSLVNALIETGRMGTLGLVVVDELHMIGEGSRGATLEM 434
Query: 529 V---IIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGE 585
++ + I+ +SAT+ N + ++ K + RPV L+ L +
Sbjct: 435 TLAKVLYTSKTTQIIGMSATLNNVEDLQAFL------KAEYYTSQFRPVELKEFLKVNDT 488
Query: 586 FYKV 589
Y+V
Sbjct: 489 IYEV 492
>FB|FBgn0263599 [details] [associations]
symbol:l(3)72Ab "lethal (3) 72Ab" species:7227 "Drosophila
melanogaster" [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0005682 "U5 snRNP" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0007067 "mitosis" evidence=IMP]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
GO:GO:0007067 GO:GO:0003676 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR
GO:GO:0004004 GO:GO:0000381 EMBL:BT016121 EMBL:AY069270
RefSeq:NP_648818.3 UniGene:Dm.973 ProteinModelPortal:Q9VUV9
SMR:Q9VUV9 IntAct:Q9VUV9 STRING:Q9VUV9 PaxDb:Q9VUV9 PRIDE:Q9VUV9
EnsemblMetazoa:FBtr0075527 GeneID:39737 KEGG:dme:Dmel_CG5931
FlyBase:FBgn0036548 InParanoid:Q9VUV9 OrthoDB:EOG4S4MWW
PhylomeDB:Q9VUV9 GenomeRNAi:39737 NextBio:815125 Bgee:Q9VUV9
GermOnline:CG5931 Uniprot:Q9VUV9
Length = 2142
Score = 159 (61.0 bits), Expect = 2.7e-08, Sum P(4) = 2.7e-08
Identities = 61/237 (25%), Positives = 105/237 (44%)
Query: 637 REHPNRGK---QNKHSVVGIKNSG-GSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFC 692
R P++G N + V ++ G L+R +V + + V++F
Sbjct: 666 RVKPDKGLFYFDNSYRPVSLEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGRNQVLVFV 725
Query: 693 FSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQI--VRVQSLLRRG 750
S+ K A + + L E+ + F + + ++ Q+ ++ LL G
Sbjct: 726 HSRKETGKTARAVRDMCL----EQDTLGSFLKEGSASMEVLRTEAEQVKNTELKELLPYG 781
Query: 751 IAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGREFR- 809
AIHHAG+ + + ++E LF ++VL ST T A GVN PA TV+ + ++ + R
Sbjct: 782 FAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGRW 841
Query: 810 -QLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHII--VGSATRLESQF 863
+L + QM GRAGR D G ++ I S+L+ + + +ESQF
Sbjct: 842 VELSALDVLQMLGRAGRPQYDTKGEGIL-----ITNHSELQFYLSLLNQQLPIESQF 893
Score = 94 (38.1 bits), Expect = 2.7e-08, Sum P(4) = 2.7e-08
Identities = 37/122 (30%), Positives = 57/122 (46%)
Query: 469 VGLLTGDVSLRPE----ASCLIMTTEILRSMLYRGAD--IIRDIEWVIFDEVHYVNDIER 522
V LTGD L E ++ T E + +G + + + VI DE+H ++D ER
Sbjct: 566 VSELTGDHQLTREQIAATQVIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHLLHD-ER 624
Query: 523 GVVWEEVIIMLPRHIN-------IVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVP 575
G V E ++ R+I +V LSAT+PN + A ++ K + + RPV
Sbjct: 625 GPVLEALVARTIRNIETTQEEVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNSYRPVS 684
Query: 576 LE 577
LE
Sbjct: 685 LE 686
Score = 52 (23.4 bits), Expect = 0.00031, Sum P(4) = 0.00031
Identities = 25/97 (25%), Positives = 42/97 (43%)
Query: 412 LENGDSVFVAAHTSAGKTVVAEYAFALAT-KHCT----------RAVYTAPIKTISNQKY 460
L++ +++ + A T AGKT VA KH + +Y AP+K++ +
Sbjct: 493 LDSDENMLLCAPTGAGKTNVALLTMMREIGKHINEDGTINAQDFKIIYVAPMKSLVQEMV 552
Query: 461 RDFSGKF-----DVGLLTGDVSLRPEASCLIMTTEIL 492
+F + V LTGD L E I T+++
Sbjct: 553 GNFGRRLACYNLTVSELTGDHQLTREQ---IAATQVI 586
Score = 39 (18.8 bits), Expect = 2.7e-08, Sum P(4) = 2.7e-08
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 1225 LFENQLDDLEPEEAVAI 1241
L EN L DLE + +++
Sbjct: 1787 LVENTLSDLEQSKCISV 1803
Score = 39 (18.8 bits), Expect = 2.7e-08, Sum P(4) = 2.7e-08
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 1071 NCKIKIDQVGLLEDVSSAA 1089
N K K+ GLLE +SSAA
Sbjct: 1836 NSKTKVR--GLLEIISSAA 1852
Score = 37 (18.1 bits), Expect = 2.7e-08, Sum P(4) = 2.7e-08
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 1249 QRNTSEPSLTPKLSVAKERLYNTAIRL 1275
Q + S L P+L E++ + AIRL
Sbjct: 1900 QAHLSRLQLGPELQGDTEQILSKAIRL 1926
>UNIPROTKB|H0YAC4 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR012961
Pfam:PF08148 GO:GO:0005524 GO:GO:0016818 HGNC:HGNC:18734
ChiTaRS:SKIV2L2 EMBL:AC010480 EMBL:AC020728 Ensembl:ENST00000508716
Uniprot:H0YAC4
Length = 72
Score = 139 (54.0 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 1300 LVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKMET 1359
L++VVY WA G FA IC++TDV EG I+R + RL+E R+ AA +GN+ L K
Sbjct: 2 LMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKF-- 59
Query: 1360 ASNAIKRDIVF 1370
A + D +F
Sbjct: 60 AEGQYQMDKLF 70
>UNIPROTKB|H9L343 [details] [associations]
symbol:H9L343 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0055087 "Ski complex" evidence=IEA]
InterPro:IPR025696 Pfam:PF13234 GeneTree:ENSGT00690000102154
EMBL:AADN02042840 Ensembl:ENSGALT00000036117 OMA:LLSCHEL
Uniprot:H9L343
Length = 131
Score = 138 (53.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 39/121 (32%), Positives = 65/121 (53%)
Query: 1111 LDPVKDLKLKDMNLVEAYYKWAGLLRKMAANKC-HGCIKLEEHMKLTKENKRHKDEVNTL 1169
LDPV L+L+D VEA + L + +C HG + + +R + +V L
Sbjct: 12 LDPVGALQLRDPPAVEAAARARSLGAALGGFRCVHGP-RFPQLYSQFAARRRLQAQVEQL 70
Query: 1170 KFQMSDEALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQ 1229
++++SD +L +P+++ R+ VL+ +G + VQ+ GRVA + S EL+ TE L N
Sbjct: 71 QYELSDRSLLLLPEYRQRLGVLRALGYVADGGAVQLPGRVAALL-SCHELLLTELLLGNV 129
Query: 1230 L 1230
L
Sbjct: 130 L 130
>TIGR_CMR|SPO_1417 [details] [associations]
symbol:SPO_1417 "helicase, putative" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 GO:GO:0004386
RefSeq:YP_166658.1 ProteinModelPortal:Q5LTJ7 GeneID:3192722
KEGG:sil:SPO1417 PATRIC:23376149 HOGENOM:HOG000141658 OMA:IAQIRTW
ProtClustDB:CLSK2767239 Uniprot:Q5LTJ7
Length = 959
Score = 139 (54.0 bits), Expect = 6.9e-08, Sum P(3) = 6.9e-08
Identities = 34/93 (36%), Positives = 46/93 (49%)
Query: 736 NLPQIVRVQSLLRR---GIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPA 792
++ + + L+RR G A+ L P + L+ G V L +T+ MG+N
Sbjct: 172 SVENVYAIAELIRRQKGGAAVVMGALSPRTRNAQVDLYQNGEVDYLVATDAIGMGLNLDI 231
Query: 793 RTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGR 825
V F L KFDGR R L P E Q+AGRAGR
Sbjct: 232 DHVAFSALSKFDGRRMRPLAPNELAQIAGRAGR 264
Score = 79 (32.9 bits), Expect = 6.9e-08, Sum P(3) = 6.9e-08
Identities = 49/186 (26%), Positives = 77/186 (41%)
Query: 418 VFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDF---SGKFDVGLLTG 474
V V T+ GKT YA H T V P++ ++ + Y G V L+TG
Sbjct: 8 VAVLGPTNTGKT---HYAIERMLGHRT-GVIGLPLRLLAREVYDKIVALRGPSVVALVTG 63
Query: 475 DVSL-RPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIML 533
+ + P + T E + L GAD V DE+ D ERG V+ + ++
Sbjct: 64 EERIVPPRTQYWVCTVEAMPEGL--GADC------VAVDEIQLCADPERGHVFTDRLLRA 115
Query: 534 PR-HINIVLLSAT----VPNTVEFADWIGRTKQKKIRVTGTTK--RPVPLEHCLYYSGE- 585
H ++L S T + V A ++ R + ++ TG+ K R P + +S E
Sbjct: 116 RGLHETLLLGSDTMRGPIAALVPEAQFVRRERMSQLVYTGSKKITRMPPRSAIVGFSVEN 175
Query: 586 FYKVCE 591
Y + E
Sbjct: 176 VYAIAE 181
Score = 48 (22.0 bits), Expect = 6.9e-08, Sum P(3) = 6.9e-08
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 875 RVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKTIECI--KGEPAIE 926
R E VED + + E +Q+ + + +L+R+L Q + + KGE +E
Sbjct: 444 RGETRAVEDRVSDALHERLTQRFVDRRTSVLLRRLKQKEALLAEVNDKGEVTVE 497
Score = 38 (18.4 bits), Expect = 6.9e-07, Sum P(3) = 6.9e-07
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 1313 FADICELTDVPEGLIVRTIVRLDET 1337
F + E +P+ + R I R+D T
Sbjct: 386 FGHLHERGAIPDDFMARQIRRIDRT 410
>UNIPROTKB|E3W980 [details] [associations]
symbol:HELQ "Helicase POLQ-like" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0003676 GO:GO:0004386 EMBL:AC096768
HGNC:HGNC:18536 IPI:IPI00965172 ProteinModelPortal:E3W980
SMR:E3W980 Ensembl:ENST00000510985 UCSC:uc010ikb.3
ArrayExpress:E3W980 Bgee:E3W980 Uniprot:E3W980
Length = 1034
Score = 182 (69.1 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 71/266 (26%), Positives = 130/266 (48%)
Query: 689 VIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKG-SDRNLPQIVRVQSLL 747
++FC SK +C+ +A+ + L+ K + + C+ LK + NL +++ +
Sbjct: 514 LVFCPSKKNCENVAEMICKF-LSKEYLKHKEKEKCE-VIKNLKNIGNGNLCPVLK--RTI 569
Query: 748 RRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK-FDGR 806
G+A HH+GL ++++E + GV+ + T T A GVN PAR V+ LR + +
Sbjct: 570 PFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVI---LRAPYVAK 626
Query: 807 EFRQLLPGEYTQMAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLT 866
EF L +Y QM GRAGR G+D IG +++ +++ + + +I S
Sbjct: 627 EF--LKRNQYKQMIGRAGRAGIDTIGESILILQEK--DKQQVLELITKPLENCYSHLVQE 682
Query: 867 Y---IMILHLLRVEELKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKTIECIK--G 921
+ I L L + LK+ L + F + QQ++L+++ + T+E ++
Sbjct: 683 FTKGIQTLFLSLIG-LKIATNLDDIY-HFMNGTFFGVQQKVLLKEKSLWEITVESLRYLT 740
Query: 922 EPAIEEYYDMYYEAEK---YNNQITE 944
E + + D Y++E+ YN IT+
Sbjct: 741 EKGLLQK-DTIYKSEEEVQYNFHITK 765
Score = 40 (19.1 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 424 TSAGKTVVAEYAFALATKHCTRAVYTA-PIKTISNQK 459
TS GKT+VAE C + V P I +K
Sbjct: 361 TSGGKTLVAEILMLQELLCCRKDVLMILPYVAIVQEK 397
Score = 38 (18.4 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 38/131 (29%), Positives = 59/131 (45%)
Query: 1250 RNTSEPSLTPKLSVAK---ERLYNTAI-RLGELQAHFKVQIDPE--EYARDNLKFGLVEV 1303
R +E L K ++ K E YN I +LG +A FK ID + +LK GL +
Sbjct: 737 RYLTEKGLLQKDTIYKSEEEVQYNFHITKLG--RASFKGTIDLAYCDILYRDLKKGLEGL 794
Query: 1304 VYEWAKG-----TPFADICELTDVPEGLIV-RTIVRLDETCREFRNAAAIMGNSALYKKM 1357
V E TP+ D+ + P+ +I R +L E +N AAI+G S +
Sbjct: 795 VLESLLHLIYLTTPY-DLVSQCN-PDWMIYFRQFSQLSPA--E-QNVAAILGVSESFIGK 849
Query: 1358 ETASNAIKRDI 1368
+ + AI + +
Sbjct: 850 KASGQAIGKKV 860
>UNIPROTKB|H9L351 [details] [associations]
symbol:H9L351 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 GeneTree:ENSGT00640000091272 EMBL:AADN02064073
EMBL:AADN02064074 Ensembl:ENSGALT00000021750
Ensembl:ENSGALT00000036125 Uniprot:H9L351
Length = 254
Score = 148 (57.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 36/99 (36%), Positives = 54/99 (54%)
Query: 741 VRVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNL 800
+ ++ LL G AIHHAG+ + + ++E LF ++VL ST T A GVN PA TV+
Sbjct: 32 LELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGT 91
Query: 801 RKFDGREFRQLLPG--EYTQMAGRAGRRGLDKIGTVVVL 837
+ + + R G + QM GRAGR D G +++
Sbjct: 92 QVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILI 130
>ASPGD|ASPL0000051297 [details] [associations]
symbol:AN10194 species:162425 "Emericella nidulans"
[GO:0000393 "spliceosomal conformational changes to generate
catalytic conformation" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 EMBL:BN001307
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
GO:GO:0046540 GO:GO:0000388 GO:GO:0008026
EnsemblFungi:CADANIAT00008099 OMA:AMNEACY Uniprot:C8VMF3
Length = 2208
Score = 150 (57.9 bits), Expect = 7.2e-06, Sum P(6) = 7.2e-06
Identities = 36/103 (34%), Positives = 56/103 (54%)
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK 802
++ +L G IHHAGL ++ ++ LF G ++VL T T A GVN PA TV+ +
Sbjct: 829 LKDILPYGFGIHHAGLSLADRDSVQALFKDGSIQVLVCTATLAWGVNLPAHTVIIKGTQV 888
Query: 803 FDGRE--FRQLLPGEYTQMAGRAGRRGLDKIGT-VVVLCRDEI 842
+ + + +L P + QM GRAGR D G +++ + EI
Sbjct: 889 YSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIITTQAEI 931
Score = 117 (46.2 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 384 DRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVVAEYAFAL--ATK 441
D + L PD + F+ E+ D+VF+ A T +GKTV AE A A +
Sbjct: 1372 DEYQRLYPDWEYFNKIQTQTFKT----LFESDDNVFIGAPTGSGKTVCAELAILRHWAKE 1427
Query: 442 HCTRAVYTAPIKTISNQKYRDF-------SGKFDVGLLTGDVS--LRPEA-SCLIMTT-- 489
RAVY AP + + + + D+ +G + LTG+++ L+ A S L++ T
Sbjct: 1428 DSGRAVYVAPFQELIDSRLEDWKKRLSGLAGGKSIAKLTGEMTADLKILAGSDLVLATPT 1487
Query: 490 --EILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVI 530
++L S ++ +R +E + DE+H + G V+E V+
Sbjct: 1488 QWDVL-SRQWQKRKNVRAVELFVADELHMLGGYG-GYVYEVVV 1528
Score = 115 (45.5 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 29/93 (31%), Positives = 46/93 (49%)
Query: 747 LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGR 806
L GI +H L K ++ L+ G ++V+ ++ +N VV + F+GR
Sbjct: 1670 LSHGIGYYHEALSQTDKRIVSHLYNIGAIQVVIASRDVCWELNLTGHLVVVMGTQFFEGR 1729
Query: 807 EFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVL 837
E R + P E QM G+A R G DK+G V++
Sbjct: 1730 EHRYIDYPISEILQMFGKASRPGQDKVGRGVLM 1762
Score = 85 (35.0 bits), Expect = 7.2e-06, Sum P(6) = 7.2e-06
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 469 VGLLTGDVSLRPEASC---LIMTTEILRSMLYRGAD---IIRDIEWVIFDEVHYVNDIER 522
V LTGD L + +I+TT ++ R A + + +I DE+H ++D ER
Sbjct: 619 VAELTGDRQLTKQQIAETQVIVTTPEKFDVITRKASETSYTKLVRLIIIDEIHLLHD-ER 677
Query: 523 GVVWEEVIIMLPRHIN-------IVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVP 575
G V E ++ R + IV LSAT+PN + A ++ K + + RP P
Sbjct: 678 GPVIESIVSRTIRQVEQTGDAVRIVGLSATLPNYRDVASFLRVDPAKGLFHFDGSYRPCP 737
Query: 576 LE 577
L+
Sbjct: 738 LK 739
Score = 77 (32.2 bits), Expect = 3.9e-05, Sum P(6) = 3.9e-05
Identities = 27/104 (25%), Positives = 49/104 (47%)
Query: 445 RAVYTAPIKTISNQKYRDFSGKF-----DVGLLTGDVSLRPEASC---LIMTTEILRSML 496
+ VY +P+K + ++ +F + V LTGD L + +I+TT ++
Sbjct: 590 KIVYISPLKALVQEQVENFGRRLAPYGIKVAELTGDRQLTKQQIAETQVIVTTPEKFDVI 649
Query: 497 YRGAD---IIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHI 537
R A + + +I DE+H ++D ERG V E ++ R +
Sbjct: 650 TRKASETSYTKLVRLIIIDEIHLLHD-ERGPVIESIVSRTIRQV 692
Score = 41 (19.5 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 323 IDSDAEGKTTVGFNSVKEADLSVLDEILSVKSGGTTSILDDGGGQQQK 370
+ DA+ + V V+ +LDEI G T S D+ G+ +K
Sbjct: 382 VAEDADARNLVESEMVEAGHRGILDEI----RGKTVS-RDNDSGRPEK 424
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 38 IKSLPDFILPPAFPRETAESIKEHIEDKYLSMGLDTNEFSP-EKVGRQ-WDFD 88
++S D +L E + K+ D L LD EF+ +G++ D+D
Sbjct: 146 VRSAADAVLEVLKDEEMKDFDKKREIDDLLGTSLDPKEFNELVNLGKKITDYD 198
Score = 39 (18.8 bits), Expect = 7.2e-06, Sum P(6) = 7.2e-06
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 893 HSQKKLPEQQQLLMRKLAQPPKT-IECIKGEP--AI--EEYYDMYYEAEKYNNQITEAF 946
HS+ ++ Q L+ PP T + ++ P A+ +EY +Y + E +N T+ F
Sbjct: 1334 HSETRIAVSFQKLILPERFPPHTPLLDMQRAPVKALKRDEYQRLYPDWEYFNKIQTQTF 1392
Score = 37 (18.1 bits), Expect = 7.2e-06, Sum P(6) = 7.2e-06
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 400 ELDNFQKEAI--YYLENGDSVFVAAHTSAGKTVVA 432
EL+ Q + + ++G+ + V A T +GKT VA
Sbjct: 532 ELNRIQTKCYPSAFQDDGN-MLVCAPTGSGKTNVA 565
>DICTYBASE|DDB_G0278937 [details] [associations]
symbol:DDB_G0278937 "ATP-dependent RNA helicase
SUPV3L1, mitochondrial" species:44689 "Dictyostelium discoideum"
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0278937 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000024 GO:GO:0004386 eggNOG:COG0513 RefSeq:XP_641977.1
EnsemblProtists:DDB0218122 GeneID:8621709 KEGG:ddi:DDB_G0278937
InParanoid:Q54XQ3 ProtClustDB:CLSZ2846828 Uniprot:Q54XQ3
Length = 904
Score = 121 (47.7 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 34/101 (33%), Positives = 52/101 (51%)
Query: 746 LLRRGI--AIHHAGLLPIVKEVIEMLFCRGV-VKVLFSTETFAMGVNAPARTVVFDNLRK 802
L ++G+ A+ + L P + LF V VL +T+ MG+N V+F L+K
Sbjct: 584 LEKQGLKCAVVYGSLPPTTRVQQAKLFNTDESVDVLIATDAIGMGLNLNIGRVIFLTLKK 643
Query: 803 FDGREFRQLLPGEYTQMAGRAGRRGLD-KIGTVVVLCRDEI 842
+DG R+L E Q+AGRAGR G +G+V R ++
Sbjct: 644 YDGEVDRELYASEVKQIAGRAGRFGTKYPVGSVTTFTRKDL 684
Score = 73 (30.8 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 26/113 (23%), Positives = 50/113 (44%)
Query: 424 TSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFSGK-FDVGLLTGDVSLR-PE 481
T++GKT Y VY P++ ++++ Y + D L+TG + + P
Sbjct: 412 TNSGKT----YNALKRLMESESGVYCGPLRLLAHEVYDKMNENGLDTSLMTGQLRINNPN 467
Query: 482 ASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLP 534
++ T E++ + D + +E + DE ++D RG W I+ +P
Sbjct: 468 STHSSCTIEMVST------D--KMVEVAVIDEFQLMSDTIRGQSWTRAILGIP 512
Score = 52 (23.4 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 18/76 (23%), Positives = 38/76 (50%)
Query: 221 NVYKDQDQSSLKSTSDEKLNELSVQFDDLFKKAWEEDVAEFEKDDWLPNRIKIMLYWRL- 279
N ++++ +K + EK + + + +D +++ +ED E E+D+ +KI+ R
Sbjct: 335 NKIENEENEKVKVSDQEKEEKENDEENDEYEEDEDEDDEEDEEDE---KNLKILSDLREP 391
Query: 280 HPFGNMQHKLKRKKVL 295
H + K KR +L
Sbjct: 392 HKWYTEARKFKRNIIL 407
>UNIPROTKB|G4MUT4 [details] [associations]
symbol:MGG_01682 "ATP-dependent RNA helicase SUV3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
EMBL:CM001232 RefSeq:XP_003714671.1 ProteinModelPortal:G4MUT4
EnsemblFungi:MGG_01682T0 GeneID:2679359 KEGG:mgr:MGG_01682
Uniprot:G4MUT4
Length = 757
Score = 103 (41.3 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 778 LFSTETFAMGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQMAGRAGR 825
+ +++ MG+N R VVFD KFDG E R L E Q+ GRAGR
Sbjct: 420 IVASDAIGMGLNLEIRRVVFDTTNKFDGSERRFLGESEIKQIGGRAGR 467
Score = 94 (38.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 32/136 (23%), Positives = 59/136 (43%)
Query: 424 TSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFSGKF-DVGLLTGDVSLRPEA 482
T++GKT Y A + T VY P++ ++++ Y K LLTG+ PE
Sbjct: 208 TNSGKT----YNALKALESATTGVYAGPLRLLAHEVYTRMVAKGRSCALLTGEEQRWPED 263
Query: 483 SCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLP-RHINIVL 541
T + S A + ++ + DE+ + D +RG W + ++ + R +++
Sbjct: 264 -----TQSFISSCTVEMAPLNTVVDVAVIDEIQMIADPDRGWAWTQAVLGIQAREVHLCG 318
Query: 542 LSATVPNTVEFADWIG 557
TV A+ +G
Sbjct: 319 EERTVDLIKRLAESMG 334
>UNIPROTKB|I3LT20 [details] [associations]
symbol:LOC100525691 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
GeneTree:ENSGT00640000091272 GO:GO:0008026 EMBL:CU896688
Ensembl:ENSSSCT00000023488 Uniprot:I3LT20
Length = 354
Score = 139 (54.0 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 51/157 (32%), Positives = 77/157 (49%)
Query: 397 FPFELDNFQKEAIYYLENGD-SVFVAAHTSAGKTVVAEYAFA--LATKHCTRAVYTAPIK 453
FPF + Q + + N D +VFV A T +GKT+ AE+A L R VY P++
Sbjct: 159 FPF-FNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQNSEGRCVYITPME 217
Query: 454 TISNQKYRDFSGKFD------VGLLTG----DVSLRPEASCLIMTTEI--LRSMLYRGAD 501
++ Q Y D+ KF V LLTG D+ L + + +I T E + S ++
Sbjct: 218 ALAEQVYMDWYEKFQDRLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWKQRK 277
Query: 502 IIRDIEWVIFDEVHYVNDIERGVVWEEVIIMLPRHIN 538
+++I + DEVH + E G V E VI R+I+
Sbjct: 278 NVQNINLFVVDEVHLIGG-ENGPVLE-VICSRMRYIS 312
>UNIPROTKB|I3LAH4 [details] [associations]
symbol:I3LAH4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00640000091272 EMBL:CU104757
Ensembl:ENSSSCT00000025204 OMA:FMKEGSA Uniprot:I3LAH4
Length = 197
Score = 125 (49.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 742 RVQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLR 801
+V+ L G +IHHAG+L + ++E LF G +KVL T T A GVN PA V+ +R
Sbjct: 130 QVRELFPDGFSIHHAGMLRQDRNLVESLFSNGHIKVLVCTATLAWGVNLPAHAVII-KVR 188
Query: 802 KF 803
F
Sbjct: 189 SF 190
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 537 INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
I I+ LSAT+PN ++ A ++ + RPVPL
Sbjct: 2 IRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVPL 41
>UNIPROTKB|B4E0P5 [details] [associations]
symbol:SNRNP200 "U5 small nuclear ribonucleoprotein 200 kDa
helicase" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR001650
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0030529 GO:GO:0004386 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AC021188 UniGene:Hs.246112
HGNC:HGNC:30859 ChiTaRS:SNRNP200 EMBL:AK303465 IPI:IPI00927472
SMR:B4E0P5 STRING:B4E0P5 Ensembl:ENST00000429650
HOGENOM:HOG000031250 HOVERGEN:HBG078981 Uniprot:B4E0P5
Length = 595
Score = 116 (45.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 26/99 (26%), Positives = 51/99 (51%)
Query: 743 VQSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRK 802
++ L G+ H GL P+ + ++E LF G ++V+ ++ + G+N A V+ + +
Sbjct: 136 LKETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQY 195
Query: 803 FDGREFRQL-LP-GEYTQMAGRAGRRGLDKIGTVVVLCR 839
++G+ + P + QM G A R D G V++C+
Sbjct: 196 YNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQ 234
Score = 65 (27.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 533 LPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLE 577
+ R I IV LS+++ N + A W+G + RPVPLE
Sbjct: 8 IERPIRIVALSSSLSNAKDVAHWLGCSATSTFNFHPNV-RPVPLE 51
>UNIPROTKB|I3LAA7 [details] [associations]
symbol:I3LAA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GeneTree:ENSGT00700000104562 GO:GO:0008026
Ensembl:ENSSSCT00000023674 OMA:ENDQDET Uniprot:I3LAA7
Length = 268
Score = 107 (42.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 40/132 (30%), Positives = 67/132 (50%)
Query: 472 LTGDVS--LRPEASC-LIMTTE-----ILRSMLYRGADIIRDIEWVIFDEVHYVNDIERG 523
LTGDV+ ++ A LI+TT + RS ++ + ++ + +I DE+H + + ERG
Sbjct: 19 LTGDVTPDMKSIAKADLIVTTPEKWDGVSRS--WQNRNYVKQVTILIIDEIHLLGE-ERG 75
Query: 524 VVWEEVII---MLPRH----INIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPL 576
V E ++ + H + IV LS + N + ADW+ +Q + + RPVPL
Sbjct: 76 PVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLN-IRQMGLFNFRPSVRPVPL 134
Query: 577 E-HCLYYSGEFY 587
E H + G+ Y
Sbjct: 135 EVHIQGFPGQHY 146
Score = 61 (26.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/93 (25%), Positives = 41/93 (44%)
Query: 687 PVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSL 746
PV+IF S+ A + T K + + ++ + G+ R+ ++
Sbjct: 169 PVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMD-EREMENIIGTIRDS----NLKLT 223
Query: 747 LRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLF 779
L GI +HHAGL ++ +E LF V+V F
Sbjct: 224 LAFGIGMHHAGLHERDRKTVEELFVNCKVQVYF 256
>GENEDB_PFALCIPARUM|PF14_0234 [details] [associations]
symbol:PF14_0234 "DNA-directed DNA polymerase,
putative" species:5833 "Plasmodium falciparum" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0003887 KO:K02349
RefSeq:XP_001348408.1 ProteinModelPortal:Q8ILK9
EnsemblProtists:PF14_0234:mRNA GeneID:811816 KEGG:pfa:PF14_0234
EuPathDB:PlasmoDB:PF3D7_1425400 HOGENOM:HOG000281276
ProtClustDB:CLSZ2432457 Uniprot:Q8ILK9
Length = 1236
Score = 97 (39.2 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 32/142 (22%), Positives = 67/142 (47%)
Query: 686 LPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIV--RV 743
L +IFC +K C+ + ++ + ++ + I + D LK N+ + + ++
Sbjct: 640 LNTLIFCCTKKMCEFYINLIN--EYLNTLKSLPIPQYIDMKRKELKEKIYNIDKCIYEKM 697
Query: 744 QSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKF 803
L+ G+ +++ + VK ++E+ + + +L T T ++G+N V+ + F
Sbjct: 698 HKLISNGLCYYYSDISHSVKRLLEVAYKEKTLFLLTCTSTLSVGLNLFVDRVIISS--PF 755
Query: 804 DGREFRQLLPGEYTQMAGRAGR 825
+ F L +Y QM GRA R
Sbjct: 756 VAQNF--LTYTQYKQMIGRAAR 775
Score = 71 (30.1 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 29/102 (28%), Positives = 47/102 (46%)
Query: 509 VIFDEVHYVNDIERGVVWEEV---IIMLPR---HINIVLLSATVPNTVEFADWIGRTKQK 562
VI DE H++N+ RG+ E + I+ + + I I+ +S T+ N W+
Sbjct: 208 VIIDEFHHINEKGRGIYIENIVSKILYMNKKRSRIKIICMSGTLNNISILKKWM------ 261
Query: 563 KIRVTGTTKRPVPL-EH--CLY--YS----GEFYKVCENEAF 595
K + +T RP + EH C + Y G+FY C +F
Sbjct: 262 KAKFYISTYRPQEIKEHYVCNFNVYKKVQDGKFYNTCNVFSF 303
Score = 65 (27.9 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 400 ELDNFQKEAIYYL-----ENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTA-PIK 453
EL +Q E + L E G++ A TS GKT+V E K+ + ++ P+K
Sbjct: 63 ELYEWQDECLRELRKVNWEKGENFICVAPTSGGKTLVTELFIFEEIKNGKKQIFFLFPLK 122
Query: 454 TISNQK 459
++ N+K
Sbjct: 123 SLINEK 128
>UNIPROTKB|Q8ILK9 [details] [associations]
symbol:PF14_0234 "DNA-directed DNA polymerase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0003887 KO:K02349
RefSeq:XP_001348408.1 ProteinModelPortal:Q8ILK9
EnsemblProtists:PF14_0234:mRNA GeneID:811816 KEGG:pfa:PF14_0234
EuPathDB:PlasmoDB:PF3D7_1425400 HOGENOM:HOG000281276
ProtClustDB:CLSZ2432457 Uniprot:Q8ILK9
Length = 1236
Score = 97 (39.2 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 32/142 (22%), Positives = 67/142 (47%)
Query: 686 LPVVIFCFSKNHCDKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIV--RV 743
L +IFC +K C+ + ++ + ++ + I + D LK N+ + + ++
Sbjct: 640 LNTLIFCCTKKMCEFYINLIN--EYLNTLKSLPIPQYIDMKRKELKEKIYNIDKCIYEKM 697
Query: 744 QSLLRRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKF 803
L+ G+ +++ + VK ++E+ + + +L T T ++G+N V+ + F
Sbjct: 698 HKLISNGLCYYYSDISHSVKRLLEVAYKEKTLFLLTCTSTLSVGLNLFVDRVIISS--PF 755
Query: 804 DGREFRQLLPGEYTQMAGRAGR 825
+ F L +Y QM GRA R
Sbjct: 756 VAQNF--LTYTQYKQMIGRAAR 775
Score = 71 (30.1 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 29/102 (28%), Positives = 47/102 (46%)
Query: 509 VIFDEVHYVNDIERGVVWEEV---IIMLPR---HINIVLLSATVPNTVEFADWIGRTKQK 562
VI DE H++N+ RG+ E + I+ + + I I+ +S T+ N W+
Sbjct: 208 VIIDEFHHINEKGRGIYIENIVSKILYMNKKRSRIKIICMSGTLNNISILKKWM------ 261
Query: 563 KIRVTGTTKRPVPL-EH--CLY--YS----GEFYKVCENEAF 595
K + +T RP + EH C + Y G+FY C +F
Sbjct: 262 KAKFYISTYRPQEIKEHYVCNFNVYKKVQDGKFYNTCNVFSF 303
Score = 65 (27.9 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 400 ELDNFQKEAIYYL-----ENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTA-PIK 453
EL +Q E + L E G++ A TS GKT+V E K+ + ++ P+K
Sbjct: 63 ELYEWQDECLRELRKVNWEKGENFICVAPTSGGKTLVTELFIFEEIKNGKKQIFFLFPLK 122
Query: 454 TISNQK 459
++ N+K
Sbjct: 123 SLINEK 128
>CGD|CAL0002663 [details] [associations]
symbol:SUV3 species:5476 "Candida albicans" [GO:0009060
"aerobic respiration" evidence=IMP] [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0045025
"mitochondrial degradosome" evidence=IEA] [GO:0000262
"mitochondrial chromosome" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0071467 "cellular response to pH"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0006264
"mitochondrial DNA replication" evidence=IEA] [GO:0000957
"mitochondrial RNA catabolic process" evidence=IEA] [GO:0000372
"Group I intron splicing" evidence=IEA] [GO:0000965 "mitochondrial
RNA 3'-end processing" evidence=IEA] [GO:0044011 "single-species
biofilm formation on inanimate substrate" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036187 "cell growth
mode switching, budding to filamentous" evidence=IMP] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0008859
"exoribonuclease II activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 CGD:CAL0002663 GO:GO:0005524 GO:GO:0071216
GO:GO:0001410 GO:GO:0036180 GO:GO:0003676 GO:GO:0035690
GO:GO:0004386 GO:GO:0009060 GO:GO:0044011 InterPro:IPR014001
SMART:SM00487 GO:GO:0071467 GO:GO:0036177 GO:GO:0036187
eggNOG:COG0513 EMBL:AACQ01000142 EMBL:AACQ01000141
RefSeq:XP_712911.1 RefSeq:XP_712944.1 ProteinModelPortal:Q59TB2
STRING:Q59TB2 GeneID:3645451 GeneID:3645490 KEGG:cal:CaO19.11994
KEGG:cal:CaO19.4519 Uniprot:Q59TB2
Length = 720
Score = 104 (41.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 28/98 (28%), Positives = 44/98 (44%)
Query: 748 RRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGRE 807
R + + + L P ++ F G VL +++ MG+N +VF + KF+G
Sbjct: 404 RLKVGVIYGALPPEIRSQEASKFNNGEYDVLVASDAIGMGLNLKINRIVFSGVNKFNGST 463
Query: 808 FRQLLPGEYTQMAGRAGRRGLD---KIGTVVVLCRDEI 842
+L + Q+AGRAGR K G V L R +
Sbjct: 464 VEKLSVSQVKQIAGRAGRFSAQHGSKEGFVTALHRSSL 501
Score = 74 (31.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 33/183 (18%), Positives = 72/183 (39%)
Query: 375 VSGSTEAIADRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVV--- 431
+S + + I F +L+ + L + E +F+K + + N F A K ++
Sbjct: 163 LSSNNDLIMQLFTQLLHKIFLQYRIENASFEKPKVDF-SNPAEWFPEARKMKRKIIMHVG 221
Query: 432 -----AEYAFALATKHCTRAVYTAPIKTISNQKYRDFSGK-FDVGLLTGDVSLRPEASCL 485
Y + Y P++ ++ + Y F+ + L+TG+ + P
Sbjct: 222 PTNSGKTYNSLIKLSKSKTGYYAGPLRLLAREIYEKFNSQGIGCNLITGE-EVVPSIDKY 280
Query: 486 IMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVII-MLPRHINIVLLSA 544
+ I + + + ++ + DE+ + D RG VW ++ +L I++ +
Sbjct: 281 GKVSGIASGTIEM-IPLHKKMDLCVIDEIQMIADPLRGSVWTNAVLGVLAHEIHLCGEES 339
Query: 545 TVP 547
VP
Sbjct: 340 AVP 342
>UNIPROTKB|Q59TB2 [details] [associations]
symbol:SUV3 "Putative uncharacterized protein SUV3"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0009060 "aerobic respiration"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036177
"filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0036187 "cell growth mode switching, budding to
filamentous" evidence=IMP] [GO:0044011 "single-species biofilm
formation on inanimate substrate" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0071467 "cellular response to pH" evidence=IMP]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 CGD:CAL0002663 GO:GO:0005524
GO:GO:0071216 GO:GO:0001410 GO:GO:0036180 GO:GO:0003676
GO:GO:0035690 GO:GO:0004386 GO:GO:0009060 GO:GO:0044011
InterPro:IPR014001 SMART:SM00487 GO:GO:0071467 GO:GO:0036177
GO:GO:0036187 eggNOG:COG0513 EMBL:AACQ01000142 EMBL:AACQ01000141
RefSeq:XP_712911.1 RefSeq:XP_712944.1 ProteinModelPortal:Q59TB2
STRING:Q59TB2 GeneID:3645451 GeneID:3645490 KEGG:cal:CaO19.11994
KEGG:cal:CaO19.4519 Uniprot:Q59TB2
Length = 720
Score = 104 (41.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 28/98 (28%), Positives = 44/98 (44%)
Query: 748 RRGIAIHHAGLLPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGRE 807
R + + + L P ++ F G VL +++ MG+N +VF + KF+G
Sbjct: 404 RLKVGVIYGALPPEIRSQEASKFNNGEYDVLVASDAIGMGLNLKINRIVFSGVNKFNGST 463
Query: 808 FRQLLPGEYTQMAGRAGRRGLD---KIGTVVVLCRDEI 842
+L + Q+AGRAGR K G V L R +
Sbjct: 464 VEKLSVSQVKQIAGRAGRFSAQHGSKEGFVTALHRSSL 501
Score = 74 (31.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 33/183 (18%), Positives = 72/183 (39%)
Query: 375 VSGSTEAIADRFHELVPDLALDFPFELDNFQKEAIYYLENGDSVFVAAHTSAGKTVV--- 431
+S + + I F +L+ + L + E +F+K + + N F A K ++
Sbjct: 163 LSSNNDLIMQLFTQLLHKIFLQYRIENASFEKPKVDF-SNPAEWFPEARKMKRKIIMHVG 221
Query: 432 -----AEYAFALATKHCTRAVYTAPIKTISNQKYRDFSGK-FDVGLLTGDVSLRPEASCL 485
Y + Y P++ ++ + Y F+ + L+TG+ + P
Sbjct: 222 PTNSGKTYNSLIKLSKSKTGYYAGPLRLLAREIYEKFNSQGIGCNLITGE-EVVPSIDKY 280
Query: 486 IMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVII-MLPRHINIVLLSA 544
+ I + + + ++ + DE+ + D RG VW ++ +L I++ +
Sbjct: 281 GKVSGIASGTIEM-IPLHKKMDLCVIDEIQMIADPLRGSVWTNAVLGVLAHEIHLCGEES 339
Query: 545 TVP 547
VP
Sbjct: 340 AVP 342
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1379 1364 0.00088 124 3 11 22 0.40 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 141
No. of states in DFA: 637 (68 KB)
Total size of DFA: 601 KB (2268 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 118.69u 0.10s 118.79t Elapsed: 00:00:06
Total cpu time: 118.74u 0.11s 118.85t Elapsed: 00:00:06
Start: Tue May 21 04:13:34 2013 End: Tue May 21 04:13:40 2013
WARNINGS ISSUED: 1