Your job contains 1 sequence.
>039494
MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN
RFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRTFIAKLNEKTAAASSS
AAPPMYFHHGLGSFPMQFRS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039494
(140 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2047304 - symbol:AGL61 "AGAMOUS-like 61" speci... 169 4.1e-19 2
TAIR|locus:2115420 - symbol:AT4G36590 species:3702 "Arabi... 166 1.1e-15 2
TAIR|locus:2032537 - symbol:AGL59 "AGAMOUS-like 59" speci... 178 1.0e-13 1
TAIR|locus:2025386 - symbol:AGL28 "AGAMOUS-like 28" speci... 148 2.4e-13 2
TAIR|locus:4010713489 - symbol:AGL64 "AGAMOUS-like 64" sp... 174 2.7e-13 1
TAIR|locus:2103415 - symbol:AGL91 "AGAMOUS-like 91" speci... 149 5.3e-13 2
TAIR|locus:2206320 - symbol:AGL23 "AGAMOUS-like 23" speci... 144 6.8e-13 2
TAIR|locus:2102990 - symbol:AGL57 "AGAMOUS-like 57" speci... 168 1.2e-12 1
TAIR|locus:2040819 - symbol:AGL29 "AGAMOUS-like 29" speci... 159 1.0e-11 1
TAIR|locus:2175188 - symbol:AGL62 "AGAMOUS-like 62" speci... 161 1.5e-11 1
TAIR|locus:2195798 - symbol:AT1G17310 species:3702 "Arabi... 154 3.5e-11 1
TAIR|locus:2043600 - symbol:AGL6 "AT2G45650" species:3702... 146 4.0e-10 1
TAIR|locus:2032543 - symbol:AGL58 "AGAMOUS-like 58" speci... 143 5.2e-10 1
UNIPROTKB|Q9ZS25 - symbol:gsqua1 "MADS-box protein, GSQUA... 116 4.2e-09 2
UNIPROTKB|D2T2G0 - symbol:gsqua2 "GSQUA2 protein" species... 119 4.3e-09 2
TAIR|locus:2029386 - symbol:AGL66 "AGAMOUS-like 66" speci... 120 4.9e-09 2
UNIPROTKB|Q9ATE3 - symbol:FBP28 "MADS-box transcription f... 132 8.2e-09 1
UNIPROTKB|Q43616 - symbol:fbp7 "Floral binding protein nu... 132 1.0e-08 1
TAIR|locus:2165386 - symbol:AGL72 "AGAMOUS-like 72" speci... 130 1.3e-08 1
POMBASE|SPAC11E3.06 - symbol:map1 "MADS-box transcription... 103 1.8e-08 2
TAIR|locus:2825756 - symbol:AGL97 "AGAMOUS-like 97" speci... 129 4.3e-08 1
UNIPROTKB|D2T2F8 - symbol:grcd4 "GRCD4 protein" species:1... 128 4.5e-08 1
TAIR|locus:2005522 - symbol:AGL20 "AT2G45660" species:370... 125 5.5e-08 1
TAIR|locus:2177125 - symbol:AGL15 "AGAMOUS-like 15" speci... 128 5.7e-08 1
TAIR|locus:2082613 - symbol:AGL18 "AGAMOUS-like 18" speci... 127 6.4e-08 1
UNIPROTKB|Q9ATE9 - symbol:FBP20 "MADS-box transcription f... 124 7.5e-08 1
UNIPROTKB|Q40882 - symbol:fbp11 "Fbp11 protein" species:4... 124 9.5e-08 1
UNIPROTKB|Q0J466 - symbol:MADS7 "MADS-box transcription f... 125 9.9e-08 1
UNIPROTKB|Q6EU39 - symbol:MADS6 "MADS-box transcription f... 125 1.0e-07 1
TAIR|locus:2173522 - symbol:AGL8 "AGAMOUS-like 8" species... 124 1.2e-07 1
TAIR|locus:2121924 - symbol:AGL24 "AT4G24540" species:370... 122 1.4e-07 1
TAIR|locus:2041233 - symbol:SVP "AT2G22540" species:3702 ... 123 1.5e-07 1
TAIR|locus:505006709 - symbol:AGL42 "AGAMOUS-like 42" spe... 121 1.5e-07 1
UNIPROTKB|Q6EUV6 - symbol:grcd3 "MADS domain protein" spe... 123 1.6e-07 1
TAIR|locus:2127213 - symbol:AGL19 "AGAMOUS-like 19" speci... 121 1.8e-07 1
UNIPROTKB|Q5K4R0 - symbol:MADS47 "MADS-box transcription ... 122 2.1e-07 1
UNIPROTKB|Q7XUN2 - symbol:MADS17 "MADS-box transcription ... 121 2.8e-07 1
UNIPROTKB|Q40885 - symbol:AG1 "Floral homeotic protein AG... 120 3.4e-07 1
UNIPROTKB|Q9FST1 - symbol:grcd1 "MADS box protein" specie... 120 3.4e-07 1
UNIPROTKB|Q9ZS30 - symbol:gaga1 "MADS-box protein, GAGA1"... 120 4.3e-07 1
UNIPROTKB|Q0DEB8 - symbol:MADS5 "MADS-box transcription f... 118 4.5e-07 1
TAIR|locus:2140578 - symbol:STK "AT4G09960" species:3702 ... 119 5.1e-07 1
UNIPROTKB|Q10PZ9 - symbol:MADS1 "MADS-box transcription f... 119 5.2e-07 1
TAIR|locus:2082618 - symbol:AGL16 "AGAMOUS-like 16" speci... 118 5.5e-07 1
TAIR|locus:2149264 - symbol:PI "PISTILLATA" species:3702 ... 116 5.6e-07 1
TAIR|locus:2028830 - symbol:CAL "CAULIFLOWER" species:370... 118 6.6e-07 1
TAIR|locus:2137070 - symbol:AGL14 "AGAMOUS-like 14" speci... 116 7.1e-07 1
TAIR|locus:2184118 - symbol:FLC "FLOWERING LOCUS C" speci... 114 7.5e-07 1
UNIPROTKB|Q9ZS29 - symbol:GAGA2 "MADS-box protein, GAGA2"... 117 7.7e-07 1
UNIPROTKB|O65874 - symbol:MTF1 "MADS-box transcription fa... 117 7.8e-07 1
TAIR|locus:2032372 - symbol:SEP3 "SEPALLATA3" species:370... 117 8.1e-07 1
TAIR|locus:2033273 - symbol:AP1 "AT1G69120" species:3702 ... 117 8.6e-07 1
TAIR|locus:2042182 - symbol:AGL44 "AGAMOUS-like 44" speci... 116 8.6e-07 1
TAIR|locus:2098826 - symbol:AGL13 "AGAMOUS-like 13" speci... 116 9.7e-07 1
TAIR|locus:2007186 - symbol:AGL94 "AGAMOUS-like 94" speci... 119 9.9e-07 1
TAIR|locus:2121070 - symbol:AGL21 "AT4G37940" species:370... 115 1.0e-06 1
TAIR|locus:2144355 - symbol:MAF5 "MADS AFFECTING FLOWERIN... 113 1.2e-06 1
TAIR|locus:2056760 - symbol:AGL30 "AGAMOUS-like 30" speci... 119 1.2e-06 1
UNIPROTKB|Q9ATE5 - symbol:FBP24 "MADS-box protein FBP24" ... 116 1.2e-06 1
UNIPROTKB|Q10CQ1 - symbol:MADS14 "MADS-box transcription ... 115 1.3e-06 1
UNIPROTKB|Q9ZS28 - symbol:gdef1 "MADs-box protein, GDEF1"... 114 1.3e-06 1
TAIR|locus:2025282 - symbol:MAF1 "MADS AFFECTING FLOWERIN... 112 1.3e-06 1
TAIR|locus:2066050 - symbol:AGL17 "AGAMOUS-like 17" speci... 114 1.3e-06 1
UNIPROTKB|Q0D4T4 - symbol:MADS18 "MADS-box transcription ... 115 1.3e-06 1
TAIR|locus:2184427 - symbol:AGL99 "AGAMOUS-like 99" speci... 117 1.4e-06 1
SGD|S000004646 - symbol:MCM1 "Transcription factor involv... 116 1.4e-06 1
TAIR|locus:2206016 - symbol:AGL55 "AGAMOUS-like 55" speci... 111 1.5e-06 1
TAIR|locus:2102871 - symbol:AGL79 "AGAMOUS-like 79" speci... 114 1.7e-06 1
UNIPROTKB|Q9XJ66 - symbol:MADS22 "MADS-box transcription ... 113 1.7e-06 1
UNIPROTKB|Q9ZS27 - symbol:gdef2 "MADS-box protein, GDEF2"... 113 1.7e-06 1
DICTYBASE|DDB_G0281387 - symbol:srfA "SRF-related protein... 105 1.8e-06 2
UNIPROTKB|Q03378 - symbol:GLO "Floral homeotic protein GL... 112 1.9e-06 1
UNIPROTKB|Q9ATF2 - symbol:FBP5 "MADS-box transcription fa... 113 2.2e-06 1
SGD|S000004645 - symbol:ARG80 "Transcription factor invol... 108 2.6e-06 1
TAIR|locus:2206081 - symbol:AGL56 "AGAMOUS-like-56" speci... 109 3.3e-06 1
TAIR|locus:2030621 - symbol:AGL104 "AGAMOUS-like 104" spe... 114 3.3e-06 1
UNIPROTKB|Q6Q9I2 - symbol:MADS15 "MADS-box transcription ... 112 3.4e-06 1
TAIR|locus:2029411 - symbol:AGL67 "AGAMOUS-like 67" speci... 111 3.9e-06 1
TAIR|locus:2177749 - symbol:AGL31 "AGAMOUS-like 31" speci... 108 3.9e-06 1
TAIR|locus:2044259 - symbol:SEP4 "SEPALLATA 4" species:37... 111 4.1e-06 1
TAIR|locus:2034949 - symbol:AGL65 "AGAMOUS-like 65" speci... 113 5.5e-06 1
UNIPROTKB|Q6EUV7 - symbol:grcd2 "MADS domain protein" spe... 109 6.2e-06 1
UNIPROTKB|D2T2F9 - symbol:grcd5 "GRCD5 protein" species:1... 109 6.5e-06 1
UNIPROTKB|Q9ZS26 - symbol:gglo1 "MADS-box protein, GGLO1"... 106 6.9e-06 1
UNIPROTKB|Q2QW53 - symbol:MADS13 "MADS-box transcription ... 109 7.6e-06 1
TAIR|locus:2193922 - symbol:AT1G72350 species:3702 "Arabi... 107 7.9e-06 1
CGD|CAL0001975 - symbol:MCM1 species:5476 "Candida albica... 108 9.1e-06 1
UNIPROTKB|Q5AFP3 - symbol:MCM1 "Transcription factor of m... 108 9.1e-06 1
UNIPROTKB|Q9ATF1 - symbol:FBP9 "MADS-box transcription fa... 107 1.0e-05 1
TAIR|locus:2166766 - symbol:TT16 "TRANSPARENT TESTA16" sp... 107 1.1e-05 1
UNIPROTKB|Q03489 - symbol:FBP2 "Agamous-like MADS-box pro... 106 1.3e-05 1
TAIR|locus:2096164 - symbol:AP3 "APETALA 3" species:3702 ... 105 1.5e-05 1
TAIR|locus:2143261 - symbol:SEP1 "SEPALLATA1" species:370... 106 1.5e-05 1
TAIR|locus:2202420 - symbol:AGL102 "AGAMOUS-like 102" spe... 102 1.5e-05 1
TAIR|locus:2076522 - symbol:SEP2 "SEPALLATA 2" species:37... 104 2.3e-05 1
TAIR|locus:2144345 - symbol:MAF3 "MADS AFFECTING FLOWERIN... 101 2.6e-05 1
WB|WBGene00006844 - symbol:unc-120 species:6239 "Caenorha... 104 3.9e-05 1
TAIR|locus:2057741 - symbol:AGL33 "AGAMOUS-like 33" speci... 96 5.0e-05 1
DICTYBASE|DDB_G0282835 - symbol:srfB "putative MADS-box t... 104 6.9e-05 1
TAIR|locus:2824536 - symbol:AGL12 "AGAMOUS-like 12" speci... 98 7.1e-05 1
WARNING: Descriptions of 21 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2047304 [details] [associations]
symbol:AGL61 "AGAMOUS-like 61" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009559 "embryo sac central cell
differentiation" evidence=IMP] [GO:0043078 "polar nucleus"
evidence=IDA] [GO:0009612 "response to mechanical stimulus"
evidence=RCA] [GO:0019722 "calcium-mediated signaling"
evidence=RCA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:Q02078 EMBL:AC006585 EMBL:DQ056542
EMBL:EU836691 IPI:IPI00545091 PIR:B84641 RefSeq:NP_850058.1
UniGene:At.52900 ProteinModelPortal:Q4PSU4 SMR:Q4PSU4 IntAct:Q4PSU4
STRING:Q4PSU4 EnsemblPlants:AT2G24840.1 GeneID:817021
KEGG:ath:AT2G24840 GeneFarm:3717 TAIR:At2g24840 eggNOG:NOG244091
HOGENOM:HOG000238700 InParanoid:Q4PSU4 OMA:AASCELN PhylomeDB:Q4PSU4
ProtClustDB:CLSN2918089 ArrayExpress:Q4PSU4 Genevestigator:Q4PSU4
GO:GO:0043078 GO:GO:0009559 Uniprot:Q4PSU4
Length = 264
Score = 169 (64.5 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 33/66 (50%), Positives = 48/66 (72%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
M KI+ E R +TFSKR +G+++K SEL TL + I +VFS + KPFSFG+PS+E+V +
Sbjct: 69 MVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLD 128
Query: 61 RFLGLN 66
R++ N
Sbjct: 129 RYVSRN 134
Score = 74 (31.1 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 68 QMRKR--KETQPRWWETPVYEFNHQELLQMDATIDNLSRTFIAKL 110
+MRK + + WWE PV E N +L +M ++ L +T + +
Sbjct: 177 EMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNM 221
>TAIR|locus:2115420 [details] [associations]
symbol:AT4G36590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS50066 SMART:SM00432 GO:GO:0005829 GO:GO:0005634
EMBL:CP002687 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:Q02078 EMBL:AL161589 EMBL:Z99708 EMBL:AY086178
EMBL:AY141234 EMBL:DQ446902 IPI:IPI00520544 PIR:A85432
RefSeq:NP_195377.1 UniGene:At.31315 ProteinModelPortal:O23222
SMR:O23222 IntAct:O23222 STRING:O23222 PRIDE:O23222
EnsemblPlants:AT4G36590.1 GeneID:829811 KEGG:ath:AT4G36590
TAIR:At4g36590 InParanoid:O23222 OMA:DLDMNET PhylomeDB:O23222
ProtClustDB:CLSN2685561 Genevestigator:O23222 Uniprot:O23222
Length = 248
Score = 166 (63.5 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
MKK+ENE +TFSKR G+++K SEL TL+ + I +VFS GK FSFG+PS++ + +
Sbjct: 13 MKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFSFGHPSVQELIH 72
Query: 61 RFLGLN 66
RF N
Sbjct: 73 RFSNPN 78
Score = 44 (20.5 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 6/44 (13%), Positives = 24/44 (54%)
Query: 69 MRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRTFIAKLNE 112
+++ +E W+E V + + E Q+ + + ++ + + ++++
Sbjct: 129 LKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLVREMSQ 172
>TAIR|locus:2032537 [details] [associations]
symbol:AGL59 "AGAMOUS-like 59" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746
HOGENOM:HOG000238700 eggNOG:KOG0014 EMBL:AC010155
ProtClustDB:CLSN2679626 IPI:IPI00522494 PIR:G86410
RefSeq:NP_174168.1 UniGene:At.51805 ProteinModelPortal:Q9SGP4
SMR:Q9SGP4 EnsemblPlants:AT1G28460.1 GeneID:839745
KEGG:ath:AT1G28460 TAIR:At1g28460 InParanoid:Q9SGP4 OMA:CEQAASR
PhylomeDB:Q9SGP4 Genevestigator:Q9SGP4 Uniprot:Q9SGP4
Length = 182
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+KKIE ++GR +TFSKR +GIY K+SEL L +A + +S SGKP++FG+PS +AVA
Sbjct: 14 IKKIEKDEGRSVTFSKRLNGIYTKISELSILCGVEVAFIGYSCSGKPYTFGSPSFQAVAE 73
Query: 61 RFL 63
RFL
Sbjct: 74 RFL 76
>TAIR|locus:2025386 [details] [associations]
symbol:AGL28 "AGAMOUS-like 28" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 EMBL:AC061957 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
ProtClustDB:CLSN2679619 EMBL:AY141231 EMBL:DQ446218 EMBL:AB493420
IPI:IPI00522692 PIR:H86145 RefSeq:NP_171660.1 UniGene:At.42643
ProteinModelPortal:Q9LMM8 SMR:Q9LMM8 IntAct:Q9LMM8 STRING:Q9LMM8
EnsemblPlants:AT1G01530.1 GeneID:837142 KEGG:ath:AT1G01530
TAIR:At1g01530 InParanoid:Q9LMM8 OMA:KMTNESN PhylomeDB:Q9LMM8
ArrayExpress:Q9LMM8 Genevestigator:Q9LMM8 Uniprot:Q9LMM8
Length = 247
Score = 148 (57.2 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 3 KIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVANRF 62
K+ NE +TFSKR SG+++K SEL TL + IA +VFS SGK +SFG+P++ + +
Sbjct: 15 KMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSFGHPNVNKLLDHS 74
Query: 63 LG 64
LG
Sbjct: 75 LG 76
Score = 42 (19.8 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 70 RKRKETQPRWWETPVYEFNHQELLQMDATIDNLSR 104
R+ K+ + +WW E N + M ++ L +
Sbjct: 124 RENKDAE-KWWRNSPTELNLAQSTSMKCDLEALKK 157
>TAIR|locus:4010713489 [details] [associations]
symbol:AGL64 "AGAMOUS-like 64" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066
SMART:SM00432 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
HSSP:P11831 HOGENOM:HOG000238700 EMBL:AY141244 IPI:IPI00852269
RefSeq:NP_001077625.1 UniGene:At.40641 ProteinModelPortal:Q7XJK9
SMR:Q7XJK9 IntAct:Q7XJK9 STRING:Q7XJK9 EnsemblPlants:AT1G29962.1
GeneID:5007741 KEGG:ath:AT1G29962 TAIR:At1g29962 eggNOG:NOG321251
OMA:NEDAWWK PhylomeDB:Q7XJK9 ProtClustDB:CLSN2679626
Genevestigator:Q7XJK9 Uniprot:Q7XJK9
Length = 185
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+KKIE ++ RL+T SKR +GIY K+SEL L + +A L +S SGKP++FG+PS +AVA
Sbjct: 14 IKKIEKDEDRLVTLSKRRNGIYTKLSELSILCGAEVAFLGYSCSGKPYTFGSPSFQAVAE 73
Query: 61 RFL 63
RFL
Sbjct: 74 RFL 76
>TAIR|locus:2103415 [details] [associations]
symbol:AGL91 "AGAMOUS-like 91" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC036106 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11746 HOGENOM:HOG000238700
ProtClustDB:CLSN2683539 EMBL:DQ056634 IPI:IPI00548671
RefSeq:NP_187320.1 UniGene:At.64985 ProteinModelPortal:Q9C836
SMR:Q9C836 EnsemblPlants:AT3G66656.1 GeneID:819848
KEGG:ath:AT3G66656 TAIR:At3g66656 InParanoid:Q9C836 OMA:QEKKICK
PhylomeDB:Q9C836 Genevestigator:Q9C836 Uniprot:Q9C836
Length = 178
Score = 149 (57.5 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 26/62 (41%), Positives = 43/62 (69%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
M+K+++ + + +TFSKR G+++K SEL TL + + +VFS KP+SFG P+ + +A
Sbjct: 8 MEKVQDTNTKQVTFSKRRLGLFKKASELATLCNAEVGIVVFSPGNKPYSFGKPNFDVIAE 67
Query: 61 RF 62
RF
Sbjct: 68 RF 69
Score = 35 (17.4 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 83 PVYEFNHQELLQMDATIDNLS 103
P+ E +EL + +A I +S
Sbjct: 135 PIEELTLEELKEFEAKIKKIS 155
>TAIR|locus:2206320 [details] [associations]
symbol:AGL23 "AGAMOUS-like 23" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009553 "embryo
sac development" evidence=IMP] [GO:0009658 "chloroplast
organization" evidence=IMP] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004512 GO:GO:0009658 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:Q02078 HOGENOM:HOG000238700 GO:GO:0009553
EMBL:AY141230 IPI:IPI00536845 PIR:T02359 RefSeq:NP_176715.1
UniGene:At.35891 ProteinModelPortal:O80807 SMR:O80807 IntAct:O80807
STRING:O80807 EnsemblPlants:AT1G65360.1 GeneID:842846
KEGG:ath:AT1G65360 TAIR:At1g65360 InParanoid:O80807 OMA:QNERENE
PhylomeDB:O80807 ProtClustDB:CLSN2679619 ArrayExpress:O80807
Genevestigator:O80807 Uniprot:O80807
Length = 226
Score = 144 (55.7 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 3 KIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVANRF 62
K+ E +TFSKR +G+++K SE TL + IA +VFS +GK FSFG+P+++ + + F
Sbjct: 15 KMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFSFGHPNVDVLLDHF 74
Query: 63 LG 64
G
Sbjct: 75 RG 76
Score = 39 (18.8 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 12/59 (20%), Positives = 19/59 (32%)
Query: 68 QMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRTFIAKLNEKTXXXXXXXXPPMY 126
Q + E WW E N + M + +L + ++EK P Y
Sbjct: 121 QNERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKI----VDEKAIQLIHQTNPNFY 175
>TAIR|locus:2102990 [details] [associations]
symbol:AGL57 "AGAMOUS-like 57" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11831
HOGENOM:HOG000238700 EMBL:AC016829 EMBL:DQ056586 IPI:IPI00531240
RefSeq:NP_187060.1 UniGene:At.53175 ProteinModelPortal:Q9M8W6
SMR:Q9M8W6 IntAct:Q9M8W6 PRIDE:Q9M8W6 EnsemblPlants:AT3G04100.1
GeneID:819565 KEGG:ath:AT3G04100 TAIR:At3g04100 InParanoid:Q9M8W6
OMA:VEVAFLI PhylomeDB:Q9M8W6 ProtClustDB:CLSN2913500
ArrayExpress:Q9M8W6 Genevestigator:Q9M8W6 Uniprot:Q9M8W6
Length = 207
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 35/78 (44%), Positives = 55/78 (70%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
MKK+EN R+ITFSKR +GI++K++ELV + +A L+FSQ KP++F +PS++ VA+
Sbjct: 20 MKKVENYGDRMITFSKRKTGIFKKMNELVAMCDVEVAFLIFSQPKKPYTFAHPSMKKVAD 79
Query: 61 RFLGLNCQMR-KRKETQP 77
R + Q +R +T+P
Sbjct: 80 RLKNPSRQEPLERDDTRP 97
>TAIR|locus:2040819 [details] [associations]
symbol:AGL29 "AGAMOUS-like 29" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 EMBL:AC004077
EMBL:AC004481 EMBL:DQ446598 IPI:IPI00526479 PIR:T02331
RefSeq:NP_180991.1 UniGene:At.37804 ProteinModelPortal:O64703
SMR:O64703 EnsemblPlants:AT2G34440.1 GeneID:818007
KEGG:ath:AT2G34440 TAIR:At2g34440 InParanoid:O64703 OMA:QASSCLM
PhylomeDB:O64703 ProtClustDB:CLSN2683539 ArrayExpress:O64703
Genevestigator:O64703 Uniprot:O64703
Length = 172
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 28/63 (44%), Positives = 47/63 (74%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
M+ +++ + R +TFSKR +G+++K SEL TL + + +VFS GKPFS+G P++++VA
Sbjct: 8 MEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPNLDSVAE 67
Query: 61 RFL 63
RF+
Sbjct: 68 RFM 70
>TAIR|locus:2175188 [details] [associations]
symbol:AGL62 "AGAMOUS-like 62" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009960 "endosperm
development" evidence=IMP] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
HOGENOM:HOG000238700 EMBL:AY141236 EMBL:EU493093 EMBL:AB011483
IPI:IPI00517886 IPI:IPI00520610 RefSeq:NP_200852.1 UniGene:At.29160
ProteinModelPortal:Q9FKK2 SMR:Q9FKK2 IntAct:Q9FKK2 STRING:Q9FKK2
EnsemblPlants:AT5G60440.1 GeneID:836165 KEGG:ath:AT5G60440
GeneFarm:3728 TAIR:At5g60440 eggNOG:NOG311592 InParanoid:Q9FKK2
OMA:NISEYEH PhylomeDB:Q9FKK2 ProtClustDB:CLSN2916398
Genevestigator:Q9FKK2 GO:GO:0009960 Uniprot:Q9FKK2
Length = 299
Score = 161 (61.7 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 41/120 (34%), Positives = 70/120 (58%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
M K++NE +TFSKR SG+++K SEL TL + +A +VFS K FSFG+P++++V +
Sbjct: 13 MVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVID 72
Query: 61 RFLGLNCQMRKRKETQPRWWETP----VYEFNHQELLQMDATIDNLSRTF--IAKLNEKT 114
RF+ N + + + ET V + N+ L Q+ + ++ + + + K+ EKT
Sbjct: 73 RFINNN-PLPPHQHNNMQLRETRRNSIVQDLNNH-LTQVLSQLETEKKKYDELKKIREKT 130
>TAIR|locus:2195798 [details] [associations]
symbol:AT1G17310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746 EMBL:AC026479
ProtClustDB:CLSN2679559 EMBL:AY141240 EMBL:DQ446258 EMBL:BT025284
EMBL:AB493462 IPI:IPI00524771 PIR:E86309 RefSeq:NP_173175.1
UniGene:At.41842 ProteinModelPortal:Q9LN16 SMR:Q9LN16
EnsemblPlants:AT1G17310.1 GeneID:838303 KEGG:ath:AT1G17310
TAIR:At1g17310 InParanoid:Q9LN16 OMA:IVAMGND PhylomeDB:Q9LN16
ArrayExpress:Q9LN16 Genevestigator:Q9LN16 Uniprot:Q9LN16
Length = 217
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 39/126 (30%), Positives = 70/126 (55%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+KKIE E R +TFSKR G+++K +EL LT + IA + FS+ + + FG+ ++A+ +
Sbjct: 54 IKKIEEETKRQVTFSKRRRGLFKKSAELSVLTGAKIAVITFSKCDRIYRFGH--VDALID 111
Query: 61 RFL--------GLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATI----DNLSRTFIA 108
++L G + +E++ WWE PV +EL + A + +N+ + +A
Sbjct: 112 KYLRKSPVKLEGYSGDNAADEESRRPWWERPVESVPEEELEEYMAALSMLRENIGKKIVA 171
Query: 109 KLNEKT 114
N++T
Sbjct: 172 MGNDRT 177
>TAIR|locus:2043600 [details] [associations]
symbol:AGL6 "AT2G45650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0048437 "floral organ development" evidence=IMP] [GO:0009911
"positive regulation of flower development" evidence=IMP]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0030154 EMBL:CP002685 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009911 eggNOG:COG5068
GO:GO:0010228 SUPFAM:SSF55455 EMBL:M55554 EMBL:AC003680
IPI:IPI00531522 PIR:F39534 RefSeq:NP_182089.1 UniGene:At.512
ProteinModelPortal:P29386 SMR:P29386 IntAct:P29386 STRING:P29386
EnsemblPlants:AT2G45650.1 GeneID:819173 KEGG:ath:AT2G45650
GeneFarm:3546 TAIR:At2g45650 InParanoid:P29386 KO:K09264
OMA:KERQLGD PhylomeDB:P29386 ProtClustDB:CLSN2913049
Genevestigator:P29386 GO:GO:0048437 Uniprot:P29386
Length = 252
Score = 146 (56.5 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 32/82 (39%), Positives = 47/82 (57%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
MK+IEN+ R +TFSKR +G+ +K EL L + +A ++FS GK + FG+ IE+
Sbjct: 8 MKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGIESTIE 67
Query: 61 RFLGL-NCQMRKRK--ETQPRW 79
R+ NC + K ET W
Sbjct: 68 RYNRCYNCSLSNNKPEETTQSW 89
>TAIR|locus:2032543 [details] [associations]
symbol:AGL58 "AGAMOUS-like 58" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746
HOGENOM:HOG000238700 eggNOG:KOG0014 EMBL:AC010155
ProtClustDB:CLSN2679626 IPI:IPI00519993 RefSeq:NP_174167.1
UniGene:At.51804 ProteinModelPortal:Q9SGP3 SMR:Q9SGP3 PRIDE:Q9SGP3
EnsemblPlants:AT1G28450.1 GeneID:839743 KEGG:ath:AT1G28450
TAIR:At1g28450 InParanoid:Q9SGP3 PhylomeDB:Q9SGP3
Genevestigator:Q9SGP3 Uniprot:Q9SGP3
Length = 185
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+KKIE ++ R +T SKR + IY + EL L +A + +S SGKP++FG+PS +AV
Sbjct: 14 IKKIEKDEDRSVTLSKRLNAIYTMIIELSILCGVEVAFIGYSCSGKPYTFGSPSFQAVVE 73
Query: 61 RFL 63
RFL
Sbjct: 74 RFL 76
>UNIPROTKB|Q9ZS25 [details] [associations]
symbol:gsqua1 "MADS-box protein, GSQUA1" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AJ009727 ProteinModelPortal:Q9ZS25 IntAct:Q9ZS25
Uniprot:Q9ZS25
Length = 210
Score = 116 (45.9 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR G+ +K E+ L + +A +VFS GK F + S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRGGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMENIL 67
Query: 60 NRF 62
+R+
Sbjct: 68 DRY 70
Score = 34 (17.0 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEFNHQELL 93
N L N + +++ TQ WE Y N LL
Sbjct: 165 NNTLIKNIKEKEKTITQKAQWEPHNYGPNTTPLL 198
>UNIPROTKB|D2T2G0 [details] [associations]
symbol:gsqua2 "GSQUA2 protein" species:18101 "Gerbera
hybrid cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:FN298387 IntAct:D2T2G0
Uniprot:D2T2G0
Length = 238
Score = 119 (46.9 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFG-NPSIEAVA 59
+K+IEN+ R +TFSKR +G+ +K E+ L + +A +VFS GK F + + S++A+
Sbjct: 8 LKRIENKISRQVTFSKRRTGLLKKAHEISVLCDADVALIVFSTKGKLFEYSTHSSMDAIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
Score = 34 (17.0 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 5/7 (71%), Positives = 5/7 (71%)
Query: 123 PPMYFHH 129
PP FHH
Sbjct: 229 PPWLFHH 235
>TAIR|locus:2029386 [details] [associations]
symbol:AGL66 "AGAMOUS-like 66" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0009827
"plant-type cell wall modification" evidence=RCA] [GO:0009860
"pollen tube growth" evidence=RCA] [GO:0010584 "pollen exine
formation" evidence=RCA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 GO:GO:0009555 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 EMBL:DQ446441
IPI:IPI00529104 RefSeq:NP_177921.2 UniGene:At.34354
ProteinModelPortal:Q1PFC2 SMR:Q1PFC2 STRING:Q1PFC2
EnsemblPlants:AT1G77980.1 GeneID:844133 KEGG:ath:AT1G77980
TAIR:At1g77980 InParanoid:Q1PFC2 OMA:TMEEYET PhylomeDB:Q1PFC2
ProtClustDB:CLSN2679793 ArrayExpress:Q1PFC2 Genevestigator:Q1PFC2
Uniprot:Q1PFC2
Length = 332
Score = 120 (47.3 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 35/94 (37%), Positives = 50/94 (53%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSF-GNPSIEAVA 59
+K+IEN R +TFSKR +G+ +K EL L IA L+FS S + F G IE V
Sbjct: 8 IKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALLMFSPSDRLSLFSGKTRIEDVF 67
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEFNHQELL 93
+R++ L+ Q R+ P P +F +E L
Sbjct: 68 SRYINLSDQERENALVFPDQSRRP--DFQSKEYL 99
Score = 39 (18.8 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 8/21 (38%), Positives = 8/21 (38%)
Query: 111 NEKTXXXXXXXXPPMYFHHGL 131
N T PPM HGL
Sbjct: 275 NSTTAHNPSTLFPPMQHQHGL 295
>UNIPROTKB|Q9ATE3 [details] [associations]
symbol:FBP28 "MADS-box transcription factor FBP28"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AF335244 ProteinModelPortal:Q9ATE3 IntAct:Q9ATE3
Uniprot:Q9ATE3
Length = 215
Score = 132 (51.5 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 30/97 (30%), Positives = 54/97 (55%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
M++IEN R +TFSKR +G+ +K EL L + ++ ++FS GK + F + S++ +
Sbjct: 8 MRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSTRGKLYEFSSSSMQEIIE 67
Query: 61 RFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDA 97
R+ R+ ++ E P E N+ + L++DA
Sbjct: 68 RY---------RRHSEDVQGEKPAVEQNNMQNLKLDA 95
>UNIPROTKB|Q43616 [details] [associations]
symbol:fbp7 "Floral binding protein number 7" species:4102
"Petunia x hybrida" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 UniProt:Q43616 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 EMBL:X81651
ProteinModelPortal:Q43616 IntAct:Q43616
Length = 225
Score = 132 (51.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN R +TF KR +G+ +K EL L + IA +VFS G+ + + N +I A+ +
Sbjct: 8 IKRIENNTNRQVTFCKRRNGLLKKAYELSVLCEAEIALIVFSTRGRVYEYSNNNIRAIID 67
Query: 61 RFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRTFIAK 109
R+ + TQ Y+ ++L Q I N +R + +
Sbjct: 68 RYKKATVETSNAFTTQEL--NAQFYQQESKKLRQQIQLIQNSNRHLVGE 114
>TAIR|locus:2165386 [details] [associations]
symbol:AGL72 "AGAMOUS-like 72" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 EMBL:AB010074 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000155301 SUPFAM:SSF55455
HSSP:Q02078 GO:GO:0009909 EMBL:AB025623 EMBL:AY141221
IPI:IPI00532403 RefSeq:NP_199999.1 UniGene:At.29656
ProteinModelPortal:Q9FLH5 SMR:Q9FLH5 IntAct:Q9FLH5
EnsemblPlants:AT5G51860.1 GeneID:835261 KEGG:ath:AT5G51860
TAIR:At5g51860 InParanoid:Q9FLH5 OMA:YEFASSD PhylomeDB:Q9FLH5
ProtClustDB:CLSN2687435 ArrayExpress:Q9FLH5 Genevestigator:Q9FLH5
Uniprot:Q9FLH5
Length = 211
Score = 130 (50.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+KKIEN R +TFSKR SG+++K EL L + +A ++FSQ G+ + F + I
Sbjct: 8 IKKIENVTSRQVTFSKRRSGLFKKAHELSVLCDAQVAAMIFSQKGRLYEFASSDIRNTIK 67
Query: 61 RF 62
R+
Sbjct: 68 RY 69
>POMBASE|SPAC11E3.06 [details] [associations]
symbol:map1 "MADS-box transcription factor Map1"
species:4896 "Schizosaccharomyces pombe" [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=NAS] [GO:0000982 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0001197 "positive regulation of
mating-type specific transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IC;IDA] [GO:0007532 "regulation of mating-type
specific transcription, DNA-dependent" evidence=IMP] [GO:0010514
"induction of conjugation with cellular fusion" evidence=IMP]
[GO:0036003 "positive regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IMP]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0075296 "positive regulation of ascospore formation"
evidence=IMP] [GO:0090028 "positive regulation of
pheromone-dependent signal transduction involved in conjugation
with cellular fusion" evidence=IMP] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
PomBase:SPAC11E3.06 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0000978 GO:GO:0000982
eggNOG:COG5068 SUPFAM:SSF55455 OrthoDB:EOG4P2TC4 GO:GO:0010514
GO:GO:0090028 GO:GO:0036003 EMBL:D78483 EMBL:L77973 PIR:T43225
PIR:T43415 RefSeq:NP_594931.1 ProteinModelPortal:P78926
EnsemblFungi:SPAC11E3.06.1 GeneID:2541765 KEGG:spo:SPAC11E3.06
NextBio:20802856 GO:GO:0075296 GO:GO:0001197 Uniprot:P78926
Length = 398
Score = 103 (41.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 4 IENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAV 58
+E+ R TF+KR +GI++K +EL LT S + LV S++G +F P +E V
Sbjct: 28 LEDRQKRQNTFTKRKAGIFKKANELALLTGSEVMVLVVSETGLVHTFSTPKLENV 82
Score = 54 (24.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 88 NHQELLQMDATIDNLSRTFIAKLNEKTXXXXXXXXPPMYFHHGL 131
+H E L + IDN S+T ++ K + F HGL
Sbjct: 141 SHIENLNFFSDIDNFSKTSAEEIASKLFSSVSPTHETLQFDHGL 184
>TAIR|locus:2825756 [details] [associations]
symbol:AGL97 "AGAMOUS-like 97" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
eggNOG:KOG0014 EMBL:AC083835 EMBL:AB493500 IPI:IPI00539277
PIR:E96511 RefSeq:NP_175144.1 UniGene:At.65984
ProteinModelPortal:Q9C633 SMR:Q9C633 IntAct:Q9C633 STRING:Q9C633
EnsemblPlants:AT1G46408.1 GeneID:841112 KEGG:ath:AT1G46408
TAIR:At1g46408 HOGENOM:HOG000033848 PhylomeDB:Q9C633
ProtClustDB:CLSN2681906 Genevestigator:Q9C633 Uniprot:Q9C633
Length = 266
Score = 129 (50.5 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 38/116 (32%), Positives = 61/116 (52%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLT---VSAIARLVFSQSGKPF-SFGNPSIE 56
++KI+N++ R ++FSKR G+Y K SEL L+ ++ IA V S S F SFG+ S++
Sbjct: 10 IEKIQNKNPRAVSFSKRRKGLYSKASELCLLSDAEIAIIATPVSSNSNAAFYSFGHSSVD 69
Query: 57 AVANRFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRTFIAKLNE 112
V FL +R + WWE + L ++ +D++S T + L E
Sbjct: 70 NVVAAFLA-----NQRPCDERFWWEDESL-LKSENLEELREAMDSMS-TMLRDLKE 118
>UNIPROTKB|D2T2F8 [details] [associations]
symbol:grcd4 "GRCD4 protein" species:18101 "Gerbera hybrid
cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:FN297860 IntAct:D2T2F8
Uniprot:D2T2F8
Length = 249
Score = 128 (50.1 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 32/106 (30%), Positives = 60/106 (56%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSF-GNPSIEAVA 59
+K+IEN+ R +TF+KR +G+ +K EL L + +A ++FS GK + F + S+
Sbjct: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTL 67
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRT 105
++ +C K +QP E+ ++N+ E L++ A ++ L R+
Sbjct: 68 EKYH--SCSYGSLKASQPEN-ES---QYNYHEYLRLKARVEVLQRS 107
>TAIR|locus:2005522 [details] [associations]
symbol:AGL20 "AT2G45660" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009911 "positive regulation of
flower development" evidence=IMP] [GO:0009908 "flower development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0009409 "response to cold" evidence=IEP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEP]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:0010077
"maintenance of inflorescence meristem identity" evidence=IGI]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0043481
"anthocyanin accumulation in tissues in response to UV light"
evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009409 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 GO:GO:0000060 GO:GO:0009911
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0009908
GO:GO:0010077 EMBL:AC003680 EMBL:AY007726 EMBL:AF385731
EMBL:AY093967 IPI:IPI00527426 PIR:T00879 RefSeq:NP_182090.1
UniGene:At.25546 ProteinModelPortal:O64645 SMR:O64645 IntAct:O64645
STRING:O64645 EnsemblPlants:AT2G45660.1 GeneID:819174
KEGG:ath:AT2G45660 GeneFarm:3500 TAIR:At2g45660 InParanoid:O64645
OMA:YEFASSN PhylomeDB:O64645 ProtClustDB:CLSN2683366
Genevestigator:O64645 GermOnline:AT2G45660 Uniprot:O64645
Length = 214
Score = 125 (49.1 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
MK+IEN R +TFSKR +G+ +K EL L + ++ ++FS GK + F + +++ +
Sbjct: 8 MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTID 67
Query: 61 RFLGLNCQMRKRKETQPRWWETPVYEFNHQEL 92
R+L + T+ R PV E N Q L
Sbjct: 68 RYL---------RHTKDRVSTKPVSEENMQHL 90
>TAIR|locus:2177125 [details] [associations]
symbol:AGL15 "AGAMOUS-like 15" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA;IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA;NAS;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA;TAS]
[GO:0060862 "negative regulation of floral organ abscission"
evidence=IMP] [GO:0010047 "fruit dehiscence" evidence=IMP]
[GO:0060867 "fruit abscission" evidence=IMP] [GO:2000692 "negative
regulation of seed maturation" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI;IDA]
[GO:0071365 "cellular response to auxin stimulus" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048577
"negative regulation of short-day photoperiodism, flowering"
evidence=IMP] [GO:0010262 "somatic embryogenesis" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IDA;TAS] [GO:0045487 "gibberellin catabolic
process" evidence=TAS] [GO:0006944 "cellular membrane fusion"
evidence=RCA] [GO:0009556 "microsporogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0052543 "callose
deposition in cell wall" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0045893 GO:GO:0042803 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0010047 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:U22528 EMBL:AB011484
EMBL:AB005230 EMBL:U20185 IPI:IPI00536362 PIR:S71200
RefSeq:NP_196883.1 UniGene:At.28675 ProteinModelPortal:Q38847
SMR:Q38847 IntAct:Q38847 STRING:Q38847 EnsemblPlants:AT5G13790.1
GeneID:831224 KEGG:ath:AT5G13790 GeneFarm:3513 TAIR:At5g13790
InParanoid:Q38847 OMA:LYHALIT PhylomeDB:Q38847
ProtClustDB:CLSN2916614 Genevestigator:Q38847 GermOnline:AT5G13790
GO:GO:0071365 GO:GO:0009908 GO:GO:0060867 GO:GO:0045487
GO:GO:0060862 GO:GO:0009910 GO:GO:2000692 GO:GO:0048577
GO:GO:0010262 Uniprot:Q38847
Length = 268
Score = 128 (50.1 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN + R +TFSKR SG+ +K EL L + +A +VFS+SGK F + + ++ +
Sbjct: 8 IKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTGMKQTLS 67
Query: 61 RF 62
R+
Sbjct: 68 RY 69
>TAIR|locus:2082613 [details] [associations]
symbol:AGL18 "AGAMOUS-like 18" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0048577 "negative regulation of
short-day photoperiodism, flowering" evidence=IMP] [GO:0009555
"pollen development" evidence=IMP] [GO:0010048 "vernalization
response" evidence=RCA] [GO:0043481 "anthocyanin accumulation in
tissues in response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL137080 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0009908 GO:GO:0009910
GO:GO:0048577 HSSP:Q02078 EMBL:AF312663 EMBL:AK220679 EMBL:AK222220
EMBL:BT025774 EMBL:AY087639 IPI:IPI00519883 IPI:IPI00530471
IPI:IPI01027882 PIR:T45817 RefSeq:NP_191298.1 RefSeq:NP_974450.1
UniGene:At.24026 ProteinModelPortal:Q9M2K8 SMR:Q9M2K8 PRIDE:Q9M2K8
EnsemblPlants:AT3G57390.1 GeneID:824906 KEGG:ath:AT3G57390
GeneFarm:3514 TAIR:At3g57390 InParanoid:Q9M2K8 OMA:TASTEHK
PhylomeDB:Q9M2K8 ProtClustDB:CLSN2684553 Genevestigator:Q9M2K8
Uniprot:Q9M2K8
Length = 256
Score = 127 (49.8 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+KKIEN + R +TFSKR +G+ +K EL L + +A ++FS +GK + F + +E + +
Sbjct: 8 IKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSVCMEQILS 67
Query: 61 RF 62
R+
Sbjct: 68 RY 69
>UNIPROTKB|Q9ATE9 [details] [associations]
symbol:FBP20 "MADS-box transcription factor FBP20"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746 EMBL:AF335238
ProteinModelPortal:Q9ATE9 IntAct:Q9ATE9 Uniprot:Q9ATE9
Length = 216
Score = 124 (48.7 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
M++IEN R +TFSKR +G+ +K EL L + + ++FS GK + F + S++ +
Sbjct: 8 MRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAQVGLVIFSPRGKQYEFSSSSMQEIIE 67
Query: 61 RFLG 64
R+ G
Sbjct: 68 RYKG 71
>UNIPROTKB|Q40882 [details] [associations]
symbol:fbp11 "Fbp11 protein" species:4102 "Petunia x
hybrida" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 EMBL:X81852
ProteinModelPortal:Q40882 IntAct:Q40882 Uniprot:Q40882
Length = 228
Score = 124 (48.7 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 30/109 (27%), Positives = 52/109 (47%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN R +TF KR +G+ +K EL L + IA +VFS G+ + + N +I+
Sbjct: 8 IKRIENNTNRQVTFCKRRNGLLKKAYELSVLCDAEIALIVFSTRGRVYEYANNNIKGTIE 67
Query: 61 RFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRTFIAK 109
R+ + TQ Y+ ++L Q + N +R + +
Sbjct: 68 RYKKATAETSNACTTQEL--NAQFYQQESKKLRQQIQLLQNTNRHLVGE 114
>UNIPROTKB|Q0J466 [details] [associations]
symbol:MADS7 "MADS-box transcription factor 7"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0009908 EMBL:AP008214
EMBL:U78891 EMBL:U31994 EMBL:Y15008 EMBL:AY332477 EMBL:AY551921
EMBL:AP005529 PIR:T04169 PIR:T04307 PIR:T04335
RefSeq:NP_001062335.1 UniGene:Os.2236 ProteinModelPortal:Q0J466
IntAct:Q0J466 EnsemblPlants:LOC_Os08g41950.2 GeneID:4346134
KEGG:osa:4346134 Gramene:Q0J466 ProtClustDB:CLSN2697505
Uniprot:Q0J466
Length = 249
Score = 125 (49.1 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 32/106 (30%), Positives = 56/106 (52%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSF-GNPSIEAVA 59
+K+IEN+ R +TF+KR +G+ +K EL L + +A ++FS GK + F S+
Sbjct: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTL 67
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRT 105
++ C ET + E+ + + E L++ A ++NL RT
Sbjct: 68 EKYQ--KCSYAG-PETAVQNRESEQLKASRNEYLKLKARVENLQRT 110
>UNIPROTKB|Q6EU39 [details] [associations]
symbol:MADS6 "MADS-box transcription factor 6"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] [GO:0010022 "meristem determinacy"
evidence=IMP] [GO:0010093 "specification of floral organ identity"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0045893 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 GO:GO:0010228
SUPFAM:SSF55455 KO:K09264 GO:GO:0010093 EMBL:AP008208 EMBL:CM000139
GO:GO:0010022 EMBL:U78782 EMBL:FJ666318 EMBL:AP004178 EMBL:AK069103
PIR:T04167 RefSeq:NP_001047749.1 UniGene:Os.7271
ProteinModelPortal:Q6EU39 IntAct:Q6EU39
EnsemblPlants:LOC_Os02g45770.1 GeneID:4330328 KEGG:osa:4330328
Gramene:Q6EU39 OMA:SAGITKT ProtClustDB:CLSN2693070 Uniprot:Q6EU39
Length = 250
Score = 125 (49.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 32/105 (30%), Positives = 56/105 (53%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN+ R +TFSKR +G+ +K EL L + +A ++FS GK + FG+ I
Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLE 67
Query: 61 RFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRT 105
R+ +C +++ ET + + E+ ++ A + L RT
Sbjct: 68 RYQ--HC-CYNAQDSNNALSETQSW---YHEMSKLKAKFEALQRT 106
>TAIR|locus:2173522 [details] [associations]
symbol:AGL8 "AGAMOUS-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009911 "positive regulation of flower development"
evidence=TAS] [GO:0010077 "maintenance of inflorescence meristem
identity" evidence=IGI] [GO:0031540 "regulation of anthocyanin
biosynthetic process" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0010154 "fruit development" evidence=IMP]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0010077
KO:K09264 EMBL:U33473 EMBL:AB008269 EMBL:AF386929 EMBL:AY072463
IPI:IPI00522952 PIR:S71208 RefSeq:NP_568929.1 UniGene:At.5426
ProteinModelPortal:Q38876 SMR:Q38876 IntAct:Q38876 STRING:Q38876
EnsemblPlants:AT5G60910.1 GeneID:836212 KEGG:ath:AT5G60910
GeneFarm:3484 TAIR:At5g60910 InParanoid:Q38876 OMA:DSCMERI
PhylomeDB:Q38876 ProtClustDB:CLSN2690058 Genevestigator:Q38876
GermOnline:AT5G60910 GO:GO:0048830 GO:GO:0010154 GO:GO:0010093
Uniprot:Q38876
Length = 242
Score = 124 (48.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/113 (31%), Positives = 59/113 (52%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR SG+ +K E+ L + +A +VFS GK F + S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERIL 67
Query: 60 ---NRFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRTFIAK 109
+R+L + Q+ R +Q W V E H +L ++ R F+ +
Sbjct: 68 ERYDRYLYSDKQLVGRDVSQSENW---VLE--HAKLKARVEVLEKNKRNFMGE 115
>TAIR|locus:2121924 [details] [associations]
symbol:AGL24 "AT4G24540" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0010220 "positive regulation of
vernalization response" evidence=IEP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0000060 "protein import into nucleus,
translocation" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0010077 "maintenance of inflorescence meristem identity"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0048438 "floral whorl development" evidence=IGI] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:0043565
"sequence-specific DNA binding" evidence=IPI] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEP]
[GO:0010076 "maintenance of floral meristem identity" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048481
"ovule development" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 GO:GO:0000060 EMBL:AL035356 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 HSSP:Q02078 GO:GO:0048510
EMBL:AF005158 EMBL:AF005159 EMBL:AL161561 EMBL:BT025171
EMBL:AB493697 IPI:IPI00544128 PIR:T05580 PIR:T51827
RefSeq:NP_194185.1 UniGene:At.4507 ProteinModelPortal:O82794
SMR:O82794 IntAct:O82794 STRING:O82794 EnsemblPlants:AT4G24540.1
GeneID:828556 KEGG:ath:AT4G24540 GeneFarm:3509 TAIR:At4g24540
InParanoid:O82794 OMA:LHASNIN PhylomeDB:O82794
ProtClustDB:CLSN2915842 GO:GO:0010582 GO:GO:0048438 GO:GO:0010076
GO:GO:0010077 GO:GO:0010220 Uniprot:O82794
Length = 220
Score = 122 (48.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+KKI+N R +TFSKR GI++K EL L + +A ++FS +GK F F + + +
Sbjct: 8 IKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSSRMRDILG 67
Query: 61 RF 62
R+
Sbjct: 68 RY 69
>TAIR|locus:2041233 [details] [associations]
symbol:SVP "AT2G22540" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;RCA] [GO:0009910 "negative regulation
of flower development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048438 "floral whorl development" evidence=IGI]
[GO:0000900 "translation repressor activity, nucleic acid binding"
evidence=IDA] [GO:0009266 "response to temperature stimulus"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010076 "maintenance of floral
meristem identity" evidence=IGI] [GO:0010582 "floral meristem
determinacy" evidence=IGI] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009556
"microsporogenesis" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0031348 "negative regulation of defense response"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0045892
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
GO:GO:0009910 GO:GO:0010582 GO:GO:0048438 GO:GO:0010076
EMBL:AC006592 GO:GO:0009266 GO:GO:0000900 OMA:CSSSMKE EMBL:AF211171
EMBL:EU078686 IPI:IPI00536448 IPI:IPI00549063 IPI:IPI00938617
RefSeq:NP_001154528.1 RefSeq:NP_179840.2 UniGene:At.22081
ProteinModelPortal:Q9FVC1 SMR:Q9FVC1 DIP:DIP-33797N IntAct:Q9FVC1
STRING:Q9FVC1 PaxDb:Q9FVC1 PRIDE:Q9FVC1 EnsemblPlants:AT2G22540.1
GeneID:816787 KEGG:ath:AT2G22540 GeneFarm:3510 TAIR:At2g22540
InParanoid:Q9FVC1 PhylomeDB:Q9FVC1 ProtClustDB:CLSN2690861
Genevestigator:Q9FVC1 GermOnline:AT2G22540 Uniprot:Q9FVC1
Length = 240
Score = 123 (48.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
++KI+N R +TFSKR G+++K EL L + +A ++FS +GK F F + S++ V
Sbjct: 8 IRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLE 67
Query: 61 RFLGLNCQMRK-RKETQP 77
R N Q + K QP
Sbjct: 68 RH---NLQSKNLEKLDQP 82
>TAIR|locus:505006709 [details] [associations]
symbol:AGL42 "AGAMOUS-like 42" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0009838 "abscission" evidence=IMP] [GO:0010150
"leaf senescence" evidence=IMP] [GO:0080187 "floral organ
senescence" evidence=IMP] [GO:0010048 "vernalization response"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 HOGENOM:HOG000155301 SUPFAM:SSF55455 HSSP:Q02078
GO:GO:0009909 EMBL:AB016880 GO:GO:0080187 EMBL:AY054220
EMBL:AY065206 EMBL:AY066035 EMBL:AY096509 EMBL:AY141213
IPI:IPI00526027 RefSeq:NP_001032123.1 RefSeq:NP_568952.1
RefSeq:NP_851247.1 UniGene:At.26394 ProteinModelPortal:Q9FIS1
SMR:Q9FIS1 IntAct:Q9FIS1 STRING:Q9FIS1 EnsemblPlants:AT5G62165.1
EnsemblPlants:AT5G62165.2 EnsemblPlants:AT5G62165.3 GeneID:836337
KEGG:ath:AT5G62165 TAIR:At5g62165 InParanoid:Q9FIS1 OMA:EASHMIT
PhylomeDB:Q9FIS1 ProtClustDB:CLSN2690064 ArrayExpress:Q9FIS1
Genevestigator:Q9FIS1 GO:GO:0009838 Uniprot:Q9FIS1
Length = 210
Score = 121 (47.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
MKKIEN R +TFSKR +G+ +K EL L + ++ ++FSQ G+ + F + ++
Sbjct: 8 MKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSSDMQKTIE 67
Query: 61 RF 62
R+
Sbjct: 68 RY 69
>UNIPROTKB|Q6EUV6 [details] [associations]
symbol:grcd3 "MADS domain protein" species:18101 "Gerbera
hybrid cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:AJ784157
ProteinModelPortal:Q6EUV6 IntAct:Q6EUV6 Uniprot:Q6EUV6
Length = 247
Score = 123 (48.4 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 31/105 (29%), Positives = 54/105 (51%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN+ R +TFSKR +G+ +K EL L + + ++FS K + FG+ +
Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVGLIIFSSRDKLYEFGSVGVMKTLE 67
Query: 61 RFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRT 105
R+ C + R ET + +QE+ ++ A ++L RT
Sbjct: 68 RYQ--RCCFNPQDNNNER--ETQSW---YQEVSKLKAKFESLQRT 105
>TAIR|locus:2127213 [details] [associations]
symbol:AGL19 "AGAMOUS-like 19" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010048 "vernalization response" evidence=RCA;IMP] [GO:0048510
"regulation of timing of transition from vegetative to reproductive
phase" evidence=IMP] [GO:0043481 "anthocyanin accumulation in
tissues in response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
ProtClustDB:CLSN2685538 GO:GO:0009908 EMBL:AF312664 EMBL:AL031018
EMBL:AL161558 EMBL:AY142523 IPI:IPI00538138 PIR:T05126
RefSeq:NP_194026.1 UniGene:At.2376 ProteinModelPortal:O82743
SMR:O82743 IntAct:O82743 STRING:O82743 EnsemblPlants:AT4G22950.1
GeneID:828394 KEGG:ath:AT4G22950 GeneFarm:3503 TAIR:At4g22950
InParanoid:O82743 OMA:SSEVNID PhylomeDB:O82743
Genevestigator:O82743 GermOnline:AT4G22950 GO:GO:0048510
GO:GO:0010048 Uniprot:O82743
Length = 219
Score = 121 (47.7 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
MK+IEN R +TFSKR +G+ +K EL L + +A ++FS K + F + SI A
Sbjct: 8 MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAATIE 67
Query: 61 RF 62
R+
Sbjct: 68 RY 69
>UNIPROTKB|Q5K4R0 [details] [associations]
symbol:MADS47 "MADS-box transcription factor 47"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009742 "brassinosteroid mediated signaling
pathway" evidence=IMP] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0009742
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0009910 GO:GO:0010582
GO:GO:0048438 GO:GO:0010076 GO:GO:0009266 GO:GO:0000900
EMBL:AY345221 EMBL:AY345222 EMBL:AJ536158 EMBL:AC125471
EMBL:AJ293816 RefSeq:NP_001049203.2 UniGene:Os.22281
ProteinModelPortal:Q5K4R0 IntAct:Q5K4R0 GeneID:4331872
KEGG:osa:4331872 Gramene:Q5K4R0 Uniprot:Q5K4R0
Length = 246
Score = 122 (48.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 24/76 (31%), Positives = 47/76 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+++I+N R +TFSKR G+++K EL L + + +VFS +GK F F + S+E + +
Sbjct: 27 IRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIID 86
Query: 61 RFLGLNCQMRKRKETQ 76
R+ + +++ + +Q
Sbjct: 87 RYNSHSKTLQRAEPSQ 102
>UNIPROTKB|Q7XUN2 [details] [associations]
symbol:MADS17 "MADS-box transcription factor 17"
species:39947 "Oryza sativa Japonica Group" [GO:0010093
"specification of floral organ identity" evidence=IMP]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 GO:GO:0010228 SUPFAM:SSF55455
GO:GO:0010093 EMBL:AF109153 EMBL:AY551918 EMBL:AL606688
EMBL:AF095646 ProteinModelPortal:Q7XUN2 IntAct:Q7XUN2
KEGG:dosa:Os04t0580700-01 Gramene:Q7XUN2 Uniprot:Q7XUN2
Length = 249
Score = 121 (47.7 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN+ R +TFSKR +G+ +K EL L + +A ++FS GK + FG+ I
Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLE 67
Query: 61 RF 62
++
Sbjct: 68 KY 69
>UNIPROTKB|Q40885 [details] [associations]
symbol:AG1 "Floral homeotic protein AGAMOUS" species:4102
"Petunia x hybrida" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:X72912 EMBL:AB076051 PIR:JQ2212
ProteinModelPortal:Q40885 IntAct:Q40885 Uniprot:Q40885
Length = 242
Score = 120 (47.3 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN R +TF KR +G+ +K EL L + +A +VFS G+ + + N S++A
Sbjct: 24 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIE 83
Query: 61 RF 62
R+
Sbjct: 84 RY 85
>UNIPROTKB|Q9FST1 [details] [associations]
symbol:grcd1 "MADS box protein" species:18101 "Gerbera
hybrid cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:Q02078 EMBL:AJ400623 ProteinModelPortal:Q9FST1
IntAct:Q9FST1 Uniprot:Q9FST1
Length = 242
Score = 120 (47.3 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TF+KR +G+ +K EL L + +A +VFS GK + F + S +
Sbjct: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSTRGKLYEFSSTSSMLKTL 67
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSR 104
R+ C ++ +P E + ++QE +++ D L R
Sbjct: 68 ERYE--KCSFGPPEQRRPAAKEDLQEQSSYQEYMRLKERYDALKR 110
>UNIPROTKB|Q9ZS30 [details] [associations]
symbol:gaga1 "MADS-box protein, GAGA1" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 EMBL:AJ009722
ProteinModelPortal:Q9ZS30 IntAct:Q9ZS30 Uniprot:Q9ZS30
Length = 264
Score = 120 (47.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 31/106 (29%), Positives = 52/106 (49%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN R +TF KR +G+ +K EL L + +A +VFS G+ + + N S++ +
Sbjct: 40 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKGTID 99
Query: 61 RFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRTF 106
++ C T T Y+ +L Q A + N +R F
Sbjct: 100 KYKKA-CLDPPTSGTVAEA-NTQYYQQEAAKLRQQIANLQNQNRQF 143
>UNIPROTKB|Q0DEB8 [details] [associations]
symbol:MADS5 "MADS-box transcription factor 5"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 EMBL:AP008212 EMBL:CM000143
GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455
GO:GO:0009908 ProtClustDB:CLSN2693669 EMBL:U78890 EMBL:AB026295
PIR:T04168 RefSeq:NP_001056891.1 UniGene:Os.4367
ProteinModelPortal:Q0DEB8 IntAct:Q0DEB8
EnsemblPlants:LOC_Os06g06750.1 GeneID:4340218
KEGG:dosa:Os06t0162800-01 KEGG:osa:4340218 Gramene:Q0DEB8
OMA:GKEHILL Uniprot:Q0DEB8
Length = 225
Score = 118 (46.6 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 31/106 (29%), Positives = 55/106 (51%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TF+KR +G+ +K EL L + +A ++FS G+ F F S +
Sbjct: 8 LKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTL 67
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRT 105
R+ N + + + ET + N+QE L++ ++ L T
Sbjct: 68 ERYRSCNYNLNSCEASAAL--ETELS--NYQEYLKLKTRVEFLQTT 109
>TAIR|locus:2140578 [details] [associations]
symbol:STK "AT4G09960" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048440 "carpel development" evidence=IMP]
[GO:0048481 "ovule development" evidence=IGI;RCA;IMP] [GO:0048316
"seed development" evidence=IGI] [GO:0080155 "regulation of double
fertilization forming a zygote and endosperm" evidence=IGI]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0009860 "pollen tube growth" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0048441 "petal
development" evidence=RCA] [GO:0048443 "stamen development"
evidence=RCA] [GO:0048507 "meristem development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002687 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048316 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0048481 GO:GO:0080155 EMBL:AL161516
OMA:NENIYLR GO:GO:0048283 IPI:IPI00846258 RefSeq:NP_001078364.1
UniGene:At.2918 ProteinModelPortal:A8MQL9 SMR:A8MQL9 STRING:A8MQL9
EnsemblPlants:AT4G09960.3 GeneID:826586 KEGG:ath:AT4G09960
ProtClustDB:CLSN2685652 Genevestigator:A8MQL9 Uniprot:A8MQL9
Length = 256
Score = 119 (46.9 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN R +TF KR +G+ +K EL L + +A +VFS G+ + + N +I +
Sbjct: 34 IKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNNIRSTIE 93
Query: 61 RFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRTFI 107
R+ C T Y+ +L Q TI N +R +
Sbjct: 94 RYKKA-CSDSTNTSTVQEI-NAAYYQQESAKLRQQIQTIQNSNRNLM 138
>UNIPROTKB|Q10PZ9 [details] [associations]
symbol:MADS1 "MADS-box transcription factor 1"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:DP000009 EMBL:AP008209 eggNOG:COG5068 SUPFAM:SSF55455
GO:GO:0009908 EMBL:L34271 EMBL:AF204063 EMBL:AC105732 EMBL:AC135158
PIR:S53306 RefSeq:NP_001049376.1 UniGene:Os.10941
ProteinModelPortal:Q10PZ9 IntAct:Q10PZ9
EnsemblPlants:LOC_Os03g11614.1 GeneID:4332059 KEGG:osa:4332059
Gramene:Q10PZ9 OMA:SSSCMYK ProtClustDB:CLSN2693669 Uniprot:Q10PZ9
Length = 257
Score = 119 (46.9 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 31/106 (29%), Positives = 54/106 (50%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TF+KR +G+ +K EL L + +A ++FS G+ F F + S +
Sbjct: 8 LKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTL 67
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRT 105
R+ +C + P E N+QE L++ ++ L T
Sbjct: 68 ERYR--SCNYNSQDAAAPE------NEINYQEYLKLKTRVEFLQTT 105
>TAIR|locus:2082618 [details] [associations]
symbol:AGL16 "AGAMOUS-like 16" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010440 "stomatal lineage progression" evidence=IMP]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009556
"microsporogenesis" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0042803 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
EMBL:AY141209 EMBL:BT030046 EMBL:AF312662 IPI:IPI00522001
IPI:IPI01027879 RefSeq:NP_191282.2 UniGene:At.21102 HSSP:Q02078
ProteinModelPortal:A2RVQ5 SMR:A2RVQ5 IntAct:A2RVQ5 STRING:A2RVQ5
PRIDE:A2RVQ5 EnsemblPlants:AT3G57230.1 GeneID:824890
KEGG:ath:AT3G57230 GeneFarm:3515 TAIR:At3g57230 InParanoid:A2RVQ5
OMA:ASEIQFW PhylomeDB:A2RVQ5 ProtClustDB:CLSN2680436
ArrayExpress:A2RVQ5 Genevestigator:A2RVQ5 GO:GO:0010440
Uniprot:A2RVQ5
Length = 240
Score = 118 (46.6 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+I N R +TFSKR +G+ +K EL L + + ++FS +G+ + F + S+++V
Sbjct: 8 IKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSSSMKSVIE 67
Query: 61 RF 62
R+
Sbjct: 68 RY 69
>TAIR|locus:2149264 [details] [associations]
symbol:PI "PISTILLATA" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048481 "ovule development" evidence=RCA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 GO:GO:0009908 KO:K09264 EMBL:AF296825 EMBL:AB035137
EMBL:D30807 EMBL:AF115815 EMBL:AF115816 EMBL:AF115817 EMBL:AF115818
EMBL:AF115819 EMBL:AF115820 EMBL:AF115821 EMBL:AF115822
EMBL:AF115823 EMBL:AF115824 EMBL:AF115825 EMBL:AF115826
EMBL:AF115827 EMBL:AF115828 EMBL:AF115829 EMBL:AF115830
IPI:IPI00548531 PIR:A53839 RefSeq:NP_197524.1 UniGene:At.21403
ProteinModelPortal:P48007 SMR:P48007 IntAct:P48007 STRING:P48007
EnsemblPlants:AT5G20240.1 GeneID:832146 KEGG:ath:AT5G20240
GeneFarm:3488 TAIR:At5g20240 InParanoid:P48007 OMA:KMMEDEN
PhylomeDB:P48007 ProtClustDB:CLSN2687197 Genevestigator:P48007
GermOnline:AT5G20240 Uniprot:P48007
Length = 208
Score = 116 (45.9 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 20/56 (35%), Positives = 38/56 (67%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIE 56
+K+IEN + R++TFSKR +G+ +K E+ L + +A ++F+ +GK + PS++
Sbjct: 8 IKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMD 63
>TAIR|locus:2028830 [details] [associations]
symbol:CAL "CAULIFLOWER" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009911 "positive regulation of flower
development" evidence=TAS] [GO:0010582 "floral meristem
determinacy" evidence=IEP] [GO:0010048 "vernalization response"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] [GO:0048443 "stamen development"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0010582 KO:K09264
GO:GO:0048830 GO:GO:0010093 ProtClustDB:CLSN2682513 EMBL:L36925
EMBL:AB493477 EMBL:AF061401 EMBL:AF061402 EMBL:AF061403
EMBL:AF061404 EMBL:AF061405 EMBL:AF061406 EMBL:AF061407
EMBL:AF061408 EMBL:AF061409 EMBL:AF061410 EMBL:AF061411
EMBL:AF061412 EMBL:AF061413 EMBL:AF061414 EMBL:AF061415
IPI:IPI00538144 PIR:E86389 RefSeq:NP_564243.1 UniGene:At.41269
ProteinModelPortal:Q39081 SMR:Q39081 IntAct:Q39081 STRING:Q39081
EnsemblPlants:AT1G26310.1 GeneID:839172 KEGG:ath:AT1G26310
GeneFarm:3483 TAIR:At1g26310 InParanoid:Q39081 OMA:ESEGNWC
PhylomeDB:Q39081 Genevestigator:Q39081 GermOnline:AT1G26310
Uniprot:Q39081
Length = 255
Score = 118 (46.6 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR +G+ +K E+ L + ++ +VFS GK F + + S +E V
Sbjct: 8 LKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>TAIR|locus:2137070 [details] [associations]
symbol:AGL14 "AGAMOUS-like 14" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0043481
"anthocyanin accumulation in tissues in response to UV light"
evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 EMBL:AL078606 EMBL:AL161532 EMBL:U20184
IPI:IPI00525134 PIR:T09347 RefSeq:NP_192925.1 UniGene:At.42992
ProteinModelPortal:Q38838 SMR:Q38838 IntAct:Q38838 STRING:Q38838
EnsemblPlants:AT4G11880.1 GeneID:826795 KEGG:ath:AT4G11880
GeneFarm:3502 TAIR:At4g11880 InParanoid:Q38838 OMA:RTYTREN
PhylomeDB:Q38838 ProtClustDB:CLSN2685538 Genevestigator:Q38838
GermOnline:AT4G11880 Uniprot:Q38838
Length = 221
Score = 116 (45.9 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 34/119 (28%), Positives = 55/119 (46%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-----I 55
MK+IEN R +TFSKR +G+ +K EL L + +A ++FS GK + F + S +
Sbjct: 8 MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTV 67
Query: 56 EAVANRFLGLNCQMRKRKETQPRWWETP--VYEFNHQELLQMDATIDNLSRTFIAKLNE 112
E R L ++ +Q ET + H E+ + L + I +L +
Sbjct: 68 ERYQKRIQDLGSNHKRNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQ 126
>TAIR|locus:2184118 [details] [associations]
symbol:FLC "FLOWERING LOCUS C" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA;TAS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0010048 "vernalization response"
evidence=IEP;RCA] [GO:0009266 "response to temperature stimulus"
evidence=IMP] [GO:0042752 "regulation of circadian rhythm"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043234 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0042752 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0009908 GO:GO:0009910 GO:GO:0010048
ProtClustDB:CLSN2686365 EMBL:AL356332 EMBL:AF116527 EMBL:AF116528
IPI:IPI00542762 PIR:T50018 RefSeq:NP_196576.1 UniGene:At.1629
UniGene:At.75671 ProteinModelPortal:Q9S7Q7 SMR:Q9S7Q7
DIP:DIP-51640N IntAct:Q9S7Q7 STRING:Q9S7Q7 PaxDb:Q9S7Q7
PRIDE:Q9S7Q7 EnsemblPlants:AT5G10140.1 GeneID:830878
KEGG:ath:AT5G10140 GeneFarm:3548 TAIR:At5g10140 InParanoid:Q9S7Q7
OMA:GAEAEME PhylomeDB:Q9S7Q7 Genevestigator:Q9S7Q7 Uniprot:Q9S7Q7
Length = 196
Score = 114 (45.2 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGN-PSIEAVA 59
+K+IEN+ R +TFSKR +G+ K +L L +++A LV S SGK +SF + ++ +
Sbjct: 8 IKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKIL 67
Query: 60 NRF 62
+R+
Sbjct: 68 DRY 70
>UNIPROTKB|Q9ZS29 [details] [associations]
symbol:GAGA2 "MADS-box protein, GAGA2" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AJ009723 ProteinModelPortal:Q9ZS29 IntAct:Q9ZS29
Uniprot:Q9ZS29
Length = 246
Score = 117 (46.2 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN R +TF KR +G+ +K EL L + +A +VFS G+ + + N S++ +
Sbjct: 23 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKGTID 82
Query: 61 RF 62
R+
Sbjct: 83 RY 84
>UNIPROTKB|O65874 [details] [associations]
symbol:MTF1 "MADS-box transcription factor 1" species:3888
"Pisum sativum" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0009888 "tissue development"
evidence=NAS] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 GO:GO:0009888
EMBL:AJ223318 PIR:T06543 ProteinModelPortal:O65874 Uniprot:O65874
Length = 247
Score = 117 (46.2 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSF-GNPSIEAVA 59
+K++EN+ R +TF+KR +G+ +K EL L + +A +VFS GK + F S+
Sbjct: 8 LKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTL 67
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEFN-HQELLQMDATIDNLSRT 105
R+ N + T E V E + QE L++ A ++L R+
Sbjct: 68 ERYQKCNYGAPEGNVTSK---EALVLELSSQQEYLKLKARYESLQRS 111
>TAIR|locus:2032372 [details] [associations]
symbol:SEP3 "SEPALLATA3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0001708 "cell fate specification"
evidence=RCA;IMP] [GO:0010093 "specification of floral organ
identity" evidence=RCA;IMP] [GO:0009908 "flower development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048481 "ovule development" evidence=RCA;IMP] [GO:0048833
"specification of floral organ number" evidence=IMP] [GO:0048440
"carpel development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0001708 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0010093 GO:GO:0048481 GO:GO:0048833
EMBL:AC002396 EMBL:AF015552 EMBL:AY088272 EMBL:AK118696
IPI:IPI00516255 IPI:IPI00534499 PIR:T00656 RefSeq:NP_564214.2
RefSeq:NP_850953.1 UniGene:At.24086 ProteinModelPortal:O22456
SMR:O22456 IntAct:O22456 STRING:O22456 PaxDb:O22456 PRIDE:O22456
EnsemblPlants:AT1G24260.2 GeneID:839040 KEGG:ath:AT1G24260
GeneFarm:3497 TAIR:At1g24260 InParanoid:O22456 OMA:PLECEPI
PhylomeDB:O22456 ProtClustDB:CLSN2690422 Genevestigator:O22456
GermOnline:AT1G24260 Uniprot:O22456
Length = 251
Score = 117 (46.2 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSF-GNPSIEAVA 59
+K+IEN+ R +TF+KR +G+ +K EL L + +A ++FS GK + F + S+
Sbjct: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTL 67
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRT 105
R+ C + P V + QE L++ D L RT
Sbjct: 68 ERYQ--KCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRT 111
>TAIR|locus:2033273 [details] [associations]
symbol:AP1 "AT1G69120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI;IDA] [GO:0009908 "flower development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0010076 "maintenance
of floral meristem identity" evidence=IGI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0009556 "microsporogenesis" evidence=RCA]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0009860 "pollen tube growth" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010093
"specification of floral organ identity" evidence=RCA] [GO:0048440
"carpel development" evidence=RCA] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0052543 "callose deposition in cell
wall" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC008262 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0010582 GO:GO:0010076
UniGene:At.10200 KO:K09264 GO:GO:0048830 GO:GO:0010093 EMBL:Z16421
EMBL:BT004113 EMBL:BT004951 EMBL:AK175933 EMBL:AY087956
EMBL:AF466771 EMBL:AF466772 EMBL:AF466773 EMBL:AF466774
EMBL:AF466775 EMBL:AF466776 EMBL:AF466777 EMBL:AF466778
EMBL:AF466779 EMBL:AF466780 EMBL:AF466781 EMBL:AF466782
EMBL:AF466783 EMBL:AF466784 EMBL:AF466785 IPI:IPI00543034
PIR:S27109 RefSeq:NP_177074.1 UniGene:At.24302
ProteinModelPortal:P35631 SMR:P35631 IntAct:P35631 STRING:P35631
EnsemblPlants:AT1G69120.1 GeneID:843244 KEGG:ath:AT1G69120
GeneFarm:3482 TAIR:At1g69120 InParanoid:P35631 OMA:LMYESIN
PhylomeDB:P35631 ProtClustDB:CLSN2682513 Genevestigator:P35631
GermOnline:AT1G69120 GO:GO:0009933 Uniprot:P35631
Length = 256
Score = 117 (46.2 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR +G+ +K E+ L + +A +VFS GK F + S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>TAIR|locus:2042182 [details] [associations]
symbol:AGL44 "AGAMOUS-like 44" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0007584 "response to nutrient" evidence=IMP]
[GO:0048527 "lateral root development" evidence=RCA;IMP]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0071249 "cellular response to nitrate" evidence=IEP]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0007155
"cell adhesion" evidence=RCA] [GO:0009556 "microsporogenesis"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010413 "glucuronoxylan
metabolic process" evidence=RCA] [GO:0010638 "positive regulation
of organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0048589 "developmental growth" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0052543 "callose deposition in cell wall" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] [GO:0010167
"response to nitrate" evidence=IMP] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0007584 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
GO:GO:0071249 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
HSSP:Q02078 KO:K09264 EMBL:Z97057 EMBL:AC007210 EMBL:BT005861
EMBL:AK228244 IPI:IPI00529627 PIR:A84515 PIR:T52100
RefSeq:NP_179033.1 UniGene:At.126 ProteinModelPortal:Q9SI38
SMR:Q9SI38 IntAct:Q9SI38 STRING:Q9SI38 EnsemblPlants:AT2G14210.1
GeneID:815907 KEGG:ath:AT2G14210 GeneFarm:3545 TAIR:At2g14210
InParanoid:Q9SI38 OMA:YLQECHR PhylomeDB:Q9SI38
Genevestigator:Q9SI38 Uniprot:Q9SI38
Length = 234
Score = 116 (45.9 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 26/98 (26%), Positives = 53/98 (54%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFG-NPSIEAVA 59
+++I+N R +TFSKR SG+ +K EL L + + ++FS +GK + + N S++ +
Sbjct: 8 IRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASNSSMKTII 67
Query: 60 NRFLGLNCQMRK--RKETQPRWWETPVYEFNHQ-ELLQ 94
R+ + + + ++ ++W+ V Q + LQ
Sbjct: 68 ERYNRVKEEQHQLLNHASEIKFWQREVASLQQQLQYLQ 105
>TAIR|locus:2098826 [details] [associations]
symbol:AGL13 "AGAMOUS-like 13" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL137898
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:U20183
IPI:IPI00520452 PIR:T47904 RefSeq:NP_191671.1 UniGene:At.968
ProteinModelPortal:Q38837 SMR:Q38837 IntAct:Q38837 STRING:Q38837
PRIDE:Q38837 EnsemblPlants:AT3G61120.1 GeneID:825284
KEGG:ath:AT3G61120 GeneFarm:3547 TAIR:At3g61120 InParanoid:Q38837
OMA:KLETEDH PhylomeDB:Q38837 ProtClustDB:CLSN2915737
Genevestigator:Q38837 GermOnline:AT3G61120 Uniprot:Q38837
Length = 244
Score = 116 (45.9 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN+ R +TFSKR SG+ +K EL L + ++ ++FS GK + F N +
Sbjct: 8 VKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTIE 67
Query: 61 RF 62
R+
Sbjct: 68 RY 69
>TAIR|locus:2007186 [details] [associations]
symbol:AGL94 "AGAMOUS-like 94" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11831
EMBL:AB115013 IPI:IPI00543022 RefSeq:NP_177113.3 UniGene:At.35408
ProteinModelPortal:Q766C0 SMR:Q766C0 EnsemblPlants:AT1G69540.1
GeneID:843289 KEGG:ath:AT1G69540 TAIR:At1g69540 eggNOG:NOG276172
HOGENOM:HOG000243910 InParanoid:Q766C0 OMA:QILEASY PhylomeDB:Q766C0
ProtClustDB:CLSN2918808 Genevestigator:Q766C0 Uniprot:Q766C0
Length = 344
Score = 119 (46.9 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKP-FSFGNPSIEAVA 59
+KK++N +GR T++KR GI +K EL L + L+FS GK G SI V
Sbjct: 8 IKKLQNMNGRQCTYTKRRHGIMKKAKELSILCDIDVVLLMFSPMGKASICIGKHSIGEVI 67
Query: 60 NRFLGLNCQMR-KRKETQPRWWETPVYEFNHQELLQMDATIDNLSRTFIAKLNEK 113
+F L+ Q R KRK + NH + + +D +S + L+EK
Sbjct: 68 AKFAQLSPQERAKRKLENLEALRKTFMKANHD--IDISKFLDRISTPTVEVLSEK 120
>TAIR|locus:2121070 [details] [associations]
symbol:AGL21 "AT4G37940" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0009556 "microsporogenesis" evidence=RCA] [GO:0009691
"cytokinin biosynthetic process" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161592 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
ProtClustDB:CLSN2683748 EMBL:AF336979 EMBL:AL035538 IPI:IPI00531853
PIR:T05621 RefSeq:NP_195507.1 UniGene:At.28801
ProteinModelPortal:Q9SZJ6 SMR:Q9SZJ6 IntAct:Q9SZJ6 STRING:Q9SZJ6
EnsemblPlants:AT4G37940.1 GeneID:829950 KEGG:ath:AT4G37940
GeneFarm:3544 TAIR:At4g37940 InParanoid:Q9SZJ6 OMA:DDESHTQ
PhylomeDB:Q9SZJ6 ArrayExpress:Q9SZJ6 Genevestigator:Q9SZJ6
GermOnline:AT4G37940 Uniprot:Q9SZJ6
Length = 228
Score = 115 (45.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 20/62 (32%), Positives = 40/62 (64%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+++I++ R +TFSKR G+ +K EL L + + ++FS +GK + F + S+++V +
Sbjct: 8 IQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVID 67
Query: 61 RF 62
R+
Sbjct: 68 RY 69
>TAIR|locus:2144355 [details] [associations]
symbol:MAF5 "MADS AFFECTING FLOWERING 5" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0010048 "vernalization response"
evidence=IEP;RCA] [GO:0043481 "anthocyanin accumulation in tissues
in response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002688
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
GO:GO:0009910 GO:GO:0010048 ProtClustDB:CLSN2686365 EMBL:BT025268
EMBL:AK175180 IPI:IPI00523683 RefSeq:NP_201313.2 UniGene:At.28687
ProteinModelPortal:Q683D7 SMR:Q683D7 STRING:Q683D7
EnsemblPlants:AT5G65080.1 GeneID:836632 KEGG:ath:AT5G65080
TAIR:At5g65080 InParanoid:Q683D7 PhylomeDB:Q683D7
ArrayExpress:Q683D7 Genevestigator:Q683D7 Uniprot:Q683D7
Length = 205
Score = 113 (44.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 36/120 (30%), Positives = 61/120 (50%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPF-SFGNPSIEAVA 59
+K+IEN+ R +TF KR +G+ K +L L S++A + S +GK + S S+ +
Sbjct: 15 IKRIENKSSRQVTFCKRRNGLMEKARQLSILCGSSVALFIVSSTGKLYNSSSGDSMAKII 74
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQM------DATIDNLSRTFIAKLNEK 113
+RF Q ET +T Y +H+ELL++ +A DN+S + + E+
Sbjct: 75 SRF---KIQQADDPETLDLEDKTQDY-LSHKELLEIVQRKIEEAKGDNVSIESLISMEEQ 130
>TAIR|locus:2056760 [details] [associations]
symbol:AGL30 "AGAMOUS-like 30" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0009555 "pollen
development" evidence=IGI] [GO:0010584 "pollen exine formation"
evidence=RCA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 EMBL:CP002685
GO:GO:0009555 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 EMBL:DQ446459 IPI:IPI00759399 RefSeq:NP_001077873.1
UniGene:At.41433 ProteinModelPortal:Q1PFA4 SMR:Q1PFA4
EnsemblPlants:AT2G03060.2 GeneID:814835 KEGG:ath:AT2G03060
TAIR:At2g03060 OMA:ARISEIH PhylomeDB:Q1PFA4 ProtClustDB:CLSN2699067
ArrayExpress:Q1PFA4 Genevestigator:Q1PFA4 Uniprot:Q1PFA4
Length = 386
Score = 119 (46.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 41/123 (33%), Positives = 68/123 (55%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKP-FSFGN-PSIEAV 58
+KK+EN +GR TF+KR +GI +K +EL L I L+FS +GK G S+E V
Sbjct: 8 IKKLENTNGRQSTFAKRKNGILKKANELSILCDIDIVLLMFSPTGKAAICCGTRSSMEEV 67
Query: 59 ANRFLGLNCQMR-KRK----ETQPRWWETPVYEFNHQELL-QMDATIDNLS---RTFIAK 109
+F + Q R KRK E + ++ ++ N +E + ++T+++LS R A+
Sbjct: 68 IAKFSQVTPQERTKRKFESLENLKKTFQKLDHDVNIREFIASSNSTVEDLSTQARILQAR 127
Query: 110 LNE 112
++E
Sbjct: 128 ISE 130
>UNIPROTKB|Q9ATE5 [details] [associations]
symbol:FBP24 "MADS-box protein FBP24" species:4102 "Petunia
x hybrida" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:AF335242
ProteinModelPortal:Q9ATE5 SMR:Q9ATE5 IntAct:Q9ATE5 Uniprot:Q9ATE5
Length = 268
Score = 116 (45.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSF-GNP-SIEAV 58
+K+IEN+ R +TFSKR +G+ +K EL L + I ++FS GK F + P S+ +
Sbjct: 11 VKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQI 70
Query: 59 ANRFL 63
+R+L
Sbjct: 71 ISRYL 75
>UNIPROTKB|Q10CQ1 [details] [associations]
symbol:MADS14 "MADS-box transcription factor 14"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:DP000009 EMBL:AP008209 eggNOG:COG5068 SUPFAM:SSF55455
GO:GO:0009908 KO:K09264 EMBL:AF377947 EMBL:AC135225 EMBL:AC092556
EMBL:AF058697 EMBL:AB041020 EMBL:AY332478 EMBL:AY551916
RefSeq:NP_001051300.1 UniGene:Os.2348 ProteinModelPortal:Q10CQ1
IntAct:Q10CQ1 EnsemblPlants:LOC_Os03g54160.2 GeneID:4334140
KEGG:osa:4334140 Gramene:Q10CQ1 ProtClustDB:CLSN2694303
Uniprot:Q10CQ1
Length = 246
Score = 115 (45.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR SG+ +K +E+ L + +A ++FS GK + + S ++ +
Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>UNIPROTKB|Q9ZS28 [details] [associations]
symbol:gdef1 "MADs-box protein, GDEF1" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746
EMBL:AJ009724 ProteinModelPortal:Q9ZS28 IntAct:Q9ZS28
Uniprot:Q9ZS28
Length = 226
Score = 114 (45.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS 54
+KKIEN R +T+SKR +GI++K EL L + ++ ++FS +GK + +PS
Sbjct: 8 IKKIENNTNRQVTYSKRRNGIFKKAHELTVLCDAKVSLIMFSNTGKFHEYISPS 61
>TAIR|locus:2025282 [details] [associations]
symbol:MAF1 "MADS AFFECTING FLOWERING 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0009910 "negative regulation of flower
development" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0043481
"anthocyanin accumulation in tissues in response to UV light"
evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 EMBL:CP002684 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002291 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0009908 GO:GO:0009910 EMBL:AF312665
EMBL:AF312666 EMBL:AF342808 EMBL:AY141210 EMBL:AY034083
EMBL:AK117577 EMBL:BT004598 EMBL:AK175247 EMBL:AK176270
EMBL:AK227948 EMBL:AY088709 IPI:IPI00526099 IPI:IPI00530435
IPI:IPI00531574 IPI:IPI00939001 PIR:F96799 RefSeq:NP_177833.3
RefSeq:NP_850979.1 RefSeq:NP_850980.2 RefSeq:NP_974160.2
UniGene:At.19799 HSSP:P11746 ProteinModelPortal:Q9AT76 SMR:Q9AT76
IntAct:Q9AT76 EnsemblPlants:AT1G77080.4 GeneID:844042
KEGG:ath:AT1G77080 GeneFarm:3552 TAIR:At1g77080 InParanoid:Q9AT76
OMA:ASQMGKN PhylomeDB:Q9AT76 ProtClustDB:CLSN2686365
ArrayExpress:Q9AT76 Genevestigator:Q9AT76 GO:GO:0048573
Uniprot:Q9AT76
Length = 196
Score = 112 (44.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 35/121 (28%), Positives = 62/121 (51%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPF-SFGNPSIEAVA 59
+K+IEN+ R +TFSKR +G+ K +L L S++A +V S SGK + S I +
Sbjct: 8 IKRIENKSSRQVTFSKRRNGLIDKARQLSILCESSVAVVVVSASGKLYDSSSGDDISKII 67
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEF-NHQELLQM------DATIDNLSRTFIAKLNE 112
+R+ +++ E + E + + H+ELL+ + +DN+S + L E
Sbjct: 68 DRY-----EIQHADELRALDLEEKIQNYLPHKELLETVQSKLEEPNVDNVSVDSLISLEE 122
Query: 113 K 113
+
Sbjct: 123 Q 123
>TAIR|locus:2066050 [details] [associations]
symbol:AGL17 "AGAMOUS-like 17" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048578 "positive regulation of long-day
photoperiodism, flowering" evidence=IMP] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009556 "microsporogenesis"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:AC006340
EMBL:U20186 IPI:IPI00531185 PIR:H84614 RefSeq:NP_179848.1
UniGene:At.39413 ProteinModelPortal:Q38840 SMR:Q38840 IntAct:Q38840
STRING:Q38840 PRIDE:Q38840 EnsemblPlants:AT2G22630.1 GeneID:816794
KEGG:ath:AT2G22630 GeneFarm:3517 TAIR:At2g22630 InParanoid:Q38840
OMA:GHHELVD PhylomeDB:Q38840 ProtClustDB:CLSN2683748
ArrayExpress:Q38840 Genevestigator:Q38840 GermOnline:AT2G22630
GO:GO:0048578 Uniprot:Q38840
Length = 227
Score = 114 (45.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 28/115 (24%), Positives = 57/115 (49%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
++KI++ R +TFSKR G+ +K EL L + + ++FS + K + F + S+++
Sbjct: 8 IQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSSVKSTIE 67
Query: 61 RFLGLNCQMRK--RKETQPRWWETPVYEFNHQELLQMDATIDNLSRTFIAKLNEK 113
RF + ++ ++ ++W+ E QEL + L+ + L+ K
Sbjct: 68 RFNTAKMEEQELMNPASEVKFWQREA-ETLRQELHSLQENYRQLTGVELNGLSVK 121
>UNIPROTKB|Q0D4T4 [details] [associations]
symbol:MADS18 "MADS-box transcription factor 18"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 GO:GO:0010582 GO:GO:0010076 GO:GO:0010077
GO:GO:0010154 GO:GO:0009933 EMBL:AP008213 EMBL:AF091458
EMBL:AJ011675 EMBL:AP005175 RefSeq:NP_001060225.1 UniGene:Os.4573
ProteinModelPortal:Q0D4T4 IntAct:Q0D4T4
EnsemblPlants:LOC_Os07g41370.1 GeneID:4343851
KEGG:dosa:Os07t0605200-01 KEGG:osa:4343851 Gramene:Q0D4T4
OMA:PPWMLRT ProtClustDB:CLSN2696916 Uniprot:Q0D4T4
Length = 249
Score = 115 (45.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 23/63 (36%), Positives = 40/63 (63%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGN-PSIEAVA 59
+++IEN+ R +TFSKR +G+ +K E+ L + +A +VFS GK + F + S+E +
Sbjct: 8 LRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>TAIR|locus:2184427 [details] [associations]
symbol:AGL99 "AGAMOUS-like 99" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
HOGENOM:HOG000033848 ProtClustDB:CLSN2681906 EMBL:AL162875
EMBL:DQ056669 IPI:IPI00538160 PIR:T48460 RefSeq:NP_196084.1
UniGene:At.54720 ProteinModelPortal:Q9LZ61 SMR:Q9LZ61 IntAct:Q9LZ61
STRING:Q9LZ61 EnsemblPlants:AT5G04640.1 GeneID:830341
KEGG:ath:AT5G04640 TAIR:At5g04640 eggNOG:NOG275504 OMA:RDAMDSM
PhylomeDB:Q9LZ61 Genevestigator:Q9LZ61 Uniprot:Q9LZ61
Length = 322
Score = 117 (46.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 34/105 (32%), Positives = 57/105 (54%)
Query: 4 IENEDGRLITFSKRTSGIYRKVSELVTLT---VSAIARLVFSQSGKPF-SFGNPSIEAVA 59
IE +D R + FSKR+ G+Y K S+L L+ ++ IA V S+S F +FG+ S++ V
Sbjct: 13 IEKKDSRAVAFSKRSRGLYSKASDLCLLSDAQIAIIATPVSSKSNVSFYTFGHSSVDNVV 72
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSR 104
FL N + R+ WWE ++L ++ +D++S+
Sbjct: 73 AAFL-TNQRPREGLGLD-YWWEDERLS-KSEDLEELRDAMDSMSK 114
>SGD|S000004646 [details] [associations]
symbol:MCM1 "Transcription factor involved in both repression
and activation" species:4932 "Saccharomyces cerevisiae" [GO:0003688
"DNA replication origin binding" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006525 "arginine metabolic process" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA;IMP] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IMP;IPI] [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=IDA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IMP;IDA]
[GO:0044377 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding, bending" evidence=IDA;IMP]
[GO:0090282 "positive regulation of transcription involved in
G2/M-phase of mitotic cell cycle" evidence=IMP] [GO:0006270 "DNA
replication initiation" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0001133 "sequence-specific
transcription regulatory region DNA binding RNA polymerase II
transcription factor recruiting transcription factor activity"
evidence=IDA;IPI] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IDA;IPI] [GO:0001198
"negative regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0001197 "positive regulation of mating-type
specific transcription from RNA polymerase II promoter"
evidence=IDA;IMP] [GO:0031494 "regulation of mating type switching"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:1900465 "negative regulation of arginine
catabolic process by negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:1900466 "positive
regulation of arginine biosynthetic process by positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 SGD:S000004646 GO:GO:0001078
GO:GO:0003688 GO:GO:0001077 EMBL:BK006946 GO:GO:0000790
GO:GO:0006270 eggNOG:COG5068 SUPFAM:SSF55455 EMBL:Z48502
GO:GO:0006525 GeneTree:ENSGT00400000022158 OrthoDB:EOG4P2TC4
GO:GO:0001102 GO:GO:0001133 GO:GO:0090282 GO:GO:0001197 KO:K12412
EMBL:X52453 EMBL:X14187 EMBL:M17511 EMBL:AY557985 PIR:A34599
RefSeq:NP_013757.1 PDB:1MNM PDBsum:1MNM ProteinModelPortal:P11746
SMR:P11746 DIP:DIP-72N IntAct:P11746 MINT:MINT-478633 STRING:P11746
PaxDb:P11746 EnsemblFungi:YMR043W GeneID:855060 KEGG:sce:YMR043W
CYGD:YMR043w OMA:CLNAPDD EvolutionaryTrace:P11746 NextBio:978315
Genevestigator:P11746 GermOnline:YMR043W GO:GO:0044377
GO:GO:1900465 GO:GO:0001198 GO:GO:1900466 GO:GO:0031494
Uniprot:P11746
Length = 286
Score = 116 (45.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K IEN+ R +TFSKR GI +K EL LT + + LV S++G ++F P E +
Sbjct: 23 IKFIENKTRRHVTFSKRKHGIMKKAFELSVLTGTQVLLLVVSETGLVYTFSTPKFEPIVT 82
Query: 61 RFLGLN 66
+ G N
Sbjct: 83 QQEGRN 88
>TAIR|locus:2206016 [details] [associations]
symbol:AGL55 "AGAMOUS-like 55" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC018908 SUPFAM:SSF55455
HSSP:Q02078 IPI:IPI00522164 PIR:F96634 RefSeq:NP_176288.1
UniGene:At.64874 ProteinModelPortal:Q9C960 SMR:Q9C960 IntAct:Q9C960
STRING:Q9C960 EnsemblPlants:AT1G60920.1 GeneID:842383
KEGG:ath:AT1G60920 TAIR:At1g60920 eggNOG:NOG284347
HOGENOM:HOG000152226 OMA:AFDRLEN PhylomeDB:Q9C960
ProtClustDB:CLSN2681823 Genevestigator:Q9C960 Uniprot:Q9C960
Length = 191
Score = 111 (44.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/113 (27%), Positives = 61/113 (53%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLT----VSAIARLVFSQSGKPF-SFGNPSI 55
MK+IE+++ R + F+KR SG++ K SEL L+ ++ +A + S S F SFG+ S+
Sbjct: 10 MKRIEDKNVRAVAFTKRKSGLFHKASELCLLSPGTQIAILATPLSSHSHASFYSFGHSSV 69
Query: 56 EAVANRFL-GLNCQMRKRKETQPR---WWETPVYEFNHQELLQMDATIDNLSR 104
+ V + L + + ++ + WWE ++ + + ++ +D +SR
Sbjct: 70 DHVVSSLLHNQHPSLPTNQDNRSGLGFWWEDQAFD-RLENVDELKEAVDAVSR 121
>TAIR|locus:2102871 [details] [associations]
symbol:AGL79 "AGAMOUS-like 79" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002686 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455
HSSP:Q02078 GO:GO:0048830 GO:GO:0010093 OMA:PPWMLRT EMBL:AY141238
IPI:IPI00517180 RefSeq:NP_189645.2 UniGene:At.36813
ProteinModelPortal:Q7X9H6 SMR:Q7X9H6 IntAct:Q7X9H6
EnsemblPlants:AT3G30260.1 GeneID:822726 KEGG:ath:AT3G30260
TAIR:At3g30260 InParanoid:Q7X9H6 PhylomeDB:Q7X9H6
ProtClustDB:CLSN2918545 ArrayExpress:Q7X9H6 Genevestigator:Q7X9H6
Uniprot:Q7X9H6
Length = 249
Score = 114 (45.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 23/63 (36%), Positives = 40/63 (63%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFG-NPSIEAVA 59
+++IEN+ R +TFSKR +G+ +K E+ L + +A +VFS GK F + S+E +
Sbjct: 8 LRRIENKIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYSAGSSMERIL 67
Query: 60 NRF 62
+R+
Sbjct: 68 DRY 70
>UNIPROTKB|Q9XJ66 [details] [associations]
symbol:MADS22 "MADS-box transcription factor 22"
species:39947 "Oryza sativa Japonica Group" [GO:0007275
"multicellular organismal development" evidence=IMP] [GO:0009908
"flower development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IMP] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0009908
GO:GO:0009910 GO:GO:0048510 GO:GO:0010582 GO:GO:0048438
GO:GO:0010076 GO:GO:0010077 GO:GO:0009266 GO:GO:0000900
EMBL:AB003322 EMBL:AB107957 EMBL:AP004159 RefSeq:NP_001048193.1
UniGene:Os.4171 ProteinModelPortal:Q9XJ66 IntAct:Q9XJ66
STRING:Q9XJ66 EnsemblPlants:LOC_Os02g52340.1 GeneID:4330805
KEGG:osa:4330805 Gramene:Q9XJ66 OMA:CSSSMKE ProtClustDB:CLSN2693232
Uniprot:Q9XJ66
Length = 228
Score = 113 (44.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IE+ R +TFSKR G+++K EL L + +A +VFS +GK F + S+ + +
Sbjct: 8 IKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMNEIID 67
Query: 61 RF 62
++
Sbjct: 68 KY 69
>UNIPROTKB|Q9ZS27 [details] [associations]
symbol:gdef2 "MADS-box protein, GDEF2" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746
EMBL:AJ009725 ProteinModelPortal:Q9ZS27 IntAct:Q9ZS27
Uniprot:Q9ZS27
Length = 228
Score = 113 (44.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 34/112 (30%), Positives = 56/112 (50%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+KKIEN R +T+SKR +G+++K SEL L + ++ ++ S + K + +PSI
Sbjct: 8 IKKIENSTNRQVTYSKRRNGLFKKASELTVLCDAKVSIIMVSCTDKLHEYISPSI--TTK 65
Query: 61 RFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRTFIAKLNE 112
+F Q +K W + YE +EL Q+ NL R +L +
Sbjct: 66 QFFD---QYQKASGID--LWNSH-YEKMQEELRQLKEVNRNLRRQIRQRLGD 111
>DICTYBASE|DDB_G0281387 [details] [associations]
symbol:srfA "SRF-related protein" species:44689
"Dictyostelium discoideum" [GO:0042244 "spore wall assembly"
evidence=IMP] [GO:0031289 "actin phosphorylation" evidence=IMP]
[GO:0031247 "actin rod assembly" evidence=IMP] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISS;IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA;IC]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IMP] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
dictyBase:DDB_G0281387 GO:GO:0005634 GenomeReviews:CM000152_GR
GO:GO:0003677 GO:GO:0040011 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 EMBL:AAFI02000041 eggNOG:COG5068 SUPFAM:SSF55455
HSSP:P11831 GO:GO:0031154 GO:GO:0042244 GO:GO:0031247 KO:K12412
GO:GO:0031289 EMBL:AJ224893 RefSeq:XP_640674.1
ProteinModelPortal:Q54TY7 SMR:Q54TY7 STRING:Q54TY7
EnsemblProtists:DDB0214892 GeneID:8623058 KEGG:ddi:DDB_G0281387
OMA:ASPNQFN ProtClustDB:CLSZ2430546 Uniprot:Q54TY7
Length = 418
Score = 105 (42.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 4 IENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVANRFL 63
I+++ R ITFSKR +GI +K EL TLT + + LV S++G ++F ++ + R
Sbjct: 77 IDDKSRRHITFSKRKAGIMKKAYELSTLTGTQVLLLVASETGHVYTFATAKLQPLITRPE 136
Query: 64 GLN 66
G N
Sbjct: 137 GKN 139
Score = 33 (16.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 6/27 (22%), Positives = 16/27 (59%)
Query: 68 QMRKRKETQPRWWETPVYEFNHQELLQ 94
Q +++++ Q + + + + Q+LLQ
Sbjct: 238 QQQQQQQQQQQQQQQQLQQLQQQQLLQ 264
>UNIPROTKB|Q03378 [details] [associations]
symbol:GLO "Floral homeotic protein GLOBOSA" species:4151
"Antirrhinum majus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0007275 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 EMBL:X68831 PIR:S28062
ProteinModelPortal:Q03378 IntAct:Q03378 Uniprot:Q03378
Length = 215
Score = 112 (44.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAV 58
+K+IEN R +T+SKR +GI +K E+ L + ++ ++F+ SGK F +PS V
Sbjct: 8 IKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLV 65
>UNIPROTKB|Q9ATF2 [details] [associations]
symbol:FBP5 "MADS-box transcription factor FBP5"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AF335235 ProteinModelPortal:Q9ATF2 IntAct:Q9ATF2
Uniprot:Q9ATF2
Length = 246
Score = 113 (44.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS 54
+KKIEN+ R +TF+KR +G+ +K EL L + +A ++FS GK + F + S
Sbjct: 8 LKKIENKINRQVTFAKRRNGLLKKAYELSVLCEAEVALIIFSNRGKLYEFSSTS 61
>SGD|S000004645 [details] [associations]
symbol:ARG80 "Transcription factor involved in regulating
arginine-responsive genes" species:4932 "Saccharomyces cerevisiae"
[GO:0000987 "core promoter proximal region sequence-specific DNA
binding" evidence=IDA;IMP] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006525 "arginine
metabolic process" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000982 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IC;ISA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:1900081 "regulation of arginine
catabolic process" evidence=IMP] [GO:1900079 "regulation of
arginine biosynthetic process" evidence=IMP] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 SGD:S000004645 GO:GO:0005634 GO:GO:0045944
EMBL:BK006946 GO:GO:0000987 GO:GO:0000982 eggNOG:COG5068
SUPFAM:SSF55455 EMBL:Z48502 GO:GO:0006525 EMBL:X05327 EMBL:AY692845
PIR:S05822 RefSeq:NP_013756.1 ProteinModelPortal:P07249 SMR:P07249
DIP:DIP-2404N IntAct:P07249 MINT:MINT-543861 STRING:P07249
EnsemblFungi:YMR042W GeneID:855059 KEGG:sce:YMR042W CYGD:YMR042w
GeneTree:ENSGT00400000022158 KO:K09265 OrthoDB:EOG4P2TC4
NextBio:978312 Genevestigator:P07249 GermOnline:YMR042W
GO:GO:1900079 GO:GO:1900081 Uniprot:P07249
Length = 177
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAV 58
++ IEN+ R +TFSKR GI +K EL LT + I L+ + SG ++F P +E V
Sbjct: 85 IRYIENKTRRHVTFSKRRHGIMKKAYELSVLTGANILLLILANSGLVYTFTTPKLEPV 142
>TAIR|locus:2206081 [details] [associations]
symbol:AGL56 "AGAMOUS-like-56" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC018908 SUPFAM:SSF55455
HOGENOM:HOG000152226 ProtClustDB:CLSN2681823 IPI:IPI00546893
PIR:C96634 RefSeq:NP_176285.1 UniGene:At.52294
ProteinModelPortal:Q9C963 SMR:Q9C963 IntAct:Q9C963 STRING:Q9C963
EnsemblPlants:AT1G60880.1 GeneID:842380 KEGG:ath:AT1G60880
TAIR:At1g60880 eggNOG:NOG309414 OMA:ANQDNRS PhylomeDB:Q9C963
Genevestigator:Q9C963 Uniprot:Q9C963
Length = 201
Score = 109 (43.4 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 29/112 (25%), Positives = 61/112 (54%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLT----VSAIARLVFSQSGKPF-SFGNPSI 55
+KKI N+ + + F+KR G++RK S+L L+ ++ +A + S+S F SFG+ S+
Sbjct: 10 IKKIINKPAKTVAFTKRREGLFRKASQLCLLSPATQIAILAAPMTSKSHASFYSFGHSSV 69
Query: 56 EAVANRFLGLNCQMRKRKETQPR---WWETPVYEFNHQELLQMDATIDNLSR 104
+ V + L + + ++ + WWE ++ + + + ++ +D +SR
Sbjct: 70 DNVVSSLLYDHPPLTANQDNRSGLGFWWEDKRFDVS-ENVEELKEAVDAVSR 120
>TAIR|locus:2030621 [details] [associations]
symbol:AGL104 "AGAMOUS-like 104" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009555 "pollen development" evidence=IGI] [GO:0009827
"plant-type cell wall modification" evidence=RCA] [GO:0009860
"pollen tube growth" evidence=RCA] [GO:0010584 "pollen exine
formation" evidence=RCA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
HSSP:Q02078 EMBL:AC069252 ProtClustDB:CLSN2679793 EMBL:DQ056457
IPI:IPI00546953 PIR:A86354 RefSeq:NP_173632.1 UniGene:At.41619
ProteinModelPortal:Q9LM46 SMR:Q9LM46 STRING:Q9LM46
EnsemblPlants:AT1G22130.1 GeneID:838818 KEGG:ath:AT1G22130
TAIR:At1g22130 HOGENOM:HOG000242882 InParanoid:Q9LM46 OMA:ERESALY
PhylomeDB:Q9LM46 Genevestigator:Q9LM46 Uniprot:Q9LM46
Length = 335
Score = 114 (45.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSF-GNPSIEAVA 59
+K+IEN R +TFSKR +G+ +K EL L IA ++FS S + F G IE V
Sbjct: 8 IKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSDRLSLFSGKTRIEDVF 67
Query: 60 NRFLGLNCQMRK 71
+RF+ L Q R+
Sbjct: 68 SRFINLPKQERE 79
>UNIPROTKB|Q6Q9I2 [details] [associations]
symbol:MADS15 "MADS-box transcription factor 15"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:AP003759 EMBL:AP004342
ProtClustDB:CLSN2694303 EMBL:AF058698 EMBL:AB003325 EMBL:AF345911
EMBL:AY551920 RefSeq:NP_001058720.1 UniGene:Os.12750
ProteinModelPortal:Q6Q9I2 IntAct:Q6Q9I2
EnsemblPlants:LOC_Os07g01820.3 GeneID:4342214
KEGG:dosa:Os07t0108900-01 KEGG:osa:4342214 Gramene:Q6Q9I2
Uniprot:Q6Q9I2
Length = 267
Score = 112 (44.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR +G+ +K E+ L + +A +VFS GK + + S ++ +
Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>TAIR|locus:2029411 [details] [associations]
symbol:AGL67 "AGAMOUS-like 67" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009686
"gibberellin biosynthetic process" evidence=RCA] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA]
[GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 EMBL:CP002684 GO:GO:0005829
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 IPI:IPI00544332 RefSeq:NP_001117616.1
RefSeq:NP_177918.2 UniGene:At.34362 UniGene:At.52553
ProteinModelPortal:F4I8L6 SMR:F4I8L6 EnsemblPlants:AT1G77950.1
EnsemblPlants:AT1G77950.2 GeneID:844130 KEGG:ath:AT1G77950
OMA:CEANLIN ArrayExpress:F4I8L6 Uniprot:F4I8L6
Length = 252
Score = 111 (44.1 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSF-GNPSIEAVA 59
+K+IE R ITFSKR G+ +K EL TL +A L+FS S + F G IE V
Sbjct: 8 LKRIEKSTNRQITFSKRKKGLIKKAYELSTLCDIDLALLMFSPSDRLCLFSGQTRIEDVL 67
Query: 60 NRFLGLNCQMRK 71
R++ L Q R+
Sbjct: 68 ARYINLPDQERE 79
>TAIR|locus:2177749 [details] [associations]
symbol:AGL31 "AGAMOUS-like 31" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS;TAS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0010048 "vernalization response"
evidence=IMP] [GO:0010221 "negative regulation of vernalization
response" evidence=IMP] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB019236 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0009908 GO:GO:0009910
GO:GO:0010048 ProtClustDB:CLSN2686365 EMBL:AF312667 EMBL:AY141211
EMBL:AY231441 EMBL:AB026633 EMBL:EU980623 EMBL:EU980627
IPI:IPI00535221 IPI:IPI00546742 RefSeq:NP_001078798.1
RefSeq:NP_001119498.1 UniGene:At.49225 ProteinModelPortal:Q9FPN7
SMR:Q9FPN7 STRING:Q9FPN7 EnsemblPlants:AT5G65050.3 GeneID:836629
KEGG:ath:AT5G65050 GeneFarm:3558 TAIR:At5g65050 InParanoid:Q9FPN7
OMA:SVLCESS PhylomeDB:Q9FPN7 Genevestigator:Q9FPN7 GO:GO:0010221
Uniprot:Q9FPN7
Length = 196
Score = 108 (43.1 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPF-SFGNPSIEAVA 59
+K+IEN+ R +TFSKR +G+ K +L L S+IA LV S SGK + S ++ +
Sbjct: 8 IKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKII 67
Query: 60 NRF 62
+R+
Sbjct: 68 DRY 70
>TAIR|locus:2044259 [details] [associations]
symbol:SEP4 "SEPALLATA 4" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0010076 "maintenance of floral meristem identity"
evidence=IMP] [GO:0048440 "carpel development" evidence=RCA;IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048443 "stamen development"
evidence=IMP] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048443 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0010076 EMBL:U81369 EMBL:AY141229
EMBL:AC006836 EMBL:AY063894 EMBL:AY096386 IPI:IPI00517975
IPI:IPI00518345 IPI:IPI00527847 PIR:S57793 RefSeq:NP_178466.1
RefSeq:NP_849930.1 RefSeq:NP_973411.1 UniGene:At.10200
ProteinModelPortal:P29383 SMR:P29383 IntAct:P29383 STRING:P29383
EnsemblPlants:AT2G03710.1 GeneID:814898 KEGG:ath:AT2G03710
GeneFarm:3499 TAIR:At2g03710 InParanoid:P29383 OMA:EIALLIF
PhylomeDB:P29383 ProtClustDB:CLSN2683849 Genevestigator:P29383
GO:GO:0048440 GO:GO:0048441 GO:GO:0048442 Uniprot:P29383
Length = 258
Score = 111 (44.1 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSF-GNPS 54
+K+IEN+ R +TF+KR +G+ +K EL L + IA L+FS GK + F +PS
Sbjct: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPS 62
>TAIR|locus:2034949 [details] [associations]
symbol:AGL65 "AGAMOUS-like 65" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0009555 "pollen
development" evidence=IGI] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009555 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11831
HOGENOM:HOG000243910 EMBL:AY143172 IPI:IPI00527848
RefSeq:NP_173310.2 UniGene:At.41782 ProteinModelPortal:Q7X9I0
SMR:Q7X9I0 IntAct:Q7X9I0 STRING:Q7X9I0 EnsemblPlants:AT1G18750.1
GeneID:838457 KEGG:ath:AT1G18750 TAIR:At1g18750 InParanoid:Q7X9I0
OMA:CIEEVIS PhylomeDB:Q7X9I0 ProtClustDB:CLSN2680713
ArrayExpress:Q7X9I0 Genevestigator:Q7X9I0 Uniprot:Q7X9I0
Length = 389
Score = 113 (44.8 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 38/111 (34%), Positives = 60/111 (54%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSF-GNPS-IEAV 58
+K++E+ R +T++KR +GI +K EL L I L+FS +G+ +F G S IE V
Sbjct: 8 IKRLESTSNRQVTYTKRKNGILKKAKELSILCDIDIVLLMFSPTGRATAFHGEHSCIEEV 67
Query: 59 ANRFLGLNCQMR-KRK----ETQPRWWETPVYEFN-HQELLQMDATIDNLS 103
++F L Q R KRK E + ++ ++ N H L + TI+ LS
Sbjct: 68 ISKFAQLTPQERTKRKLESLEALKKTFKKLDHDVNIHDFLGARNQTIEGLS 118
>UNIPROTKB|Q6EUV7 [details] [associations]
symbol:grcd2 "MADS domain protein" species:18101 "Gerbera
hybrid cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:AJ784156
ProteinModelPortal:Q6EUV7 IntAct:Q6EUV7 Uniprot:Q6EUV7
Length = 247
Score = 109 (43.4 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS 54
+K+IEN+ R +TF+KR +G+ +K EL L + +A ++FS GK F F + S
Sbjct: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLFEFCSTS 61
>UNIPROTKB|D2T2F9 [details] [associations]
symbol:grcd5 "GRCD5 protein" species:18101 "Gerbera hybrid
cultivar" [GO:0005515 "protein binding" evidence=IPI] [GO:0042802
"identical protein binding" evidence=IPI] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 EMBL:FN297861 IntAct:D2T2F9 Uniprot:D2T2F9
Length = 252
Score = 109 (43.4 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 31/106 (29%), Positives = 53/106 (50%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSF-GNPSIEAVA 59
+K+IEN+ R +TF+KR +G+ +K EL L + +A ++FS GK + F + S+
Sbjct: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL 67
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRT 105
R+ C +T E + QE L++ A + L R+
Sbjct: 68 ERYQ--KCNYGAPDQTNVSAREALELS-SQQEYLKLKARYEALQRS 110
>UNIPROTKB|Q9ZS26 [details] [associations]
symbol:gglo1 "MADS-box protein, GGLO1" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AJ009726 ProteinModelPortal:Q9ZS26 IntAct:Q9ZS26
Uniprot:Q9ZS26
Length = 197
Score = 106 (42.4 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAV 58
+K+IEN R +T+SKR +GI +K E+ L + ++ +++ SGK + + +P +
Sbjct: 8 IKRIENTSNRQVTYSKRKNGIIKKAKEITVLCDANVSLVIYGSSGKMYEYCSPKTNLI 65
>UNIPROTKB|Q2QW53 [details] [associations]
symbol:MADS13 "MADS-box transcription factor 13"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048283 "indeterminate inflorescence morphogenesis"
evidence=IMP] [GO:0048481 "ovule development" evidence=IMP]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048443 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0048366 GO:GO:0048481 EMBL:DP000011
GO:GO:0048497 EMBL:AF151693 EMBL:AY332475 EMBL:AY551912
RefSeq:NP_001066385.1 UniGene:Os.2345 ProteinModelPortal:Q2QW53
IntAct:Q2QW53 EnsemblPlants:LOC_Os12g10540.1
EnsemblPlants:LOC_Os12g10540.2 EnsemblPlants:LOC_Os12g10540.3
EnsemblPlants:LOC_Os12g10540.4 GeneID:4351753 KEGG:osa:4351753
Gramene:Q2QW53 OMA:NENIYLR ProtClustDB:CLSN2698798 GO:GO:0048283
Uniprot:Q2QW53
Length = 270
Score = 109 (43.4 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN R +TF KR +G+ +K EL L + +A +VFS G+ + + N + ++A
Sbjct: 8 IKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATI 67
Query: 60 NRF 62
+R+
Sbjct: 68 DRY 70
>TAIR|locus:2193922 [details] [associations]
symbol:AT1G72350 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746 EMBL:AC016529
EMBL:AY141235 EMBL:DQ446421 EMBL:BT025647 IPI:IPI00525774
PIR:D96747 RefSeq:NP_177379.1 UniGene:At.64898
ProteinModelPortal:Q9C9D4 SMR:Q9C9D4 EnsemblPlants:AT1G72350.1
GeneID:843567 KEGG:ath:AT1G72350 TAIR:At1g72350 InParanoid:Q9C9D4
OMA:NEMAMAD PhylomeDB:Q9C9D4 ProtClustDB:CLSN2679559
ArrayExpress:Q9C9D4 Genevestigator:Q9C9D4 Uniprot:Q9C9D4
Length = 224
Score = 107 (42.7 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 23/63 (36%), Positives = 41/63 (65%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+I E R +TFSKR SG+++K +EL L + I + FS+ + +SFGN + ++ +
Sbjct: 49 IKEIMLETRRQVTFSKRRSGLFKKAAELSVLCGAQIGIITFSRCDRIYSFGN--VNSLID 106
Query: 61 RFL 63
++L
Sbjct: 107 KYL 109
>CGD|CAL0001975 [details] [associations]
symbol:MCM1 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:1900461 "positive regulation of pseudohyphal
growth by positive regulation of transcription from RNA polymerase
II promoter" evidence=IGI;IMP] [GO:2000220 "regulation of
pseudohyphal growth" evidence=IGI;IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001197 "positive regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0031494 "regulation of mating type switching" evidence=IEA]
[GO:0090282 "positive regulation of transcription involved in
G2/M-phase of mitotic cell cycle" evidence=IEA] [GO:0006270 "DNA
replication initiation" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900466 "positive
regulation of arginine biosynthetic process by positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:1900465 "negative regulation of arginine catabolic process by
negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003688 "DNA replication origin
binding" evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0044377 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding, bending" evidence=IEA] [GO:0001133 "sequence-specific
transcription regulatory region DNA binding RNA polymerase II
transcription factor recruiting transcription factor activity"
evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
CGD:CAL0001975 GO:GO:0009405 GO:GO:0003677 GO:GO:0007155
GO:GO:0003700 GO:GO:0006351 GO:GO:0000790 eggNOG:COG5068
SUPFAM:SSF55455 EMBL:AACQ01000024 GO:GO:1900461 GO:GO:0044182
RefSeq:XP_720319.1 RefSeq:XP_888720.1 ProteinModelPortal:Q5AFP3
SMR:Q5AFP3 STRING:Q5AFP3 GeneID:3638050 GeneID:3704001
KEGG:cal:CaO19.7025 KEGG:cal:CaO19_7025 KO:K12412 Uniprot:Q5AFP3
Length = 262
Score = 108 (43.1 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K I+ + R ITFSKR +GI +K EL LT + + LV S++G ++F P ++ +
Sbjct: 65 IKFIQEKSRRHITFSKRKAGIMKKAYELSVLTGTQVLLLVVSETGLVYTFTTPKLQPLVT 124
Query: 61 RFLGLN 66
+ G N
Sbjct: 125 KSEGKN 130
>UNIPROTKB|Q5AFP3 [details] [associations]
symbol:MCM1 "Transcription factor of morphogenesis MCM1"
species:237561 "Candida albicans SC5314" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900461 "positive regulation of pseudohyphal
growth by positive regulation of transcription from RNA polymerase
II promoter" evidence=IGI] [GO:2000220 "regulation of pseudohyphal
growth" evidence=IGI] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432 CGD:CAL0001975
GO:GO:0009405 GO:GO:0003677 GO:GO:0007155 GO:GO:0003700
GO:GO:0006351 GO:GO:0000790 eggNOG:COG5068 SUPFAM:SSF55455
EMBL:AACQ01000024 GO:GO:1900461 GO:GO:0044182 RefSeq:XP_720319.1
RefSeq:XP_888720.1 ProteinModelPortal:Q5AFP3 SMR:Q5AFP3
STRING:Q5AFP3 GeneID:3638050 GeneID:3704001 KEGG:cal:CaO19.7025
KEGG:cal:CaO19_7025 KO:K12412 Uniprot:Q5AFP3
Length = 262
Score = 108 (43.1 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K I+ + R ITFSKR +GI +K EL LT + + LV S++G ++F P ++ +
Sbjct: 65 IKFIQEKSRRHITFSKRKAGIMKKAYELSVLTGTQVLLLVVSETGLVYTFTTPKLQPLVT 124
Query: 61 RFLGLN 66
+ G N
Sbjct: 125 KSEGKN 130
>UNIPROTKB|Q9ATF1 [details] [associations]
symbol:FBP9 "MADS-box transcription factor FBP9"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AF335236 ProteinModelPortal:Q9ATF1 IntAct:Q9ATF1
Uniprot:Q9ATF1
Length = 245
Score = 107 (42.7 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 38/141 (26%), Positives = 63/141 (44%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSF-GNPSIEAVA 59
+K+IEN+ R +TF+KR +G+ +K EL L + +A ++FS GK + F S+
Sbjct: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSTSSMMKTL 67
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRTFIAKLNEKTXXXXX 119
++ C Q +T + N+ E L++ A ++ L R+ L E
Sbjct: 68 EKYQ--QCSYASLDPMQSAN-DT---QNNYHEYLRLKARVELLQRSQRNLLGEDLGSLNS 121
Query: 120 XXXPPMYFHHGLGSFPMQFRS 140
+ H L S Q RS
Sbjct: 122 KELEQL--EHQLDSSLKQIRS 140
>TAIR|locus:2166766 [details] [associations]
symbol:TT16 "TRANSPARENT TESTA16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;IMP] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0008360 "regulation of cell shape"
evidence=IMP] [GO:2000029 "regulation of proanthocyanidin
biosynthetic process" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048316 "seed development" evidence=IGI;IMP]
[GO:0048481 "ovule development" evidence=IGI;RCA;IMP] [GO:0080155
"regulation of double fertilization forming a zygote and endosperm"
evidence=IGI] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 UniPathway:UPA00154 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008360 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048316 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0048481 GO:GO:0080155 GO:GO:0009813
EMBL:AB007648 EMBL:AJ318098 EMBL:AY141212 EMBL:BT030048
IPI:IPI00522403 IPI:IPI00535111 RefSeq:NP_001119264.1
RefSeq:NP_197717.3 RefSeq:NP_974823.1 UniGene:At.31019
ProteinModelPortal:Q8RYD9 SMR:Q8RYD9 IntAct:Q8RYD9 STRING:Q8RYD9
EnsemblPlants:AT5G23260.2 GeneID:832390 KEGG:ath:AT5G23260
GeneFarm:3507 TAIR:At5g23260 InParanoid:Q8RYD9 OMA:IENQTAR
PhylomeDB:Q8RYD9 ProtClustDB:CLSN2681063 ArrayExpress:Q8RYD9
Genevestigator:Q8RYD9 GermOnline:AT5G23260 GO:GO:2000029
Uniprot:Q8RYD9
Length = 252
Score = 107 (42.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS--IEAV 58
+KKIEN+ R +TFSKR +G+ +K EL L + I +VFS +GK F + + +
Sbjct: 8 IKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQL 67
Query: 59 ANRFLGLN 66
+R+L N
Sbjct: 68 IDRYLHTN 75
>UNIPROTKB|Q03489 [details] [associations]
symbol:FBP2 "Agamous-like MADS-box protein AGL9 homolog"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 EMBL:M91666 PIR:JQ1690
ProteinModelPortal:Q03489 IntAct:Q03489 Uniprot:Q03489
Length = 241
Score = 106 (42.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS 54
+K+IEN+ R +TF+KR +G+ +K EL L + +A ++FS GK + F + S
Sbjct: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 61
>TAIR|locus:2096164 [details] [associations]
symbol:AP3 "APETALA 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009827 "plant-type cell wall modification"
evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0010093 "specification of floral organ identity" evidence=RCA]
[GO:0048440 "carpel development" evidence=RCA] [GO:0048441 "petal
development" evidence=RCA] [GO:0048443 "stamen development"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
[GO:0048507 "meristem development" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005739 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0009908 KO:K09264 EMBL:M86357
EMBL:D21125 EMBL:AF115798 EMBL:AF115799 EMBL:AF115800 EMBL:AF115801
EMBL:AF115802 EMBL:AF115803 EMBL:AF115804 EMBL:AF115805
EMBL:AF115806 EMBL:AF115807 EMBL:AF115808 EMBL:AF115809
EMBL:AF115810 EMBL:AF115811 EMBL:AF115812 EMBL:AF115813
EMBL:AF115814 EMBL:AL132971 EMBL:AY070397 EMBL:AY142590
EMBL:AY087369 EMBL:AF056541 IPI:IPI00536950 PIR:A42095
RefSeq:NP_191002.1 UniGene:At.287 ProteinModelPortal:P35632
SMR:P35632 IntAct:P35632 STRING:P35632 PaxDb:P35632 PRIDE:P35632
EnsemblPlants:AT3G54340.1 GeneID:824601 KEGG:ath:AT3G54340
GeneFarm:3487 TAIR:At3g54340 InParanoid:P35632 OMA:TEIRQRM
PhylomeDB:P35632 ProtClustDB:CLSN2915651 Genevestigator:P35632
GermOnline:AT3G54340 Uniprot:P35632
Length = 232
Score = 105 (42.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 19/54 (35%), Positives = 36/54 (66%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS 54
+K+IEN+ R +T+SKR +G+++K EL L + ++ ++FS S K + +P+
Sbjct: 8 IKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPN 61
>TAIR|locus:2143261 [details] [associations]
symbol:SEP1 "SEPALLATA1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048481 "ovule development" evidence=RCA;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009827 "plant-type
cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] [GO:0009886 "post-embryonic morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0010093 "specification of floral organ identity" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048507 "meristem development"
evidence=RCA] [GO:0009908 "flower development" evidence=IDA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 KO:K09264 GO:GO:0048481
IPI:IPI00891534 RefSeq:NP_001119230.1 UniGene:At.10163
UniGene:At.49025 ProteinModelPortal:F4KB90 SMR:F4KB90 PRIDE:F4KB90
EnsemblPlants:AT5G15800.2 GeneID:831436 KEGG:ath:AT5G15800
OMA:CSEQITA Uniprot:F4KB90
Length = 262
Score = 106 (42.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS 54
+K+IEN+ R +TF+KR +G+ +K EL L + +A ++FS GK + F + S
Sbjct: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 61
>TAIR|locus:2202420 [details] [associations]
symbol:AGL102 "AGAMOUS-like 102" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066
SMART:SM00432 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11746 EMBL:AC012463 EMBL:AY141241
IPI:IPI00548327 RefSeq:NP_175207.1 UniGene:At.38560
ProteinModelPortal:Q9FZF2 SMR:Q9FZF2 IntAct:Q9FZF2 STRING:Q9FZF2
EnsemblPlants:AT1G47760.1 GeneID:841187 KEGG:ath:AT1G47760
TAIR:At1g47760 HOGENOM:HOG000152598 InParanoid:Q9FZF2 OMA:VVERIQN
PhylomeDB:Q9FZF2 ProtClustDB:CLSN2914527 Genevestigator:Q9FZF2
Uniprot:Q9FZF2
Length = 184
Score = 102 (41.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K IE+ R TFS+R +GI++K EL L IA LV S + P+++G P V
Sbjct: 8 IKFIEDSIERKATFSRRRNGIFKKADELAKLCNVEIAVLVISPTNIPYTYGYPCFNDVVE 67
Query: 61 R 61
R
Sbjct: 68 R 68
>TAIR|locus:2076522 [details] [associations]
symbol:SEP2 "SEPALLATA 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009908 "flower development" evidence=NAS]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0048481 "ovule development" evidence=RCA;IMP] [GO:0009827
"plant-type cell wall modification" evidence=RCA] [GO:0009860
"pollen tube growth" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010048 "vernalization response"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
[GO:0048507 "meristem development" evidence=RCA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC009755
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0048481
OMA:GKEHILL EMBL:M55552 IPI:IPI00538112 PIR:D39534
RefSeq:NP_186880.1 UniGene:At.41155 ProteinModelPortal:P29384
SMR:P29384 IntAct:P29384 STRING:P29384 PaxDb:P29384
EnsemblPlants:AT3G02310.1 GeneID:821151 KEGG:ath:AT3G02310
GeneFarm:3496 TAIR:At3g02310 InParanoid:P29384 PhylomeDB:P29384
ProtClustDB:CLSN2685196 Genevestigator:P29384 Uniprot:P29384
Length = 250
Score = 104 (41.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS 54
+K+IEN+ R +TF+KR +G+ +K EL L + ++ +VFS GK + F + S
Sbjct: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTS 61
>TAIR|locus:2144345 [details] [associations]
symbol:MAF3 "MADS AFFECTING FLOWERING 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0010048 "vernalization response"
evidence=IEP] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 GO:GO:0009910
GO:GO:0010048 HSSP:P11746 ProtClustDB:CLSN2686365 EMBL:AB026633
EMBL:AY231445 EMBL:EU980617 EMBL:EU980619 EMBL:EU980621
EMBL:EU980626 IPI:IPI00517424 RefSeq:NP_201311.1 UniGene:At.21040
ProteinModelPortal:Q9LSR7 SMR:Q9LSR7 EnsemblPlants:AT5G65060.1
GeneID:836630 KEGG:ath:AT5G65060 TAIR:At5g65060 InParanoid:Q9LSR7
OMA:GMARENG PhylomeDB:Q9LSR7 Genevestigator:Q9LSR7 Uniprot:Q9LSR7
Length = 196
Score = 101 (40.6 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 32/121 (26%), Positives = 61/121 (50%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPF-SFGNPSIEAVA 59
+K+IEN+ R +TFSKR G+ K +L L S+IA + S SGK + S ++ +
Sbjct: 8 IKRIENKSSRQVTFSKRRKGLIEKARQLSILCESSIAVVAVSGSGKLYDSASGDNMSKII 67
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEF-NHQELLQM------DATIDNLSRTFIAKLNE 112
+R+ ++ E + + + H+ELL++ ++ +DN+S + + E
Sbjct: 68 DRY-----EIHHADELKALDLAEKIRNYLPHKELLEIVQSKLEESNVDNVSVDSLISMEE 122
Query: 113 K 113
+
Sbjct: 123 Q 123
>WB|WBGene00006844 [details] [associations]
symbol:unc-120 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0030163 "protein catabolic process"
evidence=IMP] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006355 GO:GO:0003677 GO:GO:0040011
GO:GO:0000003 GO:GO:0006351 GO:GO:0030163 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11831 GeneTree:ENSGT00400000022158
EMBL:Z75710 PIR:T20313 RefSeq:NP_492296.1 ProteinModelPortal:Q18955
SMR:Q18955 DIP:DIP-26080N MINT:MINT-1058826 STRING:Q18955
PaxDb:Q18955 EnsemblMetazoa:D1081.2 GeneID:172636
KEGG:cel:CELE_D1081.2 UCSC:D1081.2 CTD:172636 WormBase:D1081.2
HOGENOM:HOG000019738 InParanoid:Q18955 OMA:NGGNGMR NextBio:876363
Uniprot:Q18955
Length = 327
Score = 104 (41.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
M+ I N+ R TFSKR +GI +K EL TLT + + LV S++G +++ P ++ + +
Sbjct: 52 MEYINNKLRRYTTFSKRKTGIMKKAFELSTLTGTQVMLLVASETGHVYTYATPKLQPMIS 111
Query: 61 RFLG 64
G
Sbjct: 112 SDTG 115
>TAIR|locus:2057741 [details] [associations]
symbol:AGL33 "AGAMOUS-like 33" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000155301 SUPFAM:SSF55455
HSSP:Q02078 EMBL:AC004484 EMBL:AY141233 IPI:IPI00538668 PIR:A84659
RefSeq:NP_180200.1 UniGene:At.38911 ProteinModelPortal:O64840
SMR:O64840 PRIDE:O64840 EnsemblPlants:AT2G26320.1 GeneID:817172
KEGG:ath:AT2G26320 TAIR:At2g26320 eggNOG:NOG276411
InParanoid:O64840 OMA:FHTILER PhylomeDB:O64840
ProtClustDB:CLSN2913018 ArrayExpress:O64840 Genevestigator:O64840
Uniprot:O64840
Length = 109
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKP--FSFGNPSIEAV 58
+K+IE+ R FSKR G+++K E+ L S I +V S + KP F+ + S +
Sbjct: 24 LKRIESLKERSSKFSKRKKGLFKKAEEVALLCDSDIMLIVVSPTEKPTVFNTRSRSFHTI 83
Query: 59 ANRFLGLNCQMRKRK 73
RF L+ Q R+ +
Sbjct: 84 LERFCMLSLQEREER 98
>DICTYBASE|DDB_G0282835 [details] [associations]
symbol:srfB "putative MADS-box transcription factor"
species:44689 "Dictyostelium discoideum" [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0019933
"cAMP-mediated signaling" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 dictyBase:DDB_G0282835 GO:GO:0005634
EMBL:AAFI02000047 GenomeReviews:CM000152_GR GO:GO:0019933
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11831 ProtClustDB:CLSZ2430546
RefSeq:XP_639351.1 ProteinModelPortal:Q54RY6 SMR:Q54RY6
PRIDE:Q54RY6 EnsemblProtists:DDB0220492 GeneID:8623792
KEGG:ddi:DDB_G0282835 OMA:WSTASSC Uniprot:Q54RY6
Length = 467
Score = 104 (41.7 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 4 IENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVANR 61
I ++ R ITFSKR SGI +K EL TLT + + +V S++G ++F P ++ + +
Sbjct: 46 IGDKSRRHITFSKRKSGIMKKAYELSTLTGTQVLLIVASETGHVYTFATPKLQPLITK 103
>TAIR|locus:2824536 [details] [associations]
symbol:AGL12 "AGAMOUS-like 12" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0006826 "iron ion transport"
evidence=RCA] [GO:0010106 "cellular response to iron ion
starvation" evidence=RCA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0015706 "nitrate transport" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048527 "lateral
root development" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048364 EMBL:U20193 EMBL:AC012654 EMBL:AC016163
EMBL:BT006157 EMBL:BT008332 EMBL:BT008524 IPI:IPI00543643
PIR:H96738 RefSeq:NP_565022.1 UniGene:At.19719
ProteinModelPortal:Q38841 SMR:Q38841 IntAct:Q38841 STRING:Q38841
PRIDE:Q38841 EnsemblPlants:AT1G71692.1 GeneID:843497
KEGG:ath:AT1G71692 GeneFarm:3512 TAIR:At1g71692 eggNOG:COG5068
HOGENOM:HOG000155301 InParanoid:Q38841 OMA:HLEYWIS PhylomeDB:Q38841
ProtClustDB:CLSN2689145 Genevestigator:Q38841 GermOnline:AT1G71692
GO:GO:0010228 SUPFAM:SSF55455 Uniprot:Q38841
Length = 211
Score = 98 (39.6 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNP-SIEAVA 59
+K+IEN R +TF KR +G+ +K EL L + I ++FS GK F ++E +
Sbjct: 8 LKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMI 67
Query: 60 NRFL 63
++++
Sbjct: 68 DKYM 71
>TAIR|locus:2158039 [details] [associations]
symbol:AT5G49420 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
EMBL:CP002688 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:Q02078 EMBL:AY141239 EMBL:DQ447056
IPI:IPI00521941 RefSeq:NP_199753.3 UniGene:At.64280
ProteinModelPortal:Q7X9H5 SMR:Q7X9H5 IntAct:Q7X9H5 STRING:Q7X9H5
PRIDE:Q7X9H5 EnsemblPlants:AT5G49420.1 GeneID:835002
KEGG:ath:AT5G49420 TAIR:At5g49420 PhylomeDB:Q7X9H5
ProtClustDB:CLSN2687118 Genevestigator:Q7X9H5 Uniprot:Q7X9H5
Length = 334
Score = 100 (40.3 bits), Expect = 0.00011, P = 0.00011
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVF---SQSGKPF-SFGNPSIE 56
++ I+ D +T +KR G+Y K S+L L+ + IA L S+S F SFG+ S++
Sbjct: 13 IETIQKRDSLRVTCTKRREGLYSKASQLCLLSDAQIAILATPPSSESNVSFYSFGHSSVD 72
Query: 57 AVANRFL-GLNCQMRKRKETQ 76
AV + FL G + KET+
Sbjct: 73 AVVSAFLSGQRPVPKDNKETR 93
>UNIPROTKB|H0YKY6 [details] [associations]
symbol:MEF2A "Myocyte-specific enhancer factor 2A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000002 "mitochondrial genome
maintenance" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048311 "mitochondrion distribution"
evidence=IEA] [GO:0055005 "ventricular cardiac myofibril
development" evidence=IEA] [GO:0061337 "cardiac conduction"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455
EMBL:AC022692 EMBL:AC015660 EMBL:AC103967 HGNC:HGNC:6993
Ensembl:ENST00000559903 Bgee:H0YKY6 Uniprot:H0YKY6
Length = 77
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 3 KIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVANRF 62
+I +E R +TF+KR G+ +K EL L IA ++F+ S K F + + ++ V ++
Sbjct: 10 RIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKY 69
Query: 63 LGLN 66
N
Sbjct: 70 TEYN 73
>UNIPROTKB|H0YM62 [details] [associations]
symbol:MEF2A "Myocyte-specific enhancer factor 2A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000002 "mitochondrial genome
maintenance" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048311 "mitochondrion distribution"
evidence=IEA] [GO:0055005 "ventricular cardiac myofibril
development" evidence=IEA] [GO:0061337 "cardiac conduction"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455
EMBL:AC022692 EMBL:AC015660 EMBL:AC103967 HGNC:HGNC:6993
Ensembl:ENST00000560493 Bgee:H0YM62 Uniprot:H0YM62
Length = 85
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 3 KIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVANRF 62
+I +E R +TF+KR G+ +K EL L IA ++F+ S K F + + ++ V ++
Sbjct: 10 RIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKY 69
Query: 63 LGLN 66
N
Sbjct: 70 TEYN 73
>UNIPROTKB|I3L7L3 [details] [associations]
symbol:LOC100738718 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 SUPFAM:SSF55455 GeneTree:ENSGT00390000011828
EMBL:CU618336 Ensembl:ENSSSCT00000024093 OMA:SMGRKKI Uniprot:I3L7L3
Length = 94
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 3 KIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVANRF 62
+I +E R +TF+KR G+ +K EL L IA ++F+ S K F + + ++ V ++
Sbjct: 10 RIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKY 69
Query: 63 LGLN 66
N
Sbjct: 70 TEYN 73
>DICTYBASE|DDB_G0268920 [details] [associations]
symbol:srfC "putative MADS-box transcription factor"
species:44689 "Dictyostelium discoideum" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 dictyBase:DDB_G0268920 GO:GO:0005634
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AAFI02000004 eggNOG:COG5068 SUPFAM:SSF55455 HSSP:Q02078
KO:K09265 RefSeq:XP_646833.1 ProteinModelPortal:Q55F37 SMR:Q55F37
EnsemblProtists:DDB0220491 GeneID:8616515 KEGG:ddi:DDB_G0268920
InParanoid:Q55F37 OMA:SIAWPFV Uniprot:Q55F37
Length = 1050
Score = 105 (42.0 bits), Expect = 0.00015, P = 0.00015
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
++KI NE R TF+KR +G+ +K EL L IA +VFS + K F + + ++ +
Sbjct: 10 IEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNKLFQYSSRDMDKLLI 69
Query: 61 RFLGLNCQMRKRKETQ 76
R+ RK Q
Sbjct: 70 RYTDNTDNTRKNLTNQ 85
>ZFIN|ZDB-GENE-040426-1294 [details] [associations]
symbol:srfl "serum response factor like"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 ZFIN:ZDB-GENE-040426-1294
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
eggNOG:COG5068 SUPFAM:SSF55455 HSSP:P11831 OrthoDB:EOG48KRCZ
EMBL:BC057414 IPI:IPI00498001 RefSeq:NP_956925.1 UniGene:Dr.88333
ProteinModelPortal:Q6PFU5 SMR:Q6PFU5 PRIDE:Q6PFU5 GeneID:393604
KEGG:dre:393604 CTD:393604 NextBio:20814621 Uniprot:Q6PFU5
Length = 314
Score = 98 (39.6 bits), Expect = 0.00017, P = 0.00017
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIE 56
M+ I+N+ R TFSKR +GI +K EL TLT + + LV S++G ++F ++
Sbjct: 163 MEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ 218
>FB|FBgn0004101 [details] [associations]
symbol:bs "blistered" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007424 "open tracheal
system development" evidence=IEP;NAS;TAS] [GO:0007430 "terminal
branching, open tracheal system" evidence=NAS;IMP;TAS] [GO:0007475
"apposition of dorsal and ventral imaginal disc-derived wing
surfaces" evidence=IMP] [GO:0035220 "wing disc development"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=NAS;IMP;TAS] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0035209 "pupal development"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0045165 "cell fate commitment" evidence=TAS] [GO:0035154
"terminal cell fate specification, open tracheal system"
evidence=TAS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IPI] [GO:0008586
"imaginal disc-derived wing vein morphogenesis" evidence=IMP]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030431 "sleep"
evidence=IMP] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 EMBL:AE013599
GO:GO:0005634 GO:GO:0003677 GO:GO:0030431 GO:GO:0008586
GO:GO:0045944 GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455
GeneTree:ENSGT00400000022158 GO:GO:0007475 ChiTaRS:BLM
GO:GO:0002168 GO:GO:0007430 GO:GO:0035209 EMBL:X77532 EMBL:AY095071
PIR:S42825 RefSeq:NP_726438.1 UniGene:Dm.3381
ProteinModelPortal:Q24535 SMR:Q24535 STRING:Q24535 PaxDb:Q24535
EnsemblMetazoa:FBtr0072271 GeneID:37890 KEGG:dme:Dmel_CG3411
CTD:12213 FlyBase:FBgn0004101 InParanoid:Q24535 OrthoDB:EOG4T76KF
PhylomeDB:Q24535 GenomeRNAi:37890 NextBio:805887 Bgee:Q24535
GermOnline:CG3411 GO:GO:0035154 Uniprot:Q24535
Length = 449
Score = 100 (40.3 bits), Expect = 0.00018, P = 0.00018
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGN----PSIE 56
M+ I+N+ R TFSKR +GI +K EL TLT + + LV S++G ++F P I
Sbjct: 172 MEYIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMIT 231
Query: 57 AVANRFLGLNC 67
+ A + L C
Sbjct: 232 SEAGKQLIQTC 242
>TAIR|locus:2199444 [details] [associations]
symbol:AGL85 "AGAMOUS-like 85" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR002100 Pfam:PF00319 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC005388 SUPFAM:SSF55455
HOGENOM:HOG000238700 eggNOG:KOG0014 ProtClustDB:CLSN2679626
IPI:IPI00521245 PIR:F96589 RefSeq:NP_175874.1 UniGene:At.52205
ProteinModelPortal:Q9ZVL8 SMR:Q9ZVL8 EnsemblPlants:AT1G54760.1
GeneID:841917 KEGG:ath:AT1G54760 TAIR:At1g54760 PhylomeDB:Q9ZVL8
Genevestigator:Q9ZVL8 Uniprot:Q9ZVL8
Length = 161
Score = 95 (38.5 bits), Expect = 0.00018, P = 0.00018
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 26 SELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVANRFL 63
+EL L + +A L +S SGKP++FG+PS +AVA RFL
Sbjct: 19 NELSILCGAEVAFLGYSCSGKPYTFGSPSFQAVAERFL 56
>UNIPROTKB|Q90718 [details] [associations]
symbol:SRF "Serum response factor" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
GO:GO:0007275 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455 EMBL:U50596
IPI:IPI00594362 UniGene:Gga.2013 ProteinModelPortal:Q90718
SMR:Q90718 STRING:Q90718 HOGENOM:HOG000012380 HOVERGEN:HBG014968
InParanoid:Q90718 OrthoDB:EOG48KRCZ Uniprot:Q90718
Length = 375
Score = 98 (39.6 bits), Expect = 0.00022, P = 0.00022
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIE 56
M+ I+N+ R TFSKR +GI +K EL TLT + + LV S++G ++F ++
Sbjct: 15 MEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ 70
>UNIPROTKB|D6RB91 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455 InterPro:IPR022102
Pfam:PF12347 EMBL:AC008525 EMBL:AC008835 HGNC:HGNC:6996
ChiTaRS:MEF2C IPI:IPI00967652 ProteinModelPortal:D6RB91 SMR:D6RB91
Ensembl:ENST00000507984 HOGENOM:HOG000197845 ArrayExpress:D6RB91
Bgee:D6RB91 Uniprot:D6RB91
Length = 120
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 3 KIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVANRF 62
+I +E R +TF+KR G+ +K EL L IA ++F+ + K F + + ++ V ++
Sbjct: 10 RIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKY 69
Query: 63 LGLN 66
N
Sbjct: 70 TEYN 73
>UNIPROTKB|D6RG14 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000165 "MAPK cascade" evidence=IEA]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IEA] [GO:0000987 "core promoter proximal
region sequence-specific DNA binding" evidence=IEA] [GO:0001046
"core promoter sequence-specific DNA binding" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001782 "B cell
homeostasis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0002062
"chondrocyte differentiation" evidence=IEA] [GO:0002467 "germinal
center formation" evidence=IEA] [GO:0002634 "regulation of germinal
center formation" evidence=IEA] [GO:0003138 "primary heart field
specification" evidence=IEA] [GO:0003139 "secondary heart field
specification" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003185 "sinoatrial valve
morphogenesis" evidence=IEA] [GO:0003211 "cardiac ventricle
formation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0007521 "muscle cell
fate determination" evidence=IEA] [GO:0007611 "learning or memory"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0010694 "positive regulation of alkaline
phosphatase activity" evidence=IEA] [GO:0014033 "neural crest cell
differentiation" evidence=IEA] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0030220 "platelet
formation" evidence=IEA] [GO:0030224 "monocyte differentiation"
evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0030501 "positive regulation of bone
mineralization" evidence=IEA] [GO:0030890 "positive regulation of B
cell proliferation" evidence=IEA] [GO:0033197 "response to vitamin
E" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IEA] [GO:0035984 "cellular response to trichostatin A"
evidence=IEA] [GO:0042100 "B cell proliferation" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045652 "regulation of megakaryocyte differentiation"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050853 "B cell
receptor signaling pathway" evidence=IEA] [GO:0051145 "smooth
muscle cell differentiation" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060025 "regulation of
synaptic activity" evidence=IEA] [GO:0060045 "positive regulation
of cardiac muscle cell proliferation" evidence=IEA] [GO:0060297
"regulation of sarcomere organization" evidence=IEA] [GO:0060536
"cartilage morphogenesis" evidence=IEA] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IEA] [GO:0071277 "cellular
response to calcium ion" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0071333 "cellular
response to glucose stimulus" evidence=IEA] [GO:0071498 "cellular
response to fluid shear stress" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071864 "positive regulation of
cell proliferation in bone marrow" evidence=IEA] [GO:0072102
"glomerulus morphogenesis" evidence=IEA] [GO:0072160 "nephron
tubule epithelial cell differentiation" evidence=IEA] [GO:0090073
"positive regulation of protein homodimerization activity"
evidence=IEA] [GO:2000111 "positive regulation of macrophage
apoptotic process" evidence=IEA] [GO:2000727 "positive regulation
of cardiac muscle cell differentiation" evidence=IEA] [GO:2000987
"positive regulation of behavioral fear response" evidence=IEA]
[GO:2001013 "epithelial cell proliferation involved in renal tubule
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0000165
GO:GO:0071277 GO:GO:0043524 GO:GO:0003682 GO:GO:0071222
GO:GO:0003705 GO:GO:0001077 GO:GO:0000122 GO:GO:0007611
GO:GO:0000987 GO:GO:0035690 GO:GO:0048666 GO:GO:0001974
GO:GO:0030890 GO:GO:0010694 GO:GO:0030501 GO:GO:0045669
GO:GO:0051145 GO:GO:0002467 GO:GO:0045666 SUPFAM:SSF55455
GO:GO:0001568 GO:GO:0001947 GO:GO:0006959 GO:GO:0001649
GO:GO:0060021 GO:GO:0002062 GO:GO:0050680 GO:GO:0014898
GO:GO:0035914 GO:GO:0003151 GO:GO:0030318 GO:GO:0000977
GO:GO:0001782 GO:GO:0001046 GO:GO:0050853 GO:GO:0042100
GO:GO:0002634 GO:GO:0060045 GO:GO:0001958 GO:GO:0030224
GO:GO:0003139 GO:GO:2000111 GO:GO:0048703 GO:GO:0060536
GO:GO:0090073 GO:GO:2000987 GO:GO:2000727 GO:GO:0030220
GO:GO:0060025 GO:GO:0071498 GO:GO:0007521 GO:GO:0071864
GO:GO:0045652 GO:GO:0003211 GO:GO:0035984 GO:GO:2001013
GO:GO:0072102 GO:GO:0072160 GO:GO:0014033 GO:GO:0003138
GO:GO:0060297 GO:GO:0003185 GO:GO:0055012 EMBL:AC008525
EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C IPI:IPI00967981
ProteinModelPortal:D6RG14 SMR:D6RG14 Ensembl:ENST00000503075
ArrayExpress:D6RG14 Bgee:D6RG14 Uniprot:D6RG14
Length = 87
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 3 KIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVANRF 62
+I +E R +TF+KR G+ +K EL L IA ++F+ + K F + + ++ V ++
Sbjct: 10 RIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKY 69
Query: 63 LGLN 66
N
Sbjct: 70 TEYN 73
>UNIPROTKB|D6RJA7 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007521
"muscle cell fate determination" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0010629 "negative regulation
of gene expression" evidence=IEA] [GO:0010694 "positive regulation
of alkaline phosphatase activity" evidence=IEA] [GO:0014033 "neural
crest cell differentiation" evidence=IEA] [GO:0014898 "cardiac
muscle hypertrophy in response to stress" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0030220 "platelet
formation" evidence=IEA] [GO:0030224 "monocyte differentiation"
evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0030501 "positive regulation of bone
mineralization" evidence=IEA] [GO:0030890 "positive regulation of B
cell proliferation" evidence=IEA] [GO:0033197 "response to vitamin
E" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IEA] [GO:0035984 "cellular response to trichostatin A"
evidence=IEA] [GO:0042100 "B cell proliferation" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045652 "regulation of megakaryocyte differentiation"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050853 "B cell
receptor signaling pathway" evidence=IEA] [GO:0051145 "smooth
muscle cell differentiation" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060025 "regulation of
synaptic activity" evidence=IEA] [GO:0060045 "positive regulation
of cardiac muscle cell proliferation" evidence=IEA] [GO:0060297
"regulation of sarcomere organization" evidence=IEA] [GO:0060536
"cartilage morphogenesis" evidence=IEA] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IEA] [GO:0071277 "cellular
response to calcium ion" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0071333 "cellular
response to glucose stimulus" evidence=IEA] [GO:0071498 "cellular
response to fluid shear stress" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071864 "positive regulation of
cell proliferation in bone marrow" evidence=IEA] [GO:0072102
"glomerulus morphogenesis" evidence=IEA] [GO:0072160 "nephron
tubule epithelial cell differentiation" evidence=IEA] [GO:0090073
"positive regulation of protein homodimerization activity"
evidence=IEA] [GO:2000111 "positive regulation of macrophage
apoptotic process" evidence=IEA] [GO:2000727 "positive regulation
of cardiac muscle cell differentiation" evidence=IEA] [GO:2000987
"positive regulation of behavioral fear response" evidence=IEA]
[GO:2001013 "epithelial cell proliferation involved in renal tubule
morphogenesis" evidence=IEA] [GO:0000165 "MAPK cascade"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0000987 "core
promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0001649 "osteoblast differentiation" evidence=IEA] [GO:0001782
"B cell homeostasis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0002062
"chondrocyte differentiation" evidence=IEA] [GO:0002467 "germinal
center formation" evidence=IEA] [GO:0002634 "regulation of germinal
center formation" evidence=IEA] [GO:0003138 "primary heart field
specification" evidence=IEA] [GO:0003139 "secondary heart field
specification" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003185 "sinoatrial valve
morphogenesis" evidence=IEA] [GO:0003211 "cardiac ventricle
formation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0000165
GO:GO:0071277 GO:GO:0043524 GO:GO:0003682 GO:GO:0071222
GO:GO:0003705 GO:GO:0001077 GO:GO:0000122 GO:GO:0007611
GO:GO:0000987 GO:GO:0035690 GO:GO:0048666 GO:GO:0001974
GO:GO:0030890 GO:GO:0010694 GO:GO:0030501 GO:GO:0045669
GO:GO:0051145 GO:GO:0002467 GO:GO:0045666 SUPFAM:SSF55455
GO:GO:0001568 GO:GO:0001947 GO:GO:0006959 GO:GO:0001649
GO:GO:0060021 GO:GO:0002062 GO:GO:0050680 GO:GO:0014898
GO:GO:0035914 GO:GO:0003151 GO:GO:0030318 GO:GO:0000977
GO:GO:0001782 GO:GO:0001046 GO:GO:0050853 GO:GO:0042100
GO:GO:0002634 GO:GO:0060045 GO:GO:0001958 GO:GO:0030224
GO:GO:0003139 GO:GO:2000111 GO:GO:0048703 GO:GO:0060536
GO:GO:0090073 GO:GO:2000987 GO:GO:2000727 GO:GO:0030220
GO:GO:0060025 GO:GO:0071498 GO:GO:0007521 GO:GO:0071864
GO:GO:0045652 HOGENOM:HOG000230620 GO:GO:0003211 GO:GO:0035984
GO:GO:2001013 GO:GO:0072102 GO:GO:0072160 GO:GO:0014033
GO:GO:0003138 GO:GO:0060297 GO:GO:0003185 GO:GO:0055012
EMBL:AC008525 EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C
IPI:IPI00964921 ProteinModelPortal:D6RJA7 SMR:D6RJA7
Ensembl:ENST00000502831 ArrayExpress:D6RJA7 Bgee:D6RJA7
Uniprot:D6RJA7
Length = 98
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 3 KIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVANRF 62
+I +E R +TF+KR G+ +K EL L IA ++F+ + K F + + ++ V ++
Sbjct: 10 RIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKY 69
Query: 63 LGLN 66
N
Sbjct: 70 TEYN 73
>MGI|MGI:106658 [details] [associations]
symbol:Srf "serum response factor" species:10090 "Mus
musculus" [GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0000978
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding" evidence=IDA] [GO:0001076 "RNA polymerase II
transcription factor binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO;IDA]
[GO:0001228 "RNA polymerase II transcription regulatory region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001569 "patterning of blood vessels" evidence=IMP] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001707
"mesoderm formation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0001829 "trophectodermal cell differentiation"
evidence=ISO] [GO:0001947 "heart looping" evidence=IMP] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IMP] [GO:0002042
"cell migration involved in sprouting angiogenesis"
evidence=ISO;IMP] [GO:0002521 "leukocyte differentiation"
evidence=IMP] [GO:0003257 "positive regulation of transcription
from RNA polymerase II promoter involved in myocardial precursor
cell differentiation" evidence=ISO;IMP] [GO:0003677 "DNA binding"
evidence=IGI;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IC;IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007015 "actin filament
organization" evidence=IMP] [GO:0007160 "cell-matrix adhesion"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IMP] [GO:0007507
"heart development" evidence=IMP] [GO:0007616 "long-term memory"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0008306 "associative learning"
evidence=IMP] [GO:0009725 "response to hormone stimulus"
evidence=ISO] [GO:0010669 "epithelial structure maintenance"
evidence=IMP] [GO:0010735 "positive regulation of transcription via
serum response element binding" evidence=ISO] [GO:0010736 "serum
response element binding" evidence=ISO;IDA] [GO:0016337 "cell-cell
adhesion" evidence=IMP] [GO:0021766 "hippocampus development"
evidence=IMP] [GO:0022028 "tangential migration from the
subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0030036 "actin cytoskeleton organization" evidence=IMP]
[GO:0030038 "contractile actin filament bundle assembly"
evidence=IMP] [GO:0030155 "regulation of cell adhesion"
evidence=IMP] [GO:0030168 "platelet activation" evidence=IMP]
[GO:0030220 "platelet formation" evidence=IMP] [GO:0030336
"negative regulation of cell migration" evidence=ISO] [GO:0031175
"neuron projection development" evidence=IMP] [GO:0031490
"chromatin DNA binding" evidence=IDA] [GO:0033561 "regulation of
water loss via skin" evidence=IMP] [GO:0034097 "response to
cytokine stimulus" evidence=ISO] [GO:0035855 "megakaryocyte
development" evidence=IMP] [GO:0035912 "dorsal aorta morphogenesis"
evidence=IMP] [GO:0042789 "mRNA transcription from RNA polymerase
II promoter" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043149 "stress fiber assembly"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0043589 "skin morphogenesis" evidence=IMP]
[GO:0045059 "positive thymic T cell selection" evidence=IMP]
[GO:0045214 "sarcomere organization" evidence=IMP] [GO:0045597
"positive regulation of cell differentiation" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP;IDA]
[GO:0045987 "positive regulation of smooth muscle contraction"
evidence=ISO] [GO:0046016 "positive regulation of transcription by
glucose" evidence=ISO] [GO:0046716 "muscle cell homeostasis"
evidence=IMP] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0048821 "erythrocyte development" evidence=IMP] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0051491 "positive regulation of
filopodium assembly" evidence=IMP] [GO:0055003 "cardiac myofibril
assembly" evidence=IMP] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IMP] [GO:0060261 "positive regulation of
transcription initiation from RNA polymerase II promoter"
evidence=ISO] [GO:0060292 "long term synaptic depression"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IMP]
[GO:0060947 "cardiac vascular smooth muscle cell differentiation"
evidence=IMP] [GO:0061029 "eyelid development in camera-type eye"
evidence=IMP] [GO:0070830 "tight junction assembly" evidence=IMP]
[GO:0090009 "primitive streak formation" evidence=IMP] [GO:0090136
"epithelial cell-cell adhesion" evidence=IMP] [GO:0090398 "cellular
senescence" evidence=ISO] [GO:1900222 "negative regulation of
beta-amyloid clearance" evidence=ISO] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 MGI:MGI:106658 GO:GO:0005783 GO:GO:0005737
GO:GO:0021766 GO:GO:0001764 GO:GO:0008285 GO:GO:0030168
GO:GO:0030155 GO:GO:0001701 GO:GO:0034097 GO:GO:0045597
GO:GO:0007616 GO:GO:0003705 GO:GO:0000978 GO:GO:0001077
GO:GO:0030336 GO:GO:0060292 GO:GO:0035855 GO:GO:0000790
GO:GO:0060218 GO:GO:0008306 GO:GO:0046716 GO:GO:0045987
GO:GO:0009725 GO:GO:0055003 GO:GO:0045214 GO:GO:0001707
GO:GO:0001569 GO:GO:0007160 GO:GO:0001829 GO:GO:0048589
eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0051491 GO:GO:0001947
GO:GO:0031175 GO:GO:0048821 GO:GO:0061029 GO:GO:0000983
GO:GO:0070830 GO:GO:0031490 GeneTree:ENSGT00400000022158
GO:GO:0042789 GO:GO:0043149 GO:GO:0001076 GO:GO:0060347
GO:GO:0090398 GO:GO:0003257 GO:GO:0090009 GO:GO:0033561
GO:GO:0090136 GO:GO:0045059 GO:GO:0043589 GO:GO:0010669
GO:GO:0002011 GO:GO:0035912 GO:GO:0002042 GO:GO:0030220
GO:GO:0060947 GO:GO:0060261 GO:GO:0022028 GO:GO:0030038
GO:GO:0010736 GO:GO:0010735 HOGENOM:HOG000012380 HOVERGEN:HBG014968
OrthoDB:EOG48KRCZ CTD:6722 KO:K04378 OMA:MITSDTG EMBL:AB038376
EMBL:BC051950 IPI:IPI00124827 RefSeq:NP_065239.1 UniGene:Mm.45044
ProteinModelPortal:Q9JM73 SMR:Q9JM73 IntAct:Q9JM73 STRING:Q9JM73
PhosphoSite:Q9JM73 PRIDE:Q9JM73 Ensembl:ENSMUST00000015749
GeneID:20807 KEGG:mmu:20807 UCSC:uc008ctg.1 InParanoid:Q9JM73
NextBio:299523 Bgee:Q9JM73 CleanEx:MM_SRF Genevestigator:Q9JM73
GermOnline:ENSMUSG00000015605 Uniprot:Q9JM73
Length = 504
Score = 98 (39.6 bits), Expect = 0.00034, P = 0.00034
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIE 56
M+ I+N+ R TFSKR +GI +K EL TLT + + LV S++G ++F ++
Sbjct: 144 MEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ 199
>RGD|1559787 [details] [associations]
symbol:Srf "serum response factor (c-fos serum response
element-binding transcription factor)" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=ISO] [GO:0001076 "RNA
polymerase II transcription factor binding transcription factor
activity" evidence=ISO] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISO] [GO:0001228 "RNA polymerase II
transcription regulatory region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISO] [GO:0001569 "patterning of blood
vessels" evidence=ISO] [GO:0001666 "response to hypoxia"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001707 "mesoderm formation" evidence=ISO]
[GO:0001764 "neuron migration" evidence=ISO] [GO:0001829
"trophectodermal cell differentiation" evidence=ISO] [GO:0001947
"heart looping" evidence=ISO] [GO:0002011 "morphogenesis of an
epithelial sheet" evidence=ISO] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=ISO] [GO:0002521
"leukocyte differentiation" evidence=ISO] [GO:0003257 "positive
regulation of transcription from RNA polymerase II promoter
involved in myocardial precursor cell differentiation"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007015 "actin filament
organization" evidence=ISO] [GO:0007160 "cell-matrix adhesion"
evidence=ISO] [GO:0007369 "gastrulation" evidence=ISO] [GO:0007507
"heart development" evidence=ISO] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0008306 "associative learning"
evidence=ISO] [GO:0009725 "response to hormone stimulus"
evidence=ISO] [GO:0010669 "epithelial structure maintenance"
evidence=ISO] [GO:0010735 "positive regulation of transcription via
serum response element binding" evidence=ISO] [GO:0010736 "serum
response element binding" evidence=ISO] [GO:0016337 "cell-cell
adhesion" evidence=ISO] [GO:0021766 "hippocampus development"
evidence=ISO] [GO:0022028 "tangential migration from the
subventricular zone to the olfactory bulb" evidence=ISO]
[GO:0030036 "actin cytoskeleton organization" evidence=ISO]
[GO:0030038 "contractile actin filament bundle assembly"
evidence=ISO] [GO:0030155 "regulation of cell adhesion"
evidence=ISO] [GO:0030168 "platelet activation" evidence=ISO]
[GO:0030220 "platelet formation" evidence=ISO] [GO:0030336
"negative regulation of cell migration" evidence=IMP] [GO:0031175
"neuron projection development" evidence=ISO] [GO:0031490
"chromatin DNA binding" evidence=ISO] [GO:0033561 "regulation of
water loss via skin" evidence=ISO] [GO:0034097 "response to
cytokine stimulus" evidence=ISO] [GO:0035855 "megakaryocyte
development" evidence=ISO] [GO:0035912 "dorsal aorta morphogenesis"
evidence=ISO] [GO:0042789 "mRNA transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043149 "stress fiber assembly"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0043589 "skin morphogenesis" evidence=ISO]
[GO:0045059 "positive thymic T cell selection" evidence=ISO]
[GO:0045214 "sarcomere organization" evidence=ISO] [GO:0045597
"positive regulation of cell differentiation" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045987
"positive regulation of smooth muscle contraction" evidence=ISO]
[GO:0046016 "positive regulation of transcription by glucose"
evidence=IMP] [GO:0046716 "muscle cell homeostasis" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0048589 "developmental growth" evidence=ISO] [GO:0048821
"erythrocyte development" evidence=ISO] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0051491 "positive regulation of
filopodium assembly" evidence=ISO] [GO:0055003 "cardiac myofibril
assembly" evidence=ISO] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=ISO] [GO:0060261 "positive regulation of
transcription initiation from RNA polymerase II promoter"
evidence=ISO] [GO:0060292 "long term synaptic depression"
evidence=ISO] [GO:0060347 "heart trabecula formation" evidence=ISO]
[GO:0060947 "cardiac vascular smooth muscle cell differentiation"
evidence=ISO] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISO] [GO:0070830 "tight junction assembly" evidence=ISO]
[GO:0071333 "cellular response to glucose stimulus" evidence=IEP]
[GO:0090009 "primitive streak formation" evidence=ISO] [GO:0090136
"epithelial cell-cell adhesion" evidence=ISO] [GO:0090398 "cellular
senescence" evidence=ISO] [GO:1900222 "negative regulation of
beta-amyloid clearance" evidence=ISO] [GO:0000983 "RNA polymerase
II core promoter sequence-specific DNA binding transcription factor
activity" evidence=ISO] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
RGD:1559787 GO:GO:0005783 GO:GO:0005634 GO:GO:0021766 GO:GO:0001764
GO:GO:0008285 GO:GO:0030168 GO:GO:0030155 GO:GO:0071333
GO:GO:0043565 GO:GO:0034097 GO:GO:0045597 GO:GO:0007616
GO:GO:0003705 GO:GO:0001077 GO:GO:0030336 GO:GO:0060292
GO:GO:0035855 GO:GO:0000790 GO:GO:0060218 GO:GO:0008306
GO:GO:0046716 GO:GO:0045987 GO:GO:0009725 GO:GO:0055003
GO:GO:0045214 GO:GO:0001707 GO:GO:0001569 GO:GO:0007160
GO:GO:0001829 GO:GO:0048589 SUPFAM:SSF55455 GO:GO:0051491
GO:GO:0001947 GO:GO:0031175 GO:GO:0048821 GO:GO:0061029
GO:GO:0000983 GO:GO:0070830 GO:GO:0031490
GeneTree:ENSGT00400000022158 GO:GO:0043149 GO:GO:0001076
GO:GO:0060347 GO:GO:0090398 GO:GO:0090009 GO:GO:0033561
GO:GO:0090136 GO:GO:0045059 GO:GO:0043589 GO:GO:0010669
GO:GO:0002011 GO:GO:0035912 GO:GO:0002042 GO:GO:0030220
GO:GO:0060947 GO:GO:0060261 GO:GO:0022028 GO:GO:0030038
GO:GO:0010736 GO:GO:0010735 OrthoDB:EOG48KRCZ OMA:MITSDTG
IPI:IPI00565301 PhosphoSite:D3ZHH8 Ensembl:ENSRNOT00000061430
UCSC:RGD:1559787 GO:GO:0046016 Uniprot:D3ZHH8
Length = 504
Score = 98 (39.6 bits), Expect = 0.00034, P = 0.00034
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIE 56
M+ I+N+ R TFSKR +GI +K EL TLT + + LV S++G ++F ++
Sbjct: 144 MEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ 199
>UNIPROTKB|F1PH12 [details] [associations]
symbol:SRF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 SUPFAM:SSF55455 GeneTree:ENSGT00400000022158 CTD:6722
KO:K04378 OMA:MITSDTG EMBL:AAEX03008333 RefSeq:XP_852302.1
Ensembl:ENSCAFT00000002887 GeneID:612861 KEGG:cfa:612861
Uniprot:F1PH12
Length = 508
Score = 98 (39.6 bits), Expect = 0.00034, P = 0.00034
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIE 56
M+ I+N+ R TFSKR +GI +K EL TLT + + LV S++G ++F ++
Sbjct: 148 MEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ 203
>UNIPROTKB|P11831 [details] [associations]
symbol:SRF "Serum response factor" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0001076
"RNA polymerase II transcription factor binding transcription
factor activity" evidence=IEA] [GO:0001569 "patterning of blood
vessels" evidence=IEA] [GO:0001707 "mesoderm formation"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IEA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0010669 "epithelial
structure maintenance" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0022028 "tangential migration from
the subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0030038 "contractile actin filament bundle assembly"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030168 "platelet activation" evidence=IEA]
[GO:0030220 "platelet formation" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0033561 "regulation of water loss via
skin" evidence=IEA] [GO:0035855 "megakaryocyte development"
evidence=IEA] [GO:0035912 "dorsal aorta morphogenesis"
evidence=IEA] [GO:0043149 "stress fiber assembly" evidence=IEA]
[GO:0043589 "skin morphogenesis" evidence=IEA] [GO:0045059
"positive thymic T cell selection" evidence=IEA] [GO:0045214
"sarcomere organization" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0048821 "erythrocyte development"
evidence=IEA] [GO:0051491 "positive regulation of filopodium
assembly" evidence=IEA] [GO:0055003 "cardiac myofibril assembly"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IEA] [GO:0060292 "long term synaptic depression"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0060947 "cardiac vascular smooth muscle cell differentiation"
evidence=IEA] [GO:0061029 "eyelid development in camera-type eye"
evidence=IEA] [GO:0070830 "tight junction assembly" evidence=IEA]
[GO:0090009 "primitive streak formation" evidence=IEA] [GO:0090136
"epithelial cell-cell adhesion" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0000983 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0001829 "trophectodermal cell differentiation"
evidence=IDA] [GO:0045597 "positive regulation of cell
differentiation" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0010735 "positive regulation of transcription via serum
response element binding" evidence=IDA] [GO:0060261 "positive
regulation of transcription initiation from RNA polymerase II
promoter" evidence=IDA] [GO:0009636 "response to toxic substance"
evidence=TAS] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0034097 "response to cytokine stimulus" evidence=NAS;IMP]
[GO:0060055 "angiogenesis involved in wound healing" evidence=TAS]
[GO:0090398 "cellular senescence" evidence=IMP] [GO:0048666 "neuron
development" evidence=TAS] [GO:0045987 "positive regulation of
smooth muscle contraction" evidence=IDA] [GO:0051150 "regulation of
smooth muscle cell differentiation" evidence=TAS] [GO:0001947
"heart looping" evidence=ISS] [GO:0007507 "heart development"
evidence=ISS] [GO:0046716 "muscle cell homeostasis" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0010736 "serum response element binding"
evidence=IDA] [GO:0009725 "response to hormone stimulus"
evidence=IDA] [GO:0003257 "positive regulation of transcription
from RNA polymerase II promoter involved in myocardial precursor
cell differentiation" evidence=IGI] [GO:0042789 "mRNA transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=ISS] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=ISS] [GO:1900222 "negative regulation of beta-amyloid
clearance" evidence=IMP] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001666 "response to hypoxia" evidence=IEP]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:p38_mk2pathway
Pathway_Interaction_DB:hdac_classii_pathway GO:GO:0021766
GO:GO:0001764 GO:GO:0008285 GO:GO:0030168 GO:GO:0051091
EMBL:CH471081 GO:GO:0030155 GO:GO:0009636 GO:GO:0034097
GO:GO:0001666 GO:GO:0045597 GO:GO:0007616 GO:GO:0003705
GO:GO:0000978 GO:GO:0001077 GO:GO:0030336 GO:GO:0060292
GO:GO:0035855 GO:GO:0000790 GO:GO:0048666 GO:GO:0060218
GO:GO:0008306 GO:GO:0046716 GO:GO:0045987 GO:GO:0009725
GO:GO:0055003 GO:GO:0045214 GO:GO:0001707 GO:GO:0001569
GO:GO:0007160 GO:GO:0001829 GO:GO:0048589 eggNOG:COG5068
SUPFAM:SSF55455 GO:GO:0051491 GO:GO:0001947
Pathway_Interaction_DB:ar_pathway GO:GO:0031175 GO:GO:1900222
GO:GO:0048821 GO:GO:0061029 GO:GO:0070830 GO:GO:0031490
GO:GO:0042789 GO:GO:0043149 GO:GO:0001076 GO:GO:0060347
GO:GO:0090398 GO:GO:0060055 GO:GO:0051150 GO:GO:0003257
GO:GO:0090009 Pathway_Interaction_DB:mapktrkpathway GO:GO:0033561
GO:GO:0090136 Pathway_Interaction_DB:pdgfrapathway GO:GO:0045059
GO:GO:0043589 EMBL:AL355385 EMBL:AL133375 GO:GO:0010669
GO:GO:0002011 GO:GO:0035912 GO:GO:0002042 PDB:1HBX PDB:1K6O
PDBsum:1HBX PDBsum:1K6O GO:GO:0030220 GO:GO:0060947 GO:GO:0060261
GO:GO:0022028 GO:GO:0030038 GO:GO:0010736 GO:GO:0010735
HOGENOM:HOG000012380 HOVERGEN:HBG014968 OrthoDB:EOG48KRCZ
EMBL:J03161 EMBL:BC048211 EMBL:BC052572 IPI:IPI00007879 PIR:A31637
RefSeq:NP_003122.1 UniGene:Hs.520140 PDB:1SRS PDBsum:1SRS
ProteinModelPortal:P11831 SMR:P11831 DIP:DIP-49N IntAct:P11831
STRING:P11831 GlycoSuiteDB:P11831 PhosphoSite:P11831 DMDM:134876
PRIDE:P11831 Ensembl:ENST00000265354 GeneID:6722 KEGG:hsa:6722
UCSC:uc003oui.3 CTD:6722 GeneCards:GC06P043138 HGNC:HGNC:11291
HPA:CAB005416 HPA:HPA001819 MIM:600589 neXtProt:NX_P11831
PharmGKB:PA36116 InParanoid:P11831 KO:K04378 OMA:MITSDTG
PhylomeDB:P11831 EvolutionaryTrace:P11831 GenomeRNAi:6722
NextBio:26222 PMAP-CutDB:P11831 ArrayExpress:P11831 Bgee:P11831
CleanEx:HS_SRF Genevestigator:P11831 GermOnline:ENSG00000112658
Uniprot:P11831
Length = 508
Score = 98 (39.6 bits), Expect = 0.00034, P = 0.00034
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIE 56
M+ I+N+ R TFSKR +GI +K EL TLT + + LV S++G ++F ++
Sbjct: 148 MEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ 203
>UNIPROTKB|E1BJP4 [details] [associations]
symbol:SRF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:1900222 "negative regulation of beta-amyloid clearance"
evidence=IEA] [GO:0090398 "cellular senescence" evidence=IEA]
[GO:0090136 "epithelial cell-cell adhesion" evidence=IEA]
[GO:0090009 "primitive streak formation" evidence=IEA] [GO:0070830
"tight junction assembly" evidence=IEA] [GO:0061029 "eyelid
development in camera-type eye" evidence=IEA] [GO:0060947 "cardiac
vascular smooth muscle cell differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060292
"long term synaptic depression" evidence=IEA] [GO:0060261 "positive
regulation of transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA] [GO:0055003 "cardiac myofibril
assembly" evidence=IEA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048821 "erythrocyte development" evidence=IEA]
[GO:0048589 "developmental growth" evidence=IEA] [GO:0046716
"muscle cell homeostasis" evidence=IEA] [GO:0045987 "positive
regulation of smooth muscle contraction" evidence=IEA] [GO:0045597
"positive regulation of cell differentiation" evidence=IEA]
[GO:0045214 "sarcomere organization" evidence=IEA] [GO:0045059
"positive thymic T cell selection" evidence=IEA] [GO:0043589 "skin
morphogenesis" evidence=IEA] [GO:0043149 "stress fiber assembly"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042789 "mRNA transcription from RNA polymerase
II promoter" evidence=IEA] [GO:0035912 "dorsal aorta morphogenesis"
evidence=IEA] [GO:0035855 "megakaryocyte development" evidence=IEA]
[GO:0034097 "response to cytokine stimulus" evidence=IEA]
[GO:0033561 "regulation of water loss via skin" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030220 "platelet
formation" evidence=IEA] [GO:0030168 "platelet activation"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030038 "contractile actin filament bundle
assembly" evidence=IEA] [GO:0022028 "tangential migration from the
subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0010736
"serum response element binding" evidence=IEA] [GO:0010735
"positive regulation of transcription via serum response element
binding" evidence=IEA] [GO:0010669 "epithelial structure
maintenance" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0008306 "associative learning"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003257 "positive regulation of
transcription from RNA polymerase II promoter involved in
myocardial precursor cell differentiation" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0001829
"trophectodermal cell differentiation" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001707 "mesoderm formation"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001569 "patterning of blood vessels" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001076 "RNA
polymerase II transcription factor binding transcription factor
activity" evidence=IEA] [GO:0000983 "RNA polymerase II core
promoter sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005783 GO:GO:0021766
GO:GO:0001764 GO:GO:0030168 GO:GO:0030155 GO:GO:0034097
GO:GO:0045597 GO:GO:0003705 GO:GO:0001077 GO:GO:0060292
GO:GO:0035855 GO:GO:0000790 GO:GO:0060218 GO:GO:0008306
GO:GO:0046716 GO:GO:0045987 GO:GO:0009725 GO:GO:0055003
GO:GO:0045214 GO:GO:0001707 GO:GO:0001569 GO:GO:0007160
GO:GO:0001829 GO:GO:0048589 SUPFAM:SSF55455 GO:GO:0051491
GO:GO:0001947 GO:GO:0031175 GO:GO:0048821 GO:GO:0061029
GO:GO:0000983 GO:GO:0070830 GO:GO:0031490
GeneTree:ENSGT00400000022158 GO:GO:0043149 GO:GO:0001076
GO:GO:0060347 GO:GO:0090398 GO:GO:0090009 GO:GO:0033561
GO:GO:0090136 GO:GO:0045059 GO:GO:0043589 GO:GO:0010669
GO:GO:0002011 GO:GO:0035912 GO:GO:0002042 GO:GO:0030220
GO:GO:0060947 GO:GO:0060261 GO:GO:0022028 GO:GO:0030038
GO:GO:0010736 GO:GO:0010735 CTD:6722 KO:K04378 OMA:MITSDTG
EMBL:DAAA02055086 IPI:IPI00700101 RefSeq:NP_001192945.1
UniGene:Bt.51656 Ensembl:ENSBTAT00000016981 GeneID:533039
KEGG:bta:533039 NextBio:20875885 Uniprot:E1BJP4
Length = 509
Score = 98 (39.6 bits), Expect = 0.00034, P = 0.00034
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIE 56
M+ I+N+ R TFSKR +GI +K EL TLT + + LV S++G ++F ++
Sbjct: 149 MEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ 204
>UNIPROTKB|F1RRM9 [details] [associations]
symbol:SRF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:1900222 "negative regulation of beta-amyloid clearance"
evidence=IEA] [GO:0090398 "cellular senescence" evidence=IEA]
[GO:0090136 "epithelial cell-cell adhesion" evidence=IEA]
[GO:0090009 "primitive streak formation" evidence=IEA] [GO:0070830
"tight junction assembly" evidence=IEA] [GO:0061029 "eyelid
development in camera-type eye" evidence=IEA] [GO:0060947 "cardiac
vascular smooth muscle cell differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060292
"long term synaptic depression" evidence=IEA] [GO:0060261 "positive
regulation of transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA] [GO:0055003 "cardiac myofibril
assembly" evidence=IEA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048821 "erythrocyte development" evidence=IEA]
[GO:0048589 "developmental growth" evidence=IEA] [GO:0046716
"muscle cell homeostasis" evidence=IEA] [GO:0045987 "positive
regulation of smooth muscle contraction" evidence=IEA] [GO:0045597
"positive regulation of cell differentiation" evidence=IEA]
[GO:0045214 "sarcomere organization" evidence=IEA] [GO:0045059
"positive thymic T cell selection" evidence=IEA] [GO:0043589 "skin
morphogenesis" evidence=IEA] [GO:0043149 "stress fiber assembly"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042789 "mRNA transcription from RNA polymerase
II promoter" evidence=IEA] [GO:0035912 "dorsal aorta morphogenesis"
evidence=IEA] [GO:0035855 "megakaryocyte development" evidence=IEA]
[GO:0034097 "response to cytokine stimulus" evidence=IEA]
[GO:0033561 "regulation of water loss via skin" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030220 "platelet
formation" evidence=IEA] [GO:0030168 "platelet activation"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030038 "contractile actin filament bundle
assembly" evidence=IEA] [GO:0022028 "tangential migration from the
subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0010736
"serum response element binding" evidence=IEA] [GO:0010735
"positive regulation of transcription via serum response element
binding" evidence=IEA] [GO:0010669 "epithelial structure
maintenance" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0008306 "associative learning"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003257 "positive regulation of
transcription from RNA polymerase II promoter involved in
myocardial precursor cell differentiation" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0001829
"trophectodermal cell differentiation" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001707 "mesoderm formation"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001569 "patterning of blood vessels" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001076 "RNA
polymerase II transcription factor binding transcription factor
activity" evidence=IEA] [GO:0000983 "RNA polymerase II core
promoter sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005783 GO:GO:0021766
GO:GO:0001764 GO:GO:0030168 GO:GO:0030155 GO:GO:0034097
GO:GO:0045597 GO:GO:0003705 GO:GO:0001077 GO:GO:0060292
GO:GO:0035855 GO:GO:0000790 GO:GO:0060218 GO:GO:0008306
GO:GO:0046716 GO:GO:0045987 GO:GO:0009725 GO:GO:0055003
GO:GO:0045214 GO:GO:0001707 GO:GO:0001569 GO:GO:0007160
GO:GO:0001829 GO:GO:0048589 SUPFAM:SSF55455 GO:GO:0051491
GO:GO:0001947 GO:GO:0031175 GO:GO:0048821 GO:GO:0061029
GO:GO:0000983 GO:GO:0070830 GO:GO:0031490
GeneTree:ENSGT00400000022158 GO:GO:0043149 GO:GO:0001076
GO:GO:0060347 GO:GO:0090398 GO:GO:0090009 GO:GO:0033561
GO:GO:0090136 GO:GO:0045059 GO:GO:0043589 GO:GO:0010669
GO:GO:0002011 GO:GO:0035912 GO:GO:0002042 GO:GO:0030220
GO:GO:0060947 GO:GO:0060261 GO:GO:0022028 GO:GO:0030038
GO:GO:0010736 GO:GO:0010735 CTD:6722 KO:K04378 OMA:MITSDTG
EMBL:CR974479 RefSeq:XP_001929300.1 Ensembl:ENSSSCT00000001852
GeneID:100155958 KEGG:ssc:100155958 Uniprot:F1RRM9
Length = 512
Score = 98 (39.6 bits), Expect = 0.00035, P = 0.00035
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIE 56
M+ I+N+ R TFSKR +GI +K EL TLT + + LV S++G ++F ++
Sbjct: 152 MEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ 207
>ZFIN|ZDB-GENE-990714-29 [details] [associations]
symbol:srf "serum response factor" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
ZFIN:ZDB-GENE-990714-29 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455
GeneTree:ENSGT00400000022158 HOGENOM:HOG000012380
HOVERGEN:HBG014968 OrthoDB:EOG48KRCZ CTD:6722 KO:K04378
EMBL:CR925810 IPI:IPI00833860 RefSeq:NP_001103996.1 UniGene:Dr.8167
SMR:A8HAM3 Ensembl:ENSDART00000076040 GeneID:30431 KEGG:dre:30431
OMA:CLTHERE NextBio:20806833 Uniprot:A8HAM3
Length = 539
Score = 98 (39.6 bits), Expect = 0.00037, P = 0.00037
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIE 56
M+ I+N+ R TFSKR +GI +K EL TLT + + LV S++G ++F ++
Sbjct: 127 MEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ 182
>UNIPROTKB|D6RG21 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455 EMBL:AC008525
EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C IPI:IPI00968000
ProteinModelPortal:D6RG21 SMR:D6RG21 Ensembl:ENST00000508610
HOGENOM:HOG000213989 ArrayExpress:D6RG21 Bgee:D6RG21 Uniprot:D6RG21
Length = 126
Score = 89 (36.4 bits), Expect = 0.00045, P = 0.00045
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 3 KIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVANRF 62
+I +E R +TF+KR G+ +K EL L IA ++F+ + K F + + ++ V ++
Sbjct: 10 RIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKY 69
Query: 63 LGLN 66
N
Sbjct: 70 TEYN 73
>UNIPROTKB|D6RCM6 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455 HOGENOM:HOG000230620
EMBL:AC008525 EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C
IPI:IPI00964067 ProteinModelPortal:D6RCM6 SMR:D6RCM6
Ensembl:ENST00000502983 ArrayExpress:D6RCM6 Bgee:D6RCM6
Uniprot:D6RCM6
Length = 129
Score = 89 (36.4 bits), Expect = 0.00072, P = 0.00072
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 3 KIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVANRF 62
+I +E R +TF+KR G+ +K EL L IA ++F+ + K F + + ++ V ++
Sbjct: 10 RIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKY 69
Query: 63 LGLN 66
N
Sbjct: 70 TEYN 73
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 140 132 0.00091 102 3 11 22 0.38 31
30 0.43 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 121
No. of states in DFA: 562 (60 KB)
Total size of DFA: 131 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.74u 0.19s 11.93t Elapsed: 00:00:00
Total cpu time: 11.74u 0.19s 11.93t Elapsed: 00:00:00
Start: Sat May 11 03:49:46 2013 End: Sat May 11 03:49:46 2013
WARNINGS ISSUED: 1