BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039494
(140 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4PSU4|AGL61_ARATH Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana
GN=AGL61 PE=1 SV=1
Length = 264
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 43/153 (28%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
M KI+ E R +TFSKR +G+++K SEL TL + I +VFS + KPFSFG+PS+E+V +
Sbjct: 69 MVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLD 128
Query: 61 RFLGLN-----------------CQM----------------------RKRKETQPR--- 78
R++ N C++ RKE+ R
Sbjct: 129 RYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEMRKESVRRSMI 188
Query: 79 -WWETPVYEFNHQELLQMDATIDNLSRTFIAKL 110
WWE PV E N +L +M ++ L +T + +
Sbjct: 189 NWWEKPVEEMNMVQLQEMKYALEELRKTVVTNM 221
>sp|Q9FKK2|AGL62_ARATH Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana
GN=AGL62 PE=1 SV=1
Length = 299
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
M K++NE +TFSKR SG+++K SEL TL + +A +VFS K FSFG+P++++V +
Sbjct: 13 MVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVID 72
Query: 61 RFLGLN 66
RF+ N
Sbjct: 73 RFINNN 78
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6
PE=1 SV=2
Length = 252
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
MK+IEN+ R +TFSKR +G+ +K EL L + +A ++FS GK + FG+ IE+
Sbjct: 8 MKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGIESTIE 67
Query: 61 RF-LGLNCQMRKRK--ETQPRWWETPVYEFNHQELLQMDATIDNLSRT 105
R+ NC + K ET W QE+ ++ + ++L RT
Sbjct: 68 RYNRCYNCSLSNNKPEETTQSWC---------QEVTKLKSKYESLVRT 106
>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15
PE=3 SV=1
Length = 264
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN + R +TFSKR +G+ +K EL L + +A +VFS+SGK F F + S++
Sbjct: 8 IKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTSMKKTLL 67
Query: 61 RFL---------GLNCQMRKRKET 75
R+ G+NC+ ++E
Sbjct: 68 RYGNYQISSDVPGINCKTENQEEC 91
>sp|Q39685|CMB1_DIACA MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1
Length = 233
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TF+KR +G+ +K EL L + +A +VFS GK + F + S +
Sbjct: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNKTL 67
Query: 60 NRFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDATIDNLSRTFIAKLNEKTAAASS 119
R+ C + +QP + E ++QE L++ A +D L R+ L E S+
Sbjct: 68 ERY--QRCSYGSLETSQP----SKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELST 121
Query: 120 SAAPPMYFHHGLGSFPMQFRS 140
+ H L Q RS
Sbjct: 122 KELEQL--EHQLDKSLRQIRS 140
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
MK+IEN R +TFSKR +G+ +K EL L + ++ ++FS GK + F + +++ +
Sbjct: 8 MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTID 67
Query: 61 RFLGLNCQMRKRKETQPRWWETPVYEFNHQEL 92
R+L + T+ R PV E N Q L
Sbjct: 68 RYL---------RHTKDRVSTKPVSEENMQHL 90
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1
PE=2 SV=1
Length = 256
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFG-NPSIEAVA 59
+K+IEN+ R +TFSKR +G+++K E+ L + +A +VFS GK F + +P +E +
Sbjct: 8 LKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDPCMEKIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN + R +TFSKR SG+ +K EL L + +A +VFS+SGK F + + ++ +
Sbjct: 8 IKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTGMKQTLS 67
Query: 61 RF 62
R+
Sbjct: 68 RY 69
>sp|Q9M2K8|AGL18_ARATH Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana
GN=AGL18 PE=2 SV=1
Length = 256
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+KKIEN + R +TFSKR +G+ +K EL L + +A ++FS +GK + F + +E + +
Sbjct: 8 IKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSVCMEQILS 67
Query: 61 RF 62
R+
Sbjct: 68 RY 69
>sp|Q6H711|MAD29_ORYSJ MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica
GN=MADS29 PE=2 SV=1
Length = 260
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 29/129 (22%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN R +TFSKR G+ +K +EL L + + ++FS +GK F + +P+
Sbjct: 8 IKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPT------ 61
Query: 61 RFLGLNCQMRKRKETQPRWWETPVYEFNHQ------------ELLQMDATI-----DNLS 103
C +R+ E T E NH E+ ++D I D+LS
Sbjct: 62 ------CSLRELIEHYQTVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLS 115
Query: 104 RTFIAKLNE 112
+A +N+
Sbjct: 116 NLTLADIND 124
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN+ R +TFSKR +G+ +K EL L + +A ++FS GK + FG+ I
Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLE 67
Query: 61 RF 62
R+
Sbjct: 68 RY 69
>sp|Q5K4R0|MAD47_ORYSJ MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica
GN=MADS47 PE=1 SV=2
Length = 246
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+++I+N R +TFSKR G+++K EL L + + +VFS +GK F F + S+E + +
Sbjct: 27 IRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIID 86
Query: 61 RF 62
R+
Sbjct: 87 RY 88
>sp|Q8VWM8|M17_MAIZE MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1
Length = 259
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN R +TFSKR G+ +K +EL L + + ++FS +GK F + +P+
Sbjct: 8 IKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPA------ 61
Query: 61 RFLGLNCQMRKRKETQPRWWETPVYEFNHQELLQMDAT 98
C +R+ E + E NH + + ++ T
Sbjct: 62 ------CSLRELIEQYQHATNSHFEEINHDQQILLEMT 93
>sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1
PE=2 SV=1
Length = 248
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN R +TF KR +G+ +K EL L + +A +VFS G+ + + N S++A
Sbjct: 24 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNSVKATIE 83
Query: 61 RF 62
R+
Sbjct: 84 RY 85
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+KKI+N R +TFSKR G+++K EL L + +A ++FS +GK F + + S++ +
Sbjct: 8 IKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMKQILE 67
Query: 61 R 61
R
Sbjct: 68 R 68
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1
SV=1
Length = 242
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN R +TF KR +G+ +K EL L + +A +VFS G+ + + N S++A
Sbjct: 24 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIE 83
Query: 61 RF 62
R+
Sbjct: 84 RY 85
>sp|P0DI14|AP1_BRARP Floral homeotic protein APETALA 1 OS=Brassica rapa subsp.
pekinensis GN=AP1 PE=3 SV=1
Length = 256
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR +G+++K E+ L + +A +VFS GK F + S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN R +TF KR +G+ +K EL L + +A +VFS G+ + + N S++A
Sbjct: 24 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIE 83
Query: 61 RF 62
R+
Sbjct: 84 RY 85
>sp|Q8GTF4|AP1C_BRAOB Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
botrytis GN=AP1C PE=2 SV=1
Length = 256
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR +G+++K E+ L + +A +VFS GK F + S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|B4YPV4|AP1C_BRAOA Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
alboglabra GN=AP1C PE=3 SV=1
Length = 256
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR +G+++K E+ L + +A +VFS GK F + S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q96355|1AP1_BRAOT Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var.
italica GN=1AP1 PE=2 SV=1
Length = 256
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR +G+++K E+ L + +A +VFS GK F + S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8
PE=1 SV=1
Length = 242
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR SG+ +K E+ L + +A +VFS GK F + S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERIL 67
Query: 60 ---NRFLGLNCQMRKRKETQPRWW---------ETPVYEFNHQELLQMDATIDNLSRTFI 107
+R+L + Q+ R +Q W V E N + + D +D+LS +
Sbjct: 68 ERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGED--LDSLSLKEL 125
Query: 108 AKLNEKTAAASSS 120
L + AA S
Sbjct: 126 QSLEHQLDAAIKS 138
>sp|O82794|AGL24_ARATH MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1
Length = 220
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+KKI+N R +TFSKR GI++K EL L + +A ++FS +GK F F + + +
Sbjct: 8 IKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSSRMRDILG 67
Query: 61 RF 62
R+
Sbjct: 68 RY 69
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
++KI+N R +TFSKR G+++K EL L + +A ++FS +GK F F + S++ V
Sbjct: 8 IRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLE 67
Query: 61 R 61
R
Sbjct: 68 R 68
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 42/62 (67%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+++I+N R +TFSKR +GI++K EL L + + ++FS +G+ + + + S+++V +
Sbjct: 8 IRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTSMKSVID 67
Query: 61 RF 62
R+
Sbjct: 68 RY 69
>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum
lycopersicum GN=TDR4 PE=2 SV=1
Length = 227
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR SG+ +K E+ L + + +VFS GK F + N S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+I+N R +TFSKR SG+++K EL L + + LVFS + + + F + S++++
Sbjct: 8 IKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIE 67
Query: 61 RF 62
R+
Sbjct: 68 RY 69
>sp|Q6R4R9|CALA_BRAOB Truncated transcription factor CAULIFLOWER A OS=Brassica oleracea
var. botrytis GN=CAL-A PE=2 SV=2
Length = 150
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
MK+IEN+ R +TFSKR +G+ +K E+ L + ++ +VFS GK F + + S +E V
Sbjct: 8 MKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSESCMEKVL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN+ R +TFSKR +G+ +K EL L + +A ++FS GK + FG+ I
Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLE 67
Query: 61 RF 62
++
Sbjct: 68 KY 69
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp.
pekinensis GN=CAL PE=2 SV=1
Length = 254
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
MK+IEN+ R +TFSKR +G+ +K E+ L + ++ +VFS GK F + + S +E V
Sbjct: 8 MKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSESCMEKVL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN R +TF KR +G+ +K EL L + +A +VFS G+ + + N S+++
Sbjct: 8 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKSTVE 67
Query: 61 RFLGLN 66
R+ N
Sbjct: 68 RYKKAN 73
>sp|Q6R4R6|CALD_BRAOB Truncated transcription factor CAULIFLOWER D OS=Brassica oleracea
var. botrytis GN=CAL-D PE=2 SV=1
Length = 148
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
MK+IEN+ R +TFSKR +G+ +K E+ L + ++ +VFS GK F + + S +E V
Sbjct: 8 MKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSESCMEKVL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp.
chinensis GN=CAL PE=2 SV=1
Length = 254
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
MK+IEN+ R +TFSKR +G+ +K E+ L + ++ +VFS GK F + + S +E V
Sbjct: 8 MKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSESCMEKVL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2
SV=1
Length = 254
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
MK+IEN+ R +TFSKR +G+ +K E+ L + ++ +VFS GK F + + S +E V
Sbjct: 8 MKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSESCMEKVL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|P48007|PIST_ARATH Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI
PE=1 SV=1
Length = 208
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 38/56 (67%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIE 56
+K+IEN + R++TFSKR +G+ +K E+ L + +A ++F+ +GK + PS++
Sbjct: 8 IKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMD 63
>sp|Q6R4R7|CALC_BRAOB Truncated transcription factor CAULIFLOWER C OS=Brassica oleracea
var. botrytis GN=CAL-C PE=2 SV=1
Length = 148
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
MK+IEN+ R +TFSKR +G+ +K E+ L + ++ +VFS GK F + + S +E V
Sbjct: 8 MKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSESCMEKVL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q6R4R8|CALB_BRAOB Truncated transcription factor CAULIFLOWER B OS=Brassica oleracea
var. botrytis GN=CAL-B PE=2 SV=1
Length = 150
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
MK+IEN+ R +TFSKR +G+ +K E+ L + ++ +VFS GK F + + S +E V
Sbjct: 8 MKRIENKINRQVTFSKRRAGLLKKAHEVSILCDAEVSLIVFSHKGKLFEYSSESCMEKVL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q07472|MADS1_PETHY Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2
SV=1
Length = 231
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 67/124 (54%), Gaps = 24/124 (19%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEA--- 57
+K+IEN+ R +T+SKR +G+++K +EL L + ++ ++ S +GK F +PSI
Sbjct: 8 IKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQL 67
Query: 58 --VANRFLGLNC----------QMRK--------RKETQPRWWETPVYEFNHQELLQMDA 97
+ + +G++ Q+RK RKE + R E+ + + N+++L ++
Sbjct: 68 FDLYQKTVGVDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGES-LNDLNYEQLEELME 126
Query: 98 TIDN 101
+DN
Sbjct: 127 NVDN 130
>sp|Q42429|AGL8_SOLTU Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 250
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR SG+ +K E+ L + + +VFS GK F + N S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica
GN=MADS58 PE=2 SV=1
Length = 272
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPSIEAVAN 60
+K+IEN R +TF KR SG+ +K EL L + +A +VFS G+ + + N S++
Sbjct: 50 IKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKETIE 109
Query: 61 RFLGLN 66
R+ N
Sbjct: 110 RYKKAN 115
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8
PE=2 SV=1
Length = 241
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR SG+ +K E+ L + +A ++FS GK F + S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKIL 67
Query: 60 ---NRFLGLNCQMRKRKETQPRWW---------ETPVYEFNHQELLQMDATIDNLSRTFI 107
+R+L + Q+ R +Q W V E N + + D +D+LS +
Sbjct: 68 ERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGED--LDSLSLKEL 125
Query: 108 AKLNEKTAAASSS 120
L + AA S
Sbjct: 126 QSLEHQLHAAIKS 138
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2
SV=1
Length = 254
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR +G+ +K E+ L + +A +VFS GK F + S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
botrytis GN=AP1A PE=2 SV=1
Length = 256
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR +G+ +K E+ L + +A +VFS GK F + S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|B4YPW6|AP1A_BRAOA Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
alboglabra GN=AP1A PE=3 SV=1
Length = 256
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR +G+ +K E+ L + +A +VFS GK F + S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q96356|2AP1_BRAOT Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var.
italica GN=2AP1 PE=2 SV=1
Length = 256
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR +G+ +K E+ L + +A +VFS GK F + S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL
PE=1 SV=3
Length = 255
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR +G+ +K E+ L + ++ +VFS GK F + + S +E V
Sbjct: 8 LKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q9C633|AGL97_ARATH Agamous-like MADS-box protein AGL97 OS=Arabidopsis thaliana
GN=AGL97 PE=1 SV=1
Length = 266
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLT---VSAIARLVFSQSGKPF-SFGNPSIE 56
++KI+N++ R ++FSKR G+Y K SEL L+ ++ IA V S S F SFG+ S++
Sbjct: 10 IEKIQNKNPRAVSFSKRRKGLYSKASELCLLSDAEIAIIATPVSSNSNAAFYSFGHSSVD 69
Query: 57 AVANRFLGLNCQMRKRKETQPRWWE 81
V FL +R + WWE
Sbjct: 70 NVVAAFLA-----NQRPCDERFWWE 89
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR +G+ +K E+ L + +A +VFS GK F + S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|P35631|AP1_ARATH Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1
PE=1 SV=2
Length = 256
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS-IEAVA 59
+K+IEN+ R +TFSKR +G+ +K E+ L + +A +VFS GK F + S +E +
Sbjct: 8 LKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKIL 67
Query: 60 NRF 62
R+
Sbjct: 68 ERY 70
>sp|Q944S9|MAD16_ORYSJ MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica
GN=MADS16 PE=1 SV=2
Length = 224
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 1 MKKIENEDGRLITFSKRTSGIYRKVSELVTLTVSAIARLVFSQSGKPFSFGNPS--IEAV 58
+K+IEN R +T+SKR +GI +K EL L + +A ++FS +GK F +PS I+ +
Sbjct: 8 IKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGI 67
Query: 59 ANRF 62
+R+
Sbjct: 68 FDRY 71
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,573,540
Number of Sequences: 539616
Number of extensions: 1612541
Number of successful extensions: 4425
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 4247
Number of HSP's gapped (non-prelim): 191
length of query: 140
length of database: 191,569,459
effective HSP length: 105
effective length of query: 35
effective length of database: 134,909,779
effective search space: 4721842265
effective search space used: 4721842265
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)