BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039495
(327 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297797059|ref|XP_002866414.1| hypothetical protein ARALYDRAFT_496261 [Arabidopsis lyrata subsp.
lyrata]
gi|297312249|gb|EFH42673.1| hypothetical protein ARALYDRAFT_496261 [Arabidopsis lyrata subsp.
lyrata]
Length = 352
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 103/182 (56%), Gaps = 12/182 (6%)
Query: 141 DADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGY 200
+ PPGFEKI W PP +VKLNI+G+S+ +G+ GIVRD+SGKW+ GY
Sbjct: 183 ETSLPPGFEKI--------WTPP---FVKLNIQGTSNPLSDLSGSAGIVRDQSGKWVFGY 231
Query: 201 SKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALIL 260
+ + +A+ L A+YHGL +W+ GFR++ +E S E + L +S + L+
Sbjct: 232 IRCHRSIPEVAAGLLAIYHGLKFLWDSGFRRIHLETTSFEIINALTTRSSLFCKRKTLLG 291
Query: 261 SCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTG 320
SC++ + + W+C + I +E NSCA WLA E QP L F+ PP L + +KD
Sbjct: 292 SCKDMILKEWECDIYHISKEQNSCAEWLAKRSEEQP-QELVFFEYPPRGLVDLLEKDRLA 350
Query: 321 IV 322
+
Sbjct: 351 AI 352
>gi|297789220|ref|XP_002862599.1| hypothetical protein ARALYDRAFT_359504 [Arabidopsis lyrata subsp.
lyrata]
gi|297308223|gb|EFH38857.1| hypothetical protein ARALYDRAFT_359504 [Arabidopsis lyrata subsp.
lyrata]
Length = 203
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 102/182 (56%), Gaps = 12/182 (6%)
Query: 141 DADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGY 200
+ PPGFEKI W PP VKLNI+G+S+ +G+ GIVRD+SGKW+ GY
Sbjct: 34 ETSLPPGFEKI--------WTPP---LVKLNIQGTSNPLSDLSGSAGIVRDQSGKWVFGY 82
Query: 201 SKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALIL 260
+ + +A+ L A+YHGL +W+ GFR++ +E S E + L +S + L+
Sbjct: 83 IRCHRSIPEVAAGLLAIYHGLKFLWDSGFRRIHLETTSFEIINALTTRSSLFCKRKTLLG 142
Query: 261 SCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTG 320
SC++ + + W+C + I +E NSCA WLA E QP L F+ PP L + +KD
Sbjct: 143 SCKDMILKEWECDIYHISKEQNSCAEWLAKRSEEQP-QELVFFEYPPRGLVDLLEKDRLA 201
Query: 321 IV 322
+
Sbjct: 202 AI 203
>gi|240256469|ref|NP_200917.4| nucleic acid binding protein [Arabidopsis thaliana]
gi|9759455|dbj|BAB10371.1| unnamed protein product [Arabidopsis thaliana]
gi|332010037|gb|AED97420.1| nucleic acid binding protein [Arabidopsis thaliana]
Length = 657
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 98/177 (55%), Gaps = 12/177 (6%)
Query: 141 DADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGY 200
+A PPGFEKI W PP VKLNI+G+S+ + GIVRD+SGKW+ GY
Sbjct: 488 EASVPPGFEKI--------WTPP---LVKLNIQGTSNPLSDLTRSAGIVRDQSGKWVFGY 536
Query: 201 SKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALIL 260
+ + + + L A+Y GL +W+ GFR++ +E S E + L +S ++ L+
Sbjct: 537 IRCHKSIPEVVAGLLAIYQGLKYLWDSGFRRIHLETTSFEIINALTTKSSLFCKSKTLLG 596
Query: 261 SCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKD 317
+C++ + + W+C + I +E NSCA WLA E QP L F+ PP L +KD
Sbjct: 597 ACKDMILKEWECDIYHISKEQNSCAEWLAKRSEEQP-QELVFFEYPPRGLMDFLEKD 652
>gi|224093782|ref|XP_002309989.1| predicted protein [Populus trichocarpa]
gi|222852892|gb|EEE90439.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 102/177 (57%), Gaps = 4/177 (2%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS 212
+ ++++ W P +KLN++G S G AGAGG++RD G WI G+++N+G +S+ +
Sbjct: 69 KEDTQVGWKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNA 128
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC 272
ELWA+Y GL L W+RGFRKV +E +S V + + +D N +I+ + L R+W+
Sbjct: 129 ELWAVYVGLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKGMLGRDWEV 188
Query: 273 KLQLILREANSCANWLAAHCENQPL---GSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
+ REAN A+WLA + + L GS V + PP L P+ D G TRS
Sbjct: 189 TTYHVYREANCVADWLANYGLTRDLLDRGS-DVLEEPPSGLYPLLYYDLIGSTVTRS 244
>gi|224141789|ref|XP_002324246.1| predicted protein [Populus trichocarpa]
gi|222865680|gb|EEF02811.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 104/177 (58%), Gaps = 4/177 (2%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS 212
+ ++++ W P +KLN++G S G AGAGG++R+ G WI G+++N+ +S+ +
Sbjct: 69 KEDTQVGWKYPQEERIKLNVDGCSKGNPGVAGAGGVIREHLGAWIGGFARNIDICSSVNA 128
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC 272
ELWA+Y GL L W+RGFRKV +E +S V + + +D N +I+ ++ L R+W+
Sbjct: 129 ELWAVYVGLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKDMLGRDWEV 188
Query: 273 KLQLILREANSCANWLAAHCENQPL---GSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
+ REAN A+WLA + ++ L GS V + PP L P+F D G TRS
Sbjct: 189 TTYHVYREANCVADWLANYGLSRDLLDRGS-DVLEEPPSGLYPLFYYDLIGSTGTRS 244
>gi|224108063|ref|XP_002314708.1| predicted protein [Populus trichocarpa]
gi|222863748|gb|EEF00879.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 102/177 (57%), Gaps = 4/177 (2%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS 212
+ ++++ W P +KLN++G S G AGAGG++RD G WI G+++N+G +S+ +
Sbjct: 69 KEDTQVGWKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNA 128
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC 272
ELWA+Y GL L W+RGFRKV +E +S V + + +D N +I+ + L RNW+
Sbjct: 129 ELWAVYVGLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKGMLGRNWEV 188
Query: 273 KLQLILREANSCANWLAAHCENQPL---GSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
+ REAN A+WLA + + L GS V + P L P+ D G + TRS
Sbjct: 189 TTYHVYREANCVADWLANYGLTRDLLDRGS-DVLEELPSGLYPLLYYDLIGSIVTRS 244
>gi|9759309|dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 676
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 92/163 (56%), Gaps = 1/163 (0%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
I W P WV +N +G+S G A AGG++RDE G W++G++ N+G ++ +ELW +
Sbjct: 506 IAWRKPAEGWVTMNTDGASHGNPGQATAGGVIRDEHGSWLVGFALNIGVCSAPLAELWGV 565
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLI 277
Y+GL + WERG+R+V +E +S V L+ P L+ C ++ ++W ++ +
Sbjct: 566 YYGLVVAWERGWRRVRLEVDSALVVGFLQSGIGDSHPLAFLVRLCHGFISKDWIVRITHV 625
Query: 278 LREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTG 320
REAN A+ LA + P G L + D+ P ++ I +D G
Sbjct: 626 YREANRLADGLANYAFTLPFGFL-LLDSCPEHVSSILLEDVMG 667
>gi|404481706|ref|YP_006666138.1| RnaseH (mitochondrion) [Malus x domestica]
gi|401661941|emb|CBX33402.1| rnaseH (mitochondrion) [Malus x domestica]
Length = 153
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Query: 181 GSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHE 240
GS GAGG++RD +G WI G++ NLG +A+ELW L+ GL L W RGFR V VE +S
Sbjct: 6 GSIGAGGLLRDNNGNWISGFTANLGKGKIIAAELWGLFFGLRLAWMRGFRSVEVEVDSAT 65
Query: 241 AVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSL 300
V + + L P LI C+ YL +W CKL I RE N A++LA+ LG
Sbjct: 66 VVTLVNQQDNSLHPLHTLIRGCQAYLKMDWHCKLSHIYREKNFSADYLASIGLTYDLGYF 125
Query: 301 AVFDTPPYALAPIFQKDSTGIVQTR 325
+PP P +DS G + R
Sbjct: 126 ES-QSPPPGCIPFLFEDSLGYARPR 149
>gi|87116463|dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 90/168 (53%), Gaps = 1/168 (0%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+ W PP + KLN +G+ A AGG++R+E+G W+ GY+ N+GT+NS +ELW L
Sbjct: 1730 VVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGL 1789
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLI 277
GL L RGF K++ E +S V+ L L+ C+ L + K+ I
Sbjct: 1790 REGLLLAKNRGFTKLIAETDSEAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIKVTHI 1849
Query: 278 LREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
LRE N CA++LA ++ G+ + + PP L Q+D+ G+ +R
Sbjct: 1850 LREGNQCADFLANLGQSSSWGT-TILERPPDDLRIFLQRDAIGLASSR 1896
>gi|4544460|gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 321
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 11/225 (4%)
Query: 104 GQKSNSSDLFTGRS---EKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICW 160
G K ++F G +++KF A ++ + N+ + + ++ R + W
Sbjct: 101 GWKWRCGNIFGGNGKCRDRVKFIKDLAEEVA---IANAFVKGNEV----RVSRVERLVSW 153
Query: 161 MPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHG 220
+ P WVKLN +G+S G A AGG++RD +G WI G++ N+G ++ +ELW +Y+G
Sbjct: 154 VSPEDGWVKLNTDGASRGNPGFATAGGVLRDHNGAWIGGFAVNIGVCSAPLAELWGVYYG 213
Query: 221 LNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILRE 280
L + W RG R+V +E +S V L + P L+ C ++L + W ++ + RE
Sbjct: 214 LFIAWGRGARRVELEVDSKMVVGFLTTGIADSHPLSFLLRLCYDFLSKGWIVRISHVYRE 273
Query: 281 ANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
AN A+ LA + + LG L + ++ P ++ I D G+ R
Sbjct: 274 ANRLADGLANYAFSLSLG-LHLLESRPDVVSSILLDDVAGVSYPR 317
>gi|9758579|dbj|BAB09192.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 308
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 120/252 (47%), Gaps = 12/252 (4%)
Query: 77 LYGKACGSHEKGDVNPATETMLSEPKQGQKSNSSDLF---TGRSEKIKFKISSARPLSKG 133
LY C D+ P + G K S++F T +++KF + +
Sbjct: 62 LYDNLCDRSSCEDI-PWSTIFAVIIWWGWKWRCSNIFGENTKCRDRVKFVKEWVVEVYRA 120
Query: 134 KLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDES 193
L N+++ + P R I W+ P WVK+N +G+S G A AGG++RD
Sbjct: 121 HLGNALVGSTQP-------RVERLIGWVLPCVGWVKVNTDGASRGNPGLASAGGVLRDCE 173
Query: 194 GKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLD 253
G W G+S N+G ++ +ELW +Y+GL WE+ +V +E +S V L+ S
Sbjct: 174 GAWCGGFSLNIGRCSAQHAELWGVYYGLYFAWEKKVPRVELEVDSEAIVGFLKTGISDSH 233
Query: 254 PNRALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPI 313
P L+ C +L ++W ++ + REAN A+ LA + LG FD P A++ +
Sbjct: 234 PLSFLVRLCHNFLQKDWLVRIVYVYREANCLADGLANYTILLSLG-FHSFDFVPDAMSSL 292
Query: 314 FQKDSTGIVQTR 325
++D+ G Q R
Sbjct: 293 LKEDTLGSTQLR 304
>gi|87116459|dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 90/168 (53%), Gaps = 1/168 (0%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+ W PP + KLN +G+ A AGG++R+E+G W+ GY+ N+GT+NS +ELW L
Sbjct: 1198 VVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGL 1257
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLI 277
GL L RGF K++ E +S V+ L L+ C+ L + K+ I
Sbjct: 1258 REGLLLAKNRGFTKLIAETDSEAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIKVTHI 1317
Query: 278 LREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
LRE N CA++LA ++ G+ + + PP L Q+D+ G+ +R
Sbjct: 1318 LREGNQCADFLANLGQSSSWGT-TILERPPDDLRIFLQRDAIGLASSR 1364
>gi|6630448|gb|AAF19536.1|AC007190_4 F23N19.5 [Arabidopsis thaliana]
Length = 233
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 92/173 (53%), Gaps = 1/173 (0%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS 212
R ++ W P W KLN +G+S G A AGG +R+E G+W G++ N+G + +
Sbjct: 58 RMERQVRWSKPSLGWCKLNTDGASHGNPGLATAGGALRNEYGEWCFGFALNIGRCLAPLA 117
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC 272
ELW +Y+GL + W+RG ++ +E +S V L P L+ C +L R+W
Sbjct: 118 ELWGVYYGLFMAWDRGITRLELEVDSEMVVGFLRTGIGSSHPLSFLVRMCHGFLSRDWIV 177
Query: 273 KLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
++ + REAN A+ LA + + PLG A F +PP +L I + D GI R
Sbjct: 178 RIGHVYREANRLADGLANYAFDLPLGYHA-FASPPNSLDSILRDDELGISVPR 229
>gi|116830483|gb|ABK28199.1| unknown [Arabidopsis thaliana]
Length = 315
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 118 EKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSS 177
++++F AR S ++ + E++ I W P W KLN +G+S
Sbjct: 110 DRVRFLKDLARETSMAHVIVRTLSGGHGERVERL------IAWSKPEEGWWKLNTDGASR 163
Query: 178 RAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECN 237
G A AGG++RDE G W G++ N+G ++ +ELW +Y+GL + WER ++ +E +
Sbjct: 164 GNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTRLEIEVD 223
Query: 238 SHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPL 297
S V L++ + + P L+ C +++ R+W ++ + REAN A+ LA + + PL
Sbjct: 224 SEIVVGFLKIGINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLADGLANYAFSLPL 283
Query: 298 GSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
G P +L I D++G +R
Sbjct: 284 G-FHSLSLVPDSLRFILLDDTSGATVSRQ 311
>gi|91805467|gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thaliana]
Length = 314
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 118 EKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSS 177
++++F AR S ++ + E++ I W P W KLN +G+S
Sbjct: 110 DRVRFLKDLARETSMAHVIVRTLSGGHGERVERL------IAWSKPEEGWWKLNTDGASR 163
Query: 178 RAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECN 237
G A AGG++RDE G W G++ N+G ++ +ELW +Y+GL + WER ++ +E +
Sbjct: 164 GNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTRLEIEVD 223
Query: 238 SHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPL 297
S V L++ + + P L+ C +++ R+W ++ + REAN A+ LA + + PL
Sbjct: 224 SEIVVGFLKIXINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLADGLANYAFSLPL 283
Query: 298 GSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
G P +L I D++G +R
Sbjct: 284 G-FHSLSLVPDSLRFILLDDTSGATVSRQ 311
>gi|8778482|gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]
Length = 253
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 1/177 (0%)
Query: 150 KIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS 209
+ R I W PP W KLN +G+S A AGG+VRD G W G+S N+G ++
Sbjct: 75 RTAREERLIAWSPPRVGWFKLNTDGASRGNPRLATAGGVVRDGDGNWCYGFSLNIGICSA 134
Query: 210 LASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRN 269
+ELW Y+GLN+ WERG ++ +E +S V L P L+ C L ++
Sbjct: 135 PLAELWGAYYGLNIAWERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCHGLLSKD 194
Query: 270 WDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
W ++ + REAN A+ LA + PLG +F++ P + I D G R+
Sbjct: 195 WSVRISHVYREANRLADGLANYAFFLPLG-FHLFNSTPDIVMSIVHDDVAGSAYPRN 250
>gi|4510429|gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197456|gb|AAM15081.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 314
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 118 EKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSS 177
++++F AR S ++ + E++ I W P W KLN +G+S
Sbjct: 110 DRVRFLKDLARETSMAHVIVRTLSGGHGERVERL------IAWSKPEEGWWKLNTDGASR 163
Query: 178 RAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECN 237
G A AGG++RDE G W G++ N+G ++ +ELW +Y+GL + WER ++ +E +
Sbjct: 164 GNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTRLEIEVD 223
Query: 238 SHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPL 297
S V L++ + + P L+ C +++ R+W ++ + REAN A+ LA + + PL
Sbjct: 224 SEIVVGFLKIGINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLADGLANYAFSLPL 283
Query: 298 GSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
G P +L I D++G +R
Sbjct: 284 G-FHSLSLVPDSLRFILLDDTSGATVSRQ 311
>gi|9665118|gb|AAF97302.1|AC007843_5 Hypothetical protein [Arabidopsis thaliana]
gi|55978717|gb|AAV68820.1| hypothetical protein AT1G17390 [Arabidopsis thaliana]
Length = 272
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 1/177 (0%)
Query: 150 KIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS 209
+ R I W PP W KLN +G+S A AGG+VRD G W G+S N+G ++
Sbjct: 94 RTAREERLIAWSPPRVGWFKLNTDGASRGNPRLATAGGVVRDGDGNWCYGFSLNIGICSA 153
Query: 210 LASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRN 269
+ELW Y+GLN+ WERG ++ +E +S V L P L+ C L ++
Sbjct: 154 PLAELWGAYYGLNIAWERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCHGLLSKD 213
Query: 270 WDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
W ++ + REAN A+ LA + PLG +F++ P + I D G R+
Sbjct: 214 WSVRISHVYREANRLADGLANYAFFLPLG-FHLFNSTPDIVMSIVHDDVAGSAYPRN 269
>gi|87116466|dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 89/168 (52%), Gaps = 1/168 (0%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+ W PP + KLN +G+ A AGG++R+E+G W+ GY N+GT+NS +ELW L
Sbjct: 1198 VVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYICNIGTANSFLAELWGL 1257
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLI 277
GL L RGF K++ E +S V+ L L+ C+ L + K+ I
Sbjct: 1258 REGLLLAKNRGFTKLIAETDSEAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIKVTHI 1317
Query: 278 LREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
LRE N CA++LA ++ G+ + + PP L Q+D+ G+ +R
Sbjct: 1318 LREGNQCADFLANLGQSSSWGT-TILERPPDDLRIFLQRDAIGLASSR 1364
>gi|124361129|gb|ABN09101.1| Ribonuclease H [Medicago truncatula]
Length = 170
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 96/169 (56%), Gaps = 1/169 (0%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
I W PP +K+N++GSS G AG GG++R++ G WI G+S++ G ++L EL+A+
Sbjct: 2 IAWHPPTAPGLKINVDGSSFGNPGRAGFGGLIRNDVGGWIHGFSESCGRVSNLLVELYAI 61
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLI 277
+GL L W+ GFR + +E + A+ + + P+ ++ R + R+W
Sbjct: 62 LNGLQLAWDLGFRIITLEPDYKSALDLILDNDTTYHPHAIVLGRIRTLMSRDWSLLFNHT 121
Query: 278 LREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
LRE N CA+WLA + + Q SL ++ +PP A + D++ +++ RS
Sbjct: 122 LREGNECADWLAKY-DAQSDVSLKLWVSPPPQFAHVLLADASCVLRLRS 169
>gi|158828300|gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
Length = 799
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 2/173 (1%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS 212
R + W+ P W+KLN +G+S G A AGGI+R + G WI G++ N+G ++ +
Sbjct: 619 RIERMVSWVKPAEGWLKLNTDGASKGNPGLATAGGILRQQDGSWIGGFAVNIGICSAPLA 678
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC 272
ELW +Y+GL + WER ++ VE +S V L S P L+ C ++ R+W
Sbjct: 679 ELWRVYYGLYIAWERKITRLEVEVDSELVVGFLTTWISDSHPLSFLVRLCYGFISRDWIV 738
Query: 273 KLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
++ + REAN A+ LA + + PLG FD + + +D G V+TR
Sbjct: 739 RISHVYREANRLADGLANYASSLPLG-FHSFDVCLKIVYSVLVEDKNG-VRTR 789
>gi|3746069|gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 6/174 (3%)
Query: 152 HRPNS-----RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT 206
+RPN I W P WVK+ +G+S G A AGG +R+ G+W+ G++ N+G+
Sbjct: 1050 NRPNGVRVERMIRWQVPSDGWVKITTDGASRGNHGLAAAGGAIRNGQGEWLGGFALNIGS 1109
Query: 207 SNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL 266
+ +ELW Y+GL + W++GFR+V ++ + V L S P L+ C+ +
Sbjct: 1110 CAAPLAELWGAYYGLLIAWDKGFRRVELDLDCKLVVGFLSTGVSNAHPLSFLVRLCQGFF 1169
Query: 267 CRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTG 320
R+W ++ + REAN A+ LA + PLG L FD P + + D G
Sbjct: 1170 TRDWLVRVSHVYREANRLADGLANYAFTLPLG-LHCFDACPEGVRLLLLADVNG 1222
>gi|6686397|gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
Length = 1055
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 94/173 (54%), Gaps = 1/173 (0%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS 212
R I W+ P WVK+N +G+S G A AGG++RD +G W G+S N+G ++ +
Sbjct: 554 RVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQA 613
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC 272
ELW +Y+GL WE+ +V +E +S V L+ S P L+ C +L ++W
Sbjct: 614 ELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLVRLCHGFLQKDWLV 673
Query: 273 KLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
++ + REAN A+ LA + + LG FD P A++ + ++D+ G + R
Sbjct: 674 RIVHVYREANRLADGLANYAFSLSLG-FHSFDLVPDAMSSLLREDTLGSTRPR 725
>gi|125987635|sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
Length = 620
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 8/208 (3%)
Query: 118 EKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSS 177
+++KF A + + N ++ P R I W+ P WVK+N +G+S
Sbjct: 417 DRVKFVKEWAVEVYRAHSGNVLVGITQP-------RVERMIGWVSPCVGWVKVNTDGASR 469
Query: 178 RAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECN 237
G A AGG++RD +G W G+S N+G ++ +ELW +Y+GL WE+ +V +E +
Sbjct: 470 GNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVD 529
Query: 238 SHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPL 297
S V L+ S P L+ C +L ++W ++ + REAN A+ LA + + L
Sbjct: 530 SEVIVGFLKTGISDSHPLSFLVRLCHGFLQKDWLVRIVHVYREANRLADGLANYAFSLSL 589
Query: 298 GSLAVFDTPPYALAPIFQKDSTGIVQTR 325
G FD P A++ + ++D+ G + R
Sbjct: 590 G-FHSFDLVPDAMSSLLREDTLGSTRPR 616
>gi|224133020|ref|XP_002327939.1| predicted protein [Populus trichocarpa]
gi|222837348|gb|EEE75727.1| predicted protein [Populus trichocarpa]
Length = 248
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 3/173 (1%)
Query: 155 NSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASEL 214
N+ I W PP +VKLN + S + G+ RDE G W+ G+S + + ++ +EL
Sbjct: 50 NTGIHWKKPPLGFVKLNTDASYKYNCSKSSVAGVCRDEHGIWLFGFSSRVKSGSAFEAEL 109
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNR--ALILSCREYLCRNWDC 272
A+ L L W++G ++V+VE +S V + + N+ A+IL C+ Y+ R W+C
Sbjct: 110 LAVREALKLAWDKGLKRVIVESDSESVVNRIRNQLTRQPKNQIEAVILECQSYVSREWNC 169
Query: 273 KLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
LQ RE N A+ L ++ L VF+ PP +L+ I D G+ R
Sbjct: 170 FLQHTHREGNFAADALTKIIISESF-ELHVFNHPPKSLSLILLADKIGMAVPR 221
>gi|3327392|gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 970
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 1/171 (0%)
Query: 150 KIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS 209
K R I W P WVKL +G+S QG A A G + + G+W+ G++ N+G+ ++
Sbjct: 792 KRARVERMIRWKAPSDRWVKLTTDGASRGHQGLAAASGAILNLQGEWLGGFALNIGSCDA 851
Query: 210 LASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRN 269
+ELW Y+GL + W++GFR+V + +S V L S P L+ C+ + R+
Sbjct: 852 PLAELWGAYYGLLIAWDKGFRRVELNLDSELVVGFLSTGISKAHPLSFLVRLCQGFFTRD 911
Query: 270 WDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTG 320
W ++ + REAN A+ LA + PLG F+ P + +D+ G
Sbjct: 912 WLVRVSHVYREANRLADGLANYAFFLPLG-FHCFEICPEDVLLFLVEDANG 961
>gi|224129144|ref|XP_002328901.1| predicted protein [Populus trichocarpa]
gi|222839331|gb|EEE77668.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 89/168 (52%), Gaps = 3/168 (1%)
Query: 156 SRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELW 215
S I W PP +VKLN + S + G+ RDE G W+ G+S + + ++ +EL
Sbjct: 47 SGIRWNKPPPGFVKLNTDASYKYISSKSSIAGVCRDEHGIWLFGFSCRVKSESAFEAELL 106
Query: 216 ALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNR--ALILSCREYLCRNWDCK 273
A+ L L W++G +KV++E +S VK + + N+ A+IL C+ Y+ R+WDC
Sbjct: 107 AVREALKLAWDKGLKKVILESDSENVVKRIRNQVTRQPKNQFEAVILECQAYVNRDWDCF 166
Query: 274 LQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGI 321
+Q LRE N A+ L ++ L V+ PP +L+ I D G+
Sbjct: 167 IQHTLREGNFAADALTKIGISESF-ELHVWKHPPESLSLILLADKIGM 213
>gi|255578924|ref|XP_002530315.1| nuclease, putative [Ricinus communis]
gi|223530171|gb|EEF32082.1| nuclease, putative [Ricinus communis]
Length = 219
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 4/172 (2%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASELWA 216
+ W+PPP W K+N +G+ ++ G A A G+ R+ +G+W G++ L ++ +EL+
Sbjct: 44 VGWIPPPQGWFKINTDGTWKKSSGIATAAGLFRNCNGQWCGGFAIKLRDCYSAFVAELFG 103
Query: 217 LYHGLNLVWERGFRKVLVECNSHEAVKCLELPAS---FLDPNRALILSCREYLCRNWDCK 273
+ +GLN+ W GFR +++E ++ +V + + D LI S +E L + W+ K
Sbjct: 104 ILNGLNIAWNAGFRNIILETDNKTSVDKIYGDSDTKRMGDLEDLLITSIKEMLTKEWNIK 163
Query: 274 LQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
LQ RE N A+ LA + G + PP + + +D G+ R
Sbjct: 164 LQHQYREGNRVADALANFAVDFSPGQIVALHYPPESTISLLMEDIWGMKFPR 215
>gi|124359646|gb|ABD32321.2| Ribonuclease H [Medicago truncatula]
Length = 220
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
I W P +KLN +G+ AG GG+ RD G+WI GY+K +G ++L +E+W L
Sbjct: 50 IGWKRPREGLIKLNSDGACKDMGVIAGCGGLFRDLDGRWIKGYTKKIGACDALHAEMWGL 109
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLI 277
Y GL++ W + ++VE +S + + F L+ R+ L +W+ +L
Sbjct: 110 YLGLDMAWREHYSHLIVESDSKILIDMISDNFKFNGNIPVLVYRIRKLLKTSWNVQLNHT 169
Query: 278 LREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGI 321
RE N A+WLA + + V ++PP + F +G+
Sbjct: 170 WREGNRSADWLANLSISTYHFNFIVLESPPCEVKESFLMIYSGL 213
>gi|255564066|ref|XP_002523031.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223537714|gb|EEF39335.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 209
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 10/176 (5%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS 212
R I W PP +W KLN GS +A+G A + G++ D+ G W+ G+ + A+
Sbjct: 35 REELLIGWNPPTVSWFKLNTNGSVQKARGVATSRGVIHDDIGNWLRGFFMKMSFCIVTAT 94
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCL---ELPASFLDPNRALILSCREYLCRN 269
ELW LY GL L W+ G R++ VE ++ VK + + AS L LI S L RN
Sbjct: 95 ELWGLYQGLELAWKIGIRRIQVEVDNKRVVKLIYGHRVHASCLI---LLIASIHHLLSRN 151
Query: 270 WDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
W + + +++ AN LA + PL + P + ++D+ GI R
Sbjct: 152 WQVNIGHVYCKSSKVANCLAV---SFPL-VVHELVVSPLKTHALLRQDALGICYPR 203
>gi|357509573|ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
gi|355500090|gb|AES81293.1| TMV resistance protein N [Medicago truncatula]
Length = 1579
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 71/127 (55%)
Query: 163 PPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLN 222
P ++KLN++G SAG GG+ RD G W+ G+ +LG + + +EL+A+ GL
Sbjct: 1361 PTRRFIKLNVDGCCMDNPRSAGYGGLFRDVDGNWLGGFYGSLGFTTKMKAELYAICQGLI 1420
Query: 223 LVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREAN 282
W+ G+R +LVE + EA+K +E D +L+ R + RNW L L+E N
Sbjct: 1421 TAWDFGYRNILVETDYLEAIKHIEEANIEHDAYGSLVADIRSLMQRNWSLNLDHSLKEDN 1480
Query: 283 SCANWLA 289
+CA+ L+
Sbjct: 1481 ACADILS 1487
>gi|87241451|gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
Length = 1378
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 71/127 (55%)
Query: 163 PPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLN 222
P ++KLN++G SAG GG+ RD G W+ G+ +LG + + +EL+A+ GL
Sbjct: 1178 PTRRFIKLNVDGCCMDNPRSAGYGGLFRDVDGNWLGGFYGSLGFTTKMKAELYAICQGLI 1237
Query: 223 LVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREAN 282
W+ G+R +LVE + EA+K +E D +L+ R + RNW L L+E N
Sbjct: 1238 TAWDFGYRNILVETDYLEAIKHIEEANIEHDAYGSLVADIRSLMQRNWSLNLDHSLKEDN 1297
Query: 283 SCANWLA 289
+CA+ L+
Sbjct: 1298 ACADILS 1304
>gi|158828157|gb|ABW81036.1| unknown [Arabidopsis lyrata subsp. lyrata]
Length = 172
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Query: 161 MPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHG 220
+ P W K+N +G+S G A A G++R+ GKW G++ N+G ++ +ELW +Y+G
Sbjct: 5 VAPEDGWSKMNTDGASQGNPGLATASGVLRNSDGKWCGGFALNIGRCSAPLAELWGVYYG 64
Query: 221 LNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILRE 280
L WE ++++E +S V L P L+ C ++ R+W ++ + R+
Sbjct: 65 LYTAWEHRVTRLVLEVDSSLVVGFLTTGIGDSHPLSILVRLCYGFIARDWIVRVTHVYRK 124
Query: 281 ANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTG 320
AN A+ LA + + PLG F + P + + D G
Sbjct: 125 ANRFADGLANYVFSLPLG-FHDFVSVPVVVDSFLRDDVVG 163
>gi|11072016|gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]
Length = 803
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 2/152 (1%)
Query: 175 SSSRAQ-GSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVL 233
S+SR G A AGG++RD +G W G++ N+G ++ +ELW +Y+G L W + +V
Sbjct: 649 SASRGNPGLATAGGVIRDGAGNWCGGFALNIGRCSAPLAELWGVYYGFYLAWTKALTRVE 708
Query: 234 VECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLAAHCE 293
+E +S V L+ P L+ C L ++W ++ + REAN A+ LA +
Sbjct: 709 LEVDSELVVGFLKTGIGDQHPLSFLVRLCHGLLSKDWIVRITHVYREANRLADGLANYAF 768
Query: 294 NQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
+ PLG ++ D P L I +DS G + R
Sbjct: 769 SLPLGFHSLIDVPD-DLEVILHEDSLGSTRPR 799
>gi|22327532|ref|NP_680382.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|332007502|gb|AED94885.1| RNase H domain-containing protein [Arabidopsis thaliana]
Length = 258
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 77 LYGKACGSHEKGDVNPATETMLSEPKQGQKSNSSDLF---TGRSEKIKFKISSARPLSKG 133
LY C D+ P + G K S++F T +++KF + +
Sbjct: 62 LYDNLCDRSSCEDI-PWSTIFAVIIWWGWKWRCSNIFGENTKCRDRVKFVKEWVVEVYRA 120
Query: 134 KLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDES 193
L N+++ + P R I W+ P WVK+N +G+S G A AGG++RD
Sbjct: 121 HLGNALVGSTQP-------RVERLIGWVLPCVGWVKVNTDGASRGNPGLASAGGVLRDCE 173
Query: 194 GKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLD 253
G W G+S N+G ++ +ELW +Y+GL WE+ +V +E +S V L+ S
Sbjct: 174 GAWCGGFSLNIGRCSAQHAELWGVYYGLYFAWEKKVPRVELEVDSEAIVGFLKTGISDSH 233
Query: 254 PNRALILSCREYLCRNWDCKLQLI 277
P L+ C +L ++W L L+
Sbjct: 234 PLSFLVRLCHNFLQKDWRILLGLL 257
>gi|255560503|ref|XP_002521266.1| conserved hypothetical protein [Ricinus communis]
gi|223539534|gb|EEF41122.1| conserved hypothetical protein [Ricinus communis]
Length = 149
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 152 HRPNSRIC---WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSN 208
H P ++ W PP NW+K NI+G S GSA GG+ RD G+ ++G+ N+G +
Sbjct: 10 HEPRMQVILVGWDPPLENWIKFNIDGCSKGNPGSAAGGGVFRDYRGRCVVGFMCNIGYCS 69
Query: 209 SLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCR 268
++ +ELWA +HGL + W +G RK+++ +S A+ L + L+ SC L
Sbjct: 70 AIGAELWAAFHGLTIAWNKGLRKLVLAMDSTLALYWLSKRSICNSHLSNLVHSCSAILSY 129
Query: 269 NWDCKLQLILREANS 283
D KL + RE +
Sbjct: 130 ELDAKLVHVHREKGT 144
>gi|332322102|emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1363
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W PP ++KLN +G+ +AG GG+ RD G W LG++K + + A+EL A+
Sbjct: 1198 WKPPHQGFLKLNTDGAWKADWENAGIGGVFRDAVGNWELGFAKRVDAGSPEAAELMAIRE 1257
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCLELPASFLD-PNRALILSCREYLCRNWDCKLQLIL 278
GL + W+ + K+ VEC++ V+ L P + P +++ L R+W + I
Sbjct: 1258 GLQVAWDCNYHKLEVECDAKGVVQLLAKPLEAENHPLGVIVMDICILLTRHWSVEFLHIK 1317
Query: 279 REANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQT 324
RE N A+ LAA NQ + +F PP ++ KD + +
Sbjct: 1318 REGNKVAHCLAAEAVNQ-VEERVIFINPPEHAKEVYFKDKEFVASS 1362
>gi|356506312|ref|XP_003521929.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 192
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 15/179 (8%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLA 211
RP + W PPP + KLN +G+ + AGG++RD G++ILG+S L S++L
Sbjct: 23 RPTRLVWWTPPPRGFFKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALE 82
Query: 212 SELWALYHGLNLVWERGFRKVLVECNSHEAVKCLEL-PASFLDPNRALILSCREYLCRNW 270
+ELWA+ G+ V RG+R ++VE +S +A++ + FL + + + +C N
Sbjct: 83 AELWAIKIGMQTVVARGYRNLIVESDSLKAIQIINAHKGDFLRSSIQHMTRMVDRICWN- 141
Query: 271 DCKLQLILREANSCANWLAAH----CENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
+ RE NS A+ A H ++Q S+ VFD+ P + D G + R
Sbjct: 142 -----HVYRETNSVADGFAKHGLSLSQDQ---SIRVFDSAPDFIESRLYGDRIGKIYCR 192
>gi|356506310|ref|XP_003521928.1| PREDICTED: uncharacterized protein LOC100812157 [Glycine max]
Length = 551
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 15/180 (8%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLA 211
RP + W PPP + KLN +G+ + AGG++RD G++ILG+S L S++L
Sbjct: 121 RPTRLVWWTPPPRGFFKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALE 180
Query: 212 SELWALYHGLNLVWERGFRKVLVECNSHEAVKCLEL-PASFLDPNRALILSCREYLCRNW 270
+ELWA+ G+ V RG+R ++VE +S +A++ + FL + + + +C N
Sbjct: 181 AELWAIKIGMQTVVARGYRNLIVESDSLKAIQIINAHKGDFLRSSIQHMTRMVDRICWNH 240
Query: 271 DCKLQLILREANSCANWLAAH----CENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
+ RE NS A+ A H ++Q S+ VFD+ P + D G + RS
Sbjct: 241 ------VYRETNSVADGFAKHGLSLSQDQ---SIRVFDSAPDFIESRLYGDRIGKIYCRS 291
>gi|124360796|gb|ABN08768.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 275
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 85/184 (46%), Gaps = 21/184 (11%)
Query: 143 DCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSK 202
D G HR + W P W++LN + +S R G+GG+ R+ GKWI G+S
Sbjct: 108 DSIVGGHTKHRVEVDVMWKKPEGGWIRLNTDVASKR-DIPTGSGGLFRNAEGKWISGFSH 166
Query: 203 NLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSC 262
NL N+ SEL ++ GL + ERGF KV + +S V L+
Sbjct: 167 NLSRCNAYLSELCGVFDGLQIARERGFSKVELHVDSSVVVWTLQTTKD------------ 214
Query: 263 REYLCRNWDCKLQLILREANSCANWLA-AHCENQPLGSLAVFDTPPYALAPIFQKDSTGI 321
+W+ K+ RE NSCA+ LA CE+ P L V++ P L+ + D GI
Sbjct: 215 -----GSWEVKICHSYREVNSCADTLANMDCEHAP--GLRVYEQCPARLSSMLLADVMGI 267
Query: 322 VQTR 325
+R
Sbjct: 268 TTSR 271
>gi|255579446|ref|XP_002530566.1| nuclease, putative [Ricinus communis]
gi|223529865|gb|EEF31796.1| nuclease, putative [Ricinus communis]
Length = 177
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 161 MPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LASELWALYH 219
+PPP W K+N +G+ ++ G A A G+ R+ G+W ++ L S +EL ++ +
Sbjct: 5 VPPPEGWFKINTDGTWKKSFGIATAAGLFRNSDGQWCGAFAIKLTDCYSAFVAELCSILN 64
Query: 220 GLNLVWERGFRKVLVECNSHEAV---------KCLELPASFLDPNRALILSCREYLCRNW 270
GL + W+ GF+ +++E ++ +V KC+ D LI S +E L W
Sbjct: 65 GLKIAWDAGFKNIILETDNKISVDTIYGDFDTKCIG------DLEDLLITSIKEMLAMAW 118
Query: 271 DCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTG 320
+ KLQ RE N A LA + P G + + D PP + + +D G
Sbjct: 119 NVKLQHQYREGNQVAEALANFAVDFPPGKMVMLDYPPESTINLLIEDMHG 168
>gi|388521063|gb|AFK48593.1| unknown [Lotus japonicus]
Length = 272
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 140 IDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILG 199
+D D P +H P + W + V LN++GS G GG R G W+ G
Sbjct: 93 VDVDAP-----MHTPR-LVRWTVGLADCVVLNVDGSVHGTPQRGGFGGCFRTIHGNWLRG 146
Query: 200 YSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALI 259
+ L L EL ++HGL+L WE+G+R V + +S +AV ++ S AL+
Sbjct: 147 FFGYLDECCILHLELLGMFHGLSLAWEQGYRIVECQSDSQDAVTLVKSTPSSCHRYAALV 206
Query: 260 LSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDST 319
++ R+W +L+ LRE N+CA+ L H +Q L + + P L + D+
Sbjct: 207 WDIKDLQSRDWIVELRHTLREGNACADLLVKHGADQN-DDLVITENPIAGLGVLLLADAR 265
Query: 320 GIVQTR 325
G+ R
Sbjct: 266 GVSFVR 271
>gi|356506308|ref|XP_003521927.1| PREDICTED: uncharacterized protein LOC100811627 [Glycine max]
Length = 445
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 15/179 (8%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLA 211
RP + W PPP + KLN +G+ + AGG++RD G++ILG+S L S++L
Sbjct: 121 RPTRLVWWTPPPRGFFKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALE 180
Query: 212 SELWALYHGLNLVWERGFRKVLVECNSHEAVKCLEL-PASFLDPNRALILSCREYLCRNW 270
+ELWA+ G+ V RG+R ++VE +S +A++ + FL + + + +C N
Sbjct: 181 AELWAIKIGMQTVVARGYRNLIVESDSLKAIQIINAHKGDFLRSSIQHMTRMVDRICWNH 240
Query: 271 DCKLQLILREANSCANWLAAH----CENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
+ RE NS A+ A H ++Q S+ VFD+ P + D G + R
Sbjct: 241 ------VYRETNSVADGFAKHGLSLSQDQ---SIRVFDSAPDFIESRLYGDRIGKIYCR 290
>gi|388514359|gb|AFK45241.1| unknown [Lotus japonicus]
Length = 165
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W P +WVKLN +GS S + A GG+ RD G ++LG++ +G + L +ELW L H
Sbjct: 29 WTPTLESWVKLNTDGSYSVDEDCAACGGVPRDHHGNFLLGFTMKVGVCSILHAELWGLVH 88
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILR 279
GL V RGF K+L+E +S ++ L + P L+ + +N + + R
Sbjct: 89 GLRFVLGRGFSKILIEADSAGTIEFLNKGCPVVHPCFPLVREFHHLVGQNCYIHWKHVYR 148
Query: 280 EANSCANWLA 289
E N A+ A
Sbjct: 149 EVNFVADSFA 158
>gi|255550265|ref|XP_002516183.1| conserved hypothetical protein [Ricinus communis]
gi|223544669|gb|EEF46185.1| conserved hypothetical protein [Ricinus communis]
Length = 283
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+ W+PP W KLN +G + + AG GGI+RD G + +ELWA+
Sbjct: 122 VSWIPPGEGWFKLNADGCCKQVRRIAGGGGIIRDSIG---------------MGAELWAV 166
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLI 277
GL L W GF K+LVE +S L + ++L+C + L R+W + I
Sbjct: 167 LQGLILAWNNGFHKLLVEVDSAIVADWLSSKNKCNGIHSNMVLACLDILKRDWSASIGHI 226
Query: 278 LREANSCANWLAAHCENQPLGSLAVFDTP--PYALAPIFQKDSTGI 321
REAN A+ LA + P+G + + P PY + + +D G+
Sbjct: 227 YREANQVADCLANLALSYPVG---IHELPMVPYEVKTLVNEDCIGV 269
>gi|224153777|ref|XP_002337395.1| predicted protein [Populus trichocarpa]
gi|222838968|gb|EEE77319.1| predicted protein [Populus trichocarpa]
Length = 124
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Query: 193 SGKWILGYSKNLGTSNS-LASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASF 251
SG WI G++ NLG S ++SELW ++ GL WE G RKVLV+ +S AV+ L+
Sbjct: 13 SGNWIPGFTLNLGKRRSFMSSELWGIFEGLMFAWEEGIRKVLVQSDSRVAVESLKRAPDA 72
Query: 252 LDPNRALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPL 297
DPNR LI C + R WDCK++ I REAN A +AA+ EN L
Sbjct: 73 FDPNRELINCCINLIKRKWDCKVEYIDREANLAAKAVAANFENLSL 118
>gi|224105699|ref|XP_002313904.1| predicted protein [Populus trichocarpa]
gi|222850312|gb|EEE87859.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Query: 159 CWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALY 218
C +N L +EG+S + G GG+VRD GKW++G+S G +L EL +
Sbjct: 81 CRQMVSSNDSFLFLEGNSRKI----GLGGLVRDNEGKWLVGFSSIGGFDTNLLPELLDIK 136
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
HGL L W +G+RK++ +S A + + +I+ ++ L R W+ L +L
Sbjct: 137 HGLVLAWNQGYRKIICNLDSINASRRIHDGNFIFQKLGVVIVDTKKLLSREWEVHLLHLL 196
Query: 279 REANSCANWLAAH 291
REANSCA+++A H
Sbjct: 197 REANSCADFMAKH 209
>gi|124484375|dbj|BAF46298.1| hypothetical protein [Ipomoea nil]
Length = 212
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+CW P + + LNI+GS + +AG GG +R++ G W+ G++ + A E A+
Sbjct: 37 LCWNPSKNSRLTLNIDGSVKASTNNAGIGGALREDKGTWLGGFAYKIPLETPEAIEAKAI 96
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLI 277
G+ +WERG R+ ++ ++ + V+ ++ + P + +I R +L ++W ++ +
Sbjct: 97 VLGMQWLWERGVREAEIQSDARKVVEWIQASDNLRGPIQGIIEEARLWLTKDWKISIRAV 156
Query: 278 LREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
RE N A+ LA + Q + F + P + +D + R
Sbjct: 157 YREQNRVADALAGYGAFQS-DAWTTFSSRPIISKEAYLQDIARVTSAR 203
>gi|124359343|gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 729
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Query: 112 LFTGRSEKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSR-----ICWMPPPTN 166
L+ R++ I F+I RP S LV + + +H+ + + I WM PP
Sbjct: 577 LWNWRNKSI-FEIGFQRP-SNPTLVIQKFTREIEDNTKLVHKSSHQKETIYIGWMRPPFG 634
Query: 167 WVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWE 226
WVKLN +G+ + AG GG++RD G+WI GY K +G ++ +E+W +Y GL++ W
Sbjct: 635 WVKLNCDGAWKGSGTLAGCGGLLRDSDGRWIKGYFKKIGMCDAFHAEMWGMYLGLDMAWR 694
Query: 227 RGFRKVLVECNS 238
++VE +S
Sbjct: 695 ENTTHLIVESDS 706
>gi|255555665|ref|XP_002518868.1| conserved hypothetical protein [Ricinus communis]
gi|223541855|gb|EEF43401.1| conserved hypothetical protein [Ricinus communis]
Length = 186
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 23/168 (13%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+CW PPP+++ KLN +G ++ G GG++RD +G+W+ G+S N+ + +ELW +
Sbjct: 35 LCWNPPPSSFFKLNTDGVVHQSSGHGYVGGLIRDTNGRWVAGFSINISLCSITCAELWGV 94
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLI 277
Y GL L G ++VE +S E ++ ++ I
Sbjct: 95 YQGLMLANRLGIVNLMVEVDSMAVTTFAERMST----------------------TVKHI 132
Query: 278 LREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
RE N A+ LAA N G + P L P D G+ R
Sbjct: 133 YRETNRAADRLAAFAVNLSRG-VHTLQQAPLELVPWLLHDIVGVSYNR 179
>gi|255541964|ref|XP_002512046.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223549226|gb|EEF50715.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 244
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWA 216
I W PP T +KLN +G+ G A AGG++RD G+WI G+ +G S S+ +EL
Sbjct: 75 ISWEPPTTGCMKLNTDGAKRGEDGPAAAGGLIRDSRGRWIRGFKCYMGLGSTSVKAELLG 134
Query: 217 LYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQL 276
L GL L + G K++VE ++ V+ +++ + + N L ++ L + W+ +Q
Sbjct: 135 LIEGLKLARKIGCEKLIVETDNEGVVQMIKIKTNRQNDNYILASEIQQLLQKGWE--VQH 192
Query: 277 ILREANSCANWLAAHCENQP 296
+ N CA+ LA + +P
Sbjct: 193 CKNKQNRCADRLANYGLEEP 212
>gi|144923506|gb|ABE80133.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 282
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Query: 112 LFTGRSEKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSR-----ICWMPPPTN 166
L+ R++ I F+I RP S LV + + +H+ + + I WM PP
Sbjct: 130 LWNWRNKSI-FEIGFQRP-SNPTLVIQKFTREIEDNTKLVHKSSHQKETIYIGWMRPPFG 187
Query: 167 WVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWE 226
WVKLN +G+ + AG GG++RD G+WI GY K +G ++ +E+W +Y GL++ W
Sbjct: 188 WVKLNCDGAWKASGTFAGCGGLLRDSDGRWIKGYFKKIGMCDAFHAEMWGMYLGLDMAWR 247
Query: 227 RGFRKVLVECNS 238
++V+ +S
Sbjct: 248 ENTTHLIVDSDS 259
>gi|388492824|gb|AFK34478.1| unknown [Lotus japonicus]
Length = 178
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS----ELW 215
W PP ++K N +GS G+GG++RD GKW+ G+ + N LAS E
Sbjct: 12 WQPPEEGFIKCNSDGSYREESQVMGSGGVLRDHRGKWLGGFYSKV-PDNPLASPFMAEAC 70
Query: 216 ALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASF-LDPNRALILSCREYLCRNWDCKL 274
AL L L W++G RK+ E + V LE + L +++ S +E L RNW L
Sbjct: 71 ALRDVLRLAWDQGHRKIRCETDCANLVSTLEDGDNLHLHSAYSVLFSIKELLTRNWLVTL 130
Query: 275 QLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDS 318
+I RE N ++LA V + P L + KDS
Sbjct: 131 NVISRECNKAVDYLAKLGAAAATTDFWVLNQPDVELEVLLIKDS 174
>gi|7267526|emb|CAB78008.1| putative protein [Arabidopsis thaliana]
gi|7321072|emb|CAB82119.1| putative protein [Arabidopsis thaliana]
Length = 947
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS 212
R + W PP WVKLN +G+S G A GG++RD G W G++ ++G ++ +
Sbjct: 834 RVERLVAWKPPDGEWVKLNTDGASRGNLGLATTGGVLRDGIGHWCGGFALDIGVCSAPLA 893
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL 266
ELW +Y+GL + WER F +V +E +S V L S L+ C +L
Sbjct: 894 ELWGVYYGLYMAWERRFTRVELEVDSELVVGFLTTGISDTHSLSFLVRLCHGFL 947
>gi|106879579|emb|CAJ38373.1| putative reverse transcriptase [Plantago major]
Length = 227
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 15/142 (10%)
Query: 160 WMPPPTNWVKLNIEGS----SSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELW 215
W P W KLNI+GS ++G + AGG++RD SGKW+ G++ L +S +SEL
Sbjct: 46 WERPQPGWYKLNIDGSVETQPGMSKGPSTAGGLIRDHSGKWVFGFTAKLPDCDSASSELH 105
Query: 216 ALYHGLNLVWERGFRKVL-VECNSHEAVKCLELPASFLDPNRA--LILSCREYLCR---- 268
A+ HGL L ++G+ L VE + AV+ + P F D ++ ++ CRE L +
Sbjct: 106 AIRHGLKLARDKGYEHNLEVETDFKGAVRLINNPERFADNHKYGNILRECRELLEQLGVG 165
Query: 269 -NWDCKLQLILREANSCANWLA 289
N L+ + R N CA+ L
Sbjct: 166 IN---DLRAVKRYQNECADRLT 184
>gi|388491978|gb|AFK34055.1| unknown [Lotus japonicus]
Length = 217
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL----GTSNSLASELW 215
W P W+KLN++GS SAG GG++RD SGKWI G++K L G E
Sbjct: 58 WTKPKMGWIKLNVDGSLQSE--SAGCGGVLRDSSGKWISGFAKKLAHPGGGHCPHKPEEE 115
Query: 216 ALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL----CRNWD 271
AL GL WERG +V VE + V ++ ++ D L RE + R+W+
Sbjct: 116 ALCRGLQWAWERGENRVEVESDRQGLVDSVKSGSTTSD------LVIREIMDLLYNRDWE 169
Query: 272 CKLQLILREANSCANWLAAHCENQPLGSLAVFDTPP 307
L I +AN A+ LA P L +DTPP
Sbjct: 170 ATLNWIPGDANRVADELADIARGLPSFQLREYDTPP 205
>gi|388509180|gb|AFK42656.1| unknown [Lotus japonicus]
Length = 283
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL----GTSNSLAS 212
++ W P W+KLN++GS SAG GG++RD GKWI G++ G
Sbjct: 121 KVLWTKPKMGWIKLNVDGSLRSE--SAGCGGVLRDSFGKWISGFAVKFAHPGGGHCPHKP 178
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLC-RNWD 271
E AL GL WERG +V VE + V ++ ++ D +I R+ L R+W+
Sbjct: 179 EEEALCRGLQWAWERGENRVEVESDRKGLVDSVKSGSTTSD---LVICEIRDLLYNRDWE 235
Query: 272 CKLQLILREANSCANWLAAHCENQPLGSLAVFDTPP 307
L I +AN A+ LA P L V+DTPP
Sbjct: 236 ATLNWIPGDANRVADELADIARGLPSFQLKVYDTPP 271
>gi|255590398|ref|XP_002535256.1| conserved hypothetical protein [Ricinus communis]
gi|223523623|gb|EEF27126.1| conserved hypothetical protein [Ricinus communis]
Length = 120
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%)
Query: 181 GSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHE 240
G A GG++RD +G WI G+ NLG + + +EL +YHGL L W +G +KV++E +
Sbjct: 10 GRASLGGLIRDHNGDWIRGFMANLGVYSVMFAELQGIYHGLCLAWSKGIKKVVLEAYNLS 69
Query: 241 AVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLA 289
L N AL+ R+ + R W ++ I +E N CAN LA
Sbjct: 70 IKMVLNRAKDGCIQNIALVKEIRKMITREWQIQVTHINQEGNKCANLLA 118
>gi|388507714|gb|AFK41923.1| unknown [Lotus japonicus]
Length = 229
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSL- 210
RPN + W P W+KLN++GS SAG GG++RD SGKWI G++ L
Sbjct: 61 QRPNKEV-WTKPRRGWLKLNVDGSLLPDPLSAGCGGVLRDSSGKWISGFAVKLEPRRHYP 119
Query: 211 -ASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCR- 268
+E A++ GL R +KV+VE ++ V ++ + ++P LI R+ L
Sbjct: 120 DETEKEAIFRGLRWARGRRVKKVVVESDNRGIVNLVKNGSRTINP---LICQIRDLLSSG 176
Query: 269 NWDCKLQLILREANSCANWLA--AHCENQPLGSLAVFDTPP----YAL 310
+W KL I AN A+ LA A + P L FD+PP YAL
Sbjct: 177 DWKAKLSWIPGNANGVADKLADIAREPDYPPFQLREFDSPPDGVRYAL 224
>gi|449457791|ref|XP_004146631.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
gi|449488498|ref|XP_004158057.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 205
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 26/182 (14%)
Query: 158 ICWMPPPTNWVKLNIEGSSSR--AQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELW 215
+ W P W KLN +GSS G A GG++RD +++LGY++++G + S +EL
Sbjct: 34 VAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKAQFLLGYAESIGRAYSSMAELK 93
Query: 216 ALYHGLNLVWERGFRKVLVECNS---------HEAVKCLELPASFLDPNRALILSCREYL 266
AL GL LV E G++ V VE ++ + VKC+E S+L ++L+L
Sbjct: 94 ALTKGLELVLENGWKDVWVEGDAKGLVEILAENREVKCME-ARSYLRHIKSLLLDFD--- 149
Query: 267 CRNWDCKLQLILREANSCANWLAA---HCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQ 323
+CK+ I RE N A+ A+ C+ + + PP + + D+ G +
Sbjct: 150 ----NCKVSHIYREGNKVADRFASIGHRCKKLEIWR----ELPPLETLDMMRHDAEGKIT 201
Query: 324 TR 325
R
Sbjct: 202 FR 203
>gi|8778657|gb|AAF79665.1|AC022314_6 F9C16.13 [Arabidopsis thaliana]
Length = 1172
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 144 CPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKN 203
C F+K + R+ + +KLN +G+S + AGG++RD G+W+ G+S N
Sbjct: 190 CDNEFDKRGKCRDRMRLIKEAAKELKLNTDGASRGNPALSTAGGVLRDREGEWLGGFSLN 249
Query: 204 LGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCR 263
+G + +ELWAL G L+ S P L+ C
Sbjct: 250 IGRRTAPVAELWALVVGF-----------------------LKTGVSERHPLSFLVRLCH 286
Query: 264 EYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQ 323
+L ++W ++ + REAN A+ LA + P+G + VF + P + P+F D G +
Sbjct: 287 GFLSKDWIVRISHVYREANRLADGLANYAFLLPIG-IHVFVSVPDVVEPLFSDDVIGSAR 345
Query: 324 TR 325
R
Sbjct: 346 LR 347
>gi|124361072|gb|ABN09044.1| Ribonuclease H [Medicago truncatula]
Length = 235
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Query: 136 VNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGK 195
++ ++ A P + +P + W P N V LN++G+ GG++RD +
Sbjct: 46 LHHILKAFAHPTSHSVQQPARIVSWQRPSMNSVALNVDGNVFLDSNLGSFGGLIRDHTSS 105
Query: 196 WILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPN 255
++ G+ L E+ LYHGL L W+ G + V+ +S V ++ +
Sbjct: 106 FLHGFFGKNSRPCILHVEISGLYHGLKLCWDIGIKHVVCHSDSTTVVDLVQKDLNVHHKY 165
Query: 256 RALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQ 315
LI++ ++ L R+W L+ L E N+ A++LA SL + + P +A +
Sbjct: 166 GNLIMAIKKLLRRDWVVSLRHTLCEGNAAADFLAKKGALSD-TSLVILNEAPPDIAFVLL 224
Query: 316 KDSTGIVQTR 325
D+ G+ R
Sbjct: 225 ADAVGVKFVR 234
>gi|388502550|gb|AFK39341.1| unknown [Lotus japonicus]
Length = 229
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLA 211
RPN + W P W+KLN++GS SAG G ++RD SGKWI G++ L
Sbjct: 61 QRPNKEV-WTKPRRGWLKLNVDGSLLPDPLSAGCGDVLRDSSGKWISGFAVKLEPRRHYP 119
Query: 212 --SELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCR- 268
+E A++ GL R +KV+VE ++ V ++ + ++P LI R+ L
Sbjct: 120 DETEKEAIFRGLQWARGRRVKKVVVESDNRGIVNLVKNGSRTINP---LICQIRDLLSSG 176
Query: 269 NWDCKLQLILREANSCANWLA--AHCENQPLGSLAVFDTPP----YAL 310
+W KL I AN A+ LA A + P L FD+PP YAL
Sbjct: 177 DWKAKLSWIPGNANGVADKLADIAREPDYPPFQLREFDSPPDGVRYAL 224
>gi|255546648|ref|XP_002514383.1| nuclease, putative [Ricinus communis]
gi|223546480|gb|EEF47979.1| nuclease, putative [Ricinus communis]
Length = 145
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%)
Query: 169 KLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERG 228
KLN +G S A GGI+RD +G W+ G+ ++G + + +ELWA G++L W +G
Sbjct: 5 KLNTDGISKDYGAKARGGGIIRDSNGCWVGGFVIHIGACDPVGAELWAFLQGISLAWSKG 64
Query: 229 FRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWL 288
++VE +S + + + L+ +C + L WD K++ + RE N A+ L
Sbjct: 65 IHNLIVEVDSSLVADWMNKKSVCKSIHANLVSACLDLLQNWWDVKIKHVFREMNQVADSL 124
Query: 289 A 289
A
Sbjct: 125 A 125
>gi|255567445|ref|XP_002524702.1| nuclease, putative [Ricinus communis]
gi|223536063|gb|EEF37721.1| nuclease, putative [Ricinus communis]
Length = 201
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLA 211
HR + W P W KLN +GS +G GG+ R+ +++LGY++++G S S
Sbjct: 26 HRDPIPVAWEKPQVGWTKLNFDGSCKGREGKGSIGGVFRNHKAEFLLGYAESIGRSTSTI 85
Query: 212 SELWALYHGLNLVWERGFRKVLVECNS---------HEAVKCLELPASFLDPNRALILSC 262
+EL AL GL LV E G+ V +E ++ V+C ++ D N LI+
Sbjct: 86 AELAALRRGLELVLENGWSNVWLEGDAKTLLEIIVKRRKVRCAQMQRHVSDIN--LIIPE 143
Query: 263 REYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIV 322
+ +C + + RE N A+ L A +Q + PP + PI +D+ G +
Sbjct: 144 LD------NCIVSHVYREGNRAADKL-AQIGHQLQKPKIWWHIPPDDVLPIVHEDAEGKI 196
Query: 323 QTRS 326
R
Sbjct: 197 VFRK 200
>gi|2244914|emb|CAB10336.1| splicing factor like protein [Arabidopsis thaliana]
gi|7268306|emb|CAB78600.1| splicing factor like protein [Arabidopsis thaliana]
Length = 559
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 147 GFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT 206
G + + R I W PP WVK++ +G+S G A AGG++RDE G W+ G++ L
Sbjct: 15 GSQSVARVERHIAWTKPPEGWVKVSTDGASRGNPGPAAAGGVIRDEDGLWVGGFALQLAF 74
Query: 207 SNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL 266
+ L W+ +V +E +S V L+ S P L+ C L
Sbjct: 75 --------------VRLRWQSCGGRVELEVDSELVVGFLQSGISEAHPLAFLVRLCHGLL 120
Query: 267 CRNWDCKLQLILREANSCANWLAAHC 292
++W ++ + REAN A+ LA +
Sbjct: 121 SKDWLVRVSHVYREANRLADGLANYA 146
>gi|87241351|gb|ABD33209.1| Ribonuclease H [Medicago truncatula]
Length = 302
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLA 211
H+ I W P WVKLN +G+ AG GG++R G WI G+S+ +G ++L
Sbjct: 194 HKEIVYIDWKRPLDGWVKLNCDGACKGNGELAGCGGLLRQSDGTWIKGFSRKIGACDALH 253
Query: 212 SELWALYHGLNLVWERGFRKVLVECNS 238
+E+W LY GL++ W G ++VE +S
Sbjct: 254 AEMWGLYLGLDMAWREGISHLIVESDS 280
>gi|297804010|ref|XP_002869889.1| At4g21420 [Arabidopsis lyrata subsp. lyrata]
gi|297315725|gb|EFH46148.1| At4g21420 [Arabidopsis lyrata subsp. lyrata]
Length = 201
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLA 211
H+ ++ W P W+KLN +GS R +G A GGI R+ +++LGYS+++G + S
Sbjct: 27 HKQPVKVVWKKPQIGWIKLNFDGSRGR-EGQASIGGIFRNHKAEFLLGYSESIGEATSTM 85
Query: 212 SELWALYHGLNLVWERGFRKVLVECNSHEAVKCL----ELPASFLDPNRALILSCREYLC 267
+E AL GL LV E G+ + +E ++ + + L + + I L
Sbjct: 86 AEFAALKRGLELVLENGWTDIWLEGDAKIIMDIISKRGRLRCERTNKHVNYINVVMPELS 145
Query: 268 RNWDCKLQLILREANSCANWLA--AHCENQPLGSLAVFDT-PPYALAPIFQKDSTGIVQT 324
+C L + RE N A+ LA H P V+ PP + PI D+ G +
Sbjct: 146 ---NCVLSHVYREGNRVADKLAKLGHQFQDP----KVWRVRPPEIVLPIMHDDAKGKIVL 198
Query: 325 RS 326
R+
Sbjct: 199 RT 200
>gi|224138068|ref|XP_002326510.1| predicted protein [Populus trichocarpa]
gi|222833832|gb|EEE72309.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+ W P + +KL+IEGSS G AG+ G++ G +++G++ G L EL AL
Sbjct: 5 LSWQRPEDDVIKLDIEGSSLGNPGRAGSEGLIHHREGLFVVGFTGFAGFGCKLLPELMAL 64
Query: 218 -YHGLNLVWERGFRKVLVECNSHEAVKCLELPASF-LDPNRALILSCREYLCRNWDCKLQ 275
HGL L WERG+R++L + +S +A+ + + ALI+ R+ L R+W KL
Sbjct: 65 KKHGLLLAWERGYRRILCDSDSMDAIWLVTAGIDYEFHKFGALIVDIRDLLKRDWLVKLH 124
>gi|8778674|gb|AAF79682.1|AC022314_23 F9C16.18 [Arabidopsis thaliana]
Length = 196
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 33/168 (19%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+ W P W+KLN +G+S + AGG++RD G+W+ G+S N+G + +ELW +
Sbjct: 56 VGWSVPSEGWLKLNTDGASRGNPTLSTAGGVLRDREGEWLGGFSLNIGRRTAPVAELWGV 115
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLI 277
H P SF L+ C +L ++W ++ +
Sbjct: 116 ------------------SERH--------PLSF------LVRLCHGFLLKDWIVRISHV 143
Query: 278 LREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
REAN A+ LA + P+G + VF + P + P+F D G + R
Sbjct: 144 YREANRLADGLANYAFLLPIG-IHVFVSVPDVVEPLFSDDVIGSARLR 190
>gi|48717057|dbj|BAD23746.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 212
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%)
Query: 159 CWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALY 218
W P W+KLN +GSS A A GG+ RD G ++LGY++ +G + S +EL AL
Sbjct: 50 TWRKPEAGWIKLNFDGSSKHATKIASIGGVYRDHEGAFVLGYAERIGRATSSVAELAALR 109
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCL 245
GL LV G+R+V E +S V +
Sbjct: 110 RGLELVVRNGWRRVWAEGDSKTVVDVV 136
>gi|297725193|ref|NP_001174960.1| Os06g0683500 [Oryza sativa Japonica Group]
gi|52076651|dbj|BAD45551.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255677331|dbj|BAH93688.1| Os06g0683500 [Oryza sativa Japonica Group]
Length = 240
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W P W+KLN +GSS + G A GG+ RD G ++LGY++ +GT+ S +EL AL
Sbjct: 79 WRKPEEGWMKLNFDGSSKHSTGIASIGGVYRDHDGAFLLGYAERIGTATSSVAELAALRR 138
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCL 245
GL L G+R+V E +S V +
Sbjct: 139 GLELAVRNGWRRVWAEGDSKAVVDVV 164
>gi|218191216|gb|EEC73643.1| hypothetical protein OsI_08164 [Oryza sativa Indica Group]
gi|222623285|gb|EEE57417.1| hypothetical protein OsJ_07612 [Oryza sativa Japonica Group]
Length = 204
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W P W+KLN +GSS A A GG+ RD G ++LGY++ +G + S +EL AL
Sbjct: 43 WRKPEAGWIKLNFDGSSKHATKIASIGGVYRDHEGAFVLGYAERIGRATSSVAELAALRR 102
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCL 245
GL LV G+R+V E +S V +
Sbjct: 103 GLELVVRNGWRRVWAEGDSKTVVDVV 128
>gi|255567208|ref|XP_002524585.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223536138|gb|EEF37793.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 127
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 155 NSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASEL 214
S I W PPP +K+N +G+ + AG GG+ R+ G W+ G++ +GT ++L +EL
Sbjct: 5 QSWIAWEPPPLGIIKVNTDGAFRASSSIAGGGGLCRNSQGHWLTGFAFKIGTCSALEAEL 64
Query: 215 WALYHGLNLVWERGFRKVLVECNS 238
W G NL W +GF+KV++E +S
Sbjct: 65 W----GANLAWAKGFKKVILEVDS 84
>gi|222636103|gb|EEE66235.1| hypothetical protein OsJ_22399 [Oryza sativa Japonica Group]
Length = 192
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W P W+KLN +GSS + G A GG+ RD G ++LGY++ +GT+ S +EL AL
Sbjct: 45 WRKPEEGWMKLNFDGSSKHSTGIASIGGVYRDHDGAFLLGYAERIGTATSSVAELAALRR 104
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCL 245
GL L G+R+V E +S V +
Sbjct: 105 GLELAVRNGWRRVWAEGDSKAVVDVV 130
>gi|391224310|emb|CCI61487.1| unnamed protein product [Arabidopsis halleri]
Length = 195
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLA 211
H+ ++ W P W+KLN +GS R +G A GGI R+ +++LGYS+++G + S
Sbjct: 21 HKQPVKVVWKKPEIGWIKLNFDGSRGR-EGQASIGGIFRNHKAEFLLGYSESIGEATSTM 79
Query: 212 SELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFL-DPNRALILSCREYLCRNW 270
+E AL GL LV E G+ + +E ++ + + + + +
Sbjct: 80 AEFAALKRGLELVLENGWTDLWLEGDAKIIMDIISKRGKLRCEKTNKHVNYINVVMPGLS 139
Query: 271 DCKLQLILREANSCANWLA--AHCENQPLGSLAVFDT-PPYALAPIFQKDSTGIVQTRS 326
+C L + RE N A+ LA H P V+ PP + PI D+ G + R+
Sbjct: 140 NCVLSHVYREGNRVADKLAKLGHQFQDP----KVWRVQPPEIVLPIMHDDAKGKIVLRT 194
>gi|218198771|gb|EEC81198.1| hypothetical protein OsI_24213 [Oryza sativa Indica Group]
Length = 206
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W P W KLN +GSS + G A GG+ RD G ++LGY++ +GT+ S +EL AL
Sbjct: 45 WRKPEEGWTKLNFDGSSKHSTGIASIGGVYRDHDGAFLLGYAERIGTATSSVAELAALRR 104
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCL 245
GL L G+R+V E +S V +
Sbjct: 105 GLELAVRNGWRRVWAEGDSKAVVDVV 130
>gi|10092256|gb|AAG12669.1|AC027033_4 hypothetical protein; 81517-79153 [Arabidopsis thaliana]
Length = 256
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 177 SRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVEC 236
SR G R+ G W G+S ++G ++ +ELW +Y+GL + WE+ +V +E
Sbjct: 24 SREGGKVDRLETAREHQGNWCGGFSVSIGICSAPQAELWGVYYGLYIAWEKWVTRVELEV 83
Query: 237 NSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQP 296
+S V L+ P L C ++ ++W ++ + REAN A+ LA + P
Sbjct: 84 DSEIVVGFLKTGIGDSHPLSFLARLCYGFISKDWIVRISHVYREANRLADGLANYAFTLP 143
Query: 297 LGSLAVFDTPPYALAPIFQKDSTG 320
LG F + P + + +D++G
Sbjct: 144 LG-FHFFHSSPDVVDSVRLEDTSG 166
>gi|351723953|ref|NP_001236017.1| uncharacterized protein LOC100526921 [Glycine max]
gi|255631153|gb|ACU15942.1| unknown [Glycine max]
Length = 247
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 160 WMPPPTNWVKLNIEGSSS-RAQGSAGAGGIVRDESGKWILGYSKNLGTSNSL-ASELWAL 217
W P WVKLN++GS SAG GG++RD S KW+ G++K L + ++ +EL A+
Sbjct: 79 WKKPEIGWVKLNVDGSRDPYKSSSAGCGGVLRDASAKWLRGFAKKLNPTYAVHQTELEAI 138
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCR-NWDCKLQL 276
GL + E +K++VE +S V +E P+ ++ R R +W+ +
Sbjct: 139 LTGLKVASEMNVKKLIVESDSDSVVSMVENGVKPNHPDYGVVELIRTKRRRFDWEVRFVS 198
Query: 277 ILREANSCANWLA 289
+ +AN A+ LA
Sbjct: 199 VSNKANRVADRLA 211
>gi|356549425|ref|XP_003543094.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 201
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 23/181 (12%)
Query: 151 IHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSL 210
H+ + W P W KLN +GS G A GG+VR+ + +++LGY++++G +NS
Sbjct: 25 FHKEPIPVAWKKPRIGWTKLNFDGSCKCLSGKASIGGVVRNHNAEFLLGYAESIGQANST 84
Query: 211 ASELWALYHGLNLVWERGFRKVLVECNS---------HEAVKCLELPASFLDPNRALILS 261
+EL AL GL LV E G+ + +E ++ V+C E+ N L
Sbjct: 85 IAELTALRKGLELVLENGWNDIWLEGDAKTLVEIIVKRRKVRCTEVQRHINHINTILPEF 144
Query: 262 CREYLCRNWDCKLQLILREANSCANWLA--AHCENQPLGSLAVFDTPPYALAPIFQKDST 319
++ I RE N A+ A H +QP ++ PP L +D+
Sbjct: 145 NNFFVSH--------IYREGNRAADKFAQMGHHLDQP----RIWRHPPDELLAQLLEDAQ 192
Query: 320 G 320
G
Sbjct: 193 G 193
>gi|357506163|ref|XP_003623370.1| Proteasome subunit alpha type [Medicago truncatula]
gi|355498385|gb|AES79588.1| Proteasome subunit alpha type [Medicago truncatula]
Length = 471
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W+PPP +KLNI+GS G G GG+VR+ G WI G+S+ S++L +EL A++
Sbjct: 72 WIPPPEGTLKLNIDGSFLEDFGCLGIGGVVRNHDGDWITGFSRYEVGSDALLAELRAIHI 131
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCL 245
GL+ ++G+ ++ E + +AV +
Sbjct: 132 GLDFCSKKGYVNIICESDCLKAVDLI 157
>gi|224076743|ref|XP_002304990.1| predicted protein [Populus trichocarpa]
gi|222847954|gb|EEE85501.1| predicted protein [Populus trichocarpa]
Length = 202
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 22/186 (11%)
Query: 151 IHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSL 210
+HR + W P W KLN +GS G A GG+ R+ +++LGY++ +G + S
Sbjct: 26 LHRRPIPVSWKKPQIGWTKLNFDGSCKGTAGKASIGGVFRNHEAEFLLGYAEPIGGTTST 85
Query: 211 ASELWALYHGLNLVWERGFRKVLVECNS---------HEAVKCLELPASFLDPNRALILS 261
+EL AL GL LV E G+ V +E +S + V+C E N LI+
Sbjct: 86 IAELAALRRGLELVLENGWSNVWLEGDSKSLVDIIVKRKQVRCKEAQRQVSHIN--LIMP 143
Query: 262 CREYLCRNWDCKLQLILREANSCANWLA--AHCENQPLGSLAVFDTPPYALAPIFQKDST 319
+ +C + + RE N A+ LA H +P + PP + I +D+
Sbjct: 144 ELQ------NCVVTHVFREGNRAADKLARIGHQLQKPKIWRHI---PPDDILRIVHEDAK 194
Query: 320 GIVQTR 325
G + R
Sbjct: 195 GKIVFR 200
>gi|77556214|gb|ABA99010.1| expressed protein [Oryza sativa Japonica Group]
gi|125579430|gb|EAZ20576.1| hypothetical protein OsJ_36185 [Oryza sativa Japonica Group]
Length = 268
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 8/179 (4%)
Query: 120 IKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRI--CWMPPPTNWVKLNIEGSSS 177
++FK L+KGK V S+ P NS + W+ P W+K+N +GS
Sbjct: 70 LEFKQYPQPDLAKGKHVVSLY---TPKSTRGRSDQNSYVDAQWVKPQGGWMKINTDGSCD 126
Query: 178 RAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LASELWALYHGLNLVWERGFRKVLVEC 236
G+ G G +VRD SG+ +L S+++ S L +EL A GL+L + +++E
Sbjct: 127 SKNGNGGVGAVVRDSSGRVVLALSRHIDRCGSALEAELLACKEGLSLALQYTLLPLVLET 186
Query: 237 NSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLA--AHCE 293
+ EA+K L+ + P +I L N + K R N ++ LA A CE
Sbjct: 187 DCLEALKLLKSKEKVMSPEVFIIREANSLLQGNREIKFSKGQRSQNRVSHLLANKARCE 245
>gi|255565172|ref|XP_002523578.1| conserved hypothetical protein [Ricinus communis]
gi|223537140|gb|EEF38773.1| conserved hypothetical protein [Ricinus communis]
Length = 159
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 18/115 (15%)
Query: 161 MPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHG 220
+PP VK+NI+GS G A AGG++R+ G W+ G++ LG+ + L +E W + G
Sbjct: 25 LPPSLGRVKVNIDGSVKLINGLASAGGLIRNTEGSWLFGFTHKLGSCSPLGAEFWGVLDG 84
Query: 221 LNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREY-LCRNWDCKL 274
L L W++G + + H ++ C +CRE +C +W +L
Sbjct: 85 LRLAWDKGTKAPIAR---HWSITCTH--------------ACREANVCADWSAEL 122
>gi|255542159|ref|XP_002512143.1| conserved hypothetical protein [Ricinus communis]
gi|223548687|gb|EEF50177.1| conserved hypothetical protein [Ricinus communis]
Length = 169
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 29/159 (18%)
Query: 167 WVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWE 226
+VKLN +G+ G A A G YS + + ++L +E W + +GL L WE
Sbjct: 36 FVKLNSDGALDHVTGLAFAEG------------YSHMISSCSALEAECWGVLNGLKLAWE 83
Query: 227 RGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCAN 286
G++ V +EC+S E + + +S + ++L + +REAN CAN
Sbjct: 84 LGYKHVELECDSTEVIAAISGNSSLVGNFQSLAVQ----------------IREANFCAN 127
Query: 287 WLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
WLA NQ LG + V+D PP + + G R
Sbjct: 128 WLAHSAPNQVLG-VTVYDYPPVGIFSLLLAYYLGFGYFR 165
>gi|357117415|ref|XP_003560464.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
[Brachypodium distachyon]
Length = 194
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 146 PGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG 205
P + + S WM P +KLN +GSS SA GG+VRD +G ++LGY++++G
Sbjct: 15 PSAPNLQQRGSACIWMKPKAGRLKLNFDGSSKST--SASIGGVVRDHNGNFVLGYAESIG 72
Query: 206 TSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASF-LDPNRALILSCRE 264
+ S +EL AL L L E G+R + VE + AV + A + I E
Sbjct: 73 KATSSVAELAALRRVLELALENGWRDICVEGDFKTAVDDITSGARVRATKDLEQIKKIAE 132
Query: 265 YLCRNWDCKLQLILREANSCANWLA 289
L R + + R NS A+ A
Sbjct: 133 MLPRIGKASVSHVPRRGNSVADGFA 157
>gi|116830361|gb|ABK28138.1| unknown [Arabidopsis thaliana]
Length = 163
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 15/146 (10%)
Query: 187 GIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLE 246
G +RDE G W ++ NLG + +ELW +Y+GL + WE+G ++ +E +S +
Sbjct: 21 GALRDEYGDWRGSFALNLGRCTAPLAELWGVYYGLVIAWEKGITRLELEVDS-------K 73
Query: 247 LPASFLDPN-------RALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGS 299
L A FL L+ C + ++W ++ + REAN A+ LA + + LG
Sbjct: 74 LVAGFLTTGIEDSHLLSFLVRLCYGFSSKDWIVRVSHVYREANRFADELANYAFSLLLGF 133
Query: 300 LAVFDTPPYALAPIFQKDSTGIVQTR 325
L+ FD+ + I ++D+ G+ R
Sbjct: 134 LS-FDSGLPFVDSIMREDAAGVAGAR 158
>gi|4262184|gb|AAD14501.1| Hypothetical protein [Arabidopsis thaliana]
Length = 158
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 15/146 (10%)
Query: 187 GIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLE 246
G +RDE G W ++ NLG + +ELW +Y+GL + WE+G ++ +E +S +
Sbjct: 17 GALRDEYGDWRGSFALNLGRCTAPLAELWGVYYGLVIAWEKGITRLELEVDS-------K 69
Query: 247 LPASFLDPN-------RALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGS 299
L A FL L+ C + ++W ++ + REAN A+ LA + + LG
Sbjct: 70 LVAGFLTTGIEDSHLLSFLVRLCYGFSSKDWIVRVSHVYREANRFADELANYAFSLLLGF 129
Query: 300 LAVFDTPPYALAPIFQKDSTGIVQTR 325
L+ FD+ + I ++D+ G+ R
Sbjct: 130 LS-FDSGLPFVDSIMREDAAGVAGAR 154
>gi|91805333|gb|ABE65396.1| hypothetical protein At1g26950 [Arabidopsis thaliana]
Length = 162
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 15/146 (10%)
Query: 187 GIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLE 246
G +RDE G W ++ NLG + +ELW +Y+GL + WE+G ++ +E +S +
Sbjct: 21 GALRDEYGDWRGSFALNLGRCTAPLAELWGVYYGLVIAWEKGITRLELEVDS-------K 73
Query: 247 LPASFLDPN-------RALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGS 299
L A FL L+ C + ++W ++ + REAN A+ LA + + LG
Sbjct: 74 LVAGFLTTGIEDSHLLSFLVRLCYGFSSKDWIVRVSHVYREANRFADELANYAFSLLLGF 133
Query: 300 LAVFDTPPYALAPIFQKDSTGIVQTR 325
L+ FD+ + I ++D+ G+ R
Sbjct: 134 LS-FDSGLPFVDSIMREDAAGVAGAR 158
>gi|342365816|gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 673
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W PP K+N + S + S G ++RD +G W G + +++ L EL+A++
Sbjct: 515 WNPPSIGTFKINCDASYFGSGDSVGFACVIRDCNGSWQRGCLGMIESNSILQGELFAIWR 574
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCLELPA-SFLDPNRALILSCREYLCRNWDCKLQLIL 278
G LVW+ G R V+ E + EA + F+DP L+L R+ + NW +LI+
Sbjct: 575 GYLLVWDVGQRDVICETDCVEAFNLVTQDGFRFIDP---LVLKIRDIMHWNWRVDFRLIM 631
Query: 279 REANSCANWLA 289
R+AN+ A+ +A
Sbjct: 632 RDANTVADTMA 642
>gi|84468352|dbj|BAE71259.1| hypothetical protein [Trifolium pratense]
Length = 553
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 8/171 (4%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
I W PP ++VKLN +G+ + Q G GGI+R G+W+ G+++ LG +++ +ELW +
Sbjct: 384 ISWKPPCGSYVKLNTDGAC-KDQNRGGCGGIIRGSQGEWLGGFARGLGNCSAIIAELWGV 442
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLI 277
GL+ GF V + +S V+ ++ L+ R L +W+ K++
Sbjct: 443 AEGLSYARRLGFTAVELNVDSVVVVQAIKTGRFSSSVGLPLVKHIRRMLDLDWEIKIEHA 502
Query: 278 LREANSCANWLA---AHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
RE+N CA+ +A H + + + +D+ P ++ + D GI R
Sbjct: 503 YRESNKCADAMANIGCHLDRETI----FYDSCPISIKELLLADELGITTPR 549
>gi|224116250|ref|XP_002317250.1| predicted protein [Populus trichocarpa]
gi|222860315|gb|EEE97862.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+ W P W KLN +GS + G A GG+ R+ +++LGY++++G + S+ +EL AL
Sbjct: 4 VAWEKPQIGWTKLNFDGSCKDSAGKASIGGVFRNHEAEFLLGYAESIGRTTSMIAELAAL 63
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCL 245
GL LV E G+ V +E +S V +
Sbjct: 64 RRGLELVLENGWGNVWLEGDSKSLVDII 91
>gi|147841916|emb|CAN67514.1| hypothetical protein VITISV_012081 [Vitis vinifera]
Length = 697
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLA 211
H ++ W P W KLN +GS + G A GG++RD + ++LGY++++G + S
Sbjct: 465 HENAIQVAWEKPQIGWTKLNFDGSCKCSSGRASIGGVIRDHNAAFLLGYAESIGHAXSTI 524
Query: 212 SELWALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
+E+ AL GL LV E G+ +V +E + V+ +
Sbjct: 525 AEMAALRRGLELVVENGWSQVWLEGDLQSLVEII 558
>gi|359495727|ref|XP_002267980.2| PREDICTED: putative ribonuclease H protein At1g65750-like [Vitis
vinifera]
Length = 205
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLA 211
H ++ W P W KLN +GS + G A GG++RD + ++LGY++++G + S
Sbjct: 30 HENAIQVAWEKPQIGWTKLNFDGSCKCSTGRASIGGVIRDHNAVFLLGYAESIGHTTSTI 89
Query: 212 SELWALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
+E+ AL GL LV E G+ +V +E + V+ +
Sbjct: 90 AEMAALRRGLELVLENGWSQVWLEGDLQSLVEII 123
>gi|342365825|gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 1613
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W PP K+N + S + S G ++RD +G W G + +++ L EL+A++
Sbjct: 1455 WNPPSIGTFKINCDASYFGSGDSVGFACVIRDCNGSWQRGCLGMIESNSILQGELFAIWR 1514
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCL-ELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
G L W+ G R V+ E + EA + + F+D L+L R+ + NW +LI+
Sbjct: 1515 GYLLAWDVGQRDVICETDCVEAFNLVTQYGFGFID---LLVLKIRDIMHWNWRVDFRLIM 1571
Query: 279 REANSCAN 286
R+AN+ A+
Sbjct: 1572 RDANTVAD 1579
>gi|359807391|ref|NP_001240873.1| uncharacterized protein LOC100812666 [Glycine max]
gi|255636764|gb|ACU18716.1| unknown [Glycine max]
Length = 254
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQ-GSAGAGGIVRDESGKWILGYSKNLGTS---NSLASELW 215
W P + WVKLN++GS + SAG GG++RDE G W +G+ + L + + +EL
Sbjct: 81 WKKPESGWVKLNVDGSRIHEEPASAGCGGVIRDEWGTWCVGFDQKLDPNICRQAHYTELQ 140
Query: 216 ALYHGLNLVWER--GFRKVLVECNSHEAVKCLE--LPASFLDPNRALILSCREYLCR-NW 270
A+ GL + E K++VE +S AV ++ L + P ++ L W
Sbjct: 141 AILTGLKVAREDMINVEKLVVESDSEPAVNMVKSRLGYKYHRPEYKVVQDINRLLKDPKW 200
Query: 271 DCKLQLILREANSCANWLA 289
+L + R+AN AN+LA
Sbjct: 201 LARLDYVPRKANRVANYLA 219
>gi|125542480|gb|EAY88619.1| hypothetical protein OsI_10096 [Oryza sativa Indica Group]
Length = 207
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL--GTSNSLASEL 214
R W P W+KLN +GS + A G+A GG RD G ++ GY++ + G ++S +EL
Sbjct: 44 RTTWRKPEVGWMKLNFDGSRNDATGAASIGGAFRDHEGAFVAGYAERMIVGGASSFTAEL 103
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
AL GL L G+R+V E +S V +
Sbjct: 104 AALRRGLELAARYGWRRVWAEGDSRAVVDVV 134
>gi|115450845|ref|NP_001049023.1| Os03g0158600 [Oryza sativa Japonica Group]
gi|22773232|gb|AAN06838.1| Unknown protein [Oryza sativa Japonica Group]
gi|113547494|dbj|BAF10937.1| Os03g0158600 [Oryza sativa Japonica Group]
gi|125584983|gb|EAZ25647.1| hypothetical protein OsJ_09477 [Oryza sativa Japonica Group]
Length = 210
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL--GTSNSLASEL 214
R W P W+KLN +GS + A G+A GG RD G ++ GY++ + G ++S +EL
Sbjct: 44 RTTWRKPEVGWMKLNFDGSRNDATGAASIGGAFRDHEGAFVAGYAERMIVGGASSFTAEL 103
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
AL GL L G+R+V E +S V +
Sbjct: 104 AALRRGLELAARYGWRRVWAEGDSRAVVDVV 134
>gi|157086546|gb|ABV21218.1| At4g21420 [Arabidopsis thaliana]
Length = 197
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 9/176 (5%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLA 211
H+ ++ W P +KLN +GS R +G A GG+ R+ +++LGYS+++G + S
Sbjct: 27 HKQPVKVVWKKPENGRIKLNFDGSRGR-EGQASIGGVFRNHKAEFLLGYSESIGEATSTM 85
Query: 212 SELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFL-DPNRALILSCREYLCRNW 270
+E AL GL L E G + +E ++ + + + + + +
Sbjct: 86 AEFAALKRGLELALENGLTDLWLEGDAKIIMDIISRRGRLRCEKTNKHVNYIKVVMPELN 145
Query: 271 DCKLQLILREANSCANWLA--AHCENQPLGSLAVFDT-PPYALAPIFQKDSTGIVQ 323
+C L + RE N A+ LA H P V+ PP + PI D+ G Q
Sbjct: 146 NCVLSHVYREGNRVADKLAKLGHQFQDP----KVWRVQPPEIVLPIMHDDAKGCQQ 197
>gi|3080386|emb|CAA18706.1| hypothetical protein [Arabidopsis thaliana]
gi|3402761|emb|CAA20207.1| hypothetical protein [Arabidopsis thaliana]
gi|7268939|emb|CAB81249.1| hypothetical protein [Arabidopsis thaliana]
Length = 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 9/174 (5%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWA 216
++ W P +KLN +GS R +G A GG+ R+ +++LGYS+++G + S +E A
Sbjct: 60 KVVWKKPENGRIKLNFDGSRGR-EGQASIGGVFRNHKAEFLLGYSESIGEATSTMAEFAA 118
Query: 217 LYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFL-DPNRALILSCREYLCRNWDCKLQ 275
L GL L E G + +E ++ + + + + + + +C L
Sbjct: 119 LKRGLELALENGLTDLWLEGDAKIIMDIISRRGRLRCEKTNKHVNYIKVVMPELNNCVLS 178
Query: 276 LILREANSCANWLA--AHCENQPLGSLAVFDT-PPYALAPIFQKDSTGIVQTRS 326
+ RE N A+ LA H P V+ PP + PI D+ G + R+
Sbjct: 179 HVYREGNRVADKLAKLGHQFQDP----KVWRVQPPEIVLPIMHDDAKGKIVLRT 228
>gi|108706282|gb|ABF94077.1| expressed protein [Oryza sativa Japonica Group]
Length = 205
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL--GTSNSLASEL 214
R W P W+KLN +GS + A G+A GG RD G ++ GY++ + G ++S +EL
Sbjct: 39 RTTWRKPEVGWMKLNFDGSRNDATGAASIGGAFRDHEGAFVAGYAERMIVGGASSFTAEL 98
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
AL GL L G+R+V E +S V +
Sbjct: 99 AALRRGLELAARYGWRRVWAEGDSRAVVDVV 129
>gi|255567985|ref|XP_002524970.1| conserved hypothetical protein [Ricinus communis]
gi|223535805|gb|EEF37467.1| conserved hypothetical protein [Ricinus communis]
Length = 132
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%)
Query: 194 GKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLD 253
G WI G+ N+G + + LW LYHGL L W+ G RK+LV+ +S AV +
Sbjct: 4 GMWIHGFVVNIGRCSITGAGLWGLYHGLTLAWKLGIRKLLVKVDSMCAVPLVTGEKDISS 63
Query: 254 PNRALILSCREYLCRNWDCKLQLILREANSCANWLAAHCEN 294
L+ R L +NW + + REAN A+ LA+ ++
Sbjct: 64 SYAPLVSGIRSMLGQNWQVSVSHVYREANFAADGLASFADH 104
>gi|124359723|gb|ABD32401.2| Ribonuclease H [Medicago truncatula]
Length = 233
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASELWALYHGLNLVWERG 228
LN++GS G GG++R+ +G +I G+S + +++ L +EL A++ GL LV +
Sbjct: 78 LNVDGSCIGTPPRTGYGGVLRNSAGLFISGFSGLIPNSADILLAELTAIHQGLKLVTDLN 137
Query: 229 FRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWL 288
+++ +S AV + ALI + ++ L + + L LRE N CA++
Sbjct: 138 VNEIMCYSDSLLAVNLIANDTPRYHIYAALIQNIKD-LLNDRNISLHHTLREGNQCADFF 196
Query: 289 AAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
A N +L V +PP L P+ + D+ GI R+
Sbjct: 197 AKFGANSD-AALVVHQSPPADLLPLLRADALGIYFVRN 233
>gi|124360824|gb|ABN08796.1| Ribonuclease H [Medicago truncatula]
Length = 221
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASE 213
P+ I W PP + VK+N +GSS G ++RD + ++ S N+G + L +E
Sbjct: 47 PHLDIIWKPPIGDIVKINCDGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAE 106
Query: 214 LWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCK 273
A + E V +E +S + V RA +C ++ C + C
Sbjct: 107 FCAGMMAMEKAQEMQLMHVCLETDSLKVVNAFNKGLGVPWQMRARWQNCWDF-CDSISCS 165
Query: 274 LQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
ILRE N A+ LA H + L ++ +PP + + +D G+ TR
Sbjct: 166 CVHILREGNMVADALAKHGQGLSLYYTQLWTSPPPFIYHLLLRDRLGLPYTR 217
>gi|413934579|gb|AFW69130.1| hypothetical protein ZEAMMB73_993395 [Zea mays]
Length = 218
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 8/167 (4%)
Query: 159 CWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALY 218
W P +KLN +GSS A A GG+ RD G ++LGY++ +G + S +EL AL
Sbjct: 54 TWRKPEPGRLKLNFDGSSRHASRRASIGGVYRDHEGGFVLGYAERIGAATSSVAELAALR 113
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLD---PNRALILSCREYLCRNWDCKLQ 275
GL L G+R V VE ++ V + A + L + L D +
Sbjct: 114 RGLELAVANGWRSVWVEGDAMAVVDAVRSRARVRVRAPEDLRLFGEIEKLLLLLDDMSVS 173
Query: 276 LILREANSCANWLA--AHCENQPLGSLAVFDTPPYALAPIFQKDSTG 320
+ R N A+ A H +P D PP + + Q+D+ G
Sbjct: 174 HVRRGGNRVAHGFAKLGHGAARP---RVWRDVPPDEVIRLLQRDAEG 217
>gi|357470735|ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
gi|355506707|gb|AES87849.1| GDSL esterase/lipase [Medicago truncatula]
Length = 1004
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W W+K N +G+S+ S+ GG+ RD++ ++ ++KNLG ++ EL A+
Sbjct: 225 WYNRNQRWIKFNTDGASTAT--SSSCGGVFRDQNANFLSCFAKNLGGGSAYQPELAAIMR 282
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILR 279
+ + ++R +R + +E +S V + + R ++CR+ LCR + + I R
Sbjct: 283 VVEIAYQRNWRNIWIESDSALVVMAFKKMSMIPCRLRNRWINCRKLLCR-MNFVITHIYR 341
Query: 280 EANSCANWLAA 290
E N CA+ LA+
Sbjct: 342 EDNRCADKLAS 352
>gi|255564043|ref|XP_002523020.1| conserved hypothetical protein [Ricinus communis]
gi|223537742|gb|EEF39362.1| conserved hypothetical protein [Ricinus communis]
Length = 147
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 13/125 (10%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
I W PP N KLN +G+ R+ G A + G++R GK ++G+ NLG + L ELW++
Sbjct: 20 IGWSRPPLNGRKLNTDGAVKRSSGCANSRGVLRTSDGKLVVGFMVNLGNCSVLMVELWSV 79
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLC-RNWDCKLQL 276
+GL + ++ R++ +E ++ + + L +S Y C R+W + +
Sbjct: 80 LYGLRMSLQQDIRRIELEVDNKVVIDMI------------LNISQLPYNCNRDWIMRSKN 127
Query: 277 ILREA 281
I RE+
Sbjct: 128 IYRES 132
>gi|92870995|gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
Length = 438
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASELWALYHGLNLVWERG 228
LN++GS G GGI+R+ +G +I G+S + +++ L +EL A++ L++V +
Sbjct: 283 LNVDGSCLGTPSRTGYGGILRNSAGLFISGFSGFIPNSTDILQAELTAIHQSLHMVIDSN 342
Query: 229 FRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL-CRNWDCKLQLILREANSCANW 287
V+ +S AV + LI + ++ L RN L LRE N CA++
Sbjct: 343 MNDVMCYSDSLLAVNLIMNDTPRYHTYAVLIQNIKDLLSVRN--ITLHHTLREGNQCADF 400
Query: 288 LAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
A N + L V +PP L P+ + D+ G V RS
Sbjct: 401 FAKLGANSDV-HLVVHQSPPADLLPLLRADAIGTVFIRS 438
>gi|140053482|gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 869
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 5/169 (2%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASELWALY 218
W N LN++GS + AG GG++R+ G ++ G+ L +S+ L +EL A+Y
Sbjct: 704 WNNSNFNCTILNVDGSCIGSPIRAGFGGLIRNSVGFYLSGFLGFLPSSSDILLAELTAIY 763
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL-CRNWDCKLQLI 277
G+N + G + V +S ++ + +S + ALI R+ L RN+ L
Sbjct: 764 DGINTAIDMGITDMAVYSDSLLSINLITTTSSKFHIHAALIQDIRDKLSLRNFS--LNHT 821
Query: 278 LREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
LRE N A++LA + L + +PP L P+ + D+ G + RS
Sbjct: 822 LREGNQSADYLAKLGAMSDVNVL-IHQSPPDELCPLLKNDAAGTLFLRS 869
>gi|147826851|emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]
Length = 395
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS 212
RP W P WVKLN +GS G AG GG++RD G +I ++ L TSNSL +
Sbjct: 220 RPLRYFSWHRPGAGWVKLNFDGSFKGRTGRAGGGGLLRDAQGSFIAAFATPLDTSNSLMA 279
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLE-LPASFLDPNRALILSCREYLCRNWD 271
E+ AL GL L + ++L+E +S ++ L + ++L+ RE L +
Sbjct: 280 EIGALEGGLRLALKLNVERILIEGDSKITIEMLSGKREXTXEEEKSLMTHIRELLQGFQE 339
Query: 272 CKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
+ REAN A+ L A+ Q + PP++L P D V R
Sbjct: 340 VTARHEFREANRPADHL-ANIATQAHEPMEWHPHPPHSLLPFLHHDQFSRVVPR 392
>gi|7767659|gb|AAF69156.1|AC007915_8 F27F5.12 [Arabidopsis thaliana]
Length = 205
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 185 AGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKC 244
AGG++RD +G W G++ N+G ++ +ELW +Y+GL L WER ++ VE +S V
Sbjct: 75 AGGLIRDATGSWCGGFALNIGVCSAPLAELWGVYYGLYLTWERHITRLEVEVDSELVVGF 134
Query: 245 LELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFD 304
L S P +I+ W + REAN A+ L + PL + +
Sbjct: 135 LSKGISDSHPLSFVIV---------WTSH---VYREANRLADELENYAFTLPL-TFHMLK 181
Query: 305 TPPYALAPIFQKDSTGIVQTR 325
P+ + IFQ D I R
Sbjct: 182 VVPH-VETIFQDDDREIAFLR 201
>gi|53791828|dbj|BAD53894.1| hypothetical protein [Oryza sativa Japonica Group]
gi|53792849|dbj|BAD53882.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125556601|gb|EAZ02207.1| hypothetical protein OsI_24301 [Oryza sativa Indica Group]
gi|125598351|gb|EAZ38131.1| hypothetical protein OsJ_22480 [Oryza sativa Japonica Group]
Length = 217
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 83/189 (43%), Gaps = 26/189 (13%)
Query: 154 PNSRIC---WMPPPTNWVKLNIEGS-SSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS 209
P +RI W PP WVKLN +GS + G A GG++RD+ G+ +L +++ +
Sbjct: 35 PPTRITLVRWTPPRHGWVKLNFDGSVHNDGSGRASIGGVIRDDHGRVLLAFAERTPHATI 94
Query: 210 LASELWALYHGLNLVWERGFR-KVLVECNSHEAVKCL-------ELPASFLDPNRALILS 261
E AL GL L + G+ ++LVE + V+ L +P + LD L+ S
Sbjct: 95 GVVEARALIRGLQLALDHGWNDRLLVEGDDLTLVRLLRCESTHTRIPPAMLDDILWLLDS 154
Query: 262 CREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPI-----FQK 316
R C++Q RE N A+ L E A TP A+ P +
Sbjct: 155 FRV-------CEVQHAYREGNQVADALCH--EAYKAAPAARLWTPGTAMVPFPVWEKLED 205
Query: 317 DSTGIVQTR 325
D G++ R
Sbjct: 206 DRRGVLHQR 214
>gi|15225990|ref|NP_182169.1| RING/U-box family protein [Arabidopsis thaliana]
gi|4559386|gb|AAD23046.1| hypothetical protein [Arabidopsis thaliana]
gi|330255607|gb|AEC10701.1| RING/U-box family protein [Arabidopsis thaliana]
Length = 160
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTSNSLASELWALY 218
W PP W K N +GS +R S AG I+RDESG+++ G + TSN+L SE AL
Sbjct: 3 WTRPPHGWKKCNYDGSYNREMPSK-AGWIIRDESGQFVSAGQATGNHTSNALESEFQALL 61
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
+ W G RK+ E ++ E ++ L S D I + + R +C+ I
Sbjct: 62 ITMQSCWSHGHRKIWFEGDNREVMEILNRRKSRFDIFN-WIRDVQAWKQRFQECRFTWIN 120
Query: 279 REANSCANWLA-AHCENQPLGSLAVFDTPPYALAPIFQKDST 319
R+ N A+ LA +H +D P ++ Q +++
Sbjct: 121 RKQNKPADILAKSHLPQNE--QFKFYDYIPIVISSALQLENS 160
>gi|255552402|ref|XP_002517245.1| conserved hypothetical protein [Ricinus communis]
gi|223543616|gb|EEF45145.1| conserved hypothetical protein [Ricinus communis]
Length = 153
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 169 KLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERG 228
KLN++GS G A AG ++R G W+ G++ LG+ + ++LW + GL L W++G
Sbjct: 43 KLNVDGSVRLQNGLASAGSLIRSAEGSWLSGFTHKLGSCSPFKAKLWGVLDGLRLAWDKG 102
Query: 229 FRKVLVECNSHEAVK 243
F+ V + + EA+K
Sbjct: 103 FKHVDLVIDPSEAIK 117
>gi|15227011|ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|3184275|gb|AAC18922.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|330250513|gb|AEC05607.1| RNase H domain-containing protein [Arabidopsis thaliana]
Length = 365
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL-GYSKNLGTSNSLASELWALY 218
W PPP WVK N + ++ +G +R+ +G +L G +K ++ SL +E
Sbjct: 206 WNPPPEGWVKCNFDSGYTQGSPYTRSGWTIRECNGHIVLCGNAKLQSSTCSLHAEALGFL 265
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLE--LPASFLDPNRALILSCREYLCRNWDCKLQL 276
H L ++W G R V E +S V + S L LI R ++ + C L+
Sbjct: 266 HALQVIWAHGLRYVWFESDSKSLVTLINNGEDHSLLG---TLIYDIRHWMLKLPYCSLEF 322
Query: 277 ILREANSCANWLAAHCENQ-PLGSLAVFDTPPYALA 311
+ RE NS A+ LA+H + PL + TPP L
Sbjct: 323 VNRERNSAADALASHVHARDPL--FQSYTTPPSWLV 356
>gi|15230827|ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thaliana]
gi|9294184|dbj|BAB02086.1| reverse transcriptase-like protein [Arabidopsis thaliana]
gi|332643482|gb|AEE77003.1| Ribonuclease H-like protein [Arabidopsis thaliana]
Length = 343
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 156 SRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG--TSNSLASE 213
+R W PP+ W+K N +G+ + +A AG ++RDE+G + +G + +G TS+SL SE
Sbjct: 182 ARTKWQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVY-MGSGQAIGSTTSDSLESE 240
Query: 214 LWALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
AL + W +G+RKV+ E +S + + +
Sbjct: 241 FQALIIAMQHAWSQGYRKVIFEGDSKQVEELM 272
>gi|255544361|ref|XP_002513242.1| hypothetical protein RCOM_1761740 [Ricinus communis]
gi|223547616|gb|EEF49110.1| hypothetical protein RCOM_1761740 [Ricinus communis]
Length = 213
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+CW PPP +K+N +G S A G A +G ++++ G WI G+ + SL +ELWA
Sbjct: 133 LCWKPPPDGTMKVNTDGERSIASGVASSGDVIKNAQGAWIAGFRHRISCCTSLCAELWAT 192
Query: 218 YHGLNLVWERGFRKV 232
GL + GF+ +
Sbjct: 193 ITGLEMAILMGFKNI 207
>gi|47825035|gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
Length = 1155
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLA 211
H+ R+ W+ PPT + KLN +GS G G GGI+R+ G+ I+ ++ LG S
Sbjct: 984 HKNVIRVNWIKPPTMFAKLNTDGSC--VNGRCGGGGILRNALGQVIMAFTIKLGEGTSSW 1041
Query: 212 SELWALYHGLNLVWERGFRKVLVECNSHEAVKCL----ELPASFLDPNRALILSCREYLC 267
+E ++ HG+ L +RG ++ E +S K + +P P + + E+
Sbjct: 1042 AEAMSMLHGMQLCIQRGVNMIIGETDSILLAKAITENWSIPWRMYIPVKKIQKMVEEHGF 1101
Query: 268 RNWDCKLQLILREANSCANWLAA 290
C LREAN A+ LA+
Sbjct: 1102 IINHC-----LREANQPADKLAS 1119
>gi|147777242|emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
Length = 318
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 75/177 (42%), Gaps = 25/177 (14%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W P W KLN +GS R G+AG GG+ RD +G I Y+ ++ ELWA++
Sbjct: 155 WEKPEFGWTKLNTDGSIDR--GNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWR 212
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRN--W------- 270
GL L G + + VE +S VK + NR S R C N W
Sbjct: 213 GLVLASGLGIKAIWVESDSMSVVKTI---------NRKQPYSSRAGSCLNHIWVLLGKFE 263
Query: 271 DCKLQLILREANSCANWLAAHCENQPLGSLAVFDTP--PYALAPIFQKDSTGIVQTR 325
++ RE N A++L+ GS V T P L I + D+ G + R
Sbjct: 264 KYRVSHTWRETNKAADFLS---RMDLSGSDVVLGTADFPNGLNSIIKDDAEGRMYRR 317
>gi|224136598|ref|XP_002326900.1| predicted protein [Populus trichocarpa]
gi|222835215|gb|EEE73650.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 132 KGKLVNS-MIDADCPPGFEKIHRPNSR----ICWMPPPTNWVKLNIEGSSSRAQGSAGAG 186
K +L NS ++ D P K+H + R + P P + V+LN+ G G AGA
Sbjct: 63 KTELQNSDNLEQDFSP---KLHTKSPRQGELVPRFPSPDDGVRLNVAGVLKGHPGVAGAA 119
Query: 187 GIVRDESGKWILGYSKNLGTSNS-LASELWALYHGL 221
GI+ DESG WI G++ NLG S ++SELW ++ GL
Sbjct: 120 GIISDESGNWIPGFTLNLGKRRSFMSSELWGIFQGL 155
>gi|255567931|ref|XP_002524943.1| conserved hypothetical protein [Ricinus communis]
gi|223535778|gb|EEF37440.1| conserved hypothetical protein [Ricinus communis]
Length = 132
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS 212
R +CW PPP ++ KLN +G+ ++ GG+++D + KW+ S N+G + +
Sbjct: 23 RTPVSLCWNPPPPDFFKLNTDGAVHQSCWHEYVGGLIKDTNDKWVACLSMNIGLCSITFA 82
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
ELW Y GL L G ++VE +S V CL
Sbjct: 83 ELWGGYQGLMLADSLGITNLMVEVDSMTVV-CL 114
>gi|255558334|ref|XP_002520194.1| conserved hypothetical protein [Ricinus communis]
gi|223540686|gb|EEF42249.1| conserved hypothetical protein [Ricinus communis]
Length = 279
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 156 SRIC-WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASEL 214
+R+C W P V LN +G+ + A AGG++RD W+ G+ N+G + L ++L
Sbjct: 154 NRLCLWSLPEEGIVNLNTDGAFVGMESRASAGGVIRDCRAGWLSGFGYNIGKCSPLDAKL 213
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCR 268
W GL++ +G+RK+++E +S A++ ++ RA+ S +E + R
Sbjct: 214 WEALAGLDMASRQGYRKIILEMDSSLALE-------YISSKRAVHGSAKEIVRR 260
>gi|87162701|gb|ABD28496.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 126
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+ W + + LN +GS+ G A GG++R G ++ G ++G SN L +E+ L
Sbjct: 2 VSWQHGDEDTLILNDDGSALNNSGKANYGGLIRKHDGSFLRGLFGSVGISNILHAEIQTL 61
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLI 277
G+ L WE G+RK++ +S V+ + S L+ + YL ++W +Q I
Sbjct: 62 I-GIKLCWETGYRKLMCFFDSIHVVELVMKDISRFHHYANLLELIQNYLDKDWFISIQHI 120
Query: 278 LREANS 283
L + NS
Sbjct: 121 LWDGNS 126
>gi|399920210|gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTS-NSLAS 212
P S W P + +K+N +G+++ G G I+RDE G I+ KN +SL +
Sbjct: 1484 PGSLRRWQAPSSGQLKVNCDGAANFKDRCFGGGTIIRDEFGSLIVAGGKNFQHPVSSLVA 1543
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC 272
EL A+ GL+LV ER R ++VE + EA+ L L P L+ + +
Sbjct: 1544 ELLAIKVGLDLVVERRLRNIMVESDCLEAIHLLNSKERCLAPEGGLVEDIQNTMALVNIS 1603
Query: 273 KLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPI 313
+ + RE N+ A+ +A + + D P + ++ I
Sbjct: 1604 SIYHVRREGNTAAHAIAKFVARNNGRYVWLEDGPDWLMSLI 1644
>gi|222622434|gb|EEE56566.1| hypothetical protein OsJ_05904 [Oryza sativa Japonica Group]
Length = 420
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 139 MIDADCPPGFEKIHRPNSRIC---WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGK 195
MI C PG + RP RI W+PPP +N + + +A+ G G ++RD+ G
Sbjct: 240 MIMQHCGPG--NVSRPAERISLPSWVPPPAGVFLINTDAAVFQAERQMGVGVVIRDQHGN 297
Query: 196 WILGY-SKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPA 249
+L ++ +G ++ +E A+ H L L E GF V+V C+ ++ L P
Sbjct: 298 CLLAANTRFMGITDPETAEACAIRHALWLAKEEGFHNVIVACDCLSVIQKLNSPG 352
>gi|225459048|ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
Length = 431
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W P W KLN +GS R G+AG GG+ RD +G I Y+ ++ ELWA++
Sbjct: 268 WEKPEFGWTKLNTDGSIDR--GNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWR 325
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCL 245
GL L G + + VE +S AVK +
Sbjct: 326 GLVLASGLGIKAIWVESDSMSAVKTI 351
>gi|218190504|gb|EEC72931.1| hypothetical protein OsI_06781 [Oryza sativa Indica Group]
Length = 318
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 120 IKFKISSARPLSKGKLVNSM-IDADCPPGFEKIHR-PNSRICWMPPPTNWVKLNIEGSSS 177
+ K S + + KGK V S+ + HR PN + W+ P W+KLN++GS
Sbjct: 115 FQIKESPLKDVEKGKSVASLSVTGRVRDRASDDHRVPNPVLHWVKPQVGWMKLNVDGSFD 174
Query: 178 RAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWALYHGLNLVWERGFRKVLVEC 236
A G G ++RD SG I K L + +L SEL A GLNLV +LVE
Sbjct: 175 AALCKGGIGMVLRDSSGNTIFASCKPLNRCTGALESELRACVEGLNLVLHWTLLPILVET 234
Query: 237 NSHEAVKCL 245
+ V+ L
Sbjct: 235 DCMSVVQLL 243
>gi|297725595|ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group]
gi|255677700|dbj|BAH93889.1| Os07g0417700 [Oryza sativa Japonica Group]
Length = 1011
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Query: 130 LSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIV 189
L+KGK V M D K R S + W P T W+K+N++GS Q S G G ++
Sbjct: 577 LTKGKQVVYMYPRDREKS--KRQRVASDLLWSCPETGWMKVNVDGSFDAQQESGGIGVVM 634
Query: 190 RDESGKWILGYSKNL-GTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELP 248
R+ G+ I K+L G ++L +EL A G+ L + +E + A++ ++
Sbjct: 635 RNSEGRVIFAAFKSLNGCKSALEAELEACREGIVLASQWTMCPFYIESDCQVALQMIQGK 694
Query: 249 ASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLA--AHCENQPLGSLAVF 303
LI N + +L+ I R NS +++LA CE+ G + +F
Sbjct: 695 EEERSELAYLIREIVSAAFGNREIRLRKIHRSQNSVSHYLANKGRCESLSKGFVLLF 751
>gi|255554272|ref|XP_002518176.1| hypothetical protein RCOM_1023580 [Ricinus communis]
gi|223542772|gb|EEF44309.1| hypothetical protein RCOM_1023580 [Ricinus communis]
Length = 125
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 212 SELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWD 271
+E LY LNL W GFR + VE +S AV + A R L + + R+W
Sbjct: 17 AETLGLYSDLNLAWSLGFRGIQVEMDSSTAVDSVSTKAV-----RGLPAAVGILVKRDWC 71
Query: 272 CKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
+++ I REAN+CA LA + +G +FD P ++ + DSTGIV R
Sbjct: 72 IRVKHIFREANACAVGLATLAFDSNVGFQTLFDPLP-VISHLLLGDSTGIVFPR 124
>gi|255572864|ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
gi|223533283|gb|EEF35036.1| conserved hypothetical protein [Ricinus communis]
Length = 437
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W P W+KLN +GS R AG GG++RD G I + + ELWA++
Sbjct: 274 WKKPDVGWIKLNTDGSVDRQH--AGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWR 331
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCLELPASF-------LDPNRALILSCREYLCRNWDC 272
GL L G + + VE +S AVK + S L+ AL+ EY
Sbjct: 332 GLVLALGLGIKVIWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKFEEY------- 384
Query: 273 KLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
K+ RE N A++L+ + L P L I + D+ G + R
Sbjct: 385 KVSHAWRETNKAADYLSKMVLERNDVVLWPVHFPT-TLQNIIKDDAQGRIYCR 436
>gi|218199673|gb|EEC82100.1| hypothetical protein OsI_26115 [Oryza sativa Indica Group]
Length = 237
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 130 LSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIV 189
+KGK V S + C G ++ P W P W+KLN++GS GS G G I+
Sbjct: 50 FAKGKFVVS--NLGCMKGTSQVPDPKVLNHWEKPNPGWMKLNVDGSFDARYGSGGIGAIL 107
Query: 190 RDESGKWILGYSKNLGT-SNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELP 248
R+ +G I + N+ +L +EL A G+ + + +VE +S E +K +
Sbjct: 108 RNSAGSLI--FCGNMSRCGGALEAELLACREGIIMALQWTLLPFIVETDSLELLKLVGAG 165
Query: 249 ASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLA 289
+S L+ R+ L N + ++ I RE N +++LA
Sbjct: 166 SSDRSELEFLVKEVRDLLSGNREIIIRKIHRENNCVSDFLA 206
>gi|77551963|gb|ABA94760.1| Protein kinase domain containing protein, expressed [Oryza sativa
Japonica Group]
Length = 716
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 130 LSKGKLV--NSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGG 187
L KGK V S+I A G + ++R+ W P W+KLN++GS +G G G
Sbjct: 295 LEKGKTVVSRSVISALRRRGPDGPPTASTRLHWEKPRLGWMKLNVDGSFDADRGKGGIGM 354
Query: 188 IVRDESGKWILGYSKNLGT-SNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLE 246
I+RD SG + K+L + N+L +E+ A GL L + R +L+E + C+
Sbjct: 355 ILRDNSGSTVFAACKSLDSCKNALEAEIRACMEGLILALQWTMRPILIETD------CVS 408
Query: 247 LPASFLDPNRAL 258
L + NR L
Sbjct: 409 LVNLLKEGNRDL 420
>gi|124360120|gb|ABN08136.1| Ribonuclease H [Medicago truncatula]
Length = 97
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 176 SSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVE 235
+S+ +G AG GG++R +SG+ I G+SK LG ++ +ELW ++ L GF V +
Sbjct: 4 ASKGEGIAGCGGVLRGDSGECICGFSKGLGAYSAYVAELWGVFEDLKFALSHGFLTVELH 63
Query: 236 CNSHEAVKCLELPASFLDPNRALILSCREYL 266
+S V + L LI + R +L
Sbjct: 64 VDSQVVVNTISFAKGGLPIRWTLIQNIRRFL 94
>gi|125557660|gb|EAZ03196.1| hypothetical protein OsI_25347 [Oryza sativa Indica Group]
Length = 858
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWALY 218
W P T W+KLN++GS GS G G I+R+ +G+ + ++ +L +EL A
Sbjct: 701 WKKPDTGWMKLNVDGSFQEHDGSGGIGAILRNSAGEVVFASCGSMNRCGGALEAELLACR 760
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
GL LV + +++E + +A++ ++ LI + + N D + I
Sbjct: 761 DGLTLVLQWTLLPIVIESDCLQAIQLIQSKEEERSDLAFLIREIKHLMAGNRDIVIMKIH 820
Query: 279 REANSCANWLAAHCENQPLGSLAVFDT 305
R NS ++ LA ++ L + + DT
Sbjct: 821 RNQNSVSHALAYKGCSEALTAFWLDDT 847
>gi|332322110|emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W P WVKLN +G+S G AG GG++R G+ ++ N G+ +EL A+
Sbjct: 1209 WQCPKEGWVKLNTDGASKGNPGPAGGGGLIRGPRGEIHEVFAINCGSCTCTKAELLAVLR 1268
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRN-WDCKLQLIL 278
GL + WE ++V+V +S K L A P +I C + R W ++
Sbjct: 1269 GLMIAWEGNHKQVIVSVDSELVAKLLISNAPPSSPYIHIINRCLSLIARKEWKIVIEHCY 1328
Query: 279 REANSCANWLA--AHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
RE N A+ LA C + + + + P L I +D +G+ TR
Sbjct: 1329 RETNRAADRLANMGVC---AVERVVMIEAIPKDLHAILLEDLSGVAWTR 1374
>gi|255580423|ref|XP_002531038.1| hypothetical protein RCOM_0755060 [Ricinus communis]
gi|223529391|gb|EEF31355.1| hypothetical protein RCOM_0755060 [Ricinus communis]
Length = 216
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASE 213
P+ I W PPP W+KLN++G G AGA G++RD +G WI G+ + +G L +E
Sbjct: 158 PSKNISWNPPPVGWIKLNVDGGVK--DGKAGATGLIRDSNGNWISGFVQFIGDCPVLEAE 215
Query: 214 L 214
L
Sbjct: 216 L 216
>gi|357117413|ref|XP_003560463.1| PREDICTED: uncharacterized protein LOC100830266 [Brachypodium
distachyon]
Length = 228
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 160 WMPPPTNWVKLNIEGSSSR--AQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWA 216
W P +KLN +GSS + + SA GG+VRD G+++LGY++ +G S S +EL A
Sbjct: 47 WRKPEAGRLKLNFDGSSRQHVSSRSASIGGVVRDHEGRFVLGYAERIGKGSTSSVAELAA 106
Query: 217 LYHGLNLVWERGF--RKVLVECNSHEAV 242
L GL L E G+ R + VE ++ AV
Sbjct: 107 LKRGLELALEHGWRGRALWVEGDAMAAV 134
>gi|357487029|ref|XP_003613802.1| S-like ribonuclease [Medicago truncatula]
gi|355515137|gb|AES96760.1| S-like ribonuclease [Medicago truncatula]
Length = 552
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 168 VKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASELWALYHGLNLVWE 226
V LN++GS + AG G++R+ +G ++ G+S + +S+ EL+A+YHGL L E
Sbjct: 395 VILNVDGSCLGSPSRAGYDGLLRNHAGYYLSGFSGYIHNSSDIFYVELFAIYHGLLLAKE 454
Query: 227 RGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCAN 286
+ ++ +S + ++ PA LI +E L + + + LRE N AN
Sbjct: 455 KNVVDLVCYSDSMHCINLIKGPAMKFHNYVVLIQDIKE-LFDHVNVTIYHTLREENQYAN 513
Query: 287 WLAAHCENQPLGSLAVF---DTPPYALAPIFQKDSTGIVQTR 325
+LA S VF +PP L + + D+ G + R
Sbjct: 514 FLAK----LKASSDIVFCHHASPPEGLQSLLKIDAAGTIFPR 551
>gi|242093954|ref|XP_002437467.1| hypothetical protein SORBIDRAFT_10g027630 [Sorghum bicolor]
gi|241915690|gb|EER88834.1| hypothetical protein SORBIDRAFT_10g027630 [Sorghum bicolor]
Length = 221
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 13/172 (7%)
Query: 159 CWMPPPTNWVKLNIEGSSSRAQGS-----AGAGGIVRDESGKWILGYSKNLGTSNSLASE 213
W P +KLN +GSS S A GG+ RD G ++LGY++ +G + S +E
Sbjct: 52 TWRKPEPGRLKLNFDGSSRHGGASSSRRRASIGGVYRDHEGGFVLGYAERIGAATSSVAE 111
Query: 214 LWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCRE---YLCRNW 270
L AL GL L G+R V +E ++ V + A + + C E L
Sbjct: 112 LAALRRGLELAVANGWRSVWIEGDAKTVVDVVRSRARVRVRSPEDLRLCGEIEKLLPLLD 171
Query: 271 DCKLQLILREANSCANWLA--AHCENQPLGSLAVFDTPPYALAPIFQKDSTG 320
D + + R+ N A+ A H +P D PP + Q+D+ G
Sbjct: 172 DMSVSHVRRQGNRVAHGFAKLGHGAARP---RVWRDVPPDEVLRFLQRDAEG 220
>gi|253761765|ref|XP_002489257.1| hypothetical protein SORBIDRAFT_0011s003210 [Sorghum bicolor]
gi|241947006|gb|EES20151.1| hypothetical protein SORBIDRAFT_0011s003210 [Sorghum bicolor]
Length = 821
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 137 NSMIDADCPPGFEKIHRPN-SRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGK 195
+++I+ D P + RP ++ W P W K+N + R S AG ++R+E+G
Sbjct: 637 STLIEEDLAP----VMRPAPAKAKWEKPSPGWFKINTDAGFDRESNSGSAGVVIRNEAGL 692
Query: 196 WILGYSKNL-GTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDP 254
G ++ + ++L +E A GL LV E G +V++E V C EL L
Sbjct: 693 VAGGSARWIENVPDTLTAEAMAAREGLELVVELGLDRVILE------VDCQELSKLLLSQ 746
Query: 255 NRALILSCREYLCRNW--------DCKLQLILREANSCANWLAA 290
N I SC E LC + + ++ + R+ANS AN+ A+
Sbjct: 747 NS--ISSCIEGLCFDIIELGKMFSEFCIRWVRRDANSVANFCAS 788
>gi|357121083|ref|XP_003562251.1| PREDICTED: uncharacterized protein LOC100845261 [Brachypodium
distachyon]
Length = 574
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 20/188 (10%)
Query: 130 LSKGKLVNSMIDADCPPGFEKIHRPNSR------ICWMPPPTNWVKLNIEGSSSRAQGSA 183
LSKGK + GF + + R + W PP W KLN +GS A G
Sbjct: 391 LSKGKEL---------AGFSSFQKSSIRCSASVDVPWQAPPEGWTKLNFDGSFLAATGKG 441
Query: 184 GAGGIVRDESGKWILGYSKNLGT-SNSLASELWALYHGLNLVWERGFRKVLVECNSHEAV 242
GAG I++D +G + + L + ++ +EL A GL + +R + VE + E +
Sbjct: 442 GAGMILKDSTGATLFTAVRYLPSCGDAFEAELAACMEGLAIAVQRTELPIQVETDCAELI 501
Query: 243 KCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQP----LG 298
++ R+L+ + L + KL I R NS ++ LA +Q LG
Sbjct: 502 VQVQAQEQNRSRYRSLVKEVQRLLASQREIKLSKIQRSQNSVSHDLAYAWSSQRTLCWLG 561
Query: 299 SLAVFDTP 306
S + D P
Sbjct: 562 SNPLEDAP 569
>gi|255582323|ref|XP_002531952.1| conserved hypothetical protein [Ricinus communis]
gi|223528398|gb|EEF30434.1| conserved hypothetical protein [Ricinus communis]
Length = 191
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 68/164 (41%), Gaps = 42/164 (25%)
Query: 162 PPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGL 221
PP W KL +GS G A AGG++RD G W G++ N+
Sbjct: 66 PPAWPWYKLITDGSFMARTGLATAGGLLRDSCGNWQWGFAMNI----------------- 108
Query: 222 NLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREA 281
EAV LP+ + +L + + +L ++W ++ + REA
Sbjct: 109 ----------------EDEAV----LPSV----HSSLAVGIKNFLWKDWQVRITHMYREA 144
Query: 282 NSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
N A +LA LG L VFD PP + I +DS G+ +R
Sbjct: 145 NFSAYFLAKKAAALHLG-LHVFDKPPEDIKDIPFQDSCGVSFSR 187
>gi|242056489|ref|XP_002457390.1| hypothetical protein SORBIDRAFT_03g006560 [Sorghum bicolor]
gi|241929365|gb|EES02510.1| hypothetical protein SORBIDRAFT_03g006560 [Sorghum bicolor]
Length = 624
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 6/177 (3%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LA 211
+P W PP + +KLN + S G+ G ++RD G+ ++ + + S
Sbjct: 11 QPRQLSHWTKPPGDVLKLNCDASFIAETGTGSWGVLIRDCGGEIVMSGRGRINHALSPFH 70
Query: 212 SELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNW- 270
+EL A GL L + G ++LVE ++ E V+ + L L LI + C N+
Sbjct: 71 AELIACLQGLQLAVDLGIGRILVETDAQEVVRAIRLDDYHLSSVGYLIDEIKSLACSNFI 130
Query: 271 DCKLQLILREANSCANWLAA--HCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
+ + R+ N A+ LAA H N+ G V ++ P A++ I D G + R
Sbjct: 131 SFEFAYVSRDCNRAAHELAALGHLCNE--GEELVTNSVPEAVSVIVANDLLGNEKAR 185
>gi|255579509|ref|XP_002530597.1| nuclease, putative [Ricinus communis]
gi|223529845|gb|EEF31777.1| nuclease, putative [Ricinus communis]
Length = 113
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 181 GSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHE 240
GSAG GG+ R+E G WI GY ++G ++ +ELWA GL + RG++++++E +S
Sbjct: 9 GSAGGGGLFRNEFGDWIGGYVVHIGYCTAIEAELWAALQGLLIARRRGYQRLVLEVDSQL 68
Query: 241 AVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREAN 282
V + L+ +CR ++Q + +E N
Sbjct: 69 LVAWPTSLSVLEGKCANLVQTCRGLEHEFSSFQVQHVFQEGN 110
>gi|62733464|gb|AAX95581.1| hypothetical protein, partial, partial [Oryza sativa Japonica
Group]
Length = 364
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 16/185 (8%)
Query: 102 KQGQKSNSSDLFTGRSEKIKFKISSA--RPLSKGKLVNSMIDADCPPGFEKIHRPNSRIC 159
K + +S F + F+I A L KGK V + P + ++ N + C
Sbjct: 145 KSAPPTETSQRFIQSYVDLLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRVLN--NHQPC 202
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LASELWALY 218
W P W+KLN++GS + G G G I+R+ +G I K L N+ L SEL A
Sbjct: 203 WERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLESELRACV 262
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLE-------LPASFLDPNRALILSCR----EYLC 267
GL L + VE + V+ L+ + A+ + R L++ R + +C
Sbjct: 263 EGLKLAIHWTLLPIQVETDCASVVQLLQGTGRDFSVLANIIHEARHLLVGERVISIKKIC 322
Query: 268 RNWDC 272
R+ +C
Sbjct: 323 RSQNC 327
>gi|357502803|ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
gi|355496705|gb|AES77908.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
Length = 666
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASE 213
P+ I W PP + VK+N +GSS G ++RD + ++ S N+G + L +E
Sbjct: 210 PHLDIIWKPPIGDIVKINCDGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAE 269
Query: 214 LWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCK 273
A + E V +E +S + V RA +C ++ C + C
Sbjct: 270 FCAGMMAMEKAQEMQLMHVCLETDSLKVVNAFNKGLGVPWQMRARWQNCWDF-CDSISCS 328
Query: 274 LQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDS 318
ILRE N A+ LA H + L ++ +PP + + +DS
Sbjct: 329 CVHILREGNMVADALAKHGQGLSLYYTQLWTSPPPFIYHLLLRDS 373
>gi|218186460|gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indica Group]
Length = 1765
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 19/208 (9%)
Query: 102 KQGQKSNSSDLFTGRSEKIKFKISSA--RPLSKGKLVNSMIDADCPPGFEKIHRPNSRIC 159
K + +S F + F+I A L KGK V + P + ++ N + C
Sbjct: 1546 KSAPPTETSQRFIQSYVDLLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRVLN--NHQPC 1603
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWALY 218
W P W+KLN++GS + G G G I+R+ +G I K L +N L SEL A
Sbjct: 1604 WERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLESELRACV 1663
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLE-------LPASFLDPNRALILSCR----EYLC 267
GL L + VE + V+ L+ + A+ + R L++ R + +C
Sbjct: 1664 EGLKLAIHWTLLPIQVETDCASVVQLLQGIGRDFSVLANIIHEARHLLVGERVISIKKIC 1723
Query: 268 RNWDCKLQLILREANS---CANWLAAHC 292
R+ +C + A + WL C
Sbjct: 1724 RSQNCISHHLANTARADFLAGFWLGESC 1751
>gi|357499649|ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]
gi|355495128|gb|AES76331.1| Resistance protein PRG [Medicago truncatula]
Length = 1256
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LASELWA 216
I W + + LN++GS AG GGI+R+ +G ++ +S + S L +EL A
Sbjct: 1089 IKWNNSNQSCIILNVDGSCLGTPIRAGFGGIIRNNAGLFLKAFSGFIQDSTCILHAELTA 1148
Query: 217 LYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQL 276
++HGL L G ++ +S A+ + LI +E L N + +
Sbjct: 1149 IFHGLTLAASMGIEELACFSDSQIAISLITAAIPRFHAYAVLIQDIKEILASN-NFTILH 1207
Query: 277 ILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
LRE N CA+++A + PP+ L + D+ G R+
Sbjct: 1208 TLREGNHCADFMAKLGASST-EEFTEHHNPPHDLIVKIKDDAVGTCFLRT 1256
>gi|62733432|gb|AAX95549.1| hypothetical protein [Oryza sativa Japonica Group]
gi|110288744|gb|AAP52527.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 472
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 16/185 (8%)
Query: 102 KQGQKSNSSDLFTGRSEKIKFKISSA--RPLSKGKLVNSMIDADCPPGFEKIHRPNSRIC 159
K + +S F + F+I A L KGK V + P + ++ N + C
Sbjct: 253 KSAPPTETSQRFIQSYVDLLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRVLN--NHQPC 310
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LASELWALY 218
W P W+KLN++GS + G G G I+R+ +G I K L N+ L SEL A
Sbjct: 311 WERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLESELRACV 370
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLE-------LPASFLDPNRALILSCR----EYLC 267
GL L + VE + V+ L+ + A+ + R L++ R + +C
Sbjct: 371 EGLKLAIHWTLLPIQVETDCASVVQLLQGTGRDFSVLANIIHEARHLLVGERVISIKKIC 430
Query: 268 RNWDC 272
R+ +C
Sbjct: 431 RSQNC 435
>gi|218190326|gb|EEC72753.1| hypothetical protein OsI_06384 [Oryza sativa Indica Group]
Length = 556
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 139 MIDADCPPGFEKIHRPNSRIC---WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGK 195
MI PG + RP RI W+PPP +N + + +A+ G G ++RD+ G
Sbjct: 376 MIMQHYGPG--NVSRPAERISLPSWVPPPAGVFLINTDAAVFQAERQMGVGVVIRDQHGN 433
Query: 196 WILGY-SKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELP 248
+L ++ +G ++ +E A+ H L L E GF V+V C+ ++ L P
Sbjct: 434 CLLAANTRFMGITDPETAEACAIRHALWLAKEEGFHNVIVACDCLSVIQKLNSP 487
>gi|13786450|gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza sativa Japonica Group]
gi|31433076|gb|AAP54636.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 791
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 16/185 (8%)
Query: 102 KQGQKSNSSDLFTGRSEKIKFKISSA--RPLSKGKLVNSMIDADCPPGFEKIHRPNSRIC 159
K + +S F + F+I A L KGK V + P + ++ N + C
Sbjct: 572 KSAPPTETSQRFIQSYVDLLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRVLN--NHQPC 629
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LASELWALY 218
W P W+KLN++GS + G G G I+R+ +G I K L N+ L SEL A
Sbjct: 630 WERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLESELRACV 689
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLE-------LPASFLDPNRALILSCR----EYLC 267
GL L + VE + V+ L+ + A+ + R L++ R + +C
Sbjct: 690 EGLKLAIHWTLLPIQVETDCASVVQLLQGTGRDFSVLANIIHEARHLLVGERVISIKKIC 749
Query: 268 RNWDC 272
R+ +C
Sbjct: 750 RSQNC 754
>gi|356495411|ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
Length = 943
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 182 SAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVL-VECNSHE 240
+A GGI+ D G W +G+ + G + SL +EL A+ HGLNL W++GFR + E + +
Sbjct: 133 NARFGGIIHDSFGNWHVGFYGSCGMAMSLEAELLAILHGLNLSWDKGFRNIQWFEMEAKD 192
Query: 241 AVK----CLELPASFLD 253
VK E P S L+
Sbjct: 193 KVKNEDSAAESPTSVLE 209
>gi|297612697|ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group]
gi|108862221|gb|ABA96496.2| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|255670064|dbj|BAF29216.2| Os12g0156200 [Oryza sativa Japonica Group]
Length = 1764
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Query: 102 KQGQKSNSSDLFTGRSEKIKFKISSA--RPLSKGKLVNSMIDADCPPGFEKIHRPNSRIC 159
K + +S F + F+I A L KGK V + P + ++ N + C
Sbjct: 1293 KSAPPTETSQRFIQSYVDLLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRVLN--NHQPC 1350
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWALY 218
W P W+KLN++GS + G G G I+R+ +G I K L +N L SEL A
Sbjct: 1351 WERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLESELRACV 1410
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLE 246
GL L + VE + V+ L+
Sbjct: 1411 EGLKLAIHWTLLPIQVETDCASVVQLLQ 1438
>gi|357518747|ref|XP_003629662.1| Chalcone synthase [Medicago truncatula]
gi|355523684|gb|AET04138.1| Chalcone synthase [Medicago truncatula]
Length = 477
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 155 NSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASEL 214
S I W P V LN +GS + G+AG G N+GT + + SEL
Sbjct: 13 QSTISWSCPDEGTVALNSDGSVAGPLGTAGCGA---------------NIGTCSVVQSEL 57
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
W + HGL + RGFR V V+ +S EA+ +
Sbjct: 58 WGILHGLQVAKSRGFRHVRVDSDSAEAINLI 88
>gi|125561762|gb|EAZ07210.1| hypothetical protein OsI_29454 [Oryza sativa Indica Group]
Length = 201
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LAS 212
P ++ W PP W+K N++GS G G ++RD G I K++ +S L +
Sbjct: 40 PACKMRWERPPEGWMKANVDGSFDSQLLKGGIGVVIRDWEGAIIFASCKSVCRCSSPLEA 99
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC 272
EL AL G+ L R V++E + A++ ++ L+ R+ L + +
Sbjct: 100 ELLALREGIYLFLIWTLRSVILETDCLVALQMIQSKERATSELAYLVREIRDLLNGSREF 159
Query: 273 KLQLILREANSCANWLAAHCENQPLGS 299
L I RE N +++LA C + L S
Sbjct: 160 VLWKIRREQNMVSHFLANKCRCEDLSS 186
>gi|218190707|gb|EEC73134.1| hypothetical protein OsI_07152 [Oryza sativa Indica Group]
Length = 647
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSN-SLASELWALY 218
W P W+KLNI+GS G G G ++R+ G+ I +G N +L SEL A
Sbjct: 476 WSRPKPGWMKLNIDGSYGPQDGRGGIGAVLRESFGRVIFSACGFIGRCNGALESELIACR 535
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
GLNL + + VE + E ++ L L ++ R + + +
Sbjct: 536 DGLNLALQWTLLPIAVESDCLEIIQLLNSKEKLLSAEGFIVREIRFLMTGTKEVSFAKVH 595
Query: 279 REANSCANWLA--AHCEN 294
R N +++LA CE+
Sbjct: 596 RNQNRVSHFLANKGRCES 613
>gi|255549924|ref|XP_002516013.1| hypothetical protein RCOM_1493360 [Ricinus communis]
gi|223544918|gb|EEF46433.1| hypothetical protein RCOM_1493360 [Ricinus communis]
Length = 293
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 26/113 (23%)
Query: 137 NSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKW 196
N +IDAD + N I W P W+KLN++G G AGAGG++RD +G
Sbjct: 163 NVLIDADNNDLY------NENIFWHPSSVGWIKLNVDGDVK--DGKAGAGGLIRDFNG-- 212
Query: 197 ILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPA 249
+L LW ++ W+ G+R+VLVE ++ E V L A
Sbjct: 213 -----------GALEYPLWP-----SVPWDLGYRRVLVESDAKEVVDMLTTSA 249
>gi|27413501|gb|AAO11668.1| hypothetical protein [Arabidopsis thaliana]
Length = 221
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG--TSNSL 210
R ++ W PP W+K N +GS + +G ++RD+ G + G ++ +G +N+L
Sbjct: 56 RESTHQKWEQPPMGWIKCNYDGSFTYRTQQTNSGWLIRDDKG-FYKGAAQAVGGTMNNAL 114
Query: 211 ASELWALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
SEL AL + W +G+RKV+ E +S + + L
Sbjct: 115 ESELQALVMAMQHTWSQGYRKVIFEGDSKQVEELL 149
>gi|255577641|ref|XP_002529697.1| conserved hypothetical protein [Ricinus communis]
gi|223530799|gb|EEF32663.1| conserved hypothetical protein [Ricinus communis]
Length = 131
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNSLASELWALY 218
W PP K+N E S+ ++ S G G I+RD+ G+ ++ K++ + +E A
Sbjct: 15 WCPPALGIYKINAETSALKSLKSTGLGVIIRDQIGQVMMSAHKHIEYMHDPEVAEALATL 74
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLE 246
+GL++ W+ GF ++EC+S+ ++ L+
Sbjct: 75 YGLSIAWDCGFYDAVLECDSYMVIQSLQ 102
>gi|33465891|gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]
Length = 2367
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Query: 102 KQGQKSNSSDLFTGRSEKIKFKISSA--RPLSKGKLVNSMIDADCPPGFEKIHRPNSRIC 159
K + +S F + F+I A L KGK V + P + ++ N + C
Sbjct: 1896 KSAPPTETSQRFIQSYVDLLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRVLN--NHQPC 1953
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWALY 218
W P W+KLN++GS + G G G I+R+ +G I K L +N L SEL A
Sbjct: 1954 WERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLESELRACV 2013
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLE 246
GL L + VE + V+ L+
Sbjct: 2014 EGLKLAIHWTLLPIQVETDCASVVQLLQ 2041
>gi|222631198|gb|EEE63330.1| hypothetical protein OsJ_18141 [Oryza sativa Japonica Group]
Length = 220
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 76/189 (40%), Gaps = 18/189 (9%)
Query: 146 PGFEKIHRPNSRICWMPPPTNWVKLNIEGSS-SRAQGSAGAGGIVRDESGKWILGYSKNL 204
P H RI W PPP W KLN +GS + A GG++R G +L +++
Sbjct: 35 PSSPLFHPTRLRIRWAPPPVGWCKLNFDGSVFNDGSRRASIGGVIRGCDGGVVLAFAETT 94
Query: 205 GTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCL-------ELPASFLDPNRA 257
E AL GL L + +++VE + V+ L +PA+ D +
Sbjct: 95 EHWTVGVVEARALIKGLKLALKCFVERIVVEGDDLVLVQLLRGEETQTRIPAAMHDEILS 154
Query: 258 LILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTP-PYALAPIFQK 316
L+ E+ R+ I RE NS A+ L P L P P A+ +
Sbjct: 155 LLRRFTEFEVRH-------IYREGNSVAHTLCRQAYQGP--GLWTERVPMPGAVREKIDE 205
Query: 317 DSTGIVQTR 325
D G++ R
Sbjct: 206 DCRGVLHER 214
>gi|357472719|ref|XP_003606644.1| Histone H2A [Medicago truncatula]
gi|355507699|gb|AES88841.1| Histone H2A [Medicago truncatula]
Length = 239
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 163 PPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLN 222
P ++W+ N +G+ + AG G+ R ++GKWI +SK LG ++ +EL ++ GLN
Sbjct: 149 PESSWIHFNTDGTY-KGGSLAGCRGVSRGKNGKWICIFSKRLGVCSAYVAELLGIFEGLN 207
Query: 223 LVWERGFRKVLVECNSHEAVKCL 245
L GF K+ + S V +
Sbjct: 208 LARPHGFHKIELHVVSQVVVTTI 230
>gi|255554636|ref|XP_002518356.1| conserved hypothetical protein [Ricinus communis]
gi|223542451|gb|EEF43992.1| conserved hypothetical protein [Ricinus communis]
Length = 106
Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+ W PP WVKL+ +GS G+A AGGI+R ++G G++ N+G L SE +
Sbjct: 2 VGWDYPPMQWVKLHTDGSLRIQSGNAAAGGIIRFDNGNLDSGFTCNIGICTMLVSESRGV 61
Query: 218 YHGL 221
HGL
Sbjct: 62 IHGL 65
>gi|255551285|ref|XP_002516689.1| conserved hypothetical protein [Ricinus communis]
gi|223544184|gb|EEF45708.1| conserved hypothetical protein [Ricinus communis]
Length = 120
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 36/114 (31%)
Query: 136 VNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGK 195
+N +IDAD + N I W P P W+KLN++G +G GAGG++RD
Sbjct: 23 MNVLIDADNNNLY------NENISWHPLPVGWIKLNVDGGVEDGKG--GAGGLIRD---- 70
Query: 196 WILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPA 249
SN LA W+ G+R+VLVE +S E V L A
Sbjct: 71 -----------SNVLA-------------WDLGYRRVLVESDSKEVVDMLTSSA 100
>gi|357518403|ref|XP_003629490.1| hypothetical protein MTR_8g078090 [Medicago truncatula]
gi|355523512|gb|AET03966.1| hypothetical protein MTR_8g078090 [Medicago truncatula]
Length = 74
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
LN+ SS + G +G GG +RD G W+ G+S+ +G SN+L +EL A+ HGL L ++G
Sbjct: 6 LNVYESSLGSHGCSGFGGSLRDSGGTWLCGFSEFIGISNNLHAELLAIMHGLKLSRDKGQ 65
Query: 230 R 230
R
Sbjct: 66 R 66
>gi|255562894|ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538337|gb|EEF39944.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 483
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILG-YSKNLGTSNSL 210
H W P T KLN++ SSS +G +GA ++RD +G WI G +N
Sbjct: 335 HFAGGDCLWQKPATGKYKLNVDASSSAERGKSGASFVLRDNAGIWITGVLIIRPYIANPD 394
Query: 211 ASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNW 270
+E WAL L+ + +G +V +E + ++ +EL L PN L LC
Sbjct: 395 VAEAWALKEALSWIHAKGMEEVQIET---DCLRNIELLEEELHPNSYL-------LCLLK 444
Query: 271 DCKLQLILREANSC 284
DC Q +LR N C
Sbjct: 445 DC--QDLLRVLNRC 456
>gi|238478341|ref|NP_001154303.1| RnaseH domain-containing protein [Arabidopsis thaliana]
gi|332189602|gb|AEE27723.1| RnaseH domain-containing protein [Arabidopsis thaliana]
Length = 257
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 11/135 (8%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG--TSNSLASELWAL 217
W PP W K N +G+ + + AG ++RD+ G LG + +G T+N + SEL AL
Sbjct: 82 WTTPPIGWTKCNYDGTY-HSNAPSKAGWLLRDDRGT-FLGAAHAIGSITTNPMESELQAL 139
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCRE---YLCRNWDCKL 274
+ W RG+RK+ E ++ E + + +S N A+ R+ + + +CK
Sbjct: 140 VMAMQHCWSRGYRKIYFEGDNKEVSEIVNGRSS----NFAVFNWIRDISAWRSKFEECKF 195
Query: 275 QLILREANSCANWLA 289
R +N A+ LA
Sbjct: 196 TWTRRFSNMAADALA 210
>gi|15228144|ref|NP_178523.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|4587608|gb|AAD25836.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
gi|50058827|gb|AAT69158.1| hypothetical protein At2g04420 [Arabidopsis thaliana]
gi|330250739|gb|AEC05833.1| RNase H domain-containing protein [Arabidopsis thaliana]
Length = 221
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG--TSNSL 210
R ++ W PP W+K N +GS + +G ++RD+ G + G ++ +G +N+L
Sbjct: 56 RESTHQKWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRDDKG-FYKGAAQAVGGTMNNAL 114
Query: 211 ASELWALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
SEL AL + W +G+RKV+ E +S + + L
Sbjct: 115 ESELQALVMAMQHTWSQGYRKVIFEGDSKQVEELL 149
>gi|224084536|ref|XP_002307329.1| predicted protein [Populus trichocarpa]
gi|222856778|gb|EEE94325.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 71/167 (42%), Gaps = 6/167 (3%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W P W+KLN +GS +AG GG+ RD G I G+ + ELWA++
Sbjct: 167 WKRPDFGWIKLNTDGSIDSE--NAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIWR 224
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILR 279
GL L + + VE +S V + + A + R L + K+ R
Sbjct: 225 GLVLALNLHIQVLWVESDSLSVVNTINRQQPYSGKADACLKQIRLLLKKFKKHKVSHSWR 284
Query: 280 EANSCANWLAAH-CENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
E N A++LA E + A F P +L I + D+ G+V R
Sbjct: 285 ETNRAADYLAKMVVERDVVLWPADF---PTSLNNIIKDDAEGMVYCR 328
>gi|297725701|ref|NP_001175214.1| Os07g0501200 [Oryza sativa Japonica Group]
gi|255677791|dbj|BAH93942.1| Os07g0501200 [Oryza sativa Japonica Group]
Length = 620
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 130 LSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIV 189
+KGK V S + C G ++ P W P W+KLN++GS GS G G ++
Sbjct: 433 FAKGKFVVS--NLGCMKGTSQVPDPKVLNHWEKPNPGWMKLNVDGSFDARYGSGGIGAVL 490
Query: 190 RDESGKWILGYSKNLGT-SNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELP 248
R+ +G I + N+ +L +EL A G+ + + +VE +S E +K +
Sbjct: 491 RNSAGSLI--FCGNMSRCGGALEAELLACREGIIMALQWTLLPFIVETDSLELLKLVGAG 548
Query: 249 ASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLA 289
+S L+ R+ L N + ++ I RE N +++LA
Sbjct: 549 SSDRSELAFLVKEVRDPLSGNREIIIRKIHRENNCVSDFLA 589
>gi|242046932|ref|XP_002461212.1| hypothetical protein SORBIDRAFT_02g042875 [Sorghum bicolor]
gi|241924589|gb|EER97733.1| hypothetical protein SORBIDRAFT_02g042875 [Sorghum bicolor]
Length = 518
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 150 KIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTS-N 208
+I P R W PP ++K+N++GS + G IVR+ G+ +L + N+ + +
Sbjct: 339 QIQVPRKR--WKPPDQQFLKINVDGSFIKEDNVGACGFIVRNYLGEPVLAGASNISPALD 396
Query: 209 SLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCR 268
+L++E A L + G + +E + + + A + PN L S RE L
Sbjct: 397 ALSAETLACLFALESAQQVGISWIELEMDCSQLRDAITSQARDMAPNGVLFRSIRELLFD 456
Query: 269 NWDC-KLQLILREANSCANWLAAHCENQPLGSLAVFDTP 306
+++C K+ L R NS A+ +A + G V+D P
Sbjct: 457 HFNCNKILLSPRSCNSSAHEIAKIALSWDPGQFLVWDDP 495
>gi|357484637|ref|XP_003612606.1| Replication protein A1-like protein [Medicago truncatula]
gi|355513941|gb|AES95564.1| Replication protein A1-like protein [Medicago truncatula]
Length = 708
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 168 VKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASELWALYHGLNLVWE 226
V LN++ S + AG GG++R+ + ++ G+S + +SN L +EL+A+Y GL L
Sbjct: 181 VILNVDLSCLGSPTRAGYGGVLRNYASFYLSGFSGYIQNSSNILFAELYAIYQGLLLAKN 240
Query: 227 RGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCAN 286
G + NS + L P LI +E L + + LR+ N CA+
Sbjct: 241 MGNSDLFCYSNSLHCINILNGPLMRFHVYAVLIQDIKE-LLEQGNVTMNHTLRKGNQCAD 299
Query: 287 WLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGI 321
+LA + +++PP L + + D I
Sbjct: 300 FLAKLGASSN-SEFLCYESPPTDLLNLLRSDEKLI 333
>gi|55167951|gb|AAV43820.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55168234|gb|AAV44100.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222631228|gb|EEE63360.1| hypothetical protein OsJ_18172 [Oryza sativa Japonica Group]
Length = 220
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 75/189 (39%), Gaps = 18/189 (9%)
Query: 146 PGFEKIHRPNSRICWMPPPTNWVKLNIEGSS-SRAQGSAGAGGIVRDESGKWILGYSKNL 204
P H RI W PPP W KLN +GS + A GG++R G +L +++
Sbjct: 35 PSSPPFHPTRLRIRWAPPPVGWCKLNFDGSVFNDGSRRASIGGVIRGCDGGVVLAFAETT 94
Query: 205 GTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCL-------ELPASFLDPNRA 257
E AL GL L +++VE + V+ L +PA+ D +
Sbjct: 95 EHWTVGVVEARALIKGLKLALACFVERIVVEGDDLVLVQLLRGEETQTRIPAAMHDEILS 154
Query: 258 LILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTP-PYALAPIFQK 316
L+ E+ R+ I RE NS A+ L P L P P A+ +
Sbjct: 155 LLRRFTEFEVRH-------IYREGNSVAHTLCRQAYQGP--GLWTERVPMPGAVREKIDE 205
Query: 317 DSTGIVQTR 325
D G++ R
Sbjct: 206 DCRGVLHER 214
>gi|255580859|ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
gi|223529168|gb|EEF31146.1| hypothetical protein RCOM_0494170 [Ricinus communis]
Length = 329
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 162 PPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGY-SKNLGTSNSLASELWALYHG 220
PP +VK N++G+ A G +G G ++RD +G +++G + G N +E L
Sbjct: 170 PPQPGFVKCNVDGAVFTASGRSGFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREA 229
Query: 221 LNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILRE 280
+ V G V+ E ++ V + A+ L A+I CR L + +Q I ++
Sbjct: 230 VQWVLSLGRSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCNYSVQFIRKQ 289
Query: 281 ANSCANWLAAHCENQPLGSLAVFDTPP 307
AN A+ LA Q +F PP
Sbjct: 290 ANLVAHSLARASHLQD--GFNMFSVPP 314
>gi|255562403|ref|XP_002522208.1| hypothetical protein RCOM_1732210 [Ricinus communis]
gi|223538579|gb|EEF40183.1| hypothetical protein RCOM_1732210 [Ricinus communis]
Length = 95
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
I W PPP +W+KLN G++ A G+ G GG+ R+ G + L T+ + +E+ A
Sbjct: 7 IKWHPPPPSWIKLNSNGATRGAPGTTGVGGLFRNCRGVVKGCFIVPLSTTYAFVAEIKAA 66
Query: 218 YHGLNLVWERGFRKVLVECNS 238
+G++ + G+ K+ +E +S
Sbjct: 67 IYGIDKAYNFGWNKIWLESDS 87
>gi|357482407|ref|XP_003611489.1| hypothetical protein MTR_5g014470 [Medicago truncatula]
gi|355512824|gb|AES94447.1| hypothetical protein MTR_5g014470 [Medicago truncatula]
Length = 92
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 177 SRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVEC 236
S A+ +AG G++RD G + G+S+ +G SN+L +L+A+ HGL L +RG R V+
Sbjct: 18 SLARNNAGPLGVIRDPDGARLCGFSEFIGISNNLHVKLFAIMHGLKLPLDRGHRNVICYS 77
Query: 237 NSHEAVKCLELP 248
+ A+ ++ P
Sbjct: 78 DPLHALNLIQAP 89
>gi|125591447|gb|EAZ31797.1| hypothetical protein OsJ_15951 [Oryza sativa Japonica Group]
Length = 978
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESG--KWILGYSKNLGTSNSLASEL 214
R W PPP W+KLN G+ SAG GG+ ++ G + +G +LG + + +
Sbjct: 574 RNTWSPPPKGWIKLNFHGTGCSKNRSAGMGGVFHNDEGALSYFIG---SLGNVDQTVASI 630
Query: 215 WALYHGLNLVWERG--FRKVLVE 235
AL HGL ++ E +K++VE
Sbjct: 631 QALEHGLEIMLEHHEPVKKLIVE 653
>gi|125549515|gb|EAY95337.1| hypothetical protein OsI_17165 [Oryza sativa Indica Group]
Length = 941
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESG--KWILGYSKNLGTSNSLASEL 214
R W PPP W+KLN G+ SAG GG+ ++ G + +G +LG + + +
Sbjct: 574 RNTWSPPPKGWIKLNFHGTGCSKNRSAGMGGVFHNDEGALSYFIG---SLGNVDQTVASI 630
Query: 215 WALYHGLNLVWERG--FRKVLVE 235
AL HGL ++ E +K++VE
Sbjct: 631 QALEHGLEIMLEHHEPVKKLIVE 653
>gi|38346706|emb|CAE04856.2| OSJNBa0086O06.4 [Oryza sativa Japonica Group]
Length = 891
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESG--KWILGYSKNLGTSNSLASEL 214
R W PPP W+KLN G+ SAG GG+ ++ G + +G +LG + + +
Sbjct: 574 RNTWSPPPKGWIKLNFHGTGCSKNRSAGMGGVFHNDEGALSYFIG---SLGNVDQTVASI 630
Query: 215 WALYHGLNLVWERG--FRKVLVE 235
AL HGL ++ E +K++VE
Sbjct: 631 QALEHGLEIMLEHHEPVKKLIVE 653
>gi|357500715|ref|XP_003620646.1| hypothetical protein MTR_6g088150 [Medicago truncatula]
gi|355495661|gb|AES76864.1| hypothetical protein MTR_6g088150 [Medicago truncatula]
Length = 83
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG 205
W PP VKLNI+GS A G G GG++RD G WI+G+S N G
Sbjct: 24 WTPPSDGCVKLNIDGSCG-ASGDIGYGGLIRDNKGNWIVGFSSNDG 68
>gi|124359982|gb|ABN07998.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 186
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYS-KNLGTSNSL 210
HRP W P VK+N + ++ + G G G I+RDE G + + + G +L
Sbjct: 36 HRPAKNTKWKRPNLGLVKVNTD-ANLQNHGKWGLGIIIRDEVGLVMAASTWETDGNDRAL 94
Query: 211 ASELWALYHGLNLVWERGFRKVLVECNSHEAVKC-LELPASFLDPNRALILSCREYLCRN 269
+E +AL G+ + GFRKV+ E ++ + +K + S D
Sbjct: 95 EAEAYALLTGMRFAKDCGFRKVVFEGDNEKLMKMEIHKAKSGFDI--------------- 139
Query: 270 WDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDS 318
C+ Q R N AN LA ++P + + P A++ ++ +D+
Sbjct: 140 --CQFQFTFRSGNKVANRLAQLAHSEP--NKVWIEEVPIAISSLYFQDN 184
>gi|2583130|gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 11/163 (6%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTSNSLASELWA 216
+ W PP WVK N +G+ S+ G+ G G ++R+ +G+ + LG + L +E+ A
Sbjct: 1213 VKWQPPSHGWVKCNTDGAWSKDLGNCGVGWVLRNHTGRLLWLGLRALPSQQSVLETEVEA 1272
Query: 217 LYHGLNLVWERGFRKVLVECNSHEAVKCL--ELPASFLDPNRALILSCREYLCRNWDCKL 274
L + + +R+V+ E +S V + E+ L P I R L + K
Sbjct: 1273 LRWAVLSLSRFNYRRVIFESDSQYLVSLIQNEMDIPSLAPR---IQDIRNLLRHFEEVKF 1329
Query: 275 QLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKD 317
Q RE N+ A+ A SL +D Y++ P + K+
Sbjct: 1330 QFTRREGNNVADRTARESL-----SLMNYDPKMYSITPDWIKN 1367
>gi|87162851|gb|ABD28646.1| Ribonuclease H [Medicago truncatula]
Length = 208
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LASELWALYHGLNLVWERG 228
LN++GS S AG GGI+R+ +G ++ +S + S L +EL A++ G ++ + G
Sbjct: 53 LNVDGSCSGIPTRAGYGGIIRNSAGLYLSCFSGFIADSTDILLAELTAIHRGFSIASDMG 112
Query: 229 FRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWL 288
++ +S ++ + AS LI ++ L + + +Q LRE N CA+++
Sbjct: 113 VNEMACYSDSLLSINLITGQASKYHAYAVLIQDIKDLL-SSHNFSIQHCLREGNQCADFM 171
Query: 289 AAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
A + + +PP L + + D+ G R+
Sbjct: 172 AKFGASSN-NVCFIHPSPPQDLHVLLRNDAIGTCFPRA 208
>gi|242084628|ref|XP_002442739.1| hypothetical protein SORBIDRAFT_08g002035 [Sorghum bicolor]
gi|241943432|gb|EES16577.1| hypothetical protein SORBIDRAFT_08g002035 [Sorghum bicolor]
Length = 180
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
Query: 151 IHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNS 209
I R + CW+PP T+ +K+N +G+ +A+ G IVRD +G ++ + + ++
Sbjct: 4 IKRKSGISCWVPPTTDVLKINFDGAFLKAEKKGAWGFIVRDHTGASVVAGAGRINVVHDA 63
Query: 210 LASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRN 269
L++E A L + + G ++++E +S V L+ + L + + N
Sbjct: 64 LSAESQACLAALYVAIDHGLSQIILETDSTTLVDALQSRSYDFSACGVLFREAKFLMSMN 123
Query: 270 W-DCKLQLILREANSCANWLA 289
+ + + R +N CA+ LA
Sbjct: 124 FIRADVVHVPRSSNRCAHELA 144
>gi|255587346|ref|XP_002534238.1| conserved hypothetical protein [Ricinus communis]
gi|223525658|gb|EEF28145.1| conserved hypothetical protein [Ricinus communis]
Length = 307
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS 212
R I W PP W KLN +G+ + ++ A GI+R+ + +
Sbjct: 189 RSEVLIRWKSPPQGWYKLNTDGAV-KGNVASYARGIIRN---------------NKVFGA 232
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC 272
ELW +++G+ + WE G ++++++ ++ +K ++ ++ LI + ++ + R W
Sbjct: 233 ELWGVHYGILMAWEIGIQQLIIKVDNKSVIKAIKGMSTNSYGYNLLINNIKQVMHRPWKV 292
Query: 273 KLQLILREANSCAN 286
+ + +EAN A+
Sbjct: 293 IITHVYKEANRAAD 306
>gi|125600794|gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japonica Group]
Length = 613
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNSLAS 212
P+S+ W PPP +KLNI+G+ A S G G I+RD G +L + + ++L++
Sbjct: 441 PSSQSTWCPPPQCVLKLNIDGAFQAANLSGGWGFILRDHEGNGVLARAGRIELVHDALSA 500
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLE 246
E A H L V GF VE +S V L+
Sbjct: 501 EAVACLHALRAVLNHGFSYFSVETDSSILVSALD 534
>gi|62732851|gb|AAX94970.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77550533|gb|ABA93330.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 816
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWALY 218
W PPP W K+N++G+ S + G G I RD GK +L K L +++ E+ A Y
Sbjct: 491 WEPPPEGWAKINVDGAFSMTDNTGGIGVIARDSEGKALLSSWKYLHRCADAEQVEILACY 550
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
G+ L E + +++E + + + LI S + + + ++Q
Sbjct: 551 EGMKLAAEWIRKPIILESDCVTVIGRMTAEDEERSRWTFLIRSAKAVMRSLQEVRIQHRK 610
Query: 279 REANSCANWLA------AHC 292
RE N A+ LA AHC
Sbjct: 611 RECNRVAHELAQLAKRTAHC 630
>gi|218200673|gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indica Group]
Length = 1300
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 1/141 (0%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASELWA 216
+ W+ P W+KLN++GS GS G G ++R+ GK I ++ ++L +EL A
Sbjct: 1140 VRWVRPQAGWMKLNVDGSYDPRDGSGGIGAVLRNSEGKLIFAACGSMCRPVSALEAELVA 1199
Query: 217 LYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQL 276
G+ L + F ++VE + E VK + + LI ++ + N + +
Sbjct: 1200 CKEGIILALQWTFLPIIVETDCLELVKLVAEQGKVMSDLGFLIREIKDLVKGNREIVINK 1259
Query: 277 ILREANSCANWLAAHCENQPL 297
+ R + ++LA ++ L
Sbjct: 1260 VTRSQSIGCHFLANKGRSESL 1280
>gi|302342840|ref|YP_003807369.1| ribonuclease H [Desulfarculus baarsii DSM 2075]
gi|301639453|gb|ADK84775.1| ribonuclease H [Desulfarculus baarsii DSM 2075]
Length = 202
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Query: 149 EKIHRPNSRICWMPPPTNWV-KLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTS 207
E P SR + P + L +G + G AGAG ++ D+SG I S+ LG +
Sbjct: 51 EPTQAPPSRPADLARPQAFAATLYADGGARGNPGPAGAGAVIYDQSGAQIAALSRYLGQA 110
Query: 208 NSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCL----ELPASFLDPNRALILSCR 263
+ +E AL GL E G ++ V +S VK L ++ A L P L +
Sbjct: 111 TNNVAEYQALLMGLEAALELGVGQIDVRLDSELLVKQLGGQYQVKAPHLKP---LFQKAK 167
Query: 264 EYLCRNWDCKLQLILREANSCANWLA 289
L + + + RE N A+ LA
Sbjct: 168 ALLQQFTGAHIVHVRREQNGVADGLA 193
>gi|124360661|gb|ABN08650.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 82
Score = 51.2 bits (121), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 164 PTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNL 223
P ++K+N++ SS R A GGI+R + G WI +S G +++L EL ++ GL L
Sbjct: 7 PGGYIKVNVDSSSFRIPNVARFGGILRYDFGTWIHHFSGICGITSNLFGELATIWRGLPL 66
Query: 224 VWERGFRKVLVE 235
W +R +V+
Sbjct: 67 AWNLSYRDNIVK 78
>gi|242033855|ref|XP_002464322.1| hypothetical protein SORBIDRAFT_01g016130 [Sorghum bicolor]
gi|241918176|gb|EER91320.1| hypothetical protein SORBIDRAFT_01g016130 [Sorghum bicolor]
Length = 133
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 149 EKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSN 208
+ I R +RI W PPP WVK+N++GS + G AGA + RD+SGK I ++ +
Sbjct: 60 KAITRQANRI-WEPPPLGWVKINVDGSFIKQSGEAGAAAVARDDSGKVIFAAWRSFEHCD 118
Query: 209 SLASEL 214
S L
Sbjct: 119 SALDHL 124
>gi|222640671|gb|EEE68803.1| hypothetical protein OsJ_27549 [Oryza sativa Japonica Group]
Length = 201
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLAS 212
P ++ W PP W+K N++GS G G ++RD G I K++ S+ L +
Sbjct: 40 PACKMRWERPPEGWMKANVDGSFDSQLLKGGIGVVIRDWEGAIIFASCKSMCRCSSPLEA 99
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC 272
EL AL G+ L R V++E + A++ ++ L+ R+ L + +
Sbjct: 100 ELLALREGIYLFLIWTLRPVILETDCLVALQMIQSKERATSELAYLVREIRDLLNGSREF 159
Query: 273 KLQLILREANSCANWLA--AHCEN 294
L I RE N +++LA CE+
Sbjct: 160 VLWKIRREQNMVSHFLANKRRCED 183
>gi|125551901|gb|EAY97610.1| hypothetical protein OsI_19535 [Oryza sativa Indica Group]
Length = 238
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 15/146 (10%)
Query: 151 IHRPNSRICWMPPPTNWVKLNIEGSS-SRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS 209
H RI W PPP W KLN +GS + A GG++R G +L +++
Sbjct: 40 FHPTRLRIRWAPPPVGWCKLNFDGSVFNDGSRRASIGGVIRGCDGGVVLAFAETTEHWTV 99
Query: 210 LASELWALYHGLNLVWERGFRKVLVECNSHEAVKCL-------ELPASFLDPNRALILSC 262
E AL GL L + +++VE + V+ L +PA+ D +L+
Sbjct: 100 GVVEARALIKGLKLALKCFVERIVVEGDDLVLVQLLRGEETQTRIPAAMHDEILSLLRRF 159
Query: 263 REYLCRNWDCKLQLILREANSCANWL 288
E+ R+ I RE NS A+ L
Sbjct: 160 TEFEVRH-------IYREGNSVAHTL 178
>gi|116830237|gb|ABK28076.1| unknown [Arabidopsis thaliana]
Length = 139
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Query: 185 AGGIVRDESGKWI-LGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVK 243
AG ++RDESG+++ G + TSN+L SE AL + W G RK+ E ++ E ++
Sbjct: 5 AGWVIRDESGQFVGAGQATGNHTSNALESEFQALLIAMQSCWSHGHRKIWFEGDNREVME 64
Query: 244 CLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLA-AHCENQPLGSLAV 302
L S D I + + R +C+ I R+ N A+ LA +H
Sbjct: 65 ILNRRKSRFDTFN-WIRDVQAWKQRFQECRFTWINRKQNKPADILAKSHLPQNE--QFKF 121
Query: 303 FDTPPYALAPIFQKDSTG 320
+D P ++ Q ++ G
Sbjct: 122 YDYIPIVISSALQLENFG 139
>gi|255603333|ref|XP_002538029.1| conserved hypothetical protein [Ricinus communis]
gi|223514118|gb|EEF24354.1| conserved hypothetical protein [Ricinus communis]
Length = 141
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLA 211
R S I W P +WVK NI+GS A AGG+++D G W G++ +G + L
Sbjct: 18 RRRVSLISWKAPKDDWVKANIDGSVIEGSFLAAAGGVIKDSIGTWKGGFAIKIGIGSKLI 77
Query: 212 SELWALY 218
W ++
Sbjct: 78 ERDWEVF 84
>gi|222630057|gb|EEE62189.1| hypothetical protein OsJ_16976 [Oryza sativa Japonica Group]
Length = 653
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWALY 218
W PPP W K+N++G+ S + G G I RD GK +L K L +++ E+ A Y
Sbjct: 491 WEPPPEGWAKINVDGAFSMTDNTGGIGVIARDSEGKALLSSWKYLHRCADAEQVEILACY 550
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
G+ L E + +++E + + + LI S + + + ++Q
Sbjct: 551 EGMKLAAEWIRKPIILESDCVTVIGRMTAEDEERSRWTFLIRSAKAVMRSLQEVRIQHRK 610
Query: 279 REANSCANWLA------AHC 292
RE N A+ LA AHC
Sbjct: 611 RECNRVAHELAQLAKRTAHC 630
>gi|332322128|emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYS-KNLGTSNSLASELWALY 218
W PP VKLN++ + + G G GG+VRD G +L + +E +L
Sbjct: 1210 WSVPPVGMVKLNVDAAVFKHVG-IGMGGVVRDAEGDVLLATCCGGWAMEDPAMAEACSLR 1268
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
+GL + +E GFR ++VE + + L AS + P ++ + + + +
Sbjct: 1269 YGLKVAYEAGFRNLVVEMDCKKLFLQLRGKASDVTPFGRVVDDILYLASKCSNVVFEHVK 1328
Query: 279 REANSCANWLAAHCEN 294
R N A+ LA C+N
Sbjct: 1329 RHCNKVAHLLAQMCKN 1344
>gi|222631196|gb|EEE63328.1| hypothetical protein OsJ_18139 [Oryza sativa Japonica Group]
Length = 222
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 15/151 (9%)
Query: 146 PGFEKIHRPNSRICWMPPPTNWVKLNIEGSS-SRAQGSAGAGGIVRDESGKWILGYSKNL 204
P H RI W PPP W KLN +GS + A GG++R G +L +++
Sbjct: 35 PSSPPFHPTRLRIRWAPPPVGWCKLNFDGSVFNDGSRRASIGGVIRGCDGGVVLAFAETT 94
Query: 205 GTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCL-------ELPASFLDPNRA 257
E AL GL L +++VE + V+ L +PA+ + +
Sbjct: 95 EHWTVGVVEARALIKGLKLALACFVERIVVEGDDLVLVQLLRGEETQTRIPAAMHEEILS 154
Query: 258 LILSCREYLCRNWDCKLQLILREANSCANWL 288
L+ E+ R+ I RE NS A+ L
Sbjct: 155 LLRRFTEFEVRH-------IYREGNSVAHTL 178
>gi|357467109|ref|XP_003603839.1| hypothetical protein MTR_3g114790 [Medicago truncatula]
gi|355492887|gb|AES74090.1| hypothetical protein MTR_3g114790 [Medicago truncatula]
Length = 125
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 161 MPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHG 220
+PPP +KLNI+GS + G G GG+VR+ G I G+S + L++EL
Sbjct: 3 IPPPKGTLKLNIDGSFLQDFGCLGCGGVVRNHDGDLIAGFSHYKVGGDVLSAELCDKKIS 62
Query: 221 LNLVWERGFRKVLVECNSHEAV 242
+ ++ F ++ E + E V
Sbjct: 63 FDFCSKKDFVNIICESDCFEGV 84
>gi|255581135|ref|XP_002531381.1| nuclease, putative [Ricinus communis]
gi|223529011|gb|EEF31001.1| nuclease, putative [Ricinus communis]
Length = 132
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 204 LGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCR 263
+G+ NSL +W ++GL L WE G RKV++E ++ V+ +L + N +L +
Sbjct: 17 IGSCNSLLPGMWGGWYGLKLGWEAGIRKVVLEVDNQLVVQ--QLSSDIYHRNYSLNMI-- 72
Query: 264 EYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQ 323
W +++ + RE N C + LA+ N + V P + I +D G+
Sbjct: 73 -----KWTVQVKDVYREGNQCVDALASIGRNVA-SRMHVLQETPEIVRIIMDEDLRGVAL 126
Query: 324 TR 325
R
Sbjct: 127 PR 128
>gi|255552578|ref|XP_002517332.1| hypothetical protein RCOM_0850580 [Ricinus communis]
gi|223543343|gb|EEF44874.1| hypothetical protein RCOM_0850580 [Ricinus communis]
Length = 111
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 185 AGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLV 234
GG++R SG W G++ NL + +E W + +GL L W+RGFR V++
Sbjct: 13 TGGLIRTCSGVWYSGFAANLSICSVFTAECWGVLYGLCLAWQRGFRCVIL 62
>gi|255559814|ref|XP_002520926.1| conserved hypothetical protein [Ricinus communis]
gi|223539892|gb|EEF41471.1| conserved hypothetical protein [Ricinus communis]
Length = 135
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 199 GYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPN-RA 257
G++ + ++L E+W + L L W GF+K+++E +S A++ + + D N +
Sbjct: 6 GFAHKISVCSALEVEVWEALNVLILAWMMGFKKIILEVDSATAIQLCK-KGNTTDRNCSS 64
Query: 258 LILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAP---IF 314
++ + L +WD I EAN A+WL + + PLG P ALA +
Sbjct: 65 MMAEIHKCLDWDWDVNCVHIYHEANKYADWLTNYAFDLPLG----LHFLPKALAAVHVVI 120
Query: 315 QKDSTGIVQTRS 326
D G+ + RS
Sbjct: 121 AADLAGVSELRS 132
>gi|356551779|ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
Length = 470
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 8/168 (4%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W P W KLN +GS + GG++RD G+ I + + +ELWA++
Sbjct: 308 WTKPEFGWTKLNTDGSIH--SNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAELWAIWR 365
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQL--I 277
GL L G + + VE +S V+ + L P L+ L + +D K Q+
Sbjct: 366 GLVLSLGLGIKAIWVESDSMSVVRTVNRKQ--LCPKAVGYLNQIWKLLKKFD-KYQISHS 422
Query: 278 LREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
RE N A+ LA L+ D PP +L+ I + D+ G R
Sbjct: 423 WRETNRAADHLAKMDLLANDVVLSPVDFPP-SLSRIIEDDAKGTKYRR 469
>gi|222623392|gb|EEE57524.1| hypothetical protein OsJ_07834 [Oryza sativa Japonica Group]
Length = 408
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL-GYSKNLGTSNSLASELWALY 218
W+ PP W KLN++GS + + G AG G I+R+ G+ I G ++L SEL A
Sbjct: 244 WVRPPPGWSKLNVDGSFNNSSGQAGIGMILRNSEGEAIFTGRQAIANCVDALESELLACK 303
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
GL+L +++E +S AV + LI R + K+Q +
Sbjct: 304 FGLDLALHWSILPIILETDSILAVSAINGKTEDKSRFAYLIRELRLLQKGEREVKVQKVH 363
Query: 279 REANSCANWLA 289
R+ N ++ LA
Sbjct: 364 RDHNKISHVLA 374
>gi|242054685|ref|XP_002456488.1| hypothetical protein SORBIDRAFT_03g037190 [Sorghum bicolor]
gi|241928463|gb|EES01608.1| hypothetical protein SORBIDRAFT_03g037190 [Sorghum bicolor]
Length = 589
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LASELWALY 218
W PP +K+N +G+ + +G+ AG +VRD SG + ++ LG S L +E A+
Sbjct: 428 WSPPAPGMLKINSDGAFLQDRGTGAAGAVVRDSSGNFCAASARWLGPVGSVLIAEAEAIR 487
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
GL L+ + ++ E ++ E V + A++ E + +L +
Sbjct: 488 DGLRLIPQGTMEHIIGETDAREVVALWKNRTRQRSEIAAILKEIEEIVSAFTSFELIHVR 547
Query: 279 REANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKD 317
REANS A+ A + L S F +PP L Q D
Sbjct: 548 REANSVAH-TCARFASSSLDSHVWF-SPPSFLQRCLQSD 584
>gi|357485817|ref|XP_003613196.1| hypothetical protein MTR_5g033870 [Medicago truncatula]
gi|355514531|gb|AES96154.1| hypothetical protein MTR_5g033870 [Medicago truncatula]
Length = 159
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 222 NLVWE----RGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLI 277
NL+ E RG R ++ NS + +E F I R+Y+ +W +L I
Sbjct: 51 NLIVEKGSVRGLRDIICYTNSMHIIHIVEYVDVFTHNYGNEIAIIRKYMTNDWTFQLCHI 110
Query: 278 LREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTRSH 327
LRE N C ++L + + +L + PP L + + DS G+ RS
Sbjct: 111 LREGNMCVDFLTK-LDKRCTSNLLIVLNPPAGLPLLLEADSMGVAYHRSQ 159
>gi|356559997|ref|XP_003548282.1| PREDICTED: TMV resistance protein N-like [Glycine max]
Length = 1420
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 151 IHRPNSRICWMPP----PTNWV-KLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG 205
I P + + W P +W+ +LN+ G+ R+ +A GGI RD + +++LG+S LG
Sbjct: 1224 ILMPRNLLKWRRPLPLSHGHWLLRLNVSGAYDRSSDTAACGGIFRDNNDRFVLGFSVKLG 1283
Query: 206 --TSNSLASELWALYHGLNL 223
SN E+W +YHG+ +
Sbjct: 1284 ECLSND-EGEIWGIYHGMKI 1302
>gi|222632657|gb|EEE64789.1| hypothetical protein OsJ_19645 [Oryza sativa Japonica Group]
Length = 205
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 146 PGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL- 204
P ++IH + W PPP W K+N++G+ + G G G ++RD G+ +L + L
Sbjct: 32 PSVKEIHTKSK---WQPPPEGWAKINVDGAFDQGDGRCGIGVVIRDCLGRVLLSSWRYLR 88
Query: 205 GTSNSLASELWALYHGLNLVWERGFRKVLVE 235
S + +EL A G+NL E V++E
Sbjct: 89 RCSQAEEAELLACSEGINLAAEWIHLPVILE 119
>gi|224110444|ref|XP_002315521.1| predicted protein [Populus trichocarpa]
gi|222864561|gb|EEF01692.1| predicted protein [Populus trichocarpa]
Length = 360
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 151 IHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSL 210
+ + +I W P +++K+N++GSS G GAGG++R +G +++G++ G + +L
Sbjct: 285 VTKETIQILWQRLPWDFIKINVDGSSLGNSGRIGAGGLIRFSTGNFLVGFTALAGVACNL 344
Query: 211 ASELWALYHGLNLVWE 226
EL + L L W+
Sbjct: 345 LPELLDIAKELKLAWD 360
>gi|297795177|ref|XP_002865473.1| hypothetical protein ARALYDRAFT_917421 [Arabidopsis lyrata subsp.
lyrata]
gi|297311308|gb|EFH41732.1| hypothetical protein ARALYDRAFT_917421 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 145 PPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL 204
P +HR W PP ++K N +GS R G G I+R + G+ LG + +
Sbjct: 39 PANRNHVHR------WTTPPVGFIKCNYDGSYVRDLTFKG-GWILRSDFGR-FLGAGQAV 90
Query: 205 G--TSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
G T+N L SE AL + W +G++KV E ++ E V +
Sbjct: 91 GKVTNNPLESEFQALTMAMQSCWSKGYKKVYFEGDNKEVVAII 133
>gi|357457493|ref|XP_003599027.1| hypothetical protein MTR_3g026800 [Medicago truncatula]
gi|355488075|gb|AES69278.1| hypothetical protein MTR_3g026800 [Medicago truncatula]
Length = 177
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 167 WVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWE 226
++ LNI+G R A GGI+ D K+I ++ + + L ELW ++ G + W
Sbjct: 19 YIALNIDGVVIRTCELASCGGILGDYVDKFICAFAAKIRPCSVLEDELWRIFRGWKISWS 78
Query: 227 RGFR 230
RGFR
Sbjct: 79 RGFR 82
>gi|357442703|ref|XP_003591629.1| hypothetical protein MTR_1g089990 [Medicago truncatula]
gi|92882343|gb|ABE86674.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
gi|355480677|gb|AES61880.1| hypothetical protein MTR_1g089990 [Medicago truncatula]
Length = 119
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 149 EKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI 197
+++ + +ICW PPP W +LN +G+ ++ +AG GG+++D S +WI
Sbjct: 71 KEVQKGCVKICWSPPPFGWTRLNTDGALKKSIDAAGCGGLLKDGSERWI 119
>gi|125550682|gb|EAY96391.1| hypothetical protein OsI_18290 [Oryza sativa Indica Group]
Length = 653
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWALY 218
W PPP W K+N++G+ S + G G I RD GK +L + L +++ E+ A Y
Sbjct: 491 WEPPPEGWAKINVDGAFSMTDNTGGIGVIARDSEGKALLSSWEYLHRCADAEQVEILACY 550
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
G+ L E + +++E + + + LI S + + + ++Q
Sbjct: 551 EGMKLAAEWIRKPIILESDCITVIGRMTAEDEERSRWTFLIRSAKAVMRSLQEVRIQHRK 610
Query: 279 REANSCANWLA------AHC 292
RE N A+ LA AHC
Sbjct: 611 RECNRVAHELAQLAKRTAHC 630
>gi|224071753|ref|XP_002303568.1| predicted protein [Populus trichocarpa]
gi|222841000|gb|EEE78547.1| predicted protein [Populus trichocarpa]
Length = 161
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASE 213
P + W+PP + KLN++G S A GG++R G W +S G + + A+E
Sbjct: 87 PYRFVKWLPPALGYWKLNVDGDSLGNPEGADCGGVIRGSLGNWKAEFSVYFGHTANPAAE 146
Query: 214 LWALYHGLNL 223
LW ++ G+ L
Sbjct: 147 LWGIWQGIRL 156
>gi|125536577|gb|EAY83065.1| hypothetical protein OsI_38284 [Oryza sativa Indica Group]
Length = 290
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKN-LGTSNSLASELWALY 218
W P T W+KLN++GS + G G G ++RD SG I + L +++ +EL A
Sbjct: 153 WEKPSTGWMKLNVDGSFQASDGKGGIGAVLRDSSGNVIFAACGSMLVCGSAMEAELLACK 212
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLE 246
G+ + + F +VE + E ++
Sbjct: 213 EGIAMALQWTFLPFIVETDCLEVFNLIQ 240
>gi|145324879|ref|NP_001077686.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|334183106|ref|NP_001185161.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|98962175|gb|ABF59417.1| unknown protein [Arabidopsis thaliana]
gi|332194055|gb|AEE32176.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|332194056|gb|AEE32177.1| RNase H domain-containing protein [Arabidopsis thaliana]
Length = 138
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 185 AGGIVRDESGKWI-LGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVK 243
AG ++RDESG+++ G + TSN+L SE AL + W G RK+ E ++ E ++
Sbjct: 5 AGWVIRDESGQFVGAGQATGNHTSNALESEFQALLIAMQSCWSHGHRKIWFEGDNREVME 64
Query: 244 CLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLA 289
L S D I + + R +C+ I R+ N A+ LA
Sbjct: 65 ILNRRKSRFDTFN-WIRDVQAWKQRFQECRFTWINRKQNKPADILA 109
>gi|255557605|ref|XP_002519832.1| hypothetical protein RCOM_0864960 [Ricinus communis]
gi|223540878|gb|EEF42436.1| hypothetical protein RCOM_0864960 [Ricinus communis]
Length = 112
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 164 PTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELW 215
P NWV LN +G AG GG+ RD +GKW+ ++ ++G+ +++ +ELW
Sbjct: 5 PANWVALNTDGCCKSNGRYAGGGGLARDSNGKWVNRFTYSIGSRSTVEAELW 56
>gi|116309014|emb|CAH66131.1| OSIGBa0135L04.5 [Oryza sativa Indica Group]
Length = 611
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWALY 218
W P W+KLN++GS + G G G ++R+ G+ I L S L EL A
Sbjct: 450 WEKPNQGWMKLNVDGSFDASSGKGGIGAVLRNSQGEVIFSACGFLDRCSGPLEVELLACK 509
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
G+N+ + ++VE + EAVK + + ++ ++ + N + ++ I
Sbjct: 510 EGINMALQWTLLPIVVEMDCSEAVKLISSVSKGRSEVAFIVNDIKQLMFGNREIIIRKIH 569
Query: 279 REANSCANWLA--AHCE 293
N C++ LA CE
Sbjct: 570 HNQNGCSHILANKGRCE 586
>gi|255549678|ref|XP_002515890.1| nuclease, putative [Ricinus communis]
gi|223544795|gb|EEF46310.1| nuclease, putative [Ricinus communis]
Length = 167
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 175 SSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLV 234
+++R + GG+++ +G ++ + N+L +ELWA+ G L W++ +R+ +
Sbjct: 8 AATRLRVFVWLGGLLQRRAGLLLILMGR---VCNALEAELWAVIKGPKLAWDKEYRRENL 64
Query: 235 ECNSHEAVKCLELPASFLDPNRA-LILSCREYLCRNWDCKLQLILREAN-SCANWLAAHC 292
+S + L + D + L+ CR L + W ++ + RE + + A++LA
Sbjct: 65 AVDSLLVAEWLAKDSEVCDEFHSNLVFICRRLLNQAWHVNVKHVYRECDMAAADFLANLT 124
Query: 293 ENQPLGSLAVFDTPPYALAPIFQKDSTGI 321
NQ G + ++ PP + P Q D+ +
Sbjct: 125 MNQARG-VVLWCAPPAGIEPFLQMDAASV 152
>gi|255562334|ref|XP_002522174.1| hypothetical protein RCOM_0693780 [Ricinus communis]
gi|223538612|gb|EEF40215.1| hypothetical protein RCOM_0693780 [Ricinus communis]
Length = 103
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 117 SEKIKFKISSARPLSKG-KLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGS 175
S+ I +S AR ++ K+ N + G E R + W P N ++ +G
Sbjct: 4 SDPIIVILSKARHFNEASKMYNKV------KGVESTRRVERLVGWNRPSVNCFIIDTDGF 57
Query: 176 SSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGL 221
GI+ D G WI + LG+ NS+ +ELW + HGL
Sbjct: 58 VKENGIITATSGIIHDYCGAWICQFMTRLGSCNSVLAELWGMLHGL 103
>gi|351722181|ref|NP_001237235.1| uncharacterized protein LOC100306081 [Glycine max]
gi|255627473|gb|ACU14081.1| unknown [Glycine max]
Length = 113
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W P + KLN +GS S + A AGG++RD G IL +S N+G +++ELWA
Sbjct: 51 WKHPLCDHFKLNCDGSKSGS--IAAAGGLLRDHMGNVILSFSTNIGNCFVISAELWAFLI 108
Query: 220 GLNL 223
G+ +
Sbjct: 109 GVKI 112
>gi|255552547|ref|XP_002517317.1| hypothetical protein RCOM_1636500 [Ricinus communis]
gi|223543580|gb|EEF45110.1| hypothetical protein RCOM_1636500 [Ricinus communis]
Length = 136
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 154 PNSRIC-WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS 212
P SR+ W P +KLN + +A A ++ D+ G WI+G+S+ +G+ +
Sbjct: 62 PRSRVTRWECPNFGSIKLNSDKGLRNNIATASA--LLHDDKGNWIVGFSQKIGSCLVFEA 119
Query: 213 ELWALYHGLNLVWERGF 229
++W L+ GL L W GF
Sbjct: 120 KMWGLFTGLQLAWSLGF 136
>gi|124359510|gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LASELWALYHGLNLVWERG 228
LN++GS AG GGI R+ G ++ GYS + S L +EL AL+ GL + E G
Sbjct: 1141 LNVDGSCLGTPIRAGFGGIFRNNVGGYLSGYSGFISESTDILLAELTALHQGLIMAAEMG 1200
Query: 229 FRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWL 288
++ +S + + S LI ++ L + + + RE N CA++L
Sbjct: 1201 IEELACYSDSLLTINLITRTTSKYHTYAVLIQDIKDLLSAH-NFSVYHCFREGNQCADYL 1259
Query: 289 A 289
A
Sbjct: 1260 A 1260
>gi|15217749|ref|NP_174108.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|12320885|gb|AAG50576.1|AC079280_7 hypothetical protein [Arabidopsis thaliana]
gi|332192765|gb|AEE30886.1| RNase H domain-containing protein [Arabidopsis thaliana]
Length = 213
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 60/145 (41%), Gaps = 18/145 (12%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL-GYSKNLGTSNSLASELWALY 218
W P W+K N +GS + AG +VRD +G ++L G + N+L SE+ AL
Sbjct: 52 WRRPERGWIKCNFDGSFVNGDVKSKAGWVVRDSNGSYLLAGQAIGRKVDNALESEIQALI 111
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL-CRNWDCKLQLI 277
+ W G+++V C E L LI + Y NW +
Sbjct: 112 ISMQHCWSHGYKRV-----------CFEGDNKMLFD---LINGSKVYFGVHNWIRDIHWW 157
Query: 278 LREANSCA-NWLAAHCENQPLGSLA 301
LR+ S NW+ H N P LA
Sbjct: 158 LRKFESIHFNWIRRH-HNTPADILA 181
>gi|297822017|ref|XP_002878891.1| hypothetical protein ARALYDRAFT_901248 [Arabidopsis lyrata subsp.
lyrata]
gi|297324730|gb|EFH55150.1| hypothetical protein ARALYDRAFT_901248 [Arabidopsis lyrata subsp.
lyrata]
Length = 202
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG--TSNSLASELWAL 217
W PP W+K N +GS + A +G I+RD + + +G + +G ++++ EL +L
Sbjct: 41 WQPPAIGWLKCNYDGSFVSSNLPAKSGWIIRDHN-RVYMGSGQAMGGVLNDAMECELQSL 99
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCL 245
+ W RG+++V E ++ E VK +
Sbjct: 100 IIAMQHCWTRGYQRVCFEGDNQEVVKLI 127
>gi|113205274|gb|ABI34321.1| RNase H family protein [Solanum demissum]
Length = 945
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 27/171 (15%)
Query: 123 KISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGS 182
K+ S RP K K+V+ W P N VK+N +GS S G+
Sbjct: 732 KVESLRPYPKWKIVH----------------------WNTPNINCVKINTDGSFS--SGN 767
Query: 183 AGAGGIVRDESGKWILGYS-KNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEA 241
AG G IVRD + + I+ +S + +SN+LA L A + G+ ++GF +E +S
Sbjct: 768 AGLGWIVRDHTRRMIMAFSIPSSCSSNNLAEALAARF-GILWCLQQGFHNCYLELDSKLV 826
Query: 242 VKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLAAHC 292
V + + + ++ + + + +C++ REAN A+ LA H
Sbjct: 827 VDMVRNGQATNLKIKGVVEDIIQVVAKM-NCEVNHCYREANQVADALAKHA 876
>gi|218186266|gb|EEC68693.1| hypothetical protein OsI_37162 [Oryza sativa Indica Group]
Length = 1283
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 163 PPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWALYHGL 221
P W+KLN++GS +G G I+RD SG + K+L + N+L +E+ A GL
Sbjct: 1184 PRLGWMKLNVDGSFDADRGKGGISMILRDNSGSTVFAACKSLDSCKNALEAEIRACMEGL 1243
Query: 222 NLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRAL 258
L + R +L+E + C+ L + NR L
Sbjct: 1244 ILALQWTMRPILIETD------CVSLVNLLKEGNRDL 1274
>gi|255555578|ref|XP_002518825.1| conserved hypothetical protein [Ricinus communis]
gi|223541998|gb|EEF43543.1| conserved hypothetical protein [Ricinus communis]
Length = 109
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 30/131 (22%)
Query: 177 SRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVEC 236
S G A AG ++ G+W G+S N+G + +ELW +Y G +C
Sbjct: 5 SATSGQAKAGAVICYHLGRWWGGFSMNIGACSITHAELWDVYKG-------------SDC 51
Query: 237 NSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQP 296
++H LI S R L + W K+ + +E N A+ +AA P
Sbjct: 52 STHA----------------LLIRSIRGLLAQAWQVKVYHVYQEYNFVADRMAAMANELP 95
Query: 297 LGSLAVFDTPP 307
LG F PP
Sbjct: 96 LG-FHFFQEPP 105
>gi|9294089|dbj|BAB01941.1| unnamed protein product [Arabidopsis thaliana]
Length = 228
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 140 IDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKW-IL 198
ID+ ++ W P ++VK N + S+ + AG I+RD +G +
Sbjct: 85 IDSTTNIQTRQVQSRTHHSAWTRPKEDFVKCNFDCKFSKNNNVSQAGWIIRDSNGVFQAA 144
Query: 199 GYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVE 235
G SK S S+ +EL AL + VW +G++KV+ E
Sbjct: 145 GRSKGQHCSMSMEAELQALVMAMQHVWSKGYKKVIFE 181
>gi|62733196|gb|AAX95313.1| hypothetical protein [Oryza sativa Japonica Group]
gi|77550455|gb|ABA93252.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1063
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSN-SLASELWALY 218
W+ P W+KLNI+GS + G G I R+ +G I + N +L +EL AL
Sbjct: 902 WIKPQPGWMKLNIDGSFDASLNQGGIGVIPRNSTGSVIFSACGFIDRCNCALEAELLALK 961
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
+ L + +E + EAV ++ S LI + N + +++ +L
Sbjct: 962 ESIILALHWTLLPICIETDCLEAVNLIQSARSVRSELAHLIRDIGALISGNREMQIKKVL 1021
Query: 279 REANSCANWLA 289
R N+ +++LA
Sbjct: 1022 RCQNTVSHFLA 1032
>gi|242082343|ref|XP_002445940.1| hypothetical protein SORBIDRAFT_07g028410 [Sorghum bicolor]
gi|241942290|gb|EES15435.1| hypothetical protein SORBIDRAFT_07g028410 [Sorghum bicolor]
Length = 289
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 134 KLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDES 193
K V+++ D P I R + CW+PP T+ +K+N +G+ +A+ G IVRD +
Sbjct: 101 KYVDTLHTQDRP-----IKRKSGISCWVPPTTDVLKINFDGAFLKAEKKGAWGFIVRDHT 155
Query: 194 GKWILGYSKNLG-TSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLE 246
G ++ + + ++L++E A L + G ++++E +S V L+
Sbjct: 156 GASVVAGAGRINVVHDALSAESQACLAALYVAIIHGLSQIILETDSTTLVDALQ 209
>gi|62701897|gb|AAX92970.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|62733927|gb|AAX96036.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|77550044|gb|ABA92841.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 796
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL---GYSKNLGTSNSLASELWA 216
W P W+KLNI+GS + G G I+R+ +G I G+ + S++L +EL A
Sbjct: 635 WTKPQLGWMKLNIDGSFDASLNQGGIGAILRNNAGSVIFSACGFIER--CSSALEAELLA 692
Query: 217 LYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQL 276
G+ + + + +E +S EAV + + LI E + N + ++
Sbjct: 693 CKEGIIMALQWTLLPICIETDSLEAVNLNQSANNVRSELAHLIREIGELISGNREITIKK 752
Query: 277 ILREANSCANWLA 289
+LR N+ +++LA
Sbjct: 753 MLRCQNTVSHFLA 765
>gi|218198858|gb|EEC81285.1| hypothetical protein OsI_24396 [Oryza sativa Indica Group]
Length = 152
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 168 VKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LASELWALYHGLNLVWE 226
+K+NI+GS G G G + RD +G+ S++L NS L +EL A GL L +
Sbjct: 1 MKVNIDGSYDSRNGIGGIGLVTRDCTGRAFFASSRHLERCNSALEAELQACREGLILGLQ 60
Query: 227 RGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCAN 286
+++E + EA+ ++ + ++ ++ + N + KL R N ++
Sbjct: 61 YTLLPIVLETDCLEAMLLIQSTEKVMSTEAFIVREIKDLVQGNREIKLNKAQRSQNRISH 120
Query: 287 WLA--AHCEN 294
WLA A CE+
Sbjct: 121 WLANKARCEH 130
>gi|15225803|ref|NP_180874.1| glycosyl hydrolase and polygalacturonase domain-containing protein
[Arabidopsis thaliana]
gi|2924778|gb|AAC04907.1| putative polygalacturonase [Arabidopsis thaliana]
gi|330253698|gb|AEC08792.1| glycosyl hydrolase and polygalacturonase domain-containing protein
[Arabidopsis thaliana]
Length = 664
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKW-ILGYSKNLGTSNSL 210
H PN W P WVK N++GS G IVRD +G++ G + N+L
Sbjct: 499 HIPN----WRRPTNGWVKCNVDGSFINGNIPGKGGWIVRDHNGRYEFAGQAIGNCIDNAL 554
Query: 211 ASELWALYHGLNLVWERGFRKVLVECNSHE 240
E AL + W +G+R++ E ++ E
Sbjct: 555 ECEFQALLMAMQHCWSKGYRRICFEGDNKE 584
>gi|242062882|ref|XP_002452730.1| hypothetical protein SORBIDRAFT_04g031460 [Sorghum bicolor]
gi|241932561|gb|EES05706.1| hypothetical protein SORBIDRAFT_04g031460 [Sorghum bicolor]
Length = 273
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNSLAS 212
P R W PP N++K+N + + G G +VRD G+ IL + N+ ++L++
Sbjct: 103 PAPRRLWKPPDENFLKINFDAGFRKKDGMGTCGFVVRDHLGEAILAGAANVKPVRDALST 162
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL 266
E A L V G ++ +E + + + L P L S RE L
Sbjct: 163 EAMACLFALESVEAVGISRIELETDCSQLQDAILSQRRDLAPGGVLFRSIRELL 216
>gi|224118590|ref|XP_002317858.1| predicted protein [Populus trichocarpa]
gi|222858531|gb|EEE96078.1| predicted protein [Populus trichocarpa]
Length = 1052
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 256 RALILSCREYLCRNWDCKLQLILREANSCANW---LAAHCENQPLGSLAVFDTPPYALAP 312
RALI RE L R+W +++ REAN CA++ LA C+N L ++D PP L
Sbjct: 982 RALIFEIRELLRRDWTVRIEHTFREANFCADFMAKLATSCDN----GLMIWDEPPQGLQQ 1037
Query: 313 IFQKD 317
+ D
Sbjct: 1038 LLLAD 1042
>gi|49823504|gb|AAT68735.1| hypothetical protein At2g15045 [Arabidopsis thaliana]
gi|55740561|gb|AAV63873.1| hypothetical protein At2g15045 [Arabidopsis thaliana]
Length = 112
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 217 LYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQL 276
+Y+GL L WE+ +V +E ++ V L S P L+ C ++ ++W ++
Sbjct: 1 MYYGLYLAWEKKASRVELEVDTEMVVGFLRTRVSESHPLSFLVRLCYGFISKDWIVRIVH 60
Query: 277 ILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
+ REAN A+ LA + + + FD+ P + I D++G +R
Sbjct: 61 VYREANRLADGLANYAFSLSV-CFDYFDSLPDCVCSISAADTSGATSSR 108
>gi|77553853|gb|ABA96649.1| hypothetical protein LOC_Os12g09520 [Oryza sativa Japonica Group]
Length = 125
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 132 KGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRD 191
KGK V+ + PP + + W PP W K+N++G+ + G G G I+RD
Sbjct: 6 KGKQVDQQHN-QAPPRSVTNQVKENNMRWRAPPVGWAKINVDGAFNPEDGLGGLGIIIRD 64
Query: 192 ESGKWILGYSKNLGT-SNSLASELWALYHGLNLVWE 226
SGK +L + + S++L SEL A GL L E
Sbjct: 65 SSGKVLLSSWRFIRRCSSALESELLACLEGLKLAVE 100
>gi|242052151|ref|XP_002455221.1| hypothetical protein SORBIDRAFT_03g006485 [Sorghum bicolor]
gi|241927196|gb|EES00341.1| hypothetical protein SORBIDRAFT_03g006485 [Sorghum bicolor]
Length = 186
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 145 PPGFEKIHRPNSRIC--WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSK 202
PP K R +C W P + W+K N++ S + + G ++RD G+ G S
Sbjct: 10 PP---KKQRLTPAVCQQWRKPDSGWIKCNVDASFNDGDRTGATGMVLRDHDGQ-ACGVSA 65
Query: 203 NL--GTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLE 246
+ N+LA+E A G+ ERG RK+LVE + V E
Sbjct: 66 RWYEHSLNALATEAMACRDGMQFARERGVRKLLVETDCQVLVNLWE 111
>gi|255563806|ref|XP_002522904.1| hypothetical protein RCOM_0863820 [Ricinus communis]
gi|223537889|gb|EEF39504.1| hypothetical protein RCOM_0863820 [Ricinus communis]
Length = 98
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 228 GFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANW 287
GFRK+LVE ++ V L A N AL + L R+WD +L I REAN CA+
Sbjct: 2 GFRKLLVEVDNECLVHILHNQAPATLRNLALFNEAKRLLSRDWDVQLSHIYREANGCADK 61
Query: 288 LAAHCENQPLGSLAVFDTPPYALAPIFQKD 317
A P+G + PP + + +D
Sbjct: 62 FANLGYGLPVGC-HILQGPPDIVKDLIMQD 90
>gi|255585163|ref|XP_002533286.1| conserved hypothetical protein [Ricinus communis]
gi|223526889|gb|EEF29097.1| conserved hypothetical protein [Ricinus communis]
Length = 107
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 226 ERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCA 285
++GFR+V +E +S E V+ + S + +L+ + + R+WD +L+EAN CA
Sbjct: 40 QKGFRRVDLELDSLEVVRAISADLSLIGNCGSLLAQIKTLMSRSWDVSCAHVLKEANKCA 99
Query: 286 NWLA 289
NWLA
Sbjct: 100 NWLA 103
>gi|87241334|gb|ABD33192.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 151
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNSLA 211
+P+ + W + V LN++GS + AG GGI R+ + ++ G+S L TS+ L
Sbjct: 35 QPDRLVRWNNNNFDCVVLNVDGSCLGSPIRAGYGGIFRNSADLFLSGFSGYLASTSDILM 94
Query: 212 SELWALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
+EL A++HG+ L + G ++ +S +++ L
Sbjct: 95 TELTAIHHGMLLAMDLGIDDMVCHSDSLLSIQLL 128
>gi|55771332|dbj|BAD72257.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55771341|dbj|BAD72266.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 250
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 103 QGQKSNSSDLFTGRS--EKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICW 160
G + L G+S E + S + KGK P E+ H + + W
Sbjct: 64 HGASAVGYGLMHGQSLWESLFMSTSQGKVDDKGKKPVMQSRLSSPDNHERNH--TTTMGW 121
Query: 161 MPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSL-ASELWALYH 219
PPP WVK N++GS + +A AG ++RD +G +L + + S +E A +
Sbjct: 122 TPPPMGWVKANVDGSFIQCSEAASAGIVIRDHTGSVLLTSWRIISHCGSAEEAEATACWE 181
Query: 220 GLNLVWERGFRKVLVECN 237
G+NL E + +++E +
Sbjct: 182 GVNLAAEWVKKPLILETD 199
>gi|357496179|ref|XP_003618378.1| hypothetical protein MTR_6g008810 [Medicago truncatula]
gi|355493393|gb|AES74596.1| hypothetical protein MTR_6g008810 [Medicago truncatula]
Length = 78
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 162 PPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGL 221
PPP +KLNI+GS R G G GG+V + +G WI +S ++L +EL + G+
Sbjct: 8 PPPEGTLKLNIDGSFFRDLGCLGVGGVVHNHNGDWIASFSHYEVGGDALLAELRVIQIGV 67
Query: 222 NLVWER 227
+ R
Sbjct: 68 DFCSLR 73
>gi|242042287|ref|XP_002468538.1| hypothetical protein SORBIDRAFT_01g047585 [Sorghum bicolor]
gi|241922392|gb|EER95536.1| hypothetical protein SORBIDRAFT_01g047585 [Sorghum bicolor]
Length = 491
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSL-----ASEL 214
W PPP + K+NI+G+ + + G G ++RD G + + N+ + S+ + L
Sbjct: 325 WKPPPIDIYKINIDGAFYQETRTGGWGFVIRDTCGDVLAAGAGNIRYAASVLQTEAMAAL 384
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNR----ALILSCREYLCRNW 270
+ H NL G +++E ++ L L S ++ +R +LI R+++ ++
Sbjct: 385 QEIQHAANL----GMMHIILETDA----TTLALALSSMERDRSTIGSLIHQIRDHMLHDF 436
Query: 271 D-CKLQLILREANSCANWLAAH--CENQPLGSLAVFDTPPYAL 310
+ CK+ R N A+ LA+H C P S+ P + +
Sbjct: 437 NSCKVSACDRTCNRIADALASHGACVLTPECSIFFNQAPEFVI 479
>gi|116830343|gb|ABK28129.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 88/222 (39%), Gaps = 17/222 (7%)
Query: 106 KSNSSDLFTGRSEKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPT 165
KS + +F K + + A +K L N+M + + P+ W PP
Sbjct: 53 KSGNDLVFNHTRTKFQTTVEMALNDTKEWLDNTMTNEQ--QNGNRNADPSRNTKWSPPGR 110
Query: 166 NWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTSNSLASELWALYHGLNLV 224
+ +K N + S +G G I+R+ G I G K G + +E L +
Sbjct: 111 DKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLIWAIQAS 170
Query: 225 WERGFRKVLVECNSHEAVKCLELPAS------FLDPNRALILSCREYLCRNWDCKLQLIL 278
+ G +KV+ E ++ + + +S FLD ++ I S +
Sbjct: 171 YGFGHKKVIFEGDNQTITRMINTKSSNPRLQHFLDTIQSWIPSFES-------IEFSFKH 223
Query: 279 REANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTG 320
RE N CA++LA + ++F + PY L+P D +G
Sbjct: 224 REQNGCADFLAKQAIKENT-QWSLFHSCPYFLSPYVNNDYSG 264
>gi|242041497|ref|XP_002468143.1| hypothetical protein SORBIDRAFT_01g040370 [Sorghum bicolor]
gi|241921997|gb|EER95141.1| hypothetical protein SORBIDRAFT_01g040370 [Sorghum bicolor]
Length = 289
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 159 CWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNSLASELWAL 217
CW+PP T+ +K+N +G+ + Q G IVRD +G ++ + + ++L++E A
Sbjct: 121 CWVPPTTDVLKINFDGAFLKTQKKGAWGFIVRDHTGASVVAGAGRINVVHDALSAESQAC 180
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLE 246
L + + G ++++E +S V L+
Sbjct: 181 LAALYVAIDHGLSQIILETDSTTLVDALQ 209
>gi|242048142|ref|XP_002461817.1| hypothetical protein SORBIDRAFT_02g008730 [Sorghum bicolor]
gi|241925194|gb|EER98338.1| hypothetical protein SORBIDRAFT_02g008730 [Sorghum bicolor]
Length = 404
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNSLASELWALY 218
W PPP++ +K+N +G+ S+ + G G I RD G +L + + ++L++E+
Sbjct: 235 WTPPPSDILKINFDGAFSQEERKGGWGFIARDHDGLAMLAGAGRINFLHDALSAEIHGCL 294
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNW-DCKLQLI 277
L+ +++G ++E +S V+ L+ LI+ ++ N+ +
Sbjct: 295 AALSATFDQGMSHFILESDSTVLVRALQSNDYDFSAAGVLIIEATFFISMNFVHVDVVHA 354
Query: 278 LREANSCANWLA 289
R NSCA+ LA
Sbjct: 355 PRSCNSCAHELA 366
>gi|224147290|ref|XP_002336448.1| predicted protein [Populus trichocarpa]
gi|222835041|gb|EEE73490.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+ W PP TN K N++GSS G +G GG++R+ +G + +S ++G +S +EL A+
Sbjct: 208 VVWSPPITNSFKWNVDGSSLGKSGPSGIGGVLRNHNGILLGIFSLSVGILDSNVAELKAV 267
Query: 218 YHGLNLVWER---GFRKVLVECNSHEAVKCLELP 248
+ L + +++EC+S ++ + P
Sbjct: 268 VKAIELSASNCRLHHKHIIIECDSATVIRWMNNP 301
>gi|242079463|ref|XP_002444500.1| hypothetical protein SORBIDRAFT_07g022916 [Sorghum bicolor]
gi|241940850|gb|EES13995.1| hypothetical protein SORBIDRAFT_07g022916 [Sorghum bicolor]
Length = 317
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 2/145 (1%)
Query: 147 GFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG- 205
G + + P+ R W PP N++K+N + + G G +VRD G+ +L + N+
Sbjct: 133 GNKPTYLPSPRRLWKPPDENFLKINFDAGFRKTDGMGTCGFVVRDHLGEAVLAGAANVKP 192
Query: 206 TSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREY 265
++L++E L V G ++ +E + + + P L S RE
Sbjct: 193 VRDALSAEAMGCLFALESVEAVGISRIELETDCSQLQDAIMSQRRDPAPGGVLFRSIREL 252
Query: 266 LCRNWDC-KLQLILREANSCANWLA 289
L + C K+ I R NS A+ +A
Sbjct: 253 LQDRFVCNKVIAIPRSCNSSAHEIA 277
>gi|242068343|ref|XP_002449448.1| hypothetical protein SORBIDRAFT_05g012526 [Sorghum bicolor]
gi|241935291|gb|EES08436.1| hypothetical protein SORBIDRAFT_05g012526 [Sorghum bicolor]
Length = 171
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL-GYSKNLGTSNSLASELWALY 218
W PPT +K+N++G+ + G G ++RDE G I G + + NSL +EL A
Sbjct: 6 WEKPPTGLLKVNVDGAFRDLDKNGGWGYVIRDEEGVVIQSGLGRIMNVGNSLYTELVACL 65
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNW-DCKLQLI 277
G V G + ++E ++ V ++ L ++ + L + + +
Sbjct: 66 EGAKAVLSLGASQFIMETDAQHVVWAMQGDDFRLATVGGIVHELKVLLVESLSSVRFAHV 125
Query: 278 LREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQ 323
E N + LA+ +++ + + V P+ + + D +V+
Sbjct: 126 PHECNKVTHELASLGQSRNVFAPLVLAGVPHCIMDMVSGDLADVVE 171
>gi|255566907|ref|XP_002524436.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223536224|gb|EEF37876.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 101
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 212 SELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWD 271
+E WA GL L W G+R+++VE +S L + ++ LI +CRE + ++W+
Sbjct: 2 AECWAACEGLKLAWNMGYRELIVEVDSKLVAGWLNADQTCMNDCSNLIYACRELIRKDWN 61
Query: 272 CKLQLILREANSCANWLA 289
++ + RE N A+ LA
Sbjct: 62 VDVRHVFREGNMIADSLA 79
>gi|124360838|gb|ABN08810.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 113
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 162 PPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGL 221
P T ++ ++G+SS AG G + +DE W G+ K G N+ +ELW Y GL
Sbjct: 33 PTHTFFLAPPLDGASSGGV-QAGCGSLFQDEHEIWSCGFFKYFGRCNTYVAELWGAYEGL 91
Query: 222 NLVWERGFRKVLVECN 237
+ +RG+ +V N
Sbjct: 92 EIALDRGYFRVEYNVN 107
>gi|242071847|ref|XP_002451200.1| hypothetical protein SORBIDRAFT_05g025720 [Sorghum bicolor]
gi|241937043|gb|EES10188.1| hypothetical protein SORBIDRAFT_05g025720 [Sorghum bicolor]
Length = 227
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 3/181 (1%)
Query: 112 LFTGRSEKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRP-NSRICWMPPPTNWVKL 170
L+TGR+ + + S P + + V+ +++ + RP + W P W K+
Sbjct: 15 LWTGRNTRGHGR-KSWEPGATARFVSKLLEDLASLKLAPVMRPVPAEAKWEKPSLGWFKI 73
Query: 171 NIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASELWALYHGLNLVWERGF 229
N + + S AG ++R+E+ G ++ L ++L +E A GL LV E G
Sbjct: 74 NTDAGFDQESNSGSAGVVIRNEASLVAGGSARWLENVPDALTAEAMAAREGLELVVELGL 133
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLA 289
+V++E + E K L S L E + ++ + R+ANS AN+ A
Sbjct: 134 DRVILEVDCQELSKLLLSEYSISSCIGGLCFDIIELGKMFSEFCIRWVRRDANSVANFCA 193
Query: 290 A 290
+
Sbjct: 194 S 194
>gi|357444365|ref|XP_003592460.1| hypothetical protein MTR_1g105210 [Medicago truncatula]
gi|355481508|gb|AES62711.1| hypothetical protein MTR_1g105210 [Medicago truncatula]
Length = 104
Score = 47.0 bits (110), Expect = 0.013, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 181 GSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLN 222
G + GG +R+ G WI G+ +N+G SN L +EL A+YHGL+
Sbjct: 38 GVSSFGGFLRNGDGAWIHGFVENIGFSNILHAELLAIYHGLH 79
>gi|242052879|ref|XP_002455585.1| hypothetical protein SORBIDRAFT_03g013440 [Sorghum bicolor]
gi|241927560|gb|EES00705.1| hypothetical protein SORBIDRAFT_03g013440 [Sorghum bicolor]
Length = 149
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWALY 218
W PP N++K+N++ + + I+ D G +L ++NLG +++ +E WA
Sbjct: 42 WSLPPLNYLKINLDRAYQVDSKNGAWDFIIEDHEGSTVLAGARNLGVVHDAVLAETWACK 101
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL 266
L++ G +VL+E +S + L + L L RE L
Sbjct: 102 QALDVAVHFGISQVLIETDSSQLKDALSSSSGDLAIGGGLFKDIREML 149
>gi|255576625|ref|XP_002529202.1| conserved hypothetical protein [Ricinus communis]
gi|223531320|gb|EEF33158.1| conserved hypothetical protein [Ricinus communis]
Length = 81
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
I W PPP++WV LN++G G A +GG +R+ + +WI G+ +
Sbjct: 3 IGWEPPPSDWVNLNVDGGVK--DGLATSGGPLRNSACQWISGFMQ--------------- 45
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPN 255
+ W G R V+VE +S EA+ ++ + PN
Sbjct: 46 ----KIAWSLGCRHVMVEFDSKEALAMIKGQDNGSKPN 79
>gi|297800532|ref|XP_002868150.1| hypothetical protein ARALYDRAFT_915138 [Arabidopsis lyrata subsp.
lyrata]
gi|297313986|gb|EFH44409.1| hypothetical protein ARALYDRAFT_915138 [Arabidopsis lyrata subsp.
lyrata]
Length = 109
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 147 GFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL-GYSKNLG 205
G++KI + W PPP W+K N + + + ++RD + K +L G +K
Sbjct: 3 GWKKILIMDRNSQWSPPPDGWLKCNFDSGFQQGRSFTNTCWLIRDSNWKVLLTGCAKLCS 62
Query: 206 TSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAV 242
+ L +E H L +VW G R+V E ++ E +
Sbjct: 63 AMSPLHAEALGFLHVLQIVWAHGMRQVWFEGDNKELI 99
>gi|357469797|ref|XP_003605183.1| Cytochrome P450 [Medicago truncatula]
gi|355506238|gb|AES87380.1| Cytochrome P450 [Medicago truncatula]
Length = 348
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 21/166 (12%)
Query: 144 CPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILG---- 199
C P + PN + W+ P K N++ S S+AQ G +RDE G+++L
Sbjct: 190 CHPILQHPATPNE-LKWIKPSPGRFKCNVDASFSQAQNRVDIGVCIRDEEGRYVLAKTEW 248
Query: 200 ----YSKNLGTSNSLASELWALYHGLNLVWERGFRKVLV--ECNSHEAVKCLELPASFLD 253
+ +LG + L S ++ W R + +V E +S V L +
Sbjct: 249 MSPLFDVDLGEALGLLSAMY---------WVRNLQLGIVDFELDSKIVVDSLYGSKIGVS 299
Query: 254 PNRALILSCREYLCRNW-DCKLQLILREANSCANWLAAHCENQPLG 298
A+I CR L + ++ I R+AN WL + +G
Sbjct: 300 NFSAVINDCRRLLASDLVTSDVRFIRRQANEVGQWLCVMAREEAVG 345
>gi|413925904|gb|AFW65836.1| hypothetical protein ZEAMMB73_825751 [Zea mays]
Length = 279
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLAS 212
P + W PPP + K+N +GS G G G I+R G ++ + L G S++L +
Sbjct: 108 PPMNLKWQPPPAGFYKINCDGSYLAKSGLGGWGCIIRGHDGSFLAAGAGTLTGISSTLHA 167
Query: 213 ELWALYHGLNLVWERGFRKVLVECNS 238
E A GL L G + V++E ++
Sbjct: 168 ESVACMKGLELAVFLGMQNVMIETDA 193
>gi|218195450|gb|EEC77877.1| hypothetical protein OsI_17166 [Oryza sativa Indica Group]
Length = 470
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWA 216
R W PPP W+K N G SAG GG+ +E G + +LG + + + A
Sbjct: 240 RKTWSPPPKGWIKFNFHGIGGSKDRSAGMGGVFHNEDGVLSF-FIGSLGNMDQTVASIGA 298
Query: 217 LYHGLNLVWE--RGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL 266
+ GL ++ E +K++VE + ++ + P RA R YL
Sbjct: 299 IELGLKVMLEYHEPVKKLIVEGDDLTVIRWFNRVSH--PPARAHDSFLRSYL 348
>gi|255544357|ref|XP_002513240.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223547614|gb|EEF49108.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 119
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 211 ASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNW 270
+EL ++ GL L W G K+ VE +S V+ L+ + N LI + R+YL R W
Sbjct: 10 TAELSGVHKGLALAWHYGVLKLKVEIDSLYVVQLLKGIKVVCNYNGLLISNIRQYLNREW 69
Query: 271 DCKLQLILREANSCANWLAAHCENQPLG 298
+ + I RE+N A+ LA N PLG
Sbjct: 70 EVSIVHIYRESNFAADALAFLAANFPLG 97
>gi|357485051|ref|XP_003612813.1| hypothetical protein MTR_5g029350 [Medicago truncatula]
gi|355514148|gb|AES95771.1| hypothetical protein MTR_5g029350 [Medicago truncatula]
Length = 181
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 18/140 (12%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESG-KWILGYSKNLGTSNSL 210
H P W+PPP + +KLNI S GAG +V ++ ++++ + NL
Sbjct: 43 HSPRLLAYWIPPPKDKLKLNINDSFLEDFECLGAGDVVCNKMEIRYLIFLTMNLEI---- 98
Query: 211 ASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASF-LDPNRALILSCREYLCRN 269
V ++G+ ++ E + EAV+ + + L + IL R+ L N
Sbjct: 99 ------------FVSKKGYDNIICESDCLEAVELIIVGRDHALHTYASEILHIRDVLHEN 146
Query: 270 WDCKLQLILREANSCANWLA 289
+ L +LRE N CA ++
Sbjct: 147 GNATLVYVLREQNMCAGFIV 166
>gi|22711564|gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
Length = 1888
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNSLASELWALY 218
W+ P +KLN++GS + G G G ++R+ +G+ I ++ S++L +EL A
Sbjct: 1728 WLKPLPGSMKLNVDGSFQESDGKGGIGAVLRNCTGEVIFAACGHVDCCSSALETELLACR 1787
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRA------LILSCREYLCRNWDC 272
GL L + +++E + CL + F D A LI L N D
Sbjct: 1788 DGLALALQWTLLPIVIETD------CLAMIHLFRDATGAKSELAFLIREIDSLLVGNRDI 1841
Query: 273 KLQLILREANSCANWLA 289
LR N +++LA
Sbjct: 1842 SFSKCLRSQNHISHYLA 1858
>gi|38346707|emb|CAE04857.2| OSJNBa0086O06.5 [Oryza sativa Japonica Group]
Length = 509
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 149 EKIHR--PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT 206
E +HR R W PPP W+K N G SAG GG+ +E G + +LG
Sbjct: 269 EFLHRIPAMHRKTWSPPPKGWIKFNFHGIGGSKDRSAGMGGVFHNEDGVLSF-FIGSLGN 327
Query: 207 SNSLASELWALYHGLNLVWE--RGFRKVLVECNSHEAVK 243
+ + + A+ GL ++ E +K++VE + ++
Sbjct: 328 VDQTVASIGAIELGLKVMLEYHEPVKKLIVEGDDLTVIR 366
>gi|242069135|ref|XP_002449844.1| hypothetical protein SORBIDRAFT_05g024306 [Sorghum bicolor]
gi|241935687|gb|EES08832.1| hypothetical protein SORBIDRAFT_05g024306 [Sorghum bicolor]
Length = 249
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWALY 218
W PP +K+N +GS + G I+RD G +L + LG+ ++L +E
Sbjct: 78 WKAPPPGQLKINSDGSFIQETLQGSWGFIIRDHEGDGVLAGAGRLGSIPDALTTEAATCA 137
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC-KLQLI 277
L + G V VE +S + L+ + L L++ R LC ++ C K+ I
Sbjct: 138 QALQAATDYGISHVQVEVDSTALQQALQSSSMDLVTCGMLLIDTRSLLCEHFVCGKILSI 197
Query: 278 LREANSCANWLA 289
R N A+ LA
Sbjct: 198 PRACNGLAHNLA 209
>gi|222629445|gb|EEE61577.1| hypothetical protein OsJ_15952 [Oryza sativa Japonica Group]
Length = 470
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWA 216
R W PPP W+K N G SAG GG+ +E G + +LG + + + A
Sbjct: 240 RKTWSPPPKGWIKFNFHGIGGSKDRSAGMGGVFHNEDGVLSF-FIGSLGNVDQTVASIGA 298
Query: 217 LYHGLNLVWE--RGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL 266
+ GL ++ E +K++VE + ++ + P RA R YL
Sbjct: 299 IELGLKVMLEYHEPVKKLIVEGDDLTVIRWFNRVSH--PPARAHDSFLRSYL 348
>gi|357129044|ref|XP_003566178.1| PREDICTED: uncharacterized protein LOC100833675 [Brachypodium
distachyon]
Length = 230
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 150 KIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSN 208
++ +P SR W PPP K+N++ +R+ + RDE G+++ S + G ++
Sbjct: 96 RLAQPTSR--WSPPPAGLCKINVDAGVARSGAEGSCAAVCRDECGRFMGASSITIEGMTD 153
Query: 209 SLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLE 246
E A GL+L + KV V + +K L+
Sbjct: 154 PTVLEALAYNEGLSLALDLNISKVCVASDCLTVIKSLQ 191
>gi|110288692|gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1853
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNSLASELWALY 218
W+ P +KLN++GS + G G G ++R+ +G+ I ++ S++L +EL A
Sbjct: 1693 WLKPLPGSMKLNVDGSFQESDGKGGIGAVLRNCTGEVIFAACGHVDCCSSALETELLACR 1752
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRA------LILSCREYLCRNWDC 272
GL L + +++E + CL + F D A LI L N D
Sbjct: 1753 DGLALALQWTLLPIVIETD------CLAMIHLFRDATGAKSELAFLIREIDSLLVGNRDI 1806
Query: 273 KLQLILREANSCANWLA 289
LR N +++LA
Sbjct: 1807 SFSKCLRSQNHISHYLA 1823
>gi|77555914|gb|ABA98710.1| hypothetical protein LOC_Os12g33140 [Oryza sativa Japonica Group]
gi|125579528|gb|EAZ20674.1| hypothetical protein OsJ_36289 [Oryza sativa Japonica Group]
Length = 215
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 13/137 (9%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNSLASELWALY 218
W P +KLN++GS + G G G ++R+ +G+ I ++ S++L +EL A
Sbjct: 55 WSKPLPGSMKLNVDGSFQESDGKGGIGAVLRNCTGEVIFAACGHVDRCSSALETELLACR 114
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRA------LILSCREYLCRNWDC 272
GL L + +++E + CL + F D A L+ L N D
Sbjct: 115 DGLALALQWTLLPIVIETD------CLAMIHLFRDATGAKSELAFLVREIDSLLVGNRDI 168
Query: 273 KLQLILREANSCANWLA 289
LR N +++LA
Sbjct: 169 SFSKCLRSQNHISHYLA 185
>gi|365874504|ref|ZP_09414037.1| ribonuclease HI [Thermanaerovibrio velox DSM 12556]
gi|363984591|gb|EHM10798.1| ribonuclease HI [Thermanaerovibrio velox DSM 12556]
Length = 145
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Query: 168 VKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWER 227
VK +G+S G AGAG ++ D+ G I Y LG + +E AL L V R
Sbjct: 2 VKGYFDGASRGNPGVAGAGALLVDDGGSVIWEYRGFLGHRTNNEAEYQALIALLEEVRRR 61
Query: 228 GFRKVLVECNSHEAVKCLELPASFLDPN-RALILSCREYLCRNWDCKLQLILREANSCAN 286
G R VLV +S + + P+ RAL RE LCR + + I RE N A+
Sbjct: 62 GIRSVLVMGDSQLVISQVTGKWKINMPHLRALASRVRE-LCRGLEVSFKWIPREENRQAD 120
Query: 287 WLA 289
L+
Sbjct: 121 RLS 123
>gi|125549569|gb|EAY95391.1| hypothetical protein OsI_17229 [Oryza sativa Indica Group]
Length = 172
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILG-YSKNLGTSNSLASELWALY 218
W PP+ W+KLN++G S + + G G I+R+ +G I Y ++L +E+ A
Sbjct: 13 WEKPPSGWMKLNVDG-SYQENNTGGIGAILRNSTGDVIFAVYGFVEQCQSALEAEILACK 71
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
G+ L + +++E + EA++ + + L+ + + + KL+ +
Sbjct: 72 EGIRLALQWTLLPIIIESDCAEAIQLILSEGKLRSAHTFLVREIQGMVKGAREMKLKKVN 131
Query: 279 REANSCANWLA--AHCEN 294
R N ++ LA CE+
Sbjct: 132 RNCNRISHVLANKGRCES 149
>gi|356557909|ref|XP_003547252.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 193
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 167 WVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWE 226
W K N +G+ G+AG G I ++E + + NLGT NSL EL ++ + L +
Sbjct: 48 WTKCNTDGAVKGNPGTAGCGDIFKNERTCVLGCFVLNLGTQNSLFVELTSVILAIGLTAK 107
Query: 227 RGFRKVLVECNSH-EAVKCLELP 248
+ + K+ +EC+S A LP
Sbjct: 108 KNWNKLWLECDSELTATSTTHLP 130
>gi|332322099|emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 113 FTGRSEKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNI 172
F G+ EK +I S N+ + DC R + W PP + +K+N
Sbjct: 1190 FMGKWEKANLEIPS---------FNTPLPKDCKLPV----RSGKNLIWSPPNEDVLKVNF 1236
Query: 173 EGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LASELWALYHGLN--LVWERGF 229
+G S G A G ++R+ +G+ ++ +K LG S L +E L G+ + +
Sbjct: 1237 DG-SKLDNGQAAYGFVIRNSNGEVLMARAKALGVYPSILMAEAMGLLEGIKGAISLQNWS 1295
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLA 289
RK++ E ++ + + A+ +IL L + K Q REAN A+++A
Sbjct: 1296 RKIIFEGDNIAVINAMSPSATGPWTIANIILDAGALLGHFQEVKFQHCYREANRLADFMA 1355
Query: 290 AHCENQPLGSLAVFDTPPYAL--APIFQKDSTG 320
+ P + PPY + + + +KD G
Sbjct: 1356 HKGHSHP---EVLCWLPPYCIDFSLLIRKDVLG 1385
>gi|357457837|ref|XP_003599199.1| N-terminal acetyltransferase complex ARD1 subunit-like protein
[Medicago truncatula]
gi|355488247|gb|AES69450.1| N-terminal acetyltransferase complex ARD1 subunit-like protein
[Medicago truncatula]
Length = 470
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 27/158 (17%)
Query: 89 DVNPATETMLSEPKQG---QKSNSSDLFTGRSEKIKFKISSA--------------RPLS 131
D+ AT+ + + G +KSNS+ L G EK+ + + R +
Sbjct: 91 DLITATQNTMEQSCLGMHVRKSNSAAL--GLFEKMGYTLHEVKAKYFDDEEDAIVLRKIL 148
Query: 132 KGKLVNSMIDADCPPGFEKIHRPNSRIC-WMPP-PTNWVKLNIEGSSSRAQGSAGAGGIV 189
KGK V S +D+ P G RP+S C W PP P +W K N++GS G GG++
Sbjct: 149 KGKHVVSNMDS--PEGGG---RPSSGHCHWCPPQPKDW-KCNVDGSGKGKPEPVGIGGVI 202
Query: 190 RDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWER 227
D G + ++ ++G NS +E + L L+ E+
Sbjct: 203 WDSQGNRLAEFAASVGIGNSNEAEFSVIIFALELILEQ 240
>gi|255567727|ref|XP_002524842.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223535902|gb|EEF37562.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 122
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 216 ALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQ 275
+Y GL + WE G R++LVE +S V + + + +LI S R L + W K+
Sbjct: 2 GVYKGLLMAWECGIRQLLVETDSSCHVALILGKEAIAGTHASLIRSIRGLLAQAWQVKVY 61
Query: 276 LILREANSCANWLAAHCENQPLG 298
+ RE N A+ + PLG
Sbjct: 62 HVYREGNFVADKMTVMANKLPLG 84
>gi|242076138|ref|XP_002448005.1| hypothetical protein SORBIDRAFT_06g019550 [Sorghum bicolor]
gi|241939188|gb|EES12333.1| hypothetical protein SORBIDRAFT_06g019550 [Sorghum bicolor]
Length = 117
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 106 KSNSSDLFTGRSEKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPT 165
K N+ +L E + IS A+ + K + D P KI + W PP
Sbjct: 4 KVNAGELMPSSQETVWAVISLAQDILKDE------DNTSPSATPKIQK------WSVPPL 51
Query: 166 NWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNSLASELWALYHGLN 222
N++K+N++G+ G I+RD G +L + NLG ++L +E WA L+
Sbjct: 52 NYLKINVDGAYQAESRKGAWGFIIRDHDGSTVLAGAGNLGVVYDALLAETWACKQALD 109
>gi|255568679|ref|XP_002525311.1| hypothetical protein RCOM_1115840 [Ricinus communis]
gi|223535370|gb|EEF37044.1| hypothetical protein RCOM_1115840 [Ricinus communis]
Length = 95
Score = 45.8 bits (107), Expect = 0.026, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 184 GAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVE 235
GAG IVRD G G+ N+ + + +ELW LY L + W RG ++ VE
Sbjct: 12 GAGDIVRDRCGNGDTGFGMNIDSCSISEAELWGLYQQLRIAWNRGVVQLEVE 63
>gi|255568641|ref|XP_002525294.1| hypothetical protein RCOM_0581330 [Ricinus communis]
gi|223535452|gb|EEF37122.1| hypothetical protein RCOM_0581330 [Ricinus communis]
Length = 199
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
Query: 159 CWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESG--KWILGYSKNLGTSNSLASELWA 216
CW PP +KL+ + + + +G G ++RD G K + Y G + E A
Sbjct: 57 CWKPPDYGLLKLDTDAAVHFDKNISGLGMVLRDHKGCVKLVGSYPMKQGLPVEVV-EAMA 115
Query: 217 LYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQL 276
+ GL++ G +VE +S + V + A++ L N+ C +
Sbjct: 116 IKCGLSVASSHGLWPSVVESDSLQVVNAICNREVIFSELAAVLSEIFAMLSLNFSCDFKF 175
Query: 277 ILREANSCANWL---AAHCENQPL 297
I RE N AN L A +CE + +
Sbjct: 176 IFRECNQMANALSKSALNCETEAI 199
>gi|357507323|ref|XP_003623950.1| Receptor-like kinase [Medicago truncatula]
gi|355498965|gb|AES80168.1| Receptor-like kinase [Medicago truncatula]
Length = 429
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Query: 122 FKISSARPLSKGKLVNSMIDADCPPGFEKIH-----RPNSRICWMPPPTNWVKLNIEGSS 176
F++ RP + L+ + E H + I W W+KLN +G+
Sbjct: 97 FEVGFIRPNNPISLIGRFVQDIEDCNLEHFHIGPKLKEIIYIGWKRSHEGWIKLNSDGAC 156
Query: 177 SRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWA 216
G GG+ RD G+W+ Y+K + ++L +E+W
Sbjct: 157 KNMGIIFGCGGLFRDLDGRWVKCYTKKIRACDALHAEMWV 196
>gi|255585591|ref|XP_002533484.1| conserved hypothetical protein [Ricinus communis]
gi|223526660|gb|EEF28900.1| conserved hypothetical protein [Ricinus communis]
Length = 125
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%)
Query: 162 PPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGL 221
PPP N++K+N + S + G + RD G+ + G G S+ L E AL +
Sbjct: 15 PPPLNYIKINCDVSFIKEGYMLGYSVVCRDHRGRIVDGCVGRQGFSSVLQGETRALVEAM 74
Query: 222 NLVWERGFRKVLVECNSHEAVKCLE 246
R F++V+ E +S V+ ++
Sbjct: 75 LFAVSRKFKQVIFETDSFMLVQAIQ 99
>gi|194700066|gb|ACF84117.1| unknown [Zea mays]
gi|219887863|gb|ACL54306.1| unknown [Zea mays]
gi|413921720|gb|AFW61652.1| putative rnase H family protein isoform 1 [Zea mays]
gi|413921721|gb|AFW61653.1| putative rnase H family protein isoform 2 [Zea mays]
Length = 269
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 5/134 (3%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+S G AGAG I+R G I + LG + + A+E AL GL ++GF
Sbjct: 130 LEFDGASKGNPGKAGAGAIIRQVDGSVIAQLREGLGIATNNAAEYRALILGLTYAAKKGF 189
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSC---REYLCRNWDCKLQLILREANSCAN 286
+ + + +S + C ++ + N + C +E +++ +LRE NS A+
Sbjct: 190 KYIRAQGDSK--LVCNQVQDIWRVKNDNMASFCKKVKELKGTFHLFQIRHVLREYNSAAD 247
Query: 287 WLAAHCENQPLGSL 300
A P+G +
Sbjct: 248 AQANFAVELPVGEV 261
>gi|357502565|ref|XP_003621571.1| hypothetical protein MTR_7g017250 [Medicago truncatula]
gi|124361065|gb|ABN09037.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
gi|355496586|gb|AES77789.1| hypothetical protein MTR_7g017250 [Medicago truncatula]
Length = 127
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 34/128 (26%)
Query: 162 PPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGL 221
PP +KLN +GS G G GG+VR+ G WI G++
Sbjct: 23 PPSEGTLKLNSDGSFLEDFGCLGVGGVVRNHDGDWIAGFAH------------------- 63
Query: 222 NLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREA 281
+E G ++V+ + L IL R+ L N + L IL E
Sbjct: 64 ---YEVGVDLIIVDFD------------HTLHTYATSILHIRDVLHGNGNRTLVHILGEQ 108
Query: 282 NSCANWLA 289
N+CA+++A
Sbjct: 109 NTCADFMA 116
>gi|413921723|gb|AFW61655.1| putative rnase H family protein [Zea mays]
Length = 262
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 5/134 (3%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+S G AGAG I+R G I + LG + + A+E AL GL ++GF
Sbjct: 123 LEFDGASKGNPGKAGAGAIIRQVDGSVIAQLREGLGIATNNAAEYRALILGLTYAAKKGF 182
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSC---REYLCRNWDCKLQLILREANSCAN 286
+ + + +S + C ++ + N + C +E +++ +LRE NS A+
Sbjct: 183 KYIRAQGDSK--LVCNQVQDIWRVKNDNMASFCKKVKELKGTFHLFQIRHVLREYNSAAD 240
Query: 287 WLAAHCENQPLGSL 300
A P+G +
Sbjct: 241 AQANFAVELPVGEV 254
>gi|357115736|ref|XP_003559642.1| PREDICTED: uncharacterized protein LOC100826081 [Brachypodium
distachyon]
Length = 286
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 127 ARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAG 186
A+ LS+ ++V S ++ C + P+ R W+PPPT +K+N++G ++ Q +
Sbjct: 100 AKMLSELQVVQS--NSSCRSQPRRPAAPSPR--WIPPPTRMLKINVDGGVAKTQYKGASA 155
Query: 187 GIVRDESGKWI 197
I RDESG+++
Sbjct: 156 AICRDESGRYV 166
>gi|115442015|ref|NP_001045287.1| Os01g0930300 [Oryza sativa Japonica Group]
gi|113534818|dbj|BAF07201.1| Os01g0930300 [Oryza sativa Japonica Group]
Length = 322
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWALY 218
W+ P W+KLN++GS + G G G ++RD SG I L +++L +E+
Sbjct: 164 WIRPQEGWMKLNVDGSYYPSDGKGGTGAVLRDSSGNLIFAACGVLHRPASALEAEMVDCR 223
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCL 245
G+++ + ++VE + E V+ +
Sbjct: 224 EGISMALQWTLLPIIVETDCLEMVQLI 250
>gi|357469315|ref|XP_003604942.1| Cyclin D3 [Medicago truncatula]
gi|355505997|gb|AES87139.1| Cyclin D3 [Medicago truncatula]
Length = 238
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYS--KNLGTSNSLA 211
P S + W PP + + KLN++ S G G +VRD G ++G S + + +S
Sbjct: 82 PISDVHWTPPFSGFYKLNVDAESPIEGDKWGIGVVVRDNEGV-VVGASSWQVFSSPDSEV 140
Query: 212 SELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNR--ALILSCREYLCRN 269
++ A+ GL V + F ++ E ++ V L L A PN ++I C
Sbjct: 141 AKDIAMQKGLKFVNDMSFLNLIAESDASNVV--LALNARQQPPNYVGSIIRDCISIKGSF 198
Query: 270 WDCKLQLILREANSCANWLAAHCEN 294
+ RE N A +LA +C+
Sbjct: 199 RSLIFLHVRREVNQAAYYLANYCQT 223
>gi|224072673|ref|XP_002303832.1| predicted protein [Populus trichocarpa]
gi|222841264|gb|EEE78811.1| predicted protein [Populus trichocarpa]
Length = 104
Score = 45.4 bits (106), Expect = 0.037, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 256 RALILSCREYLCRNWDCKLQLILREANSCANWL---AAHCENQPLGSLAVFDTPPYALAP 312
RAL RE L R+W +++ R+AN CA+++ A C+N L ++D PP L
Sbjct: 34 RALTFEIRELLSRDWTVRIEHTFRKANFCADFMAKFATSCDN----GLMIWDEPPQGLQQ 89
Query: 313 IFQKDSTGI 321
+ + GI
Sbjct: 90 LLLANIMGI 98
>gi|242081781|ref|XP_002445659.1| hypothetical protein SORBIDRAFT_07g023590 [Sorghum bicolor]
gi|241942009|gb|EES15154.1| hypothetical protein SORBIDRAFT_07g023590 [Sorghum bicolor]
Length = 268
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 5/134 (3%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+S G AGAG I+R G I + LG + + A+E AL GL ++GF
Sbjct: 129 LEFDGASKGNPGKAGAGAIIRRIDGSVIAQLREGLGIATNNAAEYRALILGLTYAAKKGF 188
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWD---CKLQLILREANSCAN 286
+ + + +S + C ++ + N + C++ +++ +LRE NS A+
Sbjct: 189 KYIRAQGDSK--LVCNQVQDLWRVKNENMAGLCKKVKVLKGTFHLFQIRHVLREYNSAAD 246
Query: 287 WLAAHCENQPLGSL 300
A P+G +
Sbjct: 247 AQANFAVELPVGEV 260
>gi|410479732|ref|YP_006767369.1| ribonuclease H [Leptospirillum ferriphilum ML-04]
gi|124515191|gb|EAY56702.1| putative ribonuclease H [Leptospirillum rubarum]
gi|406774984|gb|AFS54409.1| putative ribonuclease H [Leptospirillum ferriphilum ML-04]
Length = 134
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 173 EGSSSRAQGSAGAGGIVRDESGKWILGYSKNL--GTSNSLASELWALYHGLNLVWERGFR 230
+G+S G + G +++DE G+ I + L GT+N +E AL GL +RG R
Sbjct: 6 DGASRGNPGPSSIGYLLKDEDGRVIFSEGRILPPGTNNQ--AEYQALIAGLQAARDRGVR 63
Query: 231 KVLVECNSHEAVKCLELPASFLDPNRALILSCREY---LCRNWDC-KLQLILREANSCAN 286
+LV +S ++ + +P +L+C E L R++D + + I RE N+ A+
Sbjct: 64 NLLVRADSELMIRQMTGKYRVRNPG---LLACYEQATNLSRSFDTIQFEHIPREQNAQAD 120
Query: 287 WLA 289
LA
Sbjct: 121 RLA 123
>gi|238481636|ref|NP_001154797.1| nucleic acid binding protein [Arabidopsis thaliana]
gi|98962281|gb|ABF59470.1| unknown protein [Arabidopsis thaliana]
gi|332010600|gb|AED97983.1| nucleic acid binding protein [Arabidopsis thaliana]
Length = 263
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 86/219 (39%), Gaps = 17/219 (7%)
Query: 106 KSNSSDLFTGRSEKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPT 165
KS + +F K + + A +K L N+M + + P+ W PP
Sbjct: 53 KSGNDLVFNHTRTKFQTTVEMALNDTKEWLDNTMTNEQ--QNGNRNADPSRNTKWSPPGR 110
Query: 166 NWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTSNSLASELWALYHGLNLV 224
+ +K N + S +G G I+R+ G I G K G + +E L +
Sbjct: 111 DKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLIWAIQAS 170
Query: 225 WERGFRKVLVECNSHEAVKCLELPAS------FLDPNRALILSCREYLCRNWDCKLQLIL 278
+ G +KV+ E ++ + + +S FLD ++ I S +
Sbjct: 171 YGFGHKKVIFEGDNQTITRMINTKSSNPRLQHFLDTIQSWIPSFES-------IEFSFKH 223
Query: 279 REANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKD 317
RE N CA++LA + ++F + PY L+P D
Sbjct: 224 REQNGCADFLAKQAIKENT-QWSLFHSCPYFLSPYVNND 261
>gi|195627916|gb|ACG35788.1| retrotransposon protein Ty3-gypsy subclass [Zea mays]
gi|238009648|gb|ACR35859.1| unknown [Zea mays]
gi|413921724|gb|AFW61656.1| putative rnase H family protein [Zea mays]
Length = 336
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 5/134 (3%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+S G AGAG I+R G I + LG + + A+E AL GL ++GF
Sbjct: 197 LEFDGASKGNPGKAGAGAIIRQVDGSVIAQLREGLGIATNNAAEYRALILGLTYAAKKGF 256
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSC---REYLCRNWDCKLQLILREANSCAN 286
+ + + +S + C ++ + N + C +E +++ +LRE NS A+
Sbjct: 257 KYIRAQGDSK--LVCNQVQDIWRVKNDNMASFCKKVKELKGTFHLFQIRHVLREYNSAAD 314
Query: 287 WLAAHCENQPLGSL 300
A P+G +
Sbjct: 315 AQANFAVELPVGEV 328
>gi|255551559|ref|XP_002516825.1| conserved hypothetical protein [Ricinus communis]
gi|223543913|gb|EEF45439.1| conserved hypothetical protein [Ricinus communis]
Length = 131
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 221 LNLVWERGFRKVLVECNSHEAVKC----LELPASFLDPNRALILSCREYLCRNWDCKLQL 276
++ W RG V+ E N + L+L + NR LI +C++ L R W ++
Sbjct: 22 MDFCWHRGL--VMTELNLRWILNLWWTWLQLNEVSMGVNRNLICACKDLLNRKWRVQVNH 79
Query: 277 ILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTRS 326
I RE N A+WLA H + G V + L + + D+ G+ R+
Sbjct: 80 IFREGNFVADWLANHLLTRERGVHYV-EQLHVDLQRLLEADAVGVAWVRA 128
>gi|255586499|ref|XP_002533890.1| conserved hypothetical protein [Ricinus communis]
gi|223526154|gb|EEF28490.1| conserved hypothetical protein [Ricinus communis]
Length = 155
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+ W P W+K+NI G++ +A +GAGG+ ++ K I +LG S + ++L +
Sbjct: 29 VIWFKPSLEWIKINIGGAARQAPRLSGAGGVFQNHESKAIASSINSLGISFAFEAKLVVV 88
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLE 246
++ V + +EC+S V+ L
Sbjct: 89 IFVVSKVLSFDLTPIWIECDSLYVVRLLH 117
>gi|218189041|gb|EEC71468.1| hypothetical protein OsI_03715 [Oryza sativa Indica Group]
Length = 157
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 168 VKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG----TSNSLASELWALYHGLNL 223
+KLN++GS G+ G G ++R+ G IL + G S+ L +EL A G+NL
Sbjct: 1 MKLNVDGSFDATSGTGGLGAVLRNSLGSVILSFFSACGFMERCSSPLEAELLARKEGINL 60
Query: 224 VWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANS 283
+ +++E + A+ ++ P + L+ E L + +Q + R N+
Sbjct: 61 ALQWTLLPLIMESDCLVAINMIQSPGREMSQLAYLVRDIEELLADDRVVSIQKVQRCQNN 120
Query: 284 CANWLA 289
+++LA
Sbjct: 121 ISHFLA 126
>gi|242085688|ref|XP_002443269.1| hypothetical protein SORBIDRAFT_08g016660 [Sorghum bicolor]
gi|241943962|gb|EES17107.1| hypothetical protein SORBIDRAFT_08g016660 [Sorghum bicolor]
Length = 188
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 149 EKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTS 207
E H + R W P W K+N +G + S G ++RD +G + ++
Sbjct: 13 EPKHPLSVRARWEKPEPGWTKVNTDGGFDQQACSGRTGVVIRDHTGVVVGAAARWFDDVE 72
Query: 208 NSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPN 255
++LA E A GL L E G KV++E V C L LDPN
Sbjct: 73 SALAVEALAAREGLELASELGLGKVILE------VDCQVLARFLLDPN 114
>gi|255570568|ref|XP_002526241.1| conserved hypothetical protein [Ricinus communis]
gi|223534435|gb|EEF36138.1| conserved hypothetical protein [Ricinus communis]
Length = 299
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS 212
R N+R W+ P VKLN + + +A A G++ D +G W+ G++ +G + L +
Sbjct: 230 RSNTR--WIKPLVGMVKLNTDWACVDLDRNATAEGLLHDANGSWLKGFAFRIGNCSPLDA 287
Query: 213 ELWALYHGLNL 223
ELW GL++
Sbjct: 288 ELWGALRGLDM 298
>gi|140068359|gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 23/141 (16%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+ W P +K+N +GS G A GG+ RD SG ++ +S N+G ++ +E A
Sbjct: 1013 VLWKNPSPPLLKVNTDGSV--VGGLAACGGLFRDSSGSFLGAFSCNIGLASVFHAETLAF 1070
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRN-WDCKLQL 276
L G+R + +E +S A+ N +L+ ++L RN W +L
Sbjct: 1071 ILALEHAAHHGWRNLWLESDSTSALMIFS--------NSSLV----QWLLRNRWHNAQRL 1118
Query: 277 --------ILREANSCANWLA 289
IL E N CA+ LA
Sbjct: 1119 GIQVISSHILHEGNRCADNLA 1139
>gi|8778958|gb|AAD49762.2|AC007932_10 F11A17.8 [Arabidopsis thaliana]
Length = 803
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 226 ERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCA 285
ER +V++E +S V L S +P L+ C ++ R+W ++ + REAN A
Sbjct: 4 ERRASRVVIEVDSELVVGLLTTGISEANPLSFLVRLCHGFILRDWIVRIVHVYREANRLA 63
Query: 286 NWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTG 320
+ LA + + PLG F+ P + I +D+ G
Sbjct: 64 DGLANYVFSLPLG-FHSFECVPEHVRDILLEDTGG 97
>gi|147810443|emb|CAN69805.1| hypothetical protein VITISV_033295 [Vitis vinifera]
Length = 329
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS-ELWALY 218
W PPP K+N G S G AG G +VRD G I S+ + + S E A+
Sbjct: 173 WCPPPPGVYKINFHGFSFSEFGDAGIGIVVRDFRGDLIAAMSRKVKYGSFPQSIEALAIS 232
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
GL + G +V +E +S + L S+ L +E + + K +
Sbjct: 233 LGLRFGHDLGLTRVFMEGDSAKLGXDLCSKTSY-------PLLNKESIZKYEXFKFAYVX 285
Query: 279 REANSCANWLAAHC 292
EAN A+ LA +
Sbjct: 286 EEANLVAHKLACYA 299
>gi|4432866|gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 156 SRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTSNSLASEL 214
++I W PP +VK N + + A G I+R+ G I G K TSN L +E
Sbjct: 1588 NKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAET 1647
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
AL L W RG+ +V +E + + +
Sbjct: 1648 KALLAALQQTWIRGYTQVFMEGDCQTLINLI 1678
>gi|351723061|ref|NP_001235218.1| uncharacterized protein LOC100527633 [Glycine max]
gi|255632818|gb|ACU16762.1| unknown [Glycine max]
Length = 165
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSK-NLGTSNSLASELWALY 218
W+PP + +KLN++ + + GAG +RDE+G+++ ++ N G + L +E WAL
Sbjct: 83 WIPPTSGSLKLNVDAAIFLSISCFGAGMCIRDENGRFLQARTQWNYGEPSPLEAEAWALL 142
Query: 219 HGLNLV 224
G+N +
Sbjct: 143 QGINWI 148
>gi|224113659|ref|XP_002332528.1| predicted protein [Populus trichocarpa]
gi|222832640|gb|EEE71117.1| predicted protein [Populus trichocarpa]
Length = 148
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W PP N +K N++GSS G +G GG++R+ G + +S +G +S +EL A+
Sbjct: 2 WSPPMINSLKWNVDGSSLGKPGPSGIGGVLRNHHGHLLGMFSVPVGILDSNIAELRAIVK 61
Query: 220 GLNLVWERGF---RKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQL 276
+ L+ + +++E +S A+ + P + + L S
Sbjct: 62 AIELLASNCLFHHQHLIIESDSVNAISWMNKPHNRPWKHHNLFSSVNRLKAYFGSITFSH 121
Query: 277 ILREANSCANWLA 289
I RE+N A+ +A
Sbjct: 122 IFRESNCMADCMA 134
>gi|302121705|gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
Length = 593
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 15/202 (7%)
Query: 123 KISSARPLSKG-KLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQG 181
+I + L KG + +D + P R + W P + K+N++ + RA+
Sbjct: 401 EIVICKELEKGFRFWQDFMDTEGNPTVRGAPRTSK---WNAPTAGFYKINVD-AGLRAER 456
Query: 182 SAGAGGIVRDESGKWILGYSK---NLGTSNSLASELWALYHGLNLVWERGFRKVLVECNS 238
G +VRD++G +++ ++ NL L + A+Y GL G +V +E +
Sbjct: 457 GGQVGIVVRDDTGAFVMATTRSFPNLVHPTLLEGQ--AVYTGLEFANALGLERVELESDC 514
Query: 239 HEAVKCLELPASFLDPN--RALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQP 296
V ++L + D + +I C+ L ++ + REAN A+ +A P
Sbjct: 515 LPVV--MQLSKGYTDRSDLSNIIDDCKMLLSNFQQVRIAHVRREANQAAHEMAKM-TIPP 571
Query: 297 LGSLAVFDTPPYALAPIFQKDS 318
L VF PP + I +K++
Sbjct: 572 DRELLVFSWPPDCICSIIEKEA 593
>gi|4582447|gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 156 SRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTSNSLASEL 214
++I W PP +VK N + + A G I+R+ G I G K TSN L +E
Sbjct: 1362 NKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAET 1421
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
AL L W RG+ +V +E + + +
Sbjct: 1422 KALLAALQQTWIRGYTQVFMEGDCQTLINLI 1452
>gi|125532038|gb|EAY78603.1| hypothetical protein OsI_33699 [Oryza sativa Indica Group]
Length = 207
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 2/143 (1%)
Query: 149 EKIHRPNSRIC-WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GT 206
EK+H +I W PPP K+NI+ + G A AG IVRD G +L K L
Sbjct: 46 EKVHANAVQIAKWEPPPEGVAKVNIDAGFRKETGDACAGIIVRDCRGLVLLAACKKLPRC 105
Query: 207 SNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL 266
S++ +E A G+ L +++E ++ + V L + + +I R +
Sbjct: 106 SSATQAEALACLEGVRLATNWIHMPIILESDNADVVAGLNITQASRAEWGGIIAEIRVAM 165
Query: 267 CRNWDCKLQLILREANSCANWLA 289
++ + R++N A+ LA
Sbjct: 166 QCLLQVQVHKVKRDSNRIAHMLA 188
>gi|77554244|gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1913
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWALY 218
W P W+KLN++GS G G ++RD G I L S+ L SEL A
Sbjct: 1795 WEKPQMGWMKLNVDGSYDSNSSKGGIGVVLRDSVGTVIFSACGFLERCSSPLESELLACK 1854
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLI 277
G+NL + +++E + AV ++ + L+ RE + D ++ I
Sbjct: 1855 EGINLALQWTLLPIILESDCLIAVNMIQSVKKEMSQLAYLVRDIRELMMGGRDIRVSKI 1913
>gi|94967119|ref|YP_589167.1| ribonuclease H [Candidatus Koribacter versatilis Ellin345]
gi|94549169|gb|ABF39093.1| ribonuclease H [Candidatus Koribacter versatilis Ellin345]
Length = 211
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Query: 164 PTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNL 223
P + +++G + G AG G ++ DE G+ + S LG + +E L L+
Sbjct: 13 PEKILIAHVDGGARGNPGPAGFGVVLEDERGQKVDALSGFLGHQTNNVAEYSGLLAALDY 72
Query: 224 VWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWD-CKLQLILREAN 282
+ GF+ + V +S VK + PN + S + R D +++ LR N
Sbjct: 73 AQKHGFKALKVVADSELLVKQIRGEYKVKSPNLLDLYSRARVMIRTLDWFRIEHTLRGGN 132
Query: 283 SCANWLAAHCENQPLG 298
A+ LA ++ +G
Sbjct: 133 KEADALANEAMDRGMG 148
>gi|255552696|ref|XP_002517391.1| nuclease, putative [Ricinus communis]
gi|223543402|gb|EEF44933.1| nuclease, putative [Ricinus communis]
Length = 255
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+S G AGAG ++R E G + + LGT+ + +E A+ GL +GF
Sbjct: 117 LEFDGASKGNPGPAGAGAVLRAEDGSMVCLLREGLGTATNNVAEYRAVILGLKHALRKGF 176
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRA-LILSCREYLCRNWDCKLQLILREANSCANWL 288
+ + V +S+ V ++ N A L +E + +++ +LRE NS A+
Sbjct: 177 KHIRVRGDSNLVVMQIKGLWKIKSQNVADLCKEAKELKNKFLSFQIEHVLREFNSEADTQ 236
Query: 289 A 289
A
Sbjct: 237 A 237
>gi|242091125|ref|XP_002441395.1| hypothetical protein SORBIDRAFT_09g025860 [Sorghum bicolor]
gi|241946680|gb|EES19825.1| hypothetical protein SORBIDRAFT_09g025860 [Sorghum bicolor]
Length = 210
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 28/180 (15%)
Query: 160 WMPPPTNWVKLNIEGSSSR-AQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALY 218
W PPP W KLN +GS A GG +RD +G+ +L +++ S E A+
Sbjct: 42 WSPPPRGWFKLNFDGSVYHDGSARASVGGAIRDSAGRVVLAFAEPTEHSTVGIVEARAMI 101
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCL-------ELPASFLDPNRALILSCREYLCRNWD 271
GL L ++++VE + V+ L +P + + R L L C
Sbjct: 102 RGLRLALGLRLQRLVVEGDDLVLVQLLRGEETQTRIPVALQEEIRGL-LRCFS------G 154
Query: 272 CKLQLILREANSCANWL---AAHCENQPLGSL--AVFDTPPYALAPIFQKDSTGIVQTRS 326
C ++ + RE N A+ L A HC G + VFD ++D G++ R+
Sbjct: 155 CDVRHVYREGNQVAHTLCRQAYHCPGVWAGIVPSVVFDKA--------EEDRRGVLHERA 206
>gi|224077608|ref|XP_002305325.1| predicted protein [Populus trichocarpa]
gi|222848289|gb|EEE85836.1| predicted protein [Populus trichocarpa]
Length = 257
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+S G AGAG ++R E G + + LG + + +E A+ GL ++GF
Sbjct: 119 LEFDGASKGNPGPAGAGAVLRAEDGSMVCRLREGLGIATNNVAEYRAVLLGLKHALKKGF 178
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSCRE 264
+ + V+ +S+ + C+++ + N+ L C+E
Sbjct: 179 KYICVQGDSN--LVCMQIQGLWKLKNQNLADLCKE 211
>gi|242059161|ref|XP_002458726.1| hypothetical protein SORBIDRAFT_03g039080 [Sorghum bicolor]
gi|241930701|gb|EES03846.1| hypothetical protein SORBIDRAFT_03g039080 [Sorghum bicolor]
Length = 130
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 145 PPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL 204
PP E P + + W PP W+K N + + G G ++RD++G ++ G +K
Sbjct: 29 PPLIE----PRAELRWERPPQGWIKCNTDEAFYEQTGQEAMGVVLRDDAGAFVRGSAKWY 84
Query: 205 GTS-NSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLEL 247
N+L E A L L + G +K+ +E N + V L L
Sbjct: 85 DHCLNALTMEAIACRDSLALAAQSGAQKIWLETNCQQIVLMLFL 128
>gi|357131201|ref|XP_003567228.1| PREDICTED: putative ribonuclease H protein At1g65750-like
[Brachypodium distachyon]
Length = 820
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 167 WVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT-SNSLASELWALYHGLNLVW 225
WVKLN +GS A G AGA ++RD G I + L +++L EL A G+ +
Sbjct: 701 WVKLNTDGSYVLATGQAGARMVLRDHLGAVIFSAVRYLPICADALEVELVACMEGIVIAL 760
Query: 226 ERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANS 283
+R + VE +S + + ++ A +LI + + + K I R NS
Sbjct: 761 QRSNEPIQVETDSAQLLAIVQANAVDRSRYSSLIQEVKRLVASQREIKFIKIHRSQNS 818
>gi|358348965|ref|XP_003638511.1| hypothetical protein MTR_135s0005 [Medicago truncatula]
gi|355504446|gb|AES85649.1| hypothetical protein MTR_135s0005 [Medicago truncatula]
Length = 209
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 171 NIEGSSSRAQGSAGAGGIVRDESGKWILGYSKN-LGTSNSLASELWALYHGLNLVWERGF 229
N++G+ +Q AG GGI+R+++G + G+S L +S+ + EL+A YHG+ L + G
Sbjct: 130 NVDGNCLDSQTRAGYGGILRNDAGFNLSGFSDYILNSSDIMYDELYAFYHGVLLTKDMGI 189
Query: 230 RKVL 233
+
Sbjct: 190 TNLF 193
>gi|45267888|gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1936
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 17/179 (9%)
Query: 130 LSKGKLVNSMIDADCPPGFEKIHRP---NSRICWMPPPTNWVKLNIEGSSSRAQGSAGAG 186
L KGK V + + P H P N R W P W+KLN++GS G G
Sbjct: 1749 LEKGKYV---VSVNFPKTTAIKHTPGAENRR--WERPRNGWMKLNVDGSFDINSEKGGIG 1803
Query: 187 GIVRDESGKWILGYSKNLGT-SNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
I+R+ G I ++L + S L +EL A GL+L + VE + ++ L
Sbjct: 1804 MILRNCLGNVIFSSCRSLDSCSGPLEAELHACVEGLHLALHWTLLPIQVETDCSSVIQLL 1863
Query: 246 ELPASFLDPNRALILS----CREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSL 300
P D +R+++ + + + + + + R N +++LA + L S
Sbjct: 1864 NHP----DKDRSVLANIAQEAKSLMAGDRQIAISKVQRSQNVISHFLANKARAESLSSF 1918
>gi|222612692|gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 149 EKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTS 207
EK R W PP N+VK+N +G+ S G G ++RD++G + G
Sbjct: 1420 EKSPRTGECAVWRRPPLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQ 1479
Query: 208 NSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLC 267
++ +E+ A + ERG ++ +E +S ++ + L +IL + +
Sbjct: 1480 DAFHAEVVACAAAIKTASERGMSRIELETDSMMLRYAIQDNSFNLSSLGGVILEIKHIIL 1539
Query: 268 RNWDC-KLQLILREANSCANWLAAH-CENQPLGSLAVFDTPPYALAPIFQKDSTGIV 322
+ + R N A+ LAA+ C Q + S A PP L + DS G+V
Sbjct: 1540 SCFHSFSVSYSPRSCNKVAHELAAYGCNLQTVSSWA--GCPP-GLERLVSSDSAGLV 1593
>gi|255576745|ref|XP_002529260.1| hypothetical protein RCOM_0661850 [Ricinus communis]
gi|223531296|gb|EEF33138.1| hypothetical protein RCOM_0661850 [Ricinus communis]
Length = 146
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 148 FEKIHRPN----SRIC-WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSK 202
+EK N ++C W+ P + VKLN +G+ GG++R+ W++G+
Sbjct: 13 YEKCLSSNISNTDKVCRWISPDKSEVKLNTDGAYVDLGRGMVVGGVLRNCRRGWLMGFKN 72
Query: 203 NLGTSNSLASELWALYHGLNLVW 225
+G+ + L ELW GLN+ +
Sbjct: 73 YIGSCSPLDVELWGALLGLNMAY 95
>gi|255581020|ref|XP_002531327.1| conserved hypothetical protein [Ricinus communis]
gi|223529077|gb|EEF31060.1| conserved hypothetical protein [Ricinus communis]
Length = 162
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
I W P +K N++GS+ QG G G++ D +G + +S N G +S E+ A+
Sbjct: 62 IGWQPSSVGDLKWNVDGSALGKQGPTGVSGVLTDHTGNILCLFSINYGVLDSNVVEVVAI 121
Query: 218 YHGLNLVWER---GFRKVLVECNSHEAV 242
L L + F +++E NS A+
Sbjct: 122 GKALQLSASKPSINFSNLIIESNSLNAI 149
>gi|242073652|ref|XP_002446762.1| hypothetical protein SORBIDRAFT_06g022025 [Sorghum bicolor]
gi|241937945|gb|EES11090.1| hypothetical protein SORBIDRAFT_06g022025 [Sorghum bicolor]
Length = 684
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWA 216
R W PPP WVKLN G A GGI+ ++ G+ + Y+ +G + + + A
Sbjct: 567 RTTWSPPPKGWVKLNFHGIGCSQGTPACIGGILHNDKGEVLSYYAGPVGDVDEIVASARA 626
Query: 217 LYHGLN 222
L GL
Sbjct: 627 LDMGLQ 632
>gi|10177944|dbj|BAB11303.1| non-LTR retrolelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 228
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 160 WMPPPTNWVKLNIEGS-SSRAQGSAGAGGIVRDESGKWILGYSKNLG--TSNSLASELWA 216
W P W+K N +GS +R +GS A I+RD++G G ++ G S++ +E +
Sbjct: 69 WQKPHMGWIKCNYDGSFVNRVRGST-AAWIIRDDNGV-FKGAAQATGATVSSAFEAECQS 126
Query: 217 LYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLD 253
L + +W RGFRKV++E + V L S D
Sbjct: 127 LILTMQQLWIRGFRKVILEGDCKLLVNVLNGRGSRFD 163
>gi|255584444|ref|XP_002532953.1| conserved hypothetical protein [Ricinus communis]
gi|223527282|gb|EEF29437.1| conserved hypothetical protein [Ricinus communis]
Length = 208
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 152 HRPNSR---ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL 204
H+P+ R I W PP W+KLN +G+ R + S AGG++ + G+WI G ++NL
Sbjct: 103 HKPDRRDVLIGWSAPPFGWLKLNSDGAVKRNRNSF-AGGVIHNYEGRWIKG-TQNL 156
>gi|218193322|gb|EEC75749.1| hypothetical protein OsI_12637 [Oryza sativa Indica Group]
Length = 537
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILG 199
P+SR W PPP WVKLN++G+ S QG G I+R+ GK IL
Sbjct: 394 PDSRTVWKPPPPGWVKLNVDGAFSAEQGIGAIGIIIRNSEGKAILS 439
>gi|357484653|ref|XP_003612614.1| hypothetical protein MTR_5g026940 [Medicago truncatula]
gi|355513949|gb|AES95572.1| hypothetical protein MTR_5g026940 [Medicago truncatula]
Length = 323
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG---------TS 207
+ W PP NW+K N +G++ + G GI R+ +G N G S
Sbjct: 104 EVLWQPPIFNWIKCNTDGTTLGSHGQDACAGIFRNCNG-------DNFGMFCPQPWHIIS 156
Query: 208 NSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLC 267
N+L + + + + + +L+EC+S A + P I+ C +L
Sbjct: 157 NALIAGIMGVILAIETTHNNNWHHLLIECDSKLATLAFKSPH---------IVPC--HLK 205
Query: 268 RNWDCKLQL----------ILREANSCANWLA 289
W+ L L I RE N+CAN L
Sbjct: 206 TRWNKCLHLLSSMNFMISHIFREDNNCANKLV 237
>gi|357465555|ref|XP_003603062.1| N-hydroxycinnamoyl/benzoyltransferase [Medicago truncatula]
gi|355492110|gb|AES73313.1| N-hydroxycinnamoyl/benzoyltransferase [Medicago truncatula]
Length = 754
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 35/186 (18%)
Query: 170 LNIEGSSSRAQGSAGAGGIV--------------------------RDESGKWILGYSKN 203
LN++GS R AG GG++ R+ +G ++ G+S
Sbjct: 495 LNVDGSCLRTPIRAGFGGVIRNSAGLYGQMEHCLRTPIRAGFGGVIRNSAGLYLSGFSGF 554
Query: 204 LGTSNS-LASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSC 262
+ S L +EL A++ GL + + + +++ S ++ + AS LI
Sbjct: 555 IADSTDILLAELSAIHRGLLMAVDMDYEELVCYSVSLLSINLITGQASKYHAYAVLIQDI 614
Query: 263 REYLCRNWDCKLQLILREANSCANWLA---AHCENQPLGSLAVFDTPPYALAPIFQKDST 319
++ L + + +Q LRE N CA+++A A ++ L + +PP L + + D
Sbjct: 615 KDLLVSH-NFTVQHCLREGNQCADFMAKLGASSNDEYL----IHSSPPQDLPDLLRNDGV 669
Query: 320 GIVQTR 325
GI R
Sbjct: 670 GIYFPR 675
>gi|226495263|ref|NP_001141955.1| uncharacterized protein LOC100274104 [Zea mays]
gi|194706572|gb|ACF87370.1| unknown [Zea mays]
gi|413921719|gb|AFW61651.1| putative rnase H family protein [Zea mays]
Length = 192
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 5/134 (3%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+S G AGAG I+R G I + LG + + A+E AL GL ++GF
Sbjct: 53 LEFDGASKGNPGKAGAGAIIRQVDGSVIAQLREGLGIATNNAAEYRALILGLTYAAKKGF 112
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSC---REYLCRNWDCKLQLILREANSCAN 286
+ + + +S + C ++ + N + C +E +++ +LRE NS A+
Sbjct: 113 KYIRAQGDSK--LVCNQVQDIWRVKNDNMASFCKKVKELKGTFHLFQIRHVLREYNSAAD 170
Query: 287 WLAAHCENQPLGSL 300
A P+G +
Sbjct: 171 AQANFAVELPVGEV 184
>gi|15232695|ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR reverse transcriptase [Arabidopsis thaliana]
gi|332641254|gb|AEE74775.1| RNase H domain-containing protein [Arabidopsis thaliana]
Length = 484
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 156 SRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTSNSLASEL 214
++I W PP +VK N + + A G I+R+ G I G K TSN L +E
Sbjct: 322 NKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAET 381
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
AL L W RG+ +V +E + + +
Sbjct: 382 KALLAALQQTWIRGYTQVFMEGDCQTLINLI 412
>gi|357493953|ref|XP_003617265.1| hypothetical protein MTR_5g089680 [Medicago truncatula]
gi|355518600|gb|AET00224.1| hypothetical protein MTR_5g089680 [Medicago truncatula]
Length = 188
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 152 HRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYS-KNLGTSNSL 210
H+P +R W P +++K N + ++ + +G G G I+R+E+G + + K GT +
Sbjct: 21 HKPPNRTKWKKPEEDFLKANCD-ANLQVKGWWGLGSIIRNENGLVMASAAWKIKGTEEVI 79
Query: 211 ASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNW 270
+E ++L + L + GFR+++ E ++ + + L+ I+ + L ++
Sbjct: 80 LAEAFSLLSTVRLAIDCGFRQMIFEGDNEKVFRTLKDNKIEDRSYLGSIIKEIQRLQFSF 139
Query: 271 D-CKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQ 315
D C+ I E N+ A+ +A + P S+ + + P A F+
Sbjct: 140 DKCQFNFIPGECNTTAHSMAQVAHSNP-NSIWIEEVPTQISAVYFK 184
>gi|424868008|ref|ZP_18291776.1| Putative ribonuclease H [Leptospirillum sp. Group II 'C75']
gi|206603679|gb|EDZ40159.1| Putative ribonuclease H [Leptospirillum sp. Group II '5-way CG']
gi|387221603|gb|EIJ76144.1| Putative ribonuclease H [Leptospirillum sp. Group II 'C75']
Length = 134
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL--GTSNSLASELWALYHGLNLVWER 227
L +G+S G + G +++DE G+ I + L GT+N +E AL GL +R
Sbjct: 3 LYCDGASRGNPGPSSIGYLLQDEEGRVIFSEGRVLPPGTNNQ--AEYQALIAGLQAARDR 60
Query: 228 GFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREY---LCRNWDC-KLQLILREANS 283
G R +LV +S ++ + P +L+C E L R++D + + I RE N+
Sbjct: 61 GVRNLLVRADSELMIRQMTGKYRVRHPG---LLACYEQATNLSRSFDTIQFEHIPREQNA 117
Query: 284 CANWLA 289
A+ LA
Sbjct: 118 QADRLA 123
>gi|357455843|ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
gi|355487250|gb|AES68453.1| 60S ribosomal protein L23 [Medicago truncatula]
Length = 547
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 13/155 (8%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSK-NLGTSNSLAS 212
P I W PP ++K N++ + Q G G VRD+ G+++ + G +
Sbjct: 51 PQDTIAWQPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEA 110
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNR------ALILSCREYL 266
E L + + + V +E + C + S D N ++I CR L
Sbjct: 111 EAVGLRDAILWLGQLELSNVQLELD------CKLVVDSIYDKNNNQAEFGSIIDDCRSLL 164
Query: 267 CRNWDCKLQLILREANSCANWLAAHCENQPLGSLA 301
+ + K+ + R+AN A+ A QPL LA
Sbjct: 165 QQFTNFKISFVRRQANVVAHSFARVSIFQPLFGLA 199
>gi|14140290|gb|AAK54296.1|AC034258_14 putative RNase [Oryza sativa Japonica Group]
Length = 289
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L+ +G+S G AGAG ++ E G+ I + LG + +E L GL GF
Sbjct: 151 LHFDGASKGNPGKAGAGAVLMTEDGRVISRLREGLGIVTNNVAEYRGLILGLRYAIRHGF 210
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSCRE 264
+K++V +S + C ++ ++ N+ ++ C+E
Sbjct: 211 KKIIVYGDSQ--LVCYQVKGTWQTKNQNMMELCKE 243
>gi|224152776|ref|XP_002337272.1| predicted protein [Populus trichocarpa]
gi|222838663|gb|EEE77028.1| predicted protein [Populus trichocarpa]
Length = 148
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W PP N +K N++GSS +G GG++R+ G + +S +G +S +EL A+
Sbjct: 2 WSPPMINSLKWNVDGSSLGKPDPSGIGGVLRNHHGHLLGMFSVPVGILDSNIAELRAIVK 61
Query: 220 GLNLVWERGF---RKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQL 276
+ L+ + +++E +S A+ + P S + L S
Sbjct: 62 AIELLASNCLFHHQHLIIESDSVNAISWMNKPHSRPWKHHNLFSSVNRLKAYFGSITFSH 121
Query: 277 ILREANSCANWLA 289
I RE+N A+ +A
Sbjct: 122 IFRESNCMADCMA 134
>gi|387169560|gb|AFJ66219.1| hypothetical protein 34G24.24 [Capsella rubella]
Length = 448
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
+ +G+S G +GA +++ E G +I + LG + + A+E L GL ERG+
Sbjct: 320 VEFDGASKGNPGLSGAAAVLKTEDGSFICKMRQGLGIATNNAAEYHGLILGLKHAIERGY 379
Query: 230 RKVLVECNS 238
RK+ V+ +S
Sbjct: 380 RKIKVKGDS 388
>gi|218184677|gb|EEC67104.1| hypothetical protein OsI_33899 [Oryza sativa Indica Group]
Length = 323
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L+ +G+S G AGAG ++ E G+ I + LG + +E L GL GF
Sbjct: 185 LHFDGASKGNPGKAGAGAVLMTEDGRVISRLREGLGIVTNNVAEYRGLILGLRYAIRHGF 244
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSCRE 264
+K++V +S + C ++ ++ N+ ++ C+E
Sbjct: 245 KKIIVYGDSQ--LVCYQVKGTWQTKNQNMMELCKE 277
>gi|115482348|ref|NP_001064767.1| Os10g0458700 [Oryza sativa Japonica Group]
gi|78708782|gb|ABB47757.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
gi|113639376|dbj|BAF26681.1| Os10g0458700 [Oryza sativa Japonica Group]
gi|222612954|gb|EEE51086.1| hypothetical protein OsJ_31786 [Oryza sativa Japonica Group]
Length = 323
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L+ +G+S G AGAG ++ E G+ I + LG + +E L GL GF
Sbjct: 185 LHFDGASKGNPGKAGAGAVLMTEDGRVISRLREGLGIVTNNVAEYRGLILGLRYAIRHGF 244
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSCRE 264
+K++V +S + C ++ ++ N+ ++ C+E
Sbjct: 245 KKIIVYGDSQ--LVCYQVKGTWQTKNQNMMELCKE 277
>gi|387965717|gb|AFK13846.1| LINE retrotransposon ribonuclease H [Beta vulgaris subsp. vulgaris]
Length = 120
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 183 AGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNS 238
A GG++R E G W L YS + +EL A+ HGL L E G + + VE ++
Sbjct: 4 ASRGGVIRREDGSWYLVYSFKTKARDPAHAELLAIRHGLKLAKEFGIKTLQVEMDA 59
>gi|359473412|ref|XP_002266599.2| PREDICTED: uncharacterized protein LOC100255243 [Vitis vinifera]
Length = 453
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
+ +G+S G AGA ++R +SG+ I + LG + + +E A+ GL ++G+
Sbjct: 122 VEFDGASKGNPGPAGAAAVLRSDSGRVICRVREGLGLATNNVAEYQAMILGLKYALKKGY 181
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSCR-------EYLCRNWDCKLQLILREAN 282
+ V+ +S + C+++ + N+ + + C+ E+L + L+ + EA+
Sbjct: 182 TSIRVQGDSK--LVCMQVQGLWKARNKNMSILCKEAKKLKNEFLSVEINHVLRGLNSEAD 239
Query: 283 SCANWLAAHCENQPLGSLAVFDTPPYALAPIFQK 316
+ AN LA H GSL + T + +F +
Sbjct: 240 AQAN-LAVHLAGG--GSLKITRTVSPSFHSLFSR 270
>gi|413949854|gb|AFW82503.1| hypothetical protein ZEAMMB73_671392 [Zea mays]
Length = 208
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 160 WMPPPTNWVKLNIEGSSSR-AQGSAGAGGIVRDESGKWILGYSK 202
W PPP W KLN +GS A GG++RD +G+ +L +++
Sbjct: 39 WSPPPRGWFKLNFDGSVYHDGSARASVGGVIRDSAGRVVLAFAE 82
>gi|297847370|ref|XP_002891566.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337408|gb|EFH67825.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 127
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG--TSNSLASEL 214
R W P W+K N +GS + + AG I+RD++G +I G S+ +G T +L SEL
Sbjct: 45 RHHWSAPEPGWIKCNFDGSFVNSGVPSEAGWILRDQNGTYI-GSSQEIGRNTETTLESEL 103
Query: 215 WALYHGLNLVWERGFRKVLVE 235
L + W +G+++ E
Sbjct: 104 QELLIAMQHCWCKGYKQTCFE 124
>gi|222631221|gb|EEE63353.1| hypothetical protein OsJ_18164 [Oryza sativa Japonica Group]
Length = 324
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 1/132 (0%)
Query: 158 ICWMPPPTNWVKLNIEGSSSR-AQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWA 216
+ W PP W KLN +GS A GG++R G +L +++ E A
Sbjct: 149 VRWARPPPGWHKLNFDGSVFHDGSRQASIGGVIRGCDGGVVLAFAETTEHRGVGVVEARA 208
Query: 217 LYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQL 276
+ GL L G +++VE + V+ L A+ L R + +++
Sbjct: 209 MMRGLRLALSCGVDRLVVEGDDLVLVELLRGEKPHTRIPAAMHEEILSLLRRFAEVEVRH 268
Query: 277 ILREANSCANWL 288
I RE NS A+ L
Sbjct: 269 IYREGNSVAHTL 280
>gi|218192800|gb|EEC75227.1| hypothetical protein OsI_11496 [Oryza sativa Indica Group]
Length = 1059
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL 198
W PP WVK+N++G+ G AGAG ++RD G +L
Sbjct: 918 WKAPPVGWVKINVDGAFVHQSGEAGAGVVIRDHLGSVLL 956
>gi|218185599|gb|EEC68026.1| hypothetical protein OsI_35837 [Oryza sativa Indica Group]
Length = 819
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LASELWALY 218
W P W+KLNI+GS + G G I+R+ +G I + S L +EL A
Sbjct: 658 WTKPQLGWMKLNIDGSFDASLNQGGIGAILRNNAGSVIFSACGFIERCRSALEAELLACK 717
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
G+ + + + +E + EAV + + LI E + N + ++ +L
Sbjct: 718 EGIIMALQWTLLPICIETDCLEAVNLNQSANNVRSELAHLIREIGELISGNREITIKKML 777
Query: 279 REANSCANWLA 289
R ++ +++LA
Sbjct: 778 RCQDTVSHFLA 788
>gi|224110972|ref|XP_002333005.1| predicted protein [Populus trichocarpa]
gi|222834500|gb|EEE72977.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 162 PP--PTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGY-SKNLGTSNSLASELWALY 218
PP T W+KLN++GSS+ G+AG GG++R G Y S +G +S +EL A+
Sbjct: 31 PPQYATQWLKLNVDGSSTGEPGNAGIGGVLRVHKGVVQCMYRSIPVGIKDSNEAELIAVI 90
Query: 219 HGLNLVWER---GFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQ 275
L L R ++++VE +S + + + NR L + L+
Sbjct: 91 RALELSSTREECTGKRIIVESDSTNVINRM-----IKESNRPWKFYVLFILASRFSSGLR 145
Query: 276 L-----ILREANSCANWLAAH 291
L ILRE NS + L
Sbjct: 146 LVKYSNILREGNSMTDALTKQ 166
>gi|359497102|ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 14/137 (10%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASELWALY 218
W P W+K+N++G+ +G+ GA + RD G+++ G++K + E +
Sbjct: 664 WQKPDYGWIKINVDGAVFPDKGAIGA--VFRDHQGRFMGGFAKPFPHQTLPKVVEALGVR 721
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRA---LILSCREYLCRNWDCKLQ 275
L+ + ER +++VE + V+ ++ + PN + +I+ C + L D ++
Sbjct: 722 EVLSWIHERSRSRIVVETDCLRVVQAIQHKSC---PNTSFGFIIVDCLDVLQHLVDVQVV 778
Query: 276 LILREANSCANWLAAHC 292
R ANS AAHC
Sbjct: 779 YARRSANS-----AAHC 790
>gi|224102015|ref|XP_002312512.1| predicted protein [Populus trichocarpa]
gi|222852332|gb|EEE89879.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+S G AGAG ++R++ G I + LG + + +E A+ G+ E+G+
Sbjct: 181 LEFDGASKGNPGQAGAGAVLRNDDGSLICRLREGLGIATNNMAEYRAILLGMKYALEKGY 240
Query: 230 RKVLVECNSHEAVKCLELPAS 250
K+ V+ +S + C+++ S
Sbjct: 241 TKIHVKGDSK--LVCMQIEGS 259
>gi|413921722|gb|AFW61654.1| putative rnase H family protein [Zea mays]
Length = 205
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+S G AGAG I+R G I + LG + + A+E AL GL ++GF
Sbjct: 130 LEFDGASKGNPGKAGAGAIIRQVDGSVIAQLREGLGIATNNAAEYRALILGLTYAAKKGF 189
Query: 230 RKVLVECNS 238
+ + + +S
Sbjct: 190 KYIRAQGDS 198
>gi|357451941|ref|XP_003596247.1| hypothetical protein MTR_2g075080 [Medicago truncatula]
gi|355485295|gb|AES66498.1| hypothetical protein MTR_2g075080 [Medicago truncatula]
Length = 109
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 11/73 (15%)
Query: 139 MIDADCPPGFEKIHRPNSRICWMPP------PTNWVKLNIEGSSSRAQGSAGAGGIVRDE 192
M+DA P H +S + W+ W++LN GSS R AG+G + +++
Sbjct: 1 MVDARVRPN----HPQHSIMGWVQQYKHNKLEDGWIRLNTNGSSKRDI-PAGSGWLFQND 55
Query: 193 SGKWILGYSKNLG 205
GKWI+G+S NLG
Sbjct: 56 EGKWIIGFSDNLG 68
>gi|222622285|gb|EEE56417.1| hypothetical protein OsJ_05582 [Oryza sativa Japonica Group]
Length = 265
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 148 FEKIHR---PNSRIC--WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL---G 199
+K+HR P + W PP +KLNI+GS G G G ++R+ G+ I G
Sbjct: 87 VKKVHRTVNPQDDVLHGWKPPDQGLMKLNIDGSFQPDTGKGGLGVVLRNRLGEVIFAACG 146
Query: 200 YSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLE 246
Y + + +L +EL A GL + + +++E + E + L+
Sbjct: 147 YIQR--CTGALEAELMACREGLLMALQWTLLPIIIETDCQEMLNLLQ 191
>gi|218199471|gb|EEC81898.1| hypothetical protein OsI_25721 [Oryza sativa Indica Group]
Length = 245
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 144 CPPGFEKIHRPNSRIC-WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSK 202
CP E + + W PP +WVK+N +G+ R+ G A AG ++RD G+ +L K
Sbjct: 175 CPQRSEPVKEDGVQFSNWRKPPVDWVKVNSDGAFVRSTGDASAGVVIRDHEGRVLLSSWK 234
>gi|125574872|gb|EAZ16156.1| hypothetical protein OsJ_31602 [Oryza sativa Japonica Group]
Length = 183
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 149 EKIHRPNSRIC-WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GT 206
EK+H +I W PPP K+NI+ + G A AG IVRD G +L K L
Sbjct: 46 EKVHANAVQIAKWDPPPEGMAKVNIDAGFRKETGDACAGIIVRDCRGLGLLAACKKLPRC 105
Query: 207 SNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLEL 247
S++ +E A G+ L +++E ++ + V L +
Sbjct: 106 SSATQAEALACLEGVRLATNWIHMPIILESDNADVVAGLNI 146
>gi|332291996|ref|YP_004430605.1| endopeptidase Clp [Krokinobacter sp. 4H-3-7-5]
gi|332170082|gb|AEE19337.1| Endopeptidase Clp [Krokinobacter sp. 4H-3-7-5]
Length = 178
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 66/169 (39%), Gaps = 34/169 (20%)
Query: 6 DTKYFLWGVFRDVKSNHILH-------ESHRELPSLV-SAMEYVCDGPAAMDNAEVTDMV 57
D K FLWG+ D + H++ + H E+ + S YV G A D ++
Sbjct: 14 DRKIFLWGMVDDKSAKHVIDRLLYLDAQGHGEIQLFINSPGGYVTSGFAMYDTIKM---- 69
Query: 58 VDMEGGKIVGPVDVV---VSKELYGKACGSHEKGD--VNPATETMLSEPKQGQKSNSSDL 112
I PV + ++ + EKG + P M+ +P G + +SD+
Sbjct: 70 -------IKSPVSTICTGLAASMGSLLLSVGEKGRRFIQPHARVMIHQPSGGARGQASDI 122
Query: 113 FTGRSEKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWM 161
E +K K SA+ L+ +C FEKI + R WM
Sbjct: 123 EITAQEIVKTKELSAQILAD----------NCGQTFEKIMKDFQRDHWM 161
>gi|22328543|ref|NP_680673.1| uncharacterized protein [Arabidopsis thaliana]
gi|332657396|gb|AEE82796.1| uncharacterized protein [Arabidopsis thaliana]
Length = 141
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 153 RPNSRIC-WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL-GYSKNLGTSNSL 210
RP+ R W PPP ++K N + + + I+RD +G I G +K + ++L
Sbjct: 54 RPSGRSKEWSPPPEGYLKCNFDSGYVQGRDYTSTCWIIRDSNGHVIHSGCAKLQQSYSAL 113
Query: 211 ASELWALYHGLNLVWERGFRKVLVE 235
+E H L +VW RG+R V E
Sbjct: 114 QAEALGFLHALQMVWIRGYRYVWFE 138
>gi|357498849|ref|XP_003619713.1| hypothetical protein MTR_6g065050 [Medicago truncatula]
gi|355494728|gb|AES75931.1| hypothetical protein MTR_6g065050 [Medicago truncatula]
Length = 80
Score = 43.1 bits (100), Expect = 0.17, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 263 REYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTG 320
R+ L RNW + I RE NSCA+W A L V PP L P+ D+ G
Sbjct: 18 RKLLQRNWQVHISHIYREGNSCADWFAKTGARNN-ADLTVCRNPPTDLGPLLIADANG 74
>gi|242061258|ref|XP_002451918.1| hypothetical protein SORBIDRAFT_04g009945 [Sorghum bicolor]
gi|241931749|gb|EES04894.1| hypothetical protein SORBIDRAFT_04g009945 [Sorghum bicolor]
Length = 121
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 13/108 (12%)
Query: 128 RPLSKGKLVNSMIDADCPPGFEKIHRPNSR----ICWMPPPTNWVKLNIEGSSSRAQGSA 183
+ +S ++V+ M+ RP R CW+PP T+ +K+NI+G+ +A+
Sbjct: 14 KIMSTKEMVHKMLSMKYVDTLYTQERPIKRKIGISCWVPPTTDVLKINIDGAFIQAEKKG 73
Query: 184 GAGGIVRDESGKWILGYSKNLG-TSNSLASE----LWALY----HGLN 222
G IVRD G ++ + + ++L++E L ALY HGL+
Sbjct: 74 AWGFIVRDHKGATVVAGAGRINVVHDALSAESQACLAALYVAMDHGLS 121
>gi|255548517|ref|XP_002515315.1| conserved hypothetical protein [Ricinus communis]
gi|223545795|gb|EEF47299.1| conserved hypothetical protein [Ricinus communis]
Length = 84
Score = 43.1 bits (100), Expect = 0.17, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 124 ISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSA 183
+ S+ P +L+ S + A +E R + + W PPP +K N++ SS G +
Sbjct: 1 MDSSFPYQATQLLQSSVGAR---NWELRSRTPALVTWQPPPITSIKWNVDASSKEKLGPS 57
Query: 184 GAGGIVRDESGKWILGYSKNLG 205
G GG+ R+ G++I +S + G
Sbjct: 58 GIGGVFRNSLGQFIGIFSCSTG 79
>gi|255541180|ref|XP_002511654.1| hypothetical protein RCOM_1610390 [Ricinus communis]
gi|223548834|gb|EEF50323.1| hypothetical protein RCOM_1610390 [Ricinus communis]
Length = 101
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
I W PP +KLN +G+ G A AGG++R+ G + N+ ++ ++ L
Sbjct: 28 ISWEPPNWAKLKLNSDGAFCSRTGRAKAGGLLRNHYGVRRGVFVFNIDCCSTPMQNIFGL 87
Query: 218 YHGLNLVWERGFR 230
Y GL L WE G R
Sbjct: 88 YKGLLLAWESGVR 100
>gi|255580010|ref|XP_002530839.1| hypothetical protein RCOM_0974690 [Ricinus communis]
gi|223529603|gb|EEF31552.1| hypothetical protein RCOM_0974690 [Ricinus communis]
Length = 122
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 33/55 (60%)
Query: 169 KLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNL 223
++N++ + + A GG++RD +G W+ + NLG + + +++ +YHGL L
Sbjct: 67 QINMDRALRSSLDRAACGGLIRDHNGDWVGSFMANLGVCSVMVAKVMGMYHGLRL 121
>gi|4522005|gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 14/162 (8%)
Query: 153 RPNSRI-CWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL-GYSKNLGTSNSL 210
RP SR W PP ++K N + + + G I+RD +G+ + G +K + ++L
Sbjct: 1548 RPLSRSKQWSSPPEGFLKCNFDSGYVQGRDYTSTGWILRDCNGRVLHSGCAKLQQSYSAL 1607
Query: 211 ASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNW 270
+E H L +VW RG+ V E ++ LEL +L Y R W
Sbjct: 1608 QAEALGFLHALQMVWIRGYCYVWFEGDN------LELTNLINKTEDHHLLETLLYDIRFW 1661
Query: 271 DCKLQL-----ILREANSCANWLAAHCENQPLGSLAVFDTPP 307
KL + RE N A+ L + N F PP
Sbjct: 1662 MTKLPFSSIGYVNRERNLAADKLTKYA-NSMSSLYETFHVPP 1702
>gi|205373739|ref|ZP_03226542.1| ribonuclease H [Bacillus coahuilensis m4-4]
Length = 134
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 168 VKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWER 227
+++ I+G+S+ G +GAG +R+ G+ YS LG N+ +E +AL + + ++
Sbjct: 2 IEVYIDGASAGDPGHSGAGVHIRN--GQQSESYSIPLGIMNNHQAEFFALLQAVEICEQK 59
Query: 228 GFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRN 269
G+ V +S + +E R + LS ++ L RN
Sbjct: 60 GYDMVSFRTDSQAVARAIEKEFVKNPTYREIFLSIQQVLSRN 101
>gi|255567810|ref|XP_002524883.1| conserved hypothetical protein [Ricinus communis]
gi|223535846|gb|EEF37507.1| conserved hypothetical protein [Ricinus communis]
Length = 67
Score = 43.1 bits (100), Expect = 0.19, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 168 VKLNIEGSS-SRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGL 221
+KL+ +G+ + A AGGI+RD G W+ G++ N G+ + +ELW L+ G
Sbjct: 1 MKLDTDGAYYCTSTQPAKAGGILRDCYGNWVSGFTVNTGSCSITEAELWGLHQGF 55
>gi|110289121|gb|ABB47654.2| hypothetical protein LOC_Os10g29450 [Oryza sativa Japonica Group]
Length = 183
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 149 EKIHRPNSRIC-WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GT 206
EK+H +I W PPP K+NI+ + G A AG IVRD G +L K L
Sbjct: 46 EKVHANAVQIAKWEPPPEGVAKVNIDAGFRKETGDACAGIIVRDCRGLVLLAACKKLPRC 105
Query: 207 SNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLEL 247
S++ +E A G+ L +++E ++ + V L +
Sbjct: 106 SSATQAEALACLEGVRLATNWIHMPIILESDNADVVAGLNI 146
>gi|77555695|gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 149 EKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTS 207
EK R W PP N+VK+N +G+ S G G +++D++G + G
Sbjct: 1447 EKSPRTGECAVWRRPPLNFVKINTDGAYSSNMKQGGWGFVIKDQTGAVLQAGAGPAAYLQ 1506
Query: 208 NSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLC 267
++ +E+ A + ERG ++ +E +S ++ + L +IL + +
Sbjct: 1507 DAFHAEVVACAAAIKTASERGMSRIELETDSMMLRYAIQDNSFNLSSLGGVILEIKHIIL 1566
Query: 268 RNWDC-KLQLILREANSCANWLAAH-CENQPLGSLAVFDTPPYALAPIFQKDSTGIV 322
+ + R N A+ LAA+ C Q + S A PP L + DS G+V
Sbjct: 1567 SCFHSFSVSYSPRSCNKVAHELAAYGCNLQTVSSWA--GCPP-GLERLVSSDSAGLV 1620
>gi|163848913|ref|YP_001636957.1| hypothetical protein Caur_3383 [Chloroflexus aurantiacus J-10-fl]
gi|222526870|ref|YP_002571341.1| hypothetical protein Chy400_3646 [Chloroflexus sp. Y-400-fl]
gi|163670202|gb|ABY36568.1| hypothetical protein Caur_3383 [Chloroflexus aurantiacus J-10-fl]
gi|222450749|gb|ACM55015.1| conserved hypothetical protein [Chloroflexus sp. Y-400-fl]
Length = 210
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 165 TNWVKLNIEGS-SSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNL 223
T W+ + I+G+ A+G AG G +VR+E G I Y + S +E WA L L
Sbjct: 62 TGWLVVQIDGTLGFPARGMAGLGIVVRNEHGDVIRLYDECAPAHTSNEAEYWAFIVALRL 121
Query: 224 VWERGF--RKVLVECNSHEAVKCLELPASF-LDPNRALILSCREYLCRNWDCKLQLIL-- 278
V +R F R+V +S V L A+ +P R L + R + + L+L+
Sbjct: 122 V-QRDFPNRRVRCLTDSRLVVDQLSGAAAVRREPLRTLYYTARTLVAQFPPQSLELVAIP 180
Query: 279 REANSCANWLA 289
RE N A+ LA
Sbjct: 181 RELNRLADALA 191
>gi|357474171|ref|XP_003607370.1| LCR-like protein [Medicago truncatula]
gi|355508425|gb|AES89567.1| LCR-like protein [Medicago truncatula]
Length = 141
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 35/160 (21%)
Query: 155 NSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASEL 214
+I W PP +++K N++ + Q S G G +RD G +I +K +G +++ L
Sbjct: 12 QQQIRWQPPDADYLKCNVDAAIFEEQRSFGIGICIRDSRGNFIKASTKAMGLRDAI---L 68
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKL 274
W + + G KV +E + CR L + + K+
Sbjct: 69 W--------LGQLGLSKVQIELDR----------------------KCRSLLQQFSNFKI 98
Query: 275 QLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIF 314
+ +AN A+ LA E++ VFD+ P + I
Sbjct: 99 NFVRIQANYVAHGLAR--ESKLYARHHVFDSIPSCINSIL 136
>gi|124360574|gb|ABN08573.1| Ribonuclease H [Medicago truncatula]
Length = 147
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 200 YSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALI 259
+S LG SN+ +E+ A+Y GL+L G ++ +S + L P + I
Sbjct: 10 FSSYLGLSNNTYAEIIAIYQGLHLARNFGCTYIICYSDSKGGIDILAKPVKKYHCYASAI 69
Query: 260 LSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDS 318
+ + + W+ KL LRE N+ A++LA + + + +TPP L I DS
Sbjct: 70 ANIIDLMNLEWEVKLCHSLREGNASADFLAKWGSSNDI-KWKLRNTPPEDLKAILLNDS 127
>gi|218194367|gb|EEC76794.1| hypothetical protein OsI_14903 [Oryza sativa Indica Group]
Length = 262
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 145 PPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL 204
PP +I+ ++ W PPP K+N++ ++ G AGAG I RD G +L K L
Sbjct: 135 PPARAEIN-AAQKMKWEPPPEGVAKINVDAGFNKEMGEAGAGIIARDCRGLVLLAACKKL 193
Query: 205 GTSNSLA-SELWALYHGLNL 223
+S A +E A G+ L
Sbjct: 194 SRCSSAAQAEALACLEGVQL 213
>gi|224108115|ref|XP_002314727.1| predicted protein [Populus trichocarpa]
gi|222863767|gb|EEF00898.1| predicted protein [Populus trichocarpa]
Length = 282
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 17/148 (11%)
Query: 150 KIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS 209
+ NSR C L +G+S G AGAG ++R + G I + LG + +
Sbjct: 135 QAQNSNSRSCL---------LEFDGASKGNPGQAGAGAVLRTDDGSLICRLREGLGIATN 185
Query: 210 LASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREY-LCR 268
+E A+ G+ ++G+ K+ V+ +S + C+++ S+ + + C E +
Sbjct: 186 NMAEYRAILLGMKYALQKGYTKIQVKGDSK--LVCMQIQGSWKAKHVNITNLCTEAKKLK 243
Query: 269 NWDCKLQL--ILREANSCANW---LAAH 291
N + +LRE NS A+ LA H
Sbjct: 244 NSFLSFHISHVLREFNSEADAQANLAVH 271
>gi|255572856|ref|XP_002527360.1| conserved hypothetical protein [Ricinus communis]
gi|223533279|gb|EEF35032.1| conserved hypothetical protein [Ricinus communis]
Length = 90
Score = 42.7 bits (99), Expect = 0.24, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 223 LVWERGFRKVLVECNSHEAVKCLELPASFLDPNRA-LILSCREYLCRNWDCKLQLILREA 281
+VW GF ++ VE +S L DP+ LIL+ + + R W +L+ + REA
Sbjct: 11 MVWIAGFSRICVELDSKAITDSLSQEIGD-DPSCCILILAICKLISRPWQIRLRHVFREA 69
Query: 282 NSCANWLAAH 291
N C +WLA
Sbjct: 70 NQCVDWLAGQ 79
>gi|218200979|gb|EEC83406.1| hypothetical protein OsI_28856 [Oryza sativa Indica Group]
Length = 1143
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 130 LSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIV 189
L+KGKLV + + + +P R W P W+KLNI+GS + G G I+
Sbjct: 1061 LAKGKLVLKV--GNVKQHTQTTCKPQPR--WERPSNGWMKLNIDGSFDSKTENGGIGAIL 1116
Query: 190 RDESGKWILGYSKNL 204
RD SGK I K L
Sbjct: 1117 RDSSGKPIFACCKPL 1131
>gi|399920229|gb|AFP55576.1| hypothetical protein [Rosa rugosa]
Length = 237
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS 212
RP + W PPP N V++N + ++ S I RD G + G + + + +A+
Sbjct: 19 RPPRQQSWCPPPLNTVRINTDACWFQSSLSGAIAAIARDSRGAVLGGKAFRILAPSPMAA 78
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC 272
E AL + L + +V++ +S ++CLE+ + D A I+ L +
Sbjct: 79 EALALREAVCLAMDFTLGEVIISSDSKSLIQCLEMRSRAPDWRAATIVEQVRSLTDSRKV 138
Query: 273 KLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIF 314
I R AN A+ +A+ S V + PP ++ F
Sbjct: 139 SWSWISRSANQAAHLVASLVHRGVCSSDWVQNPPPLSVIFCF 180
>gi|357123204|ref|XP_003563302.1| PREDICTED: uncharacterized protein LOC100831320 [Brachypodium
distachyon]
Length = 349
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 9/165 (5%)
Query: 145 PPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL 204
P G E+ PNS + + L +G+ G +GAG +VR G I + L
Sbjct: 193 PKGAEQEPLPNSHLSCI--------LEFDGACKGNPGKSGAGVVVRRPDGSVIAQLREGL 244
Query: 205 GTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRA-LILSCR 263
G + + A+E AL GL +GF+ + + +S ++ + N A L +
Sbjct: 245 GIATNNAAEYRALLLGLRYAANKGFKYIRAQGDSKLVCNQVQNVWRARNDNMADLCKKVK 304
Query: 264 EYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPY 308
E R ++ +LRE N+ A+ A P G + PY
Sbjct: 305 ELKGRFLVFQVNHVLREFNADADAQANFAVELPAGEIQEQSNFPY 349
>gi|405371435|ref|ZP_11027041.1| ribonuclease H [Chondromyces apiculatus DSM 436]
gi|397088908|gb|EJJ19862.1| ribonuclease H [Myxococcus sp. (contaminant ex DSM 436)]
Length = 212
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
Query: 144 CPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKN 203
PP EK P + P +++ +G++ G AGAG ++ D +G + +
Sbjct: 60 SPP--EKAESPRAEPAAASEPHPRLRVYSDGAARGNPGPAGAGAVLMDPTGNVVARLGRF 117
Query: 204 LGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCL----ELPASFLDPNRALI 259
LGT + ++E L GL G R+V V +S ++ L ++ ++ L P L
Sbjct: 118 LGTQTNNSAEYMGLLLGLKHAQSLGAREVDVYADSELLIRQLGGRYQVKSATLKP---LY 174
Query: 260 LSCREYLCRNWDCKLQLILREANSCANWLA 289
R+ L KL + R N+ A+ ++
Sbjct: 175 EEARKLLKGFTKVKLHHVPRAQNAEADEMS 204
>gi|240255735|ref|NP_680570.4| RNase H domain-containing protein [Arabidopsis thaliana]
gi|332656904|gb|AEE82304.1| RNase H domain-containing protein [Arabidopsis thaliana]
Length = 182
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 169 KLNIEGSSSRAQGSAGAGGIVRDESGKWIL-GYSKNLGTSNSLASELWALYHGLNLVWER 227
K N + + +G I+R+ +G IL G +K +++SL +E+ H L ++W
Sbjct: 45 KCNFDSGFMQGSPYTRSGWIIRESNGHTILCGSAKLHPSTSSLHAEVLGFLHALQVIWIH 104
Query: 228 GFRKVLVECNSHEAVKCL--ELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCA 285
G R V E ++ + V L + L P L+ R ++ + C + + RE NS A
Sbjct: 105 GLRYVWFETDNRDLVTLLNNDEDHRLLGP---LLCDIRYWMLKLPYCSIDFVNRERNSAA 161
Query: 286 NWLAAH 291
+ + H
Sbjct: 162 DTSSLH 167
>gi|414591408|tpg|DAA41979.1| TPA: hypothetical protein ZEAMMB73_722280, partial [Zea mays]
Length = 178
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTS----NSLASELW 215
W PPP +K+N +G+ ++ G I+RD SG G + GT +L ++
Sbjct: 43 WQPPPEYVLKINFDGTFTKENRKGAWGFIIRDHSG---FGIAAGAGTMEYAFQALHTKTE 99
Query: 216 ALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNW-DCKL 274
L + G R +++E + VK L S L L R+++ ++ +
Sbjct: 100 GCLAALQSAFNLGIRNIVLESDCLNLVKALNSTDSDLAFEGVLFKELRKFIASDFISANV 159
Query: 275 QLILREANSCANWLAAH 291
+ R NS A+ LA +
Sbjct: 160 MVCNRSCNSYAHALARY 176
>gi|255564922|ref|XP_002523454.1| RNA binding protein, putative [Ricinus communis]
gi|223537282|gb|EEF38913.1| RNA binding protein, putative [Ricinus communis]
Length = 446
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 3/128 (2%)
Query: 163 PPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTS-NSLASELWALYHGL 221
P ++++K NI+ + + + G +VRD++G + K + S +E A+ L
Sbjct: 285 PSSDFIKTNIDAAVDENRSLSDVGAVVRDQAGSVLFSLQKRVSLKCQSDVAEAVAILEAL 344
Query: 222 NLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREA 281
V + F++V++E +S A+ L+ L L+ C + L+L
Sbjct: 345 ITVQDSNFQQVIIESDSLTAINGLQSKVFGLLSFHQLLEDILSRCCSF--VHVLLVLLTG 402
Query: 282 NSCANWLA 289
N A+WLA
Sbjct: 403 NVVAHWLA 410
>gi|255544466|ref|XP_002513294.1| conserved hypothetical protein [Ricinus communis]
gi|223547202|gb|EEF48697.1| conserved hypothetical protein [Ricinus communis]
Length = 193
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILG 199
RI W PP +WVKLN +G SA AGG++R+ G+W+ G
Sbjct: 91 RIGWKCPPADWVKLNSDGGVR--DNSAAAGGLLRNFRGRWLAG 131
>gi|255583890|ref|XP_002532695.1| conserved hypothetical protein [Ricinus communis]
gi|223527578|gb|EEF29695.1| conserved hypothetical protein [Ricinus communis]
Length = 202
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 153 RPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS 212
RP+ + W+PP N +K N+ GS G AG GG++R+ G +I +S +G +S +
Sbjct: 87 RPDLQ--WLPPLANELKWNVYGSIIGKPGIAGIGGVLRNAEGLFIALFSCPIGIKDSNDA 144
Query: 213 ELWALYHGLNLVWERG 228
E+ A+ L + G
Sbjct: 145 EVHAICKAFELTVQNG 160
>gi|357452573|ref|XP_003596563.1| hypothetical protein MTR_2g082040 [Medicago truncatula]
gi|124361101|gb|ABN09073.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
gi|355485611|gb|AES66814.1| hypothetical protein MTR_2g082040 [Medicago truncatula]
Length = 81
Score = 42.4 bits (98), Expect = 0.32, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
I W VK N +G+ A GG++ D +WI Y + +G + L +E+W L
Sbjct: 15 IGWKWAQEERVKFNADGAYKYKGVIATCGGLLYDSYERWIKCYIRKIGPYDDLHAEMWGL 74
Query: 218 YHGLNLV 224
Y GL+++
Sbjct: 75 YIGLDML 81
>gi|297795275|ref|XP_002865522.1| hypothetical protein ARALYDRAFT_917523 [Arabidopsis lyrata subsp.
lyrata]
gi|297311357|gb|EFH41781.1| hypothetical protein ARALYDRAFT_917523 [Arabidopsis lyrata subsp.
lyrata]
Length = 352
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 62/171 (36%), Gaps = 17/171 (9%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTSNSLASELWALY 218
W P +VK N + S S+G G I+RD +G + G K G +E AL
Sbjct: 191 WCKPERGYVKCNFDASHYEGNQSSGLGRIIRDSNGTCLDCGMGKFQGRQTIEEAECSALI 250
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWD------- 271
+ W G+R V E ++ V + + L + Y+ W
Sbjct: 251 WAIQASWALGYRHVEFEGDNANIVNLIN--------EGGINLRLKHYMEEIWQWRNMFNS 302
Query: 272 CKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIV 322
K RE N CA+ LA P + ++ P L + D+ +
Sbjct: 303 IKFTFRHREQNGCADLLARKAVQSP-NNYYLYHCCPSFLNSLVNNDADSVF 352
>gi|357139404|ref|XP_003571272.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Brachypodium distachyon]
Length = 593
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 149 EKIHRPNS-RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTS 207
++ H+P + + W PP + VKLN++GS S GSAG G ++R++ G+ + ++L
Sbjct: 432 QRNHQPRAAQARWKPPDPDSVKLNVDGSFSPDDGSAGIGLVLRNQKGEVLFSACRSLTRC 491
Query: 208 -NSLASELWALYHGL 221
++L +EL A GL
Sbjct: 492 FDALDAELTACEDGL 506
>gi|356506434|ref|XP_003521988.1| PREDICTED: receptor-like protein 12-like [Glycine max]
Length = 577
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W P K+N G + A G ++ ++ ++ + + L L ELW +
Sbjct: 18 WKKPLQGTTKINYNGPYLNSVALAACGVVLWNDKSGFLKAFLRRLEHCTILEVELWTILF 77
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCLELP 248
G+ + + G+R ++VE + E VK +E P
Sbjct: 78 GMYIACDLGYRTIVVENDCIEVVKLMEDP 106
>gi|297845448|ref|XP_002890605.1| RNase H domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336447|gb|EFH66864.1| RNase H domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 536
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
+ +G+S G +GA +++ E G I + LG + + A+E AL GL E+G+
Sbjct: 220 IEFDGASKGNPGLSGAAAVLKTEDGSLICRLRQGLGIATNNAAEYHALILGLKYAIEKGY 279
Query: 230 RKVLVECNS 238
+K+ V+ +S
Sbjct: 280 KKIKVKGDS 288
>gi|357501431|ref|XP_003621004.1| hypothetical protein MTR_7g005920 [Medicago truncatula]
gi|355496019|gb|AES77222.1| hypothetical protein MTR_7g005920 [Medicago truncatula]
Length = 109
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 186 GGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFR 230
G ++R++SG W G+S+NLG L ++ W + L + W +GFR
Sbjct: 32 GEVIRNDSGSWRTGFSRNLGACLILMAKHWGILTILQVAWNKGFR 76
>gi|222530387|ref|YP_002574269.1| ribonuclease H [Caldicellulosiruptor bescii DSM 6725]
gi|222457234|gb|ACM61496.1| ribonuclease H [Caldicellulosiruptor bescii DSM 6725]
Length = 198
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 11/131 (8%)
Query: 172 IEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRK 231
+G+S G AGAG ++ + +G IL YSK LG + +E AL L E G ++
Sbjct: 6 FDGASKGNPGPAGAGIVIVNPAGNVILEYSKELGIKTNNEAEYLALIELLQKALELGIKE 65
Query: 232 VLVECNSHEAVK------CLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCA 285
+ V+ +S + + +P + +L E L + K + I RE N A
Sbjct: 66 LEVQGDSQLVINQVFGNWNINMPHLY-----SLYEQATELLEKFDKVKARWIPREKNQLA 120
Query: 286 NWLAAHCENQP 296
+ L+ +P
Sbjct: 121 DLLSNKAITKP 131
>gi|171921105|gb|ACB59203.1| RNase H domain-containing protein [Brassica oleracea]
Length = 492
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
+ +G+S G +GA +++ E G I + LG + + A+E L GL ERG+
Sbjct: 161 IEFDGASKGNPGLSGAAAVLKTEDGSLICKVRQGLGIATNNAAEYHGLILGLKHAIERGY 220
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC---KLQLILREANSCAN 286
+K+ V+ +S + C+++ + N L E +C ++ +LR NS A+
Sbjct: 221 KKIKVKGDSK--LICMQIKGKWKVNNEVLSKLHEEAKQLTNECISFEISHVLRNLNSAAD 278
Query: 287 WLA 289
A
Sbjct: 279 EQA 281
>gi|357151637|ref|XP_003575856.1| PREDICTED: uncharacterized protein LOC100822983 [Brachypodium
distachyon]
Length = 253
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 152 HRPNSRIC---WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTS 207
RP+ R W+PPP ++ K+N+ +R+ I R +GK++ S + G S
Sbjct: 123 QRPDQRPISGRWLPPPEDFFKINVNAGVARSGAGGSFAAICRTATGKFLGASSVTIAGLS 182
Query: 208 NSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLE 246
+ A E A L+L + + V + +K LE
Sbjct: 183 DPTALEALACNEALSLAMDLNISRFYVSSDCMLVIKSLE 221
>gi|357144247|ref|XP_003573224.1| PREDICTED: uncharacterized protein LOC100841248 [Brachypodium
distachyon]
Length = 352
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 162 PPPTNWVK--LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
P P N + L +G+ G +GAG +VR G I + LG + + A+E AL
Sbjct: 203 PLPDNHLSCILEFDGACKGNPGKSGAGVVVRRPDGSVIAHLREGLGIATNNAAEYRALLL 262
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSC---REYLCRNWDCKLQL 276
GL ++GF+ + + +S + C ++ + N + C +E + +L
Sbjct: 263 GLRYAAKKGFKYIRAQGDSK--LVCYQVQDLWRVKNDNMADLCKKVKELKGQFLSFQLNH 320
Query: 277 ILREANSCANWLAAHCENQPLGSL 300
+LRE N+ A+ A P+G +
Sbjct: 321 VLREFNADADAQANFAVELPVGEI 344
>gi|222641012|gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
Length = 1256
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 18/140 (12%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNSLASELWALY 218
W P +KLN++GS ++G G G ++R+ +G+ I ++ S++L EL A
Sbjct: 1096 WSKPLPGSMKLNVDGSFQESEGKGGIGAVLRNCTGEVIFAACGHVDHCSSALEMELLASR 1155
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRA------LILSCREYLCRNWDC 272
GL L + +++E + CL + F D A LI L N D
Sbjct: 1156 DGLALALQWTLLPIVIETD------CLAMVHLFRDATGAKSELAFLITEIDSLLVGNRDI 1209
Query: 273 KLQLILREANSCANWLAAHC 292
LR N L +HC
Sbjct: 1210 SFNKCLRSQN-----LISHC 1224
>gi|218187038|gb|EEC69465.1| hypothetical protein OsI_38661 [Oryza sativa Indica Group]
Length = 725
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS 209
I W PP W K+N++G+ A G AGAG I+R+ G+ +L + + S
Sbjct: 620 IKWKAPPIGWAKVNVDGAYVAATGKAGAGIIIRNHMGEVLLSSWRTIKNCGS 671
>gi|77556115|gb|ABA98911.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 589
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS 209
I W PP W K+N++G+ A G AGAG I+R+ G+ +L + + S
Sbjct: 484 IKWKAPPIGWAKVNVDGAYVAATGKAGAGIIIRNHMGEVLLSSWRTIKNCGS 535
>gi|222617256|gb|EEE53388.1| hypothetical protein OsJ_36435 [Oryza sativa Japonica Group]
Length = 740
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS 209
I W PP W K+N++G+ A G AGAG I+R+ G+ +L + + S
Sbjct: 635 IKWKAPPIGWAKVNVDGAYVAATGKAGAGIIIRNHMGEVLLSSWRTIKNCGS 686
>gi|222618679|gb|EEE54811.1| hypothetical protein OsJ_02230 [Oryza sativa Japonica Group]
Length = 1209
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 6/143 (4%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LAS 212
P+ + W PP W K+N++G+ + G AG G ++RD G +L + + S +
Sbjct: 1040 PSDLVRWEAPPQGWAKINVDGAFVQQIGEAGTGIVIRDHVGDVLLTSWNGIRSCQSPEEA 1099
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC 272
E A GL L + V++E + V L A P + + L
Sbjct: 1100 EAQACRDGLRLAADWIQMPVILESDCANVVASLTSGAKNRSPLWQVFQEIKSILPLLPAF 1159
Query: 273 KLQLILREANSCANWLAAHCENQ 295
K I R AN AHC +Q
Sbjct: 1160 KFNRINRGANE-----VAHCLSQ 1177
>gi|218188462|gb|EEC70889.1| hypothetical protein OsI_02427 [Oryza sativa Indica Group]
Length = 1477
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 6/143 (4%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LAS 212
P+ + W PP W K+N++G+ + G AG G ++RD G +L + + S +
Sbjct: 1308 PSDLVRWEAPPQGWAKINVDGAFVQQIGEAGTGIVIRDHVGDVLLTSWNGIRSCQSPEEA 1367
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC 272
E A GL L + V++E + V L A P + + L
Sbjct: 1368 EAQACRDGLRLAADWIQMPVILESDCANVVASLTSGAKNRSPLWQVFQEIKSILPLLPAF 1427
Query: 273 KLQLILREANSCANWLAAHCENQ 295
K I R AN AHC +Q
Sbjct: 1428 KFNRINRGANE-----VAHCLSQ 1445
>gi|357460739|ref|XP_003600651.1| hypothetical protein MTR_3g064710 [Medicago truncatula]
gi|355489699|gb|AES70902.1| hypothetical protein MTR_3g064710 [Medicago truncatula]
Length = 70
Score = 42.0 bits (97), Expect = 0.40, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 164 PTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGL 221
P N K +GS G A GG++++ G+W+ Y + +G ++L +E+W ++ G+
Sbjct: 15 PLNLCK--CDGSYKDTLGLANCGGLLKNSDGRWLKRYCRKIGICDALTTEIWGMFLGM 70
>gi|218197967|gb|EEC80394.1| hypothetical protein OsI_22529 [Oryza sativa Indica Group]
Length = 349
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 10/147 (6%)
Query: 149 EKIHRPNSRIC-WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GT 206
EK+H +I W PPP K+NI+ + G A AG IVRD G +L K L
Sbjct: 173 EKVHASAVQIAKWEPPPEGVAKVNIDAGFRKETGDACAGIIVRDCWGLVLLAACKKLPRC 232
Query: 207 SNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL 266
S++ +E A G+ L +++E ++ + V L + + +I R +
Sbjct: 233 SSATLAEALAFLEGVRLAMNWIHMPIILESDNADVVAGLNITQASRAEWGGIIAEIRVAM 292
Query: 267 CRNWDCKLQL----ILREANSCANWLA 289
C LQ+ + R++N A+ LA
Sbjct: 293 ----QCLLQVQVHKVKRDSNRIAHMLA 315
>gi|85818709|gb|EAQ39869.1| Clp protease [Dokdonia donghaensis MED134]
Length = 182
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 66/169 (39%), Gaps = 34/169 (20%)
Query: 6 DTKYFLWGVFRDVKSNHILH-------ESHRELPSLV-SAMEYVCDGPAAMDNAEVTDMV 57
D K FLWG+ D + H++ + H E+ + S YV G A D ++
Sbjct: 18 DRKIFLWGMVDDKSAKHVIDRLLYLDAQGHDEIQLFINSPGGYVTSGFAMYDTIKM---- 73
Query: 58 VDMEGGKIVGPVDVV---VSKELYGKACGSHEKGD--VNPATETMLSEPKQGQKSNSSDL 112
I PV + ++ + EKG + P M+ +P G + +SD+
Sbjct: 74 -------IKSPVSTICTGLAASMGSLLLSVGEKGRRFIQPHARVMIHQPSGGARGQASDI 126
Query: 113 FTGRSEKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWM 161
E +K K SA+ L+ +C F+KI + R WM
Sbjct: 127 EITAQEIVKTKELSAQILAD----------NCGQTFDKIMKDFQRDHWM 165
>gi|357500571|ref|XP_003620574.1| hypothetical protein MTR_6g087130 [Medicago truncatula]
gi|357500755|ref|XP_003620666.1| hypothetical protein MTR_6g088420 [Medicago truncatula]
gi|355495589|gb|AES76792.1| hypothetical protein MTR_6g087130 [Medicago truncatula]
gi|355495681|gb|AES76884.1| hypothetical protein MTR_6g088420 [Medicago truncatula]
Length = 97
Score = 42.0 bits (97), Expect = 0.40, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 177 SRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
SR G G+V + + +WI GY K +G + L E++ +YH L+LVW+ F
Sbjct: 35 SRGLGDTLGCGVVHNSNWRWIGGYIKKIGAYDVLYVEMY-IYHHLDLVWKEPF 86
>gi|357491129|ref|XP_003615852.1| hypothetical protein MTR_5g073120 [Medicago truncatula]
gi|355517187|gb|AES98810.1| hypothetical protein MTR_5g073120 [Medicago truncatula]
Length = 64
Score = 42.0 bits (97), Expect = 0.41, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 189 VRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERG 228
+ + K I GYS+ +GT ++L +E+W +Y G+ L W +G
Sbjct: 13 IEASANKMIKGYSQKIGTCDTLCAEIWGMYLGMKLSWRQG 52
>gi|296086505|emb|CBI32094.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 10/129 (7%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
+ +G+S G AGA ++R +SG+ I + LG + + +E A+ GL ++G+
Sbjct: 293 VEFDGASKGNPGPAGAAAVLRSDSGRVICRVREGLGLATNNVAEYQAMILGLKYALKKGY 352
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSCR-------EYLCRNWDCKLQLILREAN 282
+ V+ +S + C+++ + N+ + + C+ E+L + L+ + EA+
Sbjct: 353 TSIRVQGDSK--LVCMQVQGLWKARNKNMSILCKEAKKLKNEFLSVEINHVLRGLNSEAD 410
Query: 283 SCANWLAAH 291
+ AN LA H
Sbjct: 411 AQAN-LAVH 418
>gi|359488729|ref|XP_002280233.2| PREDICTED: uncharacterized protein LOC100242330 [Vitis vinifera]
gi|296087711|emb|CBI34967.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 166 NWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVW 225
+W+ L +G+S G AGAG ++R + G ++ + +G + + +E AL G+
Sbjct: 147 SWL-LQFDGASKGNPGQAGAGAVLRADDGSAVIHLREGVGIATNNVAEYRALILGMKYAL 205
Query: 226 ERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREY--LCRNW-DCKLQLILREAN 282
++G +++ +S + C++ + N+ + C E L + + +++ +LRE N
Sbjct: 206 KKGIKRIRARGDSQ--LVCMQFQGLWKTKNQNMADLCEEAKELGKKFLSFQIEHVLREFN 263
Query: 283 SCANWLA 289
S A+ A
Sbjct: 264 SEADAQA 270
>gi|242090371|ref|XP_002441018.1| hypothetical protein SORBIDRAFT_09g018950 [Sorghum bicolor]
gi|241946303|gb|EES19448.1| hypothetical protein SORBIDRAFT_09g018950 [Sorghum bicolor]
Length = 379
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 5/158 (3%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W PP W+K+N++ S A G A G ++R+ G+ +L + L S A
Sbjct: 221 WEVPPAGWIKVNVDASFVNATGEASVGVVIRNHKGEVLLTAWRVLLRCASAE----ACVD 276
Query: 220 GLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILR 279
GL L + ++E +S V L R IL +EYL + K++ + R
Sbjct: 277 GLRLASKWCAGPTILESDSARLVAALGDGREDRSELRWTILEAKEYLQLLPEWKIKKVKR 336
Query: 280 EANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKD 317
+ N A+ L AH + + S P + + + D
Sbjct: 337 DCNGVAHEL-AHLARRNVHSATWLRQAPACVVDLLKYD 373
>gi|312794240|ref|YP_004027163.1| ribonuclease h [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312181380|gb|ADQ41550.1| ribonuclease H [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 199
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 11/131 (8%)
Query: 172 IEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRK 231
+G+S G AGAG ++ + G+ IL YSK LG + +E AL L E G R+
Sbjct: 6 FDGASKGNPGPAGAGIVIVNPEGRVILEYSKELGIRTNNEAEYLALIELLQKALELGIRE 65
Query: 232 VLVECNSHEAVK------CLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCA 285
+ + +S + + +P + N+A E L + K + I RE N A
Sbjct: 66 LEIMGDSQLVINQVFGNWNINMPHLYTLYNQA-----TELLEKFDKVKARWIPREKNQLA 120
Query: 286 NWLAAHCENQP 296
+ L+ +P
Sbjct: 121 DSLSNKAITRP 131
>gi|91805563|gb|ABE65510.1| unknown [Arabidopsis thaliana]
Length = 142
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 169 KLNIEGSSSRAQGSAGAGGIVRDESGKWIL-GYSKNLGTSNSLASELWALYHGLNLVWER 227
K N + + +G I+R+ +G IL G +K +++SL +E+ H L ++W
Sbjct: 5 KCNFDSGFMQGSPYTRSGWIIRESNGHTILCGSAKLHPSTSSLHAEVLGFLHALQVIWIH 64
Query: 228 GFRKVLVECNSHEAVKCL--ELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCA 285
G R V E ++ + V L + L P L+ R ++ + C + + RE NS A
Sbjct: 65 GLRYVWFETDNRDLVTLLNNDEDHRLLGP---LLCDIRYWMLKLPYCSIDFVNRERNSAA 121
Query: 286 NWLAAH 291
+ + H
Sbjct: 122 DTSSLH 127
>gi|242054339|ref|XP_002456315.1| hypothetical protein SORBIDRAFT_03g033860 [Sorghum bicolor]
gi|241928290|gb|EES01435.1| hypothetical protein SORBIDRAFT_03g033860 [Sorghum bicolor]
Length = 397
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 156 SRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTSNSLASEL 214
+R W PP+ +K+N++G+ + G G ++RDE G I G + + N L +EL
Sbjct: 228 TRRRWEKPPSGMLKVNVDGAFRDVDKTGGWGYVIRDEEGAVIQTGLGRIMYAGNPLQTEL 287
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCLE 246
A G G ++E ++ V ++
Sbjct: 288 MACLEGAKAALSLGASHFILETDAQHVVWAMQ 319
>gi|242067869|ref|XP_002449211.1| hypothetical protein SORBIDRAFT_05g006430 [Sorghum bicolor]
gi|241935054|gb|EES08199.1| hypothetical protein SORBIDRAFT_05g006430 [Sorghum bicolor]
Length = 375
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 156 SRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTSNSLASEL 214
+R W PP+ +K+N +G+ + G G ++RDE G I G + + NSL +EL
Sbjct: 206 TRRRWEKPPSGLLKVNADGAFRDVDKTGGWGYVIRDEEGAVIQTGLGRIMYAGNSLHTEL 265
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCLE 246
A G G ++E ++ V ++
Sbjct: 266 MACLEGAKAALSLGASHFILETDAQHVVWAMQ 297
>gi|224130582|ref|XP_002328325.1| predicted protein [Populus trichocarpa]
gi|222838040|gb|EEE76405.1| predicted protein [Populus trichocarpa]
Length = 79
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASE 213
I W PP W KL+ +G+S +G+ GAGG++RD +G+ + G G+ L +E
Sbjct: 22 INWTPPHDCWKKLDKDGAS---KGNVGAGGLIRDFNGRLVTGLEAGGGSCEDLKAE 74
>gi|357506447|ref|XP_003623512.1| hypothetical protein MTR_7g071850 [Medicago truncatula]
gi|355498527|gb|AES79730.1| hypothetical protein MTR_7g071850 [Medicago truncatula]
Length = 159
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 145 PPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL 204
PG+ + + + W P WVK NI+GS G A GGI RD ++ + NL
Sbjct: 20 APGYRR-FKDIMEVTWKAPTAGWVKANIDGSVK--AGLASCGGIFRDHRATFLGAFVCNL 76
Query: 205 GTSNSLASEL 214
G + +EL
Sbjct: 77 GDVSVFEAEL 86
>gi|224154489|ref|XP_002337484.1| predicted protein [Populus trichocarpa]
gi|222839453|gb|EEE77790.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Query: 124 ISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSA 183
I S P S L+ S+ D + H W PP N +K N++GSS G +
Sbjct: 49 IHSDFPYSPSDLIRSV---DGLLRWSNAHSFRIHNMWSPPMINSLKWNVDGSSLGKPGPS 105
Query: 184 GAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF---RKVLVECNSHE 240
G GG++R+ G + +S +G +S +EL A+ + L + +++E +S
Sbjct: 106 GIGGVLRNHHGHLLGIFSVPVGILDSNIAELRAIVKAIELSASNCLFHHQHLIIESDSVN 165
Query: 241 AVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLA 289
A+ + P + + L S I RE+N A+ +A
Sbjct: 166 AISWMNKPHNRPWKHHNLFSSVNRLKAYFGSITFSHIFRESNCMADCMA 214
>gi|224082676|ref|XP_002306790.1| predicted protein [Populus trichocarpa]
gi|222856239|gb|EEE93786.1| predicted protein [Populus trichocarpa]
Length = 103
Score = 41.6 bits (96), Expect = 0.51, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 22/26 (84%)
Query: 210 LASELWALYHGLNLVWERGFRKVLVE 235
+A+E+WA++HGL+L+W GFR V +E
Sbjct: 1 MAAEMWAVFHGLDLIWRLGFRHVELE 26
>gi|125551844|gb|EAY97553.1| hypothetical protein OsI_19481 [Oryza sativa Indica Group]
Length = 320
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 2/167 (1%)
Query: 160 WMPPPTNWVKLNIEGS-SSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALY 218
W PP W KLN +GS A GG++R G +L +++ E A+
Sbjct: 145 WWAPPGGWCKLNFDGSVYDDGSRRASIGGVIRGCDGGVVLAFAEITEHWTVGVVEARAMI 204
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
GL L +++VE + V+ + + A+ + L D +++ I
Sbjct: 205 RGLRLALACFVERLVVEGDDLVLVQLIRGEETQTRIPAAMHEEILDLLRCFADVEVRHIY 264
Query: 279 REANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
RE NS A+ L P G T P A+ D G+V R
Sbjct: 265 REGNSVAHTLCRQAYVHP-GLWTDCSTLPAAVWEKIDDDLRGVVHER 310
>gi|38636806|dbj|BAD03047.1| putative RNase H domain-containing protein [Oryza sativa Japonica
Group]
gi|38636983|dbj|BAD03243.1| putative RNase H domain-containing protein [Oryza sativa Japonica
Group]
gi|125560347|gb|EAZ05795.1| hypothetical protein OsI_28030 [Oryza sativa Indica Group]
gi|125602385|gb|EAZ41710.1| hypothetical protein OsJ_26246 [Oryza sativa Japonica Group]
Length = 351
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+S G AGAG ++R G I + LG + + A+E AL GL ++GF
Sbjct: 208 LEFDGASKGNPGKAGAGAVIRRLDGTVIAQLREGLGIATNNAAEYRALILGLTYAAKKGF 267
Query: 230 RKVLVECNS 238
+ + + +S
Sbjct: 268 KYIRAQGDS 276
>gi|218186019|gb|EEC68446.1| hypothetical protein OsI_36656 [Oryza sativa Indica Group]
Length = 314
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 140 IDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILG 199
+ + PP R W P T W+KLN++GS + G G G ++RD SG I
Sbjct: 221 LPSQAPPAVSSPRR------WEKPSTRWMKLNVDGSFQASYGKGGIGAVLRDSSGNVIFA 274
>gi|218198886|gb|EEC81313.1| hypothetical protein OsI_24467 [Oryza sativa Indica Group]
Length = 247
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNSLASELWALY 218
W P W+KLN++GS + G ++R+ G+ I L S L +EL A
Sbjct: 119 WEKPNQGWMKLNVDGSFDASSGKGCISAVLRNSQGEVIFSACGFLDRCSGPLEAELLACK 178
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCL 245
G+N+ + ++VE + AVK +
Sbjct: 179 EGINMALQWTLLPIVVELDCSVAVKLI 205
>gi|222635388|gb|EEE65520.1| hypothetical protein OsJ_20966 [Oryza sativa Japonica Group]
Length = 393
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 10/147 (6%)
Query: 149 EKIHRPNSRIC-WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GT 206
EK+H +I W PPP K+NI+ + G A AG IVRD G +L K L
Sbjct: 217 EKVHASAVQIAKWEPPPEGVAKVNIDAGFRKETGDACAGIIVRDCWGLVLLAACKKLPRC 276
Query: 207 SNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL 266
S++ +E A G+ L +++E ++ + V L + + +I R +
Sbjct: 277 SSATLAEALAFLEGVRLAMNWIHMPIILESDNADVVAGLNITQASRAEWGGIIAEIRVAM 336
Query: 267 CRNWDCKLQL----ILREANSCANWLA 289
C LQ+ + R++N A+ LA
Sbjct: 337 ----QCLLQVQVHKVKRDSNRIAHMLA 359
>gi|124359641|gb|ABN06016.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 84
Score = 41.2 bits (95), Expect = 0.71, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 183 AGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNS 238
A GG++RD +G ++ + N+ SN L +E+ AL G+ L W+ R ++ +S
Sbjct: 2 ADFGGLIRDSNGGFMCAFYGNIVYSNILHAEILALLQGIRLCWKEDLRNIIYYIDS 57
>gi|242038447|ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
gi|241920472|gb|EER93616.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
Length = 463
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL-GYSKNLGTSNSLASELWALY 218
W PP + +KLN +GS S + G ++RD G I+ G + + +EL A
Sbjct: 300 WSKPPVDILKLNCDGSFSPETRAGSWGVLIRDHEGDVIMSGRGRVNHLMTPMQAELIACL 359
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPA 249
G+ L G ++++E ++ E VK ++ A
Sbjct: 360 QGVQLAANLGIGRLILETDALEVVKAIKTSA 390
>gi|357119306|ref|XP_003561383.1| PREDICTED: uncharacterized protein LOC100823728 [Brachypodium
distachyon]
Length = 865
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNSLASELWALY 218
W PP KLN++GS A G I+RD +G+ ++ + L + L +EL A
Sbjct: 708 WNPPGLGTTKLNVDGSFVMETRKARMGMILRDHNGQPLMAACRALKPCVDPLEAELEACA 767
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLE 246
GL+ +R + +E +S EA+ ++
Sbjct: 768 EGLHFAQQRTDLPIYLETDSAEAIALIQ 795
>gi|15233451|ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thaliana]
gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis thaliana]
gi|7269807|emb|CAB79667.1| putative protein [Arabidopsis thaliana]
gi|67633766|gb|AAY78807.1| putative reverse transcriptase/RNA-dependent DNA polymerase
[Arabidopsis thaliana]
gi|332660185|gb|AEE85585.1| Ribonuclease H-like protein [Arabidopsis thaliana]
Length = 575
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESG--KWILGYSKNLGTSNSLASELWAL 217
W PPP WVK N + + +R G G ++R+E G KW +G + L +EL A+
Sbjct: 420 WRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKW-MGARALPKLKSVLEAELEAM 478
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCL---ELPASFLDPNRALILSCREYLCRNWDCKL 274
+ + + V+ E +S ++ L E+ S + I + L + + K
Sbjct: 479 RWAVLSLSRFQYNYVIFESDSQVLIEILNNDEIWPSL----KPTIQDLQRLLSQFTEVKF 534
Query: 275 QLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDS 318
I RE N+ LA + L L +D Y++ P + + S
Sbjct: 535 VFIPREGNT----LAERVARESLSFLN-YDPKLYSIVPSWARSS 573
>gi|357517263|ref|XP_003628920.1| hypothetical protein MTR_8g069120 [Medicago truncatula]
gi|355522942|gb|AET03396.1| hypothetical protein MTR_8g069120 [Medicago truncatula]
Length = 130
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 196 WILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASF-LDP 254
WI+G+S +++L +EL A+ GL E+ + ++ E + EAV + L
Sbjct: 7 WIVGFSHYEAEADALLAELRAIKIGLGFCSEKCYVNIICESDCLEAVDLIIAGRDHTLHT 66
Query: 255 NRALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIF 314
IL ++ L + + L +LRE N C +++A + + + PP+ + +
Sbjct: 67 YTTDILHIKDALHGSGNTTLVHVLREQNMCVDFMA---KERSRIRCSTRLNPPHGMESLI 123
Query: 315 QKDSTG 320
KD G
Sbjct: 124 LKDKLG 129
>gi|327399396|ref|YP_004340265.1| ribonuclease H [Hippea maritima DSM 10411]
gi|327182025|gb|AEA34206.1| ribonuclease H [Hippea maritima DSM 10411]
Length = 177
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 172 IEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRK 231
++G+SS G AG G +++ ++G + S+ +G + + +E AL GL + E G +K
Sbjct: 53 VDGASSSNPGKAGIGVVIK-KNGVVVDKISEFIGIATNNVAEYSALIRGLKRLKELGVKK 111
Query: 232 VLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWD-CKLQLILREANSCANWLA 289
V V +S VK L+ D N + + L ++ ++ I R+ NS A+ LA
Sbjct: 112 VNVFSDSELVVKQLKGIYRVKDKNLKTLYNEVLRLSNKFEYLNIEHIKRDKNSMADTLA 170
>gi|388490516|gb|AFK33324.1| unknown [Lotus japonicus]
Length = 167
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +GSS GSAGAG ++R E G + + +G + +E L GL E+G+
Sbjct: 30 LEFDGSSKGNPGSAGAGAVLRAEDGSKVY-LREGVGNQTNNQAEYRGLILGLKHAHEQGY 88
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRA-LILSCREYLCRNWDCKLQLILREANSCANWL 288
+ + V+ +S K +E +PN A L +E + + + R+ NS A+
Sbjct: 89 QHINVKGDSQLVCKQVEGSWKARNPNIASLCNEAKELKSKFQSFDINHVPRQYNSEADVQ 148
Query: 289 AAHCENQPLGSLAVF 303
A N P G + +
Sbjct: 149 ANLGVNLPAGHVEEY 163
>gi|27552541|gb|AAO19364.1| hypothetical protein [Oryza sativa Japonica Group]
gi|37700351|gb|AAR00641.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 499
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASELWALY 218
W PPP V +N + + ++ G G ++RD G+ +L ++ + + +E A+
Sbjct: 424 WTPPPVGTVMINCDAALFQSSCQMGIGFLIRDHDGRCLLALNERVQNVTQPELAEAVAIR 483
Query: 219 HGLNLVWERGFRK 231
L+L E G++K
Sbjct: 484 RALSLAKEEGYQK 496
>gi|357140468|ref|XP_003571789.1| PREDICTED: uncharacterized protein LOC100839103 [Brachypodium
distachyon]
Length = 291
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKW-------ILGYSKNLGTSNSLAS 212
W+PPP+ K+N++ +R+ + + RDE GK+ ILG + +
Sbjct: 133 WIPPPSGACKINVDAGLARSGAAGALDAVCRDEHGKFLGASTVIILGMTDPTTLEAKACN 192
Query: 213 ELWALYHGLNL 223
E +L H LNL
Sbjct: 193 EALSLAHDLNL 203
>gi|357510571|ref|XP_003625574.1| hypothetical protein MTR_7g100640 [Medicago truncatula]
gi|355500589|gb|AES81792.1| hypothetical protein MTR_7g100640 [Medicago truncatula]
Length = 142
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 175 SSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKV 232
++SR +AG+GG+ + KW+ G+S+ L + EL + + L +V +RGF KV
Sbjct: 11 TASRRDIAAGSGGLFCNHDEKWLEGHSQILDRYSVYRVELLEILYNLQIVRDRGFSKV 68
>gi|118370087|ref|XP_001018246.1| RNase H family protein [Tetrahymena thermophila]
gi|89300013|gb|EAR98001.1| RNase H family protein [Tetrahymena thermophila SB210]
Length = 726
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 169 KLNIEGSSSRAQGSAGAGGIVRD-ESGKWILGYSKNLGTSNSLASELWALYHGLNLVWER 227
+L +G+S G +GAG I++D + +L YS +GT SE AL +G+ ++
Sbjct: 599 QLEFDGTSKGNPGRSGAGFIIKDLYTENKLLEYSVEVGTKTINQSEYLALIYGMYTCYKL 658
Query: 228 GFRKVLVECNSHEAVKCL 245
G +++ ++ +S +K +
Sbjct: 659 GIKQLTIQGDSEVVIKHM 676
>gi|332322201|emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1383
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWA 216
+ W PPP+N ++ N++ S A GG++RDE+G ++ +S + ++E++A
Sbjct: 1234 KAAWSPPPSNHLQWNVDASFKPGLEHAAVGGVLRDENGCFVCLFSSPIPRLEINSAEIYA 1293
Query: 217 LYHGLNL 223
++ L +
Sbjct: 1294 IFRALKI 1300
>gi|222631140|gb|EEE63272.1| hypothetical protein OsJ_18082 [Oryza sativa Japonica Group]
Length = 320
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 2/167 (1%)
Query: 160 WMPPPTNWVKLNIEGS-SSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALY 218
W PP W KLN +GS A GG++R G +L +++ E A+
Sbjct: 145 WWAPPGGWCKLNFDGSVYDDGSRRASIGGVIRGCDGGVVLAFAEITEHWTVGVVEARAMI 204
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
GL L +++VE + V+ + + A+ + L D +++ I
Sbjct: 205 RGLRLALACFVERLVVEGDDLVLVQLIRGEETQTRIPAAMHEEILDLLRCFADVEVRHIY 264
Query: 279 REANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
RE NS A+ L P G T P A+ D G+V R
Sbjct: 265 REGNSMAHTLCRQAYVHP-GLWTDCATLPAAVWEKIDDDLRGVVHER 310
>gi|6587849|gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYH 219
W+PPPT+WVK N+ S SR AG ++R++ G +L +S+ ++++S L A +
Sbjct: 1067 WLPPPTDWVKCNVGLSWSRRNRLAGVAWVLRNDRGN-VLMHSRR--AFSNISSFLEAQF- 1122
Query: 220 GLNLVW 225
L++VW
Sbjct: 1123 -LSIVW 1127
>gi|357458791|ref|XP_003599676.1| hypothetical protein MTR_3g041640 [Medicago truncatula]
gi|355488724|gb|AES69927.1| hypothetical protein MTR_3g041640 [Medicago truncatula]
Length = 147
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 145 PPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL 204
PP KI + W PP WVK NI+ SS+ S+ G I R+ ++L + +N
Sbjct: 72 PPKASKI----IEVIWRPPIPQWVKCNIDRSSTNQ--SSACGCIFRNHDSNFLLCFGENT 125
Query: 205 GTSNSLASELWALYHGLNL 223
N+L EL + L
Sbjct: 126 RVGNALHVELSGTMRAIKL 144
>gi|224086715|ref|XP_002307942.1| predicted protein [Populus trichocarpa]
gi|222853918|gb|EEE91465.1| predicted protein [Populus trichocarpa]
Length = 152
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 164 PTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNL 223
PT +K N++GSS G AG GG++RD +GK I +S +G +S +E A+ L L
Sbjct: 50 PTMVLKWNVDGSSPGKPGMAGIGGVLRDCNGKVICLFSIPVGIKDSNEAEFIAVVKALEL 109
Query: 224 VWER 227
R
Sbjct: 110 TSSR 113
>gi|255562409|ref|XP_002522211.1| conserved hypothetical protein [Ricinus communis]
gi|223538582|gb|EEF40186.1| conserved hypothetical protein [Ricinus communis]
Length = 87
Score = 40.8 bits (94), Expect = 0.98, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL 204
W PP+ ++K+N + + +GS GAG +VRD++G + K +
Sbjct: 39 WSSPPSGFIKINTDTTIDGNRGSVGAGAVVRDQAGSVLFSLQKRV 83
>gi|356557991|ref|XP_003547293.1| PREDICTED: uncharacterized protein LOC100816172 [Glycine max]
Length = 272
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 11/129 (8%)
Query: 143 DCPPGFEKIHRPNSRICWMPPP-TNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYS 201
DC P + + +C + + +NI+ + + A + D G ++ +
Sbjct: 66 DCCPILGGLIEVGAIVCICDKLRSATLGINIDVNLALVLIKAACADLRGDHFGSFVFAIT 125
Query: 202 KNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVK-----CLELPASFLDPNR 256
NLG + L +EL A+YHGL ++ ++ ++VE +S AV+ C +S+L N+
Sbjct: 126 CNLGFCSVLEAELRAIYHGLKIIRDKA---IVVESDSSLAVQMLNDGCSRQHSSYLLANK 182
Query: 257 ALILSCREY 265
++S EY
Sbjct: 183 --VVSLVEY 189
>gi|22094342|gb|AAM91869.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432719|gb|AAP54317.1| hypothetical protein LOC_Os10g34140 [Oryza sativa Japonica Group]
gi|125575170|gb|EAZ16454.1| hypothetical protein OsJ_31924 [Oryza sativa Japonica Group]
Length = 243
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 4/186 (2%)
Query: 124 ISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSA 183
++S S K V+ +++ E +R + W P +K+N++G+
Sbjct: 44 VASVLAFSVQKQVDELLNLALQQRREHKNRTVKK--WTQPAAEVLKINVDGAFKHQLLLG 101
Query: 184 GAGGIVRDESGKWI-LGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAV 242
G G ++RD I G + ++ +E+ A GL G + +E +S +
Sbjct: 102 GWGYVIRDVGAHVIQAGAGSSSRMQDAFHAEVMAGVKGLQAAANLGMANIQLESDSLTLI 161
Query: 243 KCLELPASFLDPNRALILSCREYLCRNW-DCKLQLILREANSCANWLAAHCENQPLGSLA 301
+ L P L+L + + ++ C+ RE N A+ +A+ N PL +
Sbjct: 162 QALREENFRYAPLGGLLLEAKNIITSSFVSCQFSYCPRECNKVADAIASIGCNSPLNTDL 221
Query: 302 VFDTPP 307
V+D P
Sbjct: 222 VWDGVP 227
>gi|357494503|ref|XP_003617540.1| hypothetical protein MTR_5g092730 [Medicago truncatula]
gi|355518875|gb|AET00499.1| hypothetical protein MTR_5g092730 [Medicago truncatula]
Length = 153
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 167 WVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWE 226
++K N + + A G +VR+ G+ ++ +G + L S+L + LNL+ E
Sbjct: 46 YIKSNCDSAVCNLGNDAAIGSLVRNGDGQ----FNAFIGACSFLESKLQTILTWLNLIIE 101
Query: 227 RGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL 266
G+ KV++E +S A K ++L P+ +++ + L
Sbjct: 102 NGYSKVMIEFDSLIATKLIQLRCVSNHPHFKIVVGIKSML 141
>gi|218184766|gb|EEC67193.1| hypothetical protein OsI_34068 [Oryza sativa Indica Group]
Length = 243
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 4/186 (2%)
Query: 124 ISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSA 183
++S S K V+ +++ E +R + W P +K+N++G+
Sbjct: 44 VASVLAFSVQKQVDELLNLALQQRREHKNRTVKK--WTQPAAEVLKINVDGAFKHQLLLG 101
Query: 184 GAGGIVRDESGKWI-LGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAV 242
G G ++RD I G + ++ +E+ A GL G + +E +S +
Sbjct: 102 GWGYVIRDVGAHVIQAGAGSSSRMQDAFHAEVMAGVKGLQAAANLGMANIQLESDSLTLI 161
Query: 243 KCLELPASFLDPNRALILSCREYLCRNW-DCKLQLILREANSCANWLAAHCENQPLGSLA 301
+ L P L+L + + ++ C+ RE N A+ +A+ N PL +
Sbjct: 162 QALREENFRYAPLGGLLLEAKNIITSSFVSCQFSYCPRECNKVADAIASIGCNSPLNTDL 221
Query: 302 VFDTPP 307
V+D P
Sbjct: 222 VWDGVP 227
>gi|428216220|ref|YP_007089364.1| ribonuclease HI [Oscillatoria acuminata PCC 6304]
gi|428004601|gb|AFY85444.1| ribonuclease HI [Oscillatoria acuminata PCC 6304]
Length = 135
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 167 WVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWE 226
++ + +G+S R G AGAG ++ DE G + K LG + + +E A GL +
Sbjct: 2 YITIYSDGASRRNPGPAGAGAVLLDEQGNILNKVCKYLGETTNNQAEYQAAILGLETALK 61
Query: 227 RGFRKVLVECNSHEAVKCL 245
G +V + +S VK L
Sbjct: 62 MGATRVKLRADSELMVKQL 80
>gi|110288963|gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 149 EKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTS 207
EK R W PP N+VK+N +G+ S G G ++RD++G + G
Sbjct: 1358 EKSPRTGECAVWRRPPLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQ 1417
Query: 208 NSLASELWALYHGLNLVWERGFRKVLVECNS 238
++ +E+ A + ERG ++ +E +S
Sbjct: 1418 DAFHAEVVACAAAIKTASERGMSRIELETDS 1448
>gi|20279456|gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 149 EKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTS 207
EK R W PP N+VK+N +G+ S G G ++RD++G + G
Sbjct: 1362 EKSPRTGECAVWRRPPLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQ 1421
Query: 208 NSLASELWALYHGLNLVWERGFRKVLVECNS 238
++ +E+ A + ERG ++ +E +S
Sbjct: 1422 DAFHAEVVACAAAIKTASERGMSRIELETDS 1452
>gi|297851216|ref|XP_002893489.1| hypothetical protein ARALYDRAFT_335919 [Arabidopsis lyrata subsp.
lyrata]
gi|297339331|gb|EFH69748.1| hypothetical protein ARALYDRAFT_335919 [Arabidopsis lyrata subsp.
lyrata]
Length = 177
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTSNSLASELWALY 218
W P W+K N + + +G G I+RD G ++ G+ K G + +E AL
Sbjct: 42 WTKPERRWIKCNYDAAHREGNDISGLGWIIRDSHGTFLHCGWGKFQGRVSPEEAECSALI 101
Query: 219 HGLNLVWERGFRKVLVE 235
+ W G+R V+ E
Sbjct: 102 WAIQATWALGYRTVVFE 118
>gi|387169510|gb|AFJ66171.1| hypothetical protein 11M19.15 [Arabidopsis halleri]
Length = 231
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
+ +G+S G +GA +++ E G + + LG + + A+E L GL E+G+
Sbjct: 131 IEFDGASKGNPGLSGAAAVLKTEDGSLVCKMRQGLGIATNNAAEYHGLILGLKHAIEKGY 190
Query: 230 RKVLVECNSHEAVKCLELPASFLDPN 255
K+ V+ +S + C+++ S + N
Sbjct: 191 TKIKVKTDSK--LVCMQVRLSLCNKN 214
>gi|218199235|gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indica Group]
Length = 561
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 149 EKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTS 207
EK R W PP N+VK+N +G+ S G G +++D++G + G
Sbjct: 387 EKSPRTGECAVWRRPPLNFVKINTDGAYSSNMKQGGWGFVIKDQTGAVLQAGAGPAAYLQ 446
Query: 208 NSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLC 267
++ +E+ A + ERG ++ +E +S ++ + L +IL + +
Sbjct: 447 DAFHAEVVACAAAIKTASERGMSRIELETDSMMLRYAIQDNSFNLSSLGGVILEIKHIIL 506
Query: 268 RNWDC-KLQLILREANSCANWLAAH-CENQPLGSLAVFDTPPYALAPIFQKDSTGIV 322
+ + R N A+ LAA+ C Q + S A PP L + DS G+V
Sbjct: 507 SCFHSFSVSYSPRSCNKVAHELAAYGCNLQTVSSWA--GCPP-GLERLVSSDSAGLV 560
>gi|117166010|dbj|BAF36312.1| hypothetical protein [Ipomoea trifida]
Length = 76
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 258 LILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKD 317
LI CR + K+ ILRE N A++LA +N G+ + D PP L + +D
Sbjct: 8 LISDCRALMRDFRSIKITHILREGNQSADFLANLGQNSDWGT-TILDDPPEGLRELLVRD 66
Query: 318 STGIVQTR 325
S G+ +R
Sbjct: 67 SHGVAASR 74
>gi|312126659|ref|YP_003991533.1| ribonuclease h [Caldicellulosiruptor hydrothermalis 108]
gi|311776678|gb|ADQ06164.1| ribonuclease H [Caldicellulosiruptor hydrothermalis 108]
Length = 199
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 11/131 (8%)
Query: 172 IEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRK 231
+G+S G AGAG ++ + +G IL YSK LG + +E AL L E G ++
Sbjct: 6 FDGASKGNPGPAGAGIVIVNPAGNVILEYSKELGIKTNNEAEYLALIELLQKALELGIKE 65
Query: 232 VLVECNSHEAVKC------LELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCA 285
+ + +S + + +P + AL E L + K + I RE N A
Sbjct: 66 LEILGDSQLVINQVFGSWNINMPHLY-----ALYEQATELLEKFDKVKAKWIPREKNQLA 120
Query: 286 NWLAAHCENQP 296
+ L+ +P
Sbjct: 121 DSLSNKAITRP 131
>gi|224069346|ref|XP_002302961.1| predicted protein [Populus trichocarpa]
gi|222844687|gb|EEE82234.1| predicted protein [Populus trichocarpa]
Length = 406
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 162 PPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGL 221
PP TN K N++GSS G +G GG++R+ G + +S ++G +S +EL A+ +
Sbjct: 262 PPMTNRFKWNVDGSSIEKPGPSGIGGVLRNHHGILLGIFSLSVGILDSNVAELRAVIKAI 321
Query: 222 NLVWERGF---RKVLVECNSHEAVKCLE 246
L F + +++E +S + +
Sbjct: 322 ELSASNCFLHHKHIIIESDSANVISWMN 349
>gi|255551342|ref|XP_002516717.1| hypothetical protein RCOM_1724280 [Ricinus communis]
gi|223544090|gb|EEF45615.1| hypothetical protein RCOM_1724280 [Ricinus communis]
Length = 140
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 197 ILGYSKNLGTSN-SLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPN 255
++ + L ++N SL E +GL L W G ++VL+E ++ V L +
Sbjct: 2 VMAKASCLASANTSLEPESTVCLYGLRLAWLSGHKQVLMEVDNQLVVDVLSEKVAPSRQY 61
Query: 256 RALILSCREYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQ 315
+L + L NW ++ REAN CA+ LA + LG V PP + +
Sbjct: 62 LSLHSEIVKMLGWNWIVRINHSFREANRCADCLANTGHSFALG-YHVLQAPPDQVVQLLF 120
Query: 316 KDSTG 320
+D+ G
Sbjct: 121 QDNVG 125
>gi|390954345|ref|YP_006418103.1| protease subunit of ATP-dependent protease [Aequorivita
sublithincola DSM 14238]
gi|390420331|gb|AFL81088.1| protease subunit of ATP-dependent protease [Aequorivita
sublithincola DSM 14238]
Length = 181
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 34/169 (20%)
Query: 6 DTKYFLWGVFRDVKSNHILHE-------SHRELPSLV-SAMEYVCDGPAAMDNAEVTDMV 57
+ K FLWG+ D + H++ SH E+ + S YV G + D
Sbjct: 18 ERKVFLWGMVDDKSARHVVDRLMYLDALSHDEIKFYINSPGGYVTSGFSIYDTMR----- 72
Query: 58 VDMEGGKIVGPVDVV---VSKELYGKACGSHEKGD--VNPATETMLSEPKQGQKSNSSDL 112
+I PV + ++ + + EKG + P M+ +P G + +SD+
Sbjct: 73 ------EIKSPVSTICTGLAASMGSILLSAGEKGKRFIQPHARVMIHQPSGGARGVASDI 126
Query: 113 FTGRSEKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWM 161
E +K K SAR L++ +C FEK+ + +R WM
Sbjct: 127 EITAQEILKTKEISARILAE----------NCGQKFEKVMKDFNRDHWM 165
>gi|124360982|gb|ABN08954.1| Ribonuclease H [Medicago truncatula]
Length = 175
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 162 PPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGL 221
P VK+N++GS+ A GG+ R+ + G+++N+G + +EL A +
Sbjct: 5 PAVQGRVKINLDGSAFGAPSCGATGGVFRNWQTHSLGGFAQNIGHATCFKAELCAAIFAI 64
Query: 222 NLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREA 281
E R + +E +S VK R +C L + C I RE
Sbjct: 65 EKSIEYNLRDIWLETDSKLVVKAFSSSEHVPWQLRTRWNNCLA-LAQKIKCVCTHIHREG 123
Query: 282 NSCANWLAAHCENQPLGSLAVFDTPPYALAPIF 314
N+ A+ LA + + SLA+ + ++ +P+F
Sbjct: 124 NAGADSLAKNGK-----SLALLTSQWWSSSPLF 151
>gi|357481721|ref|XP_003611146.1| hypothetical protein MTR_5g010810 [Medicago truncatula]
gi|355512481|gb|AES94104.1| hypothetical protein MTR_5g010810 [Medicago truncatula]
Length = 160
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 204 LGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCR 263
G SN+L EL + HGL L WE G R V+ +S A+ +++P + ++ + +
Sbjct: 72 FGISNNLHVELLGIMHGLKLTWEIGHRNVICYFDSLHAINLIQVPLNAWHFYATIVKNVK 131
Query: 264 EYLCRNWDCKL 274
+ L W+ ++
Sbjct: 132 DLLNLPWNVQV 142
>gi|242093158|ref|XP_002437069.1| hypothetical protein SORBIDRAFT_10g020790 [Sorghum bicolor]
gi|241915292|gb|EER88436.1| hypothetical protein SORBIDRAFT_10g020790 [Sorghum bicolor]
Length = 473
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 146 PGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL-GYSKNL 204
P + I R W PPT +K+N++G+ + G G ++RDE G+ I G + +
Sbjct: 399 PKVQAIRR------WEQPPTGLLKVNVDGAFRDLDKNGGWGYVIRDERGEVIQSGLGRIM 452
Query: 205 GTSNSLASELWALYHG 220
T+NSL + L A G
Sbjct: 453 YTANSLYTRLMACLEG 468
>gi|15226275|ref|NP_180979.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|3337363|gb|AAC27408.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
gi|91805481|gb|ABE65469.1| hypothetical protein At2g34320 [Arabidopsis thaliana]
gi|330253864|gb|AEC08958.1| RNase H domain-containing protein [Arabidopsis thaliana]
Length = 292
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 155 NSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASE 213
N + W PP WVK N + + G G I+R+ESG + ++ L T N L +E
Sbjct: 132 NLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAE 191
Query: 214 LWALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
L AL + + +++++ E ++ V L
Sbjct: 192 LEALRWAVLTMSRFNYKRIIFESDAQALVNLL 223
>gi|357479099|ref|XP_003609835.1| Protease IV [Medicago truncatula]
gi|355510890|gb|AES92032.1| Protease IV [Medicago truncatula]
Length = 627
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 182 SAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEA 241
S G GG+V + G WI +S ++L +EL A+ GL+ ++G+ ++ E +
Sbjct: 6 STGVGGVVHNHDGDWIADFSHYEAEGDALLAELRAIQIGLDFCVKKGYVNIICESD---- 61
Query: 242 VKCLELPASFLDPNRALILSCR 263
CLE P + R +L R
Sbjct: 62 --CLE-PIDLIIVGRDHMLHIR 80
>gi|357153109|ref|XP_003576341.1| PREDICTED: uncharacterized protein LOC100830352 [Brachypodium
distachyon]
Length = 265
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKW-------ILGYSKNLGTSNSLAS 212
W+PPP+ K+N++ +R+ + RDE+GK+ ILG + +
Sbjct: 133 WIPPPSGACKINVDAGLARSGAGGALAAVCRDENGKFLAASTVTILGMTAPTTLEAMACN 192
Query: 213 ELWALYHGLNL 223
E +L H LNL
Sbjct: 193 EALSLAHDLNL 203
>gi|357481267|ref|XP_003610919.1| hypothetical protein MTR_5g008510 [Medicago truncatula]
gi|355512254|gb|AES93877.1| hypothetical protein MTR_5g008510 [Medicago truncatula]
Length = 158
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 34/64 (53%)
Query: 183 AGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAV 242
+ G RD G+++ G+ N+ SN L +E+ A+ +G+ + W+ G R ++ + +
Sbjct: 54 SNPGRPTRDFDGQFMCGFHGNIDYSNILHAEILAIMYGIQICWDEGLRDIICYTDFMHTI 113
Query: 243 KCLE 246
++
Sbjct: 114 HLVQ 117
>gi|116830497|gb|ABK28206.1| unknown [Arabidopsis thaliana]
Length = 293
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 155 NSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASE 213
N + W PP WVK N + + G G I+R+ESG + ++ L T N L +E
Sbjct: 132 NLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAE 191
Query: 214 LWALYHGLNLVWERGFRKVLVECNSHEAVKCL 245
L AL + + +++++ E ++ V L
Sbjct: 192 LEALRWAVLTMSRFNYKRIIFESDAQALVNLL 223
>gi|406904481|gb|EKD46245.1| ribonuclease HI [uncultured bacterium]
Length = 136
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 181 GSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHE 240
G A G I++D++GK + SK LG + + +E AL GL + ++G + V +S
Sbjct: 15 GRAATGIIIKDQTGKTLYRLSKYLGIATNNQAEYAALIQGLKFLTQKGIKIVACYLDSEL 74
Query: 241 AVKCL 245
V+ L
Sbjct: 75 VVRQL 79
>gi|356526860|ref|XP_003532034.1| PREDICTED: uncharacterized protein LOC100779114 [Glycine max]
Length = 356
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
+ +G+S G AGAG I+R G I + +G + + A+E A+ G+ ++GF
Sbjct: 220 VEFDGASKGNPGKAGAGAILRANDGSLICRVREGVGIATNNAAEYRAMILGMKYALKKGF 279
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALIL---SCREYLCRNWDCKLQLILREANSCAN 286
+ ++ +S + C+++ S+ N L +E + ++ +LR NS A+
Sbjct: 280 TGICIQGDSK--LVCMQIDGSWKVKNENLFTLYNVAKELKDKFSSFQISHVLRNFNSDAD 337
Query: 287 WLA 289
A
Sbjct: 338 AQA 340
>gi|222618468|gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
Length = 639
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 6/177 (3%)
Query: 149 EKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTS 207
EK R W PP N+VK+N +G+ S G G ++RD++G + G
Sbjct: 387 EKSPRTGECAVWRRPPLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQ 446
Query: 208 NSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLC 267
++ +E+ A + ERG ++ +E +S ++ + L +IL + +
Sbjct: 447 DAFHAEVVACAAAIKTASERGMSRIELETDSMMLRYAIQDNSFNLSSLGGVILEIKHIIL 506
Query: 268 RNWDC-KLQLILREANSCANWLAAH-CENQPLGSLAVFDTPPYALAPIFQKDSTGIV 322
+ + R N A+ LAA+ C Q + S A PP L + DS G +
Sbjct: 507 SCFHSFSVSYSPRSCNKVAHELAAYGCNLQTVSSWA--GCPP-GLERLVSSDSAGYL 560
>gi|218186859|gb|EEC69286.1| hypothetical protein OsI_38338 [Oryza sativa Indica Group]
Length = 59
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL 198
I W P W+KLN++GS G+ G G I+R+ SG+ I
Sbjct: 11 IPWTKPGMGWMKLNVDGSYDATVGTGGIGAILRNSSGEVIF 51
>gi|4581111|gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1319
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 55/137 (40%), Gaps = 23/137 (16%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSL-----ASEL 214
W PPP +K NI + SR + AG ++RD G+ +L ++ SL S
Sbjct: 1155 WNPPPAGELKCNIGVAWSRQKQLAGVSWVLRDSMGQVLLHSRRSYSQVYSLFDAKIKSWD 1214
Query: 215 WAL-----YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRN 269
WAL +H F KV SH+ +K L P + LI E+L
Sbjct: 1215 WALESMDHFH---------FDKVTFAATSHDIIKALHKPNEW----PMLIGHIAEFLSFT 1261
Query: 270 WDCKLQLILREANSCAN 286
D ++ E+ C N
Sbjct: 1262 KDISDWFMMMESTQCNN 1278
>gi|3779023|gb|AAC67202.1| hypothetical protein [Arabidopsis thaliana]
Length = 117
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 6/118 (5%)
Query: 208 NSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLC 267
S EL +G WE + +E +S V L+ S P L+ C L
Sbjct: 2 GSATGELAETKYGWRFSWE-----LELEIDSALVVDFLKTGISETHPLSFLVRLCYGLLS 56
Query: 268 RNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQTR 325
++W ++ + REAN A+ LA + + PLG L +FD+ P + +D G R
Sbjct: 57 KDWLVRISHVYREANQLADGLANYAFSLPLG-LHLFDSCPDCMLHCLAEDDRGAAHPR 113
>gi|357136478|ref|XP_003569831.1| PREDICTED: uncharacterized protein LOC100841843 [Brachypodium
distachyon]
Length = 109
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 168 VKLNIEGSSSRAQGSAGA-GGIVRDESGKWILGYSKNL-GTSNSLASELWALYHGLNLVW 225
VKL++ G+S R + +GA G +VRD G ++ S L + L +E +AL HGL L
Sbjct: 2 VKLDV-GASFRLESCSGATGAVVRDAKGFFLAASSHLLPQVRDVLTAEAFALLHGLQLAD 60
Query: 226 ERGFRKVLVECNSHEAVKCLELPA-----SFLDPNRALI 259
G +VLV ++ ++ ++ A S L + A+I
Sbjct: 61 HLGCSRVLVNSDNSSLMEAMQAAAPTCAYSLLASHEAII 99
>gi|79330550|ref|NP_001032054.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|222424272|dbj|BAH20093.1| AT5G51080 [Arabidopsis thaliana]
gi|332008649|gb|AED96032.1| RNase H domain-containing protein [Arabidopsis thaliana]
Length = 259
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
+ +G+S G +GA +++ E G I + LG + + A+E L GL E+G+
Sbjct: 125 IEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEKGY 184
Query: 230 RKVLVECNSHEAVKCLEL 247
K+ V+ +S + C+++
Sbjct: 185 TKIKVKTDSK--LVCMQM 200
>gi|357515223|ref|XP_003627900.1| hypothetical protein MTR_8g039760 [Medicago truncatula]
gi|355521922|gb|AET02376.1| hypothetical protein MTR_8g039760 [Medicago truncatula]
Length = 60
Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 183 AGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFR 230
AG GG++RD SG+ I GY K + T + E+W + H +L++E +
Sbjct: 7 AGCGGLLRDYSGRLIKGYFKKIETCDVFHGEIWGM-HTAHLIFESDLK 53
>gi|326488477|dbj|BAJ93907.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+ G +GAG +VR G I + LG + + A+E AL GL ++GF
Sbjct: 127 LEFDGACKGNPGKSGAGVVVRRSDGAMIAQLREGLGIATNNAAEYRALLLGLRYAAKKGF 186
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRA-LILSCREYLCRNWDCKLQLILREANSCANWL 288
+ V + +S ++ + N A L ++ ++ +LRE N+ A+
Sbjct: 187 KYVRAQGDSKLVCNQVQDLWRVRNDNMADLCKKVKDLKGSFLQFQINHVLREFNADADAQ 246
Query: 289 AAHCENQPLGSL 300
A P+G +
Sbjct: 247 ANFAVELPVGEI 258
>gi|224066841|ref|XP_002302241.1| predicted protein [Populus trichocarpa]
gi|222843967|gb|EEE81514.1| predicted protein [Populus trichocarpa]
Length = 347
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 183 AGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAV 242
G GG++RDE W+ + +G + +EL A+ GL L W +V V +S EA+
Sbjct: 290 GGMGGLIRDEEDPWLHDF---IGRKTIMEAELQAIRLGLELTWSLDRDQVTVTTDSFEAL 346
>gi|449452100|ref|XP_004143798.1| PREDICTED: uncharacterized protein LOC101210930 [Cucumis sativus]
Length = 373
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+S G AGAG ++R G I + LG + + +E A+ GL ++GF
Sbjct: 237 LEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGF 296
Query: 230 RKVLVECNS 238
++ V+ +S
Sbjct: 297 TRIHVQGDS 305
>gi|255576948|ref|XP_002529359.1| conserved hypothetical protein [Ricinus communis]
gi|223531179|gb|EEF33026.1| conserved hypothetical protein [Ricinus communis]
Length = 143
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSK 202
W PP++ +KLN++G+ + QG G G I+R+ G+ + SK
Sbjct: 73 WSTPPSSMLKLNVDGALFKDQGFGGLGAIIRNHEGRELYCLSK 115
>gi|357482787|ref|XP_003611680.1| hypothetical protein MTR_5g016650 [Medicago truncatula]
gi|355513015|gb|AES94638.1| hypothetical protein MTR_5g016650 [Medicago truncatula]
Length = 157
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 22/136 (16%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAG----AGGIVRDESGKWILGYSKNLGTSNSLASE 213
I W LN++ ++ G AG GG++RD + K++ G+ L
Sbjct: 13 IAWQRSQAGSYILNVDDNAQTNSGMAGWMADFGGLIRDSNDKFMYGFYTKL--------- 63
Query: 214 LWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCK 273
+ W+ G ++ +S L+ F I ++Y+ ++W+ +
Sbjct: 64 ---------ICWDEGLNDIVCYIDSMHTFHLLQQVNVFTHQYGNEIAIIKKYMVKDWEYQ 114
Query: 274 LQLILREANSCANWLA 289
L R+ + +N+LA
Sbjct: 115 LCYTFRKEDMYSNYLA 130
>gi|334182806|ref|NP_173819.2| RNase H domain-containing protein [Arabidopsis thaliana]
gi|332192355|gb|AEE30476.1| RNase H domain-containing protein [Arabidopsis thaliana]
Length = 353
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
+ +G+S G +GA +++ E G I + LG + + A+E AL GL E+G+
Sbjct: 219 IEFDGASKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATNNAAEYHALILGLKYAIEKGY 278
Query: 230 RKVLVECNS 238
+ + V+ +S
Sbjct: 279 KNIKVKGDS 287
>gi|326499834|dbj|BAJ90752.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 347
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+ G +GAG +VR G I + LG + + A+E AL GL ++GF
Sbjct: 208 LEFDGACKGNPGKSGAGVVVRRSDGAMIAQLREGLGIATNNAAEYRALLLGLRYAAKKGF 267
Query: 230 RKVLVECNS 238
+ V + +S
Sbjct: 268 KYVRAQGDS 276
>gi|242092228|ref|XP_002436604.1| hypothetical protein SORBIDRAFT_10g005555 [Sorghum bicolor]
gi|241914827|gb|EER87971.1| hypothetical protein SORBIDRAFT_10g005555 [Sorghum bicolor]
Length = 90
Score = 40.0 bits (92), Expect = 1.7, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 163 PPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASELWALYHGL 221
P W K+N + G+ +G ++RD SG I ++ G + L++E A GL
Sbjct: 2 PEEGWAKVNTDAGFDAENGTGRSGVVIRDHSGAVIGAAARWFEGVQDVLSAEALAAKEGL 61
Query: 222 NLVWERGFRKVLVECNSHEAVK 243
L E G +V++E + +K
Sbjct: 62 ELAVELGLPRVILELDCQSLMK 83
>gi|5001454|gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 149 EKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDE---------SGKWILG 199
++I + ++ W P WVKLN +G+S G A AGG +RDE S W++
Sbjct: 653 KEIVQVERQVSWRKPNEGWVKLNTDGASHGNPGEATAGGALRDEEVRLCYGFLSRDWLVR 712
Query: 200 YSKNLGTSNSLASEL 214
S +N LA L
Sbjct: 713 VSHVYREANRLADGL 727
>gi|357471815|ref|XP_003606192.1| 3-ketoacyl-CoA synthase [Medicago truncatula]
gi|355507247|gb|AES88389.1| 3-ketoacyl-CoA synthase [Medicago truncatula]
Length = 468
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
I W PP W++LN +G+S Q +AG GG+ RD W + + +N+ A +
Sbjct: 207 IRWWPPDFGWIRLNTDGASKGGQ-NAGCGGVFRD----WEVQVRHSFREANACADVM--- 258
Query: 218 YHGLNLVWERGFRKVLVE 235
N+ E GF +L E
Sbjct: 259 ---ANMACESGFSLILYE 273
>gi|242091139|ref|XP_002441402.1| hypothetical protein SORBIDRAFT_09g025980 [Sorghum bicolor]
gi|241946687|gb|EES19832.1| hypothetical protein SORBIDRAFT_09g025980 [Sorghum bicolor]
Length = 310
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL-GYSKNLGTSNSLASELWALY 218
W P P + +K+N +G+ S + S G ++R+ G I GY K S + +E+ A
Sbjct: 145 WSPLPEDVLKINCDGAFSASNRSGGWSFLIREWDGGVITSGYGKIERVSEAFHAEIVACL 204
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNR 256
L + G +K+++E ++ V+ L F D +R
Sbjct: 205 QALQRAADLGIQKIILETDASSIVQALR----FQDVDR 238
>gi|8843844|dbj|BAA97370.1| unnamed protein product [Arabidopsis thaliana]
Length = 316
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
+ +G+S G +GA +++ E G I + LG + + A+E L GL E+G+
Sbjct: 188 IEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEKGY 247
Query: 230 RKVLVECNSHEAVKCLEL 247
K+ V+ +S + C+++
Sbjct: 248 TKIKVKTDSK--LVCMQM 263
>gi|255556213|ref|XP_002519141.1| conserved hypothetical protein [Ricinus communis]
gi|223541804|gb|EEF43352.1| conserved hypothetical protein [Ricinus communis]
Length = 213
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 26/127 (20%)
Query: 156 SRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELW 215
S I W PP ++V LN +GS G+AG L+ +W
Sbjct: 94 SLISWSPPRDDYVVLNSDGSFKGVLGTAGG----------------------EELSEIIW 131
Query: 216 ALYHGLNLVWERGFRKVLVECNSHEAVKCL--ELPASFLDPNRALILSCREYLCRNWDCK 273
GL+L R FRK++++ + AVK L E + L N ++ +C + L +WD
Sbjct: 132 GNGLGLSLAQRRSFRKLIIQSDPLIAVKWLNKEFKCNSLHEN--MVNACLDLLELDWDVS 189
Query: 274 LQLILRE 280
+ I R+
Sbjct: 190 VVHIYRK 196
>gi|357466729|ref|XP_003603649.1| hypothetical protein MTR_3g110500 [Medicago truncatula]
gi|355492697|gb|AES73900.1| hypothetical protein MTR_3g110500 [Medicago truncatula]
Length = 132
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASEL 214
+ W PP NW+K N +GS+S + G I ++ +L S+NLG N+L +EL
Sbjct: 7 EVLWSPPLINWIKGNTDGSASTITSTCGI--IFKNCVADCLLCVSENLGPGNALRAEL 62
>gi|326505852|dbj|BAJ91165.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+ G +GAG +VR G I + LG + + A+E AL GL ++GF
Sbjct: 127 LEFDGACKGNPGKSGAGVVVRRSDGAMIAQLREGLGIATNNAAEYRALLLGLRYAAKKGF 186
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRA-LILSCREYLCRNWDCKLQLILREANSCANWL 288
+ V + +S ++ + N A L ++ ++ +LRE N+ A+
Sbjct: 187 KYVRAQGDSKLVCNQVQDLWRVRNDNMADLCKKVKDLKGSFLQFQINHVLREFNADADAQ 246
Query: 289 AAHCENQPLGSL 300
A P+G +
Sbjct: 247 ANFAVELPVGEI 258
>gi|77555714|gb|ABA98510.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 415
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 152 HRPN--SRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL 198
HR + I W P W+KLN++GS G+ G G I+R+ SG+ I
Sbjct: 359 HRKQEVTDIPWTKPGMGWMKLNVDGSYDATVGTGGIGAILRNSSGEVIF 407
>gi|357480555|ref|XP_003610563.1| hypothetical protein MTR_4g133590 [Medicago truncatula]
gi|355511618|gb|AES92760.1| hypothetical protein MTR_4g133590 [Medicago truncatula]
Length = 150
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 161 MPPPTNWVKLNIEGSSSRAQGSAGAGG-IVRDESGKWILGYS 201
+PP ++K+N++GSS G+AG GG I+ G WI G+S
Sbjct: 18 IPPVNTYLKVNVDGSSFDNLGNAGFGGLIINHHGGGWIQGFS 59
>gi|30695999|ref|NP_199921.2| RNase H domain-containing protein [Arabidopsis thaliana]
gi|79330542|ref|NP_001032053.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|29028872|gb|AAO64815.1| At5g51080 [Arabidopsis thaliana]
gi|110743039|dbj|BAE99412.1| hypothetical protein [Arabidopsis thaliana]
gi|222424417|dbj|BAH20164.1| AT5G51080 [Arabidopsis thaliana]
gi|332008647|gb|AED96030.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|332008648|gb|AED96031.1| RNase H domain-containing protein [Arabidopsis thaliana]
Length = 322
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
+ +G+S G +GA +++ E G I + LG + + A+E L GL E+G+
Sbjct: 188 IEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEKGY 247
Query: 230 RKVLVECNSHEAVKCLEL 247
K+ V+ +S + C+++
Sbjct: 248 TKIKVKTDSK--LVCMQM 263
>gi|357495339|ref|XP_003617958.1| hypothetical protein MTR_5g097380 [Medicago truncatula]
gi|355519293|gb|AET00917.1| hypothetical protein MTR_5g097380 [Medicago truncatula]
Length = 121
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 181 GSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKV 232
G+ G I + G+WI G+ K +G N+ +ELW GL+ V GFR V
Sbjct: 69 GACKGGNIAGNGDGEWIGGFVKYIGDCNAFVAELWGALEGLSYVRRMGFRAV 120
>gi|9369399|gb|AAF87147.1|AC002423_12 T23E23.24 [Arabidopsis thaliana]
Length = 360
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
+ +G+S G +GA +++ E G I + LG + + A+E AL GL E+G+
Sbjct: 210 IEFDGASKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATNNAAEYHALILGLKYAIEKGY 269
Query: 230 RKVLVECNS 238
+ + V+ +S
Sbjct: 270 KNIKVKGDS 278
>gi|357438143|ref|XP_003589347.1| Eukaryotic translation initiation factor 3 subunit C [Medicago
truncatula]
gi|355478395|gb|AES59598.1| Eukaryotic translation initiation factor 3 subunit C [Medicago
truncatula]
Length = 1087
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 55/140 (39%), Gaps = 9/140 (6%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTS-NSLASELWALY 218
W P +K N++ + G G RD G+++ G S L ++ +E L
Sbjct: 6 WTKPQHGVIKCNVDRALFNNNSLMGYGMCFRDSMGQFLFGKSNWLHYRVTTMEAEAIGLL 65
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
+ E+G V E + L LP + P+ L L + N D + +
Sbjct: 66 EAIKTAIEKGMHYVEFETDCKPVADALSLPTA---PHNELDL-----IANNSDYVVSFVP 117
Query: 279 REANSCANWLAAHCENQPLG 298
R+AN A+ +A + P G
Sbjct: 118 RQANKVAHSIARASLSNPSG 137
>gi|255537821|ref|XP_002509977.1| conserved hypothetical protein [Ricinus communis]
gi|223549876|gb|EEF51364.1| conserved hypothetical protein [Ricinus communis]
Length = 74
Score = 39.7 bits (91), Expect = 2.1, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 194 GKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLD 253
G WI N+ +N+ ELW LY GL L WE ++++VE ++ V +
Sbjct: 2 GGWIFHEHWNVSITNA---ELWGLYQGLLLAWELDIKQLVVEIDNASVVTMVNDMELVNG 58
Query: 254 PNRALILSCREYLCR 268
PN +L+ + + L R
Sbjct: 59 PNGSLVENIKRLLKR 73
>gi|116830577|gb|ABK28246.1| unknown [Arabidopsis thaliana]
Length = 107
Score = 39.7 bits (91), Expect = 2.2, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 223 LVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREAN 282
+ WE ++ +E +S V L S P L+ C ++ R+W ++ REAN
Sbjct: 1 MAWECKVSQLELEVDSEVVVGFLRTGISESHPLSFLVRMCYGFISRDWIVRISHKYREAN 60
Query: 283 SCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGI 321
A+ LA + + PLG F P A+ + +D G+
Sbjct: 61 RLADGLANYAFSLPLG-FQFFYVCPDAVYSVMLEDRNGM 98
>gi|91805575|gb|ABE65516.1| hypothetical protein At4g08860 [Arabidopsis thaliana]
Length = 106
Score = 39.7 bits (91), Expect = 2.2, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 223 LVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREAN 282
+ WE ++ +E +S V L S P L+ C ++ R+W ++ REAN
Sbjct: 1 MAWECKVSQLELEVDSEVVVGFLRTGISESHPLSFLVRMCYGFISRDWIVRISHKYREAN 60
Query: 283 SCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGI 321
A+ LA + + PLG F P A+ + +D G+
Sbjct: 61 RLADGLANYAFSLPLG-FQFFYVCPDAVYSVMLEDRNGM 98
>gi|357474693|ref|XP_003607631.1| hypothetical protein MTR_4g080450 [Medicago truncatula]
gi|355508686|gb|AES89828.1| hypothetical protein MTR_4g080450 [Medicago truncatula]
Length = 59
Score = 39.3 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 151 IHRPN----SRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVR 190
IH+P + W PPP +W+K NI+G+ A GGI R
Sbjct: 14 IHQPKDLFIKEVIWFPPPEHWIKGNIDGALINNSTIASVGGIFR 57
>gi|356565894|ref|XP_003551171.1| PREDICTED: uncharacterized protein LOC100809644 [Glycine max]
Length = 345
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
+ +G+S G AGAG I+R G I + +G + + A+E A+ G+ ++GF
Sbjct: 209 VEFDGASKGNPGKAGAGAILRANDGSLICRLREGVGIATNNAAEYRAMILGMKYALKKGF 268
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRAL 258
+ ++ +S + C+++ S+ N L
Sbjct: 269 TGIRIQGDSK--LVCMQIDGSWKVKNENL 295
>gi|108710545|gb|ABF98340.1| expressed protein [Oryza sativa Japonica Group]
Length = 718
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASELWALY 218
W PPP V +N + + ++ G G ++RD G+ +L ++ + + +E A+
Sbjct: 643 WTPPPVGTVMINCDAALFQSSCQMGIGFLIRDHDGRCLLALNERVQNVTQPELAEAVAIR 702
Query: 219 HGLNLVWERGFRK 231
L+L E G++K
Sbjct: 703 RALSLAKEEGYQK 715
>gi|77556102|gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1188
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNS-LASELWALY 218
W PP+ W+KLN++G S + I+R+ +G I + S L +E+ A
Sbjct: 1029 WEKPPSGWMKLNVDG-SYQEDNIGEISAILRNSTGDVIFAACGFVEQCQSALEAEILACK 1087
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
G+ L + +++E + EA++ + N+ L+ + + + KL+ +
Sbjct: 1088 EGIGLALQWTLLPIIIESDCAEALQLILSEGKLRSVNKFLVREIQGMVKGAREMKLKKVN 1147
Query: 279 REANSCANWLA--AHCEN 294
R N ++ LA CE+
Sbjct: 1148 RNCNHISHVLANKGRCES 1165
>gi|285026156|dbj|BAI67988.1| hypothetical protein [Oryza sativa Indica Group]
gi|374277648|gb|AEZ03754.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
gi|374277660|gb|AEZ03765.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
Length = 317
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 128 RPLSKGKLVNSMIDADCPPGFEKIHRPNSRIC-WMPPPTNWVKLNIEGSSSRAQGSAGAG 186
+PL +LV+ +I + P E P++ + W P W+KLN +G+ + G AGAG
Sbjct: 221 QPLRSVELVDELIKSLEIPAQED---PSAVVQKWARPALGWMKLNTDGALNLQDGVAGAG 277
Query: 187 GIVRDESGKWI 197
+ RD +G ++
Sbjct: 278 IVARDNTGNFV 288
>gi|53370733|gb|AAU89228.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108708730|gb|ABF96525.1| hypothetical protein LOC_Os03g29330 [Oryza sativa Japonica Group]
Length = 203
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGK 195
P + W PP W+KLNI+GS + G G I+ D +GK
Sbjct: 79 PKPLLRWERPPVGWMKLNIDGSFDSSAEKGGVGAILWDSAGK 120
>gi|125579912|gb|EAZ21058.1| hypothetical protein OsJ_36702 [Oryza sativa Japonica Group]
Length = 252
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 16/180 (8%)
Query: 116 RSEKIKFKISSARPLSKGKLVNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGS 175
RS I +S+ R LS+ V S + + N+ W PP +K+N +G+
Sbjct: 79 RSSSIMRDMSTRRALSRRNTVQS---------GRSVRKGNT---WKAPPLGILKINFDGA 126
Query: 176 SSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASELWALYHGLNLVWERGFRKVLV 234
+ ++R E+G+ +L S L S++L +E A + G +V++
Sbjct: 127 YREMSRDGASCFVIRGENGQGVLAGSGRLPMVSDALMAEAEACLAAHEAAIDHGISQVII 186
Query: 235 ECNSHEAVKCLELPASFLDPNRALILSCREYLCRNW--DCKLQLILREANSCANWLAAHC 292
E + V L+ F R ++ L + ++ + R N+CA+ LA C
Sbjct: 187 ESDCLNLVSALK-SDEFDRSARGIVFRELRLLLSMYFIVTDIRHVRRSCNACADALAQVC 245
>gi|218187612|gb|EEC70039.1| hypothetical protein OsI_00625 [Oryza sativa Indica Group]
Length = 469
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSL-ASELWA 216
+CW+ W K+N++G+ + G+ G ++R+ G+ +L K L S +EL A
Sbjct: 257 VCWLMSVNGWAKINVDGAFNPENGNGALGLVIRNSRGEVLLSSWKFLRRCVSAEEAELLA 316
Query: 217 LYHGLNLVWERGFRKVLVECNSHEAVKCL 245
Y GL L E V++E + A+ L
Sbjct: 317 CYEGLKLAAEWIPMPVMLEYDCATAIARL 345
>gi|222616495|gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japonica Group]
Length = 1395
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 3/156 (1%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL--GTSNSLASEL 214
R W PP V +N++ G G ++RD SG +L + + ++ +E
Sbjct: 694 RQGWKKPPEGKVMVNVDAGFDEMGGCGTVGSVIRDCSGG-VLAAAHSFVPHLVDAPMAEA 752
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKL 274
+AL GL L + G +++++ + E V+ + + A+ C D +
Sbjct: 753 FALKEGLMLAQQIGCNRLIIQSDCMEVVQIMTDGGFTANSAAAIYEDCNILWSGFADITI 812
Query: 275 QLILREANSCANWLAAHCENQPLGSLAVFDTPPYAL 310
+ REAN A+ LA G F +A+
Sbjct: 813 EHCSREANQVAHNLARRAREWRRGLRGAFTNCKFAM 848
>gi|222637128|gb|EEE67260.1| hypothetical protein OsJ_24426 [Oryza sativa Japonica Group]
Length = 185
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 23/173 (13%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNSLASELWALY 218
W PPP +KLN++ + + + G G ++RDE G +L + L + +++E A
Sbjct: 19 WAPPPAGKIKLNVDAAYQANRKTGGWGFVLRDEEGHALLAGAGRLEFVHDVVSAEARACL 78
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
L + +G +V +E +S V + +S A I + + K+ L L
Sbjct: 79 SALLAISVQGVTEVEIESDSAILVSAVT-SSSHSQAVGATIFA---------EIKMLLQL 128
Query: 279 REANSCANWLAAHCEN------------QPLGSLAVFDTPPYALAPIFQKDST 319
ANS ++ C N P S+ D PY + + +D T
Sbjct: 129 HFANSKVSFAPRSCNNVAHNLAKIGVSWDPDQSVVWVDPLPYFVRTLVIRDRT 181
>gi|218186284|gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indica Group]
Length = 1546
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 3/156 (1%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL--GTSNSLASEL 214
R W PP V +N++ G G ++RD SG +L + + ++ +E
Sbjct: 845 RQGWKKPPEGKVMVNVDAGFDEMGGCGTVGSVIRDCSGG-VLAAAHSFVPHLVDAPMAEA 903
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKL 274
+AL GL L + G +++++ + E V+ + + A+ C D +
Sbjct: 904 FALKEGLMLAQQIGCNRLIIQSDCMEVVQIMTDGGFTANSAAAIYEDCNILWSGFADITI 963
Query: 275 QLILREANSCANWLAAHCENQPLGSLAVFDTPPYAL 310
+ REAN A+ LA G F +A+
Sbjct: 964 EHCSREANQVAHNLARRAREWRRGLRGAFTNCKFAM 999
>gi|226532456|ref|NP_001145250.1| uncharacterized protein LOC100278534 [Zea mays]
gi|195653679|gb|ACG46307.1| hypothetical protein [Zea mays]
Length = 276
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+ G +GAG I+R G I + LG + A+E AL GLN ++GF
Sbjct: 140 LEFDGACKGNPGKSGAGVIIRRLDGSVIAVLREGLGIMTNNAAEYRALILGLNYASKKGF 199
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSC---REYLCRNWDCKLQLILREANSCAN 286
+ + C + C ++ ++ + + + C +E ++ +LRE NS A+
Sbjct: 200 K--YIRCQGDSKLVCNQVQGAWRARSDNMSILCDIAKELKETFLTFQINHVLREFNSDAD 257
Query: 287 WLA 289
A
Sbjct: 258 VQA 260
>gi|297795913|ref|XP_002865841.1| hypothetical protein ARALYDRAFT_357356 [Arabidopsis lyrata subsp.
lyrata]
gi|297311676|gb|EFH42100.1| hypothetical protein ARALYDRAFT_357356 [Arabidopsis lyrata subsp.
lyrata]
Length = 322
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
+ +G+S G +GA +++ E G I + LG + + A+E L GL E+G+
Sbjct: 194 IEFDGASKGNPGLSGAAAVLKTEDGSLICKMRQGLGIATNNAAEYHGLILGLKHAIEKGY 253
Query: 230 RKVLVECNSHEAVKCLEL 247
K+ V+ +S + C+++
Sbjct: 254 TKIKVKTDSK--LVCMQM 269
>gi|242091794|ref|XP_002436387.1| hypothetical protein SORBIDRAFT_10g001650 [Sorghum bicolor]
gi|241914610|gb|EER87754.1| hypothetical protein SORBIDRAFT_10g001650 [Sorghum bicolor]
Length = 338
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 146 PGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI---LGYSK 202
P + I R W PPT +K+N++G+ + G ++RDE G I LG
Sbjct: 223 PKIQAIRRR-----WEKPPTGLLKVNVDGAFRDLDKNGGWRYVIRDERGVVIQSSLGRIT 277
Query: 203 NLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSH 239
N +NSL +EL A G +V G + ++E +++
Sbjct: 278 N--AANSLYTELMACLEGAKVVLSMGASRFILETDAN 312
>gi|11994220|dbj|BAB01342.1| unnamed protein product [Arabidopsis thaliana]
Length = 138
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 207 SNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLD---PNRALILSCR 263
S SLA EL +Y+GL L WE+ ++ VE +S V L ++ P L+ C
Sbjct: 15 SISLA-ELRGVYYGLYLTWEKKIMRLEVEVDSEVVVGFLTTGIEEIEETNPLSILVRLCH 73
Query: 264 EYLCRNWDCKLQLILREANSCANWLAAHCENQPLGSLAVFDTPPYALAPIFQKDSTGIVQ 323
+L ++ ++ + R+AN + L H + LG A F + P + I ++D G+++
Sbjct: 74 GFLRKDSIVRVSHVYRKANRLTDGLTNHAFSLLLGFHA-FASVPVEVVSILREDVDGVLR 132
Query: 324 TR 325
+R
Sbjct: 133 SR 134
>gi|255588182|ref|XP_002534525.1| nuclease, putative [Ricinus communis]
gi|223525106|gb|EEF27855.1| nuclease, putative [Ricinus communis]
Length = 262
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+S G AGAG ++R G+ I + LG + +E A+ G+ ++G+
Sbjct: 123 LEFDGASKGNPGPAGAGALLRTTDGRIICRLREGLGQVTNNVAEYRAMILGMKYALKKGY 182
Query: 230 RKVLVECNS 238
K+ V+ +S
Sbjct: 183 TKIRVQGDS 191
>gi|357513597|ref|XP_003627087.1| Beta-amyrin synthase [Medicago truncatula]
gi|355521109|gb|AET01563.1| Beta-amyrin synthase [Medicago truncatula]
Length = 819
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 19/133 (14%)
Query: 136 VNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGK 195
VN + C G+ + +R+ + K+N +G+ A GG++R +G+
Sbjct: 540 VNILFSLQCEFGWTLLGAHITRVGF--------KVNCDGTMVEYGLKAAYGGVLRTSNGE 591
Query: 196 WILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLEL--PASFLD 253
+ +G+S+NLGT + +E+ A +NL G + L EA++ LEL P FL+
Sbjct: 592 FFVGFSRNLGTCSITIAEIRA----INLS-RSGNKGGLPAWEPSEALEWLELLNPIEFLE 646
Query: 254 PNRALILSCREYL 266
I+ REY+
Sbjct: 647 E----IVVEREYV 655
>gi|87162935|gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
Length = 409
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 7/173 (4%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASE 213
P I W+PP +K+N +GS + G I R + +++N+G + +L +E
Sbjct: 239 PCREIIWVPPHGGCMKINCDGSVVGSPSCGSIGVIFRASQTMFCGAFAQNIGYATALEAE 298
Query: 214 LWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCK 273
A + E + +E +S ++ +C + CR+
Sbjct: 299 YSACMFAIEKAKELHLTNIWIETDSVNVIRAFHFNTGVPWKMHIRWHNCLLF-CRSIRSL 357
Query: 274 LQLILREANSCANWLAAHCENQPLGSLAVFDTPPYA-LAPIFQKDSTGIVQTR 325
+ RE N A+ LA + + LA++ + P A ++ + +D G+ +R
Sbjct: 358 CTHVNREGNLVADALAKNGQ-----GLALYSSHPLAFISSFYVRDCLGLPFSR 405
>gi|222625610|gb|EEE59742.1| hypothetical protein OsJ_12207 [Oryza sativa Japonica Group]
Length = 469
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL-GTSNSLASELWALY 218
W PPP V +N + + ++ G G ++RD G+ +L ++ + + +E A+
Sbjct: 24 WTPPPVGTVMINCDAALFQSSCQMGIGFLIRDHDGRCLLALNERVQNVTQPELAEAVAIR 83
Query: 219 HGLNLVWERGFRKVLV 234
L+L E G++K V
Sbjct: 84 RALSLAKEEGYQKAPV 99
>gi|357465585|ref|XP_003603077.1| hypothetical protein MTR_3g102090 [Medicago truncatula]
gi|355492125|gb|AES73328.1| hypothetical protein MTR_3g102090 [Medicago truncatula]
Length = 142
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 144 CPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVR 190
C GF ++H + W PP WVKLN + S+SR G GG++R
Sbjct: 75 CVEGFTRLH-----VQWSPPEQGWVKLNTD-SASRVDARTGCGGLIR 115
>gi|168051001|ref|XP_001777945.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670705|gb|EDQ57269.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 2357
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 20/87 (22%)
Query: 9 YFLWGVFRDVKSNHIL-------------HESHRELPSLVSAMEYVCDGP-------AAM 48
FLWGVFR K L E+ + LP VS +CD + +
Sbjct: 1602 MFLWGVFRAKKQAAKLVSLPSFVAKEVPGTEALQSLPGSVSRAPAMCDTALKVKHSNSGV 1661
Query: 49 DNAEVTDMVVDMEGGKIVGPVDVVVSK 75
+N DM VDMEGGK G D V +
Sbjct: 1662 ENTGEIDMEVDMEGGKECGVSDKAVKR 1688
>gi|224059498|ref|XP_002299876.1| predicted protein [Populus trichocarpa]
gi|222847134|gb|EEE84681.1| predicted protein [Populus trichocarpa]
Length = 1221
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 158 ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWAL 217
+ W PP K N++GSS G +G GG++R+ G + +S +G +S +EL A+
Sbjct: 1075 VIWSPPTIGSFKWNVDGSSLGKPGLSGIGGVLRNHHGHLLGIFSLPVGILDSNIAELRAV 1134
Query: 218 YHGLNL 223
+ L
Sbjct: 1135 VKAVEL 1140
>gi|365222890|gb|AEW69797.1| Hop-interacting protein THI034 [Solanum lycopersicum]
Length = 288
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+S G AGAG ++R G + + +G + + +E + GL E+GF
Sbjct: 149 LEFDGASKGNPGLAGAGAVLRAADGSMVFRLREGVGVATNNVAEYRGVILGLRYALEKGF 208
Query: 230 RKVLVECNS 238
+ + V+ +S
Sbjct: 209 KHIKVKGDS 217
>gi|223949765|gb|ACN28966.1| unknown [Zea mays]
gi|413942425|gb|AFW75074.1| putative rnase H family protein [Zea mays]
Length = 331
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+ G +GAG I+R G I + LG + A+E AL GLN ++GF
Sbjct: 195 LEFDGACKGNPGKSGAGVIIRRLDGSVIAVLREGLGIMTNNAAEYRALILGLNYASKKGF 254
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSC---REYLCRNWDCKLQLILREANSCAN 286
+ + C + C ++ ++ + + + C +E ++ +LRE NS A+
Sbjct: 255 K--YIRCQGDSKLVCNQVQGAWRARSDNMSILCDIAKELKETFLTFQINHVLREFNSDAD 312
Query: 287 WLA 289
A
Sbjct: 313 VQA 315
>gi|357462757|ref|XP_003601660.1| hypothetical protein MTR_3g084070 [Medicago truncatula]
gi|355490708|gb|AES71911.1| hypothetical protein MTR_3g084070 [Medicago truncatula]
Length = 99
Score = 38.5 bits (88), Expect = 3.8, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 183 AGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
A G + +D+ G W+ G+ +NL L +LW +Y+ L L W++ +
Sbjct: 53 APCGEVFKDKPGVWLGGFGRNLRYYWVLMLKLWGIYYALELAWKKEY 99
>gi|116830567|gb|ABK28241.1| unknown [Arabidopsis thaliana]
Length = 143
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 188 IVRDESGKWIL-GYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCL- 245
I+R+ +G IL G +K +++SL +E+ H L ++W G R V E ++ + V L
Sbjct: 24 IIRESNGHTILCGSAKLHPSTSSLHAEVLGFLHALQVIWIHGLRYVWFETDNRDLVTLLN 83
Query: 246 -ELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLAAH 291
+ L P L+ R ++ + C + + RE NS A+ + H
Sbjct: 84 NDEDHRLLGP---LLCDIRYWMLKLPYCSIDFVNRERNSAADTSSLH 127
>gi|406882482|gb|EKD30269.1| ribonuclease H [uncultured bacterium (gcode 4)]
Length = 135
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Query: 168 VKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWER 227
+K+ +G + G AG G + DE+GK + K LG + + +E HG+ E
Sbjct: 3 LKIYTDGGARNNPGPAGIGVFITDENGKPLERRHKYLGIATNNQAEYQGALHGIRRGIEL 62
Query: 228 GFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQ--LILREANSCA 285
G ++ + +S V+ L +P +I + L W ++Q I RE N A
Sbjct: 63 GATEIELRMDSKLVVEQLSGNFKIKNPELKIIFREIQDLLEAWCGRIQHIHIRREHNGEA 122
Query: 286 NWLA 289
+ L+
Sbjct: 123 DRLS 126
>gi|156365884|ref|XP_001626872.1| predicted protein [Nematostella vectensis]
gi|156213764|gb|EDO34772.1| predicted protein [Nematostella vectensis]
Length = 227
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 143 DCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSK 202
DC + I RP S IC V N E ++S QG +G G +V +E G+W+L +
Sbjct: 153 DCKRAYGAIIRPYSHIC--------VGFNTENAASSCQGDSG-GPLVCEEEGRWVLHGAT 203
Query: 203 NLGTSNS 209
+ G S S
Sbjct: 204 SFGKSCS 210
>gi|429731084|ref|ZP_19265725.1| ribonuclease HI [Corynebacterium durum F0235]
gi|429146467|gb|EKX89520.1| ribonuclease HI [Corynebacterium durum F0235]
Length = 371
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 168 VKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWER 227
V++ +G S G AG+G ++ D SG + + +GT+ + +E AL +GL +
Sbjct: 3 VQIKADGGSRGNPGIAGSGTVLYDASGTVLTSIADYVGTATNNVAEYRALLNGLEAARDL 62
Query: 228 GFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC-KLQLILREANSCAN 286
G +V V +S V+ + P+ + + + R++D I R NS A+
Sbjct: 63 GATEVEVLMDSKLVVEQMSGRWKIKHPDMKELALKAQAIARDFDVISYTWIPRAENSEAD 122
Query: 287 WLA-----AHCENQPLGSLA 301
LA A P+G +A
Sbjct: 123 ALANQAMDAGAAGAPIGIVA 142
>gi|218193018|gb|EEC75445.1| hypothetical protein OsI_11981 [Oryza sativa Indica Group]
Length = 205
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGK 195
P + W PP W+KLNI+GS + G G I+ D +GK
Sbjct: 61 PKPLLRWERPPVGWMKLNIDGSFDSSAEKGGVGAILWDSAGK 102
>gi|77556435|gb|ABA99231.1| hypothetical protein LOC_Os12g34030 [Oryza sativa Japonica Group]
Length = 346
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 128 RPLSKGKLVNSMIDADCPPGFEKIHRPNSRIC-WMPPPTNWVKLNIEGSSSRAQGSAGAG 186
+PL +LV+ +I + P E P++ + W P W+KLN +G+ + G AGAG
Sbjct: 250 QPLRSVELVDELIKSLEIPAQED---PSAVVQKWARPALGWMKLNTDGALNLQDGVAGAG 306
Query: 187 GIVRDESGKWI 197
+ RD +G ++
Sbjct: 307 IVARDNTGNFV 317
>gi|242049322|ref|XP_002462405.1| hypothetical protein SORBIDRAFT_02g025125 [Sorghum bicolor]
gi|241925782|gb|EER98926.1| hypothetical protein SORBIDRAFT_02g025125 [Sorghum bicolor]
Length = 457
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTS-NSLASELWALY 218
W+ P W+K N +G+ Q G ++RDE+G ++ ++ ++L +E A
Sbjct: 333 WVKPEAGWMKCNTDGAFYDRQWKGATGAVLRDENGLFVRACARWYDHCLDALTAEALACR 392
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLIL 278
GL + +V +E +S E ++ + + ++ RE D K +I
Sbjct: 393 DGLKMAQHINADRVWLETDSQELLRLWQAGQNQRTSVEGVLAEIRELSRAFIDFKFTVIA 452
Query: 279 REAN 282
R N
Sbjct: 453 RSCN 456
>gi|358343964|ref|XP_003636065.1| Beta-amyrin synthase, partial [Medicago truncatula]
gi|355502000|gb|AES83203.1| Beta-amyrin synthase, partial [Medicago truncatula]
Length = 367
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 19/133 (14%)
Query: 136 VNSMIDADCPPGFEKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGK 195
VN + C G+ + +R+ + K+N +G+ A GG++R +G+
Sbjct: 88 VNILFSLQCEFGWTLLGAHITRVGF--------KVNCDGTMVEYGLKAAYGGVLRTSNGE 139
Query: 196 WILGYSKNLGTSNSLASELWALYHGLNLVWERGFRKVLVECNSHEAVKCLEL--PASFLD 253
+ +G+S+NLGT + +E+ A +NL G + L EA++ LEL P FL+
Sbjct: 140 FFVGFSRNLGTCSITIAEIRA----INLS-RSGNKGGLPAWEPSEALEWLELLNPIEFLE 194
Query: 254 PNRALILSCREYL 266
I+ REY+
Sbjct: 195 E----IVVEREYV 203
>gi|124361204|gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 260
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYS--KNLGTSNSLASELWAL 217
W PP VK N+E + G G RD G ++ G S + L + S A E L
Sbjct: 102 WEKPPLTVVKCNVECALFNNNSIMGYGLCFRDSMGHFLPGMSNYEFLRVTPSEA-EATGL 160
Query: 218 YHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRAL---ILSCREYLCRNWDCKL 274
+ L RG + V+ + + V + S ++P+ L I C++ L + + +
Sbjct: 161 LEAVKLAIARGMQSVIFKSDCKIVVDAVN---SSVNPHNELGDIIFYCKQLLSLHANFSV 217
Query: 275 QLILREANSCANWLAAHCENQPLGSLAVFDTP 306
+ + R+AN A+ +A + P + FD P
Sbjct: 218 RFVRRQANKVAHNIARASLSHPSPHI-FFDVP 248
>gi|255584688|ref|XP_002533065.1| conserved hypothetical protein [Ricinus communis]
gi|223527129|gb|EEF29304.1| conserved hypothetical protein [Ricinus communis]
Length = 339
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 159 CWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILG 199
W P W K+N++ S S +GAG ++RD +G W+ G
Sbjct: 275 VWHKPVEGWYKMNVDASFSEHSRMSGAGFVLRDSAGAWVSG 315
>gi|134098170|ref|YP_001103831.1| bifunctional ribonuclease H/phosphoglycerate mutase
[Saccharopolyspora erythraea NRRL 2338]
gi|291007551|ref|ZP_06565524.1| putative bifunctional protein (ribonuclease H/phosphoglycerate
mutase) [Saccharopolyspora erythraea NRRL 2338]
gi|133910793|emb|CAM00906.1| putative bifunctional protein (ribonuclease H/phosphoglycerate
mutase) [Saccharopolyspora erythraea NRRL 2338]
Length = 366
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 168 VKLNIEGSSSRAQGSAGAGGIVRD-ESGKWILGYSKNLGTSNSLASELWALYHGLNLVWE 226
V + +G S G AG G +VRD SG+ + S LGT+ + A+E L GL+ E
Sbjct: 5 VVIEADGGSRGNPGPAGCGAVVRDATSGEVLAERSVGLGTATNNAAEYRGLIEGLSAAVE 64
Query: 227 RGFRKVLVECNSHEAVKCL----ELPASFLDPNRALILSCREYLCRNWDCKLQLILREAN 282
G + V +S ++ + ++ + L P L R L + L+ + R N
Sbjct: 65 LGAEAIEVRMDSKLVIEQMAGRWKVKHANLQP---LAEKARALLAGFGEVDLEWVPRARN 121
Query: 283 SCANWLAAHCENQPLG 298
+ A+ LA ++ G
Sbjct: 122 AHADRLANEAMDEQAG 137
>gi|297834010|ref|XP_002884887.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330727|gb|EFH61146.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 142
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 183 AGAGGIVRDESGKWILGYSKNLG--TSNSLASELWALYHGLNLVWERGFRKVLVECNSHE 240
A AG ++RD+ G +I G + +G T++ L SEL AL + W +G++K+L E ++ E
Sbjct: 3 AKAGWVIRDDRGTFI-GAGQAIGKPTNSCLESELQALIMAMQNCWGKGYKKILFEGDNKE 61
Query: 241 AVKCLE-LPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLA 289
+ L A+F N I + R +C+ R+ N A+ LA
Sbjct: 62 IEEILNGNKANFGAYN--WIREVSAWRKRFEECRFVWTRRDCNMVADTLA 109
>gi|357467887|ref|XP_003604228.1| hypothetical protein MTR_4g006820 [Medicago truncatula]
gi|355505283|gb|AES86425.1| hypothetical protein MTR_4g006820 [Medicago truncatula]
Length = 57
Score = 38.5 bits (88), Expect = 4.7, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGT 206
W P W+K NI+ + + + A GG+ D G W G+ NLG+
Sbjct: 5 WKTPDGAWIKCNIDRAFNTSNHRAACGGVFLDSIGVWFGGFGPNLGS 51
>gi|224111824|ref|XP_002315990.1| predicted protein [Populus trichocarpa]
gi|222865030|gb|EEF02161.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 38.5 bits (88), Expect = 4.8, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 237 NSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKLQLILREANSCANWLA 289
+S E + C+ P+ P+ ALI+ R + +W +L+ +LRE N C +LA
Sbjct: 2 DSMEVIGCVLDPSDASHPHLALIIDIRALIQADWQFRLKHVLREGNRCDYFLA 54
>gi|222631197|gb|EEE63329.1| hypothetical protein OsJ_18140 [Oryza sativa Japonica Group]
Length = 405
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 15/139 (10%)
Query: 158 ICWMPPPTNWVKLNIEGSS-SRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWA 216
+ W PP W KLN +GS + A GG++RD +L +++ E A
Sbjct: 232 VRWARPPPGWCKLNFDGSVFNDGSPRASIGGVIRDSDAGVVLAFAETTEHWTVGVVEARA 291
Query: 217 LYHGLNLVWERGFRKVLVECNSHEAVKCL-------ELPASFLDPNRALILSCREYLCRN 269
+ GL +++VE + V+ + +PA+ + L+ E R+
Sbjct: 292 MIRGLRFALACFIERLVVEGDDLVLVQLIRGEETQTRIPAAMQEEILNLLRCFAEVDVRH 351
Query: 270 WDCKLQLILREANSCANWL 288
I RE NS A+ L
Sbjct: 352 -------IYREGNSVAHTL 363
>gi|257052283|ref|YP_003130116.1| ribonuclease H [Halorhabdus utahensis DSM 12940]
gi|256691046|gb|ACV11383.1| ribonuclease H [Halorhabdus utahensis DSM 12940]
Length = 198
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 172 IEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRK 231
++G+S G A G ++ G + K +G++ + +E AL H L + + GF
Sbjct: 73 VDGASRGNPGPAAIGWVILTGDGGIVTEGGKRIGSTTNNRAEYEALIHALEIAADYGFDS 132
Query: 232 VLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNW-DCKLQLILREANSCANWLA 289
V V +S AV+ + DP+ L R + D ++ + RE N A+ LA
Sbjct: 133 VEVRSDSELAVRQVRGEWDTNDPDLRERRVRVRELFREFDDWSIEHVPREINERADALA 191
>gi|2129709|pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
thaliana retrotransposon Ta11-1
gi|976278|gb|AAA75254.1| reverse transcriptase [Arabidopsis thaliana]
Length = 1333
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWIL 198
W PPP WVK NI G S + G ++RD+ GK +L
Sbjct: 1213 WEPPPLGWVKCNISGVWSGKKRVCGGAWVLRDDHGKVLL 1251
>gi|332322136|emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 11/172 (6%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSL-AS 212
P++R+ W PP +KLN++ S + A G G I RD G + + + S +
Sbjct: 1190 PSARV-WAAPPPEVIKLNVDASLASA-GWVGLSVIARDSHGTVLFAAVRKVRAQWSAEIA 1247
Query: 213 ELWALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDC 272
E A+ L L GF ++VE + V L A +L + +IL C N+
Sbjct: 1248 EAKAIEMALRLGRRYGFAAIIVESDCQVVVNRLSKQALYL-ADLDIILHNIFSSCINFPS 1306
Query: 273 KL-QLILREANSCANWLAAHCENQPLGSLAVFD--TPPYALAPIFQKDSTGI 321
L + R+ANS A+ LA + P G +++ PP +AP D+ +
Sbjct: 1307 VLWSHVKRDANSVAHHLA---KLTPFGIEQIWENHVPP-EVAPYVLMDNLSL 1354
>gi|125587145|gb|EAZ27809.1| hypothetical protein OsJ_11756 [Oryza sativa Japonica Group]
Length = 452
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSS 177
P+SR W PPP WVKLN++G+ S
Sbjct: 428 PDSRTVWKPPPPGWVKLNVDGAFS 451
>gi|28201549|gb|AAO34487.1| putative reverse transcriptase [Oryza sativa Japonica Group]
gi|108709868|gb|ABF97663.1| retrotransposon protein, putative, LINE subclass [Oryza sativa
Japonica Group]
Length = 435
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 154 PNSRICWMPPPTNWVKLNIEGSSS 177
P+SR W PPP WVKLN++G+ S
Sbjct: 411 PDSRTVWKPPPPGWVKLNVDGAFS 434
>gi|357146482|ref|XP_003574008.1| PREDICTED: uncharacterized protein LOC100824410 isoform 2
[Brachypodium distachyon]
Length = 298
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
++ +G+S G +GAG ++ E G+ I + LG + + +E L GL + GF
Sbjct: 159 IHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIKHGF 218
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSCRE 264
+++ V +S + C ++ ++ ++ C+E
Sbjct: 219 KRIKVYGDSQ--LVCYQVKGTWQAKKENMMELCKE 251
>gi|357493989|ref|XP_003617283.1| hypothetical protein MTR_5g089930 [Medicago truncatula]
gi|355518618|gb|AET00242.1| hypothetical protein MTR_5g089930 [Medicago truncatula]
Length = 91
Score = 38.1 bits (87), Expect = 5.9, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 168 VKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSN 208
+KLN++GSS G +G G ++R+ S WI +S+ G TSN
Sbjct: 2 IKLNVDGSSISNSGRSGYGSLLRNSSRDWIFDFSERCGFTSN 43
>gi|77553407|gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1378
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Query: 157 RICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNL--GTSNSLASEL 214
R W PP V +N++ G G ++RD SG +L + + ++ +E
Sbjct: 664 RQGWKKPPEGKVMVNVDAGFDEMGGCGTVGSVIRDCSGG-VLAAAHSFVPHLVDAPMAEA 722
Query: 215 WALYHGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNWDCKL 274
+AL GL L + G +++++ + E V+ + + A+ C D +
Sbjct: 723 FALKEGLMLAQQIGCNRLIIQSDCMEVVQIMTDGGFTANSAAAIYEDCNILWSGFADITI 782
Query: 275 QLILREANSCAN 286
+ REAN C +
Sbjct: 783 EHCSREANQCTD 794
>gi|194699332|gb|ACF83750.1| unknown [Zea mays]
Length = 292
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L+ +G+S G AGAG ++ E G+ I + LG + + +E L GL GF
Sbjct: 154 LHFDGASKGNPGKAGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRHGF 213
Query: 230 RKVLVECNSH 239
+++ V +S
Sbjct: 214 KRIKVHGDSQ 223
>gi|242040303|ref|XP_002467546.1| hypothetical protein SORBIDRAFT_01g030030 [Sorghum bicolor]
gi|241921400|gb|EER94544.1| hypothetical protein SORBIDRAFT_01g030030 [Sorghum bicolor]
Length = 299
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWI-LGYSKNLGTSNSLASELWALY 218
W PPP + +K+N +G+ S G G ++R+ G I GY + + ++ +EL A
Sbjct: 155 WAPPPESCMKINCDGAFFSNTRSEGWGFLIREWDGGVISSGYGRLENVNEAVHTELVACL 214
Query: 219 HGLNLVWERGFRKVLVECNSHEAVK 243
L + G ++++ E +++ V+
Sbjct: 215 QALQRAADLGIQRIIFETDAYMIVQ 239
>gi|357473471|ref|XP_003607020.1| hypothetical protein MTR_4g071270 [Medicago truncatula]
gi|355508075|gb|AES89217.1| hypothetical protein MTR_4g071270 [Medicago truncatula]
Length = 215
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLAS-ELWALY 218
W P T W+K N + + A+G G RD G I S + + A E AL
Sbjct: 106 WSKPQTYWIKCNADCALFEAEGKFGVDICFRDSLGHLIQANSMIFPSFTTAAECEATALQ 165
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALILSCREYL 266
+ G +V+ E + V + S+++ +L+ +CR L
Sbjct: 166 QAFQIALVLGLNRVVFESDCQLVVNAILNNRSYMNELGSLLSNCRTLL 213
>gi|212275993|ref|NP_001130760.1| uncharacterized protein LOC100191864 [Zea mays]
gi|194690044|gb|ACF79106.1| unknown [Zea mays]
Length = 292
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L+ +G+S G AGAG ++ E G+ I + LG + + +E L GL GF
Sbjct: 154 LHFDGASKGNPGKAGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRHGF 213
Query: 230 RKVLVECNSH 239
+++ V +S
Sbjct: 214 KRIKVHGDSQ 223
>gi|357146480|ref|XP_003574007.1| PREDICTED: uncharacterized protein LOC100824410 isoform 1
[Brachypodium distachyon]
Length = 319
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
++ +G+S G +GAG ++ E G+ I + LG + + +E L GL + GF
Sbjct: 180 IHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIKHGF 239
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSCRE 264
+++ V +S + C ++ ++ ++ C+E
Sbjct: 240 KRIKVYGDSQ--LVCYQVKGTWQAKKENMMELCKE 272
>gi|224144586|ref|XP_002336163.1| predicted protein [Populus trichocarpa]
gi|222874752|gb|EEF11883.1| predicted protein [Populus trichocarpa]
Length = 66
Score = 37.7 bits (86), Expect = 6.9, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 191 DESGKWILGYSKNLGTSNSLASEL--WALYHGLNLVWERGFRK 231
D G W+ GY+ +G + +L +EL WA+ GL + RGF++
Sbjct: 10 DRGGVWLRGYAARIGVATNLTAELWAWAVRTGLRIALARGFKR 52
>gi|242089145|ref|XP_002440405.1| hypothetical protein SORBIDRAFT_09g000480 [Sorghum bicolor]
gi|241945690|gb|EES18835.1| hypothetical protein SORBIDRAFT_09g000480 [Sorghum bicolor]
Length = 341
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L +G+ G +GAG I+R G I + LG + A+E AL GLN ++GF
Sbjct: 204 LEFDGACKGNPGKSGAGVIIRRLDGSVIALLREGLGIMTNNAAEYRALILGLNYASKKGF 263
Query: 230 RKVLVECNSHEAVKC 244
+ + C + C
Sbjct: 264 K--YIRCQGDSKLVC 276
>gi|332322171|emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1381
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 156 SRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELW 215
S + W PPP+ +K N++ S + GG++R+ SG ++ +S + +E+
Sbjct: 1231 SSVSWCPPPSQIIKWNVDASVHTCSARSAIGGVLRNHSGNFMCLFSSPIPFMEINCAEIL 1290
Query: 216 ALYHGLNLV---WERGFRKVLVECNSHEAV 242
A++ + + E K+++E +S AV
Sbjct: 1291 AIHRAVKISSAKEELKGAKIILESDSKNAV 1320
>gi|357453447|ref|XP_003597000.1| hypothetical protein MTR_2g088480 [Medicago truncatula]
gi|355486048|gb|AES67251.1| hypothetical protein MTR_2g088480 [Medicago truncatula]
Length = 97
Score = 37.7 bits (86), Expect = 7.5, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 173 EGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASEL 214
+G+ + AG G + RD G+WI GY+K +G ++L E+
Sbjct: 34 DGACKDTRVIAGCGDLFRDSDGRWIKGYTKKIGACDALYVEI 75
>gi|108711965|gb|ABF99760.1| hypothetical protein LOC_Os03g62000 [Oryza sativa Japonica Group]
Length = 322
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLG-TSNSLASELWALY 218
W PP W+KLN +GS G+ G G ++R+ G+ I L TS+ L +EL A
Sbjct: 261 WRPPEQGWMKLNTDGSFQAEAGNGGIGVVLRNCHGEIIFSACGFLQRTSSVLEAELLACR 320
Query: 219 HG 220
G
Sbjct: 321 EG 322
>gi|357146485|ref|XP_003574009.1| PREDICTED: uncharacterized protein LOC100824410 isoform 3
[Brachypodium distachyon]
Length = 280
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
++ +G+S G +GAG ++ E G+ I + LG + + +E L GL + GF
Sbjct: 141 IHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIKHGF 200
Query: 230 RKVLVECNSHEAVKCLELPASFLDPNRALILSCRE 264
+++ V +S + C ++ ++ ++ C+E
Sbjct: 201 KRIKVYGDSQ--LVCYQVKGTWQAKKENMMELCKE 233
>gi|255566704|ref|XP_002524336.1| conserved hypothetical protein [Ricinus communis]
gi|223536427|gb|EEF38076.1| conserved hypothetical protein [Ricinus communis]
Length = 114
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 149 EKIHRPNSRICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDES---GKWILG 199
K+ R + I W P +WV L+ +GS R A AGG+VR S WI G
Sbjct: 57 HKVGRVDGLIGWSCPAQDWVTLSTDGSVKRVNSFAAAGGLVRQPSWGLDGWIYG 110
>gi|255566905|ref|XP_002524435.1| conserved hypothetical protein [Ricinus communis]
gi|223536223|gb|EEF37875.1| conserved hypothetical protein [Ricinus communis]
Length = 71
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 135 LVNSMIDADCP-PGFEKIHRPNSR--ICWMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRD 191
++NS I + P PG K H S I W PP +W+K+N G AG GGI+RD
Sbjct: 6 VLNSHIAFNSPIPGIIK-HASKSLKLIGWDPPHEDWIKMN--------TGDAGGGGILRD 56
Query: 192 ESGKWILGY 200
++G W G+
Sbjct: 57 KNGCWKGGF 65
>gi|332322141|emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTS-NSLASELWALY 218
W PP +KLN + S + +G G G I RD GK ++ + +E A+Y
Sbjct: 1198 WYAPPVGAIKLNTDASLAE-EGWVGLGVIARDSEGKVCFAATRRVRAYWPPEVAECKAIY 1256
Query: 219 HGLNLVWERGFRKVLVECNSHEAVKCLELPASFLDPNRALI 259
L G+ V+ E +S A K L A F A++
Sbjct: 1257 MATRLAQAHGYGDVIFESDSLVATKRLTKAAIFFSDLDAIL 1297
>gi|255555671|ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
gi|223541858|gb|EEF43404.1| conserved hypothetical protein [Ricinus communis]
Length = 668
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYS-KNLGTSNSLASELWALY 218
W P W+K+N + + QG G G +VRD +G+ I+ S + +G + +E ++
Sbjct: 588 WTKPELGWLKINTDTALFLKQGRIGLGCVVRDSNGRMIMARSERRVGRFTAREAEALSMK 647
Query: 219 HGLNLVWERGFRKVLVECNSH 239
L+ + + K E ++
Sbjct: 648 EALSYMKDYQMDKCFFELDAQ 668
>gi|357446315|ref|XP_003593435.1| hypothetical protein MTR_2g011960 [Medicago truncatula]
gi|355482483|gb|AES63686.1| hypothetical protein MTR_2g011960 [Medicago truncatula]
Length = 129
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%)
Query: 161 MPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHG 220
+ PP + VKL ++G S + G GG++R+ +G+W + GT+ + ++L A+ G
Sbjct: 44 LEPPKSVVKLKVDGRSLCNPSNLGFGGLIRNSNGEWHGEFRVCCGTTTNGNAKLSAIAFG 103
Query: 221 LNLVW 225
L V+
Sbjct: 104 LQYVY 108
>gi|224144677|ref|XP_002325372.1| predicted protein [Populus trichocarpa]
gi|222862247|gb|EEE99753.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 160 WMPPPTNWVKLNIEGSSSRAQGSAGAGGIVRDESG 194
W PP +K N++GSS G AG GG++RD +G
Sbjct: 185 WNPPDLYTLKWNVDGSSKGKLGPAGIGGVLRDHNG 219
>gi|414871215|tpg|DAA49772.1| TPA: putative rnase H family protein [Zea mays]
Length = 143
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 170 LNIEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGF 229
L+ +G+S G AGAG ++ E G+ I + LG + + +E L GL GF
Sbjct: 5 LHFDGASKGNPGKAGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRHGF 64
Query: 230 RKVLVECNSH 239
+++ V +S
Sbjct: 65 KRIKVHGDSQ 74
>gi|269791797|ref|YP_003316701.1| ribonuclease H [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269099432|gb|ACZ18419.1| ribonuclease H [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 132
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 12/127 (9%)
Query: 172 IEGSSSRAQGSAGAGGIVRDESGKWILGYSKNLGTSNSLASELWALYHGLNLVWERGFRK 231
+G+S G AGAG ++ DE G+ + + + LG + +E WAL L RG +
Sbjct: 6 FDGASRGNPGPAGAGALLEDEDGRVVWEHREYLGRRTNNEAEYWALIALLEEARSRGIDR 65
Query: 232 VLVECNSHEAVKCLELPASFLDPNRALILSCREYLCRNW------DCKLQLILREANSCA 285
++ +S V + P+ RE R W D + I RE N A
Sbjct: 66 LIAMGDSQLVVSQVTRKWKINMPH------LRELARRVWELSEGMDVSFRWIPREENRRA 119
Query: 286 NWLAAHC 292
+ L+
Sbjct: 120 DRLSNQA 126
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,508,238,603
Number of Sequences: 23463169
Number of extensions: 229723063
Number of successful extensions: 484387
Number of sequences better than 100.0: 623
Number of HSP's better than 100.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 276
Number of HSP's that attempted gapping in prelim test: 483825
Number of HSP's gapped (non-prelim): 662
length of query: 327
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 185
effective length of database: 9,027,425,369
effective search space: 1670073693265
effective search space used: 1670073693265
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)