Your job contains 1 sequence.
>039497
MEPKGTIVFTTVGRPYYGFDVFSIKSPFVNAPKFHEHRLTDGTSINFNAQFVDGQDQTIA
FISERSGSPRIYQTRPGSSKTELLPSIPCSLFHDRPVARNNKLFFISAHEQPDQIFKSWS
ALYSTDLKASKFTRLTPYGVVDYSPSVSYSGKFIAVASYESRPWPGEFHELNTDIVVFQE
SDPNKRVIVCERGGWPTWSGDSTIYFHRQADDGWWSIFRVSFPENLEFLGFPIAPTRVTP
PGVHCFTPAAFHDGKRLAVATRRKNRNFRHIEIYDLTLNPNFHHYNPFVSANSEFIGYHR
FRGESTEGQSTIPHLEPVASPVKELRMLRLNGSFPSFSPDGGLIVFNHDFELNAGIKIAK
SDGSKRWTLIKDRTAFYNSWSPTEKHVIYTSTGPIFQSERATVQIARVSFQLDPSDDNNR
EEIPCDVKILTKEETGNNAFPSCSPDGKFLVFRSGRSGHKNLFVLDAVNGEFNGDIRQLT
DGPWIDTMPSWSPKGDLIAFSSNRHNPDNVEAFSLYVIKPDGSGLRRIHVAGPEGSGDVD
RERINHVCFSADGEWLLFTANLGAVMAEPVSWPNQFQPYGDLYVVKLDGSGLRRLTWNGY
ENGTPAWHPGNQLDLGKLRLEDDIGDKLRGQFDEPLWISCDF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039497
(642 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2141405 - symbol:AT4G01870 "AT4G01870" species... 2428 3.8e-252 1
TAIR|locus:2036916 - symbol:AT1G21680 "AT1G21680" species... 1136 3.1e-115 1
TAIR|locus:2036982 - symbol:AT1G21670 species:3702 "Arabi... 962 2.7e-109 2
ASPGD|ASPL0000037579 - symbol:AN2818 species:162425 "Emer... 153 2.3e-10 2
TIGR_CMR|CBU_0090 - symbol:CBU_0090 "tolB protein" specie... 149 3.7e-07 1
TIGR_CMR|SPO_3109 - symbol:SPO_3109 "tolB protein, putati... 131 5.4e-07 2
UNIPROTKB|Q74H67 - symbol:tolB "Protein TolB" species:243... 141 2.7e-06 1
TIGR_CMR|GSU_0025 - symbol:GSU_0025 "tolB protein" specie... 141 2.7e-06 1
UNIPROTKB|P0A855 - symbol:tolB species:83333 "Escherichia... 137 7.5e-06 1
TIGR_CMR|CPS_1731 - symbol:CPS_1731 "tolB protein" specie... 128 7.8e-05 1
TIGR_CMR|SO_2748 - symbol:SO_2748 "tolB protein" species:... 122 0.00034 1
>TAIR|locus:2141405 [details] [associations]
symbol:AT4G01870 "AT4G01870" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=RCA] [GO:0010583
"response to cyclopentenone" evidence=RCA] [GO:0019243
"methylglyoxal catabolic process to D-lactate" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
InterPro:IPR002469 InterPro:IPR015943 Pfam:PF00930 EMBL:CP002687
GO:GO:0016020 Gene3D:2.130.10.10 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0006508 EMBL:AC007138 EMBL:AL161493
InterPro:IPR011659 Pfam:PF07676 EMBL:BT006171 EMBL:AK227106
IPI:IPI00529115 PIR:A85024 RefSeq:NP_192096.1 UniGene:At.19803
ProteinModelPortal:Q9SYI5 SMR:Q9SYI5 STRING:Q9SYI5 PRIDE:Q9SYI5
EnsemblPlants:AT4G01870.1 GeneID:828228 KEGG:ath:AT4G01870
TAIR:At4g01870 InParanoid:Q9SYI5 OMA:GYHRFRG PhylomeDB:Q9SYI5
ProtClustDB:CLSN2685543 Genevestigator:Q9SYI5 Uniprot:Q9SYI5
Length = 652
Score = 2428 (859.8 bits), Expect = 3.8e-252, P = 3.8e-252
Identities = 443/658 (67%), Positives = 527/658 (80%)
Query: 1 ME-PKGTIVFTTVGRPYYGFDVFSIKSPFVNAPKFHEHRLTDGTSINFNAQFVDGQDQTI 59
ME PKGTI+FTTVGR +YGFDVFS+ N E RLTDG S+NFNAQFV+ + +
Sbjct: 1 METPKGTIIFTTVGRTHYGFDVFSL-----NIATSVERRLTDGVSVNFNAQFVNDKSDDV 55
Query: 60 AFISERSGSPRIYQTRPGSSKTELLPSIPCSLFHDRPV-ARNNKLFFISAHEQPDQIFKS 118
F+SER+GS RIY+TR G SK E +P P S FHDRP+ +NN+L+FISAHEQPD+ FK+
Sbjct: 56 VFVSERNGSARIYKTRSGISKPEQIPGAPESYFHDRPIITQNNRLYFISAHEQPDRYFKN 115
Query: 119 WSALYSTDLKASK--FTRLTPYGVVDYSPSVSYSGKFIAVASYESRPWPGEFHELNTDIV 176
WSALY+ +L ++K TR+TP D+SP+VS SG F+AVASY +R W GEFHE+NTDI
Sbjct: 116 WSALYTVELNSAKREVTRVTPPDTADFSPAVSQSGDFLAVASYGTRSWGGEFHEINTDIT 175
Query: 177 VFQESDPNKRVIVCERGGWPTWSGDSTIYFHRQADDGWWSIFRVSFPENL-EFLGFPIAP 235
VF+ S P RV++CERGGWPTWSGDST++FH QADDGWWSIFRV PEN E+ FPI P
Sbjct: 176 VFKASKPETRVVICERGGWPTWSGDSTVFFHHQADDGWWSIFRVDIPENFTEYTDFPITP 235
Query: 236 TRVTPPGVHCFTPAAFHDGKRLAVATRRKNRNFRHIEIYDL----------TLNPNFHHY 285
RVTP G+HCFTPAAF DGKR+A+ATRR+ N RHIEIYDL +LNP+FHHY
Sbjct: 236 IRVTPSGLHCFTPAAFRDGKRIALATRRRGVNHRHIEIYDLENTTFQPVTESLNPSFHHY 295
Query: 286 NPFVSANSEFIGYHRFRGESTEGQSTIPHLEPVASPVKELRMLRLNGSFPSFSPDGGLIV 345
NPFVS +SEF+GYHRFRGEST+G+S +P++E + SP+K LR+LR+NGSFPS SP+G LI
Sbjct: 296 NPFVSPDSEFLGYHRFRGESTQGESIVPNIESIVSPIKTLRLLRINGSFPSSSPNGDLIA 355
Query: 346 FNHDFELNAGIKIAKSDGSKRWTLIKDRTAFYNSWSPTEKHVIYTSTGPIFQSERATVQI 405
N DF++N GIK++KSDGSKRWTLIKDRTAFYNSWSPTE+HVIYTS GPIF R VQI
Sbjct: 356 LNSDFDINGGIKVSKSDGSKRWTLIKDRTAFYNSWSPTERHVIYTSLGPIFSPARIAVQI 415
Query: 406 ARVSFQLDPSD-DNNREEIPCDVKILTKEETGNNAFPSCSPDGKFLVFRSGRSGHKNLFV 464
AR+ F DPSD ++E++PCDVKILT E TGNNAFPSCSPDGK +VFRSGRSGHKNL++
Sbjct: 416 ARIKF--DPSDLTADKEDLPCDVKILTLENTGNNAFPSCSPDGKSIVFRSGRSGHKNLYI 473
Query: 465 LDAVNGEFNGD-IRQLTDGPWIDTMPSWSPKGDLIAFSSNRHNPDNVEAFSLYVIKPDGS 523
+DAVNGE NG IR+LTDGPWIDTMP WSPKGDLI FSSNRHNP+N F YV++PDG+
Sbjct: 474 VDAVNGESNGGGIRRLTDGPWIDTMPCWSPKGDLIGFSSNRHNPENTAVFGAYVVRPDGT 533
Query: 524 GLRRIHVAGPEGSGDVDRERINHVCFSADGEWLLFTANLGAVMAEPVSWPNQFQPYGDLY 583
GLRRI ++GPEGS + RER+NHV F+ DG+WL+F ANL V AEPV+ PNQFQPYGDLY
Sbjct: 534 GLRRIQISGPEGSEEAARERVNHVSFNKDGDWLVFAANLSGVTAEPVTMPNQFQPYGDLY 593
Query: 584 VVKLDGSGLRRLTWNGYENGTPAWHPGNQLDLGKLRLEDDIGDKLRGQFDEPLWISCD 641
VVKLDG+GLRRLTWNGYE+GTP WH ++LDL +L L GDKL GQF+EPLWISCD
Sbjct: 594 VVKLDGTGLRRLTWNGYEDGTPTWHTADELDLSQLNLNGQDGDKLEGQFEEPLWISCD 651
>TAIR|locus:2036916 [details] [associations]
symbol:AT1G21680 "AT1G21680" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0009505 "plant-type cell wall" evidence=IDA] [GO:0019243
"methylglyoxal catabolic process to D-lactate" evidence=RCA]
InterPro:IPR015943 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005774 Gene3D:2.130.10.10 GO:GO:0009505 EMBL:AC007727
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823
ProtClustDB:CLSN2685543 EMBL:AY046036 EMBL:AY142688 IPI:IPI00537881
PIR:A86350 RefSeq:NP_564147.1 UniGene:At.20376
ProteinModelPortal:Q9XI10 SMR:Q9XI10 STRING:Q9XI10 PaxDb:Q9XI10
PRIDE:Q9XI10 EnsemblPlants:AT1G21680.1 GeneID:838770
KEGG:ath:AT1G21680 TAIR:At1g21680 HOGENOM:HOG000240011
InParanoid:Q9XI10 OMA:EWIAFAS PhylomeDB:Q9XI10 ArrayExpress:Q9XI10
Genevestigator:Q9XI10 Uniprot:Q9XI10
Length = 706
Score = 1136 (405.0 bits), Expect = 3.1e-115, P = 3.1e-115
Identities = 237/546 (43%), Positives = 336/546 (61%)
Query: 76 PGSSKTELLPSIPCSLFHDRPVARNNKLFFISAHEQPDQIFKSWSALYSTDLKASKFTRL 135
P S+ + L + + F D+P + ++S HE + SW+A+YST+LK RL
Sbjct: 145 PLLSRFDHLSGMTVNSFKDKPSLSGEFIVYVSTHESSGEPRASWTAVYSTELKTGLTRRL 204
Query: 136 TPYGVVDYSPSVSYSGKFIAVASYESRPWPGEFHELNTDIVVFQESDPNKRVIVCERGGW 195
TP GV D+SP+VS SG AVASY R W GE EL TDI VF D + RV V E GGW
Sbjct: 205 TPSGVADFSPAVSPSGNLTAVASYGERGWTGEVEELRTDIYVFLTRDGSHRVKVVEHGGW 264
Query: 196 PTWSGDSTIYFHRQAD-DGWWSIFRVSFPENLEFLGFPIAPTRVTPPGVHCFTPAAFHDG 254
P W +ST+YFHR+++ DGW S++R PEN + RVTPPGVH FTPA +
Sbjct: 265 PCWVDESTLYFHRRSEEDGWISVYRAILPENGPLTTESVTIQRVTPPGVHAFTPATSPNN 324
Query: 255 KR-LAVATRRKNRNFRHIEIYDLTLN----------PNFHHYNPFVSANSEFIGYHRFRG 303
+AVATRR ++RH+E++DL N P HH NPF+S +S +GYH RG
Sbjct: 325 HEFVAVATRRPGSDYRHVELFDLKRNEFIELTRLVAPKSHHLNPFLSPDSSRVGYHSCRG 384
Query: 304 ESTEGQSTIPHLEPVASPVKELRMLRLNGSFPSFSPDGGLIVFNHDFELNAGIKIAKSDG 363
++ +S + LE + + ++L + R++GSFPSFSP G I + ++ G+ + K DG
Sbjct: 385 DANGRRSPLLFLENIQTTTRDLSLFRIDGSFPSFSPGGDRIAY---VKM-PGVFVVKPDG 440
Query: 364 SKRWTLIKDRTAFYNSWSPTEKHVIYTSTGPIFQSERATVQIARVSFQLDPSDDNNREEI 423
S + + K AF +W P ++Y+S+GP F +ER V + +S +D +D ++
Sbjct: 441 SGQREVYKGM-AFSTAWDPVRPGIVYSSSGPTFATERTEVDV--ISIDVDAADKSS---- 493
Query: 424 PCDVKILTKEETGNNAFPSCSPDGKFLVFRSGRSGHKNLFVLDAVNGEFNGDIRQLTDGP 483
V+ LT NNAFP SPDGK +VFRSGR+GHKNL+++DA GE +G + +LT+G
Sbjct: 494 --SVRRLTTNGK-NNAFPWPSPDGKRIVFRSGRTGHKNLYIMDAEKGE-SGGLWRLTEGA 549
Query: 484 WIDTMPSWSPKGDLIAFSSNRHNPDNVEAFSLYVIKPDGSGLRRIHVAGPEGSGDVDRER 543
W DTM +WSP G+ IAF+S+R +P + +F L++I P+G+GLR++ +G G R
Sbjct: 550 WTDTMCNWSPDGEWIAFASDRESPGS-GSFELFLIHPNGTGLRKLIQSGTGG-------R 601
Query: 544 INHVCFSADGEWLLFTANLGAVMAEPVSWPNQFQPYGDLYVVKLDGSGLRRLTWNGYENG 603
NH FS D + L+FT++ + AEP+S P+ +QPYGD++ VKLDGS +RRLT N YE+G
Sbjct: 602 TNHPIFSPDSKSLVFTSDYAGISAEPISNPHHYQPYGDIFTVKLDGSNVRRLTHNSYEDG 661
Query: 604 TPAWHP 609
TPAW P
Sbjct: 662 TPAWAP 667
Score = 118 (46.6 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 53/173 (30%), Positives = 79/173 (45%)
Query: 6 TIVFTTVGRPYYGFDVFSIKSPFVNAPKFH-EHRLTDGTSINFNAQFVDGQ--------D 56
TI+FTT+GR +Y FD+F++ + P E R+TDG S+NFN F D
Sbjct: 33 TIIFTTLGRSHYEFDIFALST--TQPPSVSGELRITDGESVNFNGYFPSPSPALLSLLPD 90
Query: 57 QTIAFISERSGSPRIYQT-RPGSSKTELLPSIPCSLFHDRPVARNN--KLFFISAHEQPD 113
+T+ + + S IY T R G+S SL++D N+ K S E P
Sbjct: 91 ETLIQMEDSSPLHLIYVTERNGTS----------SLYYDLVYGGNSDFKTKRRSVLEAPS 140
Query: 114 QIFKSWSALYSTDLKASKFTRLTPYGVVDYSPSVSYSGKFIA-VASYESRPWP 165
++ L S+F L+ V + S SG+FI V+++ES P
Sbjct: 141 RV--------QVPL-LSRFDHLSGMTVNSFKDKPSLSGEFIVYVSTHESSGEP 184
Score = 92 (37.4 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 49/191 (25%), Positives = 75/191 (39%)
Query: 319 ASPVKELRMLRLNGSFPSFSPDGGLIVFNHDFELNAGIKIA---KSDGSKRWTLIKDR-T 374
+S V+ L N +FP SPDG IVF + + I K + W L + T
Sbjct: 492 SSSVRRLTTNGKNNAFPWPSPDGKRIVFRSGRTGHKNLYIMDAEKGESGGLWRLTEGAWT 551
Query: 375 AFYNSWSPTEKHVIYTSTGPIFQSERATVQIARVS-FQLDPSDDNNREEIPCDVKILTKE 433
+WSP + + F S+R + F + P+ R K++
Sbjct: 552 DTMCNWSPDGEWIA-------FASDRESPGSGSFELFLIHPNGTGLR-------KLIQSG 597
Query: 434 ETGNNAFPSCSPDGKFLVFRSGRSG---------HKNLFVLDAVNGEFNG-DIRQLTDGP 483
G P SPD K LVF S +G H D + +G ++R+LT
Sbjct: 598 TGGRTNHPIFSPDSKSLVFTSDYAGISAEPISNPHHYQPYGDIFTVKLDGSNVRRLTHNS 657
Query: 484 WIDTMPSWSPK 494
+ D P+W+P+
Sbjct: 658 YEDGTPAWAPR 668
>TAIR|locus:2036982 [details] [associations]
symbol:AT1G21670 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005618 "cell
wall" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] [GO:0019243 "methylglyoxal catabolic process to
D-lactate" evidence=RCA] InterPro:IPR015943 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 GO:GO:0009505
EMBL:AC007727 InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823
ProtClustDB:CLSN2685543 HOGENOM:HOG000240011 EMBL:AY035079
EMBL:BT000981 IPI:IPI00534167 PIR:H86349 RefSeq:NP_564146.1
UniGene:At.11463 ProteinModelPortal:Q9XI11 SMR:Q9XI11 STRING:Q9XI11
PaxDb:Q9XI11 PRIDE:Q9XI11 ProMEX:Q9XI11 EnsemblPlants:AT1G21670.1
GeneID:838769 KEGG:ath:AT1G21670 TAIR:At1g21670 InParanoid:Q9XI11
OMA:NDTIATW PhylomeDB:Q9XI11 ArrayExpress:Q9XI11
Genevestigator:Q9XI11 Uniprot:Q9XI11
Length = 703
Score = 962 (343.7 bits), Expect = 2.7e-109, Sum P(2) = 2.7e-109
Identities = 222/585 (37%), Positives = 322/585 (55%)
Query: 52 VDGQDQTIAFISERSGSPR-----IYQTRPGS-------SKTELLPSIPCSLFHDRPVAR 99
+ QD + +++ER+G+P ++ GS S E + + D PV
Sbjct: 95 IQPQDVHLIYVTERAGTPSLNYDVVHSDNVGSRIQVPLFSGEEQQSGMNVNSMKDTPVLT 154
Query: 100 NNKLFFISAHEQPDQIFKSWSALYSTDLKASKFTRLTPYGVVDYSPSVSYSGKFIAVASY 159
N L +S HE P + SW+A+YST+L+ RLTP G+ D+SP+VS SGK+ AVAS+
Sbjct: 155 NGYLVHVSTHENPGKPMASWAAVYSTELRTKSTRRLTPLGIADFSPAVSPSGKWTAVASF 214
Query: 160 ESRPWPGEF--HELNTDIVVFQESDPNKRVIVCERGGWPTWSGDSTIYFHRQADDGWWSI 217
+ W E+++D+ VF D +RV V E+GGWP W DST+YFHR++DDGW S+
Sbjct: 215 GEKGWTWSMVEKEISSDVYVFLTQDGTQRVKVVEQGGWPRWVDDSTLYFHRKSDDGWISV 274
Query: 218 FRVSFPENLEFLGFPIAPTRVTPPGVHCFTPAAFHDGKR-LAVATRRKNRNFRHIEIYDL 276
+R P+ + RVTPPG+H FTPA + +AVATRR RH+E++DL
Sbjct: 275 YRAILPKTGPVTTKSVTIQRVTPPGLHAFTPATSPNNNNFIAVATRRPGSEIRHVELFDL 334
Query: 277 TLN----------PNFHHYNPFVSANSEFIGYHRFRGESTEGQSTIPHL-EPVASPVKEL 325
N P HH+NPF+S +S +GYH RG++T G+ T +L + + + +L
Sbjct: 335 KKNEFVELTRLVSPKSHHFNPFLSPDSSRVGYHSCRGDAT-GRKTPRNLLQSLKTTSNDL 393
Query: 326 RMLRLNGSFPSFSPDGGLIVFNHDFELNAGIKIAKSDGSKRWTLIKDRTAFYNSWSPTEK 385
+ R +G+FPS SP+G F F G+ + DGS L+ + F W P
Sbjct: 394 SLFRFDGAFPSISPEGDRFAFV-SF---TGVFVVNPDGSGLRQLLP-QMGFGTVWDPIRH 448
Query: 386 HVIYTSTGPIFQSERATVQIARVSFQLDPSDDNNREEIPCDVKILTKEETG-NNAFPSCS 444
++YTS+GP ++ + I ++ PS VK LT TG NNAFP S
Sbjct: 449 GIVYTSSGPALAPGKSQIDILAINVDA-PSPATA-------VKKLTT--TGENNAFPWPS 498
Query: 445 PDGKFLVFRSGRSGHKNLFVLDAVNGEFNGDIRQLTDGPWIDTMPSWSPKGDLIAFSSNR 504
PDGK +VFRS RSG KNL+++DA GE +G + +LT+G W DT+ +WSP G+ I F+SNR
Sbjct: 499 PDGKRIVFRSARSGTKNLYIMDAEKGE-SGGLFRLTNGNWNDTIATWSPDGNWIVFASNR 557
Query: 505 HNPDNVEAFSLYVIKPDGSGLRRIHVAGPEGSGDVDRERINHVCFSADGEWLLFTANLGA 564
P + ++YV+ PDG+GLR++ +G V H FS D + ++FT
Sbjct: 558 EFPGTL-LMNIYVVHPDGTGLRKL---AQNLTGLVSM----HPMFSPDSKRIVFTTIYAG 609
Query: 565 VMAEPVSWPNQFQPYGDLYVVKLDGSGLRRLTWNGYENGTPAWHP 609
+ AE + P+ P +++ V LDGSGL RLT N E+G P W P
Sbjct: 610 ISAEQIGNPHFNVPSSEIFTVNLDGSGLTRLTHNSVEDGPPMWFP 654
Score = 138 (53.6 bits), Expect = 2.7e-109, Sum P(2) = 2.7e-109
Identities = 39/112 (34%), Positives = 56/112 (50%)
Query: 6 TIVFTTVGRPYYGFDVFSIKSPFVNAPKFHEHRLTDGTSINFNAQFVDGQDQTIAFISER 65
TI+FTT+GRP + FD+F++ + EHRLTDG SINFN F I+ + +R
Sbjct: 33 TILFTTIGRPTFEFDIFTLPTSHRPPSPADEHRLTDGKSINFNGYFASPSTALISLLPKR 92
Query: 66 SG-SPR----IYQT-RPGSSKTELLPSIPCSLFHDRPVARNNKLFFISAHEQ 111
+ P+ IY T R G+ PS+ + H V ++ S EQ
Sbjct: 93 TQIQPQDVHLIYVTERAGT------PSLNYDVVHSDNVGSRIQVPLFSGEEQ 138
Score = 60 (26.2 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 35/145 (24%), Positives = 58/145 (40%)
Query: 437 NNAFPSCSPDGKFLVFRSGRSGHKNLFV-LDAVNGEFNGDIRQLTDG--PWIDTMPSWSP 493
N+ + SPDG ++VF S R L + + V+ + G +R+L + P +SP
Sbjct: 538 NDTIATWSPDGNWIVFASNREFPGTLLMNIYVVHPDGTG-LRKLAQNLTGLVSMHPMFSP 596
Query: 494 KGDLIAFSSNRHNPDNVEAFSLYVIKPDGSGLRRIHVAGPEGSGDVDRERINHVCFSADG 553
I F++ + + + P I +GSG R+ H DG
Sbjct: 597 DSKRIVFTTIYAGISAEQIGNPHFNVPSSE----IFTVNLDGSG---LTRLTHNSVE-DG 648
Query: 554 EWLLFTANLGAVMAEPVSWPNQFQP 578
+ F + A V+WP +F P
Sbjct: 649 PPMWFP-KIKAT--GDVAWPKRFGP 670
>ASPGD|ASPL0000037579 [details] [associations]
symbol:AN2818 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR015943 Gene3D:2.130.10.10
Gene3D:2.120.10.30 InterPro:IPR011042 EMBL:BN001306
EMBL:AACD01000050 InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823
RefSeq:XP_660422.1 ProteinModelPortal:Q5B9G2
EnsemblFungi:CADANIAT00010283 GeneID:2874405 KEGG:ani:AN2818.2
HOGENOM:HOG000234674 OMA:NDAHAVW OrthoDB:EOG4XPTQ7 Uniprot:Q5B9G2
Length = 679
Score = 153 (58.9 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 64/241 (26%), Positives = 105/241 (43%)
Query: 375 AFYNSWSPTEKHVIYTSTGPIFQSERATVQ-IARVSFQLDPSDDNNREEIPCDVKILTKE 433
AF SWSP + +++ G FQS +T + R + ++ + E + +
Sbjct: 457 AFQPSWSPDGEWLVF-GEGAWFQSRASTGGWLVRAT-----ANGSEYEVLTASNTSIANT 510
Query: 434 ETGNNAFPSCSPDGKFLVFR--SGRSGHKNLFVLDAVNGEFNG-DIRQLTDGPWIDTMPS 490
N+ FPS S DG +VFR S + + L + N +I LT+ W D +P
Sbjct: 511 SIMNSGFPSYSHDGSKIVFRVWGANSTNGDTGQLGLRVMDLNTRNITALTN-EW-DNLPF 568
Query: 491 WSPKG--DLIAFSSNRHNPDNVEAFSLYVIKPDGSGLRRIHVAGPEGSGDVDRERINHVC 548
+SP G + I F+ V + + IKPDG+ L V G D H
Sbjct: 569 FSPAGFEERIVFTRKT----GVYNYDVCTIKPDGTDLE---VLTSSGGNDA------HAV 615
Query: 549 FSADGEWLLFTANLGAVMAEPVSWPNQFQPYGDLYVVKLDGSGLRRLTWNGYENGTPAWH 608
+S DG ++++ + E + + FQPYG + ++ DG + LT + +E+ P
Sbjct: 616 WSYDGR-IMYSTGMFGFQYECALYDDTFQPYGQVMIMDADGGNKQVLTDSIWEDSMPLLV 674
Query: 609 P 609
P
Sbjct: 675 P 675
Score = 77 (32.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 70/285 (24%), Positives = 108/285 (37%)
Query: 36 EHRLTDGTSINFNAQFVDGQDQTIAFISERSGSPR--IYQTRPGSSKTELLPSIPCSLFH 93
E L ++A F D I F ERSG IY+ RP S +LL S P S+
Sbjct: 88 ERPLLPNPIYEYHASFSPSGDW-ITFTGERSGDGNSDIYRVRPDGSDLQLLLSTP-SMED 145
Query: 94 DRPVARNNKLF-FISAHE-QPDQIF-------KSWSALYSTDLKASKFTRLTPYGVVDYS 144
++ + L ++S I+ K W+ T L G +
Sbjct: 146 SVVLSPDGTLAAYVSTENGYRANIWILDIETGKRWNVT-DTPLSRRSVNETLMNGY--FR 202
Query: 145 PSVSYSGKFIAVASYESRPWPGEFHELNTDIVVFQESDPNKRVIVCERGGWPTWSGDSTI 204
PS S G++IA +S + W G + I ++ + V G SG
Sbjct: 203 PSWSPDGRWIAFSSDRNTEWRGHGDDTYLGISGWEHTQELSIYAVRADG-----SG---- 253
Query: 205 YFHRQADDGWWSIFRVSF-PENLEFLGFPIAPTRVTPPGVHCFTPAAFHDGKRLAVATRR 263
F + A +S+ S+ P+ + + + TR G H P + + V+
Sbjct: 254 -FRQLATKPGYSLGSPSWSPDGKRIVYYEM--TREATWGAH--RPESIDSTSSIIVSVDF 308
Query: 264 KNRNFRHIEIYDLTLNPNFHHYNPFVSANSEFIGYHRFRGESTEG 308
K R +E+ D+ F Y +S N+ IGYH +G S EG
Sbjct: 309 KTGKDRRVEV-DVDGVKAFPQY---LSNNT--IGYH-LKGTSKEG 346
Score = 66 (28.3 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 34/127 (26%), Positives = 54/127 (42%)
Query: 279 NPNFHHYNPFVSANSEFIGYHRFRGE-STEGQSTIPHLEPVASPVKELRMLRLNGSFPSF 337
NP + ++ F S + ++I F GE S +G S I + P S ++ L
Sbjct: 94 NPIYEYHASF-SPSGDWI---TFTGERSGDGNSDIYRVRPDGSDLQLLLSTPSMEDSVVL 149
Query: 338 SPDGGLIVF-NHDFELNAGIKIAKSDGSKRW----TLIKDRTA--------FYNSWSPTE 384
SPDG L + + + A I I + KRW T + R+ F SWSP
Sbjct: 150 SPDGTLAAYVSTENGYRANIWILDIETGKRWNVTDTPLSRRSVNETLMNGYFRPSWSPDG 209
Query: 385 KHVIYTS 391
+ + ++S
Sbjct: 210 RWIAFSS 216
Score = 56 (24.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 330 LNGSF-PSFSPDGGLIVFNHD 349
+NG F PS+SPDG I F+ D
Sbjct: 197 MNGYFRPSWSPDGRWIAFSSD 217
Score = 47 (21.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 342 GLIVFNHDFELNAGIKIAKSDGSK-RWTLIKDRTAFYN-SWSPTEKHVIY 389
G+ + H EL+ I ++DGS R K + + SWSP K ++Y
Sbjct: 232 GISGWEHTQELS--IYAVRADGSGFRQLATKPGYSLGSPSWSPDGKRIVY 279
Score = 43 (20.2 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 332 GSFPSFSPDGGLIVF 346
GS PS+SPDG IV+
Sbjct: 266 GS-PSWSPDGKRIVY 279
>TIGR_CMR|CBU_0090 [details] [associations]
symbol:CBU_0090 "tolB protein" species:227377 "Coxiella
burnetii RSA 493" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0006810 "transport" evidence=ISS] [GO:0019534 "toxin
transporter activity" evidence=ISS] HAMAP:MF_00671
InterPro:IPR007195 InterPro:IPR014167 InterPro:IPR015943
Pfam:PF04052 Gene3D:2.130.10.10 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0042597 GO:GO:0017038
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823 KO:K03641
HOGENOM:HOG000004098 OMA:VREPSWG Gene3D:3.40.50.10070
SUPFAM:SSF52964 TIGRFAMs:TIGR02800 RefSeq:NP_819142.2
ProteinModelPortal:Q83F59 GeneID:1207960 KEGG:cbu:CBU_0090
PATRIC:17928857 ProtClustDB:CLSK913826
BioCyc:CBUR227377:GJ7S-90-MONOMER Uniprot:Q83F59
Length = 437
Score = 149 (57.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 81/354 (22%), Positives = 140/354 (39%)
Query: 278 LNP-NFHHYNPFVSANSEFIGYHRFRGESTEGQSTIPHLEPVASPVKELRMLRLNGSFPS 336
+NP Y + + F +R ES + L +A + +L +L G
Sbjct: 107 INPLGMRRYRVAFTLINVFDSNNRLLSESFNVNAK--ELRNLAHHISDLIYQKLTGVRGV 164
Query: 337 FSPDGGLIVFNHDFELNAG---IKIAKSDG-SKRWTLIKDRTAFYNSWSPTEKHVIYTST 392
FS ++ E A +++A +DG + + L+ D +WSP + Y S
Sbjct: 165 FSTKIAYVLVQASSENTAAKYTLEVADADGFNPQPLLVSDMPIMSPTWSPDGNKIAYVS- 223
Query: 393 GPIFQSERATVQIARVSFQLDPSDDNNREEIPCDVKILTKEETGNNAFPSCSPDGKFLVF 452
F+ RA + + ++ R+ + E G N P+ SPDGK L
Sbjct: 224 ---FEGHRAAIYLQDLA-------TGRRQRL--------SEAPGINGAPAFSPDGKQLAL 265
Query: 453 RSGRSGHKNLFVLDAVNGEFNGDIRQLTDGPWIDTMPSWSPKGDLIAFSSNRHNPDNVEA 512
++G+ +++L+ +G +R++T G IDT P+WSP G + F+SNR +
Sbjct: 266 VLTKTGNPKIYILNLADGH----LREITKGWSIDTEPAWSPDGKSLLFTSNRDGTPQIYN 321
Query: 513 FSLYVIKPDGSGLRRIHVAGP----EGSGDVDRERINHVCFSADGEWLLFTANLGAVMAE 568
+S + R + A P +G + R N + A + L T + +
Sbjct: 322 YSFADGSINRVTYRGDYNARPSFMPDGKSIIMMHRENGLFGIARQD--LSTGQVQILSES 379
Query: 569 PVSWPNQFQPYGDL--YVVKLDGSG-LRRLTWNGY-------ENGT---PAWHP 609
P G + Y ++ G G L +++ +G NG PAW P
Sbjct: 380 GTDESPSLAPNGKMAIYAMEYGGRGVLAQVSIDGQIKLRLPARNGNVQEPAWSP 433
>TIGR_CMR|SPO_3109 [details] [associations]
symbol:SPO_3109 "tolB protein, putative" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0006810 "transport" evidence=ISS]
[GO:0019534 "toxin transporter activity" evidence=ISS]
HAMAP:MF_00671 InterPro:IPR007195 InterPro:IPR014167
InterPro:IPR015943 Pfam:PF04052 Gene3D:2.130.10.10 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0042597 GO:GO:0017038
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823 KO:K03641
OMA:VREPSWG Gene3D:3.40.50.10070 SUPFAM:SSF52964 TIGRFAMs:TIGR02800
RefSeq:YP_168312.1 ProteinModelPortal:Q5LNU4 DNASU:3193729
GeneID:3193729 KEGG:sil:SPO3109 PATRIC:23379663
HOGENOM:HOG000004097 ProtClustDB:PRK05137 Uniprot:Q5LNU4
Length = 439
Score = 131 (51.2 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 42/138 (30%), Positives = 62/138 (44%)
Query: 441 PSCSPDGKFLVFRSGRSGHKNLFVLDAVNGEFNGDIRQLTDGPWIDTMPSWSPKGDLIAF 500
PS +PDG +VF S RSG L+V+ A GE +++ G P WSP+GDLIAF
Sbjct: 299 PSYAPDGSRIVFESDRSGTPQLYVMSAAGGEAT----RISFGQGRYGTPVWSPRGDLIAF 354
Query: 501 SSNRHNPDNVEAFSLYVIKPDGSGLRRIHVA----GPEGSGDVDRERINHVCFSADGEWL 556
+ F + V++ DGS R + + GP S + A G
Sbjct: 355 TKQSKG-----RFHIGVMRADGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGASGRAA 409
Query: 557 LFTANLGAVMAEPVSWPN 574
L++ ++ PV P+
Sbjct: 410 LYSVDISGRNLRPVRTPD 427
Score = 62 (26.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 33/126 (26%), Positives = 56/126 (44%)
Query: 39 LTDGTSINFNAQFVDGQDQTIAFISERSGSPRIYQTRPGSSKTELLPSIPCSL-FHDR-- 95
LTD +SI +F D+ + + S + G PRI+ G + +L S ++ F R
Sbjct: 200 LTDSSSIVLAPRFSPTGDRVL-YTSYQGGFPRIHILDVGQVQQRVLQSQDGTMSFAPRFS 258
Query: 96 PVARNNKLFFISAHEQPDQIFKSWSALYSTDLKASKFTRLTPYGVVDYSPSVSYSGKFIA 155
P + LF ++ D LY+ ++ + + TRLT ++ +PS + G I
Sbjct: 259 PDGQT-VLFSLAQGGNTD--------LYAMNIASGQSTRLTSAPSIETAPSYAPDGSRIV 309
Query: 156 VASYES 161
S S
Sbjct: 310 FESDRS 315
>UNIPROTKB|Q74H67 [details] [associations]
symbol:tolB "Protein TolB" species:243231 "Geobacter
sulfurreducens PCA" [GO:0006810 "transport" evidence=ISS]
[GO:0019534 "toxin transporter activity" evidence=ISS]
HAMAP:MF_00671 InterPro:IPR007195 InterPro:IPR014167
InterPro:IPR015943 Pfam:PF04052 Gene3D:2.130.10.10 GO:GO:0019534
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0042597 GO:GO:0017038
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823 KO:K03641
HOGENOM:HOG000004098 OMA:VREPSWG Gene3D:3.40.50.10070
SUPFAM:SSF52964 TIGRFAMs:TIGR02800 RefSeq:NP_951087.1
ProteinModelPortal:Q74H67 DNASU:2688562 GeneID:2688562
KEGG:gsu:GSU0025 PATRIC:22022787 ProtClustDB:CLSK827594
BioCyc:GSUL243231:GH27-45-MONOMER Uniprot:Q74H67
Length = 432
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 64/227 (28%), Positives = 100/227 (44%)
Query: 404 QIARVSFQLDPSDDNNREEIPCDVKILTKEETGNNAFPSCSPDGKFLVFRSGRSGHKNLF 463
++A S++ + D R EI + + G N + SPDGK L R G+ ++
Sbjct: 216 ELAYTSYRRG-NPDLFRREIFTGTEAVVSSHRGINVTGTWSPDGKQLALAMSRDGNSEIY 274
Query: 464 VLDAVNGEFNGDIRQLTDGPWIDTMPSWSPKGDLIAFSSNRHNPDNVEAFSLYVIKPDGS 523
+ +G D R+LT ID P+WSP G IAF S+R V +++ DGS
Sbjct: 275 AISR-DGR---DPRRLTTHQAIDVSPAWSPDGKRIAFVSDRLGKPQV-----FIMNADGS 325
Query: 524 GLRRIHVAG-----PEGS--GD---VDRERINHVCFS--ADGEWLLFTANLGAVMAEPVS 571
+RR+ +G P S GD R+ +S DG + G+ E
Sbjct: 326 DVRRLTTSGAYNVSPRWSPKGDRLVYCRQEGGFQIYSIATDGTGDTRLTSEGS--NEHPR 383
Query: 572 W-PN-QFQPY------GD-LYVVKLDGSGLRRLTWNGYENGTPAWHP 609
W P+ +F + G+ +YV++ DGSG R+ + + P W P
Sbjct: 384 WSPDGRFLTFSSTRDGGEAIYVMRSDGSGQTRVYRSKGKASHPTWSP 430
Score = 87 (35.7 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 430 LTKEETGNNAFPSCSPDGKFLVFRSGRSGHKNLFVLDAVNGEFNGDIRQL-TDGPWIDTM 488
LT E G+N P SPDG+FL F S R G + ++V+ + +G +G R + G +
Sbjct: 373 LTSE--GSNEHPRWSPDGRFLTFSSTRDGGEAIYVMRS-DG--SGQTRVYRSKGK--ASH 425
Query: 489 PSWSPK 494
P+WSP+
Sbjct: 426 PTWSPR 431
Score = 79 (32.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 48/187 (25%), Positives = 79/187 (42%)
Query: 38 RLTDGTSINFNAQFV-DGQDQTIAFISERSGSPRIYQTRPGSSKTELLPSIPCSLFHDRP 96
RLT SIN N F +G++ +A+ S R G+P +++ R + TE + S +
Sbjct: 197 RLTKNRSINLNPDFSPNGRE--LAYTSYRRGNPDLFR-REIFTGTEAVVSSHRGINVTGT 253
Query: 97 VARNNKLFFISAHEQPDQIFKSWSALYSTDLKASKFTRLTPYGVVDYSPSVSYSGKFIAV 156
+ + K ++ + S +Y+ RLT + +D SP+ S GK IA
Sbjct: 254 WSPDGKQLALAMSRDGN------SEIYAISRDGRDPRRLTTHQAIDVSPAWSPDGKRIAF 307
Query: 157 ASYESRPWPGEFHELNTDIVVFQESDPNKRVIVCERGGWPTWS--GDSTIYFHRQADDGW 214
S R + +N D SD + P WS GD +Y RQ +G
Sbjct: 308 VS--DRLGKPQVFIMNAD-----GSDVRRLTTSGAYNVSPRWSPKGDRLVYC-RQ--EGG 357
Query: 215 WSIFRVS 221
+ I+ ++
Sbjct: 358 FQIYSIA 364
>TIGR_CMR|GSU_0025 [details] [associations]
symbol:GSU_0025 "tolB protein" species:243231 "Geobacter
sulfurreducens PCA" [GO:0006810 "transport" evidence=ISS]
[GO:0019534 "toxin transporter activity" evidence=ISS]
HAMAP:MF_00671 InterPro:IPR007195 InterPro:IPR014167
InterPro:IPR015943 Pfam:PF04052 Gene3D:2.130.10.10 GO:GO:0019534
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0042597 GO:GO:0017038
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823 KO:K03641
HOGENOM:HOG000004098 OMA:VREPSWG Gene3D:3.40.50.10070
SUPFAM:SSF52964 TIGRFAMs:TIGR02800 RefSeq:NP_951087.1
ProteinModelPortal:Q74H67 DNASU:2688562 GeneID:2688562
KEGG:gsu:GSU0025 PATRIC:22022787 ProtClustDB:CLSK827594
BioCyc:GSUL243231:GH27-45-MONOMER Uniprot:Q74H67
Length = 432
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 64/227 (28%), Positives = 100/227 (44%)
Query: 404 QIARVSFQLDPSDDNNREEIPCDVKILTKEETGNNAFPSCSPDGKFLVFRSGRSGHKNLF 463
++A S++ + D R EI + + G N + SPDGK L R G+ ++
Sbjct: 216 ELAYTSYRRG-NPDLFRREIFTGTEAVVSSHRGINVTGTWSPDGKQLALAMSRDGNSEIY 274
Query: 464 VLDAVNGEFNGDIRQLTDGPWIDTMPSWSPKGDLIAFSSNRHNPDNVEAFSLYVIKPDGS 523
+ +G D R+LT ID P+WSP G IAF S+R V +++ DGS
Sbjct: 275 AISR-DGR---DPRRLTTHQAIDVSPAWSPDGKRIAFVSDRLGKPQV-----FIMNADGS 325
Query: 524 GLRRIHVAG-----PEGS--GD---VDRERINHVCFS--ADGEWLLFTANLGAVMAEPVS 571
+RR+ +G P S GD R+ +S DG + G+ E
Sbjct: 326 DVRRLTTSGAYNVSPRWSPKGDRLVYCRQEGGFQIYSIATDGTGDTRLTSEGS--NEHPR 383
Query: 572 W-PN-QFQPY------GD-LYVVKLDGSGLRRLTWNGYENGTPAWHP 609
W P+ +F + G+ +YV++ DGSG R+ + + P W P
Sbjct: 384 WSPDGRFLTFSSTRDGGEAIYVMRSDGSGQTRVYRSKGKASHPTWSP 430
Score = 87 (35.7 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 430 LTKEETGNNAFPSCSPDGKFLVFRSGRSGHKNLFVLDAVNGEFNGDIRQL-TDGPWIDTM 488
LT E G+N P SPDG+FL F S R G + ++V+ + +G +G R + G +
Sbjct: 373 LTSE--GSNEHPRWSPDGRFLTFSSTRDGGEAIYVMRS-DG--SGQTRVYRSKGK--ASH 425
Query: 489 PSWSPK 494
P+WSP+
Sbjct: 426 PTWSPR 431
Score = 79 (32.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 48/187 (25%), Positives = 79/187 (42%)
Query: 38 RLTDGTSINFNAQFV-DGQDQTIAFISERSGSPRIYQTRPGSSKTELLPSIPCSLFHDRP 96
RLT SIN N F +G++ +A+ S R G+P +++ R + TE + S +
Sbjct: 197 RLTKNRSINLNPDFSPNGRE--LAYTSYRRGNPDLFR-REIFTGTEAVVSSHRGINVTGT 253
Query: 97 VARNNKLFFISAHEQPDQIFKSWSALYSTDLKASKFTRLTPYGVVDYSPSVSYSGKFIAV 156
+ + K ++ + S +Y+ RLT + +D SP+ S GK IA
Sbjct: 254 WSPDGKQLALAMSRDGN------SEIYAISRDGRDPRRLTTHQAIDVSPAWSPDGKRIAF 307
Query: 157 ASYESRPWPGEFHELNTDIVVFQESDPNKRVIVCERGGWPTWS--GDSTIYFHRQADDGW 214
S R + +N D SD + P WS GD +Y RQ +G
Sbjct: 308 VS--DRLGKPQVFIMNAD-----GSDVRRLTTSGAYNVSPRWSPKGDRLVYC-RQ--EGG 357
Query: 215 WSIFRVS 221
+ I+ ++
Sbjct: 358 FQIYSIA 364
>UNIPROTKB|P0A855 [details] [associations]
symbol:tolB species:83333 "Escherichia coli K-12"
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043213 "bacteriocin transport" evidence=IEA;IMP] [GO:0017038
"protein import" evidence=IEA;IMP] [GO:0015031 "protein transport"
evidence=IMP] [GO:0042597 "periplasmic space" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] HAMAP:MF_00671 InterPro:IPR002469 InterPro:IPR007195
InterPro:IPR014167 InterPro:IPR015943 Pfam:PF00930 Pfam:PF04052
GO:GO:0016020 Gene3D:2.130.10.10 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006508
GO:GO:0030288 GO:GO:0043213 GO:GO:0017038 EMBL:X65796 EMBL:M28232
PDB:2HQS PDB:2W8B PDBsum:2HQS PDBsum:2W8B TCDB:2.C.1.2.1
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823 KO:K03641
HOGENOM:HOG000004098 OMA:VREPSWG Gene3D:3.40.50.10070
SUPFAM:SSF52964 TIGRFAMs:TIGR02800 PIR:C64810 RefSeq:NP_415268.1
RefSeq:YP_489020.1 PDB:1C5K PDB:1CRZ PDB:2IVZ PDB:3IAX PDBsum:1C5K
PDBsum:1CRZ PDBsum:2IVZ PDBsum:3IAX ProteinModelPortal:P0A855
SMR:P0A855 DIP:DIP-48262N SWISS-2DPAGE:P0A855 PaxDb:P0A855
PRIDE:P0A855 EnsemblBacteria:EBESCT00000001423
EnsemblBacteria:EBESCT00000017030 GeneID:12932834 GeneID:945429
KEGG:ecj:Y75_p0720 KEGG:eco:b0740 PATRIC:32116679 EchoBASE:EB1001
EcoGene:EG11008 ProtClustDB:PRK03629 BioCyc:EcoCyc:EG11008-MONOMER
BioCyc:ECOL316407:JW5100-MONOMER EvolutionaryTrace:P0A855
Genevestigator:P0A855 Uniprot:P0A855
Length = 430
Score = 137 (53.3 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 437 NNAFPSCSPDGKFLVFRSGRSGHKNLFVLDAVNGEFNGDIRQLTDGPWIDTMPSWSPKGD 496
+N P+ SPDG L F ++G NL+V+D +G+ IRQ+TDG +T P+W P
Sbjct: 245 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ----IRQVTDGRSNNTEPTWFPDSQ 300
Query: 497 LIAFSSNRHNPDNVEAFSLYVIKPDGSGLRRIHVAGPEGS-GDVDRERINHVCFSADG 553
+AF+S++ V Y + +G +RI G + DV + V S++G
Sbjct: 301 NLAFTSDQAGRPQV-----YKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG 353
>TIGR_CMR|CPS_1731 [details] [associations]
symbol:CPS_1731 "tolB protein" species:167879 "Colwellia
psychrerythraea 34H" [GO:0042891 "antibiotic transport"
evidence=ISS] [GO:0042895 "antibiotic transporter activity"
evidence=ISS] HAMAP:MF_00671 InterPro:IPR007195 InterPro:IPR014167
InterPro:IPR015943 Pfam:PF04052 Gene3D:2.130.10.10 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0042597 GO:GO:0017038
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823 KO:K03641
RefSeq:YP_268469.1 ProteinModelPortal:Q484P6 STRING:Q484P6
GeneID:3519634 KEGG:cps:CPS_1731 PATRIC:21466631
HOGENOM:HOG000004098 OMA:VREPSWG ProtClustDB:PRK04792
BioCyc:CPSY167879:GI48-1808-MONOMER Gene3D:3.40.50.10070
SUPFAM:SSF52964 TIGRFAMs:TIGR02800 Uniprot:Q484P6
Length = 449
Score = 128 (50.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 43/155 (27%), Positives = 72/155 (46%)
Query: 385 KHVIYTSTGPIFQSERATV--QIARVSFQLDPSDDNNREEIPCDVKILTKEETGNNAFPS 442
+HV+ +S P+ Q+A VSF+ + ++ + I V+ G N+ P
Sbjct: 211 EHVLLSSKEPLMSPSWHPNGDQLAYVSFENRQAQIHSID-IYTGVRKSISSFNGINSAPR 269
Query: 443 CSPDGKFLVFRSGRSGHKNLFVLDAVNGEFNGDIRQLTDGPWIDTMPSWSPKGDLIAFSS 502
SPDGK + + G+ +L+V++ + +R++T IDT PSW+P G+ + FSS
Sbjct: 270 FSPDGKSMAMVLSKDGNPDLYVMELATMK----LRRITRNRAIDTEPSWTPDGNSLIFSS 325
Query: 503 NRHNPDNVEAFSLYVIKPDGSGLRRIHVAGPEGSG 537
R LY + G +RR+ G G
Sbjct: 326 ERGGKPQ-----LYRVDLAGGKVRRLTFDGEVNLG 355
>TIGR_CMR|SO_2748 [details] [associations]
symbol:SO_2748 "tolB protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0006810 "transport" evidence=ISS] [GO:0019534
"toxin transporter activity" evidence=ISS] HAMAP:MF_00671
InterPro:IPR007195 InterPro:IPR014167 Pfam:PF04052
Gene3D:2.120.10.30 InterPro:IPR011042 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0042597 GO:GO:0017038
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823 KO:K03641
HOGENOM:HOG000004098 OMA:VREPSWG ProtClustDB:PRK04792
Gene3D:3.40.50.10070 SUPFAM:SSF52964 TIGRFAMs:TIGR02800
RefSeq:NP_718332.1 ProteinModelPortal:Q8EDJ8 GeneID:1170448
KEGG:son:SO_2748 PATRIC:23525129 Uniprot:Q8EDJ8
Length = 442
Score = 122 (48.0 bits), Expect = 0.00034, P = 0.00034
Identities = 72/297 (24%), Positives = 115/297 (38%)
Query: 329 RLNGSFPSFSPDGGLIVFNHDFELNAGIKIAKSDGSKRWTLIKDRTAFYN-SWSPTEKHV 387
+L G +F +V NH + + IA DG L++ + +WSP + +
Sbjct: 167 KLTGIRGAFLTRISYVVVNHSQKAAYSLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRRL 226
Query: 388 IYTSTGPIFQSERATVQIARVSFQLDPSDDNNREEIPCDVKILTKEETGNNAFPSCSPDG 447
Y S F++++A + + +++ V+ +G N PS SPDG
Sbjct: 227 AYVS----FENKKAEIFV---------------QDLYTQVRTKVSSFSGINGAPSFSPDG 267
Query: 448 KFLVFRSGRSGHKNLFVLDAVNGEFNGDIRQLTDGPWIDTMPSWSPKGDLIAFSSNRHN- 506
K L + G ++V+D I+++T+ IDT PSW P G + F+S R
Sbjct: 268 KSLAVTLSKDGQPEIYVIDIATKA----IKRITNHYSIDTEPSWYPDGKSLLFTSERGGR 323
Query: 507 PD--NVEAFSLYVIKPDGSGLRRIHVA-GPEGSGDVDRERINHVCFSADGEWLL-FTANL 562
P V+ S V + G + + P+G + R N A + F L
Sbjct: 324 PQLYRVDLNSGKVTRETFEGEWNLGGSITPDGRSMIFVNRTNGKFNIARMDLSTRFMQVL 383
Query: 563 GAVMAE--PVSWPNQFQP-YGD-------LYVVKLDGSGLRRLTWNGYENGTPAWHP 609
+ + P PN YG L V DG RL E +P+W P
Sbjct: 384 TSTRLDESPSVAPNGTMVIYGTTHQGKQVLAAVSTDGRFKARLPAGQGEVKSPSWSP 440
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.138 0.439 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 642 642 0.00093 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 624 (66 KB)
Total size of DFA: 391 KB (2188 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.63u 0.11s 53.74t Elapsed: 00:00:02
Total cpu time: 53.63u 0.11s 53.74t Elapsed: 00:00:02
Start: Sat May 11 04:01:09 2013 End: Sat May 11 04:01:11 2013