Query 039504
Match_columns 240
No_of_seqs 130 out of 1219
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 10:20:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039504.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039504hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0365 Acs Acyl-coenzyme A sy 100.0 4E-39 8.7E-44 262.5 20.8 222 3-236 150-374 (528)
2 KOG1176 Acyl-CoA synthetase [L 100.0 1.7E-38 3.6E-43 260.0 22.1 214 18-240 178-391 (537)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 1.3E-37 2.8E-42 260.7 21.7 212 21-240 168-384 (534)
4 PRK06334 long chain fatty acid 100.0 1.1E-37 2.4E-42 261.9 21.3 213 20-240 179-392 (539)
5 PLN02246 4-coumarate--CoA liga 100.0 1.6E-36 3.4E-41 255.2 24.4 223 17-239 172-394 (537)
6 PLN02574 4-coumarate--CoA liga 100.0 4.1E-36 9E-41 253.7 23.8 219 18-239 192-412 (560)
7 KOG1177 Long chain fatty acid 100.0 1.2E-36 2.7E-41 236.6 15.4 232 2-240 206-444 (596)
8 PRK07788 acyl-CoA synthetase; 100.0 8.4E-36 1.8E-40 251.4 21.0 207 22-239 205-413 (549)
9 PTZ00342 acyl-CoA synthetase; 100.0 1E-35 2.3E-40 255.4 19.8 213 18-240 298-553 (746)
10 PRK08314 long-chain-fatty-acid 100.0 7.5E-35 1.6E-39 245.5 23.4 211 19-239 185-395 (546)
11 PLN03051 acyl-activating enzym 100.0 4E-35 8.6E-40 244.5 20.7 208 21-238 116-329 (499)
12 PLN02654 acetate-CoA ligase 100.0 4.8E-35 1E-39 251.1 21.1 214 18-239 269-493 (666)
13 PRK04319 acetyl-CoA synthetase 100.0 1.1E-34 2.5E-39 245.4 22.3 226 4-239 185-415 (570)
14 PRK07656 long-chain-fatty-acid 100.0 1.7E-34 3.7E-39 241.6 22.8 228 4-239 146-374 (513)
15 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.6E-34 3.4E-39 247.0 22.0 228 5-239 217-455 (625)
16 PRK13295 cyclohexanecarboxylat 100.0 2.3E-34 5.1E-39 242.5 22.7 211 20-239 193-403 (547)
17 TIGR02316 propion_prpE propion 100.0 1.3E-34 2.8E-39 247.4 21.2 213 20-237 228-446 (628)
18 PRK07529 AMP-binding domain pr 100.0 2.7E-34 5.8E-39 245.5 22.9 227 4-240 191-429 (632)
19 PLN02614 long-chain acyl-CoA s 100.0 7.8E-35 1.7E-39 249.5 18.8 230 4-240 202-480 (666)
20 PRK00174 acetyl-CoA synthetase 100.0 3.4E-34 7.4E-39 245.3 22.3 228 5-239 226-463 (637)
21 PF00501 AMP-binding: AMP-bind 100.0 1.5E-35 3.2E-40 242.1 12.6 211 22-240 153-371 (417)
22 PRK08633 2-acyl-glycerophospho 100.0 2.7E-34 5.8E-39 260.3 21.7 217 19-240 777-999 (1146)
23 KOG1256 Long-chain acyl-CoA sy 100.0 6.8E-35 1.5E-39 238.8 15.5 231 2-240 231-510 (691)
24 PLN02330 4-coumarate--CoA liga 100.0 1.2E-33 2.6E-38 238.2 23.6 219 19-239 179-399 (546)
25 COG1022 FAA1 Long-chain acyl-C 100.0 1.4E-34 3E-39 239.2 16.7 198 19-240 186-432 (613)
26 PLN02736 long-chain acyl-CoA s 100.0 2.5E-34 5.3E-39 246.5 18.9 225 4-240 200-470 (651)
27 PRK13382 acyl-CoA synthetase; 100.0 9.6E-34 2.1E-38 238.2 21.7 209 21-240 193-403 (537)
28 PRK08316 acyl-CoA synthetase; 100.0 1.3E-33 2.8E-38 236.8 22.4 215 17-239 164-378 (523)
29 PRK06187 long-chain-fatty-acid 100.0 1.7E-33 3.7E-38 235.9 22.8 229 4-239 147-378 (521)
30 PRK08315 AMP-binding domain pr 100.0 1.5E-33 3.3E-38 238.2 22.2 214 20-239 195-409 (559)
31 PTZ00237 acetyl-CoA synthetase 100.0 6.8E-34 1.5E-38 243.2 20.2 209 18-236 248-467 (647)
32 PRK07638 acyl-CoA synthetase; 100.0 2.3E-33 5E-38 233.4 22.3 204 22-239 141-344 (487)
33 PLN02861 long-chain-fatty-acid 100.0 5.8E-34 1.3E-38 244.2 18.8 230 4-240 200-477 (660)
34 PRK06839 acyl-CoA synthetase; 100.0 3.7E-33 8E-38 232.7 22.5 210 20-239 145-354 (496)
35 PRK06145 acyl-CoA synthetase; 100.0 4.8E-33 1E-37 232.1 23.0 212 20-239 145-356 (497)
36 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 2.7E-33 5.9E-38 235.6 21.7 211 20-239 191-401 (538)
37 PRK05605 long-chain-fatty-acid 100.0 3.8E-33 8.3E-38 236.4 22.7 212 20-239 215-428 (573)
38 PRK07514 malonyl-CoA synthase; 100.0 4.3E-33 9.4E-38 232.7 22.3 210 18-239 150-359 (504)
39 PLN02860 o-succinylbenzoate-Co 100.0 2.9E-33 6.4E-38 236.5 20.8 210 20-240 168-397 (563)
40 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 6.3E-33 1.4E-37 232.9 22.6 211 19-239 178-390 (527)
41 PRK10524 prpE propionyl-CoA sy 100.0 3.1E-33 6.8E-38 239.2 20.9 212 20-236 229-446 (629)
42 PLN03052 acetate--CoA ligase; 100.0 4.3E-33 9.3E-38 240.2 21.8 206 21-236 353-561 (728)
43 PRK07786 long-chain-fatty-acid 100.0 4.2E-33 9.2E-38 234.6 21.1 227 3-239 153-382 (542)
44 PRK06087 short chain acyl-CoA 100.0 8.2E-33 1.8E-37 233.2 22.9 212 19-240 182-393 (547)
45 PRK12467 peptide synthase; Pro 100.0 1.9E-33 4.2E-38 274.2 21.4 215 18-240 3231-3447(3956)
46 PRK09274 peptide synthase; Pro 100.0 3.5E-33 7.6E-38 235.6 20.3 210 19-240 169-399 (552)
47 TIGR03098 ligase_PEP_1 acyl-Co 100.0 7.2E-33 1.6E-37 231.9 21.9 209 20-239 157-365 (515)
48 PRK06060 acyl-CoA synthetase; 100.0 2.4E-33 5.2E-38 242.5 19.1 209 20-239 141-350 (705)
49 PRK10946 entE enterobactin syn 100.0 1.2E-32 2.5E-37 231.6 21.8 212 18-239 176-391 (536)
50 TIGR02262 benz_CoA_lig benzoat 100.0 2E-32 4.4E-37 228.9 23.0 211 19-239 156-367 (508)
51 PRK05851 long-chain-fatty-acid 100.0 2.6E-33 5.6E-38 235.0 17.6 216 20-240 148-384 (525)
52 PRK05677 long-chain-fatty-acid 100.0 2.7E-32 5.8E-37 230.7 22.4 212 19-239 202-415 (562)
53 PRK12583 acyl-CoA synthetase; 100.0 2.2E-32 4.9E-37 231.0 21.5 212 21-239 198-410 (558)
54 PRK12467 peptide synthase; Pro 100.0 1.1E-32 2.4E-37 268.9 21.5 216 18-240 1712-1930(3956)
55 PRK03640 O-succinylbenzoic aci 100.0 5.2E-32 1.1E-36 225.1 22.5 208 19-239 136-343 (483)
56 PRK07787 acyl-CoA synthetase; 100.0 2.8E-32 6.1E-37 226.0 20.7 206 21-239 125-332 (471)
57 PLN02387 long-chain-fatty-acid 100.0 1.1E-32 2.3E-37 237.4 17.6 227 4-240 229-514 (696)
58 PRK07008 long-chain-fatty-acid 100.0 6.9E-32 1.5E-36 227.1 22.0 231 4-239 156-395 (539)
59 PRK07769 long-chain-fatty-acid 100.0 1.3E-32 2.8E-37 235.4 17.5 216 20-240 176-430 (631)
60 PRK06710 long-chain-fatty-acid 100.0 1.5E-31 3.2E-36 226.3 23.6 210 22-239 204-414 (563)
61 PRK12316 peptide synthase; Pro 100.0 2.4E-32 5.2E-37 270.1 21.5 216 18-240 4688-4905(5163)
62 PRK12476 putative fatty-acid-- 100.0 1.2E-32 2.6E-37 234.8 16.8 216 20-240 189-441 (612)
63 PRK10252 entF enterobactin syn 100.0 3.8E-32 8.3E-37 248.8 21.2 213 21-240 595-814 (1296)
64 TIGR01734 D-ala-DACP-lig D-ala 100.0 8E-32 1.7E-36 225.0 21.1 214 20-239 137-353 (502)
65 PRK08043 bifunctional acyl-[ac 100.0 4.3E-32 9.2E-37 235.0 19.4 204 20-240 361-565 (718)
66 PRK08180 feruloyl-CoA synthase 100.0 5.6E-32 1.2E-36 230.7 19.9 204 20-240 205-423 (614)
67 TIGR03443 alpha_am_amid L-amin 100.0 4.6E-32 1E-36 249.4 20.6 212 21-240 412-633 (1389)
68 PTZ00216 acyl-CoA synthetase; 100.0 3.7E-32 8.1E-37 234.5 18.8 226 4-240 240-519 (700)
69 PRK06188 acyl-CoA synthetase; 100.0 1.4E-31 3.1E-36 224.6 21.8 210 22-239 166-376 (524)
70 PRK12316 peptide synthase; Pro 100.0 4.8E-32 1E-36 268.0 20.9 216 18-240 2140-2357(5163)
71 PRK12492 long-chain-fatty-acid 100.0 2.6E-31 5.6E-36 224.7 22.4 215 19-239 202-423 (562)
72 PRK09088 acyl-CoA synthetase; 100.0 4.1E-31 8.9E-36 220.0 23.2 211 20-239 131-343 (488)
73 PRK03584 acetoacetyl-CoA synth 100.0 2.2E-31 4.7E-36 228.7 21.7 207 18-236 257-471 (655)
74 TIGR03205 pimA dicarboxylate-- 100.0 6.3E-31 1.4E-35 221.5 23.8 216 19-239 187-404 (541)
75 PRK07470 acyl-CoA synthetase; 100.0 2.4E-31 5.1E-36 223.4 21.1 215 19-239 158-377 (528)
76 PRK04813 D-alanine--poly(phosp 100.0 2.7E-31 5.9E-36 221.8 21.3 215 19-239 138-355 (503)
77 PRK05852 acyl-CoA synthetase; 100.0 1.9E-31 4.1E-36 224.3 20.5 211 23-240 175-392 (534)
78 PRK05857 acyl-CoA synthetase; 100.0 1.3E-31 2.8E-36 225.5 18.9 216 20-239 165-385 (540)
79 TIGR01733 AA-adenyl-dom amino 100.0 1.7E-31 3.7E-36 217.4 19.0 209 21-239 117-329 (408)
80 PRK06155 crotonobetaine/carnit 100.0 5.9E-31 1.3E-35 221.5 22.2 202 20-236 176-377 (542)
81 PRK06178 acyl-CoA synthetase; 100.0 1.1E-30 2.4E-35 221.1 23.7 218 19-239 204-425 (567)
82 KOG1180 Acyl-CoA synthetase [L 100.0 3E-32 6.5E-37 215.6 12.6 228 2-239 214-494 (678)
83 PLN02430 long-chain-fatty-acid 100.0 2.3E-31 5E-36 227.9 19.1 230 4-240 199-477 (660)
84 PRK07059 Long-chain-fatty-acid 100.0 1.3E-30 2.8E-35 220.3 22.6 216 18-239 198-417 (557)
85 PRK06018 putative acyl-CoA syn 100.0 1.3E-30 2.9E-35 219.5 22.0 213 19-239 172-395 (542)
86 PRK13383 acyl-CoA synthetase; 100.0 7.7E-31 1.7E-35 219.7 20.0 209 22-239 172-382 (516)
87 PRK05691 peptide synthase; Val 100.0 4.6E-31 9.9E-36 259.4 20.9 210 20-240 1269-1481(4334)
88 PRK08008 caiC putative crotono 100.0 3.5E-30 7.6E-35 215.9 23.0 206 19-235 168-373 (517)
89 PRK12582 acyl-CoA synthetase; 100.0 6.5E-31 1.4E-35 224.5 18.8 204 20-240 216-435 (624)
90 PRK05620 long-chain-fatty-acid 100.0 2.1E-30 4.6E-35 219.7 21.6 230 4-239 161-396 (576)
91 PRK12406 long-chain-fatty-acid 100.0 3.5E-30 7.6E-35 215.5 21.7 208 21-239 149-361 (509)
92 PRK05691 peptide synthase; Val 100.0 1.4E-30 2.9E-35 256.2 21.6 212 19-240 3864-4078(4334)
93 PRK08751 putative long-chain f 100.0 5.8E-30 1.3E-34 216.5 22.5 215 19-239 203-419 (560)
94 PRK06164 acyl-CoA synthetase; 100.0 2.4E-30 5.1E-35 217.9 20.0 209 22-240 179-389 (540)
95 TIGR01217 ac_ac_CoA_syn acetoa 100.0 3.4E-30 7.3E-35 220.9 20.9 221 4-236 243-472 (652)
96 PRK08974 long-chain-fatty-acid 100.0 8.9E-30 1.9E-34 215.3 22.6 212 21-239 203-415 (560)
97 PRK07867 acyl-CoA synthetase; 100.0 1.1E-29 2.4E-34 213.1 22.1 205 19-239 147-364 (529)
98 PRK13388 acyl-CoA synthetase; 100.0 1E-29 2.2E-34 214.0 21.6 205 20-239 146-363 (540)
99 PRK06814 acylglycerophosphoeth 100.0 1.2E-29 2.6E-34 229.9 22.1 204 20-240 789-993 (1140)
100 PRK13390 acyl-CoA synthetase; 100.0 5.1E-30 1.1E-34 214.1 17.3 207 25-239 149-359 (501)
101 COG1021 EntE Peptide arylation 100.0 5.9E-31 1.3E-35 201.1 10.3 215 16-240 181-397 (542)
102 PRK08276 long-chain-fatty-acid 100.0 5E-29 1.1E-33 208.2 20.4 210 22-239 138-351 (502)
103 PRK07768 long-chain-fatty-acid 100.0 2.7E-29 5.9E-34 211.7 18.9 216 19-239 147-397 (545)
104 TIGR02155 PA_CoA_ligase phenyl 100.0 1.3E-29 2.8E-34 207.1 16.3 206 20-237 71-282 (422)
105 PRK09192 acyl-CoA synthetase; 100.0 3E-29 6.5E-34 212.8 18.5 218 19-240 171-423 (579)
106 PRK08279 long-chain-acyl-CoA s 100.0 1.1E-28 2.5E-33 210.1 20.7 207 19-239 194-416 (600)
107 PRK07445 O-succinylbenzoic aci 100.0 2.6E-29 5.7E-34 206.8 16.1 196 21-239 117-312 (452)
108 TIGR03335 F390_ftsA coenzyme F 100.0 2.9E-29 6.2E-34 205.6 15.8 205 18-236 80-286 (445)
109 PLN02479 acetate-CoA ligase 100.0 2.4E-28 5.3E-33 206.8 21.2 211 22-239 193-413 (567)
110 PLN03102 acyl-activating enzym 100.0 3.2E-28 7E-33 206.3 21.5 211 21-240 183-404 (579)
111 PRK08308 acyl-CoA synthetase; 100.0 3.6E-28 7.7E-33 198.4 20.2 193 20-236 97-289 (414)
112 PRK13391 acyl-CoA synthetase; 100.0 4.4E-28 9.4E-33 202.9 19.8 202 23-236 153-361 (511)
113 KOG1175 Acyl-CoA synthetase [L 100.0 1.5E-28 3.2E-33 201.9 16.3 227 4-237 219-450 (626)
114 TIGR01923 menE O-succinylbenzo 100.0 8.2E-28 1.8E-32 197.5 20.2 197 20-239 107-303 (436)
115 PRK05850 acyl-CoA synthetase; 100.0 3.7E-28 8E-33 206.2 18.0 219 20-240 156-409 (578)
116 PRK08162 acyl-CoA synthetase; 100.0 4.5E-27 9.8E-32 198.3 22.4 211 22-239 180-399 (545)
117 PRK07868 acyl-CoA synthetase; 100.0 3.8E-27 8.3E-32 209.4 19.7 203 22-238 604-819 (994)
118 PRK07798 acyl-CoA synthetase; 100.0 2.8E-26 6.1E-31 192.9 22.1 222 4-235 144-384 (533)
119 PRK09029 O-succinylbenzoic aci 99.9 4.6E-26 9.9E-31 188.3 19.0 186 19-239 130-315 (458)
120 PRK07824 O-succinylbenzoic aci 99.9 1.3E-25 2.8E-30 180.0 19.3 183 20-239 31-218 (358)
121 COG1541 PaaK Coenzyme F390 syn 99.9 2.9E-26 6.4E-31 180.8 15.0 207 18-235 84-293 (438)
122 TIGR02372 4_coum_CoA_lig 4-cou 99.9 7.8E-25 1.7E-29 175.8 16.3 169 24-214 95-265 (386)
123 KOG1179 Very long-chain acyl-C 99.9 1E-24 2.2E-29 173.7 15.7 201 19-233 237-453 (649)
124 COG1020 EntF Non-ribosomal pep 99.9 8.8E-23 1.9E-27 175.4 18.6 211 21-240 363-579 (642)
125 PTZ00297 pantothenate kinase; 99.9 1.2E-21 2.6E-26 176.4 15.6 209 3-236 575-833 (1452)
126 TIGR02304 aden_form_hyp probab 99.7 8.6E-16 1.9E-20 124.3 13.3 153 26-188 101-255 (430)
127 PF04443 LuxE: Acyl-protein sy 99.5 9.5E-13 2.1E-17 104.4 15.1 205 20-237 85-312 (365)
128 TIGR03089 conserved hypothetic 99.4 8.6E-13 1.9E-17 98.8 9.8 98 4-119 129-227 (227)
129 KOG3628 Predicted AMP-binding 99.3 2.7E-10 5.9E-15 98.2 15.5 216 19-239 938-1191(1363)
130 KOG1178 Non-ribosomal peptide 98.8 4.6E-08 1E-12 86.1 11.2 164 20-188 192-372 (1032)
131 KOG3628 Predicted AMP-binding 98.3 3.4E-06 7.4E-11 73.8 9.1 212 26-239 252-541 (1363)
132 PLN02247 indole-3-acetic acid- 97.3 0.021 4.5E-07 48.9 15.4 42 143-184 293-335 (606)
133 PF03321 GH3: GH3 auxin-respon 97.0 0.0012 2.7E-08 55.8 5.1 32 20-51 76-108 (528)
134 PLN02620 indole-3-acetic acid- 96.6 0.076 1.7E-06 45.5 12.8 31 21-51 98-129 (612)
135 PF00501 AMP-binding: AMP-bind 92.7 0.67 1.5E-05 38.0 7.7 90 23-123 9-99 (417)
136 PLN03052 acetate--CoA ligase; 91.6 2.1 4.5E-05 38.4 9.8 101 22-126 188-289 (728)
137 PLN02654 acetate-CoA ligase 91.2 2.2 4.7E-05 37.8 9.5 82 42-126 119-201 (666)
138 PTZ00237 acetyl-CoA synthetase 91.1 2.2 4.7E-05 37.6 9.4 81 42-125 91-172 (647)
139 PLN02736 long-chain acyl-CoA s 91.1 3.1 6.7E-05 36.7 10.4 89 42-133 77-166 (651)
140 PRK06839 acyl-CoA synthetase; 91.0 3.1 6.7E-05 35.0 10.0 88 42-131 26-114 (496)
141 PRK09274 peptide synthase; Pro 90.8 2 4.4E-05 36.8 8.9 100 23-125 20-121 (552)
142 TIGR02188 Ac_CoA_lig_AcsA acet 90.6 2.5 5.5E-05 37.0 9.3 99 22-126 70-169 (625)
143 PLN02249 indole-3-acetic acid- 90.6 0.16 3.4E-06 43.9 1.9 30 21-50 97-127 (597)
144 PRK00174 acetyl-CoA synthetase 89.4 3.7 7.9E-05 36.1 9.4 98 22-125 80-178 (637)
145 TIGR02370 pyl_corrinoid methyl 89.3 4.5 9.8E-05 29.7 8.4 91 69-161 85-183 (197)
146 PRK07788 acyl-CoA synthetase; 89.2 2.5 5.4E-05 36.3 8.1 86 43-131 74-160 (549)
147 PRK07529 AMP-binding domain pr 89.2 2.9 6.4E-05 36.7 8.6 98 22-124 38-136 (632)
148 TIGR01217 ac_ac_CoA_syn acetoa 89.1 3.8 8.2E-05 36.2 9.3 81 42-125 113-194 (652)
149 PRK08316 acyl-CoA synthetase; 89.0 3.9 8.6E-05 34.6 9.1 88 42-132 35-123 (523)
150 PLN02574 4-coumarate--CoA liga 88.9 4.1 8.9E-05 35.1 9.3 87 43-131 66-153 (560)
151 PRK03584 acetoacetyl-CoA synth 88.9 4.3 9.4E-05 35.8 9.5 98 22-126 97-195 (655)
152 COG0365 Acs Acyl-coenzyme A sy 88.6 3 6.4E-05 35.7 7.9 87 42-131 39-126 (528)
153 PRK06187 long-chain-fatty-acid 88.6 4.7 0.0001 34.1 9.3 85 44-131 32-117 (521)
154 PLN03102 acyl-activating enzym 88.5 2.5 5.5E-05 36.6 7.7 83 43-128 39-122 (579)
155 PTZ00342 acyl-CoA synthetase; 87.8 2.6 5.7E-05 37.8 7.5 103 42-150 90-206 (746)
156 PLN02614 long-chain acyl-CoA s 87.8 3.5 7.6E-05 36.5 8.3 88 43-133 79-167 (666)
157 PLN02861 long-chain-fatty-acid 87.8 4.1 8.8E-05 36.1 8.6 88 42-132 76-164 (660)
158 PRK07656 long-chain-fatty-acid 87.7 5.3 0.00011 33.8 9.1 84 43-129 30-114 (513)
159 PRK08008 caiC putative crotono 87.6 6 0.00013 33.6 9.4 84 43-129 37-121 (517)
160 cd02070 corrinoid_protein_B12- 87.6 6.6 0.00014 28.9 8.4 89 69-159 83-179 (201)
161 PLN02387 long-chain-fatty-acid 87.5 3.4 7.3E-05 36.8 8.0 89 42-133 105-194 (696)
162 TIGR01733 AA-adenyl-dom amino 87.5 2.2 4.8E-05 34.8 6.5 66 64-131 20-86 (408)
163 PRK13295 cyclohexanecarboxylat 87.4 4.9 0.00011 34.5 8.8 98 22-125 37-135 (547)
164 PRK05677 long-chain-fatty-acid 87.2 3.4 7.4E-05 35.6 7.7 85 43-129 49-134 (562)
165 KOG1176 Acyl-CoA synthetase [L 87.2 3.2 6.9E-05 35.6 7.3 93 41-135 43-137 (537)
166 PLN02246 4-coumarate--CoA liga 87.2 5.8 0.00013 33.9 9.1 85 43-130 50-135 (537)
167 TIGR03098 ligase_PEP_1 acyl-Co 87.1 3.3 7.2E-05 35.0 7.6 86 43-131 25-111 (515)
168 PRK08314 long-chain-fatty-acid 86.7 3.5 7.5E-05 35.3 7.5 88 43-132 35-123 (546)
169 cd02069 methionine_synthase_B1 86.7 6.8 0.00015 29.2 8.0 92 68-163 88-187 (213)
170 PRK10524 prpE propionyl-CoA sy 86.6 6.5 0.00014 34.4 9.2 98 22-125 66-164 (629)
171 PLN02330 4-coumarate--CoA liga 86.5 5 0.00011 34.4 8.4 84 43-129 55-139 (546)
172 PRK02261 methylaspartate mutas 86.4 8.5 0.00019 26.4 8.6 94 70-166 5-111 (137)
173 TIGR02316 propion_prpE propion 86.3 3.2 7E-05 36.4 7.2 98 22-125 65-163 (628)
174 PRK13388 acyl-CoA synthetase; 86.2 6.9 0.00015 33.6 9.1 85 43-130 26-112 (540)
175 KOG1177 Long chain fatty acid 86.2 2.9 6.2E-05 35.0 6.2 107 43-152 77-198 (596)
176 PRK05857 acyl-CoA synthetase; 86.1 5.4 0.00012 34.2 8.3 83 42-127 40-123 (540)
177 PRK07798 acyl-CoA synthetase; 86.0 8.3 0.00018 32.7 9.4 88 42-132 27-115 (533)
178 PRK06087 short chain acyl-CoA 85.5 5.9 0.00013 34.0 8.3 79 43-124 49-128 (547)
179 PRK06155 crotonobetaine/carnit 85.5 5.2 0.00011 34.3 8.0 88 43-133 46-134 (542)
180 PRK05605 long-chain-fatty-acid 85.5 4.5 9.7E-05 34.9 7.6 86 43-131 57-143 (573)
181 PRK06334 long chain fatty acid 85.4 11 0.00023 32.5 9.8 82 44-131 46-128 (539)
182 PRK08751 putative long-chain f 85.3 4 8.7E-05 35.1 7.2 85 43-129 50-135 (560)
183 PRK07514 malonyl-CoA synthase; 85.2 5.6 0.00012 33.6 8.0 86 42-130 27-113 (504)
184 PRK05620 long-chain-fatty-acid 85.2 9.3 0.0002 33.0 9.4 88 42-131 37-125 (576)
185 PRK13383 acyl-CoA synthetase; 85.1 5.7 0.00012 33.8 8.0 87 43-132 60-147 (516)
186 PRK04319 acetyl-CoA synthetase 85.0 3.2 6.9E-05 35.9 6.5 86 42-130 72-158 (570)
187 PRK08279 long-chain-acyl-CoA s 85.0 8.8 0.00019 33.4 9.2 86 43-131 62-148 (600)
188 PRK05850 acyl-CoA synthetase; 84.8 11 0.00025 32.5 9.8 86 42-131 34-123 (578)
189 PRK09088 acyl-CoA synthetase; 84.7 8.6 0.00019 32.3 8.8 80 43-125 22-102 (488)
190 PRK13391 acyl-CoA synthetase; 84.3 11 0.00024 32.0 9.3 98 22-129 10-108 (511)
191 PRK08315 AMP-binding domain pr 84.2 7.4 0.00016 33.4 8.4 81 43-126 43-124 (559)
192 PRK07059 Long-chain-fatty-acid 83.3 6.3 0.00014 33.9 7.6 85 42-129 47-132 (557)
193 PLN02860 o-succinylbenzoate-Co 83.1 4.9 0.00011 34.7 6.8 81 43-126 32-113 (563)
194 PRK08162 acyl-CoA synthetase; 83.0 6.2 0.00013 33.8 7.4 86 43-131 43-129 (545)
195 COG1167 ARO8 Transcriptional r 82.4 6.7 0.00015 33.0 7.1 58 66-128 176-237 (459)
196 PRK08276 long-chain-fatty-acid 82.2 9.9 0.00022 32.1 8.3 86 43-131 11-97 (502)
197 PRK12492 long-chain-fatty-acid 82.1 6.6 0.00014 33.8 7.3 84 42-127 48-132 (562)
198 PRK12583 acyl-CoA synthetase; 81.9 12 0.00026 32.1 8.7 81 43-126 45-126 (558)
199 PRK13390 acyl-CoA synthetase; 81.8 18 0.00039 30.6 9.7 94 22-125 10-104 (501)
200 PRK07867 acyl-CoA synthetase; 81.8 8.5 0.00018 33.0 7.7 85 43-129 28-113 (529)
201 PLN02430 long-chain-fatty-acid 81.5 9.8 0.00021 33.7 8.2 87 43-132 76-163 (660)
202 COG0318 CaiC Acyl-CoA syntheta 81.1 16 0.00034 31.5 9.1 81 43-126 38-119 (534)
203 PRK06178 acyl-CoA synthetase; 80.7 9.2 0.0002 33.0 7.6 87 43-132 58-145 (567)
204 PRK03640 O-succinylbenzoic aci 80.6 23 0.00049 29.7 9.8 83 43-128 27-110 (483)
205 PRK12406 long-chain-fatty-acid 80.4 9.4 0.0002 32.4 7.5 87 43-132 11-98 (509)
206 TIGR03443 alpha_am_amid L-amin 80.2 11 0.00024 36.6 8.6 100 22-124 249-349 (1389)
207 PRK06018 putative acyl-CoA syn 80.2 7.4 0.00016 33.4 6.8 85 42-129 38-123 (542)
208 TIGR01501 MthylAspMutase methy 80.0 17 0.00036 24.9 7.1 94 79-179 13-118 (134)
209 PRK07470 acyl-CoA synthetase; 79.9 11 0.00024 32.1 7.8 83 43-128 32-115 (528)
210 PRK07769 long-chain-fatty-acid 79.3 32 0.0007 30.2 10.6 84 42-129 54-141 (631)
211 PRK07008 long-chain-fatty-acid 79.2 10 0.00022 32.5 7.4 84 43-129 39-123 (539)
212 PRK08974 long-chain-fatty-acid 79.2 8.4 0.00018 33.2 6.9 84 43-128 48-132 (560)
213 PLN02479 acetate-CoA ligase 78.8 14 0.0003 32.0 8.1 83 43-128 45-128 (567)
214 TIGR03208 cyc_hxne_CoA_lg cycl 78.7 18 0.00038 31.0 8.7 81 42-125 52-133 (538)
215 TIGR02262 benz_CoA_lig benzoat 78.7 15 0.00032 31.2 8.2 84 43-129 30-114 (508)
216 PTZ00216 acyl-CoA synthetase; 78.4 14 0.00031 32.9 8.3 89 41-132 119-208 (700)
217 PRK12582 acyl-CoA synthetase; 78.1 8.4 0.00018 33.8 6.6 81 42-125 79-165 (624)
218 PRK13382 acyl-CoA synthetase; 77.9 16 0.00034 31.4 8.1 83 43-128 68-151 (537)
219 PRK06164 acyl-CoA synthetase; 77.8 7.7 0.00017 33.2 6.2 81 43-126 35-116 (540)
220 PTZ00297 pantothenate kinase; 77.8 14 0.0003 36.0 8.2 100 43-152 457-556 (1452)
221 PRK06188 acyl-CoA synthetase; 77.2 14 0.00031 31.4 7.7 82 42-126 36-118 (524)
222 PRK12476 putative fatty-acid-- 76.8 16 0.00034 32.0 7.9 85 42-130 67-155 (612)
223 cd02071 MM_CoA_mut_B12_BD meth 76.2 15 0.00032 24.6 6.1 84 79-166 11-101 (122)
224 PRK05852 acyl-CoA synthetase; 76.1 12 0.00026 32.0 6.9 78 43-123 43-121 (534)
225 PRK08180 feruloyl-CoA synthase 75.2 11 0.00025 32.9 6.7 81 42-125 68-154 (614)
226 PRK08633 2-acyl-glycerophospho 75.0 27 0.00058 33.1 9.5 99 22-132 628-727 (1146)
227 PRK06060 acyl-CoA synthetase; 73.9 18 0.00038 32.3 7.6 82 43-127 30-112 (705)
228 PRK07786 long-chain-fatty-acid 73.8 19 0.00041 30.9 7.6 83 43-128 42-125 (542)
229 PRK06710 long-chain-fatty-acid 73.7 13 0.00028 32.0 6.6 83 43-128 49-132 (563)
230 TIGR03089 conserved hypothetic 73.4 17 0.00036 27.4 6.4 76 22-102 9-84 (227)
231 TIGR01923 menE O-succinylbenzo 73.0 17 0.00036 30.0 6.9 62 63-126 18-80 (436)
232 PRK04813 D-alanine--poly(phosp 72.0 15 0.00032 30.9 6.5 80 43-125 27-107 (503)
233 PRK09029 O-succinylbenzoic aci 70.9 21 0.00045 29.8 7.0 80 43-125 28-108 (458)
234 TIGR03205 pimA dicarboxylate-- 70.6 20 0.00043 30.7 7.0 80 43-125 46-126 (541)
235 TIGR01734 D-ala-DACP-lig D-ala 70.2 19 0.00041 30.4 6.8 81 43-126 25-106 (502)
236 PRK09192 acyl-CoA synthetase; 69.1 33 0.00072 29.7 8.1 87 42-131 48-142 (579)
237 TIGR02275 DHB_AMP_lig 2,3-dihy 68.2 21 0.00045 30.5 6.6 80 43-125 48-128 (527)
238 KOG1175 Acyl-CoA synthetase [L 67.2 49 0.0011 29.2 8.4 97 23-125 79-176 (626)
239 PRK07445 O-succinylbenzoic aci 65.8 28 0.0006 29.2 6.8 81 42-125 18-100 (452)
240 PRK08043 bifunctional acyl-[ac 65.5 25 0.00055 31.5 6.8 83 43-129 231-314 (718)
241 PF06543 Lac_bphage_repr: Lact 64.9 6.1 0.00013 21.3 1.7 22 146-167 22-43 (49)
242 PRK07868 acyl-CoA synthetase; 63.9 38 0.00082 31.9 7.8 84 43-131 472-555 (994)
243 PRK07787 acyl-CoA synthetase; 61.7 59 0.0013 27.3 8.0 75 43-125 25-100 (471)
244 PF03808 Glyco_tran_WecB: Glyc 59.1 9 0.0002 27.4 2.4 71 97-173 7-78 (172)
245 PRK10252 entF enterobactin syn 59.0 35 0.00075 33.0 6.9 86 43-131 483-569 (1296)
246 PRK06145 acyl-CoA synthetase; 59.0 46 0.001 28.0 7.0 82 43-127 27-109 (497)
247 PF09664 DUF2399: Protein of u 57.8 63 0.0014 22.7 9.7 75 92-173 63-140 (152)
248 PF00455 DeoRC: DeoR C termina 57.3 43 0.00093 23.6 5.5 82 91-180 16-105 (161)
249 COG1022 FAA1 Long-chain acyl-C 57.3 86 0.0019 27.7 8.2 93 39-134 41-134 (613)
250 KOG1180 Acyl-CoA synthetase [L 56.2 74 0.0016 27.7 7.3 95 63-163 108-207 (678)
251 KOG0025 Zn2+-binding dehydroge 55.9 67 0.0014 25.4 6.5 98 63-165 155-255 (354)
252 PF05748 Rubella_E1: Rubella m 55.7 52 0.0011 25.3 5.9 79 154-234 213-292 (496)
253 COG1021 EntE Peptide arylation 55.0 63 0.0014 26.9 6.5 102 44-155 54-164 (542)
254 PRK08308 acyl-CoA synthetase; 54.9 71 0.0015 26.3 7.3 79 43-125 8-87 (414)
255 PRK06814 acylglycerophosphoeth 52.7 80 0.0017 30.2 8.0 82 43-128 658-740 (1140)
256 COG5012 Predicted cobalamin bi 51.3 68 0.0015 24.1 5.7 83 79-163 116-205 (227)
257 PRK10411 DNA-binding transcrip 50.7 52 0.0011 25.1 5.4 81 93-181 92-179 (240)
258 PRK05851 long-chain-fatty-acid 49.3 1.5E+02 0.0032 25.4 8.6 98 23-130 16-121 (525)
259 PRK07638 acyl-CoA synthetase; 48.2 83 0.0018 26.5 6.8 79 43-125 26-105 (487)
260 TIGR02082 metH 5-methyltetrahy 44.1 1.9E+02 0.0042 28.0 8.8 91 68-162 732-830 (1178)
261 KOG1256 Long-chain acyl-CoA sy 43.4 2.5E+02 0.0054 25.3 9.4 123 37-165 102-226 (691)
262 TIGR00640 acid_CoA_mut_C methy 43.0 1.1E+02 0.0023 20.9 7.2 84 79-166 14-104 (132)
263 PRK07768 long-chain-fatty-acid 42.9 99 0.0021 26.5 6.6 82 42-126 28-117 (545)
264 PF11974 MG1: Alpha-2-macroglo 42.0 20 0.00044 22.9 1.7 33 202-234 23-58 (97)
265 PRK05835 fructose-bisphosphate 41.9 39 0.00084 26.9 3.6 74 104-179 155-237 (307)
266 PRK05718 keto-hydroxyglutarate 39.9 1.6E+02 0.0034 22.0 7.5 85 87-179 79-165 (212)
267 PRK09257 aromatic amino acid a 38.1 2.2E+02 0.0048 23.3 7.7 14 67-80 118-131 (396)
268 PRK09490 metH B12-dependent me 37.7 2.4E+02 0.0052 27.5 8.4 86 69-158 752-845 (1229)
269 PRK10906 DNA-binding transcrip 37.3 1.5E+02 0.0034 22.7 6.2 81 92-180 89-177 (252)
270 PF07538 ChW: Clostridial hydr 37.1 21 0.00046 18.0 1.0 12 32-43 16-27 (36)
271 PRK10946 entE enterobactin syn 36.6 1.3E+02 0.0029 25.7 6.4 79 43-124 48-127 (536)
272 PRK13509 transcriptional repre 35.6 55 0.0012 25.1 3.5 53 93-153 92-144 (251)
273 COG1205 Distinct helicase fami 34.7 2.6E+02 0.0055 26.1 8.0 55 96-150 146-201 (851)
274 PF07210 DUF1416: Protein of u 34.1 50 0.0011 20.4 2.4 19 202-221 16-34 (85)
275 COG1922 WecG Teichoic acid bio 33.1 2.3E+02 0.005 21.9 7.0 82 87-173 56-138 (253)
276 cd02067 B12-binding B12 bindin 32.7 1.4E+02 0.0031 19.4 6.6 47 79-125 11-58 (119)
277 PRK10681 DNA-binding transcrip 32.4 2E+02 0.0043 22.1 6.1 80 92-179 90-177 (252)
278 KOG1257 NADP+-dependent malic 32.0 68 0.0015 27.5 3.6 54 106-159 378-457 (582)
279 smart00728 ChW Clostridial hyd 31.3 26 0.00056 18.9 0.8 12 32-43 17-28 (46)
280 TIGR00696 wecB_tagA_cpsF bacte 30.6 36 0.00079 24.5 1.7 17 118-134 51-67 (177)
281 PF00818 Ice_nucleation: Ice n 30.0 26 0.00057 14.1 0.5 8 175-182 1-8 (16)
282 PRK09196 fructose-1,6-bisphosp 30.0 71 0.0015 25.9 3.4 75 104-180 173-260 (347)
283 PF14779 BBS1: Ciliary BBSome 29.1 2.8E+02 0.006 21.6 6.8 129 24-172 29-173 (257)
284 PF02310 B12-binding: B12 bind 28.2 1.5E+02 0.0032 19.3 4.3 45 79-124 12-58 (121)
285 PF01041 DegT_DnrJ_EryC1: DegT 28.1 3.3E+02 0.0071 22.1 7.3 65 64-133 60-134 (363)
286 PRK13399 fructose-1,6-bisphosp 27.7 87 0.0019 25.4 3.5 76 104-181 173-261 (347)
287 COG1153 FwdD Formylmethanofura 27.0 64 0.0014 21.5 2.2 27 18-44 76-104 (128)
288 PF07610 DUF1573: Protein of u 26.6 47 0.001 17.6 1.4 15 220-234 30-44 (45)
289 PRK09802 DNA-binding transcrip 26.6 2.1E+02 0.0045 22.3 5.4 80 94-181 106-193 (269)
290 cd02072 Glm_B12_BD B12 binding 25.3 2.3E+02 0.0049 19.3 7.7 85 79-166 11-107 (128)
291 PF08438 MMR_HSR1_C: GTPase of 25.1 1E+02 0.0023 20.2 2.9 72 107-180 12-86 (109)
292 cd04910 ACT_AK-Ectoine_1 ACT d 25.0 1.1E+02 0.0025 18.2 2.9 51 107-172 19-69 (71)
293 PF11040 DGF-1_C: Dispersed ge 21.1 68 0.0015 19.3 1.3 17 22-38 35-51 (87)
294 PRK10434 srlR DNA-bindng trans 20.8 3.4E+02 0.0075 20.8 5.6 81 93-180 90-178 (256)
295 PF13213 DUF4021: Protein of u 20.7 43 0.00092 17.8 0.4 8 175-182 29-36 (46)
296 KOG1553 Predicted alpha/beta h 20.4 2.9E+02 0.0064 22.7 5.0 62 33-102 280-341 (517)
297 cd06533 Glyco_transf_WecG_TagA 20.3 90 0.002 22.3 2.2 16 117-132 48-63 (171)
298 PF10102 DUF2341: Domain of un 20.2 2E+02 0.0043 18.1 3.4 28 210-238 4-39 (89)
299 PF13953 PapC_C: PapC C-termin 20.1 60 0.0013 19.0 1.0 12 225-236 28-39 (68)
No 1
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=4e-39 Score=262.47 Aligned_cols=222 Identities=29% Similarity=0.403 Sum_probs=192.0
Q ss_pred cchhhHhhcCCCCCCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhh
Q 039504 3 LHFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIY 82 (240)
Q Consensus 3 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~ 82 (240)
+.|+++.+.++.......++++|+++++|||||||+||++.++|..+.......... .+.+.++|++++..++.|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~---~~~~~~~Dv~w~~ad~GW~~ 226 (528)
T COG0365 150 LWYDEAVEKASEKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKF---HGDLLPGDRFWNSSDPGWIY 226 (528)
T ss_pred ccHHHHhhccCCCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHH---hhCCCCCCEEEeCCCchhhh
Confidence 457777777777777777999999999999999999999999999877766554432 34567999999999999999
Q ss_pred hhHHHHHHHhhcCceEEEccC--C-CHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHH
Q 039504 83 SLNSVLLCSLRAGAGVLLMQK--F-EIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKEL 159 (240)
Q Consensus 83 g~~~~~~~~l~~G~~~v~~~~--~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~ 159 (240)
|.+..++.++..|++.++... + ++..++++++++++|++++.|+.++.|.+.....+.++++||.+.+.|||++++.
T Consensus 227 g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~ 306 (528)
T COG0365 227 GLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEA 306 (528)
T ss_pred CchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHH
Confidence 999889999999999988753 3 4999999999999999999999999999987766678999999999999999999
Q ss_pred HHHHHHhCCCCcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCC
Q 039504 160 EDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGP 236 (240)
Q Consensus 160 ~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 236 (240)
++++.+.+ ++.|.+.||+||++.+.... .. ...+++.|+|+|++++.|+|.+ +++++.|+ |+|+|+.|
T Consensus 307 ~~w~~~~~-g~~i~d~~gqTEtg~~~~~~-----~~-~~~~g~~g~p~pG~~~~vvdd~-g~~~~~~~-G~Lvi~~~ 374 (528)
T COG0365 307 FEWFYSAL-GVWILDIYGQTETGMGFIAG-----RP-PVKNGSSGLPLPGYAVRRVDDE-GNPVPPGV-GELVVRLP 374 (528)
T ss_pred HHHHHHHh-CCCEeccccccccCccccCC-----CC-CcCCCCCCCCCCCceeEEECCC-CCcCCCCc-eEEEEeCC
Confidence 99999999 79999999999999544432 11 3345566999999999999955 99999999 99999987
No 2
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-38 Score=260.03 Aligned_cols=214 Identities=47% Similarity=0.755 Sum_probs=189.6
Q ss_pred CCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 18 EVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
......+|++.++|||||||.||||.+||+++......... .......|+.++.+|++|.+|+...+.+.+..|.+
T Consensus 178 ~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~----~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ 253 (537)
T KOG1176|consen 178 IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKI----GWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTT 253 (537)
T ss_pred cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhh----cccCCCCceEEEechHHHHhHHHHHHHHHHhCCce
Confidence 55667799999999999999999999999998887665444 23456689999999999999999777778888999
Q ss_pred EEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccc
Q 039504 98 VLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYG 177 (240)
Q Consensus 98 ~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 177 (240)
++..+.++++.+++.+++|++|++.++|.++..|++.+.....+++++|.+.+||+++++++.+++++.++...+.+.||
T Consensus 254 ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YG 333 (537)
T KOG1176|consen 254 IICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYG 333 (537)
T ss_pred EEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeec
Confidence 99999999999999999999999999999999999998777789999999999999999999999999997799999999
Q ss_pred ccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 178 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 178 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
+||+++..+.+... +. ..++++|++++++.+.|.+ ++|+.+++++.||||++|+.+++
T Consensus 334 mTE~~~~~~~~~~~---~e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imk 391 (537)
T KOG1176|consen 334 MTEAGGLITSNDWG---PE-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMK 391 (537)
T ss_pred cccccCceeecCCC---cc-CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccch
Confidence 99999776665221 11 4789999999988888888 99999999999999999999874
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.3e-37 Score=260.71 Aligned_cols=212 Identities=43% Similarity=0.687 Sum_probs=185.8
Q ss_pred CCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCcc--ccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 21 IEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLY--LTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~--~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
++++|+++++|||||||.||+|.+||+++..+...... .++ +.+.|++++.+|++|.+|+...++..++.|+++
T Consensus 168 ~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~----~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~ 243 (534)
T COG0318 168 VDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAA----ALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTL 243 (534)
T ss_pred CCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHH----HhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEE
Confidence 77999999999999999999999999999988776665 334 789999999999999999997777789999999
Q ss_pred EEcc--CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccc-hhhhhccCCCCCHHHHHHHHHhCCCCccccc
Q 039504 99 LLMQ--KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSS-IRVVLSGAAPLGKELEDALRSRVPQAILGQG 175 (240)
Q Consensus 99 v~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~-lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 175 (240)
++.+ .++++.++..+.+++++++.++|.++..++.........+.+ +|.++.||+++++++.+++++.|+..++.+.
T Consensus 244 v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~ 323 (534)
T COG0318 244 VLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEG 323 (534)
T ss_pred EeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEe
Confidence 9988 599999999999999999999999999999998877766665 9999999999999999999999965789999
Q ss_pred ccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 176 YGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 176 yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
||+||++..++.+.... . ....+.+|+|.|+++++|+|+++++++| |++|||+|+||+|++
T Consensus 324 YG~TE~~~~~~~~~~~~-~--~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~ 384 (534)
T COG0318 324 YGLTETSPVVTINPPDD-L--LAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMK 384 (534)
T ss_pred ecccccCceeecCCCch-h--hhcCCcccccCCCcEEEEEeCCCCccCC-CCceEEEEECchhhh
Confidence 99999997766653221 0 2355677999999999999988776777 999999999999874
No 4
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.1e-37 Score=261.88 Aligned_cols=213 Identities=27% Similarity=0.451 Sum_probs=184.1
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++|+++++|||||||.||+|.++|+++......... .+++.++|+++..+|++|.+++...++.++..|++++
T Consensus 179 ~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv 254 (539)
T PRK06334 179 DKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLK----FFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVV 254 (539)
T ss_pred CCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH----hcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEE
Confidence 456789999999999999999999999999887666554 3457889999999999999998766788899999988
Q ss_pred Ecc-CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 100 LMQ-KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 100 ~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
+.. ++++..+++.|+++++|++.++|++++.|++........++++|.+++||+++++++.+++++.|+++.+++.||+
T Consensus 255 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~ 334 (539)
T PRK06334 255 FAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGT 334 (539)
T ss_pred EecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHCCCCeEEecccc
Confidence 875 5899999999999999999999999999988765555677899999999999999999999999988899999999
Q ss_pred cccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 179 TEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 179 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
||++.++.... ........++|+|+++++++|+|++++++++.|+.|||+|+|+.+++
T Consensus 335 TE~~~~~~~~~----~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~ 392 (539)
T PRK06334 335 TECSPVITINT----VNSPKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFS 392 (539)
T ss_pred cccCceEEecc----CCCCCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCcccc
Confidence 99986654331 11122346799999999999999778899999999999999998874
No 5
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.6e-36 Score=255.16 Aligned_cols=223 Identities=80% Similarity=1.323 Sum_probs=190.4
Q ss_pred CCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCc
Q 039504 17 PEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGA 96 (240)
Q Consensus 17 ~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 96 (240)
+.....++++++++|||||||.||++.++|+++..............+.+.++|+++..+|++|.+++...++.++..|+
T Consensus 172 ~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~ 251 (537)
T PLN02246 172 PEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGA 251 (537)
T ss_pred CCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCC
Confidence 34456788999999999999999999999999988776554433334567899999999999999998766788999999
Q ss_pred eEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccc
Q 039504 97 GVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGY 176 (240)
Q Consensus 97 ~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 176 (240)
++++.+++++..+++.++++++|++.++|+++..|.+........++++|.+++||+++++++.+.+++.|++..+++.|
T Consensus 252 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~Y 331 (537)
T PLN02246 252 AILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGY 331 (537)
T ss_pred EEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHHHcCCCeEeccc
Confidence 99999999999999999999999999999999999887665556678999999999999999999999999888899999
Q ss_pred cccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 177 GMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 177 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|+||++.++..+...........++++|+|.++++++|+|++++++++.|+.|||+|+|+.++
T Consensus 332 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~ 394 (537)
T PLN02246 332 GMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEICIRGPQIM 394 (537)
T ss_pred cccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEEEECCchh
Confidence 999998765443221112223345789999999999999988899999999999999999876
No 6
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=4.1e-36 Score=253.65 Aligned_cols=219 Identities=36% Similarity=0.550 Sum_probs=181.7
Q ss_pred CCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCcc-ccCCcEEEEecchHHhhhhHHHHHHHhhcCc
Q 039504 18 EVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLY-LTNGDVVLCVLPLFHIYSLNSVLLCSLRAGA 96 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 96 (240)
.....++++++++|||||||.||+|.++|+++......+......... ....++++..+|++|.+++...++.++..|+
T Consensus 192 ~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~ 271 (560)
T PLN02574 192 KPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGS 271 (560)
T ss_pred cCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCC
Confidence 344567899999999999999999999999998776654321111111 2356788899999999999866778888999
Q ss_pred eEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCC-CCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccc
Q 039504 97 GVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV-ADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQG 175 (240)
Q Consensus 97 ~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~-~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 175 (240)
++++.+.+++..+++.++++++|++.++|++++.|.+.... ....++++|.++++|+++++++++++.+.|++.++++.
T Consensus 272 ~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~ 351 (560)
T PLN02574 272 TIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQG 351 (560)
T ss_pred EEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHHHHHCCCCcEEec
Confidence 99999899999999999999999999999999999887543 34567899999999999999999999999988999999
Q ss_pred ccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 176 YGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 176 yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
||+||++.+..... .........++|++.|+++++|+|++++++++.|+.|||+|+|+.++
T Consensus 352 YG~tE~~~~~~~~~---~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~~~ 412 (560)
T PLN02574 352 YGMTESTAVGTRGF---NTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGELWIQGPGVM 412 (560)
T ss_pred ccccccCceeecCC---CccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCeEEEEECcchh
Confidence 99999986543221 11122345789999999999999988899999999999999999876
No 7
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=236.62 Aligned_cols=232 Identities=26% Similarity=0.413 Sum_probs=197.8
Q ss_pred CcchhhHhhcCCCCC------CCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEe
Q 039504 2 CLHFTVLSEADEDQI------PEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCV 75 (240)
Q Consensus 2 ~~~~~~l~~~~~~~~------~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~ 75 (240)
...++|++...+.+. ......|+|++.|.|||||||.||++.+||.+++++...... ..++...+++...
T Consensus 206 a~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~----r~g~~e~~~i~~~ 281 (596)
T KOG1177|consen 206 AFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGA----RAGYNEKHRICIP 281 (596)
T ss_pred ceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHH----HhCcCcceEEEec
Confidence 345667776554321 234567899999999999999999999999999998877665 4577888899999
Q ss_pred cchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCC
Q 039504 76 LPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAP 154 (240)
Q Consensus 76 ~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~ 154 (240)
.|++|.+|.....++++..|+++|++. .+++.+.+++|.++++|.++++|.++..|+.....++.+++++|-++.+|++
T Consensus 282 ~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~ 361 (596)
T KOG1177|consen 282 NPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAP 361 (596)
T ss_pred CchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCC
Confidence 999999998888999999999999975 5999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhCCCCcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEe
Q 039504 155 LGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIR 234 (240)
Q Consensus 155 ~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~ 234 (240)
+++++++.+.....--.+...||+||++...++.. ..++......++|+..++.+..|+| +.|..+|.|..|||++|
T Consensus 362 ~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~--~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~~Gel~iR 438 (596)
T KOG1177|consen 362 VSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSL--LGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGTKGELLIR 438 (596)
T ss_pred CCHHHHHHHHHhhCceeeEEEeeccccCcceeeec--CCCCHHHHHhhhhhccccccccccc-CCCCccccCCCceEEEE
Confidence 99999999999763233667899999997766541 2233344557999999999999999 77999999999999999
Q ss_pred CCCCCC
Q 039504 235 GPQIMK 240 (240)
Q Consensus 235 ~~~~~~ 240 (240)
|+++|+
T Consensus 439 GY~tMl 444 (596)
T KOG1177|consen 439 GYSTML 444 (596)
T ss_pred echhhe
Confidence 998763
No 8
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.4e-36 Score=251.38 Aligned_cols=207 Identities=25% Similarity=0.378 Sum_probs=178.6
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.+++.++++|||||||.||+|.++|.++......... .+.+.++|+++...|++|.+|+. .++.++..|+++++.
T Consensus 205 ~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~-~~~~~l~~G~~~v~~ 279 (549)
T PRK07788 205 PPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLS----RVPFRAGETTLLPAPMFHATGWA-HLTLAMALGSTVVLR 279 (549)
T ss_pred CCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHh----hCCCCcCCeEEEccchHHHHHHH-HHHHHHHhCCEEEEC
Confidence 4577899999999999999999999999887666554 44578899999999999999987 567789999999999
Q ss_pred cCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCC--CCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccc
Q 039504 102 QKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV--ADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 102 ~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 179 (240)
..+++..+++.++++++|++.++|++++.+.+.... ....++++|.+++||+++++++.+++++.| +.++++.||+|
T Consensus 280 ~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~T 358 (549)
T PRK07788 280 RRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAF-GPVLYNLYGST 358 (549)
T ss_pred CCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHh-CccceeccCcc
Confidence 889999999999999999999999999999987654 445678999999999999999999999998 67899999999
Q ss_pred ccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 180 EAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 180 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|++..+.... ......++++|+|.++++++|+| +++++++.|+.|||+|+|+.++
T Consensus 359 E~~~~~~~~~----~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~ 413 (549)
T PRK07788 359 EVAFATIATP----EDLAEAPGTVGRPPKGVTVKILD-ENGNEVPRGVVGRIFVGNGFPF 413 (549)
T ss_pred hhchhhccCh----hhhhhcCCCcccCCCCcEEEEEC-CCcCCCCCCCeEEEEEeCCCcc
Confidence 9875543321 11223457899999999999999 6689999999999999999875
No 9
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-35 Score=255.43 Aligned_cols=213 Identities=24% Similarity=0.304 Sum_probs=170.8
Q ss_pred CCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 18 EVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
....+|+|+++|+|||||||.||||.+||+++...+....... .....+.|++++++|++|++++. ..+.+++.|++
T Consensus 298 ~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~--~~~~~~~d~~ls~LPL~Hi~~~~-~~~~~l~~G~~ 374 (746)
T PTZ00342 298 IQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHS--IFKKYNPKTHLSYLPISHIYERV-IAYLSFMLGGT 374 (746)
T ss_pred CCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcc--cccCCCCCeEEEeCcHHHHHHHH-HHHHHHHcCCE
Confidence 3456789999999999999999999999999988876543311 11123558999999999999987 56778999999
Q ss_pred EEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCC-------C-CCC------------------------------
Q 039504 98 VLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNP-------M-VAD------------------------------ 139 (240)
Q Consensus 98 ~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~-------~-~~~------------------------------ 139 (240)
+++.+. ++..+++.|+++++|+++++|.+++.+.+.. . ..+
T Consensus 375 i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~ 453 (746)
T PTZ00342 375 INIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISS 453 (746)
T ss_pred EEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHH
Confidence 988765 8999999999999999999999999887521 0 000
Q ss_pred ----CCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccccccchhhccCCCCCCCCCCCCcccccc-CCceEEE
Q 039504 140 ----YDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVV-RNAELKV 214 (240)
Q Consensus 140 ----~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~v~i 214 (240)
....++|.+++||+++++++.++++..+ ++++++.||+||++..++... ......+++|+|+ |+++++|
T Consensus 454 kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~~gYGlTEt~~~~~~~~-----~~~~~~gsvG~p~~pg~e~ki 527 (746)
T PTZ00342 454 KIKDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYYQGYGLTETTGPIFVQH-----ADDNNTESIGGPISPNTKYKV 527 (746)
T ss_pred HHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEEEeeccCcccceeeecc-----CCCCCcccccCcCCCcEEEEE
Confidence 0014789999999999999999999988 789999999999976554331 1234568999998 9999999
Q ss_pred eeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 215 IDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 215 ~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
+|++++...+.++.|||+|+||.+|+
T Consensus 528 ~d~~~~~~~~~~~~GEl~vrGp~v~~ 553 (746)
T PTZ00342 528 RTWETYKATDTLPKGELLIKSDSIFS 553 (746)
T ss_pred ecccccccCCCCCceEEEEecCcccc
Confidence 99766666666678999999999874
No 10
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.5e-35 Score=245.51 Aligned_cols=211 Identities=34% Similarity=0.518 Sum_probs=184.8
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....++++++++|||||||.||+|.++|.++......... .+.+.++|++++.+|++|.+|+...++.++..|+++
T Consensus 185 ~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i 260 (546)
T PRK08314 185 HTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVL----WSNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATV 260 (546)
T ss_pred CCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----hhCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeE
Confidence 3456789999999999999999999999999888776554 345788999999999999999887788999999999
Q ss_pred EEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 99 LLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 99 v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
++.+.+++..+++.++++++|++.++|+++..+..........++++|.+++||+++++++.+++.+.| +.++++.||+
T Consensus 261 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~ 339 (546)
T PRK08314 261 VLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMPEAVAERLKELT-GLDYVEGYGL 339 (546)
T ss_pred EecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCCHHHHHHHHHHc-CCcEEecccc
Confidence 999999999999999999999999999999999876555556678899999999999999999999998 7899999999
Q ss_pred cccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 179 TEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 179 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
||++....... .......++|+|.++++++|+|++++++++.|+.|||+|+|++++
T Consensus 340 tE~~~~~~~~~-----~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~ 395 (546)
T PRK08314 340 TETMAQTHSNP-----PDRPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQVF 395 (546)
T ss_pred cccccceecCC-----CcCCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCchh
Confidence 99986554321 112345689999999999999988899999999999999999875
No 11
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=4e-35 Score=244.45 Aligned_cols=208 Identities=22% Similarity=0.229 Sum_probs=170.2
Q ss_pred CCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEE
Q 039504 21 IEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL 100 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 100 (240)
.+++|+++|+|||||||.||+|.++|.++......... .++++++|++++.+|++|..++. .++.++..|+++++
T Consensus 116 ~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~-~~~~~l~~G~t~v~ 190 (499)
T PLN03051 116 APVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWA----HMDIQPGDVVCWPTNLGWMMGPW-LLYSAFLNGATLAL 190 (499)
T ss_pred CCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHH----hcCCCCCCEEEEccCcceeeehH-HHHHHHHcCCEEEe
Confidence 35689999999999999999999999998765543333 33578899999999999998876 67888999999988
Q ss_pred ccC-CCHHHHHHHHHhccceeeeechHHHHHHHhCCC--CCCCCccchhhhhccCCCCCHHHHHHHHHhCC-CCcccccc
Q 039504 101 MQK-FEIGALLELIQRHRVSVAAVVPPLVLALAKNPM--VADYDLSSIRVVLSGAAPLGKELEDALRSRVP-QAILGQGY 176 (240)
Q Consensus 101 ~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~-~~~i~~~y 176 (240)
.+. +++..+++.|+++++|++.++|++++.|.+... ....+++++|.+++||+++++++.+++++.++ +.++++.|
T Consensus 191 ~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~Y 270 (499)
T PLN03051 191 YGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYC 270 (499)
T ss_pred cCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhheEEEecCCCCCHHHHHHHHHhccccceeEeee
Confidence 864 788999999999999999999999999887543 23456789999999999999999988877431 47899999
Q ss_pred cccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCC--CCceEEEeCCCC
Q 039504 177 GMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHN--QPGEICIRGPQI 238 (240)
Q Consensus 177 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g--~~Gel~v~~~~~ 238 (240)
|+||++..+.... .......+++|+|.++++++|+| +++++++.| ++|||+|+||.+
T Consensus 271 G~TE~~~~~~~~~----~~~~~~~~~~G~p~~~~~~~ivd-~~g~~~~~g~~~~Gel~v~g~~~ 329 (499)
T PLN03051 271 GGTELASGYISST----LLQPQAPGAFSTASLGTRFVLLN-DNGVPYPDDQPCVGEVALAPPML 329 (499)
T ss_pred ccccccceeeccc----ccCCCCCccccCCCCCceEEEEC-CCCCCCCCCCCcceEEEEecCcC
Confidence 9999864332211 11123457899999999999999 678999998 479999999976
No 12
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=4.8e-35 Score=251.06 Aligned_cols=214 Identities=22% Similarity=0.313 Sum_probs=177.3
Q ss_pred CCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHH-hhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCc
Q 039504 18 EVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVA-QQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGA 96 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~-~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 96 (240)
...++++|+++|+|||||||.||+|+++|.++..... .... .++++++|++++..|++|+.+....++.++..|+
T Consensus 269 ~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~ 344 (666)
T PLN02654 269 VEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKY----AFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGA 344 (666)
T ss_pred ceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHH----hcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCc
Confidence 3346789999999999999999999999998765432 2222 3467899999999999999998767889999999
Q ss_pred eEEEccC----CCHHHHHHHHHhccceeeeechHHHHHHHhCCCC--CCCCccchhhhhccCCCCCHHHHHHHHHhCCC-
Q 039504 97 GVLLMQK----FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV--ADYDLSSIRVVLSGAAPLGKELEDALRSRVPQ- 169 (240)
Q Consensus 97 ~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~- 169 (240)
++++.++ .++..++++|+++++|++.++|++++.|.+.... ...+++++|.++++|+++++++.+++.+.++.
T Consensus 345 tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~ 424 (666)
T PLN02654 345 TVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDS 424 (666)
T ss_pred eEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCCCCHHHHHHHHHHhCCC
Confidence 9998753 5899999999999999999999999999886532 33567899999999999999999999999843
Q ss_pred -CcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeC--CCCC
Q 039504 170 -AILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRG--PQIM 239 (240)
Q Consensus 170 -~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~--~~~~ 239 (240)
+.+.+.||+||+++...... .......++++|+|.|+++++|+| +++++++.++.|||+|++ |+++
T Consensus 425 ~~~i~~~yg~TE~g~~~~~~~---~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~~~~~~~Gel~v~~~~p~~~ 493 (666)
T PLN02654 425 RCPISDTWWQTETGGFMITPL---PGAWPQKPGSATFPFFGVQPVIVD-EKGKEIEGECSGYLCVKKSWPGAF 493 (666)
T ss_pred CCceeccccccccCCeeeccC---CCCCCCCCCccCCCCCCceEEEEC-CCCCCCCCCCceEEEEcCCCchhh
Confidence 68999999999986554321 111234567899999999999999 668999999999999998 5554
No 13
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-34 Score=245.44 Aligned_cols=226 Identities=25% Similarity=0.357 Sum_probs=185.1
Q ss_pred chhhHhhcCCCCCCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhh
Q 039504 4 HFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYS 83 (240)
Q Consensus 4 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g 83 (240)
+++++.+...+........++|+++++|||||||.||+|.++|.++......... .+.+.++|++++..|++|..|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~g 260 (570)
T PRK04319 185 DFNALMEQASDEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKY----VLDLHEDDVYWCTADPGWVTG 260 (570)
T ss_pred CHHHHHhhcCCcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHH----hcCCCCCceEEecCChHHhhC
Confidence 4555544444333344567789999999999999999999999999877665544 446788999999999999998
Q ss_pred hHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCC--CCCCccchhhhhccCCCCCHHHH
Q 039504 84 LNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV--ADYDLSSIRVVLSGAAPLGKELE 160 (240)
Q Consensus 84 ~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~lr~v~~~G~~~~~~~~ 160 (240)
....++.++..|+++++.. .+++..+++.++++++|++.++|++++.|.+.... ....++++|.++++|+++++++.
T Consensus 261 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~ 340 (570)
T PRK04319 261 TSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVV 340 (570)
T ss_pred chHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHH
Confidence 8767889999999988865 58999999999999999999999999999876432 23457789999999999999999
Q ss_pred HHHHHhCCCCcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeC--CCC
Q 039504 161 DALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRG--PQI 238 (240)
Q Consensus 161 ~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~--~~~ 238 (240)
+++++.+ +.++++.||+||++..+.... ......++++|+|.|+++++|+| +++++++.|+.|||+|+| |++
T Consensus 341 ~~~~~~~-g~~i~~~YG~tE~~~~~~~~~----~~~~~~~~~~G~p~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~ 414 (570)
T PRK04319 341 RWGMKVF-GLPIHDNWWMTETGGIMIANY----PAMDIKPGSMGKPLPGIEAAIVD-DQGNELPPNRMGNLAIKKGWPSM 414 (570)
T ss_pred HHHHHHh-CCCeEeceeecccCCEEEecC----CCCCCCCCcCcCCCCCCEEEEEC-CCCCCCCCCCceEEEEcCCCChH
Confidence 9999988 789999999999986543221 11234567899999999999999 568889999999999997 655
Q ss_pred C
Q 039504 239 M 239 (240)
Q Consensus 239 ~ 239 (240)
+
T Consensus 415 ~ 415 (570)
T PRK04319 415 M 415 (570)
T ss_pred H
Confidence 4
No 14
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-34 Score=241.58 Aligned_cols=228 Identities=32% Similarity=0.526 Sum_probs=192.6
Q ss_pred chhhHhhcCCCCCCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhh
Q 039504 4 HFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYS 83 (240)
Q Consensus 4 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g 83 (240)
+|+++..............++++++++|||||||.||+|.++|.++......... .+++.++|++++.+|++|.++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 221 (513)
T PRK07656 146 TFTDFLAAGDPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAE----YLGLTEGDRYLAANPFFHVFG 221 (513)
T ss_pred cHHHHHhcCCCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHH----hhCCCCCCeEEEccchHHHHH
Confidence 4455554433323444567889999999999999999999999999887766555 456789999999999999999
Q ss_pred hHHHHHHHhhcCceEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHH
Q 039504 84 LNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDAL 163 (240)
Q Consensus 84 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~ 163 (240)
+...++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+........++++|.++++|+++++++.+++
T Consensus 222 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~ 301 (513)
T PRK07656 222 YKAGVNAPLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERF 301 (513)
T ss_pred HHHHHHHHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHH
Confidence 88778999999999999888999999999999999999999999999999877766778899999999999999999999
Q ss_pred HHhCCCC-cccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 164 RSRVPQA-ILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 164 ~~~~~~~-~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
++.+ +. .+++.||+||++.+...+.... .......++|+|.++++++|+| +++++++.|+.|||+|+|+.++
T Consensus 302 ~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~--~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~ 374 (513)
T PRK07656 302 ESEL-GVDIVLTGYGLSEASGVTTFNRLDD--DRKTVAGTIGTAIAGVENKIVN-ELGEEVPVGEVGELLVRGPNVM 374 (513)
T ss_pred HHHc-CCCceEeEEccccCCCceeecCccc--cccccCCCccccCCCcEEEEEC-CCCCCCCCCCceEEEEEcchhh
Confidence 9999 55 8999999999987766543211 1112257899999999999999 6689999999999999998765
No 15
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.6e-34 Score=246.95 Aligned_cols=228 Identities=24% Similarity=0.339 Sum_probs=182.9
Q ss_pred hhhHhhcCCCCCCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhh
Q 039504 5 FTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSL 84 (240)
Q Consensus 5 ~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~ 84 (240)
++++.+...........+++|+++|+|||||||.||+|.++|.++.......... .+++.++|++++..|++|+.+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~g~ 293 (625)
T TIGR02188 217 WHDLMAKASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKY---VFDIKDGDIFWCTADVGWITGH 293 (625)
T ss_pred HHHHHhhcCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHh---ccCCCCCcEEEECCCchhhhcc
Confidence 4444444333334445678999999999999999999999999976554332221 3467889999999999999887
Q ss_pred HHHHHHHhhcCceEEEccC----CCHHHHHHHHHhccceeeeechHHHHHHHhCCCC--CCCCccchhhhhccCCCCCHH
Q 039504 85 NSVLLCSLRAGAGVLLMQK----FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV--ADYDLSSIRVVLSGAAPLGKE 158 (240)
Q Consensus 85 ~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~lr~v~~~G~~~~~~ 158 (240)
...++.++..|+++++.+. .++..+++.++++++|++.++|++++.|.+.... ....++++|.++++|++++++
T Consensus 294 ~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~ 373 (625)
T TIGR02188 294 SYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPE 373 (625)
T ss_pred HHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHH
Confidence 6568899999999998753 4899999999999999999999999999886543 234578999999999999999
Q ss_pred HHHHHHHhCC--CCcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCC-CCCCceEEEeC
Q 039504 159 LEDALRSRVP--QAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLP-HNQPGEICIRG 235 (240)
Q Consensus 159 ~~~~~~~~~~--~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~-~g~~Gel~v~~ 235 (240)
+.+++.+.++ ++++++.||+||++..+..... ......++++|+|.++++++|+| +++++++ .|+.|||+|++
T Consensus 374 ~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~---~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~g~~GeL~v~~ 449 (625)
T TIGR02188 374 AWMWYYKVVGKERCPIVDTWWQTETGGIMITPLP---GATPTKPGSATLPFFGIEPAVVD-EEGNPVEGPGEGGYLVIKQ 449 (625)
T ss_pred HHHHHHHHcCCCCCceEecccccccCCceeecCC---CCCCcCCCcccCCcCCceEEEEC-CCCCCCCCCCCeEEEEEcc
Confidence 9999999884 3789999999999866443211 11234567899999999999999 7799999 99999999999
Q ss_pred --CCCC
Q 039504 236 --PQIM 239 (240)
Q Consensus 236 --~~~~ 239 (240)
|+++
T Consensus 450 p~p~~~ 455 (625)
T TIGR02188 450 PWPGML 455 (625)
T ss_pred CCCccc
Confidence 4554
No 16
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=2.3e-34 Score=242.48 Aligned_cols=211 Identities=29% Similarity=0.430 Sum_probs=183.0
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++++++++|||||||.||+|.++|.++......... .+++.++|+++...|++|..++...++.++..|++++
T Consensus 193 ~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~ 268 (547)
T PRK13295 193 RPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAE----RLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAV 268 (547)
T ss_pred CCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHH----HhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEE
Confidence 346689999999999999999999999999887776554 4467889999999999999988767889999999999
Q ss_pred EccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccc
Q 039504 100 LMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 100 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 179 (240)
+.+.+++..+++.+++++++++.++|+++..+..........++++|.++++|+++++++.+++++.+ ++++++.||+|
T Consensus 269 ~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~~~~~YG~T 347 (547)
T PRK13295 269 LQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAAL-GAKIVSAWGMT 347 (547)
T ss_pred eCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHh-CCCeEEeccCC
Confidence 99889999999999999999999999999999987766666788999999999999999999999998 89999999999
Q ss_pred ccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 180 EAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 180 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|++.....+. .........++|+|.++++++|+| +++++++.|+.|||+|+|+.++
T Consensus 348 E~~~~~~~~~---~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~ 403 (547)
T PRK13295 348 ENGAVTLTKL---DDPDERASTTDGCPLPGVEVRVVD-ADGAPLPAGQIGRLQVRGCSNF 403 (547)
T ss_pred CCCCeeeccC---CCcchhccCccccccCCcEEEEEC-CCCCCCCCCCCCeEEEEcCccc
Confidence 9986544331 111122346789999999999999 5689999999999999999875
No 17
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=1.3e-34 Score=247.45 Aligned_cols=213 Identities=23% Similarity=0.291 Sum_probs=174.8
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
.+.++++++|+|||||||.||+|.++|.++.......... .++++++|++++..|++|+.++...++.++..|++++
T Consensus 228 ~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v 304 (628)
T TIGR02316 228 WLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWA---IFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATV 304 (628)
T ss_pred ecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHH---hcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEE
Confidence 3578999999999999999999999999975443322221 3467889999999999999887667889999999999
Q ss_pred EccC----CCHHHHHHHHHhccceeeeechHHHHHHHhCCCC--CCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccc
Q 039504 100 LMQK----FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV--ADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILG 173 (240)
Q Consensus 100 ~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~ 173 (240)
+.+. .++..++++++++++|++.++|++++.|.+.... ...+++++|.++++|+++++++.+++++.+ +..++
T Consensus 305 ~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~-~~~~~ 383 (628)
T TIGR02316 305 LYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWITDGL-GKPVI 383 (628)
T ss_pred EeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHh-CCCEE
Confidence 8753 5789999999999999999999999998876432 345678999999999999999999999988 78899
Q ss_pred ccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCC
Q 039504 174 QGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQ 237 (240)
Q Consensus 174 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~ 237 (240)
+.||+||++..+..... .........+++|+|+|+++++|+|++++++++.|+.|||+|+||.
T Consensus 384 ~~yG~TE~~~~~~~~~~-~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Gel~v~gp~ 446 (628)
T TIGR02316 384 DNYWQTETGWPVLAIMP-GLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGVLTVVPPL 446 (628)
T ss_pred ecccccccCceeecCCC-CCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEEEEEecCC
Confidence 99999999854332211 1111123457889999999999999768999999999999999983
No 18
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.7e-34 Score=245.48 Aligned_cols=227 Identities=30% Similarity=0.436 Sum_probs=182.9
Q ss_pred chhhHhhcCCCCC--CCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHh
Q 039504 4 HFTVLSEADEDQI--PEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHI 81 (240)
Q Consensus 4 ~~~~l~~~~~~~~--~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~ 81 (240)
+|++.++...... ......++++++++|||||||.||+|.++|.++......... .+++.++|++++.+|++|.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~ 266 (632)
T PRK07529 191 DFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGAL----LLGLGPGDTVFCGLPLFHV 266 (632)
T ss_pred CHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHH----hcCCCCCCEEEEecCchhh
Confidence 4555544433221 223456799999999999999999999999999877655544 3456889999999999999
Q ss_pred hhhHHHHHHHhhcCceEEEccC--C-C---HHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCC
Q 039504 82 YSLNSVLLCSLRAGAGVLLMQK--F-E---IGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPL 155 (240)
Q Consensus 82 ~g~~~~~~~~l~~G~~~v~~~~--~-~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~ 155 (240)
.+....++.++..|+++++.++ + + ...++++++++++|++.++|+++..|.+.... ..+++++|.+++||+++
T Consensus 267 ~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~-~~~~~slr~v~~gg~~l 345 (632)
T PRK07529 267 NALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVD-GHDISSLRYALCGAAPL 345 (632)
T ss_pred hHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc-CCCccceEEEEEcCCCC
Confidence 9988778999999999998753 2 1 36789999999999999999999999886533 34678999999999999
Q ss_pred CHHHHHHHHHhCCCCcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeC-CCC---CCCCCCCCceE
Q 039504 156 GKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDP-ETG---ASLPHNQPGEI 231 (240)
Q Consensus 156 ~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~-~~~---~~~~~g~~Gel 231 (240)
++++.+++++.+ ++++++.||+||++.++..+. .......+++|+|+|+++++|++. +++ ++++.|+.|||
T Consensus 346 ~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~----~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel 420 (632)
T PRK07529 346 PVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVNP----PDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEVGVL 420 (632)
T ss_pred CHHHHHHHHHHh-CCcEeeeecccccCcccccCC----ccccccCCCcccccCCceEEEEEcCCCCcccccCCCCCceEE
Confidence 999999999998 899999999999987655432 112335678999999999988532 345 78999999999
Q ss_pred EEeCCCCCC
Q 039504 232 CIRGPQIMK 240 (240)
Q Consensus 232 ~v~~~~~~~ 240 (240)
+|+||++++
T Consensus 421 ~v~gp~v~~ 429 (632)
T PRK07529 421 CIAGPNVFS 429 (632)
T ss_pred EEECCCccc
Confidence 999999873
No 19
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=7.8e-35 Score=249.48 Aligned_cols=230 Identities=27% Similarity=0.401 Sum_probs=172.2
Q ss_pred chhhHhhcCCC-CCCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCC-CCccccCCcEEEEecchHHh
Q 039504 4 HFTVLSEADED-QIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGEN-PNLYLTNGDVVLCVLPLFHI 81 (240)
Q Consensus 4 ~~~~l~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~-~~~~~~~~d~~l~~~p~~~~ 81 (240)
.|+++.+.... ........++|+++|+|||||||.||||.++|+++..........+. ....+.++|++++++|++|+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~ 281 (666)
T PLN02614 202 AWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHI 281 (666)
T ss_pred EHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHH
Confidence 45555543321 11223356899999999999999999999999999887655433211 01246789999999999999
Q ss_pred hhhHHHHHHHhhcCceEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCC------------------------
Q 039504 82 YSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV------------------------ 137 (240)
Q Consensus 82 ~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~------------------------ 137 (240)
++.. ..+.++..|+++++.+ +++..+++.++++++|+++++|.+++.+......
T Consensus 282 ~~~~-~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 359 (666)
T PLN02614 282 FDRV-IEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNM 359 (666)
T ss_pred HHHH-HHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 9886 4566778899988864 6899999999999999999999999987642100
Q ss_pred -------CCC-------------Cc-cchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccccccchhhccCCCCCCC
Q 039504 138 -------ADY-------------DL-SSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPF 196 (240)
Q Consensus 138 -------~~~-------------~~-~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~ 196 (240)
... .+ +++|.+++||+++++++ +++.+.++++++++.||+||++...+... ...
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~----~~~ 434 (666)
T PLN02614 360 KKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSL----PDE 434 (666)
T ss_pred HcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeec----ccc
Confidence 000 01 47899999999999875 56666665689999999999875433221 111
Q ss_pred CCCCCccccccCCceEEEeeC-C-CCCCCCCCCCceEEEeCCCCCC
Q 039504 197 PTKSGSCGTVVRNAELKVIDP-E-TGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 197 ~~~~~~~G~~~~~~~v~i~d~-~-~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
....+++|+|.|+++++|+|. + .+++++.|+.|||+|+||.+|+
T Consensus 435 ~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~ 480 (666)
T PLN02614 435 LDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFS 480 (666)
T ss_pred CCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccc
Confidence 224578999999999999983 3 2478999999999999999874
No 20
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-34 Score=245.32 Aligned_cols=228 Identities=25% Similarity=0.386 Sum_probs=181.8
Q ss_pred hhhHhhcCCCCCCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhh
Q 039504 5 FTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSL 84 (240)
Q Consensus 5 ~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~ 84 (240)
++++.+......+.....++|+++|+|||||||.||+|.++|.++.......... .++++++|++++..|++|+.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~ 302 (637)
T PRK00174 226 WHELVAGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKY---VFDYKDGDVYWCTADVGWVTGH 302 (637)
T ss_pred HHHHHhhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHh---ccCCCCCcEEEEcCCchHhhhh
Confidence 4444443333333445678899999999999999999999999976554332221 3467889999999999999887
Q ss_pred HHHHHHHhhcCceEEEccC----CCHHHHHHHHHhccceeeeechHHHHHHHhCCCC--CCCCccchhhhhccCCCCCHH
Q 039504 85 NSVLLCSLRAGAGVLLMQK----FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV--ADYDLSSIRVVLSGAAPLGKE 158 (240)
Q Consensus 85 ~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~lr~v~~~G~~~~~~ 158 (240)
...++.++..|+++++.+. .++..+++.++++++|++.++|++++.|++.... ....++++|.++++|++++++
T Consensus 303 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~ 382 (637)
T PRK00174 303 SYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPE 382 (637)
T ss_pred HHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHH
Confidence 7678899999999988653 5799999999999999999999999999886543 234578899999999999999
Q ss_pred HHHHHHHhCCC--CcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeC-
Q 039504 159 LEDALRSRVPQ--AILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRG- 235 (240)
Q Consensus 159 ~~~~~~~~~~~--~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~- 235 (240)
+.+++.+.++. +++++.||+||++..+..... .......+++|+|+++++++|+| +++++++.|+.|||+|+|
T Consensus 383 ~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~---~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~ 458 (637)
T PRK00174 383 AWEWYYKVVGGERCPIVDTWWQTETGGIMITPLP---GATPLKPGSATRPLPGIQPAVVD-EEGNPLEGGEGGNLVIKDP 458 (637)
T ss_pred HHHHHHHHhCCCCCceEecccccccCCceEecCC---CCCCcCCCcccCCCCCceEEEEC-CCCCCCCCCCcEEEEEcCC
Confidence 99999998842 789999999999875543211 11223457899999999999999 678999999999999999
Q ss_pred -CCCC
Q 039504 236 -PQIM 239 (240)
Q Consensus 236 -~~~~ 239 (240)
|+++
T Consensus 459 ~p~~~ 463 (637)
T PRK00174 459 WPGMM 463 (637)
T ss_pred CCccc
Confidence 4554
No 21
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=1.5e-35 Score=242.06 Aligned_cols=211 Identities=41% Similarity=0.642 Sum_probs=174.6
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhh-cCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEE
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQV-DGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL 100 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~-~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 100 (240)
.++++++++|||||||.||+|.++|.++...+..+. .. ..+++ |++++.+|++|.+|+...++.++..|+++++
T Consensus 153 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~---~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~ 227 (417)
T PF00501_consen 153 SPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPE---YFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVL 227 (417)
T ss_dssp TTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHH---TTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEE
T ss_pred CccceeEeecccccccccccccccccccccccccccccc---ccccC--ceEEeeccccccccccccccccccccccccc
Confidence 579999999999999999999999999988876653 10 11122 6999999999999996689999999999999
Q ss_pred ccCCC---HHHHHHHHHhccceeeeechHHHHHHHhCCCC----CCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccc
Q 039504 101 MQKFE---IGALLELIQRHRVSVAAVVPPLVLALAKNPMV----ADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILG 173 (240)
Q Consensus 101 ~~~~~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~----~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~ 173 (240)
.+... ++.+++.+++++++++.++|++++.+.+..+. ....++++|.++++|+++++++.+++++.++.++++
T Consensus 228 ~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~ 307 (417)
T PF00501_consen 228 PSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPII 307 (417)
T ss_dssp ESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEE
T ss_pred cccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccccce
Confidence 98754 47789999999999999999999999883222 134778899999999999999999999999656999
Q ss_pred ccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 174 QGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 174 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
+.||+||++.++.... ........+++|.|+|+++++|+|+++++++++|+.|||+|+||.+++
T Consensus 308 ~~YG~tE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~ 371 (417)
T PF00501_consen 308 NLYGSTETGSIATIRP---PEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFS 371 (417)
T ss_dssp EEEEEGGGSSEEEEEE---TTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBS
T ss_pred ecccccccceeeeccc---ccccccccccccccccccccccccccccccccccccccccccCCccce
Confidence 9999999998876432 111223567899999999999999888999999999999999998864
No 22
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.7e-34 Score=260.34 Aligned_cols=217 Identities=33% Similarity=0.547 Sum_probs=185.6
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
...+++|+++++|||||||.||+|.++|+++......... .++..++|++++.+|++|.+++...++.++..|+++
T Consensus 777 ~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~ 852 (1146)
T PRK08633 777 PTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD----VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKV 852 (1146)
T ss_pred CCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH----hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEE
Confidence 3456899999999999999999999999999888776655 445788999999999999999986678889999998
Q ss_pred EEcc-CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccc
Q 039504 99 LLMQ-KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYG 177 (240)
Q Consensus 99 v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 177 (240)
++.+ .++++.+++.++++++|++.++|++++.+.+........++++|.+++||+++++++.+++++.+ ++++++.||
T Consensus 853 v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG 931 (1146)
T PRK08633 853 VYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF-GIRILEGYG 931 (1146)
T ss_pred EEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh-CCCeecccc
Confidence 8865 58999999999999999999999999999886655566778999999999999999999999998 789999999
Q ss_pred ccccccchhhccCCCC-----CCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 178 MTEAGPVLSMCLGFAK-----QPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 178 ~tE~~~~~~~~~~~~~-----~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
+||++.++........ .......+++|+|.|+++++|+|+++++++|.|+.|||+|+|+.+++
T Consensus 932 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~ 999 (1146)
T PRK08633 932 ATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMK 999 (1146)
T ss_pred cccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccc
Confidence 9999876554321110 01123467899999999999999989999999999999999998763
No 23
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=6.8e-35 Score=238.77 Aligned_cols=231 Identities=28% Similarity=0.404 Sum_probs=181.8
Q ss_pred CcchhhHhhcCCCCC-CC-CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCC--CCccccCCcEEEEecc
Q 039504 2 CLHFTVLSEADEDQI-PE-VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGEN--PNLYLTNGDVVLCVLP 77 (240)
Q Consensus 2 ~~~~~~l~~~~~~~~-~~-~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~--~~~~~~~~d~~l~~~p 77 (240)
+.+|+|+++...... .. .+..|+|.+.|.|||||||+||||.+||+|+...+........ ........|++++++|
T Consensus 231 v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLP 310 (691)
T KOG1256|consen 231 VYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLP 310 (691)
T ss_pred EEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCc
Confidence 357888888764332 23 4788999999999999999999999999999886543221111 1112334699999999
Q ss_pred hHHhhhhHHHHHHHhhcCceEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCC--------------------
Q 039504 78 LFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV-------------------- 137 (240)
Q Consensus 78 ~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~-------------------- 137 (240)
+.|++.... ....+..|+.+-+.+ .|+..+.+-+++.+||++.++|.+|+.+.+....
T Consensus 311 LAHi~er~~-~~~~~~~G~~IgF~~-gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k 388 (691)
T KOG1256|consen 311 LAHIFERVV-ELYTFYIGAKIGFAR-GDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYK 388 (691)
T ss_pred HHHHHHHHH-HHhHhhcccEEEEec-CChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 999999984 445557888888776 6888888889999999999999999988651110
Q ss_pred ------CCCCc-------------------cchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccccccchhhccCCC
Q 039504 138 ------ADYDL-------------------SSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFA 192 (240)
Q Consensus 138 ------~~~~~-------------------~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~ 192 (240)
.+... ..+|.+++|+.|+++++...++..+ +++|++.||+||+++.++..
T Consensus 389 ~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlTEts~g~~~~---- 463 (691)
T KOG1256|consen 389 LEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLTETSAGTTLT---- 463 (691)
T ss_pred HHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc-CceeeecccccccCCceEec----
Confidence 01110 2588999999999999999999998 89999999999998544443
Q ss_pred CCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 193 KQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 193 ~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
...+...+++|.|+|+++++++|+++.+.-+.|..|||||+|+.||+
T Consensus 464 -~~~d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~ 510 (691)
T KOG1256|consen 464 -LPGDNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFM 510 (691)
T ss_pred -cCCCCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhce
Confidence 22233789999999999999999888888899999999999999985
No 24
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1.2e-33 Score=238.15 Aligned_cols=219 Identities=37% Similarity=0.648 Sum_probs=177.1
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....++++++++|||||||.||+|.++|.++........... .......++.+..+|++|.+++...++.++..|+++
T Consensus 179 ~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~ 256 (546)
T PLN02330 179 EEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSV--GPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKV 256 (546)
T ss_pred ccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhcc--CccccCceEEEEecChHHHHHHHHHHHHHhhcCCEE
Confidence 345578999999999999999999999999887654322111 111234567889999999999877788899999999
Q ss_pred EEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCcc--chhhhhccCCCCCHHHHHHHHHhCCCCcccccc
Q 039504 99 LLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLS--SIRVVLSGAAPLGKELEDALRSRVPQAILGQGY 176 (240)
Q Consensus 99 v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~--~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 176 (240)
++.+++++..+++.++++++|++.++|+++..+.+........+. ++|.++++|+++++++++++.+.|+++++++.|
T Consensus 257 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~Y 336 (546)
T PLN02330 257 VVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAY 336 (546)
T ss_pred EEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCCCeEEecc
Confidence 999999999999999999999999999999999886544443343 478899999999999999999999889999999
Q ss_pred cccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 177 GMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 177 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|+||++.+...+.............++|+|.|+++++|+|+++++++|.|+.|||+|+|+.++
T Consensus 337 G~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~~~ 399 (546)
T PLN02330 337 GLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQCVM 399 (546)
T ss_pred cccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCceEEEEecchhh
Confidence 999997554332111111112334689999999999999988899999999999999999875
No 25
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=1.4e-34 Score=239.16 Aligned_cols=198 Identities=39% Similarity=0.527 Sum_probs=164.7
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCcc-ccCCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLY-LTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
....++|++.|+|||||||.||||.+||+|+.+++..+.. ... ++++|++++++|+.|++.........+..|.+
T Consensus 186 ~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~----~~~~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~ 261 (613)
T COG1022 186 APPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDE----VLPPIGPGDRVLSFLPLAHIFERAFEGGLALYGGVT 261 (613)
T ss_pred CCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHh----hCCCCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceE
Confidence 4577999999999999999999999999999999988877 343 78999999999999999987434444444444
Q ss_pred EEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCC----C------------------------C----------
Q 039504 98 VLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV----A------------------------D---------- 139 (240)
Q Consensus 98 ~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~----~------------------------~---------- 139 (240)
... ..+++.+++-+++++||+++++|.+|+.+.+.... . +
T Consensus 262 ~~~--~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~ 339 (613)
T COG1022 262 VLF--KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLGGGPLSWLLVA 339 (613)
T ss_pred EEe--cCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhcccCCcchhhhh
Confidence 443 56899999999999999999999999988641100 0 0
Q ss_pred ---------CCc-cchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccccccchhhccCCCCCCCCCCCCccccccCC
Q 039504 140 ---------YDL-SSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRN 209 (240)
Q Consensus 140 ---------~~~-~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 209 (240)
..+ .++|.+++||.++++++...++.. ++++.+.||+||++++.+.+ .+.+...+++|+|+|+
T Consensus 340 d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~-----~~~~~~~gtvG~p~p~ 412 (613)
T COG1022 340 DRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVN-----PPDRFVLGTVGKPLPG 412 (613)
T ss_pred hHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEc-----cccCcccCCcCCcCCC
Confidence 001 267889999999999999999998 79999999999999888776 4456778999999999
Q ss_pred ceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 210 AELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 210 ~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
++++|.| + |||+||||.||+
T Consensus 413 ~evKI~d-~----------GEilVRG~~Vm~ 432 (613)
T COG1022 413 IEVKIAD-D----------GEILVRGPNVMK 432 (613)
T ss_pred ceEEEcc-C----------ceEEEecchhcc
Confidence 9999998 4 999999999985
No 26
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=2.5e-34 Score=246.52 Aligned_cols=225 Identities=31% Similarity=0.411 Sum_probs=175.9
Q ss_pred chhhHhhcCCCC-CCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhh
Q 039504 4 HFTVLSEADEDQ-IPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIY 82 (240)
Q Consensus 4 ~~~~l~~~~~~~-~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~ 82 (240)
+|+++++..... .......++|+++|+|||||||.||+|.++|+++...+..... .+++.++|++++.+|++|.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~----~~~~~~~d~~l~~lPl~h~~ 275 (651)
T PLN02736 200 TYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSL----STKFYPSDVHISYLPLAHIY 275 (651)
T ss_pred EHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHh----ccCCCCCCEEEEeCCHHHHH
Confidence 455555433221 2233457899999999999999999999999999888776655 44678899999999999999
Q ss_pred hhHHHHHHHhhcCceEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCC--------------------------
Q 039504 83 SLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPM-------------------------- 136 (240)
Q Consensus 83 g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~-------------------------- 136 (240)
++. ..+.++..|+++++.+. ++..+++.++++++|++.++|.+++.+.+...
T Consensus 276 ~~~-~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (651)
T PLN02736 276 ERV-NQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALE 353 (651)
T ss_pred HHH-HHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 997 57788999999988764 88899999999999999999999988765310
Q ss_pred ---CCCC------------Cc-cchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccccccchhhccCCCCCCCCCCC
Q 039504 137 ---VADY------------DL-SSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKS 200 (240)
Q Consensus 137 ---~~~~------------~~-~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~ 200 (240)
.... .+ +++|.+++||+++++++.+++++.+ +.++++.||+||++..+... .......
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~-----~~~~~~~ 427 (651)
T PLN02736 354 NGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICF-GGRVLEGYGMTETSCVISGM-----DEGDNLS 427 (651)
T ss_pred cCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHh-CCCeEEEechHHhchheecc-----CCCCCCC
Confidence 0000 01 3789999999999999999999988 78899999999997655433 1123456
Q ss_pred CccccccCCceEEEeeCCCCCC---CCCCCCceEEEeCCCCCC
Q 039504 201 GSCGTVVRNAELKVIDPETGAS---LPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 201 ~~~G~~~~~~~v~i~d~~~~~~---~~~g~~Gel~v~~~~~~~ 240 (240)
+++|+|.|+++++|+|.+++.. ..+++.|||+|+||++|+
T Consensus 428 ~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~ 470 (651)
T PLN02736 428 GHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFK 470 (651)
T ss_pred CccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCcccc
Confidence 7899999999999999543332 233457999999999874
No 27
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.6e-34 Score=238.19 Aligned_cols=209 Identities=21% Similarity=0.346 Sum_probs=176.8
Q ss_pred CCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEE
Q 039504 21 IEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL 100 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 100 (240)
..+++.++++|||||||.||+|.++|.++......... ...+.++++++...|++|.+++. .++.++..|+++++
T Consensus 193 ~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~g~~-~~~~~l~~g~~~~~ 267 (537)
T PRK13382 193 PTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILD----RTPWRAEEPTVIVAPMFHAWGFS-QLVLAASLACTIVT 267 (537)
T ss_pred CCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHH----hhCCCCCCeEEEecChHhhhHHH-HHHHHHhcCcEEEE
Confidence 34678999999999999999999999888776665544 33567889999999999999986 67888899999999
Q ss_pred ccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCC--CCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 101 MQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV--ADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 101 ~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
...++++.+++.++++++|++.++|++++.|.+.... ...+++++|.+++||+++++++++.+.+.+ +.++++.||+
T Consensus 268 ~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~ 346 (537)
T PRK13382 268 RRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQF-GDVIYNNYNA 346 (537)
T ss_pred CCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHc-CCcEEecccc
Confidence 8889999999999999999999999999999876432 223456899999999999999999999999 6789999999
Q ss_pred cccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 179 TEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 179 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
||++.++..+.. ......+++|+|.+++.++|+| +++++++.|+.|||+|+||++++
T Consensus 347 TE~~~~~~~~~~----~~~~~~~~vG~p~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~~~~ 403 (537)
T PRK13382 347 TEAGMIATATPA----DLRAAPDTAGRPAEGTEIRILD-QDFREVPTGEVGTIFVRNDTQFD 403 (537)
T ss_pred cccCcceecChh----HhccCCCCccccCcCcEEEEEC-CCCCCCCCCCeeEEEEEcCCccc
Confidence 999876544321 1123457899999999999999 56899999999999999998863
No 28
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-33 Score=236.84 Aligned_cols=215 Identities=31% Similarity=0.471 Sum_probs=185.7
Q ss_pred CCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCc
Q 039504 17 PEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGA 96 (240)
Q Consensus 17 ~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 96 (240)
......++++++++|||||||.||++.++|.++......... .+++.++|+++..+|++|..++...++.++..|+
T Consensus 164 ~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~ 239 (523)
T PRK08316 164 PDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIV----AGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGA 239 (523)
T ss_pred CccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----HhCCCCCceEEEccCCchhhhHHHHHHHHHhcCc
Confidence 344567789999999999999999999999999887665544 3467889999999999999988756777889999
Q ss_pred eEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccc
Q 039504 97 GVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGY 176 (240)
Q Consensus 97 ~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 176 (240)
++++.+..+++.+++.++++++|++.++|+++..+.+........++++|.+++||++++.++.+.+++.+++.++++.|
T Consensus 240 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~Y 319 (523)
T PRK08316 240 TNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCY 319 (523)
T ss_pred eEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeee
Confidence 99999889999999999999999999999999999988766666778999999999999999999999999888999999
Q ss_pred cccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 177 GMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 177 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|+||++.+...+.. .......+++|+|.++++++|+| +++++++.|+.|||+|+|+.++
T Consensus 320 G~tE~~~~~~~~~~---~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gei~v~~~~~~ 378 (523)
T PRK08316 320 GQTEIAPLATVLGP---EEHLRRPGSAGRPVLNVETRVVD-DDGNDVAPGEVGEIVHRSPQLM 378 (523)
T ss_pred cccccCccccccCc---cccccccCCcccCCCCcEEEEEc-CCCCCCCCCCcceEEEECCchh
Confidence 99999876554321 11223457899999999999999 6689999999999999998765
No 29
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-33 Score=235.89 Aligned_cols=229 Identities=34% Similarity=0.517 Sum_probs=191.5
Q ss_pred chhhHhhcCCCCCCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhh
Q 039504 4 HFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYS 83 (240)
Q Consensus 4 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g 83 (240)
++++++.............++++++++|||||||.||++.++|.++......... .+++.++|+++..+|++|.++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~ 222 (521)
T PRK06187 147 EYEELLAAASDTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCA----WLKLSRDDVYLVIVPMFHVHA 222 (521)
T ss_pred cHHHHhhcCCccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHH----hhCCCCCCEEEEeCCchHHhh
Confidence 4556655555444455667889999999999999999999999998877766555 456889999999999999988
Q ss_pred hHHHHHHHhhcCceEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHH
Q 039504 84 LNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDAL 163 (240)
Q Consensus 84 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~ 163 (240)
+. ..+.++..|+++++.+..++..+++.+++++++++.++|++++.+.+........++++|.++++|++++.++++.+
T Consensus 223 ~~-~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~ 301 (521)
T PRK06187 223 WG-LPYLALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREF 301 (521)
T ss_pred HH-HHHHHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHH
Confidence 87 44559999999999988899999999999999999999999999999887767788899999999999999999999
Q ss_pred HHhCCCCcccccccccccccchhhccCCCCC-CCCCCCCccccccCCceEEEeeCCCCCCCCC--CCCceEEEeCCCCC
Q 039504 164 RSRVPQAILGQGYGMTEAGPVLSMCLGFAKQ-PFPTKSGSCGTVVRNAELKVIDPETGASLPH--NQPGEICIRGPQIM 239 (240)
Q Consensus 164 ~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~-~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~--g~~Gel~v~~~~~~ 239 (240)
.+.| ++++++.||+||++.+...+...... .......++|+|.+++.++|+| +++++++. |+.|||+|+|+.++
T Consensus 302 ~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~ 378 (521)
T PRK06187 302 KEKF-GIDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVD-DDGDELPPDGGEVGEIIVRGPWLM 378 (521)
T ss_pred HHHh-CcchheeeccCccCcccccCCcccccccccccCCccccccCCeEEEEEC-CCCCCCCCCCCCeeEEEEECcchh
Confidence 9999 89999999999998765543211000 0012567899999999999999 55789998 99999999998764
No 30
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.5e-33 Score=238.16 Aligned_cols=214 Identities=29% Similarity=0.536 Sum_probs=183.4
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++++++++|||||||.||+|.++|.++......... .++++++|+++..+|++|..++...++.++..|++++
T Consensus 195 ~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~ 270 (559)
T PRK08315 195 TLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGE----AMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMV 270 (559)
T ss_pred cCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHH----hcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEE
Confidence 456788999999999999999999999999887776655 4568899999999999999998877889999999998
Q ss_pred E-ccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 100 L-MQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 100 ~-~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
+ ...+++..+++.++++++|+++++|+++..+..........++++|.++++|++++.++.+.+.+.++..++++.||+
T Consensus 271 ~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~ 350 (559)
T PRK08315 271 YPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGM 350 (559)
T ss_pred EecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcc
Confidence 4 456899999999999999999999999998887766555677899999999999999999999999966679999999
Q ss_pred cccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 179 TEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 179 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
||++.++..+... ........++|+|.|++.++|+|++++++++.|+.|||+|+|+.++
T Consensus 351 tE~~~~~~~~~~~--~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~ 409 (559)
T PRK08315 351 TETSPVSTQTRTD--DPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELCTRGYSVM 409 (559)
T ss_pred cccccceeecCcc--cchhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEEEECchhh
Confidence 9998765543211 1112346789999999999999987799999999999999998775
No 31
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.8e-34 Score=243.23 Aligned_cols=209 Identities=21% Similarity=0.327 Sum_probs=168.8
Q ss_pred CCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 18 EVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
...++++|+++|+|||||||.||+|+++|.+.+......... ......+|++++..|++|+.+.. .++.++..|++
T Consensus 248 ~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~w~~~~~-~~~~~l~~G~t 323 (647)
T PTZ00237 248 YVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRS---IIEKDIPTVVFSHSSIGWVSFHG-FLYGSLSLGNT 323 (647)
T ss_pred ceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHH---hcCCCCCcEEEEcCCCceEeeHH-HHHHHHhCCcE
Confidence 345678999999999999999999999999843333222111 23457789999999999986654 67889999999
Q ss_pred EEEccC--CC----HHHHHHHHHhccceeeeechHHHHHHHhCCCC-----CCCCccchhhhhccCCCCCHHHHHHHHHh
Q 039504 98 VLLMQK--FE----IGALLELIQRHRVSVAAVVPPLVLALAKNPMV-----ADYDLSSIRVVLSGAAPLGKELEDALRSR 166 (240)
Q Consensus 98 ~v~~~~--~~----~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~-----~~~~~~~lr~v~~~G~~~~~~~~~~~~~~ 166 (240)
+++.++ +. +..+++.++++++|++.++|++++.|.+.... ...+++++|.++++|+++++++.+++++.
T Consensus 324 ~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~ 403 (647)
T PTZ00237 324 FVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENK 403 (647)
T ss_pred EEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCcchheEEEecCccCCHHHHHHHHHh
Confidence 998753 22 68899999999999999999999999875322 23467899999999999999999999999
Q ss_pred CCCCcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCC
Q 039504 167 VPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGP 236 (240)
Q Consensus 167 ~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 236 (240)
+ ++++++.||+||++..+.... .......+++|+|.|+++++|+| +++++++.|+.|||+|++|
T Consensus 404 ~-g~~i~~~yG~TE~~~~~~~~~----~~~~~~~~s~G~p~~g~~~~i~d-~~g~~~~~ge~GEl~v~~p 467 (647)
T PTZ00237 404 L-KIKSSRGYGQTEIGITYLYCY----GHINIPYNATGVPSIFIKPSILS-EDGKELNVNEIGEVAFKLP 467 (647)
T ss_pred c-CCCEEeeechHHhChhhhccC----CCCCCCCCCCccCcCCceEEEEC-CCCCCCCCCCceEEEEecc
Confidence 8 789999999999986543321 11122347899999999999999 5799999999999999986
No 32
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-33 Score=233.43 Aligned_cols=204 Identities=24% Similarity=0.375 Sum_probs=174.3
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.++++++++|||||||.||+|.++|.++......... .+++.++|+++...|++|..++. .++.++..|+++++.
T Consensus 141 ~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~d~~~~~~~l~~~~~l~-~~~~~l~~g~~~~~~ 215 (487)
T PRK07638 141 VQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVH----DFHMKREDSVLIAGTLVHSLFLY-GAISTLYVGQTVHLM 215 (487)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----hcCcCCCCEEEEeecchHHHHHH-HHHHHHccCcEEEEc
Confidence 3467899999999999999999999999887766554 44678899999999999987765 678899999999999
Q ss_pred cCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccccc
Q 039504 102 QKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEA 181 (240)
Q Consensus 102 ~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~ 181 (240)
+.+++.++++.++++++|++.++|++++.|.+... ...+.+.++++|++++.++.+++.+.|++.++++.||+||+
T Consensus 216 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 291 (487)
T PRK07638 216 RKFIPNQVLDKLETENISVMYTVPTMLESLYKENR----VIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASEL 291 (487)
T ss_pred CCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC----cCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCcc
Confidence 99999999999999999999999999999988732 23355667789999999999999999988999999999999
Q ss_pred ccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 182 GPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
+.++..+. ........++|+|.+++.++|+| +++++++.|+.|||+|+|+.++
T Consensus 292 ~~~~~~~~----~~~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~~~~ 344 (487)
T PRK07638 292 SFVTALVD----EESERRPNSVGRPFHNVQVRICN-EAGEEVQKGEIGTVYVKSPQFF 344 (487)
T ss_pred CceEEecc----cccCCCCCCCCcccCCcEEEEEC-CCCCCCCCCCCeEEEEecccce
Confidence 86654431 12234567899999999999999 6699999999999999999875
No 33
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=5.8e-34 Score=244.16 Aligned_cols=230 Identities=26% Similarity=0.390 Sum_probs=169.3
Q ss_pred chhhHhhcCCCCCCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCC-CccccCCcEEEEecchHHhh
Q 039504 4 HFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENP-NLYLTNGDVVLCVLPLFHIY 82 (240)
Q Consensus 4 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~-~~~~~~~d~~l~~~p~~~~~ 82 (240)
+|+++.+............++|+++|+|||||||.||||.++|.++..........+.. ...+.++|++++.+|++|++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~ 279 (660)
T PLN02861 200 SWEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVY 279 (660)
T ss_pred EHHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHH
Confidence 45555543322222334568999999999999999999999999998876554332110 01246789999999999999
Q ss_pred hhHHHHHHHhhcCceEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCC---------------------------
Q 039504 83 SLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNP--------------------------- 135 (240)
Q Consensus 83 g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~--------------------------- 135 (240)
+.. ..+.+++.|+++++. ++++..+++.++++++|++.++|.+++.+....
T Consensus 280 ~~~-~~~~~l~~G~~v~~~-~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~ 357 (660)
T PLN02861 280 DQV-IETYCISKGASIGFW-QGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLR 357 (660)
T ss_pred HHH-HHHHHHHhCCEEEEe-CCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHh
Confidence 987 355678999998887 468999999999999999999999999886410
Q ss_pred ----------CCCCC-------Cc-cchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccccccchhhccCCCCCCCC
Q 039504 136 ----------MVADY-------DL-SSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFP 197 (240)
Q Consensus 136 ----------~~~~~-------~~-~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~ 197 (240)
..... .+ .++|.+++||+++++++.+ +.+.++...+++.||+||++..+.... ....
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~-~~~~~~~~~l~~~YG~TE~~~~~~~~~----~~~~ 432 (660)
T PLN02861 358 KGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEE-FLRVTSCSVLSQGYGLTESCGGCFTSI----ANVF 432 (660)
T ss_pred cCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHH-HHHHHcCCCeeEecchhhhhhceeecc----cccC
Confidence 00000 01 3689999999999999855 556664457999999999875543321 1112
Q ss_pred CCCCccccccCCceEEEee-CCCC-CCCCCCCCceEEEeCCCCCC
Q 039504 198 TKSGSCGTVVRNAELKVID-PETG-ASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 198 ~~~~~~G~~~~~~~v~i~d-~~~~-~~~~~g~~Gel~v~~~~~~~ 240 (240)
...+++|+|.|+++++|+| ++.+ ..++.++.|||+|+||++|+
T Consensus 433 ~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~ 477 (660)
T PLN02861 433 SMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFS 477 (660)
T ss_pred CCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccc
Confidence 2457899999999999998 3434 44566778999999999874
No 34
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-33 Score=232.68 Aligned_cols=210 Identities=32% Similarity=0.488 Sum_probs=179.1
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++++++++|||||||.||++.++|.++......... .+++.++|+++..+|++|.+++....+.++..|++++
T Consensus 145 ~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~ 220 (496)
T PRK06839 145 EKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTF----AIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVII 220 (496)
T ss_pred CCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHH----HcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEE
Confidence 455688999999999999999999999998665544333 3457889999999999999998867788999999999
Q ss_pred EccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccc
Q 039504 100 LMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 100 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 179 (240)
+.+.++++.+++.++++++|++.++|++++.+.+........++++|.+++||+++++++.+.+++. ++++++.||+|
T Consensus 221 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~t 298 (496)
T PRK06839 221 VPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGFGMT 298 (496)
T ss_pred EccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCeeEeeccCC
Confidence 9888999999999999999999999999999998876666678899999999999999999999886 78999999999
Q ss_pred ccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 180 EAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 180 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|++..+.... ........+++|+|.++++++|+|+ +++.++.|+.|||+|+|+.++
T Consensus 299 E~~~~~~~~~---~~~~~~~~~~~G~p~~~~~~~i~d~-~~~~~~~g~~Gel~v~~~~~~ 354 (496)
T PRK06839 299 ETSPTVFMLS---EEDARRKVGSIGKPVLFCDYELIDE-NKNKVEVGEVGELLIRGPNVM 354 (496)
T ss_pred CCCcceEecc---cccccccCCCCcccCCCceEEEECC-CcCCCCCCCceEEEEECCCcc
Confidence 9986543321 1122344678999999999999995 467799999999999999875
No 35
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-33 Score=232.05 Aligned_cols=212 Identities=29% Similarity=0.431 Sum_probs=181.0
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++++++++|||||||.||+|.++|.++......... .+++..+++++...|++|.+++....+..+..|++++
T Consensus 145 ~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~ 220 (497)
T PRK06145 145 AVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVI----ALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLR 220 (497)
T ss_pred CCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----hhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEE
Confidence 456789999999999999999999999998765544433 3467889999999999999888756677889999999
Q ss_pred EccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccc
Q 039504 100 LMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 100 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 179 (240)
+.+.+++..+++.++++++|++.++|++++.++.........++++|.+++||++++.++.+++.+.|++.++++.||+|
T Consensus 221 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~t 300 (497)
T PRK06145 221 IHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLT 300 (497)
T ss_pred ECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCc
Confidence 98889999999999999999999999999999987666556678899999999999999999999999888999999999
Q ss_pred ccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 180 EAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 180 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|++..+..... .......+++|+|.++++++++| +++++++.|+.|||+|+|++++
T Consensus 301 E~~~~~~~~~~---~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~ 356 (497)
T PRK06145 301 ETCSGDTLMEA---GREIEKIGSTGRALAHVEIRIAD-GAGRWLPPNMKGEICMRGPKVT 356 (497)
T ss_pred ccCCcceeccC---ccccccCCCcccCCCCceEEEEC-CCCCCCCCCCceEEEEECcchh
Confidence 99875443211 11123456899999999999999 5688999999999999999876
No 36
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=2.7e-33 Score=235.62 Aligned_cols=211 Identities=27% Similarity=0.395 Sum_probs=181.0
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++++++++|||||||.||++.++|+++...+..... .+++.++|+++..+|++|..++...++.++..|.+++
T Consensus 191 ~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~ 266 (538)
T TIGR03208 191 RPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAE----RLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAV 266 (538)
T ss_pred CCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHh----hcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEE
Confidence 356789999999999999999999999999888776655 3457889999999999999888767889999999999
Q ss_pred EccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccc
Q 039504 100 LMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 100 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 179 (240)
+.+.+++..+++.+++++++++..+|+++..+..........++++|.++++|+++++++.+++.+.+ ++++++.||+|
T Consensus 267 ~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~t 345 (538)
T TIGR03208 267 LQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELL-GALIVSAWGMT 345 (538)
T ss_pred ecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHc-CCeEEeeeccC
Confidence 98889999999999999999999999999998876554455678999999999999999999999988 78999999999
Q ss_pred ccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 180 EAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 180 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|++.+...... ........++|+|.|+++++|+| +++++++.|+.|||+|+|+.++
T Consensus 346 E~~~~~~~~~~---~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~~g~~Gel~v~g~~~~ 401 (538)
T TIGR03208 346 ENGAVTVTEPD---DALEKASTTDGRPLPGVEVKVID-ANGAKLSQGETGRLLVRGCSNF 401 (538)
T ss_pred cCCCccccCcc---cchhhccCcccccCCCCEEEEEC-CCCCCCcCCCCcEEEEecCccc
Confidence 99866543311 11122345789999999999999 6689999999999999999875
No 37
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.8e-33 Score=236.36 Aligned_cols=212 Identities=31% Similarity=0.512 Sum_probs=180.1
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccc-cCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYL-TNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~-~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
...++++++++|||||||.||+|.++|.++........... .++ ..+++++..+|++|.+|+...+..++..|+++
T Consensus 215 ~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~ 291 (573)
T PRK05605 215 RPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWV---PGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGEL 291 (573)
T ss_pred CCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhc---cccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEE
Confidence 45678999999999999999999999999877665433211 112 34689999999999999876677889999999
Q ss_pred EEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 99 LLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 99 v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
++.+..+++.+++.++++++|++.++|++++.+.+........++++|.+++||+++++++.+++.+.+ +.++++.||+
T Consensus 292 ~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-~~~i~~~YG~ 370 (573)
T PRK05605 292 VLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGAMALPVSTVELWEKLT-GGLLVEGYGL 370 (573)
T ss_pred EEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEECCCcCCHHHHHHHHHHh-CCCeeccccc
Confidence 998889999999999999999999999999999988777777788999999999999999999999987 7889999999
Q ss_pred cccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCC-CCCCCCCCCceEEEeCCCCC
Q 039504 179 TEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPET-GASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 179 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~-~~~~~~g~~Gel~v~~~~~~ 239 (240)
||++.++..+.. ......+++|+|.|++.++|+|+++ +++++.|+.|||+|+|+.++
T Consensus 371 TE~~~~~~~~~~----~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v~~~~~~ 428 (573)
T PRK05605 371 TETSPIIVGNPM----SDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLVRGPQVF 428 (573)
T ss_pred chhchhhhcCCc----ccCCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEEecCchh
Confidence 999876654321 1223457899999999999999776 68999999999999998765
No 38
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=4.3e-33 Score=232.69 Aligned_cols=210 Identities=33% Similarity=0.507 Sum_probs=181.1
Q ss_pred CCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 18 EVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
.....++++++++|||||||.||++.++|.++......... .+++.++|+++..+|++|..++....+.++..|++
T Consensus 150 ~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 225 (504)
T PRK07514 150 TVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVD----YWRFTPDDVLIHALPIFHTHGLFVATNVALLAGAS 225 (504)
T ss_pred cccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHH----HhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcE
Confidence 34456789999999999999999999999999887765544 34578899999999999999987677899999999
Q ss_pred EEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccc
Q 039504 98 VLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYG 177 (240)
Q Consensus 98 ~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 177 (240)
+++.+..++..+++.+ .++|++.++|+++..+..........++++|.++.||+++++++.+.+.+.+ +.++++.||
T Consensus 226 ~~~~~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG 302 (504)
T PRK07514 226 MIFLPKFDPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERT-GHAILERYG 302 (504)
T ss_pred EEECCCCCHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeecc
Confidence 9999889999999999 3799999999999999887665566778999999999999999999999998 788999999
Q ss_pred ccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 178 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 178 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
+||++...... ........++|+|+++++++|+||+++++++.|+.|||+|+|+.++
T Consensus 303 ~tE~~~~~~~~-----~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~ 359 (504)
T PRK07514 303 MTETNMNTSNP-----YDGERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVF 359 (504)
T ss_pred cccccccccCC-----ccccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCcc
Confidence 99987554321 1122345688999999999999999999999999999999999875
No 39
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=2.9e-33 Score=236.49 Aligned_cols=210 Identities=32% Similarity=0.440 Sum_probs=172.6
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++++++++|||||||.||+|.++|.++......... .+++.++|+++...|++|..++. .++.++..|++++
T Consensus 168 ~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~-~~~~~l~~G~~~v 242 (563)
T PLN02860 168 AWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIA----IVGYGEDDVYLHTAPLCHIGGLS-SALAMLMVGACHV 242 (563)
T ss_pred CCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHh----hcCCCCCCEEEEecCchhhccHH-HHHHHHHcCceEE
Confidence 346789999999999999999999999998776655443 44678899999999999999986 5788999999999
Q ss_pred EccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCC--CCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccc
Q 039504 100 LMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVA--DYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYG 177 (240)
Q Consensus 100 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~--~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 177 (240)
+.+++++..+++.++++++|++.++|+++..|.+..... ...++++|.+++||+++++++.+.+++.|++.++++.||
T Consensus 243 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG 322 (563)
T PLN02860 243 LLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYG 322 (563)
T ss_pred ecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCC
Confidence 998999999999999999999999999999998764322 245678999999999999999999999998899999999
Q ss_pred ccccccchhhccCCCCC-----------------C-CCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 178 MTEAGPVLSMCLGFAKQ-----------------P-FPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 178 ~tE~~~~~~~~~~~~~~-----------------~-~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
+||++..+......... . ......++|+|.|+++++|+|++ .|+.|||+|+||.++
T Consensus 323 ~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~------~g~~Gel~v~g~~~~ 396 (563)
T PLN02860 323 MTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE------SSRVGRILTRGPHVM 396 (563)
T ss_pred ccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC------CCceeEEEEecCccc
Confidence 99987554332111100 0 01112368999999999999843 688999999999876
Q ss_pred C
Q 039504 240 K 240 (240)
Q Consensus 240 ~ 240 (240)
+
T Consensus 397 ~ 397 (563)
T PLN02860 397 L 397 (563)
T ss_pred c
Confidence 3
No 40
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=6.3e-33 Score=232.85 Aligned_cols=211 Identities=28% Similarity=0.417 Sum_probs=179.1
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHH-HHHHHhhcCce
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNS-VLLCSLRAGAG 97 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~ 97 (240)
....++|+++++|||||||.||+|.++|.++......... .+.+.++|+++..+|++|.+++.. .++.++..|++
T Consensus 178 ~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~ 253 (527)
T TIGR02275 178 PPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE----ICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGC 253 (527)
T ss_pred CCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh----hcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCe
Confidence 4567889999999999999999999999999887766554 345788999999999999988763 36788899999
Q ss_pred EEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccc
Q 039504 98 VLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYG 177 (240)
Q Consensus 98 ~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 177 (240)
+++.+.+++..+++.+++++++++.++|++++.+.+........++++|.+++||++++.++.+++.+.+ ++++++.||
T Consensus 254 ~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG 332 (527)
T TIGR02275 254 VVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQQVFG 332 (527)
T ss_pred EEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEEeeec
Confidence 9998889999999999999999999999999999888776667788999999999999999999999998 789999999
Q ss_pred ccccccchhhccCCCCCCCCCCCCcccccc-CCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 178 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVV-RNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 178 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
+||+....... .........++|+|+ ++..++|+| +++++++.|+.|||+|+|+.++
T Consensus 333 ~tE~~~~~~~~----~~~~~~~~~~~G~~~~~~~~v~i~d-~~g~~~~~g~~Gei~v~g~~~~ 390 (527)
T TIGR02275 333 MAEGLVNYTRL----DDPAEIIFTTQGRPMSPDDEVRVVD-DHGNPVAPGETGMLLTRGPYTF 390 (527)
T ss_pred cCccCccccCC----CCccccccccCCCCCCCCceEEEEC-CCCCCCCCCCceEEEecCCccc
Confidence 99965322111 111122346789999 488999999 6689999999999999999876
No 41
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-33 Score=239.15 Aligned_cols=212 Identities=22% Similarity=0.344 Sum_probs=173.3
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
.++++|+++++|||||||.||+|.++|.++.......... .++++++|++++..|+.|+.+....++.++..|++++
T Consensus 229 ~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v 305 (629)
T PRK10524 229 WLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDT---IFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATI 305 (629)
T ss_pred eeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHH---hcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEE
Confidence 3567899999999999999999999999875544332221 3467889999999999999887667889999999998
Q ss_pred Ecc----CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCC--CCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccc
Q 039504 100 LMQ----KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV--ADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILG 173 (240)
Q Consensus 100 ~~~----~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~ 173 (240)
+.+ ..++..++++++++++|++.++|++++.|.+.... ...+++++|.++++|+++++++.+++.+.+ +.+++
T Consensus 306 ~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~-~~~v~ 384 (629)
T PRK10524 306 MYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPTASWISEAL-GVPVI 384 (629)
T ss_pred EECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHHHHHHHHhc-CCCeE
Confidence 875 35789999999999999999999999998875432 334678999999999999999999999988 78999
Q ss_pred ccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCC
Q 039504 174 QGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGP 236 (240)
Q Consensus 174 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 236 (240)
+.||+||++..+..... .........+++|+|+|+++++|+|++++++++.|+.|||+|+||
T Consensus 385 ~~YG~TE~~~~~~~~~~-~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel~i~gp 446 (629)
T PRK10524 385 DNYWQTETGWPILAIAR-GVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVLVIEGP 446 (629)
T ss_pred eccccccccchhhcCCC-CcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEEEEcCC
Confidence 99999999843322211 111123346789999999999999965899999999999999998
No 42
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=4.3e-33 Score=240.19 Aligned_cols=206 Identities=23% Similarity=0.228 Sum_probs=171.1
Q ss_pred CCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEE
Q 039504 21 IEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL 100 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 100 (240)
..++++++|+|||||||.||+|+++|.+++........ .++++++|+++..+++.|+.+.+ .++.++..|+++++
T Consensus 353 ~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~----~~~l~~~d~~~~~~~l~w~~g~~-~v~~~L~~Gat~vl 427 (728)
T PLN03052 353 QPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWA----HLDIRKGDIVCWPTNLGWMMGPW-LVYASLLNGATLAL 427 (728)
T ss_pred cCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHH----hcCCCCCcEEEECCCcHHHhHHH-HHHHHHHhCCEEEE
Confidence 45689999999999999999999999987665544333 24678899999999999999886 67899999999998
Q ss_pred ccC-CCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccc
Q 039504 101 MQK-FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 101 ~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 179 (240)
.++ .++..++++++++++|++.++|++++.|.+.......+++++|.++++|++++++...++.+.++..++++.||+|
T Consensus 428 ~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~T 507 (728)
T PLN03052 428 YNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGT 507 (728)
T ss_pred eCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccCh
Confidence 864 5667899999999999999999999999887544566788999999999999999999888877446789999999
Q ss_pred ccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCC--CceEEEeCC
Q 039504 180 EAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQ--PGEICIRGP 236 (240)
Q Consensus 180 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~--~Gel~v~~~ 236 (240)
|+++.+.... .......+++|.|.++++++|+| ++|++++.|+ .|||+|+++
T Consensus 508 E~~~~~~~~~----~~~~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~ 561 (728)
T PLN03052 508 ELGGGFVTGS----LLQPQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELALFPL 561 (728)
T ss_pred hhCcccccCC----CCCCCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCC
Confidence 9976443321 11123457899999999999999 7799999985 599999864
No 43
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.2e-33 Score=234.62 Aligned_cols=227 Identities=31% Similarity=0.458 Sum_probs=183.3
Q ss_pred cchhhHhhcCCCCCCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccc-cCCcEEEEecchHHh
Q 039504 3 LHFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYL-TNGDVVLCVLPLFHI 81 (240)
Q Consensus 3 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~-~~~d~~l~~~p~~~~ 81 (240)
.++++++..............+++++++|||||||.||++.++|.++.......... +++ ..+++++...|++|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~ 228 (542)
T PRK07786 153 LGYEDLLAEAGPAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRT----NGADINSDVGFVGVPLFHI 228 (542)
T ss_pred cCHHHHhhccCCCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHh----cCCCCCCceEEEecchHHH
Confidence 345555544333333344566789999999999999999999999998777655442 233 567899999999999
Q ss_pred hhhHHHHHHHhhcCceEEEcc--CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHH
Q 039504 82 YSLNSVLLCSLRAGAGVLLMQ--KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKEL 159 (240)
Q Consensus 82 ~g~~~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~ 159 (240)
+|+. .++.++..|+++++.+ .+++..+++.++++++|++.++|++++.+.......... .++|.+++||+++++++
T Consensus 229 ~g~~-~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~ 306 (542)
T PRK07786 229 AGIG-SMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDTL 306 (542)
T ss_pred HHHH-HHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHHH
Confidence 8886 6788999999998864 579999999999999999999999999998875543333 36899999999999999
Q ss_pred HHHHHHhCCCCcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 160 EDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 160 ~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
++.+++.|++.++++.||+||++.+...+. .........++|+|++++.++|+| +++++++.|+.|||+|+|+.++
T Consensus 307 ~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~ 382 (542)
T PRK07786 307 LRQMAATFPEAQILAAFGQTEMSPVTCMLL---GEDAIRKLGSVGKVIPTVAARVVD-ENMNDVPVGEVGEIVYRAPTLM 382 (542)
T ss_pred HHHHHHHcCCCeEEeeecccccccceEecC---cccccccCCCccccCCCceEEEEC-CCCCCCcCCCceEEEEEChhhh
Confidence 999999998899999999999986654331 112223457899999999999999 6689999999999999999875
No 44
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=8.2e-33 Score=233.17 Aligned_cols=212 Identities=30% Similarity=0.429 Sum_probs=179.9
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....++|+++++|||||||.||++.++|.++......+.. .+++.++|+++..+|++|.+++...++.++..|+++
T Consensus 182 ~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~ 257 (547)
T PRK06087 182 ITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCA----RLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARS 257 (547)
T ss_pred CCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----hcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEE
Confidence 3456789999999999999999999999999877665544 446788999999999999999887788899999999
Q ss_pred EEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 99 LLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 99 v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
++.+.+++..+++.+++++++++.++|+.+..+++........++++|.+++||+++++++.+.+.+. ++++++.||+
T Consensus 258 ~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~~YG~ 335 (547)
T PRK06087 258 VLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLLSVYGS 335 (547)
T ss_pred EecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEEEecc
Confidence 99999999999999999999999999888888877766556677899999999999999999988774 8899999999
Q ss_pred cccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 179 TEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 179 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
||++.+..... .........++|+|++++.++|+| +++++++.|+.|||+|+|+.+++
T Consensus 336 TE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~ 393 (547)
T PRK06087 336 TESSPHAVVNL---DDPLSRFMHTDGYAAAGVEIKVVD-EARKTLPPGCEGEEASRGPNVFM 393 (547)
T ss_pred cccCCccccCC---CcchhhcCCcCCccCCCceEEEEc-CCCCCCcCCCcceEEEecccccc
Confidence 99987654431 111122345789999999999999 67899999999999999998763
No 45
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.9e-33 Score=274.19 Aligned_cols=215 Identities=20% Similarity=0.303 Sum_probs=184.3
Q ss_pred CCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 18 EVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
.....|+|+++|+|||||||.||||.++|+++.+.+..... .+++.++|+++..+|+.|..+.. .++.++..|++
T Consensus 3231 ~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~ 3305 (3956)
T PRK12467 3231 STRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAE----AYELDANDRVLLFMSFSFDGAQE-RFLWTLICGGC 3305 (3956)
T ss_pred cccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHH----hcCCCcCCEEEEecCccHhHHHH-HHHHHHhCCCE
Confidence 34567899999999999999999999999999998877766 45689999999999999998876 68899999999
Q ss_pred EEEccC--CCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccc
Q 039504 98 VLLMQK--FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQG 175 (240)
Q Consensus 98 ~v~~~~--~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 175 (240)
+++.+. +++..+++.++++++|++.++|++++.+.+... ...++++|.+++|||++++++.+++.+.+++++++|.
T Consensus 3306 l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~ 3383 (3956)
T PRK12467 3306 LVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG--GADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNG 3383 (3956)
T ss_pred EEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc--ccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeC
Confidence 998875 789999999999999999999999999987543 3356789999999999999999999999888899999
Q ss_pred ccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 176 YGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 176 yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
||+||++..+................++|+|++++++.|+| ++++++|.|++|||+|+|+.|++
T Consensus 3384 YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~vp~G~~GEL~i~G~~v~~ 3447 (3956)
T PRK12467 3384 YGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD-GQLNPVPVGVAGELYIGGVGLAR 3447 (3956)
T ss_pred cccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEEC-CCCCCCCCCCCceEEEcchhhhh
Confidence 99999987655432211111223446899999999999999 67999999999999999999874
No 46
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=3.5e-33 Score=235.63 Aligned_cols=210 Identities=27% Similarity=0.397 Sum_probs=169.7
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....++++++++|||||||.||+|.++|.++......... .+++.++|+.+..+|++|.+++ ..|.++
T Consensus 169 ~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~pl~~~~~~--------~~g~~~ 236 (552)
T PRK09274 169 ADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALRE----DYGIEPGEIDLPTFPLFALFGP--------ALGMTS 236 (552)
T ss_pred CCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHH----HhCCCCCceeeeccCHHHhhhh--------hhCCeE
Confidence 3456789999999999999999999999999887766655 4467889999999998876443 346666
Q ss_pred EEcc-------CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCC-CC
Q 039504 99 LLMQ-------KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVP-QA 170 (240)
Q Consensus 99 v~~~-------~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~-~~ 170 (240)
++.. .+++..+++.++++++|+++++|++++.|.+.......+++++|.+++||+++++++.+++++.|+ ++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~ 316 (552)
T PRK09274 237 VIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRAMLPPDA 316 (552)
T ss_pred EecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHHHcCCCc
Confidence 6643 468999999999999999999999999999876656667889999999999999999999999996 37
Q ss_pred cccccccccccccchhhccCCCC----CC-CCCCCCccccccCCceEEEeeCC--------CCCCCCCCCCceEEEeCCC
Q 039504 171 ILGQGYGMTEAGPVLSMCLGFAK----QP-FPTKSGSCGTVVRNAELKVIDPE--------TGASLPHNQPGEICIRGPQ 237 (240)
Q Consensus 171 ~i~~~yG~tE~~~~~~~~~~~~~----~~-~~~~~~~~G~~~~~~~v~i~d~~--------~~~~~~~g~~Gel~v~~~~ 237 (240)
++++.||+||++.++........ .. ......++|+|+|+++++|+|++ ++++++.|+.|||+|+||+
T Consensus 317 ~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~ 396 (552)
T PRK09274 317 EILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIVVAGPM 396 (552)
T ss_pred eEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCeeEEEEecCc
Confidence 99999999999865543211100 00 11123478999999999999953 4678999999999999998
Q ss_pred CCC
Q 039504 238 IMK 240 (240)
Q Consensus 238 ~~~ 240 (240)
+++
T Consensus 397 ~~~ 399 (552)
T PRK09274 397 VTR 399 (552)
T ss_pred ccc
Confidence 863
No 47
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=7.2e-33 Score=231.93 Aligned_cols=209 Identities=30% Similarity=0.415 Sum_probs=178.5
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++++++++|||||||.||++.++|.++......... .+.+.++|+++..+|++|.+++. .++.++..|++++
T Consensus 157 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~~~ 231 (515)
T TIGR03098 157 PVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVAT----YLENRPDDRLLAVLPLSFDYGFN-QLTTAFYVGATVV 231 (515)
T ss_pred CCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHH----HhCCCcccEEEEECchhhHhHHH-HHHHHHHcCCEEE
Confidence 345678999999999999999999999999877766554 34578899999999999999987 6789999999999
Q ss_pred EccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccc
Q 039504 100 LMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 100 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 179 (240)
+.+.++++.+++.++++++|++.++|+++..|.+.... ...+.++|.++++|+++++++.+.+++.+++..+++.||+|
T Consensus 232 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~t 310 (515)
T TIGR03098 232 LHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWP-ESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLT 310 (515)
T ss_pred EcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcccC-CCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccc
Confidence 99889999999999999999999999999998875322 23567899999999999999999999999888999999999
Q ss_pred ccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 180 EAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 180 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|++...... .......++++|+|+++++++|+| +++++++.|+.|||+++|+.++
T Consensus 311 E~~~~~~~~----~~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~ 365 (515)
T TIGR03098 311 EAFRSTYLP----PEEVDRRPDSIGKAIPNAEVLVLR-EDGSECAPGEEGELVHRGALVA 365 (515)
T ss_pred cccceEecc----cccccCCCCCcceecCCCEEEEEC-CCCCCCCCCCceEEEEcCchhh
Confidence 987543221 111234567899999999999999 6689999999999999998765
No 48
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-33 Score=242.50 Aligned_cols=209 Identities=24% Similarity=0.313 Sum_probs=175.5
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++++++++|||||||.||+|.++|.++......+... .+.+.++|+++...|++|.+++...++.++..|++++
T Consensus 141 ~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~---~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v 217 (705)
T PRK06060 141 PMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRK---ALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAV 217 (705)
T ss_pred CCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHH---hhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEE
Confidence 3567889999999999999999999999988776544321 2356888999999999998887656778899999998
Q ss_pred Ecc-CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 100 LMQ-KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 100 ~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
+.+ .+++..++..++++++|+++++|+++..+.+.... ..++++|.+++||+++++++.+++.+.|++.++++.||+
T Consensus 218 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~--~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~ 295 (705)
T PRK06060 218 INSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSP--DSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGS 295 (705)
T ss_pred EeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhccc--ccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeec
Confidence 876 58889999999999999999999999999875432 356789999999999999999999999977899999999
Q ss_pred cccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 179 TEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 179 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
||++..+..+. ......+++|+|.++++++|+| +++++++.|+.|||+|+|++++
T Consensus 296 tE~~~~~~~~~-----~~~~~~~~iG~p~~~~~v~i~d-~~g~~~~~g~~GEl~i~g~~v~ 350 (705)
T PRK06060 296 TEVGQTFVSNR-----VDEWRLGTLGRVLPPYEIRVVA-PDGTTAGPGVEGDLWVRGPAIA 350 (705)
T ss_pred cccCceEEecc-----CCCCCcCcccccCCCcEEEEEC-CCCCCCCCCCceEEEEccchhh
Confidence 99975543321 1123456899999999999999 5689999999999999999876
No 49
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.2e-32 Score=231.62 Aligned_cols=212 Identities=27% Similarity=0.366 Sum_probs=177.7
Q ss_pred CCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHH-HHHHHhhcCc
Q 039504 18 EVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNS-VLLCSLRAGA 96 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~ 96 (240)
.....++++++++|||||||.||+|.++|.++......... .++++++|++++.+|++|.+++.. ..+.++..|+
T Consensus 176 ~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~----~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~ 251 (536)
T PRK10946 176 ATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE----ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGG 251 (536)
T ss_pred cCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHH----hcCCCCCceEEEecCccccccchhhhHHHHhhcCc
Confidence 34556789999999999999999999999999888876655 446788999999999999888753 4678899999
Q ss_pred eEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCC--CCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccc
Q 039504 97 GVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNP--MVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQ 174 (240)
Q Consensus 97 ~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~--~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~ 174 (240)
++++.+.+++..+++++++++++++.++|.+++.+.+.. ......++++|.+++||+++++++.+++.+.+ ++++++
T Consensus 252 ~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~~~ 330 (536)
T PRK10946 252 TVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL-GCQLQQ 330 (536)
T ss_pred EEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc-CCeEEE
Confidence 999988899999999999999999999999999998763 22334567899999999999999999999988 899999
Q ss_pred cccccccccchhhccCCCCCCCCCCCCcccccc-CCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 175 GYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVV-RNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 175 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
.||+||+..... .. .........++|+|+ |++.++|+| +++++++.|+.|||+|+|+.++
T Consensus 331 ~YG~tE~~~~~~-~~---~~~~~~~~~~~G~p~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~ 391 (536)
T PRK10946 331 VFGMAEGLVNYT-RL---DDSDERIFTTQGRPMSPDDEVWVAD-ADGNPLPQGEVGRLMTRGPYTF 391 (536)
T ss_pred eecccccceeee-cC---CCccccccccCCcccCCCceEEEEC-CCCCCCCCCCccEEEEecCccc
Confidence 999999653322 11 111223457889998 799999999 6789999999999999999876
No 50
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=2e-32 Score=228.90 Aligned_cols=211 Identities=28% Similarity=0.443 Sum_probs=176.5
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....++++++++|||||||.||+|.++|.++......... ..++++++|+++...|++|..++...++.++..|+++
T Consensus 156 ~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~ 232 (508)
T TIGR02262 156 AATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYAR---NTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATT 232 (508)
T ss_pred CCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhH---HhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceE
Confidence 3455789999999999999999999999999876654221 1346789999999999999999876677888899888
Q ss_pred EEcc-CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccc
Q 039504 99 LLMQ-KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYG 177 (240)
Q Consensus 99 v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 177 (240)
++.+ .+++..+++.+++++++++.++|+++..+............++|.++++|+++++++++.|++.| ++++++.||
T Consensus 233 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~v~~~YG 311 (508)
T TIGR02262 233 VLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARF-GVDIVDGIG 311 (508)
T ss_pred EEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHh-CCchhhCcc
Confidence 8765 47899999999999999999999999888766443334556899999999999999999999998 789999999
Q ss_pred ccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 178 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 178 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
+||++.+...+. ......+.+|+|.+++.++|+| +++++++.|+.|||+|+|+.++
T Consensus 312 ~tE~~~~~~~~~-----~~~~~~~~~G~~~~g~~v~i~d-~~~~~~~~g~~Gel~i~~~~~~ 367 (508)
T TIGR02262 312 STEMLHIFLSNL-----PGDVRYGTSGKPVPGYRLRLVG-DGGQDVAAGEPGELLISGPSSA 367 (508)
T ss_pred ccccCceeecCC-----ccCCCCCCcCCCCCCcEEEEEC-CCCCCCCCCCeeEEEEecCccc
Confidence 999986544331 1123356889999999999999 8899999999999999998764
No 51
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.6e-33 Score=235.01 Aligned_cols=216 Identities=22% Similarity=0.322 Sum_probs=167.5
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCcccc-CCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLT-NGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~-~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
...++|+++++|||||||.||+|.++|.++......... .+++. ++|++++.+|++|.+++. .++.++..|+++
T Consensus 148 ~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~----~~~~~~~~d~~l~~~pl~h~~g~~-~~~~~l~~G~~~ 222 (525)
T PRK05851 148 PPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNA----RVGLDAATDVGCSWLPLYHDMGLA-FLLTAALAGAPL 222 (525)
T ss_pred CCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHH----HhCCCCCCCeEEEcCCCccCccHH-HHHHHHHcCCeE
Confidence 346789999999999999999999999999888776655 34566 899999999999999997 578899999999
Q ss_pred EEccC--C--CHHHHHHHHHhccceeeeechHHHHHHHhCCC-CCCCCccchhhhhccCCCCCHHHHHHHHHh---C--C
Q 039504 99 LLMQK--F--EIGALLELIQRHRVSVAAVVPPLVLALAKNPM-VADYDLSSIRVVLSGAAPLGKELEDALRSR---V--P 168 (240)
Q Consensus 99 v~~~~--~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~-~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~---~--~ 168 (240)
++.+. + ++..+++.+++++++++...|.++..+.+... .....++++|.+++||+++++++.+++.+. + +
T Consensus 223 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~ 302 (525)
T PRK05851 223 WLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFD 302 (525)
T ss_pred EEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCC
Confidence 98763 3 67889999999999987554444444443322 223457889999999999999999998875 3 2
Q ss_pred CCcccccccccccccchhhccCCC----------CCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCC
Q 039504 169 QAILGQGYGMTEAGPVLSMCLGFA----------KQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQI 238 (240)
Q Consensus 169 ~~~i~~~yG~tE~~~~~~~~~~~~----------~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~ 238 (240)
..++++.||+||++..+....... .........++|+|+|+++++|+|++.+.+++.|+.|||+|+|+++
T Consensus 303 ~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~ 382 (525)
T PRK05851 303 AGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGASM 382 (525)
T ss_pred hhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecCch
Confidence 246999999999976544321000 0001123457999999999999997666779999999999999988
Q ss_pred CC
Q 039504 239 MK 240 (240)
Q Consensus 239 ~~ 240 (240)
++
T Consensus 383 ~~ 384 (525)
T PRK05851 383 MS 384 (525)
T ss_pred hh
Confidence 63
No 52
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-32 Score=230.65 Aligned_cols=212 Identities=29% Similarity=0.510 Sum_probs=173.1
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCcccc-CCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLT-NGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~-~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
....++|+++++|||||||.||+|.++|.++..........+. ..+. ..+++++.+|++|.+++...++..+..|..
T Consensus 202 ~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~ 279 (562)
T PRK05677 202 ANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMG--SNLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNH 279 (562)
T ss_pred CCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhc--cCCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCe
Confidence 3456789999999999999999999999998776544332111 1223 346888999999999987567777888877
Q ss_pred EEEcc-CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccc
Q 039504 98 VLLMQ-KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGY 176 (240)
Q Consensus 98 ~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 176 (240)
.++.+ +.++..+++.++++++|++.++|+++..+..........++++|.+++||+++++++.+++++.+ ++++++.|
T Consensus 280 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~-~~~v~~~Y 358 (562)
T PRK05677 280 NILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGMALQLATAERWKEVT-GCAICEGY 358 (562)
T ss_pred EEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCccCCHHHHHHHHHHc-CCCeeccC
Confidence 66554 57899999999999999999999999999886654555667899999999999999999999988 78999999
Q ss_pred cccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 177 GMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 177 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|+||++.++.... .....++++|+|+|++.++|+| +++++++.|+.|||+|+||.++
T Consensus 359 G~tE~~~~~~~~~-----~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~ 415 (562)
T PRK05677 359 GMTETSPVVSVNP-----SQAIQVGTIGIPVPSTLCKVID-DDGNELPLGEVGELCVKGPQVM 415 (562)
T ss_pred CccccCcceeecC-----ccCCCCCccCccCCCCEEEEEC-CCCCCCCCCCCeEEEEecCccc
Confidence 9999886654431 1123456899999999999999 5689999999999999999876
No 53
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-32 Score=231.05 Aligned_cols=212 Identities=29% Similarity=0.518 Sum_probs=181.8
Q ss_pred CCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEE
Q 039504 21 IEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL 100 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 100 (240)
..++++++++|||||||.||+|.++|.++......... .+++.++|+++...|++|.+|....++.++..|+++++
T Consensus 198 ~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~ 273 (558)
T PRK12583 198 LDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAE----SLGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVY 273 (558)
T ss_pred cCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHH----HhCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEe
Confidence 45788999999999999999999999999877766554 34678899999999999999998788899999999986
Q ss_pred c-cCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccc
Q 039504 101 M-QKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 101 ~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 179 (240)
. ..+++..+++.++++++|++.++|+++..+..........++++|.++++|+++++++.+++.+.++...+++.||+|
T Consensus 274 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~t 353 (558)
T PRK12583 274 PNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMT 353 (558)
T ss_pred ecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCHHHHHHHHHHcCCcceecccccc
Confidence 5 458999999999999999999999999988877665566788999999999999999999999998667899999999
Q ss_pred ccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 180 EAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 180 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|++.++..+... ........++|+|.|++.++|+|++ +++++.|+.|||+|+|+.++
T Consensus 354 E~~~~~~~~~~~--~~~~~~~~~vG~p~~~~~~~i~d~~-~~~~~~g~~Gel~v~g~~~~ 410 (558)
T PRK12583 354 ETSPVSLQTTAA--DDLERRVETVGRTQPHLEVKVVDPD-GATVPRGEIGELCTRGYSVM 410 (558)
T ss_pred ccccceeccCcc--cccccccCCCCccCCCCeEEEECCC-CCCCCCCCeeEEEEEeCccc
Confidence 999766543211 1122345789999999999999966 89999999999999998765
No 54
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.1e-32 Score=268.89 Aligned_cols=216 Identities=24% Similarity=0.298 Sum_probs=182.4
Q ss_pred CCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 18 EVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
.....++++++|+|||||||.||||.++|.++.+.+..... .+++.++|+++...|+.|..+++ .++.++..|++
T Consensus 1712 ~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~ 1786 (3956)
T PRK12467 1712 AVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQE----AYQLSAADVVLQFTSFAFDVSVW-ELFWPLINGAR 1786 (3956)
T ss_pred CCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHH----hcCCCcccEEEEecCccHHHHHH-HHHHHHhCCCE
Confidence 34567899999999999999999999999999888877665 45678999999999999998887 67889999999
Q ss_pred EEEccC---CCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccc
Q 039504 98 VLLMQK---FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQ 174 (240)
Q Consensus 98 ~v~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~ 174 (240)
+++.++ .++..+++.++++++|++.++|++++.|.+... ....++++|.+++|||++++++.+.+.+.+++.+++|
T Consensus 1787 lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 1865 (3956)
T PRK12467 1787 LVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFN 1865 (3956)
T ss_pred EEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEe
Confidence 988763 689999999999999999999999999987532 2345678999999999999999999999887788999
Q ss_pred cccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 175 GYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 175 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
.||+||++..+................++|+|++++.+.|+| ++++++|.|++|||+|+|+++++
T Consensus 1866 ~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~vp~G~~GEl~i~G~~v~~ 1930 (3956)
T PRK12467 1866 LYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILD-ASLNPVPIGVAGELYLGGVGLAR 1930 (3956)
T ss_pred CccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEeccccccc
Confidence 999999986554332211111222356899999999999999 77999999999999999999874
No 55
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=5.2e-32 Score=225.07 Aligned_cols=208 Identities=31% Similarity=0.445 Sum_probs=175.0
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....++++++++|||||||.||+|.++|.++...+..... .++++++|+++..+|++|++++. .++.++..|+++
T Consensus 136 ~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~g~~-~~~~~l~~G~~~ 210 (483)
T PRK03640 136 EEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSAL----NLGLTEDDCWLAAVPIFHISGLS-ILMRSVIYGMRV 210 (483)
T ss_pred CCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHH----hcCCCcCcEEEEecCHHHHHHHH-HHHHHHhcCCEE
Confidence 3456789999999999999999999999998776655444 34678999999999999999987 578888999999
Q ss_pred EEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 99 LLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 99 v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
++.+..++..+++.++++++|++.++|+++..|.+..... ....++|.++++|+++++.+.+.+++. ++++++.||+
T Consensus 211 ~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~ 287 (483)
T PRK03640 211 VLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGM 287 (483)
T ss_pred EecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeeecc
Confidence 9999999999999999999999999999999998765433 234689999999999999999988874 7899999999
Q ss_pred cccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 179 TEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 179 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
||.+..+.... ........+++|+|.++++++|+| + +++++.|+.|||+|+||.++
T Consensus 288 tE~~~~~~~~~---~~~~~~~~~~vG~p~~~~~~~i~~-~-~~~~~~g~~Gel~v~g~~~~ 343 (483)
T PRK03640 288 TETASQIVTLS---PEDALTKLGSAGKPLFPCELKIEK-D-GVVVPPFEEGEIVVKGPNVT 343 (483)
T ss_pred CcccccccccC---cccccccCCCcccccCCcEEEEec-C-CCcCCCCCceEEEEECcchh
Confidence 99875433321 111234567899999999999998 4 48899999999999999876
No 56
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-32 Score=226.02 Aligned_cols=206 Identities=29% Similarity=0.426 Sum_probs=175.6
Q ss_pred CCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEE
Q 039504 21 IEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL 100 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 100 (240)
..++|+++++|||||||.||+|.++|.++......... .+++.++|+++..+|++|..|+...++.++..|++++.
T Consensus 125 ~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~ 200 (471)
T PRK07787 125 PDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAE----AWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVH 200 (471)
T ss_pred CCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHH----hcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEe
Confidence 45789999999999999999999999999888766655 44578899999999999999998778999999999999
Q ss_pred ccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccc
Q 039504 101 MQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTE 180 (240)
Q Consensus 101 ~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE 180 (240)
.+..++..+++.++ ++++++.++|+++..+.+.... ...++++|.++.||+++++++++++++.+ +.++++.||+||
T Consensus 201 ~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~-~~~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE 277 (471)
T PRK07787 201 TGRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEA-ARALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERYGMTE 277 (471)
T ss_pred cCCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccc-cccccceeEEEECCCCCCHHHHHHHHHHc-CCCeecccCccc
Confidence 98899999999999 9999999999999999875432 23567899999999999999999999988 789999999999
Q ss_pred cccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCC-CCC-CceEEEeCCCCC
Q 039504 181 AGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLP-HNQ-PGEICIRGPQIM 239 (240)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~-~g~-~Gel~v~~~~~~ 239 (240)
++...... ........++|+|.+++.++|+| +++++++ .|+ .|||+|+|+.++
T Consensus 278 ~~~~~~~~-----~~~~~~~~~vG~~~~g~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~ 332 (471)
T PRK07787 278 TLITLSTR-----ADGERRPGWVGLPLAGVETRLVD-EDGGPVPHDGETVGELQVRGPTLF 332 (471)
T ss_pred cCcceecC-----CCCcccCCcccccCCCcEEEEEC-CCCCCCCCCCCCceEEEEECcccc
Confidence 97644332 11233456899999999999999 4578887 454 899999999875
No 57
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.1e-32 Score=237.42 Aligned_cols=227 Identities=26% Similarity=0.358 Sum_probs=167.2
Q ss_pred chhhHhhcCCC-CCCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhh
Q 039504 4 HFTVLSEADED-QIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIY 82 (240)
Q Consensus 4 ~~~~l~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~ 82 (240)
+|+++.+.... ........++|+++|+|||||||.||||.++|+++...+....... ..+.++|++++++|++|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~---~~~~~~d~~l~~lPl~Hi~ 305 (696)
T PLN02387 229 SFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVV---PKLGKNDVYLAYLPLAHIL 305 (696)
T ss_pred EHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhc---CCCCCCCEEEEECcHHHHH
Confidence 45555543322 1122345689999999999999999999999999988776654321 2467899999999999999
Q ss_pred hhHHHHHHHhhcCceEEEccCCC--------HHHHHHHHHhccceeeeechHHHHHHHhCCCCC----------------
Q 039504 83 SLNSVLLCSLRAGAGVLLMQKFE--------IGALLELIQRHRVSVAAVVPPLVLALAKNPMVA---------------- 138 (240)
Q Consensus 83 g~~~~~~~~l~~G~~~v~~~~~~--------~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~---------------- 138 (240)
++. ....++..|+.+.+..... +..++..++++++|++.++|.+++.+.+.....
T Consensus 306 ~~~-~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~~a~ 384 (696)
T PLN02387 306 ELA-AESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGGLAKKLFDIAY 384 (696)
T ss_pred HHH-HHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 987 3444566777776643311 234567889999999999999999886531100
Q ss_pred --------CC----------------------Cc-cchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccccccchhh
Q 039504 139 --------DY----------------------DL-SSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSM 187 (240)
Q Consensus 139 --------~~----------------------~~-~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~ 187 (240)
+. .+ .++|.+++||+++++++.+.++..+ ++.+++.||+||++..++.
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~-g~~v~~~YG~TEt~~~~~~ 463 (696)
T PLN02387 385 KRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICL-GAPIGQGYGLTETCAGATF 463 (696)
T ss_pred HHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHc-CCCeeEeechhhcccceee
Confidence 00 01 4789999999999999998888888 7899999999999865544
Q ss_pred ccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCC---CCCCCceEEEeCCCCCC
Q 039504 188 CLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASL---PHNQPGEICIRGPQIMK 240 (240)
Q Consensus 188 ~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~---~~g~~Gel~v~~~~~~~ 240 (240)
.. ..+...+++|+|.|+++++|+|++++... ++++.|||+|+||.+|+
T Consensus 464 ~~-----~~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~ 514 (696)
T PLN02387 464 SE-----WDDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTL 514 (696)
T ss_pred cC-----cccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccc
Confidence 31 12334678999999999999995444332 34457999999999874
No 58
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.9e-32 Score=227.11 Aligned_cols=231 Identities=24% Similarity=0.392 Sum_probs=179.6
Q ss_pred chhhHhhcCCCCCCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhh
Q 039504 4 HFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYS 83 (240)
Q Consensus 4 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g 83 (240)
.++++.....+........++++++++|||||||.||+|.++|.++........ ....++++++|+++...|++|..+
T Consensus 156 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~~d~~l~~~p~~h~~~ 233 (539)
T PRK07008 156 CYETLVGAQDGDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAA--LPDAMGLSARDAVLPVVPMFHVNA 233 (539)
T ss_pred cHHHHhcccCCCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhh--cccccCCCCCceEEecCchHHhhh
Confidence 344554443333333456678899999999999999999999999864332111 111456788999999999999887
Q ss_pred hHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHH
Q 039504 84 LNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDA 162 (240)
Q Consensus 84 ~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~ 162 (240)
+. ..+.++..|+++++.+ .+++..+++.++++++|++..+|+++..+.+........++++|.++++|+++++++.++
T Consensus 234 ~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~ 312 (539)
T PRK07008 234 WG-LPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRT 312 (539)
T ss_pred HH-HHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHH
Confidence 75 5677788999988864 589999999999999999999999999999877666667889999999999999999999
Q ss_pred HHHhCCCCcccccccccccccchhhccCCCCC------CCCCCCCccccccCCceEEEeeCCCCCCCCCC--CCceEEEe
Q 039504 163 LRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQ------PFPTKSGSCGTVVRNAELKVIDPETGASLPHN--QPGEICIR 234 (240)
Q Consensus 163 ~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~------~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g--~~Gel~v~ 234 (240)
+.+.+ +.++++.||+||++..+..+...... .......++|+|+|++.++|+| +++++++.+ +.|||+++
T Consensus 313 ~~~~~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~ 390 (539)
T PRK07008 313 FEDEY-GVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVR 390 (539)
T ss_pred HHHHh-CCceecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEEC-CCCCccCCCCCcceEEEEe
Confidence 99988 78999999999998654433111000 0011245789999999999999 568888754 57999999
Q ss_pred CCCCC
Q 039504 235 GPQIM 239 (240)
Q Consensus 235 ~~~~~ 239 (240)
|+.++
T Consensus 391 g~~~~ 395 (539)
T PRK07008 391 GPWVI 395 (539)
T ss_pred CCccc
Confidence 98865
No 59
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-32 Score=235.38 Aligned_cols=216 Identities=27% Similarity=0.373 Sum_probs=170.0
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++|+++++|||||||.||+|.++|+++......... .+++.++|+++..+|++|.+|+.. .+.+++.|++++
T Consensus 176 ~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~Pl~h~~gl~~-~~~~~~~G~~~~ 250 (631)
T PRK07769 176 EANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVID----ALEGQEGDRGVSWLPFFHDMGLIT-VLLPALLGHYIT 250 (631)
T ss_pred CCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHH----HcCCCCcceEEEeCCCcCchhhHH-HHHHHhhCCeEE
Confidence 356789999999999999999999999999877766554 345788999999999999999974 455566788887
Q ss_pred EccC--C--CHHHHHHHHHhccc---eeeeechHHHHHHHhCC--CC---CCCCccchhhhhccCCCCCHHHHHHHHHhC
Q 039504 100 LMQK--F--EIGALLELIQRHRV---SVAAVVPPLVLALAKNP--MV---ADYDLSSIRVVLSGAAPLGKELEDALRSRV 167 (240)
Q Consensus 100 ~~~~--~--~~~~~~~~i~~~~~---t~l~~~p~~~~~l~~~~--~~---~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~ 167 (240)
+..+ + ++..+++.+.++++ +++..+|.++..+.... .. ...+++++|.+++||+++++++.+++.+.|
T Consensus 251 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~ 330 (631)
T PRK07769 251 FMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPASMRKFNEAF 330 (631)
T ss_pred EEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCCCHHHHHHHHHHH
Confidence 7643 4 89999999999886 78899999887766421 11 134678999999999999999999999987
Q ss_pred C-----CCcccccccccccccchhhccCCCCC----------------------CCCCCCCccccccCCceEEEeeCCCC
Q 039504 168 P-----QAILGQGYGMTEAGPVLSMCLGFAKQ----------------------PFPTKSGSCGTVVRNAELKVIDPETG 220 (240)
Q Consensus 168 ~-----~~~i~~~yG~tE~~~~~~~~~~~~~~----------------------~~~~~~~~~G~~~~~~~v~i~d~~~~ 220 (240)
+ ...+++.||+||++..+......... .......++|+|.++..++|+|++++
T Consensus 331 ~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g 410 (631)
T PRK07769 331 APYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETA 410 (631)
T ss_pred hhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCC
Confidence 2 24699999999987655432110000 00011247899999999999998889
Q ss_pred CCCCCCCCceEEEeCCCCCC
Q 039504 221 ASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 221 ~~~~~g~~Gel~v~~~~~~~ 240 (240)
++++.|+.|||+|+||++++
T Consensus 411 ~~~~~ge~GEl~v~gp~v~~ 430 (631)
T PRK07769 411 SELPDGQIGEIWLHGNNIGT 430 (631)
T ss_pred cCCCCCCEEEEEecCCCccc
Confidence 99999999999999999874
No 60
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-31 Score=226.25 Aligned_cols=210 Identities=36% Similarity=0.623 Sum_probs=174.1
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccc-cCCcEEEEecchHHhhhhHHHHHHHhhcCceEEE
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYL-TNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL 100 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~-~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 100 (240)
.++++++++|||||||.||+|.++|.++.......... .... ...+++++.+|++|.+++...+..++..|..+++
T Consensus 204 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~ 280 (563)
T PRK06710 204 PENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQW---LYNCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVL 280 (563)
T ss_pred CCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhh---ccCCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEE
Confidence 35789999999999999999999999987554332221 1123 3346788999999999887566778899999999
Q ss_pred ccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccc
Q 039504 101 MQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTE 180 (240)
Q Consensus 101 ~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE 180 (240)
.+++++..+++.++++++|++.++|++++.+..........++++|.+++||+++++++.+++.+.+ +.++++.||+||
T Consensus 281 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE 359 (563)
T PRK06710 281 IPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPLPVEVQEKFETVT-GGKLVEGYGLTE 359 (563)
T ss_pred cCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcCCHHHHHHHHHhh-CCCEeccccccc
Confidence 8889999999999999999999999999999886555555678999999999999999999999988 788999999999
Q ss_pred cccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 181 AGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
++........ .....++++|++.+++.++|+|++++++++.|+.|||+|+|+.++
T Consensus 360 ~~~~~~~~~~----~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~~~ 414 (563)
T PRK06710 360 SSPVTHSNFL----WEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQIM 414 (563)
T ss_pred CccccccCcc----cccccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCccc
Confidence 9865433211 112335689999999999999988899999999999999999875
No 61
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.4e-32 Score=270.13 Aligned_cols=216 Identities=25% Similarity=0.323 Sum_probs=184.8
Q ss_pred CCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 18 EVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
.....|+++++++|||||||.||||.++|+++......... .+++.++|+++..+|++|..+.+ .++.++..|++
T Consensus 4688 ~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~ 4762 (5163)
T PRK12316 4688 AVRLHPDNLAYVIYTSGSTGRPKGVAVSHGSLVNHLHATGE----RYELTPDDRVLQFMSFSFDGSHE-GLYHPLINGAS 4762 (5163)
T ss_pred ccCCCCCceEEEEECCCCCCCCCEeeeccHHHHHHHHHHHH----hcCCCcCCeEEEecCcchhhHHH-HHHHHHhCCCE
Confidence 34567899999999999999999999999999888877665 45688999999999999998877 68889999999
Q ss_pred EEEccC--CCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccc
Q 039504 98 VLLMQK--FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQG 175 (240)
Q Consensus 98 ~v~~~~--~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 175 (240)
+++.+. +++..+++.++++++|++.++|++++.|.+...... .++++|.+++|||++++++.+++.+.+++++++|.
T Consensus 4763 lvi~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~-~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 4841 (5163)
T PRK12316 4763 VVIRDDSLWDPERLYAEIHEHRVTVLVFPPVYLQQLAEHAERDG-EPPSLRVYCFGGEAVAQASYDLAWRALKPVYLFNG 4841 (5163)
T ss_pred EEEcCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhhhcccc-CCCCccEEEEecccCCHHHHHHHHHhCCCCEEEec
Confidence 998764 389999999999999999999999999987654433 67899999999999999999999888878999999
Q ss_pred ccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 176 YGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 176 yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
||+||++..+................++|+|++++.++|+| ++++++|.|++|||+|+||++++
T Consensus 4842 YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~p~g~~GEl~i~G~~v~~ 4905 (5163)
T PRK12316 4842 YGPTETTVTVLLWKARDGDACGAAYMPIGTPLGNRSGYVLD-GQLNPLPVGVAGELYLGGEGVAR 4905 (5163)
T ss_pred ccCccceEEEEEEEcccccccCCCCCcccccccCCEEEEEC-CCCCcCCCCCCceEEECCcccch
Confidence 99999987655443222122234557899999999999999 77999999999999999999874
No 62
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-32 Score=234.79 Aligned_cols=216 Identities=25% Similarity=0.409 Sum_probs=165.0
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCcc-ccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLY-LTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
...++|+++++|||||||.||+|.++|+++......... .+. +.+++++++.+|++|..|+...++.++..|.++
T Consensus 189 ~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~gg~~~ 264 (612)
T PRK12476 189 ELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMIL----SIDLLDRNTHGVSWLPLYHDMGLSMIGFPAVYGGHST 264 (612)
T ss_pred CCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHH----HhccCCCCceEEEeCCcccccchHHHHHHHhcCCeEE
Confidence 456789999999999999999999999999876655443 234 577899999999999999875555556555555
Q ss_pred EEcc-CC--CHHHHHHHHH--hccceeeeechHHHHHHHhCCC----CCCCCccchhhhhccCCCCCHHHHHHHHHhCC-
Q 039504 99 LLMQ-KF--EIGALLELIQ--RHRVSVAAVVPPLVLALAKNPM----VADYDLSSIRVVLSGAAPLGKELEDALRSRVP- 168 (240)
Q Consensus 99 v~~~-~~--~~~~~~~~i~--~~~~t~l~~~p~~~~~l~~~~~----~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~- 168 (240)
++.+ .+ ++..+++.++ +++++++..+|+++..+..... ....+++++| +++||+++++++.+++++.|+
T Consensus 265 ~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~~~~~~~~~~~ 343 (612)
T PRK12476 265 LMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDAVTTFNKAFAP 343 (612)
T ss_pred EECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHHHHHHHHHHHHh
Confidence 5543 23 8899999995 4899999999998887766421 1234677899 999999999999999999872
Q ss_pred ----CCcccccccccccccchhhccCCCC----------------------CCCCCCCCccccccCCceEEEeeCCCCCC
Q 039504 169 ----QAILGQGYGMTEAGPVLSMCLGFAK----------------------QPFPTKSGSCGTVVRNAELKVIDPETGAS 222 (240)
Q Consensus 169 ----~~~i~~~yG~tE~~~~~~~~~~~~~----------------------~~~~~~~~~~G~~~~~~~v~i~d~~~~~~ 222 (240)
..++++.||+||++..+........ ........++|+|.|+++++|+|++++++
T Consensus 344 ~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~~g~~ 423 (612)
T PRK12476 344 YGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDPDTGAE 423 (612)
T ss_pred cCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeCCCCcC
Confidence 3469999999998755432210000 00001124789999999999999766999
Q ss_pred CCCCCCceEEEeCCCCCC
Q 039504 223 LPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 223 ~~~g~~Gel~v~~~~~~~ 240 (240)
+|.|+.|||+|+|+++++
T Consensus 424 ~~~g~~GEl~v~g~~v~~ 441 (612)
T PRK12476 424 LPDGEVGEIWLHGDNIGR 441 (612)
T ss_pred CCCCCEEEEEEcCCcccc
Confidence 999999999999999874
No 63
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=3.8e-32 Score=248.76 Aligned_cols=213 Identities=23% Similarity=0.322 Sum_probs=179.2
Q ss_pred CCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEE
Q 039504 21 IEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL 100 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 100 (240)
..++++++++|||||||.||+|.++|+++.+...+... .+++.++|+++...|++|..+++ .++.++..|+++++
T Consensus 595 ~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~~~~-~~~~~l~~G~~l~~ 669 (1296)
T PRK10252 595 SQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQN----HYPLTADDVVLQKTPCSFDVSVW-EFFWPFIAGAKLVM 669 (1296)
T ss_pred CCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHH----hcCCCCCCEEEEeCCcchhhhHH-HHHHHHhCCCEEEE
Confidence 36789999999999999999999999999988877665 45688999999999999988877 67889999999998
Q ss_pred cc---CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCC--CCccchhhhhccCCCCCHHHHHHHHHhCCCCccccc
Q 039504 101 MQ---KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVAD--YDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQG 175 (240)
Q Consensus 101 ~~---~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~--~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 175 (240)
.+ ..++..+++.++++++|++.++|+++..+.+...... ..+.++|.+++|||++++++.+++.+.+ +++++|.
T Consensus 670 ~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-~~~l~n~ 748 (1296)
T PRK10252 670 AEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLT-GAPLHNL 748 (1296)
T ss_pred CChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcC-CCEEEeC
Confidence 75 3689999999999999999999999998887643322 3457899999999999999999999987 7899999
Q ss_pred ccccccccchhhccCCCCC--CCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 176 YGMTEAGPVLSMCLGFAKQ--PFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 176 yG~tE~~~~~~~~~~~~~~--~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
||+||++..+......... .......++|+|.+++.+.|+| +.++++|.|+.|||+|+|+.+++
T Consensus 749 YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g~~Gel~i~g~~~~~ 814 (1296)
T PRK10252 749 YGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARMRPVPPGVAGDLYLTGIQLAQ 814 (1296)
T ss_pred CCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecccccch
Confidence 9999998655543221111 0123346799999999999999 77999999999999999998864
No 64
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=8e-32 Score=224.99 Aligned_cols=214 Identities=25% Similarity=0.322 Sum_probs=178.8
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...+++.++++|||||||.||++.++|.++......... .++...+++++...|++|..++. .++.++..|++++
T Consensus 137 ~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~~~~-~~~~~l~~G~~~~ 211 (502)
T TIGR01734 137 AVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLA----DFPLSEGKQFLNQAPFSFDLSVM-DLYPCLASGGTLH 211 (502)
T ss_pred cCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHH----hCCCCCCceEEeecCceechhHH-HHHHHHHCCCEEE
Confidence 356788999999999999999999999999887776655 34678899999999999988886 6788999999998
Q ss_pred EccC---CCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccc
Q 039504 100 LMQK---FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGY 176 (240)
Q Consensus 100 ~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 176 (240)
+.++ .++..+++.+++++++.+..+|+++..+..........++++|.++++|+++++++.+++.+.+++.++++.|
T Consensus 212 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~y 291 (502)
T TIGR01734 212 CLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTY 291 (502)
T ss_pred EcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCc
Confidence 8764 6889999999999999999999999887765444455678999999999999999999999999889999999
Q ss_pred cccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 177 GMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 177 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|+||++..+................++|++.|+++++|+| +++++++.|+.|||+|+|+.++
T Consensus 292 G~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~ 353 (502)
T TIGR01734 292 GPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMD-EEGEPLPEGEKGEIVIVGPSVS 353 (502)
T ss_pred cCCcceEEEEEEEccccccccCCccccccccCCCEEEEEC-CCCCCCCCCCeeEEEEcccccc
Confidence 9999875433321111111233445799999999999999 5589999999999999999876
No 65
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=4.3e-32 Score=235.01 Aligned_cols=204 Identities=30% Similarity=0.527 Sum_probs=171.2
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++|+++++|||||||.||+|.++|.++......... .+++.++|++++.+|++|.+++...++.++..|++++
T Consensus 361 ~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv 436 (718)
T PRK08043 361 KQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT----IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVF 436 (718)
T ss_pred CCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH----hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEE
Confidence 346789999999999999999999999999887766554 3467899999999999999998767889999999999
Q ss_pred EccC-CCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 100 LMQK-FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 100 ~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
+.+. +++..+++.+.++++|++.++|+++..+.+.. ...+++++|.+++||+++++++.+.+++.| ++++++.||+
T Consensus 437 ~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~l~~~YG~ 513 (718)
T PRK08043 437 LYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKF-GLRILEGYGV 513 (718)
T ss_pred EeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHc-CCCeecccCc
Confidence 8764 67788899999999999999999998876642 234567899999999999999999999998 7899999999
Q ss_pred cccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 179 TEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 179 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
||++..+.... ......+++|+|.|+++++|+|.+ + .++.|||+|+|+++++
T Consensus 514 TE~~~~~~~~~-----~~~~~~~svG~p~pg~~~~i~d~~-~----~~~~Gel~v~g~~v~~ 565 (718)
T PRK08043 514 TECAPVVSINV-----PMAAKPGTVGRILPGMDARLLSVP-G----IEQGGRLQLKGPNIMN 565 (718)
T ss_pred ccccceEEecC-----CcccCCCCCCCcCCCCeeEEecCC-C----CCCceEEEEecCCccc
Confidence 99976554321 122356899999999999999843 3 2567999999998863
No 66
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=5.6e-32 Score=230.66 Aligned_cols=204 Identities=23% Similarity=0.280 Sum_probs=163.3
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCcccc--CCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLT--NGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~--~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
...++|+++|+|||||||.||+|.++|.++.......... +... ..+++++.+|++|.+++...++.++..|++
T Consensus 205 ~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~----~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~ 280 (614)
T PRK08180 205 AVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQT----FPFLAEEPPVLVDWLPWNHTFGGNHNLGIVLYNGGT 280 (614)
T ss_pred CCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhh----ccccCCCCcEEEEecchHHHhhHHHHHHHHHhcCCE
Confidence 4567899999999999999999999999998877665442 2232 568999999999999987677889999999
Q ss_pred EEEccC-CCH---HHHHHHHHhccceeeeechHHHHHHHhCCCC----CCCCccchhhhhccCCCCCHHHHHHHHHh---
Q 039504 98 VLLMQK-FEI---GALLELIQRHRVSVAAVVPPLVLALAKNPMV----ADYDLSSIRVVLSGAAPLGKELEDALRSR--- 166 (240)
Q Consensus 98 ~v~~~~-~~~---~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~----~~~~~~~lr~v~~~G~~~~~~~~~~~~~~--- 166 (240)
+++.+. +++ ..+++.++++++|++.++|.++..|.+.... ....++++|.+++||+++++++.+++++.
T Consensus 281 v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~ 360 (614)
T PRK08180 281 LYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVWDRLDRVAEA 360 (614)
T ss_pred EEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHHHHHHHHHHh
Confidence 988653 443 5678889999999999999999988774322 12346789999999999999999999875
Q ss_pred -CC-CCcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 167 -VP-QAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 167 -~~-~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
++ +.++++.||+||++.++.... ......+++|+|.|+++++|+|+ |+.|||+|+||.+++
T Consensus 361 ~~g~~~~l~~~YG~TE~~~~~~~~~-----~~~~~~~svG~p~pg~~v~i~d~--------~~~GEi~vrg~~v~~ 423 (614)
T PRK08180 361 TCGERIRMMTGLGMTETAPSATFTT-----GPLSRAGNIGLPAPGCEVKLVPV--------GGKLEVRVKGPNVTP 423 (614)
T ss_pred hcCCCceeeeeecccccCCceEecc-----cccCCCCcccCccCCcEEEEecC--------CCCcEEEEecCccch
Confidence 32 367999999999986654431 12235679999999999999983 456999999998863
No 67
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=4.6e-32 Score=249.36 Aligned_cols=212 Identities=21% Similarity=0.229 Sum_probs=176.5
Q ss_pred CCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEE
Q 039504 21 IEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL 100 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 100 (240)
..++|+++++|||||||.||||.++|+++...+.+... .+++.++|+++...|++|..++. .++.+++.|+++++
T Consensus 412 ~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~~~~~~~~~d~~~~-~i~~~L~~G~~l~~ 486 (1389)
T TIGR03443 412 VGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAK----RFGLSENDKFTMLSGIAHDPIQR-DMFTPLFLGAQLLV 486 (1389)
T ss_pred CCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHH----hcCCCCCCEEEEecCceecchHH-HHHHHHhCCCEEEE
Confidence 46789999999999999999999999999888776655 44678899999999999988776 67889999999998
Q ss_pred ccC---CCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccc
Q 039504 101 MQK---FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYG 177 (240)
Q Consensus 101 ~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 177 (240)
.+. .++..+++.++++++|++.++|++++.|.... ...++++|.+++||+++++.+.+++.+.+++++++|.||
T Consensus 487 ~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 563 (1389)
T TIGR03443 487 PTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYG 563 (1389)
T ss_pred cChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECcc
Confidence 764 46889999999999999999999999987543 235678999999999999999999999888899999999
Q ss_pred ccccccchhhccCCCCCC------CCCCCCccccccCCceEEEeeCC-CCCCCCCCCCceEEEeCCCCCC
Q 039504 178 MTEAGPVLSMCLGFAKQP------FPTKSGSCGTVVRNAELKVIDPE-TGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 178 ~tE~~~~~~~~~~~~~~~------~~~~~~~~G~~~~~~~v~i~d~~-~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
+||++..+.......... ......++|+|++++++.|+|++ .+++++.|++|||+|+||++++
T Consensus 564 ~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i~G~~v~~ 633 (1389)
T TIGR03443 564 TTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYVRAGGLAE 633 (1389)
T ss_pred CCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCCceEEEecccccch
Confidence 999986555432111100 01134578999999999999964 3578999999999999999874
No 68
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-32 Score=234.46 Aligned_cols=226 Identities=25% Similarity=0.327 Sum_probs=165.5
Q ss_pred chhhHhhcCC---CCC-CCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCcc-ccCCcEEEEecch
Q 039504 4 HFTVLSEADE---DQI-PEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLY-LTNGDVVLCVLPL 78 (240)
Q Consensus 4 ~~~~l~~~~~---~~~-~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~-~~~~d~~l~~~p~ 78 (240)
+|+++++... ... ......++|+++++|||||||.||||.++|+++...+......+...+. +.++|++++++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl 319 (700)
T PTZ00216 240 AWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEEDETYCSYLPL 319 (700)
T ss_pred EHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCCCCEEEEEChH
Confidence 5666655431 111 1234568999999999999999999999999998877665442211122 3678999999999
Q ss_pred HHhhhhHHHHHHHhhcCceEEEccCCCHHHHHH-------HHHhccceeeeechHHHHHHHhCCCC--------------
Q 039504 79 FHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLE-------LIQRHRVSVAAVVPPLVLALAKNPMV-------------- 137 (240)
Q Consensus 79 ~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~-------~i~~~~~t~l~~~p~~~~~l~~~~~~-------------- 137 (240)
+|+++.. .....+..|+.+.+. ++..+.+ .++++++|++.++|.+++.+.+....
T Consensus 320 ~H~~~~~-~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~ 395 (700)
T PTZ00216 320 AHIMEFG-VTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPPVGSLKRRVFD 395 (700)
T ss_pred HHHHHHH-HHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHHhccCHHHHHHHH
Confidence 9999876 445567788877663 3444444 57889999999999999887642110
Q ss_pred -----------CCCC---------------c-cchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccccccchhhccC
Q 039504 138 -----------ADYD---------------L-SSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLG 190 (240)
Q Consensus 138 -----------~~~~---------------~-~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~ 190 (240)
.+.. + .++|.+++||+++++++.++++..+ + ++++.||+||++......
T Consensus 396 ~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~-~-~l~~~YG~TEt~~~~~~~-- 471 (700)
T PTZ00216 396 HAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVF-G-MVIQGWGLTETVCCGGIQ-- 471 (700)
T ss_pred HHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHh-h-hHhhccCccccccccccc--
Confidence 0000 0 4689999999999999998888877 5 899999999997654432
Q ss_pred CCCCCCCCCCCccccccCCceEEEeeCCCC-CCCCCCCCceEEEeCCCCCC
Q 039504 191 FAKQPFPTKSGSCGTVVRNAELKVIDPETG-ASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 191 ~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~-~~~~~g~~Gel~v~~~~~~~ 240 (240)
.......+++|+|.|+++++|+|.++. ...++++.|||+|+||++++
T Consensus 472 ---~~~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~ 519 (700)
T PTZ00216 472 ---RTGDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFK 519 (700)
T ss_pred ---CCCCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccc
Confidence 112345689999999999999995432 23456778999999999874
No 69
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-31 Score=224.59 Aligned_cols=210 Identities=31% Similarity=0.487 Sum_probs=178.9
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.++|+++++|||||||.||++.++|.++......... .+++..+|+++..+|++|.+++. ++.++..|+++++.
T Consensus 166 ~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~----~~~~~~~~~~l~~~pl~~~~g~~--~~~~l~~G~~~~~~ 239 (524)
T PRK06188 166 LPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLA----EWEWPADPRFLMCTPLSHAGGAF--FLPTLLRGGTVIVL 239 (524)
T ss_pred CCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh----hcCCCcCcEEEEecCchhhhhHH--HHHHHHcCCEEEEc
Confidence 4567999999999999999999999999887776665 45678899999999999988865 57788999999999
Q ss_pred cCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccccc
Q 039504 102 QKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEA 181 (240)
Q Consensus 102 ~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~ 181 (240)
+.+++..+++.+++++++++..+|++++.+++........++++|.+++||++++++..+.+.+.+ +..+++.||+||+
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~ 318 (524)
T PRK06188 240 AKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERF-GPIFAQYYGQTEA 318 (524)
T ss_pred CCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHh-CchhhheeCcccc
Confidence 999999999999999999999999999999988766666788999999999999999999998888 6779999999999
Q ss_pred ccchhhccCCCC-CCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 182 GPVLSMCLGFAK-QPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 182 ~~~~~~~~~~~~-~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
+..+........ ........++|+|.|++.++|+| +++++++.|+.|||+|+|+.++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~-~~~~~~~~g~~Gel~v~~~~~~ 376 (524)
T PRK06188 319 PMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLD-EDGREVAQGEVGEICVRGPLVM 376 (524)
T ss_pred CCceeecCchhccccccccCCccccccCCcEEEEEc-CCCCCCCCCCeeEEEEECcchh
Confidence 765544321111 01123456789999999999999 5589999999999999998765
No 70
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4.8e-32 Score=268.04 Aligned_cols=216 Identities=21% Similarity=0.282 Sum_probs=181.2
Q ss_pred CCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 18 EVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
.....|+|+++|+|||||||.||||.++|.++.+.+..... .+++.++|+++.+.|++|..+.. .++.++..|++
T Consensus 2140 ~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~ 2214 (5163)
T PRK12316 2140 AVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGE----RYELSPADCELQFMSFSFDGAHE-QWFHPLLNGAR 2214 (5163)
T ss_pred CCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHH----hcCCCCcceEEEecCchHHHHHH-HHHHHHhCCCE
Confidence 34567899999999999999999999999999988877766 45678999999999999987776 68899999999
Q ss_pred EEEccC--CCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccc
Q 039504 98 VLLMQK--FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQG 175 (240)
Q Consensus 98 ~v~~~~--~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 175 (240)
+++.+. +++..+++.++++++|++.++|++++.|........ ...++|.+++|||++++++.++|.+.+++.+++|.
T Consensus 2215 ~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~ 2293 (5163)
T PRK12316 2215 VLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDG-RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNG 2293 (5163)
T ss_pred EEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhccc-CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEEC
Confidence 977653 689999999999999999999999999987654333 33489999999999999999999998888999999
Q ss_pred ccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 176 YGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 176 yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
||+||++..+................++|+|++++++.|+| ++++++|.|++|||+|+|+++++
T Consensus 2294 YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~g~~GEl~i~G~~v~~ 2357 (5163)
T PRK12316 2294 YGPTEAVVTPLLWKCRPQDPCGAAYVPIGRALGNRRAYILD-ADLNLLAPGMAGELYLGGEGLAR 2357 (5163)
T ss_pred ccchhheeeeeeeecccccccCCCcCCcccccCCCEEEEEC-CCCCCCCCCCeeEEEecchhhcc
Confidence 99999986554332111111112235799999999999999 66899999999999999999874
No 71
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.6e-31 Score=224.68 Aligned_cols=215 Identities=32% Similarity=0.549 Sum_probs=173.9
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCC-----CccccCC-cEEEEecchHHhhhhHHHHHHHh
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENP-----NLYLTNG-DVVLCVLPLFHIYSLNSVLLCSL 92 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~-----~~~~~~~-d~~l~~~p~~~~~g~~~~~~~~l 92 (240)
....++++++++|||||||.||+|.++|+++..........+.. ...+..+ ++++..+|++|.+++....+..+
T Consensus 202 ~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~ 281 (562)
T PRK12492 202 VPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMM 281 (562)
T ss_pred CCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHh
Confidence 34567899999999999999999999999987665543321110 0112333 56788999999999876677778
Q ss_pred hcCceEEEc-cCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCc
Q 039504 93 RAGAGVLLM-QKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAI 171 (240)
Q Consensus 93 ~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~ 171 (240)
..|...+.. .+.++..+++.++++++|++.++|+++..+.+.....+..++++|.+++||+++++++.+++.+.+ +++
T Consensus 282 ~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~ 360 (562)
T PRK12492 282 VSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLTNSGGTALVKATAERWEQLT-GCT 360 (562)
T ss_pred hcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEEEeccccCCHHHHHHHHHHh-CCc
Confidence 888876655 457899999999999999999999999999887766666778999999999999999999999987 799
Q ss_pred ccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 172 LGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 172 i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
+++.||+||++.++..+.. ......+++|+|.+++.++|+| +++++++.|+.|||+|+|+.++
T Consensus 361 ~~~~YG~tE~~~~~~~~~~----~~~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g~~Gel~v~g~~~~ 423 (562)
T PRK12492 361 IVEGYGLTETSPVASTNPY----GELARLGTVGIPVPGTALKVID-DDGNELPLGERGELCIKGPQVM 423 (562)
T ss_pred eeeccCccccCceeeecCC----cccccCCccceecCCCEEEEEC-CCCCCCCCCCceEEEEeCCccc
Confidence 9999999999876554321 1123456899999999999999 5689999999999999999876
No 72
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.1e-31 Score=219.99 Aligned_cols=211 Identities=27% Similarity=0.435 Sum_probs=175.2
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++++++++|||||||.||++.++|+++......+.. .....++|++++.+|++|.+++...++.++..|++++
T Consensus 131 ~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~ 206 (488)
T PRK09088 131 SIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGV----LGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSIL 206 (488)
T ss_pred CCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHH----hhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEE
Confidence 445688999999999999999999999998776655443 2345788999999999999999877888999999999
Q ss_pred EccCCCHHHHHHHHHh--ccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccc
Q 039504 100 LMQKFEIGALLELIQR--HRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYG 177 (240)
Q Consensus 100 ~~~~~~~~~~~~~i~~--~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 177 (240)
+.+.+++..++..+.+ +++|+++++|+++..+..........++++|.+++||++++.+..+.+.+. ++++++.||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG 284 (488)
T PRK09088 207 VSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPMVDGFG 284 (488)
T ss_pred EcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCceeeeec
Confidence 9888999999988864 899999999999999987655445567789999999999999888888764 788999999
Q ss_pred ccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 178 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 178 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
+||++.+..... .........+++|.|.|+++++|+| +++++++.|+.|||+|+||.++
T Consensus 285 ~TE~~~~~~~~~--~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~ 343 (488)
T PRK09088 285 MSEAGTVFGMSV--DCDVIRAKAGAAGIPTPTVQTRVVD-DQGNDCPAGVPGELLLRGPNLS 343 (488)
T ss_pred ccccccccccCC--CcccccccCCccccCCCCcEEEEEC-CCCCCCcCCCceEEEEECCccc
Confidence 999986543221 1111123457899999999999999 6689999999999999999875
No 73
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-31 Score=228.69 Aligned_cols=207 Identities=23% Similarity=0.225 Sum_probs=166.9
Q ss_pred CCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHH-HHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCc
Q 039504 18 EVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITS-VAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGA 96 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~-~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 96 (240)
....+++|+++|+|||||||.||+|.++|.+++.. ...... .+++.++|+++.+.++.|+.+. .++.++..|+
T Consensus 257 ~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~--~~~~~L~~G~ 330 (655)
T PRK03584 257 FEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGL----HCDLGPGDRFFWYTTCGWMMWN--WLVSGLLVGA 330 (655)
T ss_pred ceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHH----hcCCCCCCEEEEcCCchHHhHH--HHHHHHHcCC
Confidence 34567799999999999999999999999987543 333322 3467889999999998887543 4678899999
Q ss_pred eEEEccC----CCHHHHHHHHHhccceeeeechHHHHHHHhCCC--CCCCCccchhhhhccCCCCCHHHHHHHHHhCC-C
Q 039504 97 GVLLMQK----FEIGALLELIQRHRVSVAAVVPPLVLALAKNPM--VADYDLSSIRVVLSGAAPLGKELEDALRSRVP-Q 169 (240)
Q Consensus 97 ~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~-~ 169 (240)
++++.++ .++..++++++++++|++..+|++++.+.+... ....+++++|.++++|+++++++.+++.+.++ +
T Consensus 331 t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~ 410 (655)
T PRK03584 331 TLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKAD 410 (655)
T ss_pred EEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCCHHHHHHHHHHhCCC
Confidence 9998752 589999999999999999999999999876532 23356789999999999999999999999883 5
Q ss_pred CcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCC
Q 039504 170 AILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGP 236 (240)
Q Consensus 170 ~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 236 (240)
..+.+.||+||++....... .......+++|.|.++++++|+| ++++++ .|+.|||+|+||
T Consensus 411 ~~~~~~yG~TE~~~~~~~~~----~~~~~~~g~~g~p~~g~~~~ivd-~~g~~~-~g~~GeL~v~gp 471 (655)
T PRK03584 411 VWLASISGGTDICSCFVGGN----PLLPVYRGEIQCRGLGMAVEAWD-EDGRPV-VGEVGELVCTKP 471 (655)
T ss_pred ceEEeccChHhhhcccccCC----CCCCcCCCccCCCcCCceeEEEC-CCCCCC-CCCceEEEEccC
Confidence 78999999999864332211 11233457899999999999999 668888 799999999996
No 74
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=6.3e-31 Score=221.46 Aligned_cols=216 Identities=38% Similarity=0.586 Sum_probs=173.4
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhc-CCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVD-GENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~-~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
....++++++++|||||||.||+|.++|.++......... ...........+++++..|++|.+++...++.++..|.+
T Consensus 187 ~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~l~~g~~ 266 (541)
T TIGR03205 187 PAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIYALTVILLRSLRRGDL 266 (541)
T ss_pred CCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHHHHHHHHHHHHhcCCE
Confidence 3456789999999999999999999999998765432211 000011123457889999999998887677889999999
Q ss_pred EEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccc
Q 039504 98 VLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYG 177 (240)
Q Consensus 98 ~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 177 (240)
++....+++..+++.+++++++++.++|+++..+.+........++++|.++.||+++++++.+++.+.+ +.++++.||
T Consensus 267 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~~~~~-~~~~~~~YG 345 (541)
T TIGR03205 267 ISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFFERKT-GLKLKSGWG 345 (541)
T ss_pred EEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHHHHHh-CCCeecccc
Confidence 9888889999999999999999999999999998875444445667899999999999999999999888 789999999
Q ss_pred ccccccchhhccCCCCCCCCCCCCccccccCCceEEEee-CCCCCCCCCCCCceEEEeCCCCC
Q 039504 178 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVID-PETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 178 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
+||++..+..+.. .....++++|+|.+++.++|++ .+.+++++.|+.|||+|+|+.++
T Consensus 346 ~TE~~~~~~~~~~----~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~ 404 (541)
T TIGR03205 346 MTETCSPGTGHPP----EGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVT 404 (541)
T ss_pred cccCCcccccCCC----CCCCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCcc
Confidence 9999876554311 1123456899999999988764 26678999999999999998865
No 75
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-31 Score=223.45 Aligned_cols=215 Identities=30% Similarity=0.495 Sum_probs=171.5
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....++++++++|||||||.||+|.++|.++........... ..+..++|+++..+|++|..++. .++ .+..|++.
T Consensus 158 ~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~--~~~~~~~d~~l~~~p~~~~~~~~-~~~-~~~~g~~~ 233 (528)
T PRK07470 158 AAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADL--MPGTTEQDASLVVAPLSHGAGIH-QLC-QVARGAAT 233 (528)
T ss_pred ccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHh--ccCCCcccEEEEeccchhHHHHH-HHH-HHhcCceE
Confidence 456778999999999999999999999999865543322211 12457889999999999998886 344 45566665
Q ss_pred EEcc--CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccc
Q 039504 99 LLMQ--KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGY 176 (240)
Q Consensus 99 v~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 176 (240)
++.+ .++++.+++.++++++|++.++|++++.+.+........++++|.++++|+++++++.+++.+.+ +.++++.|
T Consensus 234 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~Y 312 (528)
T PRK07470 234 VLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKL-GKVLVQYF 312 (528)
T ss_pred EEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHh-CcHHHHhC
Confidence 5543 58999999999999999999999999999987766666778999999999999999999999988 68899999
Q ss_pred cccccccchhhccCCC--CCC-CCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 177 GMTEAGPVLSMCLGFA--KQP-FPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 177 G~tE~~~~~~~~~~~~--~~~-~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|+||++..+..+.... ... .....+++|+|.++++++|+| +++++++.|+.|||+|+|+.++
T Consensus 313 G~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~ 377 (528)
T PRK07470 313 GLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DEGRELPPGETGEICVIGPAVF 377 (528)
T ss_pred CCcccCCceeecchhhccccccccceeeccCcccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccc
Confidence 9999876554331110 000 122346889999999999999 5689999999999999999875
No 76
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=2.7e-31 Score=221.78 Aligned_cols=215 Identities=26% Similarity=0.347 Sum_probs=179.2
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....++++++++|||||||.||++.++|.++......... .+.+..+++++...|++|..++. .++.++..|+++
T Consensus 138 ~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~ 212 (503)
T PRK04813 138 HAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLE----DFALPEGPQFLNQAPYSFDLSVM-DLYPTLASGGTL 212 (503)
T ss_pred ccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHH----HcCCCcCceeeecCCcchhHhHH-HHHHHHhcCCEE
Confidence 4466788999999999999999999999999887766655 34568899999999999988876 677889999999
Q ss_pred EEccC---CCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccc
Q 039504 99 LLMQK---FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQG 175 (240)
Q Consensus 99 v~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 175 (240)
+..++ .++..+++.+++++++++..+|++++.+..........++++|.++++|+++++.+.+++.+.|++..+++.
T Consensus 213 v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~ 292 (503)
T PRK04813 213 VALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNT 292 (503)
T ss_pred EEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeC
Confidence 88764 588999999999999999999999988766544445567899999999999999999999999988899999
Q ss_pred ccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 176 YGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 176 yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
||+||++..+................++|++.++++++|+| +++++++.|+.|||+|+|+.++
T Consensus 293 yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~ 355 (503)
T PRK04813 293 YGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIID-EEGTKLPDGEQGEIVISGPSVS 355 (503)
T ss_pred cccchheeEEEEEEecccccccCCCCcccccCCCCEEEEEC-CCCCCCCCCCceEEEEeccccc
Confidence 99999875544332211111223445799999999999999 7799999999999999998765
No 77
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-31 Score=224.28 Aligned_cols=211 Identities=27% Similarity=0.412 Sum_probs=172.8
Q ss_pred CCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc
Q 039504 23 PDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ 102 (240)
Q Consensus 23 ~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 102 (240)
++|.++++|||||||.||+|.++|.++......... .+.+.++|++++.+|++|.+++...++.++..|.++++..
T Consensus 175 ~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~ 250 (534)
T PRK05852 175 RPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIIT----GYRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPA 250 (534)
T ss_pred CCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHH----HhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCC
Confidence 467899999999999999999999999887776655 3457889999999999999999877889999999988864
Q ss_pred --CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCC--CCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 103 --KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVA--DYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 103 --~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~--~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
.+++..+++.++++++|++.++|+++..|.+..... ...++++|.++++|+++++++++.+.+.| +.++++.||+
T Consensus 251 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~-~~~v~~~YG~ 329 (534)
T PRK05852 251 RGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEF-AAPVVCAFGM 329 (534)
T ss_pred CcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHh-CCChhhccCc
Confidence 478999999999999999999999999998765432 23467899999999999999999999998 7899999999
Q ss_pred cccccchhhccCCCC---CCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 179 TEAGPVLSMCLGFAK---QPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 179 tE~~~~~~~~~~~~~---~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
||++..+........ .......+..|+ .++++++|+| +++++++.|+.|||+|+|+.+++
T Consensus 330 tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~v~~ 392 (534)
T PRK05852 330 TEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVG-SDGLPLPAGAVGEVWLRGTTVVR 392 (534)
T ss_pred cccchhhhcCCccccccccCcccccccCCC-CCCCeEEEEC-CCCCCCCCCCceEEEEecCcccc
Confidence 999876554321100 001112233344 7999999999 55899999999999999998763
No 78
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-31 Score=225.50 Aligned_cols=216 Identities=22% Similarity=0.257 Sum_probs=167.2
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++++++++|||||||.||+|.++|.++..............+.+..+++.+..+|++|..++. ..+.++..|++++
T Consensus 165 ~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~-~~~~~l~~G~~~v 243 (540)
T PRK05857 165 DQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLW-WILTCLMHGGLCV 243 (540)
T ss_pred CCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHH-HHHHHhhcceeEE
Confidence 356789999999999999999999999998765443221111123566788999999999999887 5677888888877
Q ss_pred EccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccc
Q 039504 100 LMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 100 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 179 (240)
+ .+.++..+++.+++++++++.++|++++.+.+........++++|.+++||++++....++ .+.+ +.++++.||+|
T Consensus 244 ~-~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~-~~~~-g~~i~~~YG~T 320 (540)
T PRK05857 244 T-GGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVRF-IEAT-GVRTAQVYGLS 320 (540)
T ss_pred e-cCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHHH-HHHh-CCeeecccCCC
Confidence 6 4568899999999999999999999999999877666667889999999999998877754 4566 78999999999
Q ss_pred ccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCC-----CCCCCceEEEeCCCCC
Q 039504 180 EAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASL-----PHNQPGEICIRGPQIM 239 (240)
Q Consensus 180 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~-----~~g~~Gel~v~~~~~~ 239 (240)
|++..................+++|+|.++++++|+|++...++ +.|+.|||+|+||.++
T Consensus 321 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~ 385 (540)
T PRK05857 321 ETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANM 385 (540)
T ss_pred cCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchh
Confidence 99754332211110101224578999999999999996544333 4578999999999865
No 79
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=1.7e-31 Score=217.44 Aligned_cols=209 Identities=33% Similarity=0.395 Sum_probs=177.8
Q ss_pred CCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEE
Q 039504 21 IEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL 100 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 100 (240)
..++++++++|||||||.||++.++|+++......... .+.++++|+++...|++|..++. .++.++..|+++++
T Consensus 117 ~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~~~ 191 (408)
T TIGR01733 117 SGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR----RYGLDPDDRVLQFASLSFDASVE-EIFGTLLAGATLVV 191 (408)
T ss_pred CCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH----hcCCCCCceEEEecCCccchhHH-HHHHHHhCCCEEEE
Confidence 34788999999999999999999999999888877766 44577899999999999998886 68899999999988
Q ss_pred ccCC---CHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccc
Q 039504 101 MQKF---EIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYG 177 (240)
Q Consensus 101 ~~~~---~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 177 (240)
.++. .+..+.+.+++++++.+.++|.+++.+.+... ..++++|.++++|+++++++++.+.+.++++.+++.||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG 268 (408)
T TIGR01733 192 PPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYG 268 (408)
T ss_pred cChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEeccc
Confidence 7653 36899999999999999999999999998754 46778999999999999999999999996689999999
Q ss_pred ccccccchhhccCCCCCCCCC-CCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 178 MTEAGPVLSMCLGFAKQPFPT-KSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 178 ~tE~~~~~~~~~~~~~~~~~~-~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
+||++.++....... ..... .+.++|+|.++++++|+|++ +++++.|+.|||+|+|+.++
T Consensus 269 ~tE~g~~~~~~~~~~-~~~~~~~~~~~G~~~~~~~~~i~~~~-~~~~~~g~~Gel~v~~~~~~ 329 (408)
T TIGR01733 269 PTETTVWSTATLVDA-DDAPRESPVPIGRPLANTRLYVLDDD-LRPVPVGVVGELYIGGPGVA 329 (408)
T ss_pred CCceEEEEEEEEcCc-cccCCccccccCcccCCceEEEECCC-CCCCCCCCceEEEecCcccc
Confidence 999987664321111 11111 26789999999999999966 89999999999999998876
No 80
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=5.9e-31 Score=221.51 Aligned_cols=202 Identities=31% Similarity=0.487 Sum_probs=173.2
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++++++++|||||||.||+|.++|.++......... .+++++++++++.+|++|..++. .++.++..|++++
T Consensus 176 ~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~----~~~~~~~~~~l~~~pl~~~~~~~-~~~~~l~~G~~~~ 250 (542)
T PRK06155 176 AVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAE----DLEIGADDVLYTTLPLFHTNALN-AFFQALLAGATYV 250 (542)
T ss_pred CCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHH----hcCCCCCCEEEEecCHHHHHHHH-HHHHHHHcCceEE
Confidence 456789999999999999999999999999776655444 44678899999999999999987 5689999999999
Q ss_pred EccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccc
Q 039504 100 LMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 100 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 179 (240)
+.+++++..+++.+++++++++..+|+++..|.+..........++|.++.+| +++++.+++++.+ +.++++.||+|
T Consensus 251 ~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~~YG~t 327 (542)
T PRK06155 251 LEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERF-GVDLLDGYGST 327 (542)
T ss_pred eeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEeeeccc
Confidence 99889999999999999999999999999999987766655667788766544 6789999999988 78999999999
Q ss_pred ccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCC
Q 039504 180 EAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGP 236 (240)
Q Consensus 180 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 236 (240)
|++.++..+ ......+++|.+.++++++|+| +++++++.|+.|||+|+|+
T Consensus 328 E~~~~~~~~------~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gei~v~~~ 377 (542)
T PRK06155 328 ETNFVIAVT------HGSQRPGSMGRLAPGFEARVVD-EHDQELPDGEPGELLLRAD 377 (542)
T ss_pred ccCccccCC------CCCCCCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecC
Confidence 998765442 1234567899999999999999 5689999999999999998
No 81
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-30 Score=221.14 Aligned_cols=218 Identities=28% Similarity=0.417 Sum_probs=174.9
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....++++++++|||||||.||+|.++|.++.......... .....++|+++..+|++|++|+...++.++..|+++
T Consensus 204 ~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 280 (567)
T PRK06178 204 PPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAV---AVVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATL 280 (567)
T ss_pred CCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHH---hccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceE
Confidence 34567899999999999999999999999988765443321 134678899999999999999865678889999999
Q ss_pred EEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhc--cCCCCCHHHHHHHHHhCCCCcccccc
Q 039504 99 LLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLS--GAAPLGKELEDALRSRVPQAILGQGY 176 (240)
Q Consensus 99 v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~--~G~~~~~~~~~~~~~~~~~~~i~~~y 176 (240)
++.+++++..+++.+++++++++..+|..+..+..........++++|.+.. .++++++++.+.+++.++...+.+.|
T Consensus 281 ~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Y 360 (567)
T PRK06178 281 VLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAW 360 (567)
T ss_pred EEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHHHHHHHHHhCCccccccc
Confidence 9999999999999999999999999999999988765555556667776543 45899999999999998433344579
Q ss_pred cccccccchhhccCCCCCC--CCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 177 GMTEAGPVLSMCLGFAKQP--FPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 177 G~tE~~~~~~~~~~~~~~~--~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|+||++..+.......... ....+.++|+|.|+++++|+|++++++++.|+.|||+|+|+.++
T Consensus 361 G~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~~Gel~v~g~~v~ 425 (567)
T PRK06178 361 GMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELLPLGAEGEIVVRTPSLL 425 (567)
T ss_pred ccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcCCCCCceEEEEECCccc
Confidence 9999876544321111111 12345679999999999999988899999999999999999876
No 82
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.98 E-value=3e-32 Score=215.58 Aligned_cols=228 Identities=27% Similarity=0.434 Sum_probs=182.0
Q ss_pred CcchhhHhhcCCCC-CCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHH
Q 039504 2 CLHFTVLSEADEDQ-IPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFH 80 (240)
Q Consensus 2 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~ 80 (240)
+++|+++++..... .++++..|+|+++|+|||||||.||||+++|.|+.+.+........ .+.+.|+++.++|+.|
T Consensus 214 i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~---~lg~~D~yi~yLPLAH 290 (678)
T KOG1180|consen 214 IISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVP---ELGPKDRYIAYLPLAH 290 (678)
T ss_pred EEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCc---ccCCCceEEEechHHH
Confidence 35788888876544 4455568999999999999999999999999999999887766432 5789999999999999
Q ss_pred hhhhHHHHHHHhhcCceEEEccCCCHHHHHHHH--------HhccceeeeechHHHHHHHhCCCCC--------------
Q 039504 81 IYSLNSVLLCSLRAGAGVLLMQKFEIGALLELI--------QRHRVSVAAVVPPLVLALAKNPMVA-------------- 138 (240)
Q Consensus 81 ~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i--------~~~~~t~l~~~p~~~~~l~~~~~~~-------------- 138 (240)
++.+. .-+.++.-|+.+=+.++.+..+...-| ..++||++.++|..+.++.+....+
T Consensus 291 IlEl~-aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~ 369 (678)
T KOG1180|consen 291 ILELT-AELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWT 369 (678)
T ss_pred HHHHH-HHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHH
Confidence 99998 778999999999887654333222222 3478999999999998876511100
Q ss_pred ------------CC---Cc-------------cchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccccccchhhccC
Q 039504 139 ------------DY---DL-------------SSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLG 190 (240)
Q Consensus 139 ------------~~---~~-------------~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~ 190 (240)
.. .+ ..+|.+++||.|++++..+.+...+ .+++...||.||++...+..
T Consensus 370 aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~-C~Pv~qGYGLTEtca~~tv~-- 446 (678)
T KOG1180|consen 370 AYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICF-CCPVLQGYGLTETCAAATVL-- 446 (678)
T ss_pred HHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhc-cccccccccccchhcccEec--
Confidence 00 00 2589999999999999999999998 78999999999998665553
Q ss_pred CCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCC--CceEEEeCCCCC
Q 039504 191 FAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQ--PGEICIRGPQIM 239 (240)
Q Consensus 191 ~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~--~Gel~v~~~~~~ 239 (240)
+..+...+.+|-|++.++++++|.+++...+.+. .|||+|+|+.|.
T Consensus 447 ---e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt 494 (678)
T KOG1180|consen 447 ---EPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVT 494 (678)
T ss_pred ---ChhhcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccC
Confidence 3445566799999999999999998888777666 799999999986
No 83
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.98 E-value=2.3e-31 Score=227.93 Aligned_cols=230 Identities=29% Similarity=0.383 Sum_probs=169.4
Q ss_pred chhhHhhcCCCC-CCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCC-CccccCCcEEEEecchHHh
Q 039504 4 HFTVLSEADEDQ-IPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENP-NLYLTNGDVVLCVLPLFHI 81 (240)
Q Consensus 4 ~~~~l~~~~~~~-~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~-~~~~~~~d~~l~~~p~~~~ 81 (240)
+|+++++..... .......|+|+++++|||||||.||||.++|+++............. ...+.++|++++++|++|.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~ 278 (660)
T PLN02430 199 SWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHI 278 (660)
T ss_pred EHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHH
Confidence 466666543221 12233568999999999999999999999999998876654321110 1246789999999999999
Q ss_pred hhhHHHHHHHhhcCceEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCC------------------------
Q 039504 82 YSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV------------------------ 137 (240)
Q Consensus 82 ~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~------------------------ 137 (240)
++... .+.++..|+++.+... ++..+++.++++++|++.++|.+++.+.+....
T Consensus 279 ~~~~~-~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (660)
T PLN02430 279 LDRMI-EEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWM 356 (660)
T ss_pred HHHHH-HHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99874 4567888998877653 788899999999999999999999877642100
Q ss_pred -------CCCC-------------c-cchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccccccchhhccCCCCCCC
Q 039504 138 -------ADYD-------------L-SSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPF 196 (240)
Q Consensus 138 -------~~~~-------------~-~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~ 196 (240)
.... + .++|.+++||+++++++.+.++. +++..+++.||+||++....... ...
T Consensus 357 ~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~-~~~~~i~~~YG~TE~~~~~~~~~----~~~ 431 (660)
T PLN02430 357 NRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRV-TSCAFVVQGYGLTETLGPTTLGF----PDE 431 (660)
T ss_pred hcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHH-hcCCCeeeecchhhhhhceEeec----ccc
Confidence 0000 1 47899999999999998766654 43578999999999876554321 111
Q ss_pred CCCCCccccccCCceEEEee-CCCC-CCCCCCCCceEEEeCCCCCC
Q 039504 197 PTKSGSCGTVVRNAELKVID-PETG-ASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 197 ~~~~~~~G~~~~~~~v~i~d-~~~~-~~~~~g~~Gel~v~~~~~~~ 240 (240)
....+++|+|.|+++++|+| ++.+ .+++.+..|||+|+||.+++
T Consensus 432 ~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~ 477 (660)
T PLN02430 432 MCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFS 477 (660)
T ss_pred CCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccc
Confidence 23468899999999999987 3333 55666778999999999874
No 84
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.98 E-value=1.3e-30 Score=220.31 Aligned_cols=216 Identities=30% Similarity=0.525 Sum_probs=172.7
Q ss_pred CCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccc---cCCcEEEEecchHHhhhhHHHHHHHhhc
Q 039504 18 EVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYL---TNGDVVLCVLPLFHIYSLNSVLLCSLRA 94 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~---~~~d~~l~~~p~~~~~g~~~~~~~~l~~ 94 (240)
.....++++++++|||||||.||+|.++|.++................. ...+.+++.+|++|.+++....+.++..
T Consensus 198 ~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~ 277 (557)
T PRK07059 198 PVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRT 277 (557)
T ss_pred CCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhh
Confidence 3456788999999999999999999999999876654332211101111 1245677889999998876556677777
Q ss_pred CceEEEcc-CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccc
Q 039504 95 GAGVLLMQ-KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILG 173 (240)
Q Consensus 95 G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~ 173 (240)
|+..++.+ ..++..+++.+++++++++..+|.++..+..........++++|.++.||+++++.+.+++.+.+ +++++
T Consensus 278 g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~ 356 (557)
T PRK07059 278 GGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANGGGMAVQRPVAERWLEMT-GCPIT 356 (557)
T ss_pred cceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEeccccCCHHHHHHHHHHh-CCCee
Confidence 77766554 46899999999999999999999999999987766666778999999999999999999999988 79999
Q ss_pred ccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 174 QGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 174 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
+.||+||++.++..+.. .......++|+|++++.++|+| +++++++.|+.|||+|+|+.++
T Consensus 357 ~~YG~tE~~~~~~~~~~----~~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~ 417 (557)
T PRK07059 357 EGYGLSETSPVATCNPV----DATEFSGTIGLPLPSTEVSIRD-DDGNDLPLGEPGEICIRGPQVM 417 (557)
T ss_pred eccccccccchhhcCCC----CCCCcCCcccCccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccc
Confidence 99999999876554321 1123457899999999999999 6789999999999999998775
No 85
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.98 E-value=1.3e-30 Score=219.48 Aligned_cols=213 Identities=24% Similarity=0.406 Sum_probs=170.5
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHH-HHH-hhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCc
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLIT-SVA-QQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGA 96 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~-~~~-~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 96 (240)
....++++++++|||||||.||+|.++|.++.. ... .... .++++.+|+++...|++|.+++. ..+.++..|+
T Consensus 172 ~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~p~~h~~~~~-~~~~~~~~g~ 246 (542)
T PRK06018 172 KTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGD----ALGTSAADTMLPVVPLFHANSWG-IAFSAPSMGT 246 (542)
T ss_pred ccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhh----hcCCCCCCEEEEecCHHHHhhhH-HHHhhhhcCc
Confidence 345677899999999999999999999987432 221 1111 44678899999999999998886 4567788999
Q ss_pred eEEEcc-CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccc
Q 039504 97 GVLLMQ-KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQG 175 (240)
Q Consensus 97 ~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 175 (240)
++++.. .+++..+++.++++++|++.++|++++.+.+.......+++++|.++++|+++++++++++++ + +.++++.
T Consensus 247 ~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~-~~~~~~~ 324 (542)
T PRK06018 247 KLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED-M-GVEVRHA 324 (542)
T ss_pred eEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH-h-CCCeEee
Confidence 988864 588999999999999999999999999998877666667789999999999999999999999 7 8999999
Q ss_pred ccccccccchhhccCCCCCC------CCCCCCccccccCCceEEEeeCCCCCCCCCC--CCceEEEeCCCCC
Q 039504 176 YGMTEAGPVLSMCLGFAKQP------FPTKSGSCGTVVRNAELKVIDPETGASLPHN--QPGEICIRGPQIM 239 (240)
Q Consensus 176 yG~tE~~~~~~~~~~~~~~~------~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g--~~Gel~v~~~~~~ 239 (240)
||+||++.+...+....... ......++|+|.++++++|+| +++++++.+ +.|||+|+|+.++
T Consensus 325 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~~ 395 (542)
T PRK06018 325 WGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAVA 395 (542)
T ss_pred ecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCcc
Confidence 99999987654431111000 011235789999999999999 568888764 6799999998875
No 86
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.98 E-value=7.7e-31 Score=219.72 Aligned_cols=209 Identities=24% Similarity=0.326 Sum_probs=169.4
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.+++.++++|||||||.||+|.++|... +......... ...++.++|+++..+|++|.+++. ..+.++..|++++..
T Consensus 172 ~~~~~~~il~TSGTTG~PK~v~~s~~~~-~~~~~~~~~~-~~~~~~~~d~~~~~~pl~h~~g~~-~~~~~l~~G~~~~~~ 248 (516)
T PRK13383 172 VAAPGRIVLLTSGTTGKPKGVPRAPQLR-SAVGVWVTIL-DRTRLRTGSRISVAMPMFHGLGLG-MLMLTIALGGTVLTH 248 (516)
T ss_pred CCCCCcEEEECCCCCCCCCeeeecchhh-hhhhhHHhHH-hhhccCCCCeEEEecCCcchhhHH-HHHHHHhcCCEEEEC
Confidence 3456779999999999999999998743 2111111100 134578899999999999999986 567788999999998
Q ss_pred cCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCC--CCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccc
Q 039504 102 QKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV--ADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 102 ~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 179 (240)
..+++..+++.+++++++.+.++|+++..+...... ....++++|.+++||+++++++++++.+.| +..+++.||+|
T Consensus 249 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~v~~~YG~t 327 (516)
T PRK13383 249 RHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-GDILYNGYGST 327 (516)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc-Cchhhhccccc
Confidence 889999999999999999999999999999876432 123567899999999999999999999999 78899999999
Q ss_pred ccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 180 EAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 180 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|++..+..+. .......+++|+|.|+++++|+| +++++++.|+.|||+|+|+.++
T Consensus 328 E~~~~~~~~~----~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~ 382 (516)
T PRK13383 328 EVGIGALATP----ADLRDAPETVGKPVAGCPVRILD-RNNRPVGPRVTGRIFVGGELAG 382 (516)
T ss_pred ccccceeccc----cccccCCCcccCCCCCcEEEEEC-CCCCCCCCCCceEEEEecCccc
Confidence 9985543321 11223457899999999999999 6689999999999999998875
No 87
>PRK05691 peptide synthase; Validated
Probab=99.97 E-value=4.6e-31 Score=259.44 Aligned_cols=210 Identities=27% Similarity=0.383 Sum_probs=180.4
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++++++++|||||||.||||.++|+++...+.+... .+++.++|+++...|+.|..+.. .++.++..|++++
T Consensus 1269 ~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~fd~s~~-~~~~~L~~G~~l~ 1343 (4334)
T PRK05691 1269 HLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQA----TYALDDSDVLMQKAPISFDVSVW-ECFWPLITGCRLV 1343 (4334)
T ss_pred CCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHH----hcCCCCCCEEEEeCCccHHHHHH-HHHHHHhCCCEEE
Confidence 456789999999999999999999999999888877665 45678999999999999888877 6788999999999
Q ss_pred Ecc---CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccc
Q 039504 100 LMQ---KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGY 176 (240)
Q Consensus 100 ~~~---~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 176 (240)
+.+ ..++..+++.++++++|++.++|++++.+..... ...++++|.+++|||++++++.+++.+.+++.+++|.|
T Consensus 1344 i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 1421 (4334)
T PRK05691 1344 LAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL--AAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRY 1421 (4334)
T ss_pred EcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc--cccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCC
Confidence 875 4789999999999999999999999999987533 23567899999999999999999999999889999999
Q ss_pred cccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 177 GMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 177 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
|+||++..+..... ........++|+|++++.++|+| +.++++|.|++|||+|+|+++++
T Consensus 1422 G~TE~~~~~~~~~~---~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v~~ 1481 (4334)
T PRK05691 1422 GPTETAINVTHWQC---QAEDGERSPIGRPLGNVLCRVLD-AELNLLPPGVAGELCIGGAGLAR 1481 (4334)
T ss_pred CcChheeeeeeeec---ccccCCCCcccceeCCCEEEEEC-CCCCCCCCCCceEEEecCcccch
Confidence 99999865543211 11223456899999999999999 66899999999999999999874
No 88
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.97 E-value=3.5e-30 Score=215.86 Aligned_cols=206 Identities=29% Similarity=0.375 Sum_probs=169.9
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....++++++++|||||||.||++.++|.++......... ...+.+++++++.+|++|..+....++.++..|+++
T Consensus 168 ~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~ 243 (517)
T PRK08008 168 PPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAW----QCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATF 243 (517)
T ss_pred CCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhh----hcCCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcEE
Confidence 3456789999999999999999999999998765432222 224678999999999999887776788899999999
Q ss_pred EEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 99 LLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 99 v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
++.+.+++..+++.+++++++++.++|++++.+.............+|.+..+ .++++++++.+.+.+ ++++++.||+
T Consensus 244 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~YG~ 321 (517)
T PRK08008 244 VLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFY-LNLSDQEKDAFEERF-GVRLLTSYGM 321 (517)
T ss_pred EEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEe-cCCCHHHHHHHHHHh-CCeEEeeccc
Confidence 99999999999999999999999999999999887655444445677877665 478999999999988 7999999999
Q ss_pred cccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeC
Q 039504 179 TEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRG 235 (240)
Q Consensus 179 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~ 235 (240)
||++..+.... ........++|+|.++++++|+| +++++++.|+.|||+|+|
T Consensus 322 tE~~~~~~~~~----~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~v~g 373 (517)
T PRK08008 322 TETIVGIIGDR----PGDKRRWPSIGRPGFCYEAEIRD-DHNRPLPAGEIGEICIKG 373 (517)
T ss_pred cccccccccCC----ccccccCCccccCCCCcEEEEEC-CCCCCCCCCCcceEEEeC
Confidence 99975444321 11223456899999999999999 678999999999999998
No 89
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.97 E-value=6.5e-31 Score=224.53 Aligned_cols=204 Identities=23% Similarity=0.274 Sum_probs=160.2
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCcccc---CCcEEEEecchHHhhhhHHHHHHHhhcCc
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLT---NGDVVLCVLPLFHIYSLNSVLLCSLRAGA 96 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~---~~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 96 (240)
...++|+++++|||||||.||+|.++|.++........... ... ..++++..+|++|.+++...++.++..|+
T Consensus 216 ~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~----~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~ 291 (624)
T PRK12582 216 AITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLR----PREPDPPPPVSLDWMPWNHTMGGNANFNGLLWGGG 291 (624)
T ss_pred cCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhc----cccCCCCCceEEEechHHHHHhHHHHHHHHHhCce
Confidence 35678999999999999999999999999987765543311 222 35789999999999998766778899999
Q ss_pred eEEEccC-CCH---HHHHHHHHhccceeeeechHHHHHHHhCCCCC----CCCccchhhhhccCCCCCHHHHHHHHHhC-
Q 039504 97 GVLLMQK-FEI---GALLELIQRHRVSVAAVVPPLVLALAKNPMVA----DYDLSSIRVVLSGAAPLGKELEDALRSRV- 167 (240)
Q Consensus 97 ~~v~~~~-~~~---~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~----~~~~~~lr~v~~~G~~~~~~~~~~~~~~~- 167 (240)
++++.++ +++ ..+++.++++++|++.++|.+++.|.+..... ...++++|.+++||+++++++.+++++.+
T Consensus 292 tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~~~~~~~~~~~~ 371 (624)
T PRK12582 292 TLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLSDDLYERMQALAV 371 (624)
T ss_pred EEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCCHHHHHHHHHHHH
Confidence 9988753 333 45677788999999999999999887643322 12457899999999999999999998863
Q ss_pred ---C-CCcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 168 ---P-QAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 168 ---~-~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
+ ++++++.||+||++.++.... ......+++|+|+|+++++|+ +.|+.|||+|+||.+++
T Consensus 372 ~~~g~~~~l~~~YG~TE~~~~~~~~~-----~~~~~~~svG~p~pg~~v~i~--------~~G~~GEl~vrg~~v~~ 435 (624)
T PRK12582 372 RTTGHRIPFYTGYGATETAPTTTGTH-----WDTERVGLIGLPLPGVELKLA--------PVGDKYEVRVKGPNVTP 435 (624)
T ss_pred hhcCCCceEEeccccccccceeeccc-----CCCCCCCCCCcCCCCcEEEEc--------cCCCceEEEEECCcccc
Confidence 2 367999999999986554221 112446789999999999986 35888999999998863
No 90
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.97 E-value=2.1e-30 Score=219.71 Aligned_cols=230 Identities=23% Similarity=0.353 Sum_probs=176.2
Q ss_pred chhhHhhcCCCCCCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhh
Q 039504 4 HFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYS 83 (240)
Q Consensus 4 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g 83 (240)
.|+++.+............++++++++|||||||.||+|.++|.++......... ...+++.+++++++.+|++|.++
T Consensus 161 ~~~~l~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~--~~~~~~~~~~~~l~~~pl~h~~g 238 (576)
T PRK05620 161 SYEALLDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRT--TDSLAVTHGESFLCCVPIYHVLS 238 (576)
T ss_pred cHHHHhhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhh--hhhcCCCCCCeEEEeCChHHhhh
Confidence 3566665443333334466789999999999999999999999998654432211 11346788999999999999999
Q ss_pred hHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHH
Q 039504 84 LNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDA 162 (240)
Q Consensus 84 ~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~ 162 (240)
+. ..+.++..|.++++.. .+++..+++.++++++++++++|+++..+............++|.++++|+++++++.++
T Consensus 239 ~~-~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~ 317 (576)
T PRK05620 239 WG-VPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKA 317 (576)
T ss_pred hH-HHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHH
Confidence 87 5678888999988875 589999999999999999999999999887654333333457999999999999999999
Q ss_pred HHHhCCCCcccccccccccccchhhccCCCC---CCCCCCCCccccccCCceEEEeeCCCCCCCC--CCCCceEEEeCCC
Q 039504 163 LRSRVPQAILGQGYGMTEAGPVLSMCLGFAK---QPFPTKSGSCGTVVRNAELKVIDPETGASLP--HNQPGEICIRGPQ 237 (240)
Q Consensus 163 ~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~---~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~--~g~~Gel~v~~~~ 237 (240)
+++.+ ++++++.||+||++..+........ ........++|++.++++++|+| + +++++ +++.|||+|+|+.
T Consensus 318 ~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~ 394 (576)
T PRK05620 318 WEERY-GVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNW 394 (576)
T ss_pred HHHHh-CCceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEec-C-CccccCCCCCceEEEEEcCc
Confidence 99988 7899999999999865543311000 00011234789999999999999 4 66664 5789999999998
Q ss_pred CC
Q 039504 238 IM 239 (240)
Q Consensus 238 ~~ 239 (240)
++
T Consensus 395 ~~ 396 (576)
T PRK05620 395 VT 396 (576)
T ss_pred cc
Confidence 76
No 91
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.97 E-value=3.5e-30 Score=215.45 Aligned_cols=208 Identities=31% Similarity=0.412 Sum_probs=169.9
Q ss_pred CCCCCcEEEecCCCCCCCCceeeeehHHHHHHH---HhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 21 IEPDDPVALPFSSGTTGLPKGVVLTHKSLITSV---AQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~---~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
..++++++++|||||||.||+|.++|....... ..... .+++.++++++...|++|..+.. ..+.++..|++
T Consensus 149 ~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~~~~-~~~~~~~~g~~ 223 (509)
T PRK12406 149 PPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRAL----IYGLKPGIRALLTGPLYHSAPNA-YGLRAGRLGGV 223 (509)
T ss_pred CCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhh----hcCCCCCceEEEEeCCcccchHH-HHHHHHhhheE
Confidence 356899999999999999999998766543322 22222 45678999999999999987765 44556788999
Q ss_pred EEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCC--CCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccc
Q 039504 98 VLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV--ADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQG 175 (240)
Q Consensus 98 ~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 175 (240)
+++.+.+++..+++.+++++++++.++|++++.|+..... ...+++++|.++.||+++++++++++.+.+ ++.+++.
T Consensus 224 ~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~~~ 302 (509)
T PRK12406 224 LVLQPRFDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWW-GPVIYEY 302 (509)
T ss_pred EEEccCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHc-CCcEEee
Confidence 9988889999999999999999999999999999875432 234567899999999999999999999988 7889999
Q ss_pred ccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 176 YGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 176 yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
||+||++.++..+. ......++++|++.+++.++|+| +++++++.|+.|||+++|+.++
T Consensus 303 YG~tE~~~~~~~~~----~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~ 361 (509)
T PRK12406 303 YGSTESGAVTFATS----EDALSHPGTVGKAAPGAELRFVD-EDGRPLPQGEIGEIYSRIAGNP 361 (509)
T ss_pred ccccccCceEecCc----ccccccCCCcCccCCCcEEEEEC-CCCCCCCCCCceEEEEECCccc
Confidence 99999987554331 12223457899999999999999 6689999999999999998764
No 92
>PRK05691 peptide synthase; Validated
Probab=99.97 E-value=1.4e-30 Score=256.16 Aligned_cols=212 Identities=24% Similarity=0.335 Sum_probs=180.9
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....|++++||+|||||||.||||.++|+++.+...+... .+++++.|+++...++.+..+.+ .++.++..|+++
T Consensus 3864 ~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~----~~~~~~~~~~~~~~s~~fd~s~~-~~~~~l~~G~~l 3938 (4334)
T PRK05691 3864 IYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVP----YLALSEADVIAQTASQSFDISVW-QFLAAPLFGARV 3938 (4334)
T ss_pred CCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHH----hcCCCccceEEEecCCchhHHHH-HHHHHHhCCCEE
Confidence 3467899999999999999999999999999998877665 45789999999999999998887 678888899988
Q ss_pred EEccC---CCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccc
Q 039504 99 LLMQK---FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQG 175 (240)
Q Consensus 99 v~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 175 (240)
++.+. .++..+++.++++++|++.++|++++.+.... ...++++|.+++|||++++++.++|.+.+++++++|.
T Consensus 3939 ~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~ 4015 (4334)
T PRK05691 3939 EIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNA 4015 (4334)
T ss_pred EEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeC
Confidence 88753 68899999999999999999999999887643 2346789999999999999999999998889999999
Q ss_pred ccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 176 YGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 176 yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
||+||++..+....... ........++|+|++++.+.|+| +.++++|.|.+|||+|+|+.|++
T Consensus 4016 YG~TE~t~~~~~~~~~~-~~~~~~~~~iG~p~~~~~~~v~d-~~~~~~p~g~~GEL~i~G~~v~~ 4078 (4334)
T PRK05691 4016 YGPAECSDDVAFFRVDL-ASTRGSYLPIGSPTDNNRLYLLD-EALELVPLGAVGELCVAGTGVGR 4078 (4334)
T ss_pred ccCccceeEEEEEEccc-ccccCCcCCCCCccCCCEEEEEC-CCCCCCCCCCceEEEEecccccc
Confidence 99999987655432211 11122345799999999999999 77999999999999999999875
No 93
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.97 E-value=5.8e-30 Score=216.47 Aligned_cols=215 Identities=27% Similarity=0.491 Sum_probs=170.9
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCC-cEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNG-DVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~-d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
....++++++++|||||||.||++.++|.++..........+...-.+.++ ++++...|++|.+++....+.++..|+.
T Consensus 203 ~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 282 (560)
T PRK08751 203 LQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGC 282 (560)
T ss_pred CCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccce
Confidence 345678999999999999999999999999987765544322111113344 5677889999998876444555555555
Q ss_pred EE-EccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccc
Q 039504 98 VL-LMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGY 176 (240)
Q Consensus 98 ~v-~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 176 (240)
.+ .....++..+++.++++++|++..+|.++..+.+........++++|.+++||+++++++.+.+++.+ ++.+++.|
T Consensus 283 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~~~~~Y 361 (560)
T PRK08751 283 NHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGMAVQRSVAERWKQVT-GLTLVEAY 361 (560)
T ss_pred EEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeCCCCCCHHHHHHHHHHh-CCeEEEee
Confidence 44 44568899999999999999999999999999987655556678999999999999999999999988 78899999
Q ss_pred cccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 177 GMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 177 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|+||++..+..+.. ......+++|.|.+++.++|+| +++++++.|+.|||+|+|+.++
T Consensus 362 G~tE~~~~~~~~~~----~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~~~~~~ 419 (560)
T PRK08751 362 GLTETSPAACINPL----TLKEYNGSIGLPIPSTDACIKD-DAGTVLAIGEIGELCIKGPQVM 419 (560)
T ss_pred ccccCCCceecccc----cccccCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCccc
Confidence 99999876544321 1123456789999999999999 6789999999999999999775
No 94
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.97 E-value=2.4e-30 Score=217.95 Aligned_cols=209 Identities=26% Similarity=0.378 Sum_probs=171.7
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.++++++++|||||||.||+|.++|.++......... .+++.+++++++.+|++|.+|+. .++.++..|+++++.
T Consensus 179 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~g~~-~~~~~l~~G~~~~~~ 253 (540)
T PRK06164 179 DPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIAR----AYGYDPGAVLLAALPFCGVFGFS-TLLGALAGGAPLVCE 253 (540)
T ss_pred CCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHH----hcCCCCCCEEEEcCCchhHHHHH-HHHHHHhcCceEEec
Confidence 4578999999999999999999999999888776665 44678999999999999999997 688999999999999
Q ss_pred cCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccC-CCCCHHHHHHHHHhCCCCcccccccccc
Q 039504 102 QKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGA-APLGKELEDALRSRVPQAILGQGYGMTE 180 (240)
Q Consensus 102 ~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G-~~~~~~~~~~~~~~~~~~~i~~~yG~tE 180 (240)
+.+++..+++.++++++|+++++|+++..|.+. ......++++|.+.++| .+...++.+++.+. ++++++.||+||
T Consensus 254 ~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~YG~tE 330 (540)
T PRK06164 254 PVFDAARTARALRRHRVTHTFGNDEMLRRILDT-AGERADFPSARLFGFASFAPALGELAALARAR--GVPLTGLYGSSE 330 (540)
T ss_pred CCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHh-hcccCCCcceeeeeeccCCcchHHHHHHHhhc--CCceecceeecc
Confidence 889999999999999999999999999999887 23345677888876665 45566777777665 788999999999
Q ss_pred cccchhhccCCCCCCCCCCCCcccccc-CCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 181 AGPVLSMCLGFAKQPFPTKSGSCGTVV-RNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
++..+...... ..........|++. +++.++|+|++++++++.|+.|||||+|++++.
T Consensus 331 ~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~ 389 (540)
T PRK06164 331 VQALVALQPAT--DPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMR 389 (540)
T ss_pred ccceeeccCCC--CCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccc
Confidence 98765443211 11122234567775 899999999999999999999999999998763
No 95
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.97 E-value=3.4e-30 Score=220.85 Aligned_cols=221 Identities=20% Similarity=0.244 Sum_probs=166.0
Q ss_pred chhhHhhcCC-CCCCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHH-HhhhcCCCCCccccCCcEEEEecchHHh
Q 039504 4 HFTVLSEADE-DQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSV-AQQVDGENPNLYLTNGDVVLCVLPLFHI 81 (240)
Q Consensus 4 ~~~~l~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~-~~~~~~~~~~~~~~~~d~~l~~~p~~~~ 81 (240)
.|+++.+... .........++|+++|+|||||||.||+|+++|.+++... ..... .++++++|+++...|+.|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~ 318 (652)
T TIGR01217 243 DLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGL----HCDLGPGDRLFYYTTTGWM 318 (652)
T ss_pred cHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHh----ccCCCCCcEEEEeCCcchh
Confidence 3555544321 1222334567899999999999999999999999865432 22222 3467899999999999987
Q ss_pred hhhHHHHHHHhhcCceEEEccC----CCHHHHHHHHHhccceeeeechHHHHHHHhCCC--CCCCCccchhhhhccCCCC
Q 039504 82 YSLNSVLLCSLRAGAGVLLMQK----FEIGALLELIQRHRVSVAAVVPPLVLALAKNPM--VADYDLSSIRVVLSGAAPL 155 (240)
Q Consensus 82 ~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~~~~~~~lr~v~~~G~~~ 155 (240)
... .++.++..|+++++.++ .++..++++++++++|++...|.+++.+.+... ....++++||.++++|+++
T Consensus 319 ~~~--~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l 396 (652)
T TIGR01217 319 MWN--WLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPL 396 (652)
T ss_pred hhH--HHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCC
Confidence 532 34588999999998752 378899999999999999888888777765321 2345678999999999999
Q ss_pred CHHHHHHHHHhCC-CCcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEe
Q 039504 156 GKELEDALRSRVP-QAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIR 234 (240)
Q Consensus 156 ~~~~~~~~~~~~~-~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~ 234 (240)
++++.+++.+.++ +..+.+.||+||.+...... ........+++|.|.++++++|+| ++++++ .|+.|||+|+
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~----~~~~~~~~g~~g~p~~g~~v~ivd-~~g~~~-~g~~GEl~v~ 470 (652)
T TIGR01217 397 PPDGFRWVYDEIKADVWLASISGGTDICSCFAGA----NPTLPVHIGEIQAPGLGTAVQSWD-PEGKPV-TGEVGELVCT 470 (652)
T ss_pred CHHHHHHHHHHhCCCceEEeccCHHHHhccccCC----CCCCCCcCCccCCCcCCCceEEEC-CCCCCC-CCCccEEEEe
Confidence 9999999999874 34577899999975332211 011123456889999999999999 568888 5999999999
Q ss_pred CC
Q 039504 235 GP 236 (240)
Q Consensus 235 ~~ 236 (240)
||
T Consensus 471 gp 472 (652)
T TIGR01217 471 NP 472 (652)
T ss_pred cC
Confidence 96
No 96
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.97 E-value=8.9e-30 Score=215.32 Aligned_cols=212 Identities=28% Similarity=0.511 Sum_probs=173.0
Q ss_pred CCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEE
Q 039504 21 IEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL 100 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 100 (240)
..++++++++|||||||.||+|.++|.++..........+. ......++.++..+|++|.+++....+..+..|++.++
T Consensus 203 ~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~ 281 (560)
T PRK08974 203 LVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYG-PLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLL 281 (560)
T ss_pred CCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhc-cccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEE
Confidence 56789999999999999999999999999876544332211 11234567788899999998876556667778877655
Q ss_pred c-cCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccc
Q 039504 101 M-QKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 101 ~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 179 (240)
. +..++..+++.+++++++++.++|++++.+..........++++|.+++||+++++.+.++|++.+ +.++++.||+|
T Consensus 282 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~~YG~t 360 (560)
T PRK08974 282 ITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGMAVQQAVAERWVKLT-GQYLLEGYGLT 360 (560)
T ss_pred ecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCccCCHHHHHHHHHHh-CCcEEeeeccc
Confidence 4 457889999999999999999999999999887655556678999999999999999999999987 88999999999
Q ss_pred ccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 180 EAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 180 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|++..+..+... .....+++|+|.|++.++|+| +++++++.|+.|||+|+|+.++
T Consensus 361 E~~~~~~~~~~~----~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~ 415 (560)
T PRK08974 361 ECSPLVSVNPYD----LDYYSGSIGLPVPSTEIKLVD-DDGNEVPPGEPGELWVKGPQVM 415 (560)
T ss_pred ccCceeeccCCC----CcccCCccccCcCCCEEEEEC-CCCCCCCCCCceEEEEecCCcc
Confidence 998766554211 123356899999999999999 5689999999999999999875
No 97
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.97 E-value=1.1e-29 Score=213.13 Aligned_cols=205 Identities=26% Similarity=0.410 Sum_probs=168.1
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....++++++++|||||||.||++.++|+++......... .+++.++|+++..+|++|.+++...++.++..|+++
T Consensus 147 ~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~ 222 (529)
T PRK07867 147 RVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQ----RFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASI 222 (529)
T ss_pred ccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHH----hhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceE
Confidence 3456789999999999999999999999999877766555 446788999999999999999876677889999999
Q ss_pred EEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 99 LLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 99 v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
++.+++++..+++.++++++|++..+|+.+..+....+.......++|. ++||+++++.. +++.+.+ ++++++.||+
T Consensus 223 ~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~-g~~l~~~YG~ 299 (529)
T PRK07867 223 ALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRF-GCVVVDGFGS 299 (529)
T ss_pred EecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHh-CCcEEEeecc
Confidence 9988899999999999999999999999999888765433333356774 56888877664 6777778 7899999999
Q ss_pred cccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCC------------CceEEE-eCCCCC
Q 039504 179 TEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQ------------PGEICI-RGPQIM 239 (240)
Q Consensus 179 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~------------~Gel~v-~~~~~~ 239 (240)
||++...... .....+++|.|.++ ++|+|++++++++.|+ .|||++ +|+.++
T Consensus 300 TE~~~~~~~~-------~~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~ 364 (529)
T PRK07867 300 TEGGVAITRT-------PDTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGF 364 (529)
T ss_pred cccccccccC-------CCCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCccc
Confidence 9987544321 11234678999998 7888988899999998 999999 998775
No 98
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.97 E-value=1e-29 Score=213.96 Aligned_cols=205 Identities=25% Similarity=0.313 Sum_probs=163.2
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++++++++|||||||.||+|.++|.++......... .+++.++|+++..+|++|..++...++.++..|++++
T Consensus 146 ~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v 221 (540)
T PRK13388 146 EVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTE----RFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVA 221 (540)
T ss_pred CCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHH----HhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEE
Confidence 466799999999999999999999999999877665554 4467899999999999999988766677899999999
Q ss_pred EccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccc
Q 039504 100 LMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 100 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 179 (240)
+.+.+++..+++.+++++++++..+|+.+..+............++|. . .|+++.++..+++.+.+ +.++++.||+|
T Consensus 222 ~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~-~-~G~~~~~~~~~~~~~~~-~~~l~~~YG~t 298 (540)
T PRK13388 222 LPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRV-A-FGNEASPRDIAEFSRRF-GCQVEDGYGSS 298 (540)
T ss_pred ECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEE-E-ECCCCCHHHHHHHHHHh-CCceecccccc
Confidence 988899999999999999999999999999888765433222335553 2 36667888889999988 78999999999
Q ss_pred ccccchhhccCCCCCCCCCCCCccccccCCceEE-----------EeeCCCCCCC-CCCCCceEEEe-CCCCC
Q 039504 180 EAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELK-----------VIDPETGASL-PHNQPGEICIR-GPQIM 239 (240)
Q Consensus 180 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~-----------i~d~~~~~~~-~~g~~Gel~v~-~~~~~ 239 (240)
|++.++... .....+++|+|.+++++. ++| ++++++ +.++.|||+++ |+.++
T Consensus 299 E~~~~~~~~-------~~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~ 363 (540)
T PRK13388 299 EGAVIVVRE-------PGTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALLNADEAIGELVNTAGAGFF 363 (540)
T ss_pred cccceeecC-------CCCCCCCCCCCCCCcEEEcCCCCccccceecc-CccccccCCCcceEEEEecCCccc
Confidence 998655432 123457899999997642 444 445555 45678999998 88876
No 99
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=1.2e-29 Score=229.86 Aligned_cols=204 Identities=29% Similarity=0.544 Sum_probs=171.9
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++|+++++|||||||.||+|.++|+++......... .++..++|++++.+|++|.+++...++.++..|.+++
T Consensus 789 ~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~ 864 (1140)
T PRK06814 789 NRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAA----RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVF 864 (1140)
T ss_pred CCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHH----hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEE
Confidence 357899999999999999999999999999887776655 4467889999999999999998667888999999998
Q ss_pred EccC-CCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 100 LMQK-FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 100 ~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
+.++ .+.+.+.+.++++++|++..+|++++.+.+.. ...+++++|.+++||+++++++++.+.+.+ +.++++.||+
T Consensus 865 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~~YG~ 941 (1140)
T PRK06814 865 LYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILEGYGV 941 (1140)
T ss_pred EecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEecccc
Confidence 8764 67788899999999999999999999887753 234567899999999999999999999998 7899999999
Q ss_pred cccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 179 TEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 179 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
||++..+..+. ......+++|+|.|++++++++.+ + .|+.|||+|+|+.+++
T Consensus 942 TE~~~~~~~~~-----~~~~~~~~vG~p~~g~~~~~~~~~-~----~~~~Gel~v~g~~~~~ 993 (1140)
T PRK06814 942 TETAPVIALNT-----PMHNKAGTVGRLLPGIEYRLEPVP-G----IDEGGRLFVRGPNVML 993 (1140)
T ss_pred ccccceEEecC-----CCCCCCCcCCccCCCCeEEEeecC-C----CCCceEEEEeCCCcch
Confidence 99987654431 122346789999999999998732 2 4678999999998763
No 100
>PRK13390 acyl-CoA synthetase; Provisional
Probab=99.97 E-value=5.1e-30 Score=214.08 Aligned_cols=207 Identities=25% Similarity=0.379 Sum_probs=161.9
Q ss_pred CcEEEecCCCCCCCCceeeee--hHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc
Q 039504 25 DPVALPFSSGTTGLPKGVVLT--HKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ 102 (240)
Q Consensus 25 ~~~~i~~TSGtTG~pk~v~~s--~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 102 (240)
+.++++|||||||.||+|.++ |.++..............+.+..+|+++..+|++|.+++.. ....+..|+++++.+
T Consensus 149 ~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~-~~~~~~~g~~~~~~~ 227 (501)
T PRK13390 149 CGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRW-CSMVHALGGTVVLAK 227 (501)
T ss_pred ccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHH-HHHHHhcCceEEEcC
Confidence 569999999999999999964 44443221110000001335688999999999999988752 334567899999988
Q ss_pred CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCC--CCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccc
Q 039504 103 KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV--ADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTE 180 (240)
Q Consensus 103 ~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE 180 (240)
.+++..+++.+++++++++.++|+++..+...... ....++++|.++.+|+++++++.+.+++.+ +..+++.||+||
T Consensus 228 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~YG~tE 306 (501)
T PRK13390 228 RFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL-GPIVYEYYSSTE 306 (501)
T ss_pred CcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc-CCceeeeecccc
Confidence 89999999999999999999999999998875432 234567899999999999999999999988 678999999999
Q ss_pred cccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 181 AGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
++.++.... .......+++|+|.++ .++|+| +++++++.|++|||+|+|+.++
T Consensus 307 ~~~~~~~~~----~~~~~~~~~~G~~~~g-~~~i~d-~~~~~~~~g~~Gel~v~~~~~~ 359 (501)
T PRK13390 307 AHGMTFIDS----PDWLAHPGSVGRSVLG-DLHICD-DDGNELPAGRIGTVYFERDRLP 359 (501)
T ss_pred cCceEEecc----hhhccCCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecCCcc
Confidence 986443221 1112345689999999 799999 7789999999999999999875
No 101
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97 E-value=5.9e-31 Score=201.11 Aligned_cols=215 Identities=28% Similarity=0.381 Sum_probs=188.5
Q ss_pred CCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhH-HHHHHHhhc
Q 039504 16 IPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLN-SVLLCSLRA 94 (240)
Q Consensus 16 ~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~-~~~~~~l~~ 94 (240)
.+..+.+++++++...+.||||.||.++.+|.....+++.... .+++.+.+++++.+|..|-+.+. -..+..+..
T Consensus 181 ~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaE----iC~~~~~tvyL~~LP~AHNfplssPG~LGv~~a 256 (542)
T COG1021 181 TPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAE----ICGFDQQTVYLCALPAAHNFPLSSPGALGVFLA 256 (542)
T ss_pred CcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhh----hhCcCccceEEEecccccCCCCCCcchhheeee
Confidence 3456778889999999999999999999999998887766555 88999999999999999987765 346788999
Q ss_pred CceEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccc
Q 039504 95 GAGVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQ 174 (240)
Q Consensus 95 G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~ 174 (240)
|+++|+.++.+++..+.+|+++++|+...+|.....+++.++.....+++||++-+||..+++.+.+++...+ ++.+-.
T Consensus 257 gG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQQ 335 (542)
T COG1021 257 GGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVL-GCQLQQ 335 (542)
T ss_pred ccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhh-CchHHH
Confidence 9999999999999999999999999999999999999999999899999999999999999999999999999 999999
Q ss_pred cccccccccchhhccCCCCCCCCCCCCcccccc-CCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 175 GYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVV-RNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 175 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
.|||+|.-. |....+++........|+|+ |.-+++|+| ++|++|++||+|+|.++||-.++
T Consensus 336 VFGMAEGLv----nyTRLDDp~E~i~~TQGrPlsP~DEvrvvD-~dg~pv~pGE~G~LltRGPYTir 397 (542)
T COG1021 336 VFGMAEGLV----NYTRLDDPPEIIIHTQGRPLSPDDEVRVVD-ADGNPVAPGEVGELLTRGPYTIR 397 (542)
T ss_pred Hhhhhhhhh----cccccCCchHheeecCCCcCCCcceeEEec-CCCCCCCCCCcceeeecCCeeee
Confidence 999999853 21123333444557889999 788899999 77999999999999999997553
No 102
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.97 E-value=5e-29 Score=208.18 Aligned_cols=210 Identities=30% Similarity=0.434 Sum_probs=167.5
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHH--hhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVA--QQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~--~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
..++.++++|||||||.||+|.+++.++..... ..............++++++..|++|..++. ..+.++..|++++
T Consensus 138 ~~~~~a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~-~~~~~~~~g~~~~ 216 (502)
T PRK08276 138 DETAGADMLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLR-FGMSALALGGTVV 216 (502)
T ss_pred CCCcceEEEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHH-HHHHHHhccceEE
Confidence 456789999999999999999988766543221 1111000011235678999999999998876 4567899999999
Q ss_pred EccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCC--CCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccc
Q 039504 100 LMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV--ADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYG 177 (240)
Q Consensus 100 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 177 (240)
+.+.+++..+++.++++++|++.++|+++..+.+.... ...+++++|.++++|++++.++.+++.+.+ +..+++.||
T Consensus 217 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG 295 (502)
T PRK08276 217 VMEKFDAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYA 295 (502)
T ss_pred EcCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcc
Confidence 98889999999999999999999999999999886543 234578999999999999999999999988 788999999
Q ss_pred ccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 178 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 178 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
+||++.++.... .......+++|+|+ +..++|+| +++++++.|+.|||+|+|+.++
T Consensus 296 ~tE~~~~~~~~~----~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~ 351 (502)
T PRK08276 296 SSEGGGVTVITS----EDWLAHPGSVGKAV-LGEVRILD-EDGNELPPGEIGTVYFEMDGYP 351 (502)
T ss_pred cccccceeEecC----ccccccCCCcceec-ccEEEEEC-CCCCCCcCCCceEEEEECCCcc
Confidence 999987554431 12223456889999 88999999 5689999999999999998765
No 103
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.97 E-value=2.7e-29 Score=211.74 Aligned_cols=216 Identities=27% Similarity=0.350 Sum_probs=169.3
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCC-cEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNG-DVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~-d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
....++++++++|||||||.||++.++|.++......... ..++.++ |++++.+|++|..++...++.++..|++
T Consensus 147 ~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~ 222 (545)
T PRK07768 147 VETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFV----AAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAE 222 (545)
T ss_pred CCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHH----hcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCce
Confidence 3456789999999999999999999999999887766555 3345665 8999999999999988667788999999
Q ss_pred EEEccC----CCHHHHHHHHHhccceeeeechHHHHHHHhCC----CCCCCCccchhhhhccCCCCCHHHHHHHHHh---
Q 039504 98 VLLMQK----FEIGALLELIQRHRVSVAAVVPPLVLALAKNP----MVADYDLSSIRVVLSGAAPLGKELEDALRSR--- 166 (240)
Q Consensus 98 ~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~----~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~--- 166 (240)
++..++ .++..+++.+++++++++.+.|..+..+.... .....+++++|.++.+|+++++++.+++.+.
T Consensus 223 ~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~ 302 (545)
T PRK07768 223 LVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGAR 302 (545)
T ss_pred EEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHh
Confidence 888754 37888999999999999877777766655432 1223567789999999999999999999874
Q ss_pred C--CCCcccccccccccccchhhccCCCC---------------------CCCCCCCCccccccCCceEEEeeCCCCCCC
Q 039504 167 V--PQAILGQGYGMTEAGPVLSMCLGFAK---------------------QPFPTKSGSCGTVVRNAELKVIDPETGASL 223 (240)
Q Consensus 167 ~--~~~~i~~~yG~tE~~~~~~~~~~~~~---------------------~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~ 223 (240)
| +...+++.||+||++..+........ ........++|+|.++++++|+| ++++++
T Consensus 303 ~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~ 381 (545)
T PRK07768 303 FGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVL 381 (545)
T ss_pred cCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCC
Confidence 4 12359999999999865543211100 00012345799999999999999 678999
Q ss_pred CCCCCceEEEeCCCCC
Q 039504 224 PHNQPGEICIRGPQIM 239 (240)
Q Consensus 224 ~~g~~Gel~v~~~~~~ 239 (240)
++|+.|||+|+|+.++
T Consensus 382 ~~g~~Gel~v~~~~~~ 397 (545)
T PRK07768 382 PPRGVGVIELRGESVT 397 (545)
T ss_pred CCCCEEEEEEccCccc
Confidence 9999999999998876
No 104
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.97 E-value=1.3e-29 Score=207.14 Aligned_cols=206 Identities=22% Similarity=0.254 Sum_probs=157.5
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
..++++++.+++||||||.||++.++|.++..........+. .++++++|++++..++.+..+.+...+.++..|++++
T Consensus 71 ~~~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~-~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 149 (422)
T TIGR02155 71 AVPREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIR-AAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVV 149 (422)
T ss_pred CCChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHH-HcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEE
Confidence 345677889999999999999999999998665433222111 3477899999887665544444434567788899998
Q ss_pred EccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCC--ccchhhhhccCCCCCHHHHHHHHHhCCCCccccccc
Q 039504 100 LMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYD--LSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYG 177 (240)
Q Consensus 100 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~--~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 177 (240)
..+..+++.+++.|++++++++.++|+++..|++.....+.. ..++|.++++||++++++++.+++.| ++++++.||
T Consensus 150 ~~~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG 228 (422)
T TIGR02155 150 PISGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYG 228 (422)
T ss_pred ecCCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEeccc
Confidence 887778899999999999999999999999988754433322 34799999999999999999999999 789999999
Q ss_pred cccccc--chhhccCCCCCCCCCCCCcccccc--CCceEEEeeCCCCCCCCCCCCceEEEeCCC
Q 039504 178 MTEAGP--VLSMCLGFAKQPFPTKSGSCGTVV--RNAELKVIDPETGASLPHNQPGEICIRGPQ 237 (240)
Q Consensus 178 ~tE~~~--~~~~~~~~~~~~~~~~~~~~G~~~--~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~ 237 (240)
+||++. +...|. . ...|.+. +.+.++|+|+++++++++|+.|||++++..
T Consensus 229 ~tE~~~~~~~~~~~-------~---~~~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~~ 282 (422)
T TIGR02155 229 LSEVIGPGVAMECV-------E---TQDGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTLT 282 (422)
T ss_pred chhhcCCceeeccc-------c---cCCCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecCC
Confidence 999852 222220 0 0112333 357788999889999999999999999743
No 105
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.97 E-value=3e-29 Score=212.77 Aligned_cols=218 Identities=27% Similarity=0.396 Sum_probs=167.9
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....++++++++|||||||.||+|.++|.++.......... .+++.++|+++..+|++|.+++...++.++..|.++
T Consensus 171 ~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~ 247 (579)
T PRK09192 171 PRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHD---GLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSV 247 (579)
T ss_pred CCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhh---cccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCee
Confidence 34567899999999999999999999999998877655431 346788999999999999999887778888999888
Q ss_pred EEccC----CCHHHHHHHHHhccceeeeechHHHHHHHhCCC---CCCCCccchhhhhccCCCCCHHHHHHHHHhCCC--
Q 039504 99 LLMQK----FEIGALLELIQRHRVSVAAVVPPLVLALAKNPM---VADYDLSSIRVVLSGAAPLGKELEDALRSRVPQ-- 169 (240)
Q Consensus 99 v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~---~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~-- 169 (240)
++... .++..+++.+.+++++++...|..+..+..... ....+++++|.+++||+++++++.+.+.+.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g 327 (579)
T PRK09192 248 DYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAG 327 (579)
T ss_pred EeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHHHHhcC
Confidence 77642 378899999999999977765554544443221 123467789999999999999999999987731
Q ss_pred ---CcccccccccccccchhhccCCCCC---------------------CC--CCCCCccccccCCceEEEeeCCCCCCC
Q 039504 170 ---AILGQGYGMTEAGPVLSMCLGFAKQ---------------------PF--PTKSGSCGTVVRNAELKVIDPETGASL 223 (240)
Q Consensus 170 ---~~i~~~yG~tE~~~~~~~~~~~~~~---------------------~~--~~~~~~~G~~~~~~~v~i~d~~~~~~~ 223 (240)
..+++.||+||++..+......... .. .....++|++.|+++++|+| ++++++
T Consensus 328 ~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~~~~~~ 406 (579)
T PRK09192 328 FDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN-EAGMPL 406 (579)
T ss_pred CChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC-CCCCCC
Confidence 3589999999997655433110000 00 01124789999999999999 568999
Q ss_pred CCCCCceEEEeCCCCCC
Q 039504 224 PHNQPGEICIRGPQIMK 240 (240)
Q Consensus 224 ~~g~~Gel~v~~~~~~~ 240 (240)
+.|+.|||+|+|+.+++
T Consensus 407 ~~g~~Gel~i~g~~~~~ 423 (579)
T PRK09192 407 PERVVGHICVRGPSLMS 423 (579)
T ss_pred CCCCEEEEEecCCchhh
Confidence 99999999999998763
No 106
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.97 E-value=1.1e-28 Score=210.12 Aligned_cols=207 Identities=23% Similarity=0.282 Sum_probs=163.4
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....++++++++|||||||.||+|.++|.++......... .+.++++|+++..+|++|.+++...++.++..|+++
T Consensus 194 ~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~----~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~ 269 (600)
T PRK08279 194 SGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGG----LLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATL 269 (600)
T ss_pred cCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHH----hcCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEE
Confidence 3456789999999999999999999999999988877665 456789999999999999999987778889999999
Q ss_pred EEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 99 LLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 99 v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
++.+.+++..+++.++++++|++.++|++++.+............++|. ++|+++++++.+++.+.|+..++++.||+
T Consensus 270 v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~--~~g~~l~~~~~~~~~~~~~~~~l~~~YG~ 347 (600)
T PRK08279 270 ALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRL--MIGNGLRPDIWDEFQQRFGIPRILEFYAA 347 (600)
T ss_pred EEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeE--EecCCCCHHHHHHHHHHhCcceeeeeecc
Confidence 9999999999999999999999999999999998865544444455664 45778999999999999966679999999
Q ss_pred cccccchhhccCCCCCCCCCCCCccccccC----CceEEEeeCCCC----------CCCCCCCCceEE--EeCCCCC
Q 039504 179 TEAGPVLSMCLGFAKQPFPTKSGSCGTVVR----NAELKVIDPETG----------ASLPHNQPGEIC--IRGPQIM 239 (240)
Q Consensus 179 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~----~~~v~i~d~~~~----------~~~~~g~~Gel~--v~~~~~~ 239 (240)
||++..+... ....+++|++.+ ...+...|++.+ .+++.|+.|||+ |.++.++
T Consensus 348 tE~~~~~~~~--------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~ 416 (600)
T PRK08279 348 SEGNVGFINV--------FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPF 416 (600)
T ss_pred cccceeeccc--------CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCcccc
Confidence 9987533211 123456676666 333332232222 357889999998 6677665
No 107
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.97 E-value=2.6e-29 Score=206.85 Aligned_cols=196 Identities=23% Similarity=0.309 Sum_probs=152.0
Q ss_pred CCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEE
Q 039504 21 IEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL 100 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 100 (240)
..++++++++|||||||.||+|.++|+++.......... +++.+ ++.++.+|++|.+|+. .++.++..|+++++
T Consensus 117 ~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~~~~~~~~----~~~~~-~~~~~~~Pl~h~~g~~-~~~~~l~~G~t~v~ 190 (452)
T PRK07445 117 PNLETGWIMIPTGGSSGQIRFAIHTWETLTASVQGFQRY----FQLQQ-VNSFCVLPLYHVSGLM-QFMRSFLTGGKLVI 190 (452)
T ss_pred CCCCCcEEEEeCCCCCCCCcEEEechHHHHHHHHHHHHH----hcCCC-CceEeccCchhhhhHH-HHHHHHHcCCeEEE
Confidence 456889999999999999999999999988777655542 23444 4577889999999986 67788999999988
Q ss_pred ccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccc
Q 039504 101 MQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTE 180 (240)
Q Consensus 101 ~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE 180 (240)
.+..+.........+++++++..+|++++.+.+.. ...++++|.+++||+++++++.+++++ + ++++++.||+||
T Consensus 191 ~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~---~~~l~~l~~i~~gG~~l~~~~~~~~~~-~-~~~l~~~YG~TE 265 (452)
T PRK07445 191 LPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQLR---PQWLAQFRTILLGGAPAWPSLLEQARQ-L-QLRLAPTYGMTE 265 (452)
T ss_pred cChHhccchhhhhhhcCceEEEehHHHHHHHHhhC---hhhhhcceEEEECCccCCHHHHHHHHh-c-CCeEecCcchhh
Confidence 76433332334445788999999999999988632 234678999999999999999998876 4 789999999999
Q ss_pred cccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 181 AGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
++..+.... .........++|+|.|+++++|+ .|+.|||+|+||.++
T Consensus 266 ~~~~~~~~~---~~~~~~~~~~~G~~~p~~~v~i~---------~g~~Gel~v~g~~~~ 312 (452)
T PRK07445 266 TASQIATLK---PDDFLAGNNSSGQVLPHAQITIP---------ANQTGNITIQAQSLA 312 (452)
T ss_pred hcccccccC---chhhccCCCcCCccCCCCeEEEc---------CCCcceEEEeCCccc
Confidence 875543321 11112235678999999999997 367899999999876
No 108
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.96 E-value=2.9e-29 Score=205.63 Aligned_cols=205 Identities=20% Similarity=0.182 Sum_probs=156.8
Q ss_pred CCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 18 EVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
...++.++++.+++||||||.||++.++|.++........+.+. ..+++++|+++...+..+..+.....++++..|++
T Consensus 80 ~~~~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~-~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~ 158 (445)
T TIGR03335 80 FKSADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFV-SQGFTAGDRMVICASYGMNVGANTMTLAAREVGMS 158 (445)
T ss_pred cccCCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHH-HcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCE
Confidence 33455678889999999999999999999998766544332211 34788999999988877766655456777888988
Q ss_pred EEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCC--CccchhhhhccCCCCCHHHHHHHHHhCCCCccccc
Q 039504 98 VLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADY--DLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQG 175 (240)
Q Consensus 98 ~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~--~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 175 (240)
++.... ....++++++++++.+.++|+.+..|++.....+. ...++|.++++||++++++++++.+.| ++++++.
T Consensus 159 vi~~~~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~ 235 (445)
T TIGR03335 159 IIPEGK--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNT 235 (445)
T ss_pred EEcCCc--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEec
Confidence 765443 34678999999999999999998888765443332 235899999999999999999999999 7999999
Q ss_pred ccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCC
Q 039504 176 YGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGP 236 (240)
Q Consensus 176 yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 236 (240)
||+||++ ++..|. .......+.+++.++|+|+++++++|+|+.|||+|+.-
T Consensus 236 YG~TE~~-~~~~c~---------~~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L 286 (445)
T TIGR03335 236 YGSTEGT-MCGECQ---------AVAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTL 286 (445)
T ss_pred CChhhhh-heEEec---------CCCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEec
Confidence 9999986 323331 01112233356889999999899999999999999864
No 109
>PLN02479 acetate-CoA ligase
Probab=99.96 E-value=2.4e-28 Score=206.76 Aligned_cols=211 Identities=22% Similarity=0.311 Sum_probs=160.2
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.+++.++++|||||||.||+|.++|+++......... .+++.++++++..+|++|.+++...+...+..|.++ ..
T Consensus 193 ~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~~~g~~~-~~ 267 (567)
T PLN02479 193 DEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNAL----IWGMNEGAVYLWTLPMFHCNGWCFTWTLAALCGTNI-CL 267 (567)
T ss_pred CcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHh----hcCCCCCCEEEEecchhhhhhHHHHHHHHhhcCceE-ec
Confidence 3456788999999999999999999998665443332 335678899999999999988764444556666555 44
Q ss_pred cCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCC-CCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccc
Q 039504 102 QKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVAD-YDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTE 180 (240)
Q Consensus 102 ~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~-~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE 180 (240)
..+++..+++.++++++|++..+|++++.|.+...... ..++++|.++.+|+++++++.+++.+. +.++++.||+||
T Consensus 268 ~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~yG~tE 345 (567)
T PLN02479 268 RQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAMSEK--GFRVTHTYGLSE 345 (567)
T ss_pred cCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHHHHhc--CCceeccccccc
Confidence 67899999999999999999999999999987654332 256788999999999999999999875 788999999999
Q ss_pred cccchhhccCCC---C---CCCCCCCCccccccCCce-EEEeeCCCCCCCCCC--CCceEEEeCCCCC
Q 039504 181 AGPVLSMCLGFA---K---QPFPTKSGSCGTVVRNAE-LKVIDPETGASLPHN--QPGEICIRGPQIM 239 (240)
Q Consensus 181 ~~~~~~~~~~~~---~---~~~~~~~~~~G~~~~~~~-v~i~d~~~~~~~~~g--~~Gel~v~~~~~~ 239 (240)
++..+..+.... . ..........|.+.++.. ++|+|++++++++.+ ++|||+|+|+.++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~ 413 (567)
T PLN02479 346 TYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNMVM 413 (567)
T ss_pred ccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEeccchh
Confidence 864433221000 0 000011235678888876 899998888888764 6799999998765
No 110
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.96 E-value=3.2e-28 Score=206.34 Aligned_cols=211 Identities=27% Similarity=0.365 Sum_probs=157.7
Q ss_pred CCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEE
Q 039504 21 IEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL 100 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 100 (240)
..++|+++++|||||||.||+|.++|.++......... ...+...++++..+|++|..++. ..+.++..|+++++
T Consensus 183 ~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~pl~h~~g~~-~~~~~~~~g~~~v~ 257 (579)
T PLN03102 183 QDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAII----GWEMGTCPVYLWTLPMFHCNGWT-FTWGTAARGGTSVC 257 (579)
T ss_pred CCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHh----hcCCCCCCeEEecCChhhhcchh-HHHHHHHhcCcEEe
Confidence 45689999999999999999999999997544333222 22345677888999999998887 45667888889888
Q ss_pred ccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccccc
Q 039504 101 MQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTE 180 (240)
Q Consensus 101 ~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE 180 (240)
.+++++..+++.|+++++|++.++|+++..|.+.........++++.+++||+++++.+.+++++ + +.++++.||+||
T Consensus 258 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~-g~~i~~~YG~tE 335 (579)
T PLN03102 258 MRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L-GFQVMHAYGLTE 335 (579)
T ss_pred eccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c-CCeEEeecCccc
Confidence 88889999999999999999999999999998865443334456788999999999999999876 5 789999999999
Q ss_pred cccchhhccCCC-----CCC-C---CCCCCccccccCCceEEEeeCCCCCCCCC--CCCceEEEeCCCCCC
Q 039504 181 AGPVLSMCLGFA-----KQP-F---PTKSGSCGTVVRNAELKVIDPETGASLPH--NQPGEICIRGPQIMK 240 (240)
Q Consensus 181 ~~~~~~~~~~~~-----~~~-~---~~~~~~~G~~~~~~~v~i~d~~~~~~~~~--g~~Gel~v~~~~~~~ 240 (240)
++..+..+.... ... . ....+..+.+. ..++++|++++++++. ++.|||+|+||.+++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~v~i~~~~~~~~v~~~~~~~GEl~v~g~~~~~ 404 (579)
T PLN03102 336 ATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGL--ADVDVKNKETQESVPRDGKTMGEIVIKGSSIMK 404 (579)
T ss_pred cCccccccccccccccCCcccccccccCCCcccccc--cceEEeccccccccCCCCCCceEEEEECcchhh
Confidence 986543321000 000 0 00112222233 3567777777888875 368999999998763
No 111
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.96 E-value=3.6e-28 Score=198.41 Aligned_cols=193 Identities=21% Similarity=0.271 Sum_probs=161.8
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++++++++|||||||.||+|.++|.++......+.. .+....+|+.+..+|++|.+++...++.++..|++++
T Consensus 97 ~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~ 172 (414)
T PRK08308 97 NYLAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNE----ALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPV 172 (414)
T ss_pred CCCCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHH----hhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEE
Confidence 346789999999999999999999999999887776655 3456788999999999999998767889999999999
Q ss_pred EccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccc
Q 039504 100 LMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 100 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 179 (240)
+.+..++..+++.+++++++++.++|+++..+.+..... .+++.++.+|+++++++.+++++. ..++++.||+|
T Consensus 173 ~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~----~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~t 246 (414)
T PRK08308 173 IITNKNPKFALNILRNTPQHILYAVPLMLHILGRLLPGT----FQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCS 246 (414)
T ss_pred ecCCCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCcc----ccccEEEEccCCCCHHHHHHHHHh--CChhhhccCcc
Confidence 998899999999999999999999999999998765321 367889999999999999999987 46899999999
Q ss_pred ccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCC
Q 039504 180 EAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGP 236 (240)
Q Consensus 180 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 236 (240)
|++.+.... .......+|+|+|++++++.+ + .+++|||++++.
T Consensus 247 E~~~~~~~~-------~~~~~~~~G~p~~~~~~~~~~-~------~~~~gel~v~~~ 289 (414)
T PRK08308 247 EAGCVSICP-------DMKSHLDLGNPLPHVSVSAGS-D------ENAPEEIVVKMG 289 (414)
T ss_pred ccCCeeecC-------CCCCCCccCccCCCeEEEEec-C------CCCCceEEEEcC
Confidence 998543211 122456799999999999876 2 367799998754
No 112
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.96 E-value=4.4e-28 Score=202.95 Aligned_cols=202 Identities=27% Similarity=0.411 Sum_probs=162.9
Q ss_pred CCCcEEEecCCCCCCCCceeeee--hHHHHHHH---HhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 23 PDDPVALPFSSGTTGLPKGVVLT--HKSLITSV---AQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 23 ~~~~~~i~~TSGtTG~pk~v~~s--~~~l~~~~---~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
..+.+.++|||||||.||+|.++ |.++.... ..... .+.+.++++++...|++|..++. ..+.++..|++
T Consensus 153 ~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~h~~~~~-~~~~~~~~g~~ 227 (511)
T PRK13391 153 ESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQR----LWGFRSDMVYLSPAPLYHSAPQR-AVMLVIRLGGT 227 (511)
T ss_pred cccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHH----hcCCCCCCeEEEcCCHHHHHHHH-HHHHHHHcCce
Confidence 34578999999999999999954 55543222 11122 34567889999999999998886 56778899999
Q ss_pred EEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCC--CCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccc
Q 039504 98 VLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMV--ADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQG 175 (240)
Q Consensus 98 ~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 175 (240)
+++.+.+++..+++.++++++|++..+|+++..+.+.... ....++++|.+++||+++++++.+++++.+ +..+++.
T Consensus 228 ~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-g~~v~~~ 306 (511)
T PRK13391 228 VIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW-GPIIHEY 306 (511)
T ss_pred EEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHc-CCceeee
Confidence 9999889999999999999999999999999988765432 223467899999999999999999999988 6889999
Q ss_pred ccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCC
Q 039504 176 YGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGP 236 (240)
Q Consensus 176 yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 236 (240)
||+||++.+..... ......++++|+|.++ .++|+| +++++++.|+.|||+++|+
T Consensus 307 YG~tE~~~~~~~~~----~~~~~~~~~vG~~~~g-~~~i~d-~~~~~~~~g~~Gel~~~g~ 361 (511)
T PRK13391 307 YAATEGLGFTACDS----EEWLAHPGTVGRAMFG-DLHILD-DDGAELPPGEPGTIWFEGG 361 (511)
T ss_pred eccccccceEEecC----ccccccCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecC
Confidence 99999986544321 1122345789999999 689999 6799999999999999998
No 113
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.96 E-value=1.5e-28 Score=201.85 Aligned_cols=227 Identities=26% Similarity=0.379 Sum_probs=192.0
Q ss_pred chhhHhhcCCCCCCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhh
Q 039504 4 HFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYS 83 (240)
Q Consensus 4 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g 83 (240)
.+++..+...+..++..++.+|+.+|+|||||||.||++.+++...........+ ..++..++|++++.....|+.+
T Consensus 219 ~~~~~~~~a~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~---~~~d~q~~dv~~~~~d~GWi~g 295 (626)
T KOG1175|consen 219 FWSLELKKASPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSR---YHFDLQPSDVLWCASDLGWITG 295 (626)
T ss_pred cHHHHhhhcCCCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcc---eeccCCCcceEEEecccCeeec
Confidence 4566666667777788999999999999999999999999999876554433332 2567899999999999999999
Q ss_pred hHHHHHHHhhcCceEEEcc--CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCC--CCccchhhhhccCCCCCHHH
Q 039504 84 LNSVLLCSLRAGAGVLLMQ--KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVAD--YDLSSIRVVLSGAAPLGKEL 159 (240)
Q Consensus 84 ~~~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~--~~~~~lr~v~~~G~~~~~~~ 159 (240)
.+..++.++..|+++++.. ++++..+++.+.++++|++.+.|+.++.+.+...... .++++||.+.+.||++.++.
T Consensus 296 ~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~ 375 (626)
T KOG1175|consen 296 HSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEA 375 (626)
T ss_pred cchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcch
Confidence 9988899999999999975 4699999999999999999999999998877655433 44467999999999999999
Q ss_pred HHHHHHhCCCCcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCC-CCceEEEeCCC
Q 039504 160 EDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHN-QPGEICIRGPQ 237 (240)
Q Consensus 160 ~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g-~~Gel~v~~~~ 237 (240)
.+++.+.+....|++.||+||++..++.+..... +..+++.+.|.+++++.|+| ++|++++.+ +.|+|+++.|.
T Consensus 376 ~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~---p~~pg~~~~p~~g~~v~i~d-e~g~~~~~~~~~G~l~~~~~~ 450 (626)
T KOG1175|consen 376 WEWWKRVTGLDPIYETYGQTETGGICITPKPGKL---PIKPGSAGKPFPGYDVQILD-ENGNELPPSTGNGELRLKPPW 450 (626)
T ss_pred HHHHHHhcCccchhhceeeeccCceeeeccCCCC---CcCccccCCCCCCcceEEEC-CCCCCcCCCCceeEEEEeCCC
Confidence 9999999943369999999999998887633221 57789999999999999999 579999877 89999999764
No 114
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.96 E-value=8.2e-28 Score=197.51 Aligned_cols=197 Identities=28% Similarity=0.408 Sum_probs=162.0
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
....+++++++|||||||.||++.++|.++......... .++++++|+++..+|++|.+++. .++.++..|++++
T Consensus 107 ~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~-~~~~~l~~g~~~~ 181 (436)
T TIGR01923 107 SFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKE----NLGFTEDDNWLLSLPLYHISGLS-ILFRWLIEGATLR 181 (436)
T ss_pred cCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHh----hcCCCCCceEEEccCcHhHHHHH-HHHHHHhcCceEE
Confidence 455688999999999999999999999999887776665 45688999999999999998886 6789999999999
Q ss_pred EccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccc
Q 039504 100 LMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 100 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 179 (240)
+.+.++ .+++.+++++++++.++|+++..+.+..... +++|.++++|+++++++.+.+++. +..+++.||+|
T Consensus 182 ~~~~~~--~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~----~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~t 253 (436)
T TIGR01923 182 IVDKFN--QLLEMIANERVTHISLVPTQLNRLLDEGGHN----ENLRKILLGGSAIPAPLIEEAQQY--GLPIYLSYGMT 253 (436)
T ss_pred ecchHH--HHHHHHHHhCCeEEEeHHHHHHHHHhCcCCC----CceEEEEECCCCCCHHHHHHHHHh--CCceeeEecCC
Confidence 987654 8999999999999999999999998875432 679999999999999999988764 88999999999
Q ss_pred ccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 180 EAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 180 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
|++..+..... .... ...++|+|+++++++|.+.+. ++.|||+|+|+.++
T Consensus 254 E~~~~~~~~~~---~~~~-~~~~~G~~~~~~~~~i~~~~~------~~~Gel~v~~~~~~ 303 (436)
T TIGR01923 254 ETCSQVTTATP---EMLH-ARPDVGRPLAGREIKIKVDNK------EGHGEIMVKGANLM 303 (436)
T ss_pred ccchhccCcCc---cccc-cccCCCccCCCcEEEEEeCCC------CCceEEEEECCccc
Confidence 99876554321 1111 122489999999999844121 37899999998765
No 115
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.96 E-value=3.7e-28 Score=206.18 Aligned_cols=219 Identities=19% Similarity=0.307 Sum_probs=160.3
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCc--cccCCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNL--YLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
...++|+++++|||||||.||+|.++|.++..........+.... ....++++++.+|++|..|+...++.+++.|++
T Consensus 156 ~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~ 235 (578)
T PRK05850 156 PRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVCAPILGGCP 235 (578)
T ss_pred CCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHHHHHhcCCc
Confidence 356789999999999999999999999999877655433211110 135678999999999999988678999999999
Q ss_pred EEEccC----CCHHHHHHHHHhccceeeeechHHHHHHH-hCCC---CCCCCccchhhhhccCCCCCHHHHHHHHHhCC-
Q 039504 98 VLLMQK----FEIGALLELIQRHRVSVAAVVPPLVLALA-KNPM---VADYDLSSIRVVLSGAAPLGKELEDALRSRVP- 168 (240)
Q Consensus 98 ~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~-~~~~---~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~- 168 (240)
+++.++ .++..+++.++++++++. .+|.++..+. .... .....++++|.++.||+++++++.+++.+.|+
T Consensus 236 ~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~ 314 (578)
T PRK05850 236 AVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVHPATLKRFADRFAP 314 (578)
T ss_pred EEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCCHHHHHHHHHHHHh
Confidence 988764 378999999999999854 6666544333 2211 12335678999999999999999999998773
Q ss_pred ----CCcccccccccccccchhhccCCCCC-----------CC---------CCCCCccccccCCceEEEeeCCCCCCCC
Q 039504 169 ----QAILGQGYGMTEAGPVLSMCLGFAKQ-----------PF---------PTKSGSCGTVVRNAELKVIDPETGASLP 224 (240)
Q Consensus 169 ----~~~i~~~yG~tE~~~~~~~~~~~~~~-----------~~---------~~~~~~~G~~~~~~~v~i~d~~~~~~~~ 224 (240)
+..+++.||+||++..+......... .. .......|.|. +.+++|+|++++++++
T Consensus 315 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~ 393 (578)
T PRK05850 315 FNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDPDTCIECP 393 (578)
T ss_pred cCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcCCCCcCCC
Confidence 34689999999987543322100000 00 00011334443 5789999988889999
Q ss_pred CCCCceEEEeCCCCCC
Q 039504 225 HNQPGEICIRGPQIMK 240 (240)
Q Consensus 225 ~g~~Gel~v~~~~~~~ 240 (240)
.|+.|||+|+|+.+++
T Consensus 394 ~g~~Gel~v~g~~~~~ 409 (578)
T PRK05850 394 AGTVGEIWVHGDNVAA 409 (578)
T ss_pred CCCEEEEEEecCcccc
Confidence 9999999999998874
No 116
>PRK08162 acyl-CoA synthetase; Validated
Probab=99.96 E-value=4.5e-27 Score=198.27 Aligned_cols=211 Identities=23% Similarity=0.293 Sum_probs=157.0
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
+..+.++++|||||||.||++.++|.++......... .+.+..+++++..+|++|..++...++..+ .|+..+..
T Consensus 180 ~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~----~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~-~~g~~~~~ 254 (545)
T PRK08162 180 DEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNIL----AWGMPKHPVYLWTLPMFHCNGWCFPWTVAA-RAGTNVCL 254 (545)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH----hcCCCCCCeeEeccCcHhhhhHHHHHHHHH-HccEEEEe
Confidence 3457899999999999999999999987665544333 234677889999999999988864444444 45555555
Q ss_pred cCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccccc
Q 039504 102 QKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEA 181 (240)
Q Consensus 102 ~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~ 181 (240)
..+++..+++.++++++|++.++|++++.|.+........+...+.++++|+++++++.+.+++. ++++++.||+||+
T Consensus 255 ~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~ 332 (545)
T PRK08162 255 RKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHVYGLTET 332 (545)
T ss_pred CCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceeeccccccc
Confidence 67899999999999999999999999999998655444444556667889999999999998774 7899999999998
Q ss_pred ccchhhccCCCC-C-----CCCCCCCccccccCC-ceEEEeeCCCCCCCCCC--CCceEEEeCCCCC
Q 039504 182 GPVLSMCLGFAK-Q-----PFPTKSGSCGTVVRN-AELKVIDPETGASLPHN--QPGEICIRGPQIM 239 (240)
Q Consensus 182 ~~~~~~~~~~~~-~-----~~~~~~~~~G~~~~~-~~v~i~d~~~~~~~~~g--~~Gel~v~~~~~~ 239 (240)
+..+..+..... . .......+.|.+.+. ..++|+|++++++++.+ +.|||+|+|+.++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~ 399 (545)
T PRK08162 333 YGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVM 399 (545)
T ss_pred CcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcch
Confidence 654443321100 0 001122455666553 35789998888999763 4699999998875
No 117
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.95 E-value=3.8e-27 Score=209.45 Aligned_cols=203 Identities=18% Similarity=0.221 Sum_probs=158.3
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.++|+++|+|| ||||.||++.++|.+.......... .+.+.++|++++.+|++|.+++...++.++..|.++++.
T Consensus 604 ~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~----~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~ 678 (994)
T PRK07868 604 LARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTAS----AAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSRIALS 678 (994)
T ss_pred CCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhh----hcCCCCCCeEEEecChHHHhHHHHHHHHHhccceEEEec
Confidence 36889999998 5777777777787665443332222 346788999999999999999986667778888888888
Q ss_pred cCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccccc
Q 039504 102 QKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEA 181 (240)
Q Consensus 102 ~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~ 181 (240)
+.++++.+++.|+++++|++.++|++++.|.+........++++|.++ |+.+++++.+++.+.|+++++++.||+||+
T Consensus 679 ~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~ 756 (994)
T PRK07868 679 RGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVVEFFATTDG 756 (994)
T ss_pred CCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHhCchheeeeeecccc
Confidence 889999999999999999999999999999886544444567888765 345999999999999977899999999998
Q ss_pred ccchhhccCCCCCCCCCCCCccccccCCc-eEEEe--eC--------CCC--CCCCCCCCceEEEeCCCC
Q 039504 182 GPVLSMCLGFAKQPFPTKSGSCGTVVRNA-ELKVI--DP--------ETG--ASLPHNQPGEICIRGPQI 238 (240)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~v~i~--d~--------~~~--~~~~~g~~Gel~v~~~~~ 238 (240)
+...... .....+++|+|+|++ +++|. |+ ++| ++++.|+.|||+++++..
T Consensus 757 ~~~~~~~-------~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~ 819 (994)
T PRK07868 757 QAVLANV-------SGAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGP 819 (994)
T ss_pred ccccccc-------CCCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCCC
Confidence 7543211 123457899999997 56653 21 344 567899999999999854
No 118
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.95 E-value=2.8e-26 Score=192.87 Aligned_cols=222 Identities=23% Similarity=0.296 Sum_probs=162.7
Q ss_pred chhhHhhcCCCCCCCCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCC-----CCc------cccCCcEE
Q 039504 4 HFTVLSEADEDQIPEVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGEN-----PNL------YLTNGDVV 72 (240)
Q Consensus 4 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~-----~~~------~~~~~d~~ 72 (240)
+++++.+...+....... ..|.++++|||||||.||+|.++|.++............ ... ....++++
T Consensus 144 ~~~~~~~~~~~~~~~~~~-~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (533)
T PRK07798 144 DYEDALAAGSPERDFGER-SPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRR 222 (533)
T ss_pred cHHHHHhccCCcCCCCCC-CCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceE
Confidence 455555443322222222 345578999999999999999999998765433211100 011 11567899
Q ss_pred EEecchHHhhhhHHHHHHHhhcCceEEEcc--CCCHHHHHHHHHhccceeeeechHHHH-HHHhCCC-CCCCCccchhhh
Q 039504 73 LCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ--KFEIGALLELIQRHRVSVAAVVPPLVL-ALAKNPM-VADYDLSSIRVV 148 (240)
Q Consensus 73 l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~-~l~~~~~-~~~~~~~~lr~v 148 (240)
+..+|++|..+++ ..+.++..|+++++.+ .+++..+++.+++++++++.++|+.+. .+..... .....++++|.+
T Consensus 223 ~~~~pl~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i 301 (533)
T PRK07798 223 FPAPPLMHGAGQW-AAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAI 301 (533)
T ss_pred EEecchhhhhhHH-HHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEE
Confidence 9999999999997 6789999999999998 789999999999999999999986553 3333322 233456789999
Q ss_pred hccCCCCCHHHHHHHHHhCCCCcccccccccccccchhhccCCCCCCCCCCCCccc--cccCCceEEEeeCCCCCCCCCC
Q 039504 149 LSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCG--TVVRNAELKVIDPETGASLPHN 226 (240)
Q Consensus 149 ~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G--~~~~~~~v~i~d~~~~~~~~~g 226 (240)
++||+++++++.+++++.+++..+++.||+||++....... . ......| ++.++..++|+| +++++++.|
T Consensus 302 ~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~----~---~~~~~~g~~~~~~~~~~~i~~-~~~~~~~~g 373 (533)
T PRK07798 302 ASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTV----A---KGAVHTGGPRFTIGPRTVVLD-EDGNPVEPG 373 (533)
T ss_pred EECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCC----C---CCCccCCCCccCCCceEEEEC-CCCCCCCCC
Confidence 99999999999999999998889999999999965443321 0 1112233 788899999999 557799999
Q ss_pred CC--ceEEEeC
Q 039504 227 QP--GEICIRG 235 (240)
Q Consensus 227 ~~--Gel~v~~ 235 (240)
+. |+|++.+
T Consensus 374 ~~~~g~l~~~~ 384 (533)
T PRK07798 374 SGEIGWIARRG 384 (533)
T ss_pred CCCeeEEEeec
Confidence 88 7777544
No 119
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.95 E-value=4.6e-26 Score=188.34 Aligned_cols=186 Identities=28% Similarity=0.420 Sum_probs=152.7
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....++++++++|||||||.||+|.++|+++......... .+++.++|+++..+|++|.+++. .++.++..|+++
T Consensus 130 ~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~----~~~~~~~~~~l~~~p~~h~~g~~-~~~~~l~~G~~v 204 (458)
T PRK09029 130 VAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLS----LMPFTAQDSWLLSLPLFHVSGQG-IVWRWLYAGATL 204 (458)
T ss_pred ccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhh----cCCCCccceEEEecCcHhhhhhH-HHHHHHhCCceE
Confidence 3456788999999999999999999999999988776655 45678899999999999999986 667789999999
Q ss_pred EEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 99 LLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 99 v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
++.+. ..+++.+. +++.+..+|+++..+...... ..++|.+++||+++++.+.+.+.+. +.++++.||+
T Consensus 205 ~~~~~---~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~YG~ 273 (458)
T PRK09029 205 VVRDK---QPLEQALA--GCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGYGL 273 (458)
T ss_pred EeCCh---HHHHHHHh--hceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccccc
Confidence 98764 45666663 789999999999998876543 3479999999999999999998864 7899999999
Q ss_pred cccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 179 TEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 179 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
||++...... . .....++|+|++++.++|+| |||+|+|+.++
T Consensus 274 tE~~~~~~~~-----~--~~~~~~~G~~~~~~~~~i~~------------gel~v~g~~~~ 315 (458)
T PRK09029 274 TEMASTVCAK-----R--ADGLAGVGSPLPGREVKLVD------------GEIWLRGASLA 315 (458)
T ss_pred cccCcceecc-----C--CCCCCCCCCCCCCCEEEEeC------------CEEEEecCcee
Confidence 9998644321 1 11234689999999999987 89999998765
No 120
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.94 E-value=1.3e-25 Score=180.02 Aligned_cols=183 Identities=28% Similarity=0.355 Sum_probs=147.5
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVL 99 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 99 (240)
...++|+++++|||||||.||+|.++|.++.......... +...++++..+|++|..++. .++.++..|++.+
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~------~~~~~~~~~~~p~~~~~g~~-~~~~~l~~g~~~v 103 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDR------LGGPGQWLLALPAHHIAGLQ-VLVRSVIAGSEPV 103 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhc------cCCCCeEEEECChHHHHHHH-HHHHHHHcCCeEE
Confidence 3456899999999999999999999999998877655442 23456788899999999987 5677888888877
Q ss_pred E---ccCCCHHHHHHHHHhcc--ceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccc
Q 039504 100 L---MQKFEIGALLELIQRHR--VSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQ 174 (240)
Q Consensus 100 ~---~~~~~~~~~~~~i~~~~--~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~ 174 (240)
. ...+++..+++.+++++ .++...+|..+..+...... ...++++|.+++||+++++++.+++.+ + +.++++
T Consensus 104 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~-~~~~~~l~~i~~gG~~l~~~~~~~~~~-~-~~~v~~ 180 (358)
T PRK07824 104 ELDVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA-TAALAELDAVLVGGGPAPAPVLDAAAA-A-GINVVR 180 (358)
T ss_pred ecCcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc-cCCcccceEEEECCCCCCHHHHHHHHh-c-CCcEEe
Confidence 6 34589999999999998 45666788888777665432 245778999999999999999999886 4 789999
Q ss_pred cccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 175 GYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 175 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
.||+||++..+. ..|+|.++++++|.| |||+++|+.++
T Consensus 181 ~YG~TE~~~~~~---------------~~G~~~~g~~v~i~~------------Gei~v~g~~~~ 218 (358)
T PRK07824 181 TYGMSETSGGCV---------------YDGVPLDGVRVRVED------------GRIALGGPTLA 218 (358)
T ss_pred cccCCccCCCcC---------------cCceeCCCCEEEecC------------CEEEEecCccc
Confidence 999999874321 248899999999854 89999998875
No 121
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.94 E-value=2.9e-26 Score=180.81 Aligned_cols=207 Identities=24% Similarity=0.255 Sum_probs=166.3
Q ss_pred CCCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCce
Q 039504 18 EVAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG 97 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 97 (240)
...+.-++...|..||||||.|+.+.+++..+......+.+.+. ..+...+|++..+....--.|.....+++-..|++
T Consensus 84 ~~~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~-~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~ 162 (438)
T COG1541 84 DFAVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLY-SAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGAT 162 (438)
T ss_pred cccccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHH-HccCCCCCEEEEEeeeccccCCchhHHHHHhhCEE
Confidence 34555677777999999999999999999998877766655443 45788999888766532222222356777778998
Q ss_pred EEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCC--CCccchhhhhccCCCCCHHHHHHHHHhCCCCccccc
Q 039504 98 VLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVAD--YDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQG 175 (240)
Q Consensus 98 ~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~--~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 175 (240)
++...+.+.+..++++++++++++.++|+.+..|++.+++.+ ..-.++|.+++|+|++++++++.+.+.| ++.+++.
T Consensus 163 vip~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~di 241 (438)
T COG1541 163 VIPISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDI 241 (438)
T ss_pred EEccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeec
Confidence 888888889999999999999999999999999999888875 3334799999999999999999999999 8999999
Q ss_pred ccccccccch-hhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeC
Q 039504 176 YGMTEAGPVL-SMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRG 235 (240)
Q Consensus 176 yG~tE~~~~~-~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~ 235 (240)
||+||..+.. ..|.. ........+...++|+||++++.+++|+.|||+++.
T Consensus 242 YGltE~~g~g~~eC~~---------~~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~ 293 (438)
T COG1541 242 YGLTEGFGPGAGECTE---------RNGLHIWEDHFIFEIVDPETGEQLPDGERGELVITT 293 (438)
T ss_pred cccccccCCccccccc---------ccCCCcchhhceeeeecCCcCccCCCCCeeEEEEEe
Confidence 9999997663 33411 112233446788999999999999999999999984
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.93 E-value=7.8e-25 Score=175.76 Aligned_cols=169 Identities=19% Similarity=0.139 Sum_probs=132.4
Q ss_pred CCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCcccc--CCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 24 DDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLT--NGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 24 ~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~--~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
+..++++|||||||.||+|.++|.++.......... ++++ +.|++++++|++|++|+...++.++..|++++..
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~----~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~ 170 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKI----LGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQL 170 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHH----hCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEec
Confidence 346789999999999999999999998877665552 2343 3468999999999999876678888899999998
Q ss_pred cCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccccc
Q 039504 102 QKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEA 181 (240)
Q Consensus 102 ~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~ 181 (240)
..+++..+++.++.+ +++.++|++++.+.+.. ..++++|. +++|+++++++++.+++. +..++++.||+||+
T Consensus 171 ~~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt 242 (386)
T TIGR02372 171 AAAPASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATET 242 (386)
T ss_pred CCCChHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheeccccc
Confidence 888988888888754 78999999999997753 24566775 678999999999999885 23579999999999
Q ss_pred ccchhhccCCCCCCCCCCCCccccccCCceEEE
Q 039504 182 GPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKV 214 (240)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i 214 (240)
+++.... .+...|++.|++++.+
T Consensus 243 ~~i~~~~----------~~~~~~~~~p~~~~~~ 265 (386)
T TIGR02372 243 GGIGLRE----------APDDPFRLLPDLACFA 265 (386)
T ss_pred ccccccc----------CCCCCcccCCCccccC
Confidence 8654331 1223467778777654
No 123
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=99.93 E-value=1e-24 Score=173.66 Aligned_cols=201 Identities=27% Similarity=0.372 Sum_probs=164.8
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
...+-.+++..+|||||||.||..+++|.-.......... .++++++|+++..+|++|+.|....+-.++..|+++
T Consensus 237 ~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~----~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~ 312 (649)
T KOG1179|consen 237 SGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYY----VFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATV 312 (649)
T ss_pred CCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHH----HhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceE
Confidence 4456678999999999999999999999988776664544 568999999999999999999988899999999999
Q ss_pred EEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcccccccc
Q 039504 99 LLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGM 178 (240)
Q Consensus 99 v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 178 (240)
++-..|+...+|+-..+|++|++.-.-.+.++|..++..+.++-.++|+.+ |..+-++.++.+.++|+..+|.+.||+
T Consensus 313 VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE~Yga 390 (649)
T KOG1179|consen 313 VLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAY--GNGLRPDIWQQFVKRFGIIKIGEFYGA 390 (649)
T ss_pred EEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEe--cCCCCchHHHHHHHHcCCCeEEEEecc
Confidence 999999999999999999999999999999999999988877777888765 445999999999999966779999999
Q ss_pred cccccchhhccCCCCCCCCCCCCcccc------ccCCceEEEeeCCCCCC----------CCCCCCceEEE
Q 039504 179 TEAGPVLSMCLGFAKQPFPTKSGSCGT------VVRNAELKVIDPETGAS----------LPHNQPGEICI 233 (240)
Q Consensus 179 tE~~~~~~~~~~~~~~~~~~~~~~~G~------~~~~~~v~i~d~~~~~~----------~~~g~~Gel~v 233 (240)
||........ +..-+.+|. -+--+++.-+|++++++ |++||+|.++=
T Consensus 391 TEgn~~~~N~--------d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~ 453 (649)
T KOG1179|consen 391 TEGNSNLVNY--------DGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVG 453 (649)
T ss_pred ccCcceeeee--------cCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEE
Confidence 9997544332 112222222 22234555567788875 57899997653
No 124
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.91 E-value=8.8e-23 Score=175.40 Aligned_cols=211 Identities=27% Similarity=0.322 Sum_probs=170.8
Q ss_pred CCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEE
Q 039504 21 IEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL 100 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 100 (240)
..+++.+|++|||||||.||||..+|.++.+...+... .+.+..+|+++...++.+....+ .++.++..|+++++
T Consensus 363 ~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~----~~~~~~~d~~l~~~s~~fD~~~~-~~f~~l~~G~~l~~ 437 (642)
T COG1020 363 LLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGA----RFGLDADDRVLALASLSFDASVF-EIFGALLEGARLVL 437 (642)
T ss_pred CCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHH----hcCCCcccEEeecCCcccchhHH-HHHHHHhCCCEEEe
Confidence 45589999999999999999999999999886666655 35678899999988887766666 68899999999999
Q ss_pred ccC---CCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCC--CCccchhhhhccCCCCCHHHHHHHHHhCC-CCcccc
Q 039504 101 MQK---FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVAD--YDLSSIRVVLSGAAPLGKELEDALRSRVP-QAILGQ 174 (240)
Q Consensus 101 ~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~--~~~~~lr~v~~~G~~~~~~~~~~~~~~~~-~~~i~~ 174 (240)
... .++..+.+.+.+++++++..+|..+..+........ .....+|.+++||+.++..+..++....+ ...+++
T Consensus 438 ~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~ 517 (642)
T COG1020 438 APALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLN 517 (642)
T ss_pred cCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEee
Confidence 864 789999999999999999999999999988732222 22234899999999999999999988754 467999
Q ss_pred cccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCCCCCC
Q 039504 175 GYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMK 240 (240)
Q Consensus 175 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 240 (240)
.||.||+........... .. .. ...+|+|.++..+.|+| +..+++|.|..||+++.|.++++
T Consensus 518 ~ygpTe~~~~~~~~~~~~-~~-~~-~~piG~p~~n~~~~ild-~~~~~~p~gv~gel~i~g~~~a~ 579 (642)
T COG1020 518 LYGPTEATLDAPSFPISA-EL-ES-RVPIGRPVANTQLYILD-QGLRPLPLGVPGELYIAGLGLAL 579 (642)
T ss_pred ccCccHHhhheeeEEccc-cc-CC-CCCcceeeCCCeEEEEC-CCCCcCCCCCCeeeEECCcchhh
Confidence 999999654333321111 11 11 56899999999999999 88999999999999999988764
No 125
>PTZ00297 pantothenate kinase; Provisional
Probab=99.88 E-value=1.2e-21 Score=176.37 Aligned_cols=209 Identities=10% Similarity=0.039 Sum_probs=142.0
Q ss_pred cchhhHhhcCCC--CCCCCCCCCCCcEEEec---CCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecc
Q 039504 3 LHFTVLSEADED--QIPEVAIEPDDPVALPF---SSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLP 77 (240)
Q Consensus 3 ~~~~~l~~~~~~--~~~~~~~~~~~~~~i~~---TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p 77 (240)
++|+++++.... .......+++|++.++| ||||||.||||.+||+++...+........ .....++|++++++|
T Consensus 575 ~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~-~~~~~~~D~~Ls~LP 653 (1452)
T PTZ00297 575 IPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGV-LPSSFKKHLMVHFTP 653 (1452)
T ss_pred eeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhcc-ccCCCCCCEEEEech
Confidence 468888876532 11223457889998885 999999999999999999998876543110 113467899999999
Q ss_pred hHHhhhhHHHHHHHhhcCceEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCc---------------
Q 039504 78 LFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDL--------------- 142 (240)
Q Consensus 78 ~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~--------------- 142 (240)
++|+++.. ..+.++..|+++.+ ++++.+++.+++++||++.++|.+++.+.+.........
T Consensus 654 LaHI~er~-~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k 729 (1452)
T PTZ00297 654 FAMLFNRV-FVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLR 729 (1452)
T ss_pred HHHHHHHH-HHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 99999965 56778899988864 478999999999999999999999997765322110000
Q ss_pred ---------------------------cchhhhhccCC--CCCHHHHHHHHHhCCCCcccccccccccccchhhccCCCC
Q 039504 143 ---------------------------SSIRVVLSGAA--PLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAK 193 (240)
Q Consensus 143 ---------------------------~~lr~v~~~G~--~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~ 193 (240)
.++|.+++||. +++..+.. ..++...||+||+.. ...
T Consensus 730 ~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~-------~i~i~~g~glTE~~~--~~~----- 795 (1452)
T PTZ00297 730 SRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE-------HISVCYVPCLREVFF--LPS----- 795 (1452)
T ss_pred HHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC-------CceEEEecceEEeee--ecC-----
Confidence 13555555542 33322211 345666789999531 111
Q ss_pred CCCCCCCCccccccCCceEEEeeC-CCCCCCCCCCCceEEEeCC
Q 039504 194 QPFPTKSGSCGTVVRNAELKVIDP-ETGASLPHNQPGEICIRGP 236 (240)
Q Consensus 194 ~~~~~~~~~~G~~~~~~~v~i~d~-~~~~~~~~g~~Gel~v~~~ 236 (240)
.... ...|.|+|+++++|.|. |.+. .+..|||++++.
T Consensus 796 -~~~~--~~~G~PlpgvEvKI~~~~E~~~---~~~~GEIlvr~~ 833 (1452)
T PTZ00297 796 -EGVF--CVDGTPAPSLQVDLEPFDEPSD---GAGIGQLVLAKK 833 (1452)
T ss_pred -CCCc--ccCCeecCceEEEEcccccccC---CCCCCeEEEEEC
Confidence 1111 12399999999999873 3222 124699999864
No 126
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.68 E-value=8.6e-16 Score=124.27 Aligned_cols=153 Identities=19% Similarity=0.149 Sum_probs=107.4
Q ss_pred cEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCce-EEEcc-C
Q 039504 26 PVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAG-VLLMQ-K 103 (240)
Q Consensus 26 ~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~-~v~~~-~ 103 (240)
-..+..||||||.|-.+.++................ ..++..++++.... +..+ .++..+.+... +-..+ .
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~-~~g~~~g~r~a~~~---~~~~---~ly~~~~~~~~~~~~~~l~ 173 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVL-PDGLFAKHRIAFFL---RADN---NLYQSVNNRWISLDFFDLL 173 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhC-ccccccCCcEEEEE---ccCh---hHHHHHHhccceeeecCCC
Confidence 456778999999999999999876544333222222 23556666555442 1111 12222222211 12221 2
Q ss_pred CCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCccccccccccccc
Q 039504 104 FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGP 183 (240)
Q Consensus 104 ~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~ 183 (240)
.+.+.+++.|++++|+++.++|+.+..|++..+..+.. ..+|.++++||.+++++++.+++.| ++++++.||+|| +.
T Consensus 174 ~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g~ 250 (430)
T TIGR02304 174 APFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-GF 250 (430)
T ss_pred cCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-hh
Confidence 56789999999999999999999999999976655443 4789999999999999999999999 899999999999 55
Q ss_pred chhhc
Q 039504 184 VLSMC 188 (240)
Q Consensus 184 ~~~~~ 188 (240)
+...|
T Consensus 251 la~eC 255 (430)
T TIGR02304 251 LASTC 255 (430)
T ss_pred eEEec
Confidence 54444
No 127
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.51 E-value=9.5e-13 Score=104.43 Aligned_cols=205 Identities=18% Similarity=0.139 Sum_probs=124.2
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCc-EEEEecchHHh---hhh-HHHHHHHhhc
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGD-VVLCVLPLFHI---YSL-NSVLLCSLRA 94 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d-~~l~~~p~~~~---~g~-~~~~~~~l~~ 94 (240)
+..++++..++.||||||.|-.+.+++..+......+...+..+.+..... .++...|.... .+. ....+..+..
T Consensus 85 S~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~ 164 (365)
T PF04443_consen 85 SVPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFF 164 (365)
T ss_pred ecChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhccc
Confidence 444567788899999999998788887766655543333222122222222 23333342211 111 1112223344
Q ss_pred CceEEEc-cCCCHHHHHHHHH----hccceeeeechHHHHHHHhCCCCCCCCc--c-chhhhhccC------CCCC-HHH
Q 039504 95 GAGVLLM-QKFEIGALLELIQ----RHRVSVAAVVPPLVLALAKNPMVADYDL--S-SIRVVLSGA------APLG-KEL 159 (240)
Q Consensus 95 G~~~v~~-~~~~~~~~~~~i~----~~~~t~l~~~p~~~~~l~~~~~~~~~~~--~-~lr~v~~~G------~~~~-~~~ 159 (240)
+....+- ..+|.+.+.+.+. +.++..+++.|.++..+....++.+..+ + ..+++..|| +.++ +++
T Consensus 165 ~~~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef 244 (365)
T PF04443_consen 165 GSRFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEF 244 (365)
T ss_pred CceeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHH
Confidence 5553332 2367777766664 4567888998887776665555444333 2 344555555 4575 688
Q ss_pred HHHHHHhCCC---CcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCCCCCCceEEEeCC
Q 039504 160 EDALRSRVPQ---AILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGP 236 (240)
Q Consensus 160 ~~~~~~~~~~---~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~ 236 (240)
.+.+++.|+- .++++.||+||..+....+. ... -...|+ |.|.||++.++++.|++|-|.|-.+
T Consensus 245 ~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~-------~~~----~~~p~w--V~iRDp~tl~~~~~Ge~Gli~vidl 311 (365)
T PF04443_consen 245 YARLQEVFGVIPIENIYDMYGMTELNSQAYECG-------HGH----FHVPPW--VIIRDPETLEPLPPGETGLIQVIDL 311 (365)
T ss_pred HHHHHHHHCCCCHHHeeeeeeccccchhheeCC-------CCc----ccCCCe--EEEECCCCCcCCCCCCeeEEEEEcc
Confidence 8899998832 47999999999876554431 101 123455 7788999999999999999998766
Q ss_pred C
Q 039504 237 Q 237 (240)
Q Consensus 237 ~ 237 (240)
.
T Consensus 312 ~ 312 (365)
T PF04443_consen 312 A 312 (365)
T ss_pred c
Confidence 4
No 128
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.44 E-value=8.6e-13 Score=98.84 Aligned_cols=98 Identities=22% Similarity=0.284 Sum_probs=76.5
Q ss_pred chhhHhhcCCCCCCCC-CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhh
Q 039504 4 HFTVLSEADEDQIPEV-AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIY 82 (240)
Q Consensus 4 ~~~~l~~~~~~~~~~~-~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~ 82 (240)
+|.+..+.......+. ...++|++.++||||+ +|.++.... . ..++.++|+++ .+|++|.+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~----~~~l~~~D~~l-~~Pl~H~~ 190 (227)
T TIGR03089 129 DFAPEVRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----R----AAGLPPGDRVL-VLAWTDLE 190 (227)
T ss_pred chhhhhhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----h----hcCCCCCCeEE-ecCCCchH
Confidence 4444444333332223 4567999999999986 455554443 1 44678999999 99999999
Q ss_pred hhHHHHHHHhhcCceEEEccCCCHHHHHHHHHhccce
Q 039504 83 SLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVS 119 (240)
Q Consensus 83 g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t 119 (240)
|+...++.++..|+++++.++|++..+++.|+++|+|
T Consensus 191 gl~~~~~~~l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 191 DFLATLLAPLAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred HHHHHHHHHhccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 9987899999999999999999999999999999986
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.27 E-value=2.7e-10 Score=98.19 Aligned_cols=216 Identities=15% Similarity=0.140 Sum_probs=155.2
Q ss_pred CCCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceE
Q 039504 19 VAIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 19 ~~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 98 (240)
....+..++++-+.--++|+--++.++|..+++.+..... .+.+.+..-++.+.+++...|+.+..+..+++|...
T Consensus 938 g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe----~~~l~~~rpl~~~~~~~sGlgf~~wcLlgVysGh~T 1013 (1363)
T KOG3628|consen 938 GLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKE----TCQLYKSRPLLGCSSPYSGLGFNHWCLLGVYSGHPT 1013 (1363)
T ss_pred cccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHH----HHccccCCceEEEecCccchhHHHHHHHHHHcCCce
Confidence 3455677999999999999999999999999999988776 667788888888888888888888889999999987
Q ss_pred EEccC----CCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhh------hccCCCCCHHHHHHHHHhCC
Q 039504 99 LLMQK----FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVV------LSGAAPLGKELEDALRSRVP 168 (240)
Q Consensus 99 v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v------~~~G~~~~~~~~~~~~~~~~ 168 (240)
.+.++ .++..+++.++++++.-++.+-+.++.+.+..+.+..+++....- +..-|.....+.+.+.+.|-
T Consensus 1014 ~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~ali~sf~klfa 1093 (1363)
T KOG3628|consen 1014 LLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRIALIASFKKLFA 1093 (1363)
T ss_pred eecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHHHHHHHHHHHHH
Confidence 77764 678999999999999999999999999988777666555433222 22234444556666666551
Q ss_pred -----CCcccccccccccccchhhccCCCCCC-----------------------CCCCCCccccccCCceEEEeeCCCC
Q 039504 169 -----QAILGQGYGMTEAGPVLSMCLGFAKQP-----------------------FPTKSGSCGTVVRNAELKVIDPETG 220 (240)
Q Consensus 169 -----~~~i~~~yG~tE~~~~~~~~~~~~~~~-----------------------~~~~~~~~G~~~~~~~v~i~d~~~~ 220 (240)
...+--.|++.=--.++... ....++ .....-..|+..+++++.|++||+.
T Consensus 1094 ~igLsp~avStsys~r~Np~Ic~r~-~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~IvnPEtk 1172 (1363)
T KOG3628|consen 1094 AIGLSPRAVSTSYSSRVNPFICLRS-YSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVNPETK 1172 (1363)
T ss_pred HcCCChhhhcccccccCChHhhhcc-ccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEeCCccc
Confidence 12233345444322222221 000000 0000113388889999999999999
Q ss_pred CCCCCCCCceEEEeCCCCC
Q 039504 221 ASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 221 ~~~~~g~~Gel~v~~~~~~ 239 (240)
.+|.+|+.||||+.|++-+
T Consensus 1173 ~pc~dge~GEIW~~S~hnA 1191 (1363)
T KOG3628|consen 1173 GPCRDGELGEIWVNSAHNA 1191 (1363)
T ss_pred cccccCCcceEEecccccc
Confidence 9999999999999998654
No 130
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.82 E-value=4.6e-08 Score=86.11 Aligned_cols=164 Identities=22% Similarity=0.254 Sum_probs=114.4
Q ss_pred CCCCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecch-HHhhhhHHHHHHHhhcCceE
Q 039504 20 AIEPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPL-FHIYSLNSVLLCSLRAGAGV 98 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~-~~~~g~~~~~~~~l~~G~~~ 98 (240)
...++..+.+.||||+||.||++.-+|..+.+...+.... +.....+.+ .+.+. ..+........+.+..|..+
T Consensus 192 ~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~----f~~t~s~~~-~~~~~~~~~d~i~~~~~~~L~~~~~l 266 (1032)
T KOG1178|consen 192 VGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTT----FPPTGSDRF-TFKTSVYFDDTIQKFIGALLFNGNNL 266 (1032)
T ss_pred eecccccceEeecccccccccccchhHHHHHhhhhhcccc----CCcCccchh-hhhheeecccchHHHHhhHhhcCcee
Confidence 3456678899999999999999999999998888776653 334555554 32221 12222222345666667766
Q ss_pred EEccCC---CHHHHHHHHHhccceeeeechHHHHHHHhCCCCC-------------CCCccchhhhhccCCCCCHHHHHH
Q 039504 99 LLMQKF---EIGALLELIQRHRVSVAAVVPPLVLALAKNPMVA-------------DYDLSSIRVVLSGAAPLGKELEDA 162 (240)
Q Consensus 99 v~~~~~---~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~-------------~~~~~~lr~v~~~G~~~~~~~~~~ 162 (240)
+.+... .+.++.+.+.+++++..+.+|++.+.++...... ....+.+|...++||+....+...
T Consensus 267 ~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s 346 (1032)
T KOG1178|consen 267 LVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTS 346 (1032)
T ss_pred ecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccchhhhhh
Confidence 666443 3689999999999999999999988887754431 112246899999999999999887
Q ss_pred HHHhCCCCcccccccccccccchhhc
Q 039504 163 LRSRVPQAILGQGYGMTEAGPVLSMC 188 (240)
Q Consensus 163 ~~~~~~~~~i~~~yG~tE~~~~~~~~ 188 (240)
+.+.+...-...-|+.++......+.
T Consensus 347 ~~~~~~~~~~~~~y~s~~~~~~~s~~ 372 (1032)
T KOG1178|consen 347 TFDLLAEIFFGLPYLSTDPTGLVSYD 372 (1032)
T ss_pred hhhcccceeeeecccCCCCccceeHH
Confidence 77765332233448888887666553
No 131
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=98.33 E-value=3.4e-06 Score=73.83 Aligned_cols=212 Identities=18% Similarity=0.134 Sum_probs=137.4
Q ss_pred cEEEecCCCCCCCCceeeeehHHHHHHHHhhhc-----------CC-----CCCccccCCcEEEEecchHHhhhhHHHHH
Q 039504 26 PVALPFSSGTTGLPKGVVLTHKSLITSVAQQVD-----------GE-----NPNLYLTNGDVVLCVLPLFHIYSLNSVLL 89 (240)
Q Consensus 26 ~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~-----------~~-----~~~~~~~~~d~~l~~~p~~~~~g~~~~~~ 89 (240)
..+|.||.+++|.--+++++|. +..+.+-+.. ++ ...+.....+.++.......-.|+.+.++
T Consensus 252 ~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~lGlilGV~ 330 (1363)
T KOG3628|consen 252 YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQLGLILGVL 330 (1363)
T ss_pred eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeeccCcccccchhhhhh
Confidence 7899999999999999999998 5444332211 11 11334456677777777777788888899
Q ss_pred HHhhcCceEEEccC---CCHHHHHHHHHhccceeeeechHHHHHHHhCCC-----------CCCCCccchhhhhccCCCC
Q 039504 90 CSLRAGAGVLLMQK---FEIGALLELIQRHRVSVAAVVPPLVLALAKNPM-----------VADYDLSSIRVVLSGAAPL 155 (240)
Q Consensus 90 ~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~-----------~~~~~~~~lr~v~~~G~~~ 155 (240)
.++++|.+.+.++. ..|-.+.+++.+++++++..--..+.+....-. ..-.+++++|.+++.=+.+
T Consensus 331 ~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~sslk~C~Vtc~~v 410 (1363)
T KOG3628|consen 331 VALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSSLKGCMVTCTAV 410 (1363)
T ss_pred hhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCccceeeeEEeeeec
Confidence 99999999888876 677889999999999998775444433322111 1114567899888888888
Q ss_pred CHHHHHHHHHhCCC---------------------CcccccccccccccchhhccCCCCCCCC-----------------
Q 039504 156 GKELEDALRSRVPQ---------------------AILGQGYGMTEAGPVLSMCLGFAKQPFP----------------- 197 (240)
Q Consensus 156 ~~~~~~~~~~~~~~---------------------~~i~~~yG~tE~~~~~~~~~~~~~~~~~----------------- 197 (240)
+.+..+...+.|-. .-.+..=++.|.+......+. ......
T Consensus 411 d~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~-~~~~~~~~e~ll~~~~L~~~~V~ 489 (1363)
T KOG3628|consen 411 DTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPE-QMADTLPGEGLLSKEALKLNEVE 489 (1363)
T ss_pred chHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcc-cccccCccceeeeccccccceEE
Confidence 88877766665511 111112222444433332221 000000
Q ss_pred ---------CCCCccccccCC-ceEEEeeCCCCCCCCCCCCceEEEeCCCCC
Q 039504 198 ---------TKSGSCGTVVRN-AELKVIDPETGASLPHNQPGEICIRGPQIM 239 (240)
Q Consensus 198 ---------~~~~~~G~~~~~-~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~ 239 (240)
.....+|...|+ ..+.|+++++.+.|.++++|||||.++++.
T Consensus 490 v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~ 541 (1363)
T KOG3628|consen 490 VDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLG 541 (1363)
T ss_pred EcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCcc
Confidence 001133555554 557899999999999999999999998864
No 132
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.33 E-value=0.021 Score=48.88 Aligned_cols=42 Identities=10% Similarity=-0.162 Sum_probs=29.3
Q ss_pred cchhhhhccCCCCCHHHHHHHHHhCCCCcccc-cccccccccc
Q 039504 143 SSIRVVLSGAAPLGKELEDALRSRVPQAILGQ-GYGMTEAGPV 184 (240)
Q Consensus 143 ~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~-~yG~tE~~~~ 184 (240)
+.+|.|-+.-..-...-...++..+++.++.. .|++||+..-
T Consensus 293 P~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~g 335 (606)
T PLN02247 293 PRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFG 335 (606)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEE
Confidence 56777666444455666677877777877665 6999997643
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=96.99 E-value=0.0012 Score=55.84 Aligned_cols=32 Identities=31% Similarity=0.458 Sum_probs=25.8
Q ss_pred CCCCCCcEEEecCCCCCCC-CceeeeehHHHHH
Q 039504 20 AIEPDDPVALPFSSGTTGL-PKGVVLTHKSLIT 51 (240)
Q Consensus 20 ~~~~~~~~~i~~TSGtTG~-pk~v~~s~~~l~~ 51 (240)
.+.++.+.+...||||||. +|.+++|...+..
T Consensus 76 vL~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~ 108 (528)
T PF03321_consen 76 VLTPGPPIYFALTSGTTGGKSKLIPYTKEFLKE 108 (528)
T ss_dssp CTSSS--SEEEEEEEEETTEEEEEEESHHHHHH
T ss_pred CCCCCCCCeEEeCCCCCCCCCceeeccHHHHHH
Confidence 4556678888899999999 9999999998765
No 134
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=96.62 E-value=0.076 Score=45.54 Aligned_cols=31 Identities=23% Similarity=0.105 Sum_probs=25.2
Q ss_pred CCCCCcEEEecCCCCCC-CCceeeeehHHHHH
Q 039504 21 IEPDDPVALPFSSGTTG-LPKGVVLTHKSLIT 51 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtTG-~pk~v~~s~~~l~~ 51 (240)
..+..+.+...|||||| .+|.+++++..+..
T Consensus 98 L~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 129 (612)
T PLN02620 98 LCSKPISEFLTSSGTSGGERKLMPTIEEELGR 129 (612)
T ss_pred cCCCChhhhhhcCCCCCCceeeeecCHHHHHH
Confidence 44566667888999997 69999999998765
No 135
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=92.71 E-value=0.67 Score=38.02 Aligned_cols=90 Identities=24% Similarity=0.287 Sum_probs=67.8
Q ss_pred CCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc
Q 039504 23 PDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ 102 (240)
Q Consensus 23 ~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 102 (240)
|+.++++. -....+|..++...+..+...+. ..++.++|++..+.+... .+....++++..|...+..+
T Consensus 9 pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~-~~g~~~~~~V~i~~~n~~--~~~~~~~A~~~~G~~~v~l~ 77 (417)
T PF00501_consen 9 PDRIALID--------DEGRSLTYKQLYERVRKLAAALR-KLGVKKGDRVAILLPNSI--EFVVAFLACLRAGAIPVPLD 77 (417)
T ss_dssp TTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHH-HTTSSTTSEEEEEESSSH--HHHHHHHHHHHTT-EEEEEE
T ss_pred CCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHH-HhCCCccccccccCCccc--eeeeeecccccccccccccc
Confidence 56666665 22356888888888877766555 568899999888887643 33346789999999988885
Q ss_pred -CCCHHHHHHHHHhccceeeee
Q 039504 103 -KFEIGALLELIQRHRVSVAAV 123 (240)
Q Consensus 103 -~~~~~~~~~~i~~~~~t~l~~ 123 (240)
....+.+...+++.+++++++
T Consensus 78 ~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 78 PSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TTSSHHHHHHHHHHHTESEEEE
T ss_pred cccccccccccccccceeEEEE
Confidence 478899999999999999996
No 136
>PLN03052 acetate--CoA ligase; Provisional
Probab=91.57 E-value=2.1 Score=38.39 Aligned_cols=101 Identities=16% Similarity=0.183 Sum_probs=72.0
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.|+.++.+....+..+.+ ...+|...|...+..+...+. ..++.++|++..++|..-..- ..+++++..|+..+..
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~GdrVai~~pn~~e~v--ia~LA~~~~Gav~vpi 263 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALD-ALGFEKGDAIAIDMPMNVHAV--IIYLAIILAGCVVVSI 263 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCCHHHH--HHHHHHHHcCCEEEee
Confidence 355666554333221222 245788898888877666554 468999999999998644322 3578888899888877
Q ss_pred c-CCCHHHHHHHHHhccceeeeechH
Q 039504 102 Q-KFEIGALLELIQRHRVSVAAVVPP 126 (240)
Q Consensus 102 ~-~~~~~~~~~~i~~~~~t~l~~~p~ 126 (240)
. .+.++++...+++.+++++++...
T Consensus 264 ~p~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 264 ADSFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCCCHHHHHHHHHhcCceEEEEcCc
Confidence 4 588999999999999999887654
No 137
>PLN02654 acetate-CoA ligase
Probab=91.21 E-value=2.2 Score=37.77 Aligned_cols=82 Identities=23% Similarity=0.274 Sum_probs=64.9
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
..+|...|...+..+...+. ..+++++|++..++|..-. +...+++++..|+..+... .+..+.+...+++.++.+
T Consensus 119 ~~~Ty~eL~~~v~~lA~~L~-~~Gv~~GdrV~i~~pn~~e--~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~ 195 (666)
T PLN02654 119 ASLTYSELLDRVCQLANYLK-DVGVKKGDAVVIYLPMLME--LPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKV 195 (666)
T ss_pred EEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceE
Confidence 46889999888877666554 5689999999999986543 3335788999998888764 588999999999999999
Q ss_pred eeechH
Q 039504 121 AAVVPP 126 (240)
Q Consensus 121 l~~~p~ 126 (240)
+++...
T Consensus 196 li~~~~ 201 (666)
T PLN02654 196 VITCNA 201 (666)
T ss_pred EEEcCc
Confidence 887654
No 138
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=91.09 E-value=2.2 Score=37.64 Aligned_cols=81 Identities=19% Similarity=0.169 Sum_probs=64.8
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc-cCCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM-QKFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~ 120 (240)
..+|...+...+..+...+. ..++.++|++..++|..-..- ..+++++..|+..+.. +.+.++.+...+++.++++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~-~~Gv~~GDrV~i~~~n~~e~~--~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ 167 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLL-NLNISKNDNVLIYMANTLEPL--IAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKL 167 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHH--HHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCE
Confidence 56899999888877766554 468999999999998654433 3578888999888776 4689999999999999999
Q ss_pred eeech
Q 039504 121 AAVVP 125 (240)
Q Consensus 121 l~~~p 125 (240)
+++..
T Consensus 168 li~~~ 172 (647)
T PTZ00237 168 IITTN 172 (647)
T ss_pred EEEcc
Confidence 88754
No 139
>PLN02736 long-chain acyl-CoA synthetase
Probab=91.06 E-value=3.1 Score=36.66 Aligned_cols=89 Identities=12% Similarity=-0.068 Sum_probs=68.4
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
..+|..++...+..+...+. ..++.++|++..+++.... +....++++..|+..+... ...++++..++++.++++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~-~~Gv~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ 153 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLV-QHGIPKGACVGLYFINRPE--WLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAA 153 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCE
Confidence 34788888887776665544 4688999999988875543 3335788899998888764 588999999999999999
Q ss_pred eeechHHHHHHHh
Q 039504 121 AAVVPPLVLALAK 133 (240)
Q Consensus 121 l~~~p~~~~~l~~ 133 (240)
+++.+..+..+..
T Consensus 154 l~~~~~~~~~~~~ 166 (651)
T PLN02736 154 IFCVPQTLNTLLS 166 (651)
T ss_pred EEECHHHHHHHHH
Confidence 9998877665543
No 140
>PRK06839 acyl-CoA synthetase; Validated
Probab=90.96 E-value=3.1 Score=35.01 Aligned_cols=88 Identities=11% Similarity=0.019 Sum_probs=67.5
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
..+|..++...+..+...+...+++.+++++...++-... +...+++++..|+..+..+ ...++++...+++.+++.
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE--YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTV 103 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceE
Confidence 4688899988887776655333578899999888875543 3346789999999888876 478888999999999999
Q ss_pred eeechHHHHHH
Q 039504 121 AAVVPPLVLAL 131 (240)
Q Consensus 121 l~~~p~~~~~l 131 (240)
++..+.....+
T Consensus 104 i~~~~~~~~~~ 114 (496)
T PRK06839 104 LFVEKTFQNMA 114 (496)
T ss_pred EEEcHHHHHHH
Confidence 98887765543
No 141
>PRK09274 peptide synthase; Provisional
Probab=90.84 E-value=2 Score=36.81 Aligned_cols=100 Identities=15% Similarity=0.107 Sum_probs=69.1
Q ss_pred CCCcEEEecCCCCC-CCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 23 PDDPVALPFSSGTT-GLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 23 ~~~~~~i~~TSGtT-G~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
|+.++.+....++. ...+...+|..++...+..+...+. ..++.++|++..+++.... +...+++++..|+..+..
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~-~~g~~~gd~V~~~~~n~~~--~~~~~la~~~~G~~~v~l 96 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLN-AAGIGRGMRAVLMVTPSLE--FFALTFALFKAGAVPVLV 96 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCcHH--HHHHHHHHHHcCeEEEEc
Confidence 45555554332221 1223335788888887776665544 4578999999988875543 333578999999998887
Q ss_pred cC-CCHHHHHHHHHhccceeeeech
Q 039504 102 QK-FEIGALLELIQRHRVSVAAVVP 125 (240)
Q Consensus 102 ~~-~~~~~~~~~i~~~~~t~l~~~p 125 (240)
.+ ...+++...+++.++..++..+
T Consensus 97 ~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 97 DPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCCccHHHHHHHHHhcCCCEEEecc
Confidence 54 6778888999999999887754
No 142
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=90.59 E-value=2.5 Score=36.95 Aligned_cols=99 Identities=19% Similarity=0.195 Sum_probs=71.4
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.|+.++.+.... .+| ....+|..++...+..+...+. ..++.++|++..++|....+ ...+++++..|+..+..
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~i 143 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLK-SLGVKKGDRVAIYMPMIPEA--AIAMLACARIGAIHSVV 143 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEecc
Confidence 456666654322 122 2346889998888777666554 46889999999998865433 33578899999888876
Q ss_pred c-CCCHHHHHHHHHhccceeeeechH
Q 039504 102 Q-KFEIGALLELIQRHRVSVAAVVPP 126 (240)
Q Consensus 102 ~-~~~~~~~~~~i~~~~~t~l~~~p~ 126 (240)
. .+.++.+...+++.+++++++...
T Consensus 144 ~~~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 144 FGGFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 4 588899999999999998887653
No 143
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=90.58 E-value=0.16 Score=43.86 Aligned_cols=30 Identities=20% Similarity=0.154 Sum_probs=25.0
Q ss_pred CCCCCcEEEecCCCCC-CCCceeeeehHHHH
Q 039504 21 IEPDDPVALPFSSGTT-GLPKGVVLTHKSLI 50 (240)
Q Consensus 21 ~~~~~~~~i~~TSGtT-G~pk~v~~s~~~l~ 50 (240)
..++.+.+...||||| |.+|.+++|.+.+.
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 4566677888899999 89999999997765
No 144
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=89.44 E-value=3.7 Score=36.07 Aligned_cols=98 Identities=17% Similarity=0.153 Sum_probs=70.7
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.|+.++.+..... ......+|..++...+..+...+. ..++.++|++..+++....+ ...+++++..|+..+..
T Consensus 80 ~p~~~Al~~~~~~---~~~~~~lTy~eL~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~l 153 (637)
T PRK00174 80 RGDKVAIIWEGDD---PGDSRKITYRELHREVCRFANALK-SLGVKKGDRVAIYMPMIPEA--AVAMLACARIGAVHSVV 153 (637)
T ss_pred CCCCeEEEEECCC---CCceEEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEec
Confidence 3566666542211 012456899999888877766554 46889999999888755433 23578899999888877
Q ss_pred c-CCCHHHHHHHHHhccceeeeech
Q 039504 102 Q-KFEIGALLELIQRHRVSVAAVVP 125 (240)
Q Consensus 102 ~-~~~~~~~~~~i~~~~~t~l~~~p 125 (240)
. .+.++++...+++.++.++++..
T Consensus 154 ~~~~~~~~l~~~l~~~~~~~li~~~ 178 (637)
T PRK00174 154 FGGFSAEALADRIIDAGAKLVITAD 178 (637)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEcC
Confidence 5 58889999999999999888754
No 145
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=89.35 E-value=4.5 Score=29.71 Aligned_cols=91 Identities=19% Similarity=0.201 Sum_probs=56.6
Q ss_pred CcEEEEecch-HHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeechH------HHHHHHhCCCCCCC
Q 039504 69 GDVVLCVLPL-FHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVPP------LVLALAKNPMVADY 140 (240)
Q Consensus 69 ~d~~l~~~p~-~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~------~~~~l~~~~~~~~~ 140 (240)
+.+++.+.+- .|..|..+.....-..|..++... ...++++.+.+++.++.++..+-+ .++.+.+..+....
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~ 164 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGY 164 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCC
Confidence 3444444442 777788755555667788888765 578899999999999998776542 22333333222211
Q ss_pred CccchhhhhccCCCCCHHHHH
Q 039504 141 DLSSIRVVLSGAAPLGKELED 161 (240)
Q Consensus 141 ~~~~lr~v~~~G~~~~~~~~~ 161 (240)
.+++ .+++||.++.++..+
T Consensus 165 -~~~v-~i~vGG~~~~~~~~~ 183 (197)
T TIGR02370 165 -RDSV-KFMVGGAPVTQDWAD 183 (197)
T ss_pred -CCCC-EEEEEChhcCHHHHH
Confidence 1122 377899888765444
No 146
>PRK07788 acyl-CoA synthetase; Validated
Probab=89.16 E-value=2.5 Score=36.28 Aligned_cols=86 Identities=21% Similarity=0.174 Sum_probs=66.1
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++...++..- .+...+++++..|+..+..+. ...+++...+++.+++.+
T Consensus 74 ~~Ty~el~~~~~~la~~L~-~~gi~~gd~V~i~~~n~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 150 (549)
T PRK07788 74 TLTYAELDEQSNALARGLL-ALGVRAGDGVAVLARNHR--GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKAL 150 (549)
T ss_pred ceeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEE
Confidence 5788888877766655443 457889999998876543 333467899999999988764 788999999999999999
Q ss_pred eechHHHHHH
Q 039504 122 AVVPPLVLAL 131 (240)
Q Consensus 122 ~~~p~~~~~l 131 (240)
+..+.+...+
T Consensus 151 i~~~~~~~~~ 160 (549)
T PRK07788 151 VYDDEFTDLL 160 (549)
T ss_pred EECchhHHHH
Confidence 9887766554
No 147
>PRK07529 AMP-binding domain protein; Validated
Probab=89.16 E-value=2.9 Score=36.66 Aligned_cols=98 Identities=20% Similarity=0.210 Sum_probs=68.1
Q ss_pred CCCCcEEEecCCC-CCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEE
Q 039504 22 EPDDPVALPFSSG-TTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLL 100 (240)
Q Consensus 22 ~~~~~~~i~~TSG-tTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 100 (240)
.|+.++.+....+ ... +...+|...+...+..+...+. ..++.++|++..++|....+ ...+++++..|..+.+
T Consensus 38 ~p~~~Al~~~~~~~~~~--~~~~~Ty~eL~~~v~~~A~~L~-~~Gi~~gd~V~i~~~n~~e~--~~~~lA~~~~Gi~~pi 112 (632)
T PRK07529 38 HPDAPALSFLLDADPLD--RPETWTYAELLADVTRTANLLH-SLGVGPGDVVAFLLPNLPET--HFALWGGEAAGIANPI 112 (632)
T ss_pred CCCCceEEeecccCCCC--CCceeEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCEEEeC
Confidence 4566776655332 222 3456888888887776665444 45889999999999865443 2356777788854333
Q ss_pred ccCCCHHHHHHHHHhccceeeeec
Q 039504 101 MQKFEIGALLELIQRHRVSVAAVV 124 (240)
Q Consensus 101 ~~~~~~~~~~~~i~~~~~t~l~~~ 124 (240)
.+...++++..++++.++.+++..
T Consensus 113 ~~~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 113 NPLLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred CCcCCHHHHHHHHHhcCCcEEEEe
Confidence 356888999999999999988875
No 148
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=89.13 E-value=3.8 Score=36.18 Aligned_cols=81 Identities=21% Similarity=0.145 Sum_probs=63.9
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
..+|...+...+..+...+. ..++.++|++..++|..-..- ..+++++..|+..+... .+..+.+...+++.++.+
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~-~~Gv~~GdrV~i~~~n~~e~~--~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~ 189 (652)
T TIGR01217 113 APVTWAELRRQVASLAAALR-ALGVRPGDRVSGYLPNIPQAV--VAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKL 189 (652)
T ss_pred eEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHH--HHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcE
Confidence 45889999888877776554 458999999999998654433 35778888898887765 588899999999999998
Q ss_pred eeech
Q 039504 121 AAVVP 125 (240)
Q Consensus 121 l~~~p 125 (240)
+++..
T Consensus 190 li~~~ 194 (652)
T TIGR01217 190 LFTVD 194 (652)
T ss_pred EEEcc
Confidence 88754
No 149
>PRK08316 acyl-CoA synthetase; Validated
Probab=88.97 E-value=3.9 Score=34.62 Aligned_cols=88 Identities=19% Similarity=0.105 Sum_probs=66.1
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
..+|..++...+..+...+. ..++.++|++..+.+.... +...+++++..|...+... ....+++..++++.++..
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~-~~gi~~~~~V~l~~~~~~~--~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 111 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALL-DLGLKKGDRVAALGHNSDA--YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARA 111 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCE
Confidence 45788888777766655444 3478899999988876554 2335789999998888876 477889999999999999
Q ss_pred eeechHHHHHHH
Q 039504 121 AAVVPPLVLALA 132 (240)
Q Consensus 121 l~~~p~~~~~l~ 132 (240)
++........+.
T Consensus 112 ii~~~~~~~~~~ 123 (523)
T PRK08316 112 FLVDPALAPTAE 123 (523)
T ss_pred EEEccchHHHHH
Confidence 988776655443
No 150
>PLN02574 4-coumarate--CoA ligase-like
Probab=88.93 E-value=4.1 Score=35.10 Aligned_cols=87 Identities=24% Similarity=0.256 Sum_probs=64.8
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++......+...+....++.++|++..+.+... .+...+++++..|+..+...+ ...+++...+++.++..+
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~--~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~ 143 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSV--YFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLA 143 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcc--hHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEE
Confidence 36778887777666665542267899999998887553 333357889999988887754 778899999999999988
Q ss_pred eechHHHHHH
Q 039504 122 AVVPPLVLAL 131 (240)
Q Consensus 122 ~~~p~~~~~l 131 (240)
+..+.....+
T Consensus 144 ~~~~~~~~~~ 153 (560)
T PLN02574 144 FTSPENVEKL 153 (560)
T ss_pred EECHHHHHHH
Confidence 8877665544
No 151
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=88.87 E-value=4.3 Score=35.76 Aligned_cols=98 Identities=20% Similarity=0.162 Sum_probs=69.7
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.|+.++.+.... .| ....+|..++...+..+...+. ..++.++|++..++|..... ...+++++..|+..+..
T Consensus 97 ~~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~e~--v~~~lA~~~~Gav~v~l 169 (655)
T PRK03584 97 RDDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALR-ALGVGPGDRVAAYLPNIPET--VVAMLATASLGAIWSSC 169 (655)
T ss_pred CCCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCcEEEee
Confidence 355565554322 11 1346888888888777665554 45889999999998855432 33578899999888776
Q ss_pred c-CCCHHHHHHHHHhccceeeeechH
Q 039504 102 Q-KFEIGALLELIQRHRVSVAAVVPP 126 (240)
Q Consensus 102 ~-~~~~~~~~~~i~~~~~t~l~~~p~ 126 (240)
. .+..+.+...+++.++.++++...
T Consensus 170 ~~~~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 170 SPDFGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEccc
Confidence 5 578899999999999998887653
No 152
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=88.63 E-value=3 Score=35.71 Aligned_cols=87 Identities=20% Similarity=0.045 Sum_probs=66.9
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc-cCCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM-QKFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~ 120 (240)
-.+|...|...+..+...+....++ +||+++.++|..-... ..++++...|+..... +.+.++.+..-+.+-++.+
T Consensus 39 ~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~--~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~ 115 (528)
T COG0365 39 RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAV--IALLATARIGAIPAVVSPGLSAEAVADRIADLGPKV 115 (528)
T ss_pred eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHH--HHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCE
Confidence 5788888888887776655434567 9999999999765533 3578888888776665 5699999999999999999
Q ss_pred eeechHHHHHH
Q 039504 121 AAVVPPLVLAL 131 (240)
Q Consensus 121 l~~~p~~~~~l 131 (240)
+++....++..
T Consensus 116 vit~d~~~~~g 126 (528)
T COG0365 116 LIADDGTFRNG 126 (528)
T ss_pred EEEeccccccc
Confidence 99876666543
No 153
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=88.55 E-value=4.7 Score=34.09 Aligned_cols=85 Identities=16% Similarity=0.088 Sum_probs=64.4
Q ss_pred eehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeee
Q 039504 44 LTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAA 122 (240)
Q Consensus 44 ~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 122 (240)
+|..++...+..+...+. ..++++++++..+.|.... +...+++++..|+..+..+ ......+...+++.++..+.
T Consensus 32 ~Ty~~l~~~~~~~a~~L~-~~g~~~~~~V~l~~~~~~~--~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~ 108 (521)
T PRK06187 32 TTYAELDERVNRLANALR-ALGVKKGDRVAVFDWNSHE--YLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVL 108 (521)
T ss_pred EcHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEE
Confidence 788888777766655443 3578899999988886553 3335789999999888876 47788899999999999888
Q ss_pred echHHHHHH
Q 039504 123 VVPPLVLAL 131 (240)
Q Consensus 123 ~~p~~~~~l 131 (240)
........+
T Consensus 109 ~~~~~~~~~ 117 (521)
T PRK06187 109 VDSEFVPLL 117 (521)
T ss_pred EcchHHHHH
Confidence 877665544
No 154
>PLN03102 acyl-activating enzyme; Provisional
Probab=88.48 E-value=2.5 Score=36.58 Aligned_cols=83 Identities=13% Similarity=0.158 Sum_probs=64.6
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..++|..- .+...+++++..|+.++... ....+++...+++.+++.+
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~-~~Gl~~gd~Vai~~~n~~--e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~i 115 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLI-SLNITKNDVVSVLAPNTP--AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKIL 115 (579)
T ss_pred EEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEE
Confidence 5788888887777666544 457899999998888543 33345788999998888775 4788999999999999999
Q ss_pred eechHHH
Q 039504 122 AVVPPLV 128 (240)
Q Consensus 122 ~~~p~~~ 128 (240)
+..+...
T Consensus 116 i~~~~~~ 122 (579)
T PLN03102 116 FVDRSFE 122 (579)
T ss_pred EEChhhH
Confidence 8876544
No 155
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=87.84 E-value=2.6 Score=37.82 Aligned_cols=103 Identities=14% Similarity=0.148 Sum_probs=74.3
Q ss_pred eeeehHHHHHHHHhhhcCCCCC--ccccCC-----------cEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHH
Q 039504 42 VVLTHKSLITSVAQQVDGENPN--LYLTNG-----------DVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIG 107 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~--~~~~~~-----------d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~ 107 (240)
..+|...+...+..+..++... .|+.++ |++..+++... .+....++++..|+..+... .+.++
T Consensus 90 ~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~--ew~~~~lA~~~~Gav~Vpl~~~~~~~ 167 (746)
T PTZ00342 90 NYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI--NWLVADLACMLSGVTTLVMHSKFSID 167 (746)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH--HHHHHHHHHHHcCCeEEEecCCCCHH
Confidence 3578888888887776655422 478887 88888776543 34446788999998888874 58899
Q ss_pred HHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhc
Q 039504 108 ALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLS 150 (240)
Q Consensus 108 ~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~ 150 (240)
++..++++.++.++++....+..+..... .++.++.+++
T Consensus 168 el~~il~~s~~~~lv~~~~~~~~l~~~~~----~~~~l~~ii~ 206 (746)
T PTZ00342 168 VIVDILNETKLEWLCLDLDLVEGLLERKN----ELPHLKKLII 206 (746)
T ss_pred HHHHHHhcCCCCEEEEcHHHHHHHHHhhc----cCCCceEEEE
Confidence 99999999999999998777777655322 2344555444
No 156
>PLN02614 long-chain acyl-CoA synthetase
Probab=87.81 E-value=3.5 Score=36.49 Aligned_cols=88 Identities=13% Similarity=-0.031 Sum_probs=67.8
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|...+...+..+...+. ..++.++|++...++.... +....++++..|+..+... ...++++..++++.++.++
T Consensus 79 ~~Ty~el~~~v~~lA~~L~-~~Gv~~Gd~Vai~~~n~~e--~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~v 155 (666)
T PLN02614 79 WQTYQEVYDIVIKLGNSLR-SVGVKDEAKCGIYGANSPE--WIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIV 155 (666)
T ss_pred EeEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEE
Confidence 4688888887776665544 4688999999988885543 4446789999999888875 5788999999999999999
Q ss_pred eechHHHHHHHh
Q 039504 122 AVVPPLVLALAK 133 (240)
Q Consensus 122 ~~~p~~~~~l~~ 133 (240)
++....+..+..
T Consensus 156 i~~~~~~~~~~~ 167 (666)
T PLN02614 156 FVEEKKISELFK 167 (666)
T ss_pred EECHHHHHHHHH
Confidence 988776655543
No 157
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=87.78 E-value=4.1 Score=36.05 Aligned_cols=88 Identities=15% Similarity=0.027 Sum_probs=67.5
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
..+|...+...+..+...+. ..++.++|++..+++.... +....++++..|+..+... ....+++..++++.++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~-~~Gv~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 152 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIR-SRGVNPGDRCGIYGSNCPE--WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSI 152 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCE
Confidence 35788888888777666544 4588999999988875543 3345788999998888775 578899999999999999
Q ss_pred eeechHHHHHHH
Q 039504 121 AAVVPPLVLALA 132 (240)
Q Consensus 121 l~~~p~~~~~l~ 132 (240)
+++....+..+.
T Consensus 153 v~~~~~~~~~~~ 164 (660)
T PLN02861 153 AFVQESKISSIL 164 (660)
T ss_pred EEECHHHHHHHH
Confidence 998776655543
No 158
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=87.73 E-value=5.3 Score=33.77 Aligned_cols=84 Identities=20% Similarity=0.174 Sum_probs=62.7
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..+.+....+ ...+++++..|+..+..+ ......+.+.+++.+++.+
T Consensus 30 ~~Ty~~l~~~~~~~a~~L~-~~gv~~g~~V~l~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 106 (513)
T PRK07656 30 RLTYAELNARVRRAAAALA-ALGIGKGDRVAIWAPNSPHW--VIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKAL 106 (513)
T ss_pred ceeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCChHH--HHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEE
Confidence 4788888777666554433 34788999999888765432 235788999999888775 4778889999999999998
Q ss_pred eechHHHH
Q 039504 122 AVVPPLVL 129 (240)
Q Consensus 122 ~~~p~~~~ 129 (240)
........
T Consensus 107 i~~~~~~~ 114 (513)
T PRK07656 107 FVLGLFLG 114 (513)
T ss_pred EEchhhHH
Confidence 88766544
No 159
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=87.64 E-value=6 Score=33.56 Aligned_cols=84 Identities=12% Similarity=0.045 Sum_probs=63.5
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..+.+....+- ..+++++..|+..+... ...++++...+++.+++.+
T Consensus 37 ~~ty~~l~~~v~~la~~L~-~~g~~~~~~v~i~~~n~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 113 (517)
T PRK08008 37 RYSYLELNEEINRTANLFY-SLGIRKGDKVALHLDNCPEFI--FCWFGLAKIGAIMVPINARLLREESAWILQNSQASLL 113 (517)
T ss_pred eeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEE
Confidence 4677888777766655443 357889999998887654433 35778999998888775 5788999999999999998
Q ss_pred eechHHHH
Q 039504 122 AVVPPLVL 129 (240)
Q Consensus 122 ~~~p~~~~ 129 (240)
+..+....
T Consensus 114 ~~~~~~~~ 121 (517)
T PRK08008 114 VTSAQFYP 121 (517)
T ss_pred EEecchhH
Confidence 88776543
No 160
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=87.62 E-value=6.6 Score=28.91 Aligned_cols=89 Identities=18% Similarity=0.218 Sum_probs=54.0
Q ss_pred CcEEEEecch-HHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeechH------HHHHHHhCCCCCCC
Q 039504 69 GDVVLCVLPL-FHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVPP------LVLALAKNPMVADY 140 (240)
Q Consensus 69 ~d~~l~~~p~-~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~------~~~~l~~~~~~~~~ 140 (240)
+.+++.+.+- .|..|..+.-...-..|..++... ...++++.+.+.+.++.++..+-+ .+..+.+..+....
T Consensus 83 ~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~ 162 (201)
T cd02070 83 GKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGL 162 (201)
T ss_pred CeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCC
Confidence 3445555553 677777644444557788887664 578899999999999998766442 22333333222211
Q ss_pred CccchhhhhccCCCCCHHH
Q 039504 141 DLSSIRVVLSGAAPLGKEL 159 (240)
Q Consensus 141 ~~~~lr~v~~~G~~~~~~~ 159 (240)
...+ .|++||.+++.+.
T Consensus 163 -~~~~-~i~vGG~~~~~~~ 179 (201)
T cd02070 163 -RDKV-KVMVGGAPVNQEF 179 (201)
T ss_pred -CcCC-eEEEECCcCCHHH
Confidence 0122 3778888888754
No 161
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=87.53 E-value=3.4 Score=36.84 Aligned_cols=89 Identities=13% Similarity=0.029 Sum_probs=69.3
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
..+|...+...+..+..++. ..++.++|++..+++.... +....++++..|+..+... ...++++...+++.++.+
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~-~lG~~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 181 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLV-ALGHNKEERVAIFADTRAE--WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTT 181 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCE
Confidence 45788888887777666544 4688999999888875443 3346788999999888764 588899999999999999
Q ss_pred eeechHHHHHHHh
Q 039504 121 AAVVPPLVLALAK 133 (240)
Q Consensus 121 l~~~p~~~~~l~~ 133 (240)
+++....+..+.+
T Consensus 182 li~~~~~~~~l~~ 194 (696)
T PLN02387 182 VICDSKQLKKLID 194 (696)
T ss_pred EEECHHHHHHHHH
Confidence 9998877776654
No 162
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=87.52 E-value=2.2 Score=34.79 Aligned_cols=66 Identities=20% Similarity=0.185 Sum_probs=52.3
Q ss_pred ccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeechHHHHHH
Q 039504 64 LYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVPPLVLAL 131 (240)
Q Consensus 64 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 131 (240)
.++.++|++..++|.... +...+++++..|..++... ......+..++++.+++.+...+.....+
T Consensus 20 ~g~~~gd~v~l~~~n~~~--~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 20 GGVGPGDRVAVLLERSAE--LVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred hCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 468899999988886643 3335789999999988875 47788899999999999998887765544
No 163
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=87.37 E-value=4.9 Score=34.48 Aligned_cols=98 Identities=23% Similarity=0.265 Sum_probs=68.7
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.|+.++++..-.+ .++...+|..++......+...+. ..++.++|++..+++....+ ...+++++..|+..+..
T Consensus 37 ~p~~~A~~~~~~~---~~~~~~~Ty~el~~~~~~~a~~L~-~~g~~~g~~Val~~~n~~e~--~~~~la~~~~G~~~vpl 110 (547)
T PRK13295 37 CPDKTAVTAVRLG---TGAPRRFTYRELAALVDRVAVGLA-RLGVGRGDVVSCQLPNWWEF--TVLYLACSRIGAVLNPL 110 (547)
T ss_pred CCCceEEEecCCC---ccccceeeHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCChHH--HHHHHHHHhcCcEEecc
Confidence 3556666543322 233346888888777766655443 45789999999888865543 33578899999998877
Q ss_pred c-CCCHHHHHHHHHhccceeeeech
Q 039504 102 Q-KFEIGALLELIQRHRVSVAAVVP 125 (240)
Q Consensus 102 ~-~~~~~~~~~~i~~~~~t~l~~~p 125 (240)
. ....+++...+++.+++.+....
T Consensus 111 ~~~~~~~~l~~~l~~~~~~~li~~~ 135 (547)
T PRK13295 111 MPIFRERELSFMLKHAESKVLVVPK 135 (547)
T ss_pred ccccCHHHHHHHHHhcCceEEEEec
Confidence 5 47788899999999999887654
No 164
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=87.20 E-value=3.4 Score=35.58 Aligned_cols=85 Identities=14% Similarity=0.102 Sum_probs=64.9
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+....++.++|++..+++.... +...+++++..|+..+... .+..+++...+++.++..+
T Consensus 49 ~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~--~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 49 TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQ--YPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 578999888877776655323478999999998886543 3335789999999988875 4778899999999999998
Q ss_pred eechHHHH
Q 039504 122 AVVPPLVL 129 (240)
Q Consensus 122 ~~~p~~~~ 129 (240)
+.......
T Consensus 127 i~~~~~~~ 134 (562)
T PRK05677 127 VCLANMAH 134 (562)
T ss_pred EEecchhh
Confidence 87665443
No 165
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=87.19 E-value=3.2 Score=35.65 Aligned_cols=93 Identities=16% Similarity=0.152 Sum_probs=72.5
Q ss_pred eeeeehHHHHHHHHhhhcCCCC-CccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccc
Q 039504 41 GVVLTHKSLITSVAQQVDGENP-NLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRV 118 (240)
Q Consensus 41 ~v~~s~~~l~~~~~~~~~~~~~-~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~ 118 (240)
+..+|+.++...+..++..+.. .++++.+|++...+|....+.. ..++++..|+.+.... .++...+...++..++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~--~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~ 120 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVE--LALAVPMAGAVLNPLNPRLTASEIAKQLKDSKP 120 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCccccccCcccCHHHHHHHHHhcCC
Confidence 6788999998888776654432 2347899999999997665444 4678888888877764 5899999999999999
Q ss_pred eeeeechHHHHHHHhCC
Q 039504 119 SVAAVVPPLVLALAKNP 135 (240)
Q Consensus 119 t~l~~~p~~~~~l~~~~ 135 (240)
+++++....+..+....
T Consensus 121 kiif~d~~~~~~i~~~~ 137 (537)
T KOG1176|consen 121 KLIFVDEDFYDKISEAT 137 (537)
T ss_pred eEEEEcCchHHHHHHHH
Confidence 99999888877775543
No 166
>PLN02246 4-coumarate--CoA ligase
Probab=87.16 E-value=5.8 Score=33.92 Aligned_cols=85 Identities=18% Similarity=0.150 Sum_probs=63.4
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|+.++......+...+. ..++.++|++..+++-.. .+...+++++..|...+... .....++..++++.++..+
T Consensus 50 ~~ty~el~~~~~~la~~L~-~~g~~~gd~V~i~~~~~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 126 (537)
T PLN02246 50 VYTYADVELLSRRVAAGLH-KLGIRQGDVVMLLLPNCP--EFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLI 126 (537)
T ss_pred eeeHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEE
Confidence 5888888887766655443 357899999998877543 33346788889998888775 4778889999999999988
Q ss_pred eechHHHHH
Q 039504 122 AVVPPLVLA 130 (240)
Q Consensus 122 ~~~p~~~~~ 130 (240)
+........
T Consensus 127 i~~~~~~~~ 135 (537)
T PLN02246 127 ITQSCYVDK 135 (537)
T ss_pred EEccchHHH
Confidence 876655443
No 167
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=87.12 E-value=3.3 Score=35.02 Aligned_cols=86 Identities=16% Similarity=0.125 Sum_probs=64.3
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..+++....+- ..+++++..|...+... ....+++...+++.+++.+
T Consensus 25 ~~ty~~l~~~v~~~a~~l~-~~g~~~~~~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~ 101 (515)
T TIGR03098 25 TLTYAALSERVLALASGLR-GLGLARGERVAIYLDKRLETV--TAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLL 101 (515)
T ss_pred eeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHHHH--HHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEE
Confidence 5788888777766555443 357788999998887654433 35788999999888775 4788999999999999998
Q ss_pred eechHHHHHH
Q 039504 122 AVVPPLVLAL 131 (240)
Q Consensus 122 ~~~p~~~~~l 131 (240)
+..+.....+
T Consensus 102 i~~~~~~~~~ 111 (515)
T TIGR03098 102 VTSSERLDLL 111 (515)
T ss_pred EEccchhhhh
Confidence 8876554433
No 168
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=86.71 E-value=3.5 Score=35.30 Aligned_cols=88 Identities=18% Similarity=0.131 Sum_probs=66.3
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+...+++.++|++..+++... .+...+++++..|+..+..+ .....++...+++.+++.+
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 112 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP--QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVA 112 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEE
Confidence 47888888777666655443348899999998887543 34446789999999988875 4778899999999999998
Q ss_pred eechHHHHHHH
Q 039504 122 AVVPPLVLALA 132 (240)
Q Consensus 122 ~~~p~~~~~l~ 132 (240)
.........+.
T Consensus 113 i~~~~~~~~~~ 123 (546)
T PRK08314 113 IVGSELAPKVA 123 (546)
T ss_pred EEccchhhhHH
Confidence 88776655443
No 169
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=86.70 E-value=6.8 Score=29.20 Aligned_cols=92 Identities=20% Similarity=0.227 Sum_probs=60.1
Q ss_pred CCcEEEEecch-HHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeechHH------HHHHHhCCCCCC
Q 039504 68 NGDVVLCVLPL-FHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVPPL------VLALAKNPMVAD 139 (240)
Q Consensus 68 ~~d~~l~~~p~-~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~------~~~l~~~~~~~~ 139 (240)
.+.+++.+.+- .|..|....-...-..|..++... +..++++.+.+.+.++.++..+..+ ++.+.+..+..+
T Consensus 88 ~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~ 167 (213)
T cd02069 88 KGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRG 167 (213)
T ss_pred CCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcC
Confidence 34555555553 677787755556667888888886 5889999999999999987665432 222232222221
Q ss_pred CCccchhhhhccCCCCCHHHHHHH
Q 039504 140 YDLSSIRVVLSGAAPLGKELEDAL 163 (240)
Q Consensus 140 ~~~~~lr~v~~~G~~~~~~~~~~~ 163 (240)
. .++ +++||.+++++..+..
T Consensus 168 ~---~~~-i~vGG~~~~~~~~~~~ 187 (213)
T cd02069 168 I---KIP-LLIGGAATSRKHTAVK 187 (213)
T ss_pred C---CCe-EEEEChhcCHHHHhhh
Confidence 1 223 6788889998877653
No 170
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=86.58 E-value=6.5 Score=34.44 Aligned_cols=98 Identities=19% Similarity=0.206 Sum_probs=69.4
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.|+.++.+.. +..+| ..-.+|..++...+..+...+. ..++.++|++..++|..-.. ...+++++..|+..+..
T Consensus 66 ~p~~~A~~~~-~~~~~--~~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~~ 139 (629)
T PRK10524 66 RPEQLALIAV-STETD--EERTYTFRQLHDEVNRMAAMLR-SLGVQRGDRVLIYMPMIAEA--AFAMLACARIGAIHSVV 139 (629)
T ss_pred CCCCeEEEEE-cCCCC--ceEEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEee
Confidence 3556655442 21122 1345788888888777666554 45899999999998865432 23578889999888776
Q ss_pred c-CCCHHHHHHHHHhccceeeeech
Q 039504 102 Q-KFEIGALLELIQRHRVSVAAVVP 125 (240)
Q Consensus 102 ~-~~~~~~~~~~i~~~~~t~l~~~p 125 (240)
. .+..+++...+++.++.++++..
T Consensus 140 ~~~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 140 FGGFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEcc
Confidence 4 58889999999999999888754
No 171
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=86.47 E-value=5 Score=34.39 Aligned_cols=84 Identities=17% Similarity=0.105 Sum_probs=62.1
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++......+...+. ..++.++|++..+++....+- ..+++++..|+..+... ....+++...+++.++.++
T Consensus 55 ~~Ty~~l~~~~~~la~~L~-~~g~~~g~~V~i~~~~~~~~~--~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~ 131 (546)
T PLN02330 55 AVTYGEVVRDTRRFAKALR-SLGLRKGQVVVVVLPNVAEYG--IVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLI 131 (546)
T ss_pred cccHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCchHHH--HHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEE
Confidence 5788888777766655444 347889999998887655433 35788999999888765 4677889999999999988
Q ss_pred eechHHHH
Q 039504 122 AVVPPLVL 129 (240)
Q Consensus 122 ~~~p~~~~ 129 (240)
........
T Consensus 132 i~~~~~~~ 139 (546)
T PLN02330 132 VTNDTNYG 139 (546)
T ss_pred EEccchhh
Confidence 77655443
No 172
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=86.37 E-value=8.5 Score=26.41 Aligned_cols=94 Identities=17% Similarity=0.136 Sum_probs=58.3
Q ss_pred cEEEEecch-HHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeech------HHHHHHHhCCCCCCCC
Q 039504 70 DVVLCVLPL-FHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVP------PLVLALAKNPMVADYD 141 (240)
Q Consensus 70 d~~l~~~p~-~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p------~~~~~l~~~~~~~~~~ 141 (240)
.+++.+.+- .|..|........-..|..+++.. ...++++.+.+.++++.++..+. ..++.+.+..+.. .
T Consensus 5 ~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~--~ 82 (137)
T PRK02261 5 TVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEA--G 82 (137)
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhc--C
Confidence 344444443 677787755566668899888886 47789999999999999876653 1233333333222 2
Q ss_pred ccchhhhhccCCCC-----CHHHHHHHHHh
Q 039504 142 LSSIRVVLSGAAPL-----GKELEDALRSR 166 (240)
Q Consensus 142 ~~~lr~v~~~G~~~-----~~~~~~~~~~~ 166 (240)
++.+ .+++||... +++..+.+++.
T Consensus 83 ~~~~-~i~vGG~~~~~~~~~~~~~~~l~~~ 111 (137)
T PRK02261 83 LGDI-LLYVGGNLVVGKHDFEEVEKKFKEM 111 (137)
T ss_pred CCCC-eEEEECCCCCCccChHHHHHHHHHc
Confidence 2333 366677542 34566667664
No 173
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=86.32 E-value=3.2 Score=36.37 Aligned_cols=98 Identities=20% Similarity=0.168 Sum_probs=69.8
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.|+.++.+... ..+|. .-.+|..++...+..+...+. ..++.++|++..++|..-. +...+++++..|+..+..
T Consensus 65 ~p~~~Al~~~~-~~~~~--~~~~Ty~eL~~~v~~lA~~L~-~~Gv~~Gd~V~i~~~n~~e--~v~~~lA~~~~Gav~vpl 138 (628)
T TIGR02316 65 RGEQLALVTVS-SETGQ--ERTLTYRQLHREVNVFASALR-ALGVGRGDRVLIYMPMIAE--AVFAMLACARIGAIHSVV 138 (628)
T ss_pred CCCCeEEEEEc-CCCCc--eEEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHhCCEEEec
Confidence 35556554422 12221 235788998888877666554 4589999999999986543 333578899999888776
Q ss_pred c-CCCHHHHHHHHHhccceeeeech
Q 039504 102 Q-KFEIGALLELIQRHRVSVAAVVP 125 (240)
Q Consensus 102 ~-~~~~~~~~~~i~~~~~t~l~~~p 125 (240)
. .+..+++...+++.+++++++..
T Consensus 139 ~~~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 139 FGGFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCCCHHHHHHHHHhcCceEEEECC
Confidence 4 58889999999999999888754
No 174
>PRK13388 acyl-CoA synthetase; Provisional
Probab=86.25 E-value=6.9 Score=33.57 Aligned_cols=85 Identities=13% Similarity=-0.053 Sum_probs=62.9
Q ss_pred eeehHHHHHHHHhhhcCCCCCccc-cCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYL-TNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~-~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
.+|...+......+...+. ..++ .++|++...++.... +...+++++..|+..+..+ ....+++...+++.+++.
T Consensus 26 ~lTy~el~~~~~~la~~L~-~~g~~~~~~~V~i~~~n~~~--~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~ 102 (540)
T PRK13388 26 TWTWREVLAEAAARAAALI-ALADPDRPLHVGVLLGNTPE--MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQL 102 (540)
T ss_pred eeeHHHHHHHHHHHHHHHH-HhcCCCCCCEEEEECCCCcH--HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCE
Confidence 6788888887776665443 3466 688998888875443 3335788999999888775 477889999999999998
Q ss_pred eeechHHHHH
Q 039504 121 AAVVPPLVLA 130 (240)
Q Consensus 121 l~~~p~~~~~ 130 (240)
++........
T Consensus 103 ~i~~~~~~~~ 112 (540)
T PRK13388 103 LVTDAEHRPL 112 (540)
T ss_pred EEEChhhhHH
Confidence 8886655443
No 175
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=86.24 E-value=2.9 Score=35.03 Aligned_cols=107 Identities=18% Similarity=0.120 Sum_probs=72.7
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
..|-..+...+..++.++. .+|+.+||++..+.|.+.. |....+++...|..++... .+-.+++.=.+++.++.++
T Consensus 77 R~Tf~~~~~ev~slAaGll-~lGL~kGDrVgvwgpN~~~--w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l 153 (596)
T KOG1177|consen 77 RLTFSEFVSEVESLAAGLL-SLGLKKGDRVGVWGPNSYE--WVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKAL 153 (596)
T ss_pred hhhHHHHHHHHHHHHhhHH-hhcCCCCCEEEEecCChHH--HHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEE
Confidence 3556667777777777665 6799999999998886543 3344567777777777654 4666777778899999999
Q ss_pred eechHHH-----HHHHhCCC---------CCCCCccchhhhhccC
Q 039504 122 AVVPPLV-----LALAKNPM---------VADYDLSSIRVVLSGA 152 (240)
Q Consensus 122 ~~~p~~~-----~~l~~~~~---------~~~~~~~~lr~v~~~G 152 (240)
+..|.+. +.+.+.+. .+.+.++.++.++..+
T Consensus 154 ~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ 198 (596)
T KOG1177|consen 154 FAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILAD 198 (596)
T ss_pred EccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecC
Confidence 9888653 22333111 1235667777777766
No 176
>PRK05857 acyl-CoA synthetase; Validated
Probab=86.09 E-value=5.4 Score=34.21 Aligned_cols=83 Identities=18% Similarity=0.155 Sum_probs=62.9
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
..+|..++...+..+...+. ..++.++|++..+++....+- ..+++++..|+..+..+ ....+++.+.++..++..
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~-~~g~~~g~~V~i~~~~~~e~~--~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ 116 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLR-AQSVSRGSRVLVISDNGPETY--LSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAA 116 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHH-HhCcCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCce
Confidence 35888998887776665544 357889999998887654433 35789999999998875 477888899999888888
Q ss_pred eeechHH
Q 039504 121 AAVVPPL 127 (240)
Q Consensus 121 l~~~p~~ 127 (240)
++..+..
T Consensus 117 ii~~~~~ 123 (540)
T PRK05857 117 ALVAPGS 123 (540)
T ss_pred EEEeccc
Confidence 8776643
No 177
>PRK07798 acyl-CoA synthetase; Validated
Probab=85.97 E-value=8.3 Score=32.74 Aligned_cols=88 Identities=15% Similarity=-0.003 Sum_probs=64.7
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
-.+|..++...+..+...+. ..++.++|++..+++... .+...+++++..|+..+..+ ....+++...+++.++..
T Consensus 27 ~~~ty~el~~~~~~la~~L~-~~g~~~~~~v~v~~~n~~--~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 103 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLI-AQGLGPGDHVGIYARNRI--EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVA 103 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCE
Confidence 35788888777766665443 457889999888876443 33345788899999888775 477888999999999998
Q ss_pred eeechHHHHHHH
Q 039504 121 AAVVPPLVLALA 132 (240)
Q Consensus 121 l~~~p~~~~~l~ 132 (240)
++........+.
T Consensus 104 ~~~~~~~~~~~~ 115 (533)
T PRK07798 104 LVYEREFAPRVA 115 (533)
T ss_pred EEEchhhHHHHH
Confidence 888776554443
No 178
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=85.52 E-value=5.9 Score=33.95 Aligned_cols=79 Identities=15% Similarity=0.146 Sum_probs=60.3
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..++|.... +...+++++..|+.++... ....+++...++..++.++
T Consensus 49 ~~Ty~~l~~~v~~la~~l~-~~G~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 125 (547)
T PRK06087 49 SYTYSALDHAASRLANWLL-AKGIEPGDRVAFQLPGWCE--FTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMF 125 (547)
T ss_pred EEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEE
Confidence 4788888877766655444 4588999999988875543 3335789999999888775 4778889999999999887
Q ss_pred eec
Q 039504 122 AVV 124 (240)
Q Consensus 122 ~~~ 124 (240)
++.
T Consensus 126 ~~~ 128 (547)
T PRK06087 126 FAP 128 (547)
T ss_pred EEe
Confidence 764
No 179
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=85.48 E-value=5.2 Score=34.32 Aligned_cols=88 Identities=16% Similarity=0.080 Sum_probs=67.1
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|...+...+..+...+. ..++.+++++..+.+....+ ....++++..|+..+... ....+++...+++.+++.+
T Consensus 46 ~~Ty~el~~~v~~la~~L~-~~gi~~g~~V~v~~~n~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l 122 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALA-AAGVKRGDRVALMCGNRIEF--LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLL 122 (542)
T ss_pred cccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCChHH--HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEE
Confidence 5788888777766665443 45788999999888765443 335789999999888775 5788999999999999999
Q ss_pred eechHHHHHHHh
Q 039504 122 AVVPPLVLALAK 133 (240)
Q Consensus 122 ~~~p~~~~~l~~ 133 (240)
+........+.+
T Consensus 123 ~~~~~~~~~~~~ 134 (542)
T PRK06155 123 VVEAALLAALEA 134 (542)
T ss_pred EEChhhHHHHHH
Confidence 888776655433
No 180
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=85.48 E-value=4.5 Score=34.93 Aligned_cols=86 Identities=24% Similarity=0.197 Sum_probs=65.3
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..+.+.... +...+++++..|+..+... ....+.+...+++.+++.+
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~-~~gi~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 133 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLR-ALGVRPGDRVAIVLPNCPQ--HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVA 133 (573)
T ss_pred cccHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEE
Confidence 4788888777766655443 4578899999988876543 3335788999999988775 5888999999999999999
Q ss_pred eechHHHHHH
Q 039504 122 AVVPPLVLAL 131 (240)
Q Consensus 122 ~~~p~~~~~l 131 (240)
+........+
T Consensus 134 i~~~~~~~~~ 143 (573)
T PRK05605 134 IVWDKVAPTV 143 (573)
T ss_pred EechhhHHHH
Confidence 8877655544
No 181
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=85.44 E-value=11 Score=32.49 Aligned_cols=82 Identities=10% Similarity=0.015 Sum_probs=62.4
Q ss_pred eehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceeee
Q 039504 44 LTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVAA 122 (240)
Q Consensus 44 ~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l~ 122 (240)
+|...+...+..+...+. -.++|++..++|....+ ...+++++..|+..+.... ...+++...+++.++++++
T Consensus 46 ~Ty~el~~~~~~lA~~L~----~~~gd~Val~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii 119 (539)
T PRK06334 46 LSYNQVRKAVIALATKVS----KYPDQHIGIMMPASAGA--YIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVL 119 (539)
T ss_pred ccHHHHHHHHHHHHHHHh----hccCCeEEEEcCCchHH--HHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEE
Confidence 788888888777766443 25899999888865443 3357899999998888754 6778999999999999988
Q ss_pred echHHHHHH
Q 039504 123 VVPPLVLAL 131 (240)
Q Consensus 123 ~~p~~~~~l 131 (240)
+....+..+
T Consensus 120 ~~~~~~~~~ 128 (539)
T PRK06334 120 TSKQLMQHL 128 (539)
T ss_pred ehHHHHHHH
Confidence 877665544
No 182
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=85.32 E-value=4 Score=35.08 Aligned_cols=85 Identities=21% Similarity=0.138 Sum_probs=63.2
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|...+......+...+....++.++|++..+++.... +...+++++..|+..+... .+..+++...+++.+++.+
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~v 127 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQ--YPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVL 127 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH--HHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEE
Confidence 478888877776665543213578999999988875543 3335788999999998765 5788999999999999998
Q ss_pred eechHHHH
Q 039504 122 AVVPPLVL 129 (240)
Q Consensus 122 ~~~p~~~~ 129 (240)
+.......
T Consensus 128 i~~~~~~~ 135 (560)
T PRK08751 128 VVIDNFGT 135 (560)
T ss_pred EEcchhHH
Confidence 88765543
No 183
>PRK07514 malonyl-CoA synthase; Validated
Probab=85.22 E-value=5.6 Score=33.58 Aligned_cols=86 Identities=20% Similarity=0.144 Sum_probs=64.3
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
..+|...+...+..+...+. ..++.++|++...++... .+...+++++..|+..+... .....++...+++.+++.
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~-~~g~~~gd~v~i~~~~~~--e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 103 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLV-ALGVKPGDRVAVQVEKSP--EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPAL 103 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcE
Confidence 36788888777666555443 457899999998887553 33345788999998888775 478889999999999999
Q ss_pred eeechHHHHH
Q 039504 121 AAVVPPLVLA 130 (240)
Q Consensus 121 l~~~p~~~~~ 130 (240)
+...+.....
T Consensus 104 ii~~~~~~~~ 113 (504)
T PRK07514 104 VVCDPANFAW 113 (504)
T ss_pred EEEccchhHH
Confidence 8887765543
No 184
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=85.15 E-value=9.3 Score=33.05 Aligned_cols=88 Identities=16% Similarity=0.075 Sum_probs=66.0
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
-.+|..++...+..+...+....+++++|++...++..... ...+++++..|+..+... ....+.+...++..+++.
T Consensus 37 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~--~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (576)
T PRK05620 37 EQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEH--LEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEV 114 (576)
T ss_pred EEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHH--HHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcE
Confidence 46788888887777666553235788999999888754432 235788888998888775 477899999999999999
Q ss_pred eeechHHHHHH
Q 039504 121 AAVVPPLVLAL 131 (240)
Q Consensus 121 l~~~p~~~~~l 131 (240)
+++.+.....+
T Consensus 115 ~i~~~~~~~~~ 125 (576)
T PRK05620 115 IVADPRLAEQL 125 (576)
T ss_pred EEEChhhHHHH
Confidence 98877665543
No 185
>PRK13383 acyl-CoA synthetase; Provisional
Probab=85.10 E-value=5.7 Score=33.78 Aligned_cols=87 Identities=15% Similarity=0.127 Sum_probs=65.1
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++...++..- .+...+++++..|+..+..++ ...+.+...+++.+++.+
T Consensus 60 ~lTy~el~~~~~~la~~L~-~~gi~~g~~V~i~~~~~~--~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~i 136 (516)
T PRK13383 60 ALSYRELQRATESLARRLT-RDGVAPGRAVGVMCRNGR--GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTV 136 (516)
T ss_pred cEeHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCH--HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEE
Confidence 4788888777766665444 347899999998886443 333357789999999988764 788999999999999999
Q ss_pred eechHHHHHHH
Q 039504 122 AVVPPLVLALA 132 (240)
Q Consensus 122 ~~~p~~~~~l~ 132 (240)
...+.....+.
T Consensus 137 i~~~~~~~~~~ 147 (516)
T PRK13383 137 VADNEFAERIA 147 (516)
T ss_pred EEchhHHHHHH
Confidence 98776655543
No 186
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=85.04 E-value=3.2 Score=35.85 Aligned_cols=86 Identities=23% Similarity=0.202 Sum_probs=65.5
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
..+|..++...+..+...+. ..++.++|++...++.... +...+++++..|+..+... .+.++++...+++.+++.
T Consensus 72 ~~~Ty~el~~~v~~~A~~L~-~~gv~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ 148 (570)
T PRK04319 72 EKYTYKELKELSNKFANVLK-ELGVEKGDRVFIFMPRIPE--LYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKV 148 (570)
T ss_pred eeecHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcE
Confidence 35788888877766655443 4578999999988875543 3335789999999888764 578899999999999999
Q ss_pred eeechHHHHH
Q 039504 121 AAVVPPLVLA 130 (240)
Q Consensus 121 l~~~p~~~~~ 130 (240)
++..+..+..
T Consensus 149 ii~~~~~~~~ 158 (570)
T PRK04319 149 LITTPALLER 158 (570)
T ss_pred EEEChhhhhc
Confidence 8887776543
No 187
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=85.02 E-value=8.8 Score=33.40 Aligned_cols=86 Identities=17% Similarity=0.063 Sum_probs=63.4
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..+++.... +...+++++..|+..+..+ ....+.+...+++.+++++
T Consensus 62 ~~Ty~eL~~~~~~la~~L~-~~g~~~gd~V~i~~~n~~~--~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 138 (600)
T PRK08279 62 SISYAELNARANRYAHWAA-ARGVGKGDVVALLMENRPE--YLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHL 138 (600)
T ss_pred cccHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEE
Confidence 4788888777766555433 3578899999988875543 3346789999998888775 4677888999999999998
Q ss_pred eechHHHHHH
Q 039504 122 AVVPPLVLAL 131 (240)
Q Consensus 122 ~~~p~~~~~l 131 (240)
+........+
T Consensus 139 i~~~~~~~~~ 148 (600)
T PRK08279 139 IVGEELVEAF 148 (600)
T ss_pred EEChHHHHHH
Confidence 8876554433
No 188
>PRK05850 acyl-CoA synthetase; Validated
Probab=84.78 E-value=11 Score=32.48 Aligned_cols=86 Identities=15% Similarity=0.102 Sum_probs=63.9
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC----CCHHHHHHHHHhcc
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK----FEIGALLELIQRHR 117 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~ 117 (240)
..+|...+...+..+...+. ..+ .++|++..+++... .+...+++++..|+..+..+. ...+++...+++.+
T Consensus 34 ~~lty~eL~~~v~~~A~~L~-~~g-~~gd~V~l~~~n~~--~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~ 109 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELR-RHG-STGDRAVILAPQGL--EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTS 109 (578)
T ss_pred eeecHHHHHHHHHHHHHHHH-HhC-CCCCEEEEEcCCcc--cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcC
Confidence 46888888877766655444 234 57899988888554 344468899999999988863 35678999999999
Q ss_pred ceeeeechHHHHHH
Q 039504 118 VSVAAVVPPLVLAL 131 (240)
Q Consensus 118 ~t~l~~~p~~~~~l 131 (240)
+.+++..+.....+
T Consensus 110 ~~~il~~~~~~~~~ 123 (578)
T PRK05850 110 PSVVLTTSAVVDDV 123 (578)
T ss_pred CCEEEEcHHHHHHH
Confidence 99999887766554
No 189
>PRK09088 acyl-CoA synthetase; Validated
Probab=84.66 E-value=8.6 Score=32.35 Aligned_cols=80 Identities=14% Similarity=0.027 Sum_probs=60.2
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..+++.... +...+++++..|+..+... ....+.+...+++.+++.+
T Consensus 22 ~~ty~~l~~~v~~~a~~l~-~~g~~~~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~i 98 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLR-RRGCVDGERLAVLARNSVW--LVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLL 98 (488)
T ss_pred EEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEE
Confidence 5788888777766555443 4578899999888875544 3335788999998888775 4788899999999999988
Q ss_pred eech
Q 039504 122 AVVP 125 (240)
Q Consensus 122 ~~~p 125 (240)
+...
T Consensus 99 i~~~ 102 (488)
T PRK09088 99 LGDD 102 (488)
T ss_pred EEcc
Confidence 7654
No 190
>PRK13391 acyl-CoA synthetase; Provisional
Probab=84.27 E-value=11 Score=31.98 Aligned_cols=98 Identities=16% Similarity=0.107 Sum_probs=69.8
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.|+.++.+...++ ..+|..++...+..+...+. ..++.+++++..+.+.... +...+++++..|...+..
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~-~~g~~~~~~V~v~~~~~~~--~~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFR-SLGLKRGDHVAIFMENNLR--YLEVCWAAERSGLYYTCV 79 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHHhccEEecc
Confidence 3556666554443 24788888777766655444 3478889999888775543 333577899999888877
Q ss_pred c-CCCHHHHHHHHHhccceeeeechHHHH
Q 039504 102 Q-KFEIGALLELIQRHRVSVAAVVPPLVL 129 (240)
Q Consensus 102 ~-~~~~~~~~~~i~~~~~t~l~~~p~~~~ 129 (240)
+ ......+...+++.++..+.+.+....
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~ 108 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKLD 108 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhHH
Confidence 5 477889999999999998888775544
No 191
>PRK08315 AMP-binding domain protein; Validated
Probab=84.20 E-value=7.4 Score=33.41 Aligned_cols=81 Identities=14% Similarity=0.099 Sum_probs=61.1
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|+.++......+...+. ..++.++|++..+.+.... +...+++++..|+..+..++ ....++...+++.+++.+
T Consensus 43 ~~Ty~~l~~~~~~~a~~L~-~~gi~~g~~V~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 119 (559)
T PRK08315 43 RWTYREFNEEVDALAKGLL-ALGIEKGDRVGIWAPNVPE--WVLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKAL 119 (559)
T ss_pred EEcHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCChH--HHHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEE
Confidence 4788888777666555433 3578999999888775543 33467899999999988754 778889999999999988
Q ss_pred eechH
Q 039504 122 AVVPP 126 (240)
Q Consensus 122 ~~~p~ 126 (240)
+....
T Consensus 120 i~~~~ 124 (559)
T PRK08315 120 IAADG 124 (559)
T ss_pred EEecc
Confidence 77653
No 192
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=83.27 E-value=6.3 Score=33.87 Aligned_cols=85 Identities=16% Similarity=0.124 Sum_probs=64.1
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
..+|..++......+...+. ..++.++|++..+++.....- ..+++++..|+..+... ....+++...+++.+++.
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~-~~gi~~gd~V~i~~~n~~~~~--~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~ 123 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQ-SRGLAKGARVAIMMPNVLQYP--VAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEA 123 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCCHHHH--HHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceE
Confidence 35788998887766665444 347899999998887554332 35689999999998775 467889999999999999
Q ss_pred eeechHHHH
Q 039504 121 AAVVPPLVL 129 (240)
Q Consensus 121 l~~~p~~~~ 129 (240)
++....+..
T Consensus 124 vi~~~~~~~ 132 (557)
T PRK07059 124 IVVLENFAT 132 (557)
T ss_pred EEEchhhHH
Confidence 888765543
No 193
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=83.10 E-value=4.9 Score=34.67 Aligned_cols=81 Identities=21% Similarity=0.151 Sum_probs=62.0
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++...++....+- ..+++++..|+..+... ....+++...+++.+++.+
T Consensus 32 ~~Ty~el~~~~~~la~~L~-~~Gv~~gd~V~v~~~n~~~~~--~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i 108 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLL-RLGLRNGDVVAIAALNSDLYL--EWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVML 108 (563)
T ss_pred eeeHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCCHHHH--HHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEE
Confidence 4788888887766665444 458899999998887654333 35788899999888875 4788999999999999988
Q ss_pred eechH
Q 039504 122 AVVPP 126 (240)
Q Consensus 122 ~~~p~ 126 (240)
+....
T Consensus 109 ~~~~~ 113 (563)
T PLN02860 109 VTDET 113 (563)
T ss_pred EEecc
Confidence 87653
No 194
>PRK08162 acyl-CoA synthetase; Validated
Probab=82.98 E-value=6.2 Score=33.79 Aligned_cols=86 Identities=13% Similarity=0.110 Sum_probs=65.7
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++....+.... +...+++++..|+..+... ....+++...+++.+++.+
T Consensus 43 ~~ty~~L~~~~~~~a~~L~-~~g~~~g~~v~i~~~~~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 119 (545)
T PRK08162 43 RRTWAETYARCRRLASALA-RRGIGRGDTVAVLLPNIPA--MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVL 119 (545)
T ss_pred EEEHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCchH--HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEE
Confidence 5889998887776665444 3578899999988876543 3345788999998888775 4788999999999999999
Q ss_pred eechHHHHHH
Q 039504 122 AVVPPLVLAL 131 (240)
Q Consensus 122 ~~~p~~~~~l 131 (240)
+..+.....+
T Consensus 120 ~~~~~~~~~~ 129 (545)
T PRK08162 120 IVDTEFAEVA 129 (545)
T ss_pred EEccchhhHH
Confidence 8877665443
No 195
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=82.39 E-value=6.7 Score=33.05 Aligned_cols=58 Identities=26% Similarity=0.291 Sum_probs=43.0
Q ss_pred ccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc----CCCHHHHHHHHHhccceeeeechHHH
Q 039504 66 LTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ----KFEIGALLELIQRHRVSVAAVVPPLV 128 (240)
Q Consensus 66 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~l~~~p~~~ 128 (240)
..+||+++.--|.++. ..-..-..|..++..+ +.+++.+-+.++++++..++.+|++-
T Consensus 176 ~~pGd~v~vE~PtY~~-----~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~q 237 (459)
T COG1167 176 LDPGDTVLVEDPTYPG-----ALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQ 237 (459)
T ss_pred CCCCCEEEEcCCCcHH-----HHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCC
Confidence 3689999887775543 2234445677777653 48899999999999999999999763
No 196
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=82.19 E-value=9.9 Score=32.11 Aligned_cols=86 Identities=20% Similarity=0.179 Sum_probs=62.8
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++....+..... ...+++++..|+..+..+ .+....+...+++.+++.+
T Consensus 11 ~~ty~el~~~v~~~a~~L~-~~g~~~~~~V~i~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~i 87 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLR-ALGLREGDVVAILLENNPEF--FEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVL 87 (502)
T ss_pred EEEHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeCCCHHH--HHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEE
Confidence 4777777776666555443 35788999999888755432 235788999998888775 4777888999999999988
Q ss_pred eechHHHHHH
Q 039504 122 AVVPPLVLAL 131 (240)
Q Consensus 122 ~~~p~~~~~l 131 (240)
+........+
T Consensus 88 i~~~~~~~~~ 97 (502)
T PRK08276 88 IVSAALADTA 97 (502)
T ss_pred EEccchhhHH
Confidence 8877655443
No 197
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=82.14 E-value=6.6 Score=33.84 Aligned_cols=84 Identities=15% Similarity=0.111 Sum_probs=62.4
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
..+|..++......+...+....++.++|++..+++.... +...+++++..|+..+... ....+++...+++.++..
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e--~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~ 125 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQ--YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARA 125 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceE
Confidence 3578888877776666544322378899999988875443 3346789999998888775 477899999999999998
Q ss_pred eeechHH
Q 039504 121 AAVVPPL 127 (240)
Q Consensus 121 l~~~p~~ 127 (240)
+...+.+
T Consensus 126 ~i~~~~~ 132 (562)
T PRK12492 126 LVYLNMF 132 (562)
T ss_pred EEecccc
Confidence 8875543
No 198
>PRK12583 acyl-CoA synthetase; Provisional
Probab=81.89 E-value=12 Score=32.14 Aligned_cols=81 Identities=17% Similarity=0.110 Sum_probs=61.3
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|...+...+..+...+. ..++.++|++..+.+.... +....++++..|+..+... .....++...+++.+++.+
T Consensus 45 ~~Ty~~l~~~~~~~a~~L~-~~gi~~g~~V~i~~~~~~~--~~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 121 (558)
T PRK12583 45 RYTWRQLADAVDRLARGLL-ALGVQPGDRVGIWAPNCAE--WLLTQFATARIGAILVNINPAYRASELEYALGQSGVRWV 121 (558)
T ss_pred EecHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCChH--HHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEE
Confidence 4788888777766555433 3478899999888875443 3335788999999988765 4788999999999999988
Q ss_pred eechH
Q 039504 122 AVVPP 126 (240)
Q Consensus 122 ~~~p~ 126 (240)
++.+.
T Consensus 122 i~~~~ 126 (558)
T PRK12583 122 ICADA 126 (558)
T ss_pred EEecc
Confidence 87653
No 199
>PRK13390 acyl-CoA synthetase; Provisional
Probab=81.83 E-value=18 Score=30.59 Aligned_cols=94 Identities=18% Similarity=0.149 Sum_probs=66.4
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.|+.++.+....| ..+|..++...+..+...+. ..++.++|++..+.+.... +...+++++..|+..+..
T Consensus 10 ~p~~~a~~~~~~~-------~~lTy~el~~~~~~la~~L~-~~gv~~gd~V~i~~~n~~~--~~~~~la~~~~Ga~~~~l 79 (501)
T PRK13390 10 APDRPAVIVAETG-------EQVSYRQLDDDSAALARVLY-DAGLRTGDVVALLSDNSPE--ALVVLWAALRSGLYITAI 79 (501)
T ss_pred CCCCcEEEecCCC-------eEeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEecc
Confidence 3566665542222 35888998887777665544 4578999999988875543 333578899999888876
Q ss_pred c-CCCHHHHHHHHHhccceeeeech
Q 039504 102 Q-KFEIGALLELIQRHRVSVAAVVP 125 (240)
Q Consensus 102 ~-~~~~~~~~~~i~~~~~t~l~~~p 125 (240)
. ...+.++..++++.++..+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~ 104 (501)
T PRK13390 80 NHHLTAPEADYIVGDSGARVLVASA 104 (501)
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEcc
Confidence 5 47788888888888888776644
No 200
>PRK07867 acyl-CoA synthetase; Validated
Probab=81.76 E-value=8.5 Score=32.96 Aligned_cols=85 Identities=13% Similarity=-0.007 Sum_probs=63.1
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|...+...+..+...+....+..+++++..+++... .+...+++++..|..++... ...++++...+++.+++.+
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 105 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP--EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLV 105 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH--HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEE
Confidence 47888888887776665442235677888887777443 33345789999999998775 4778899999999999999
Q ss_pred eechHHHH
Q 039504 122 AVVPPLVL 129 (240)
Q Consensus 122 ~~~p~~~~ 129 (240)
+.......
T Consensus 106 i~~~~~~~ 113 (529)
T PRK07867 106 LTESAHAE 113 (529)
T ss_pred EECHhHHH
Confidence 88876554
No 201
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=81.53 E-value=9.8 Score=33.72 Aligned_cols=87 Identities=11% Similarity=-0.061 Sum_probs=65.4
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..+++...- +....++++..|+..+... ...++++...++..+++++
T Consensus 76 ~~Ty~el~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~e--w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v 152 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALR-ASGAEPGSRVGIYGSNCPQ--WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFV 152 (660)
T ss_pred EEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEE
Confidence 3688888887766665443 4588999999988875443 4445788999998888765 4788999999999999999
Q ss_pred eechHHHHHHH
Q 039504 122 AVVPPLVLALA 132 (240)
Q Consensus 122 ~~~p~~~~~l~ 132 (240)
++....+..+.
T Consensus 153 ~~~~~~~~~~~ 163 (660)
T PLN02430 153 FVQDKKIKELL 163 (660)
T ss_pred EECHHHHHHHH
Confidence 98776544433
No 202
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=81.06 E-value=16 Score=31.48 Aligned_cols=81 Identities=21% Similarity=0.204 Sum_probs=62.9
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|...+...+..+...+. ..++.++|++..+++...-+- ..+++++..|+..+...+ ..+.++...++..++..+
T Consensus 38 ~~Ty~el~~~~~~~A~~L~-~~~v~~gdrVail~~N~~e~~--~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~ 114 (534)
T COG0318 38 RLTYRELDRRANRLAAALQ-ALGVKPGDRVAILLPNSPEFL--IAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVL 114 (534)
T ss_pred eeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHHH--HHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEE
Confidence 6888898888777665444 234789999998888654433 357899999999988864 678889999999999988
Q ss_pred eechH
Q 039504 122 AVVPP 126 (240)
Q Consensus 122 ~~~p~ 126 (240)
+....
T Consensus 115 ~~~~~ 119 (534)
T COG0318 115 ITSAE 119 (534)
T ss_pred EEccc
Confidence 88776
No 203
>PRK06178 acyl-CoA synthetase; Validated
Probab=80.66 E-value=9.2 Score=32.97 Aligned_cols=87 Identities=18% Similarity=0.104 Sum_probs=64.8
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.+++++...++.... +...+++++..|+..+... ......+...+++.++..+
T Consensus 58 ~~Ty~~l~~~~~~la~~L~-~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~i 134 (567)
T PRK06178 58 VITYAELDELSDRFAALLR-QRGVGAGDRVAVFLPNCPQ--FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVL 134 (567)
T ss_pred eeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCcH--HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEE
Confidence 5788888777666554443 3478899999888876543 3335788899998888765 4778899999999999999
Q ss_pred eechHHHHHHH
Q 039504 122 AVVPPLVLALA 132 (240)
Q Consensus 122 ~~~p~~~~~l~ 132 (240)
.........+.
T Consensus 135 i~~~~~~~~l~ 145 (567)
T PRK06178 135 LALDQLAPVVE 145 (567)
T ss_pred EEccchHHHHH
Confidence 98887665443
No 204
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=80.62 E-value=23 Score=29.73 Aligned_cols=83 Identities=17% Similarity=0.092 Sum_probs=62.1
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|...+...+..+...+. ..++.++|++...++-... +...+++++..|+..+..+. ....++...+++.++..+
T Consensus 27 ~~Ty~el~~~~~~~a~~L~-~~g~~~~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~v 103 (483)
T PRK03640 27 KVTFMELHEAVVSVAGKLA-ALGVKKGDRVALLMKNGME--MILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKCL 103 (483)
T ss_pred eeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCEE
Confidence 5788888777766554433 3568899999988876544 33467899999999988864 788889999999998887
Q ss_pred eechHHH
Q 039504 122 AVVPPLV 128 (240)
Q Consensus 122 ~~~p~~~ 128 (240)
.......
T Consensus 104 i~~~~~~ 110 (483)
T PRK03640 104 ITDDDFE 110 (483)
T ss_pred EEcchhh
Confidence 7655443
No 205
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=80.38 E-value=9.4 Score=32.36 Aligned_cols=87 Identities=17% Similarity=0.189 Sum_probs=63.9
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..+.|.... +....++++..|+..+... .....++..++++.+++.+
T Consensus 11 ~~Ty~el~~~~~~la~~l~-~~g~~~g~~V~v~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 87 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLA-ALGVRPGDCVALLMRNDFA--FFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVL 87 (509)
T ss_pred eecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEE
Confidence 4677777666655554433 4578899999988875543 3345788899999888875 4778899999999999999
Q ss_pred eechHHHHHHH
Q 039504 122 AVVPPLVLALA 132 (240)
Q Consensus 122 ~~~p~~~~~l~ 132 (240)
+........+.
T Consensus 88 ~~~~~~~~~~~ 98 (509)
T PRK12406 88 IAHADLLHGLA 98 (509)
T ss_pred EEccchhhhhh
Confidence 88776665443
No 206
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=80.19 E-value=11 Score=36.58 Aligned_cols=100 Identities=16% Similarity=0.069 Sum_probs=66.7
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.|+.++.+...+..........+|..++...+..+...+. ..++.+++++..+++-... +...+++++..|+..+..
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~-~~gv~~g~~V~i~~~~~~~--~i~~~lA~l~~G~~~vpl 325 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLL-KTGIKRGDVVMIYAYRGVD--LVVAVMGVLKAGATFSVI 325 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEecCCHH--HHHHHHHHHhhCcEEecc
Confidence 3566666543221101112345888888887766665443 3578899999988875543 333678999999998887
Q ss_pred cC-CCHHHHHHHHHhccceeeeec
Q 039504 102 QK-FEIGALLELIQRHRVSVAAVV 124 (240)
Q Consensus 102 ~~-~~~~~~~~~i~~~~~t~l~~~ 124 (240)
++ ..++++...+++.++..++..
T Consensus 326 dp~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 326 DPAYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCCCcHHHHHHHHHhcCCCEEEEe
Confidence 65 667788888888888877654
No 207
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=80.18 E-value=7.4 Score=33.37 Aligned_cols=85 Identities=12% Similarity=-0.049 Sum_probs=62.8
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
..+|..++...+..+...+. ..++.++|++..+++.....- ..+++++..|+..+... ....+.+..++++.++..
T Consensus 38 ~~~Ty~el~~~v~~la~~L~-~~g~~~gd~v~i~~~~~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALD-RDGIKLGDRVATIAWNTWRHL--EAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRV 114 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchHHH--HHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCE
Confidence 35788888877766665444 457899999998877554333 35678888998888775 477889999999999998
Q ss_pred eeechHHHH
Q 039504 121 AAVVPPLVL 129 (240)
Q Consensus 121 l~~~p~~~~ 129 (240)
+++......
T Consensus 115 i~~~~~~~~ 123 (542)
T PRK06018 115 VITDLTFVP 123 (542)
T ss_pred EEEccccHH
Confidence 887654433
No 208
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=79.97 E-value=17 Score=24.94 Aligned_cols=94 Identities=13% Similarity=0.068 Sum_probs=55.6
Q ss_pred HHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeechH------HHHHHHhCCCCCCCCccchhhhhcc
Q 039504 79 FHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVPP------LVLALAKNPMVADYDLSSIRVVLSG 151 (240)
Q Consensus 79 ~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~------~~~~l~~~~~~~~~~~~~lr~v~~~ 151 (240)
.|..|........-..|..++... ...++++.+...++++.++..+.- .+..+.+..+..+ +... .+++|
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~g--l~~~-~vivG 89 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAG--LEGI-LLYVG 89 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCC--CCCC-EEEec
Confidence 567777644444556788888876 478899999999999987665331 2334443333322 2222 36788
Q ss_pred CCC-CCHHHHH----HHHHhCCCCccccccccc
Q 039504 152 AAP-LGKELED----ALRSRVPQAILGQGYGMT 179 (240)
Q Consensus 152 G~~-~~~~~~~----~~~~~~~~~~i~~~yG~t 179 (240)
|.+ ++++..+ ++++. + +-..||..
T Consensus 90 G~~vi~~~d~~~~~~~l~~~--G--v~~vF~pg 118 (134)
T TIGR01501 90 GNLVVGKQDFPDVEKRFKEM--G--FDRVFAPG 118 (134)
T ss_pred CCcCcChhhhHHHHHHHHHc--C--CCEEECcC
Confidence 864 4554433 45543 3 34456644
No 209
>PRK07470 acyl-CoA synthetase; Validated
Probab=79.87 E-value=11 Score=32.09 Aligned_cols=83 Identities=11% Similarity=0.059 Sum_probs=62.3
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..+.+... .+...+++++..|+..+..+ .....++...+++.+++.+
T Consensus 32 ~~Ty~el~~~~~~~a~~L~-~~g~~~g~~v~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~ 108 (528)
T PRK07470 32 SWTWREIDARVDALAAALA-ARGVRKGDRILVHSRNCN--QMFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAM 108 (528)
T ss_pred cccHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCCH--HHHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEE
Confidence 5788888777766655443 357889999988876544 34445789999998888775 4778899999999999998
Q ss_pred eechHHH
Q 039504 122 AVVPPLV 128 (240)
Q Consensus 122 ~~~p~~~ 128 (240)
+....+.
T Consensus 109 i~~~~~~ 115 (528)
T PRK07470 109 ICHADFP 115 (528)
T ss_pred EEcchhH
Confidence 8876544
No 210
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=79.26 E-value=32 Score=30.21 Aligned_cols=84 Identities=14% Similarity=0.022 Sum_probs=60.2
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc-cCC---CHHHHHHHHHhcc
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM-QKF---EIGALLELIQRHR 117 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~---~~~~~~~~i~~~~ 117 (240)
..+|..++...+..+...+... +.++|++..+++.... +...+++++..|+..+.. ... ..+++..++++.+
T Consensus 54 ~~~Ty~el~~~v~~lA~~L~~~--~~~gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~ 129 (631)
T PRK07769 54 RDLTWSQFGARNRAVGARLQQV--TKPGDRVAILAPQNLD--YLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCT 129 (631)
T ss_pred eEeeHHHHHHHHHHHHHHHHHh--cCCCCEEEEEcCCChH--HHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCC
Confidence 3578888888777666554322 6889999988876543 334578999999888765 322 2467888999999
Q ss_pred ceeeeechHHHH
Q 039504 118 VSVAAVVPPLVL 129 (240)
Q Consensus 118 ~t~l~~~p~~~~ 129 (240)
+..+++......
T Consensus 130 ~~~vi~~~~~~~ 141 (631)
T PRK07769 130 PSAILTTTDSAE 141 (631)
T ss_pred CCEEEEChHHHH
Confidence 998888776543
No 211
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=79.23 E-value=10 Score=32.46 Aligned_cols=84 Identities=10% Similarity=-0.087 Sum_probs=62.4
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++......+...+. ..++.++|++..+++.... +...+++++..|+..+... ...++++..++++.++..+
T Consensus 39 ~~Ty~el~~~~~~~a~~L~-~~g~~~~d~v~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 115 (539)
T PRK07008 39 RYTYRDCERRAKQLAQALA-ALGVEPGDRVGTLAWNGYR--HLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYV 115 (539)
T ss_pred EeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCcHH--HHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEE
Confidence 4788888777766655444 4578999999988875542 3335688889999888775 4778889999999999988
Q ss_pred eechHHHH
Q 039504 122 AVVPPLVL 129 (240)
Q Consensus 122 ~~~p~~~~ 129 (240)
...+.+..
T Consensus 116 ~~~~~~~~ 123 (539)
T PRK07008 116 LFDLTFLP 123 (539)
T ss_pred EEcchhHH
Confidence 77765543
No 212
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=79.17 E-value=8.4 Score=33.16 Aligned_cols=84 Identities=20% Similarity=0.210 Sum_probs=61.8
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++......+...+....++.+++++..+.+... .+...+++++..|...+..++ ...+.+.+.+++.+++.+
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 125 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLL--QYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAI 125 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEE
Confidence 56888887777666654432247889999988876543 333357899999999988754 678889999999999988
Q ss_pred eechHHH
Q 039504 122 AVVPPLV 128 (240)
Q Consensus 122 ~~~p~~~ 128 (240)
...+...
T Consensus 126 i~~~~~~ 132 (560)
T PRK08974 126 VIVSNFA 132 (560)
T ss_pred EEecccc
Confidence 8766543
No 213
>PLN02479 acetate-CoA ligase
Probab=78.81 E-value=14 Score=31.95 Aligned_cols=83 Identities=13% Similarity=0.115 Sum_probs=63.5
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..+.+..-. +...+++++..|+..+... ....+++...+++.++..+
T Consensus 45 ~~ty~eL~~~~~~lA~~L~-~~g~~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~i 121 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALA-KRSIGPGSTVAVIAPNIPA--MYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVV 121 (567)
T ss_pred eeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCcHH--HHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEE
Confidence 4788888887777665544 4478999999988875433 3335788899998888775 4778899999999999999
Q ss_pred eechHHH
Q 039504 122 AVVPPLV 128 (240)
Q Consensus 122 ~~~p~~~ 128 (240)
+.....+
T Consensus 122 i~~~~~~ 128 (567)
T PLN02479 122 MVDQEFF 128 (567)
T ss_pred EEchhhh
Confidence 8876653
No 214
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=78.73 E-value=18 Score=31.01 Aligned_cols=81 Identities=22% Similarity=0.197 Sum_probs=60.3
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 120 (240)
..+|..++......+...+. ..++.+++++..+++....+ ...+++++..|+..+... ....+++...+++.+++.
T Consensus 52 ~~~Ty~eL~~~~~~~a~~L~-~~g~~~g~~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 128 (538)
T TIGR03208 52 RRFSYRELDCRVDRIAVGLA-RLGVGRGDVVSFQLPNRWEF--TALYLACARIGAVLNPLMPIFRERELSFMLNHADSKV 128 (538)
T ss_pred ceecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHH--HHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeE
Confidence 35788888777766655443 45788999999888754433 235788899998888765 467888999999999998
Q ss_pred eeech
Q 039504 121 AAVVP 125 (240)
Q Consensus 121 l~~~p 125 (240)
++..+
T Consensus 129 li~~~ 133 (538)
T TIGR03208 129 FVVPS 133 (538)
T ss_pred EEEcc
Confidence 88755
No 215
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=78.68 E-value=15 Score=31.18 Aligned_cols=84 Identities=17% Similarity=0.129 Sum_probs=61.5
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++++++++...++-. ..+...+++++..|+..+..+ .+...++...+++.+++.+
T Consensus 30 ~~ty~~l~~~~~~~a~~L~-~~g~~~g~~v~l~~~~~--~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~ 106 (508)
T TIGR02262 30 SLSYGELEAQVRRLGAALR-RLGVKREERVLLLMLDG--VDFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVV 106 (508)
T ss_pred eeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCC--HHHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEE
Confidence 4677777766655554433 45788999988777644 344446788999999888775 4788999999999999998
Q ss_pred eechHHHH
Q 039504 122 AVVPPLVL 129 (240)
Q Consensus 122 ~~~p~~~~ 129 (240)
+.......
T Consensus 107 i~~~~~~~ 114 (508)
T TIGR02262 107 FVSGELLP 114 (508)
T ss_pred EEchhhHH
Confidence 87765443
No 216
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=78.42 E-value=14 Score=32.92 Aligned_cols=89 Identities=13% Similarity=-0.007 Sum_probs=67.8
Q ss_pred eeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc-cCCCHHHHHHHHHhccce
Q 039504 41 GVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM-QKFEIGALLELIQRHRVS 119 (240)
Q Consensus 41 ~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t 119 (240)
...+|...+...+..+...+. ..++.++|++..+++... .+....++++..|+..+.. ....++++...+++.++.
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~-~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~ 195 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLA-ELGLTKGSNVAIYEETRW--EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECK 195 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCcc
Confidence 467889988888877766554 468899999998887543 3444678888889877765 457888999999999999
Q ss_pred eeeechHHHHHHH
Q 039504 120 VAAVVPPLVLALA 132 (240)
Q Consensus 120 ~l~~~p~~~~~l~ 132 (240)
.+++....+..+.
T Consensus 196 ~lv~~~~~~~~l~ 208 (700)
T PTZ00216 196 AIVCNGKNVPNLL 208 (700)
T ss_pred EEEECHHHHHHHH
Confidence 9998776655544
No 217
>PRK12582 acyl-CoA synthetase; Provisional
Probab=78.09 E-value=8.4 Score=33.78 Aligned_cols=81 Identities=15% Similarity=0.071 Sum_probs=59.8
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CC-----HHHHHHHHHh
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FE-----IGALLELIQR 115 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~-----~~~~~~~i~~ 115 (240)
-.+|..++...+..+...+. ..++.++|++..+++... .+...+++++..|+..+...+ +. .+++...+++
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~-~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~ 155 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALL-DLGLDPGRPVMILSGNSI--EHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDL 155 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEecCCCH--HHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHh
Confidence 46888888887776665443 457899999999888543 333457899999999888754 33 3788889999
Q ss_pred ccceeeeech
Q 039504 116 HRVSVAAVVP 125 (240)
Q Consensus 116 ~~~t~l~~~p 125 (240)
.++..++...
T Consensus 156 ~~~~~vi~~~ 165 (624)
T PRK12582 156 VKPRVVFAQS 165 (624)
T ss_pred cCCcEEEecC
Confidence 8888777653
No 218
>PRK13382 acyl-CoA synthetase; Provisional
Probab=77.93 E-value=16 Score=31.39 Aligned_cols=83 Identities=23% Similarity=0.205 Sum_probs=62.1
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++......+...+. ..++.++|++..+++.... +...+++++..|+..+...+ ....++...+++.+++.+
T Consensus 68 ~~Ty~el~~~~~~~A~~L~-~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 144 (537)
T PRK13382 68 TLTWRELDERSDALAAALQ-ALPIGEPRVVGIMCRNHRG--FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTV 144 (537)
T ss_pred eecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEecCcHH--HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEE
Confidence 4777888777666655443 3478899999988875443 34467899999999888764 677889999999999988
Q ss_pred eechHHH
Q 039504 122 AVVPPLV 128 (240)
Q Consensus 122 ~~~p~~~ 128 (240)
+......
T Consensus 145 i~~~~~~ 151 (537)
T PRK13382 145 IYDEEFS 151 (537)
T ss_pred EEchhhH
Confidence 8765543
No 219
>PRK06164 acyl-CoA synthetase; Validated
Probab=77.77 E-value=7.7 Score=33.17 Aligned_cols=81 Identities=21% Similarity=0.202 Sum_probs=61.1
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|...+...+..+...+. ..++.++|++..+.+.... +...+++++..|+..+.... ....++...+++.+++.+
T Consensus 35 ~~Ty~~L~~~~~~~a~~L~-~~g~~~g~~V~i~~~n~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~i 111 (540)
T PRK06164 35 PLSRAELRALVDRLAAWLA-AQGVRRGDRVAVWLPNCIE--WVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWL 111 (540)
T ss_pred cccHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCcHH--HHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEE
Confidence 4788888777766655444 4578899999988876543 33357889999999888764 677889999999999988
Q ss_pred eechH
Q 039504 122 AVVPP 126 (240)
Q Consensus 122 ~~~p~ 126 (240)
+..+.
T Consensus 112 i~~~~ 116 (540)
T PRK06164 112 VVWPG 116 (540)
T ss_pred EEccc
Confidence 87554
No 220
>PTZ00297 pantothenate kinase; Provisional
Probab=77.76 E-value=14 Score=36.01 Aligned_cols=100 Identities=16% Similarity=0.071 Sum_probs=74.1
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccCCCHHHHHHHHHhccceeee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSVAA 122 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~ 122 (240)
.+|...+...+..+..++. .+++.++|++..+++... .+....++++..|+..+... ....++..++++.++++++
T Consensus 457 ~lTY~El~~~V~~lAa~L~-~lGV~~GDrVaIls~N~~--Ewvia~lA~~~~GaV~VPly-~t~~eL~yIL~~S~akvVf 532 (1452)
T PTZ00297 457 WLTYGTVDARARELGSGLL-ALGVRPGDVIGVDCEASR--NIVILEVACALYGFTTLPLV-GKGSTMRTLIDEHKIKVVF 532 (1452)
T ss_pred EEEHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCEEEeCC-CCHHHHHHHHHhcCCcEEE
Confidence 5888888888877666554 568999999998887543 34446788999998888874 3567899999999999999
Q ss_pred echHHHHHHHhCCCCCCCCccchhhhhccC
Q 039504 123 VVPPLVLALAKNPMVADYDLSSIRVVLSGA 152 (240)
Q Consensus 123 ~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G 152 (240)
+....+..+.+... +.+|.|++-.
T Consensus 533 v~~~~l~kl~~i~~------~~Lr~IIv~d 556 (1452)
T PTZ00297 533 ADRNSVAAILTCRS------RKLETVVYTH 556 (1452)
T ss_pred EchhHHHHHHhhcc------cCCcEEEEEC
Confidence 98887776655321 1466666643
No 221
>PRK06188 acyl-CoA synthetase; Validated
Probab=77.21 E-value=14 Score=31.39 Aligned_cols=82 Identities=16% Similarity=0.082 Sum_probs=61.1
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhcccee
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSV 120 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~ 120 (240)
..+|..++...+..+...+. ..++.+++++..+++.... +...+++++..|...+...+ ....++...+++.+++.
T Consensus 36 ~~~Ty~~l~~~~~~~a~~L~-~~gv~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 112 (524)
T PRK06188 36 TRLTYGQLADRISRYIQAFE-ALGLGTGDAVALLSLNRPE--VLMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGIST 112 (524)
T ss_pred CcccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceE
Confidence 35788888777665554333 3578899999888775443 33357899999999988754 67888999999999999
Q ss_pred eeechH
Q 039504 121 AAVVPP 126 (240)
Q Consensus 121 l~~~p~ 126 (240)
+...+.
T Consensus 113 ~~~~~~ 118 (524)
T PRK06188 113 LIVDPA 118 (524)
T ss_pred EEEecc
Confidence 888765
No 222
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=76.76 E-value=16 Score=32.01 Aligned_cols=85 Identities=15% Similarity=0.064 Sum_probs=62.8
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc-cC-CC--HHHHHHHHHhcc
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM-QK-FE--IGALLELIQRHR 117 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~-~~--~~~~~~~i~~~~ 117 (240)
..+|...+...+..+...+... +.++|++...++.... +...+++++..|+..+.. +. .. .+++...+++.+
T Consensus 67 ~~~Ty~el~~~~~~lA~~L~~~--~~~gd~V~l~~~n~~e--~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~ 142 (612)
T PRK12476 67 VELTWTQLGVRLRAVGARLQQV--AGPGDRVAILAPQGID--YVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAE 142 (612)
T ss_pred eEEeHHHHHHHHHHHHHHHHHh--cCCCCEEEEECCCChh--HHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCC
Confidence 3578888888777766655432 6899999988886543 444678999999988866 33 22 678899999999
Q ss_pred ceeeeechHHHHH
Q 039504 118 VSVAAVVPPLVLA 130 (240)
Q Consensus 118 ~t~l~~~p~~~~~ 130 (240)
+.++++.......
T Consensus 143 ~~~li~~~~~~~~ 155 (612)
T PRK12476 143 PTVVLTTTAAAEA 155 (612)
T ss_pred CCEEEEcHHHHHH
Confidence 9999987765543
No 223
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=76.23 E-value=15 Score=24.55 Aligned_cols=84 Identities=15% Similarity=0.064 Sum_probs=50.8
Q ss_pred HHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceeeeechH------HHHHHHhCCCCCCCCccchhhhhcc
Q 039504 79 FHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVAAVVPP------LVLALAKNPMVADYDLSSIRVVLSG 151 (240)
Q Consensus 79 ~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l~~~p~------~~~~l~~~~~~~~~~~~~lr~v~~~ 151 (240)
.|..|..+.....-..|..++.... ..++++.+.+.+.++.++..... .++.+.+..+... ++.++ +++|
T Consensus 11 ~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~--~~~i~-i~~G 87 (122)
T cd02071 11 GHDRGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELG--AGDIL-VVGG 87 (122)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcC--CCCCE-EEEE
Confidence 5666776555555577888877764 67799999999999998776532 2233333322221 12222 5566
Q ss_pred CCCCCHHHHHHHHHh
Q 039504 152 AAPLGKELEDALRSR 166 (240)
Q Consensus 152 G~~~~~~~~~~~~~~ 166 (240)
|. .+++..+++++.
T Consensus 88 G~-~~~~~~~~~~~~ 101 (122)
T cd02071 88 GI-IPPEDYELLKEM 101 (122)
T ss_pred CC-CCHHHHHHHHHC
Confidence 65 456666666664
No 224
>PRK05852 acyl-CoA synthetase; Validated
Probab=76.07 E-value=12 Score=32.03 Aligned_cols=78 Identities=18% Similarity=0.085 Sum_probs=58.9
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..+++.... +...+++++..|...+..+ .....++...++..+++.+
T Consensus 43 ~~Ty~~l~~~~~~~a~~L~-~~gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 119 (534)
T PRK05852 43 AISYRDLARLVDDLAGQLT-RSGLLPGDRVALRMGSNAE--FVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVV 119 (534)
T ss_pred cccHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCcHH--HHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEE
Confidence 4778888777666655444 4578999999988875443 3336789999999888775 4778889999999999988
Q ss_pred ee
Q 039504 122 AV 123 (240)
Q Consensus 122 ~~ 123 (240)
+.
T Consensus 120 i~ 121 (534)
T PRK05852 120 LI 121 (534)
T ss_pred EE
Confidence 74
No 225
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=75.23 E-value=11 Score=32.88 Aligned_cols=81 Identities=11% Similarity=0.025 Sum_probs=60.9
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CC-----HHHHHHHHHh
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FE-----IGALLELIQR 115 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~-----~~~~~~~i~~ 115 (240)
..+|...+...+..+...+. ..++.++|++..+++.... +...+++++..|+..+...+ .. .+++..++++
T Consensus 68 ~~~Ty~el~~~v~~~A~~L~-~~Gv~~gd~Vai~~~n~~e--~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~ 144 (614)
T PRK08180 68 RRLTYAEALERVRAIAQALL-DRGLSAERPLMILSGNSIE--HALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLEL 144 (614)
T ss_pred eEeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEecCCCHH--HHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhc
Confidence 46788888887776665543 4578999999988876543 33357899999999988754 33 6888899999
Q ss_pred ccceeeeech
Q 039504 116 HRVSVAAVVP 125 (240)
Q Consensus 116 ~~~t~l~~~p 125 (240)
.++..++...
T Consensus 145 ~~~~~li~~~ 154 (614)
T PRK08180 145 LTPGLVFADD 154 (614)
T ss_pred CCCcEEEEcC
Confidence 9988887754
No 226
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=75.04 E-value=27 Score=33.12 Aligned_cols=99 Identities=15% Similarity=0.031 Sum_probs=71.6
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.|++++.+.. .| -.+|..++...+..+...+.. .+.++|++..++|....+- ...++++..|+..+..
T Consensus 628 ~p~~~a~~~~-~~-------~~~Ty~el~~~~~~~a~~L~~--~~~~g~~V~i~~~n~~~~~--~~~la~~~~G~v~v~l 695 (1146)
T PRK08633 628 NWSRLAVADS-TG-------GELSYGKALTGALALARLLKR--ELKDEENVGILLPPSVAGA--LANLALLLAGKVPVNL 695 (1146)
T ss_pred cCCCcEEEcC-CC-------CcCcHHHHHHHHHHHHHHHHH--hCCCCCeEEEECCCchHHH--HHHHHHHHcCCEEEEe
Confidence 4666666532 22 147888887777666654432 3588999998888655433 3578999999988776
Q ss_pred c-CCCHHHHHHHHHhccceeeeechHHHHHHH
Q 039504 102 Q-KFEIGALLELIQRHRVSVAAVVPPLVLALA 132 (240)
Q Consensus 102 ~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~ 132 (240)
. ...++++...+++.+++.+...+.....+.
T Consensus 696 ~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 727 (1146)
T PRK08633 696 NYTASEAALKSAIEQAQIKTVITSRKFLEKLK 727 (1146)
T ss_pred CCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHh
Confidence 5 477899999999999999998887766654
No 227
>PRK06060 acyl-CoA synthetase; Validated
Probab=73.92 E-value=18 Score=32.34 Aligned_cols=82 Identities=22% Similarity=0.191 Sum_probs=60.1
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++......+...+. ..++.++|++..+++-...+ ...+++++..|+..+..++ ....++...+++.++.++
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~-~~g~~~g~~V~i~~~~~~~~--~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~v 106 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLR-NRGLSSGDRVLLCLPDSPDL--VQLLLACLARGVMAFLANPELHRDDHALAARNTEPALV 106 (705)
T ss_pred ceeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEE
Confidence 3788888777766655443 45789999999888755433 2357889999988887654 677888888889998888
Q ss_pred eechHH
Q 039504 122 AVVPPL 127 (240)
Q Consensus 122 ~~~p~~ 127 (240)
+.....
T Consensus 107 i~~~~~ 112 (705)
T PRK06060 107 VTSDAL 112 (705)
T ss_pred EEchHH
Confidence 775543
No 228
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=73.76 E-value=19 Score=30.88 Aligned_cols=83 Identities=17% Similarity=0.093 Sum_probs=60.9
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++......+...+. ..++.++|++..+++.... +...+++++..|...+... .....++...+++.++..+
T Consensus 42 ~~ty~~l~~~~~~~a~~L~-~~g~~~g~~V~i~~~~~~~--~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 118 (542)
T PRK07786 42 TTTWRELDDRVAALAGALS-RRGVGFGDRVLILMLNRTE--FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVV 118 (542)
T ss_pred cccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEE
Confidence 5788888777666554433 3478889999887774433 3335788889998888875 4678899999999999988
Q ss_pred eechHHH
Q 039504 122 AVVPPLV 128 (240)
Q Consensus 122 ~~~p~~~ 128 (240)
+..+...
T Consensus 119 i~~~~~~ 125 (542)
T PRK07786 119 VTEAALA 125 (542)
T ss_pred EEccchH
Confidence 7766544
No 229
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=73.65 E-value=13 Score=32.00 Aligned_cols=83 Identities=17% Similarity=0.086 Sum_probs=61.3
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..+++..... ....++++..|+..+... .+..+++...+++.+++.+
T Consensus 49 ~~ty~eL~~~~~~la~~L~-~~gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~i 125 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQ-KLGVEKGDRVAIMLPNCPQA--VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVI 125 (563)
T ss_pred eecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCChHH--HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEE
Confidence 4788888777766655443 34778899999888765443 335788899998888765 4777889999999999988
Q ss_pred eechHHH
Q 039504 122 AVVPPLV 128 (240)
Q Consensus 122 ~~~p~~~ 128 (240)
.+.....
T Consensus 126 i~~~~~~ 132 (563)
T PRK06710 126 LCLDLVF 132 (563)
T ss_pred EEeccch
Confidence 8876443
No 230
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=73.43 E-value=17 Score=27.37 Aligned_cols=76 Identities=24% Similarity=0.249 Sum_probs=50.1
Q ss_pred CCCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc
Q 039504 22 EPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM 101 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 101 (240)
.|+.++++....+. +.+..+|..++...+..+...+....+++++|++...+|....+- ..+++++..|+.++..
T Consensus 9 ~p~~~al~~~~~~~---~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~--~~~~a~~~~G~v~vp~ 83 (227)
T TIGR03089 9 DPASPRLTFYDDAT---GERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTA--VWLLAAWSTGVEVVLA 83 (227)
T ss_pred CCCCcEEEEEcCCC---CeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH--HHHHHHHHcCCEEEeC
Confidence 45667766432221 112458888888877766655431258999999999998654433 3578889999888776
Q ss_pred c
Q 039504 102 Q 102 (240)
Q Consensus 102 ~ 102 (240)
.
T Consensus 84 n 84 (227)
T TIGR03089 84 G 84 (227)
T ss_pred C
Confidence 3
No 231
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=72.95 E-value=17 Score=30.03 Aligned_cols=62 Identities=13% Similarity=0.055 Sum_probs=48.0
Q ss_pred CccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeechH
Q 039504 63 NLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVPP 126 (240)
Q Consensus 63 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~ 126 (240)
..++.++|++..+++.... +...+++++..|+..+..+ ....+.+...+++.++..+...+.
T Consensus 18 ~~g~~~gd~v~i~~~~~~~--~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 18 AQGIRSGSRVALVGQNSIE--MVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred HhCCCCCCEEEEEcCCCHH--HHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 3478899999988876543 3346789999999888875 477888899999999988876554
No 232
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=72.04 E-value=15 Score=30.95 Aligned_cols=80 Identities=13% Similarity=0.081 Sum_probs=58.8
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.+++++..+.+.... +...+++++..|+..+.... ...+.+...++..++..+
T Consensus 27 ~~t~~~l~~~~~~~a~~l~-~~g~~~~~~v~~~~~~~~~--~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFID-SLKLPDKSPIIVFGHMSPE--MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLI 103 (503)
T ss_pred EEeHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEE
Confidence 4788888887766655444 3467889999888775433 33467899999998887764 666788888888888888
Q ss_pred eech
Q 039504 122 AVVP 125 (240)
Q Consensus 122 ~~~p 125 (240)
++..
T Consensus 104 ~~~~ 107 (503)
T PRK04813 104 IATE 107 (503)
T ss_pred Eecc
Confidence 7654
No 233
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=70.94 E-value=21 Score=29.83 Aligned_cols=80 Identities=24% Similarity=0.170 Sum_probs=59.0
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..+.+.... +...+++++..|...+... ....+++...+++.++..+
T Consensus 28 ~~ty~el~~~~~~~a~~L~-~~g~~~~~~v~l~~~~~~~--~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 104 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFA-QQGVVEGSGVALRGKNSPE--TLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFA 104 (458)
T ss_pred ceeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEecCCCHH--HHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEE
Confidence 4788888887776665443 3478899999888765443 2235788999999998875 4677888888999888887
Q ss_pred eech
Q 039504 122 AVVP 125 (240)
Q Consensus 122 ~~~p 125 (240)
....
T Consensus 105 i~~~ 108 (458)
T PRK09029 105 LVLE 108 (458)
T ss_pred EEcC
Confidence 7644
No 234
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=70.56 E-value=20 Score=30.75 Aligned_cols=80 Identities=14% Similarity=-0.022 Sum_probs=59.4
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++..+++.... +...+++++..|+..+...+ ....++...+++.+++.+
T Consensus 46 ~~ty~el~~~~~~~a~~L~-~~gi~~g~~V~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~v 122 (541)
T TIGR03205 46 PITYTELEAMAETAAAALL-RAGYGKDASVALYLGNTPD--HPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLL 122 (541)
T ss_pred EeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCChH--HHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEE
Confidence 4788888777666555443 4578999999988875433 22357788889999887754 678899999999999988
Q ss_pred eech
Q 039504 122 AVVP 125 (240)
Q Consensus 122 ~~~p 125 (240)
+...
T Consensus 123 i~~~ 126 (541)
T TIGR03205 123 ITSD 126 (541)
T ss_pred EEeC
Confidence 7653
No 235
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=70.20 E-value=19 Score=30.37 Aligned_cols=81 Identities=10% Similarity=0.040 Sum_probs=59.4
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.++|++....+....+. ..+++++..|+..+..+. ...+.+...+++.++..+
T Consensus 25 ~~ty~el~~~~~~~a~~L~-~~g~~~~~~V~i~~~~~~~~~--~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~i 101 (502)
T TIGR01734 25 ELTYQQLKEQSDRLAAFIQ-KRILPKKSPIIVYGHMEPHML--VAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELV 101 (502)
T ss_pred EEeHHHHHHHHHHHHHHHH-HhCCCCCCeEEEEeCCCHHHH--HHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEE
Confidence 5888888887776655443 346788888887777554332 357899999998887654 667788899999998888
Q ss_pred eechH
Q 039504 122 AVVPP 126 (240)
Q Consensus 122 ~~~p~ 126 (240)
+....
T Consensus 102 i~~~~ 106 (502)
T TIGR01734 102 IHTAE 106 (502)
T ss_pred Eeccc
Confidence 87654
No 236
>PRK09192 acyl-CoA synthetase; Validated
Probab=69.08 E-value=33 Score=29.72 Aligned_cols=87 Identities=14% Similarity=0.051 Sum_probs=62.6
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CC-------HHHHHHHH
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FE-------IGALLELI 113 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~-------~~~~~~~i 113 (240)
-.+|..++......+...+. ..++.++|++..+++.... +...+++++..|+..+..+. ++ .+++...+
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~-~~gi~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i 124 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLL-ALGLKPGDRVALIAETDGD--FVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGML 124 (579)
T ss_pred EEecHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEcCCchh--HHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHH
Confidence 56788888777666655444 3578999999988886433 33357889999988888742 21 57889999
Q ss_pred HhccceeeeechHHHHHH
Q 039504 114 QRHRVSVAAVVPPLVLAL 131 (240)
Q Consensus 114 ~~~~~t~l~~~p~~~~~l 131 (240)
++.++..++........+
T Consensus 125 ~~~~~~~il~~~~~~~~~ 142 (579)
T PRK09192 125 ASAQPAAIITPDELLPWV 142 (579)
T ss_pred HhcCCCEEEeChHHHHHH
Confidence 999999888876654433
No 237
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=68.18 E-value=21 Score=30.48 Aligned_cols=80 Identities=16% Similarity=0.191 Sum_probs=59.2
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.+++++..+++... .+...+++++..|+..+... ....+++...+++.++..+
T Consensus 48 ~~Ty~el~~~~~~~a~~L~-~~g~~~g~~V~i~~~~~~--~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~l 124 (527)
T TIGR02275 48 QWSYRELDQRADNLAAGLT-KLGIGQGDTAVVQLPNIA--EFYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALY 124 (527)
T ss_pred eecHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCcH--HHHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEE
Confidence 5788888887766665443 457889999998876543 33345788899998877654 4677889999999898887
Q ss_pred eech
Q 039504 122 AVVP 125 (240)
Q Consensus 122 ~~~p 125 (240)
....
T Consensus 125 i~~~ 128 (527)
T TIGR02275 125 IIDR 128 (527)
T ss_pred EEcC
Confidence 7654
No 238
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=67.15 E-value=49 Score=29.19 Aligned_cols=97 Identities=20% Similarity=0.167 Sum_probs=66.6
Q ss_pred CCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc-
Q 039504 23 PDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM- 101 (240)
Q Consensus 23 ~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~- 101 (240)
.+.++++.---++.+.+. ++...++.....+...+. .+++.++|++...+|+.-..- ...+++...|+.....
T Consensus 79 ~~~~a~~~~~~~~~~~~~---~t~~el~~~v~~~a~~l~-~~g~~kGD~V~~~mPm~~e~~--ia~lA~~r~Gai~~~v~ 152 (626)
T KOG1175|consen 79 GDKVAIIFEGNEGGDTEV---WTYKELLDQVVRLANVLR-KCGLKKGDTVAIYMPMIPEAV--IAMLACARIGAIHSSVF 152 (626)
T ss_pred CCCcEEEEEecCCCceEE---EEHHHHHHHHHHHHHHHH-hcCCCCCcEEEEeccCChHHH--HHHHHHhhcCeEEEEee
Confidence 344555554444444433 677777777766655554 678999999999999754422 2456666777655554
Q ss_pred cCCCHHHHHHHHHhccceeeeech
Q 039504 102 QKFEIGALLELIQRHRVSVAAVVP 125 (240)
Q Consensus 102 ~~~~~~~~~~~i~~~~~t~l~~~p 125 (240)
..+.++++..-++.-++..++..-
T Consensus 153 ~~fs~~~l~~Rl~~~~~k~i~t~d 176 (626)
T KOG1175|consen 153 AGFSAKELLDRLQDSKAKVIITQD 176 (626)
T ss_pred ccCCHHHHHHHHHhcCCCEEEEEe
Confidence 579999999999999988877643
No 239
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=65.80 E-value=28 Score=29.20 Aligned_cols=81 Identities=10% Similarity=0.019 Sum_probs=55.6
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccc-cCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccce
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYL-TNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVS 119 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~-~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t 119 (240)
+.+..+++...+......+. ..+. ..++++....+... .+...+++++..|+.++... .....++...+++.++.
T Consensus 18 ~~~~~~el~~~~~~~a~~L~-~~g~~~~~~~V~i~~~n~~--e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~ 94 (452)
T PRK07445 18 IGYNSQRFYQLAQQLYLQLQ-QLATPRTPPKILLAESDPL--QFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPD 94 (452)
T ss_pred eecChHHHHHHHHHHHHHHH-HhcCCCCCCeEEEecCCCH--HHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCC
Confidence 44666777776655554333 2344 56888877776432 23335788899999998875 47788999999999998
Q ss_pred eeeech
Q 039504 120 VAAVVP 125 (240)
Q Consensus 120 ~l~~~p 125 (240)
++....
T Consensus 95 ~~i~~~ 100 (452)
T PRK07445 95 QIWGLD 100 (452)
T ss_pred EEEecC
Confidence 887643
No 240
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=65.52 E-value=25 Score=31.47 Aligned_cols=83 Identities=11% Similarity=0.013 Sum_probs=61.6
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+... ..++|++..+++.... +...+++++..|+..+... ...++++...+++.+++.+
T Consensus 231 ~~Ty~el~~~~~~lA~~L~~~--~~~gd~Val~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~v 306 (718)
T PRK08043 231 PDSYRKLLKKTLFVGRILEKY--SVEGERIGLMLPNATI--SAAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTI 306 (718)
T ss_pred cccHHHHHHHHHHHHHHHHHh--cCCCceEEEEcCCcHH--HHHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEE
Confidence 478888888777666655432 4889999998886543 3335788888898777664 4678899999999999998
Q ss_pred eechHHHH
Q 039504 122 AVVPPLVL 129 (240)
Q Consensus 122 ~~~p~~~~ 129 (240)
++....+.
T Consensus 307 i~~~~~~~ 314 (718)
T PRK08043 307 FTSRQFLD 314 (718)
T ss_pred EEcHHHHh
Confidence 88766543
No 241
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=64.93 E-value=6.1 Score=21.28 Aligned_cols=22 Identities=23% Similarity=0.341 Sum_probs=20.0
Q ss_pred hhhhccCCCCCHHHHHHHHHhC
Q 039504 146 RVVLSGAAPLGKELEDALRSRV 167 (240)
Q Consensus 146 r~v~~~G~~~~~~~~~~~~~~~ 167 (240)
+.+-++|.|++.+..+.++..|
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~ 43 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIF 43 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHH
Confidence 6788999999999999999887
No 242
>PRK07868 acyl-CoA synthetase; Validated
Probab=63.91 E-value=38 Score=31.86 Aligned_cols=84 Identities=19% Similarity=0.098 Sum_probs=62.3
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccCCCHHHHHHHHHhccceeee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSVAA 122 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~ 122 (240)
.+|..++...+..+...+. ..++.++|++..+++.... +...+++++..|+..+...+. .++..+++..+++.++
T Consensus 472 ~lTY~eL~~ra~rlA~~L~-~~Gv~~Gd~VaI~~~n~~e--~v~a~lA~~~aGav~vpl~p~--~~l~~il~~s~~~~li 546 (994)
T PRK07868 472 VHTYEAVNRRINNVVRGLI-AVGVRQGDRVGVLMETRPS--ALVAIAALSRLGAVAVLMPPD--TDLAAAVRLGGVTEII 546 (994)
T ss_pred eeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCHH--HHHHHHHHHhcCCEEEEeCCc--hhHHHHHhccCCeEEE
Confidence 4788888888777666544 4588999999988875443 333578999999999888653 4677788888999888
Q ss_pred echHHHHHH
Q 039504 123 VVPPLVLAL 131 (240)
Q Consensus 123 ~~p~~~~~l 131 (240)
+.+..+..+
T Consensus 547 ~~~~~~~~~ 555 (994)
T PRK07868 547 TDPTNLEAA 555 (994)
T ss_pred EChHHHHHH
Confidence 877665544
No 243
>PRK07787 acyl-CoA synthetase; Validated
Probab=61.71 E-value=59 Score=27.27 Aligned_cols=75 Identities=11% Similarity=0.054 Sum_probs=56.2
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|...+...+..+...+ .++|++..+.+-. ..+...+++++..|...+..+. ...+++...+++.+++.+
T Consensus 25 ~~Ty~el~~~~~~~a~~L------~~~~~V~l~~~~~--~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 96 (471)
T PRK07787 25 VLSRSDLAGAATAVAERV------AGARRVAVLATPT--LATVLAVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAW 96 (471)
T ss_pred EEEHHHHHHHHHHHHHHh------ccCCEEEEECCCC--HHHHHHHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEE
Confidence 478888888877776632 3568877776644 2344467899999999888754 778899999999999988
Q ss_pred eech
Q 039504 122 AVVP 125 (240)
Q Consensus 122 ~~~p 125 (240)
...+
T Consensus 97 l~~~ 100 (471)
T PRK07787 97 LGPA 100 (471)
T ss_pred EecC
Confidence 8765
No 244
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=59.09 E-value=9 Score=27.41 Aligned_cols=71 Identities=17% Similarity=0.144 Sum_probs=32.2
Q ss_pred eEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCC-CHHHHHHHHHhCCCCccc
Q 039504 97 GVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPL-GKELEDALRSRVPQAILG 173 (240)
Q Consensus 97 ~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~-~~~~~~~~~~~~~~~~i~ 173 (240)
.++++++.......+.+ ..++..-+..+.++..+.+.+... ..+.+++||.+- -.+..+.+++.+|+.+|.
T Consensus 7 dlv~~DG~~i~~~~~~~-g~~~~~rv~g~dl~~~l~~~~~~~-----~~~ifllG~~~~~~~~~~~~l~~~yP~l~iv 78 (172)
T PF03808_consen 7 DLVLPDGMPIVWAARLL-GRPLPERVTGSDLFPDLLRRAEQR-----GKRIFLLGGSEEVLEKAAANLRRRYPGLRIV 78 (172)
T ss_pred CEEecCCHHHHHHHHHc-CCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEeCCHHHHHHHHHHHHHHCCCeEEE
Confidence 33444333333333333 233323344445555555543322 235555555432 245555666666665554
No 245
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=59.00 E-value=35 Score=32.96 Aligned_cols=86 Identities=17% Similarity=0.175 Sum_probs=62.7
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|...+......+...+. ..++.++|++..+++-... +...+++++..|+..+..+. ...+++..++++.++..+
T Consensus 483 ~~Ty~eL~~~~~~la~~L~-~~g~~~g~~V~l~~~~~~~--~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~ 559 (1296)
T PRK10252 483 QFSYREMREQVVALANLLR-ERGVKPGDSVAVALPRSVF--LTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLL 559 (1296)
T ss_pred cEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEE
Confidence 4788888777665554433 3478899999988875543 33357899999999988865 555788888999999998
Q ss_pred eechHHHHHH
Q 039504 122 AVVPPLVLAL 131 (240)
Q Consensus 122 ~~~p~~~~~l 131 (240)
.........+
T Consensus 560 i~~~~~~~~~ 569 (1296)
T PRK10252 560 ITTADQLPRF 569 (1296)
T ss_pred EECcchhhhc
Confidence 8876654443
No 246
>PRK06145 acyl-CoA synthetase; Validated
Probab=58.99 E-value=46 Score=28.02 Aligned_cols=82 Identities=11% Similarity=0.090 Sum_probs=58.3
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.+++++..+.+-... +...+++++..|+..+... ....+.+...+++.++..+
T Consensus 27 ~~ty~el~~~v~~~a~~L~-~~g~~~~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~ 103 (497)
T PRK06145 27 EISYAEFHQRILQAAGMLH-ARGIGQGDVVALLMKNSAA--FLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLL 103 (497)
T ss_pred ceeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEE
Confidence 4778888777766555433 3467889998888765433 3335778899998888765 4678888889998888887
Q ss_pred eechHH
Q 039504 122 AVVPPL 127 (240)
Q Consensus 122 ~~~p~~ 127 (240)
......
T Consensus 104 i~~~~~ 109 (497)
T PRK06145 104 LVDEEF 109 (497)
T ss_pred EEccch
Confidence 765433
No 247
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=57.82 E-value=63 Score=22.66 Aligned_cols=75 Identities=27% Similarity=0.224 Sum_probs=50.1
Q ss_pred hhcCceEEEccCCCHHHH---HHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCC
Q 039504 92 LRAGAGVLLMQKFEIGAL---LELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVP 168 (240)
Q Consensus 92 l~~G~~~v~~~~~~~~~~---~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~ 168 (240)
...|+.+.+..+||++.+ .+++++++.....+.+.-+.............+. ++.+ .+..+++.+.+++.
T Consensus 63 ~~~g~~l~y~GDfDp~Gl~IA~~l~~r~~~~~Wrm~~~dY~~~~~~~~~~~~~l~-l~~v----~p~~~~L~~~m~~~-- 135 (152)
T PF09664_consen 63 AAAGARLYYSGDFDPEGLRIANRLIQRYGARPWRMDAEDYLAALSAEPLSGRRLK-LPNV----APWLPELAEAMRER-- 135 (152)
T ss_pred HhCCCEEEEecCCCHHHHHHHHHHHHHhCCccccCCHHHHHHhccccCCCCCcCC-cccC----ChhcHHHHHHHHHh--
Confidence 467888888889999654 4455678888778888877665554443333333 3322 67888999998886
Q ss_pred CCccc
Q 039504 169 QAILG 173 (240)
Q Consensus 169 ~~~i~ 173 (240)
+..++
T Consensus 136 ~~a~~ 140 (152)
T PF09664_consen 136 GRAVY 140 (152)
T ss_pred Cceee
Confidence 55443
No 248
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=57.34 E-value=43 Score=23.65 Aligned_cols=82 Identities=22% Similarity=0.292 Sum_probs=55.5
Q ss_pred HhhcCceEEEccCCCHHHHHHHHHhc-cceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCC-------CCHHHHHH
Q 039504 91 SLRAGAGVLLMQKFEIGALLELIQRH-RVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAP-------LGKELEDA 162 (240)
Q Consensus 91 ~l~~G~~~v~~~~~~~~~~~~~i~~~-~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~-------~~~~~~~~ 162 (240)
.+-.|.++++-.+.....+.+.|.+. +++++--....+..|.+.. ..+.++.||+- ..+...+.
T Consensus 16 ~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~~--------~~~vi~~GG~~~~~~~~~~G~~a~~~ 87 (161)
T PF00455_consen 16 LIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSENP--------NIEVILLGGEVNPKSLSFVGPIALEA 87 (161)
T ss_pred hCCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhcC--------ceEEEEeCCEEEcCCCcEECchHHHH
Confidence 34456666666677788888888887 7888888888888887653 56788888832 23455566
Q ss_pred HHHhCCCCcccccccccc
Q 039504 163 LRSRVPQAILGQGYGMTE 180 (240)
Q Consensus 163 ~~~~~~~~~i~~~yG~tE 180 (240)
+++...+..++..-|..+
T Consensus 88 l~~~~~d~afi~~~gi~~ 105 (161)
T PF00455_consen 88 LRQFRFDKAFIGADGISE 105 (161)
T ss_pred HHhhccceEEecccEecC
Confidence 666544555666666665
No 249
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=57.30 E-value=86 Score=27.74 Aligned_cols=93 Identities=18% Similarity=0.061 Sum_probs=67.0
Q ss_pred CceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhcc
Q 039504 39 PKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHR 117 (240)
Q Consensus 39 pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~ 117 (240)
......|..++...+..+..++. .+++..+|++..+....+ .|...-++++..|+..+... ...++.+..++++..
T Consensus 41 ~~~~~~ty~e~~~~v~~~a~gL~-~lg~~~gdrvai~a~nr~--eW~i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se 117 (613)
T COG1022 41 GGWEAITYRELYERVRALASGLL-SLGIPAGDRVAIFAANRP--EWAIADLAILALGAVSVPIYSTSTPEQLAYILNESE 117 (613)
T ss_pred CcceEeeHHHHHHHHHHHHHHHH-hcCCCCCCEEEEEeCCCH--HHHHHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCC
Confidence 34567888888888877765544 456666898776654333 33345678889998888875 478899999999999
Q ss_pred ceeeeechHHHHHHHhC
Q 039504 118 VSVAAVVPPLVLALAKN 134 (240)
Q Consensus 118 ~t~l~~~p~~~~~l~~~ 134 (240)
+.+++........+...
T Consensus 118 ~~~i~~e~~~~~~~~~~ 134 (613)
T COG1022 118 SKVIFVENQELLDLVLP 134 (613)
T ss_pred ceEEEecchHHHHHHHh
Confidence 99999877655555443
No 250
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=56.18 E-value=74 Score=27.71 Aligned_cols=95 Identities=8% Similarity=0.022 Sum_probs=66.0
Q ss_pred CccccCCcE-EEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCC
Q 039504 63 NLYLTNGDV-VLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADY 140 (240)
Q Consensus 63 ~~~~~~~d~-~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 140 (240)
.++..+++. +..+.+..+ -|+....+++..+.++|..- ...-+.+...+.+.+++.+++.+.++..|..-..
T Consensus 108 ~lG~k~~e~k~~iFa~Tra--eWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~---- 181 (678)
T KOG1180|consen 108 KLGLKPKETKIAIFAETRA--EWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLK---- 181 (678)
T ss_pred HhCCCCCCCeEEEEecchH--HHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHh----
Confidence 456675555 555555433 23345678999999998863 4566789999999999999999999997765432
Q ss_pred CccchhhhhccCC---CCCHHHHHHH
Q 039504 141 DLSSIRVVLSGAA---PLGKELEDAL 163 (240)
Q Consensus 141 ~~~~lr~v~~~G~---~~~~~~~~~~ 163 (240)
..+++|.|++-.+ ....+....+
T Consensus 182 ~~~~vk~II~~d~id~~~~~~~v~~i 207 (678)
T KOG1180|consen 182 QAKTVKHIIYFDPIDYDAAKDDVNSI 207 (678)
T ss_pred ccCceeEEEEecCCCCccchhhhhhh
Confidence 3457888877663 3444555555
No 251
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=55.94 E-value=67 Score=25.45 Aligned_cols=98 Identities=14% Similarity=0.060 Sum_probs=57.2
Q ss_pred CccccCCcEEEEecchHHhhhhHHHHHHHhhcCc-eE-EEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCC
Q 039504 63 NLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGA-GV-LLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADY 140 (240)
Q Consensus 63 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~-~~-v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 140 (240)
+..+++||.++.....+.+ |.. .+-.|-..|. ++ ++-++.+.+++.+.++.++++.++.-..+...=.... ..
T Consensus 155 fv~L~~GD~vIQNganS~V-G~~-ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~---~~ 229 (354)
T KOG0025|consen 155 FVQLNKGDSVIQNGANSGV-GQA-VIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKF---KG 229 (354)
T ss_pred HHhcCCCCeeeecCcccHH-HHH-HHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhh---hc
Confidence 5567889988876654444 333 2223333443 33 3445789999999999999998776444332111110 11
Q ss_pred Cccchhh-hhccCCCCCHHHHHHHHH
Q 039504 141 DLSSIRV-VLSGAAPLGKELEDALRS 165 (240)
Q Consensus 141 ~~~~lr~-v~~~G~~~~~~~~~~~~~ 165 (240)
+++..|+ +-|-|+..+.++.+.+.+
T Consensus 230 ~~~~prLalNcVGGksa~~iar~L~~ 255 (354)
T KOG0025|consen 230 DNPRPRLALNCVGGKSATEIARYLER 255 (354)
T ss_pred cCCCceEEEeccCchhHHHHHHHHhc
Confidence 3344554 334455667777777766
No 252
>PF05748 Rubella_E1: Rubella membrane glycoprotein E1; InterPro: IPR008820 Rubella virus (RV), the sole member of the genus Rubivirus within the family Togaviridae, is a small enveloped, positive strand RNA virus. The nucleocapsid consists of 40S genomic RNA and a single species of capsid protein which is enveloped within a host-derived lipid bilayer containing two viral glycoproteins, E1 (58 kDa) and E2 (42-46 kDa). In virus infected cells, RV matures by budding either at the plasma membrane, or at the internal membranes depending on the cell type and enters adjacent uninfected cells by a membrane fusion process in the endosome, directed by E1-E2 heterodimers. The heterodimer formation is crucial for E1 transport out of the endoplasmic reticulum to the Golgi and plasma membrane. In RV E1, a cysteine at position 82 is crucial for the E1-E2 heterodimer formation and cell surface expression of the two proteins. E1 has been shown to be a type 1 membrane protein, rich in cysteine residues with extensive intramolecular disulphide bonds []. This family is found together with IPR008819 from INTERPRO and IPR008821 from INTERPRO.; GO: 0016021 integral to membrane, 0019013 viral nucleocapsid
Probab=55.74 E-value=52 Score=25.28 Aligned_cols=79 Identities=16% Similarity=0.188 Sum_probs=42.7
Q ss_pred CCCHHHHHHHHHhCCCCcccccccccccccchhhccCCCCCCCCCCCCccccccCCceEEEeeCCCCCCCC-CCCCceEE
Q 039504 154 PLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLP-HNQPGEIC 232 (240)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~-~g~~Gel~ 232 (240)
|-+.++.+.+.+..++.+-.-..|+....+.-...+..... ..+...-+|-....-+++++|.| +-.+. .-.+||+|
T Consensus 213 pdpgdlveyimnytgnqqsrwglgspnchgpdwaspvcqrh-spdcsrlvgatperprlrlvdad-dpllrtapgpgevw 290 (496)
T PF05748_consen 213 PDPGDLVEYIMNYTGNQQSRWGLGSPNCHGPDWASPVCQRH-SPDCSRLVGATPERPRLRLVDAD-DPLLRTAPGPGEVW 290 (496)
T ss_pred CCchHHHHHHHhccCcccccccCCCCCCCCCCccchhhhcc-CCchhhhhcCCCCCCceeeecCC-CcceecCCCCCcee
Confidence 44568889998887555454455555433221111111111 12223345655566788999954 33332 33579999
Q ss_pred Ee
Q 039504 233 IR 234 (240)
Q Consensus 233 v~ 234 (240)
|+
T Consensus 291 vt 292 (496)
T PF05748_consen 291 VT 292 (496)
T ss_pred Ee
Confidence 87
No 253
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=55.00 E-value=63 Score=26.94 Aligned_cols=102 Identities=19% Similarity=0.219 Sum_probs=60.2
Q ss_pred eehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc-cCCCHHHHHHHHHhccceee-
Q 039504 44 LTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM-QKFEIGALLELIQRHRVSVA- 121 (240)
Q Consensus 44 ~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l- 121 (240)
+|..++...+..+..++. .+++.++|+++..+|..-- +...+++.+..|..-|+. +.-...++-.+...-.++.+
T Consensus 54 ~sY~eLdqr~d~LAa~l~-~lGi~~Gd~vlvQLpN~~e--f~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i 130 (542)
T COG1021 54 LSYAELDQRADRLAAGLR-RLGIKPGDTVLVQLPNVAE--FYITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLI 130 (542)
T ss_pred ccHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCchHH--HHHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchhee
Confidence 778888777776666554 6799999999999986543 433567777777665553 22222223223332233222
Q ss_pred -------eechHHHHHHHhCCCCCCCCccchhhhhccCCCC
Q 039504 122 -------AVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPL 155 (240)
Q Consensus 122 -------~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~ 155 (240)
+..-.+.+.+.. +.+++|.+++.|+.-
T Consensus 131 ~~~~~~gFd~~~~ar~~~a-------~~~tlr~v~v~ge~~ 164 (542)
T COG1021 131 VARQHSGFDYRPFARELVA-------KHPTLRHVIVAGEAE 164 (542)
T ss_pred echhhcccCcHHHHHHHHh-------hCCcceEEEEccCCC
Confidence 223344444433 235788888888764
No 254
>PRK08308 acyl-CoA synthetase; Validated
Probab=54.86 E-value=71 Score=26.25 Aligned_cols=79 Identities=11% Similarity=0.062 Sum_probs=53.6
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++......+...+ ..+..+++++..+.+-.. .+...+++++..|+..+..+. ...+.+...+++.++..+
T Consensus 8 ~~ty~el~~~~~~~a~~l--~~~~~~g~~V~i~~~~~~--~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~ 83 (414)
T PRK08308 8 EYSKSDFDLRLQRYEEME--QFQEAAGNRFAVCLKDPF--DIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGL 83 (414)
T ss_pred eecHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCh--HHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEE
Confidence 467777766655444332 235788999988776443 333357788888999888764 556777888888888877
Q ss_pred eech
Q 039504 122 AVVP 125 (240)
Q Consensus 122 ~~~p 125 (240)
....
T Consensus 84 i~~~ 87 (414)
T PRK08308 84 LYGE 87 (414)
T ss_pred EecC
Confidence 7543
No 255
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=52.67 E-value=80 Score=30.16 Aligned_cols=82 Identities=16% Similarity=0.111 Sum_probs=60.7
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++......+...+. .+..++|++..+++..... ....++++..|+..+... ...++++...+++.+++.+
T Consensus 658 ~~Ty~el~~~~~~lA~~L~--~g~~~gd~V~i~~~n~~~~--~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~v 733 (1140)
T PRK06814 658 PLTYRKLLTGAFVLGRKLK--KNTPPGENVGVMLPNANGA--AVTFFALQSAGRVPAMINFSAGIANILSACKAAQVKTV 733 (1140)
T ss_pred ccCHHHHHHHHHHHHHHHH--hcCCCCCeEEEEcCCchHH--HHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEE
Confidence 4788888777766555443 2678999999888765433 335788888898777664 4778999999999999998
Q ss_pred eechHHH
Q 039504 122 AVVPPLV 128 (240)
Q Consensus 122 ~~~p~~~ 128 (240)
+......
T Consensus 734 i~~~~~~ 740 (1140)
T PRK06814 734 LTSRAFI 740 (1140)
T ss_pred EecHHHH
Confidence 8876544
No 256
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=51.34 E-value=68 Score=24.15 Aligned_cols=83 Identities=14% Similarity=0.187 Sum_probs=50.0
Q ss_pred HHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeechHHH------HHHHhCCCCCCCCccchhhhhcc
Q 039504 79 FHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVPPLV------LALAKNPMVADYDLSSIRVVLSG 151 (240)
Q Consensus 79 ~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~------~~l~~~~~~~~~~~~~lr~v~~~ 151 (240)
.|..|........-..|..++-.. ...++.+.+..+++|+..+..+..+- +.+.+..+..+ ++.--.+..|
T Consensus 116 vHdIGk~iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeG--iRd~v~v~vG 193 (227)
T COG5012 116 VHDIGKNIVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEG--IRDKVIVMVG 193 (227)
T ss_pred HHHHHHHHHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcC--CccCeEEeec
Confidence 677777632223335566666654 47789999999999999888765432 22222222222 1112235568
Q ss_pred CCCCCHHHHHHH
Q 039504 152 AAPLGKELEDAL 163 (240)
Q Consensus 152 G~~~~~~~~~~~ 163 (240)
|.|++.+..+++
T Consensus 194 GApvtq~~a~~i 205 (227)
T COG5012 194 GAPVTQDWADKI 205 (227)
T ss_pred CccccHHHHHHh
Confidence 888987766655
No 257
>PRK10411 DNA-binding transcriptional activator FucR; Provisional
Probab=50.74 E-value=52 Score=25.07 Aligned_cols=81 Identities=17% Similarity=0.170 Sum_probs=53.5
Q ss_pred hcCceEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCC-------CCHHHHHHHHH
Q 039504 93 RAGAGVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAP-------LGKELEDALRS 165 (240)
Q Consensus 93 ~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~-------~~~~~~~~~~~ 165 (240)
--|.++++..+.....+.+.+.+.+.|++...+..+..|... +.++.+++||+- ..+...+.+++
T Consensus 92 ~~gd~Ifld~GtT~~~l~~~L~~~~ltVvTNs~~ia~~l~~~--------~~~~vil~GG~~~~~~~~~~G~~a~~~l~~ 163 (240)
T PRK10411 92 EEGMVIALDASSTCWYLARQLPDINIQVFTNSHPICQELGKR--------ERIQLISSGGTLERKYGCYVNPSLISQLKS 163 (240)
T ss_pred CCCCEEEEcCcHHHHHHHHhhCCCCeEEEeCCHHHHHHHhcC--------CCCEEEEECCEEeCCCCceECHHHHHHHHh
Confidence 446666666666777788888766788777777778777554 245678888842 34556666666
Q ss_pred hCCCCccccccccccc
Q 039504 166 RVPQAILGQGYGMTEA 181 (240)
Q Consensus 166 ~~~~~~i~~~yG~tE~ 181 (240)
...+..++..-|.++.
T Consensus 164 ~~~d~afis~~gi~~~ 179 (240)
T PRK10411 164 LEIDLFIFSCEGIDSS 179 (240)
T ss_pred cCCCEEEEeceeECCC
Confidence 5446667777776643
No 258
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=49.28 E-value=1.5e+02 Score=25.35 Aligned_cols=98 Identities=15% Similarity=-0.053 Sum_probs=60.8
Q ss_pred CCCcEEEecCCCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc
Q 039504 23 PDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ 102 (240)
Q Consensus 23 ~~~~~~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 102 (240)
|+.++++...++. ...+|..++...+..+...+... .++|++...++.... +...+++++..|+.+++.+
T Consensus 16 ~~~~a~~~~~~~~-----~~~~ty~el~~~~~~lA~~L~~~---~~g~~V~l~~~~~~e--~~~~~la~~~~G~~~~~~~ 85 (525)
T PRK05851 16 GRDLVVLDRESGL-----WRRHPWPEVHGRAENVAARLLDR---DRPGAVGLVGEPTVE--LVAAIQGAWLAGAAVSILP 85 (525)
T ss_pred CCceEEeCCCCCc-----ceeecHHHHHHHHHHHHHHHHhc---CCCCeEEEEcCCCHH--HHHHHHHHHHcCCCCcCCC
Confidence 4555555443332 24678888888887776654322 688999888875443 3335778888998755433
Q ss_pred CC----CH----HHHHHHHHhccceeeeechHHHHH
Q 039504 103 KF----EI----GALLELIQRHRVSVAAVVPPLVLA 130 (240)
Q Consensus 103 ~~----~~----~~~~~~i~~~~~t~l~~~p~~~~~ 130 (240)
.. ++ +.....+++.++..++.....+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 121 (525)
T PRK05851 86 GPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLER 121 (525)
T ss_pred CCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHH
Confidence 21 11 344556777888888877655443
No 259
>PRK07638 acyl-CoA synthetase; Validated
Probab=48.18 E-value=83 Score=26.48 Aligned_cols=79 Identities=15% Similarity=0.105 Sum_probs=56.4
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l 121 (240)
.+|...+...+..+...+... + ..++++..+++... .+...+++++..|+..+..+. ..++++.+.+++.+++.+
T Consensus 26 ~~Ty~~l~~~~~~~a~~L~~~-~-~~~~~v~i~~~~~~--~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~v 101 (487)
T PRK07638 26 VLTYKDWFESVCKVANWLNEK-E-SKNKTIAILLENRI--EFLQLFAGAAMAGWTCVPLDIKWKQDELKERLAISNADMI 101 (487)
T ss_pred EeeHHHHHHHHHHHHHHHHHh-C-CCCCEEEEEcCCCH--HHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhCCCCEE
Confidence 578888877766665543322 3 36788777776533 333467889999999998764 678899999999998888
Q ss_pred eech
Q 039504 122 AVVP 125 (240)
Q Consensus 122 ~~~p 125 (240)
+...
T Consensus 102 i~~~ 105 (487)
T PRK07638 102 VTER 105 (487)
T ss_pred EEec
Confidence 7765
No 260
>TIGR02082 metH 5-methyltetrahydrofolate--homocysteine methyltransferase. S-methyltransferase (MetE, EC 2.1.1.14, the cobalamin-independent methionine synthase) and betaine-homocysteine methyltransferase.
Probab=44.11 E-value=1.9e+02 Score=28.01 Aligned_cols=91 Identities=21% Similarity=0.201 Sum_probs=58.1
Q ss_pred CCcEEEEecc-hHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeechHH------HHHHHhCCCCCC
Q 039504 68 NGDVVLCVLP-LFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVPPL------VLALAKNPMVAD 139 (240)
Q Consensus 68 ~~d~~l~~~p-~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~------~~~l~~~~~~~~ 139 (240)
.+.+++.+.+ =.|..|....-...-..|..++... ...++++++.++++++.++..+-.+ ++.+++..++.+
T Consensus 732 ~gkVvlaTV~GDvHDIGKnIV~~~L~~~GfeVIdLG~dVp~e~iv~aa~e~~~diVgLS~Lmt~t~~~m~~vi~~L~~~g 811 (1178)
T TIGR02082 732 KGKIVLATVKGDVHDIGKNIVGVVLSCNGYEVVDLGVMVPIEKILEAAKDHNADVIGLSGLITPSLDEMKEVAEEMNRRG 811 (1178)
T ss_pred CCeEEEEecCCCccHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHhCCCEEEEcCcccccHHHHHHHHHHHHhcC
Confidence 4556665555 3677788755555567788888876 4788999999999999987664321 222233322222
Q ss_pred CCccchhhhhccCCCCCHHHHHH
Q 039504 140 YDLSSIRVVLSGAAPLGKELEDA 162 (240)
Q Consensus 140 ~~~~~lr~v~~~G~~~~~~~~~~ 162 (240)
. .+ .|++||.+++.+..+.
T Consensus 812 ~---~v-~v~vGGa~~s~~~~~~ 830 (1178)
T TIGR02082 812 I---TI-PLLIGGAATSKTHTAV 830 (1178)
T ss_pred C---Cc-eEEEeccccchhHHHh
Confidence 2 12 3678888888766553
No 261
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=43.41 E-value=2.5e+02 Score=25.33 Aligned_cols=123 Identities=15% Similarity=0.084 Sum_probs=77.2
Q ss_pred CCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEc-cCCCHHHHHHHHHh
Q 039504 37 GLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLM-QKFEIGALLELIQR 115 (240)
Q Consensus 37 G~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~ 115 (240)
|.-+-...|.......+..+..++. .++..+++.+-.+. .+...|...-+++...|..++.. +...++++..++++
T Consensus 102 ~~~~~~~~tY~q~~e~~~~~~~~l~-~lG~~~~~~VGIy~--~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~ 178 (691)
T KOG1256|consen 102 GKGPYEWLTYKQVYERAENLGSGLR-KLGVKEDSKVGIYA--FNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINH 178 (691)
T ss_pred CCCCcEEEEHHHHHHHHHHHHHHHH-HhCCCCCceEEEec--cCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHh
Confidence 3444555666666665555444433 45666555544332 23334444455666666666554 56889999999999
Q ss_pred ccceeeeec-hHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHH
Q 039504 116 HRVSVAAVV-PPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRS 165 (240)
Q Consensus 116 ~~~t~l~~~-p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~ 165 (240)
..+.+++.- +..+..|++..... .+++||.++.-.++ +.++.++..+
T Consensus 179 ~e~~iv~vd~~~k~~~ll~~~~~~--~~~~LK~iI~~~~~-~~~~~~~~~~ 226 (691)
T KOG1256|consen 179 AEISIVFVDNAKKAEKLLEIKEND--SLPSLKAIIQLDEP-SDELKEKAEN 226 (691)
T ss_pred cceeEEEEeCHHHHHHHHhhcccc--cCccceeEEEecCC-chhhhhhhhc
Confidence 999988887 88999998875432 35678888777664 4444444444
No 262
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=43.00 E-value=1.1e+02 Score=20.90 Aligned_cols=84 Identities=19% Similarity=0.047 Sum_probs=47.4
Q ss_pred HHhhhhHHHHHHHhhcCceEEEccC-CCHHHHHHHHHhccceeeeechH------HHHHHHhCCCCCCCCccchhhhhcc
Q 039504 79 FHIYSLNSVLLCSLRAGAGVLLMQK-FEIGALLELIQRHRVSVAAVVPP------LVLALAKNPMVADYDLSSIRVVLSG 151 (240)
Q Consensus 79 ~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l~~~p~------~~~~l~~~~~~~~~~~~~lr~v~~~ 151 (240)
.|..|....-...-..|..++.... .+++++.+...++++.++..+.. .+..+.+..+..+ ...+ .++.|
T Consensus 14 ~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g--~~~i-~vivG 90 (132)
T TIGR00640 14 GHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLG--RPDI-LVVVG 90 (132)
T ss_pred ccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcC--CCCC-EEEEe
Confidence 5666665322333345666666654 67899999999999987666432 2333333332222 2222 25556
Q ss_pred CCCCCHHHHHHHHHh
Q 039504 152 AAPLGKELEDALRSR 166 (240)
Q Consensus 152 G~~~~~~~~~~~~~~ 166 (240)
|.. +.+..+.+++.
T Consensus 91 G~~-~~~~~~~l~~~ 104 (132)
T TIGR00640 91 GVI-PPQDFDELKEM 104 (132)
T ss_pred CCC-ChHhHHHHHHC
Confidence 654 55556666654
No 263
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=42.91 E-value=99 Score=26.50 Aligned_cols=82 Identities=15% Similarity=0.056 Sum_probs=52.9
Q ss_pred eeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEccC-CCH-------HHHHHHH
Q 039504 42 VVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQK-FEI-------GALLELI 113 (240)
Q Consensus 42 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~-------~~~~~~i 113 (240)
..+|...+...+..+...+. ..++.++|++..+++....+- ...++++..|+..+.... ... ++....+
T Consensus 28 ~~~ty~el~~~v~~~a~~L~-~~g~~~gd~V~l~~~~~~~~~--~~~la~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~ 104 (545)
T PRK07768 28 VRHTWGEVHERARRIAGGLA-AAGVGPGDAVAVLAGAPVEIA--PTAQGLWMRGASLTMLHQPTPRTDLAVWAEDTLRVI 104 (545)
T ss_pred eEecHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCchHHH--HHHHHHHHcCccccccCCCCCcchhHHHHHHHHHHH
Confidence 45788888777766665544 457899999998887544332 357888888887666542 222 2334456
Q ss_pred HhccceeeeechH
Q 039504 114 QRHRVSVAAVVPP 126 (240)
Q Consensus 114 ~~~~~t~l~~~p~ 126 (240)
++.++..+.....
T Consensus 105 ~~~~~~~v~~~~~ 117 (545)
T PRK07768 105 GMIGAKAVVVGEP 117 (545)
T ss_pred HhCCCCEEEecch
Confidence 6667776665443
No 264
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=41.98 E-value=20 Score=22.88 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=22.5
Q ss_pred ccccccCCceEEEeeCCCCCCCCC---CCCceEEEe
Q 039504 202 SCGTVVRNAELKVIDPETGASLPH---NQPGEICIR 234 (240)
Q Consensus 202 ~~G~~~~~~~v~i~d~~~~~~~~~---g~~Gel~v~ 234 (240)
.-|.|+++++|++.|...++++.. +..|...+.
T Consensus 23 ~tg~Pv~ga~V~l~~~~~~~~l~~g~TD~~G~a~~~ 58 (97)
T PF11974_consen 23 STGKPVAGAEVELYDSRNGQVLASGKTDADGFASFD 58 (97)
T ss_pred CCCCccCCCEEEEEECCCCcEeeeeeeCCCceEEec
Confidence 348999999999998444666543 344665544
No 265
>PRK05835 fructose-bisphosphate aldolase; Provisional
Probab=41.91 E-value=39 Score=26.87 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=44.1
Q ss_pred CCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCcc---------chhhhhccCCCCCHHHHHHHHHhCCCCcccc
Q 039504 104 FEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLS---------SIRVVLSGAAPLGKELEDALRSRVPQAILGQ 174 (240)
Q Consensus 104 ~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~---------~lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~ 174 (240)
.+|++..+++++.+++.+...--...-+.+.......++. ++-+++-||..++.+..+.+.+. +..+-+
T Consensus 155 TdPeeA~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~L~f~~L~~I~~~~~iPLVLHGgSGip~e~~~~~~~~--g~~~~~ 232 (307)
T PRK05835 155 VNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIPLVLHGASAIPDDVRKSYLDA--GGDLKG 232 (307)
T ss_pred CCHHHHHHHHHhhCCCEEEEccCccccccCCCCCCccCHHHHHHHHHHhCCCEEEeCCCCCchHHhhhhhhh--cccccc
Confidence 4689999999998888765433222222211001111111 34567889999999877776665 555666
Q ss_pred ccccc
Q 039504 175 GYGMT 179 (240)
Q Consensus 175 ~yG~t 179 (240)
.||.+
T Consensus 233 ~~g~~ 237 (307)
T PRK05835 233 SKGVP 237 (307)
T ss_pred ccCCC
Confidence 66654
No 266
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=39.93 E-value=1.6e+02 Score=22.04 Aligned_cols=85 Identities=18% Similarity=0.222 Sum_probs=55.9
Q ss_pred HHHHHhhcCceEEEccCCCHHHHHHHHHhccceee--eechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHH
Q 039504 87 VLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSVA--AVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALR 164 (240)
Q Consensus 87 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l--~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~ 164 (240)
..-.+...|+.++..+.+++ ++.+..+++++..+ ..+|+-.....+.- .+-+|++- ++....++..+.++
T Consensus 79 ~a~~a~~aGA~FivsP~~~~-~vi~~a~~~~i~~iPG~~TptEi~~a~~~G------a~~vKlFP-a~~~gg~~~lk~l~ 150 (212)
T PRK05718 79 QLAQAIEAGAQFIVSPGLTP-PLLKAAQEGPIPLIPGVSTPSELMLGMELG------LRTFKFFP-AEASGGVKMLKALA 150 (212)
T ss_pred HHHHHHHcCCCEEECCCCCH-HHHHHHHHcCCCEeCCCCCHHHHHHHHHCC------CCEEEEcc-chhccCHHHHHHHh
Confidence 45678899999999999998 88888888888887 45677666554431 12233321 22111577777787
Q ss_pred HhCCCCccccccccc
Q 039504 165 SRVPQAILGQGYGMT 179 (240)
Q Consensus 165 ~~~~~~~i~~~yG~t 179 (240)
..||+.++...=|.+
T Consensus 151 ~p~p~~~~~ptGGV~ 165 (212)
T PRK05718 151 GPFPDVRFCPTGGIS 165 (212)
T ss_pred ccCCCCeEEEeCCCC
Confidence 777777765444443
No 267
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=38.08 E-value=2.2e+02 Score=23.35 Aligned_cols=14 Identities=14% Similarity=0.038 Sum_probs=9.1
Q ss_pred cCCcEEEEecchHH
Q 039504 67 TNGDVVLCVLPLFH 80 (240)
Q Consensus 67 ~~~d~~l~~~p~~~ 80 (240)
.+||.++.-.|.+.
T Consensus 118 ~pGd~Vlv~~P~y~ 131 (396)
T PRK09257 118 FPDAKVWVSDPTWP 131 (396)
T ss_pred CCCCeEEECCCCcc
Confidence 56777776666543
No 268
>PRK09490 metH B12-dependent methionine synthase; Provisional
Probab=37.74 E-value=2.4e+02 Score=27.53 Aligned_cols=86 Identities=16% Similarity=0.179 Sum_probs=53.8
Q ss_pred CcEEEEecc-hHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeechH---H---HHHHHhCCCCCCC
Q 039504 69 GDVVLCVLP-LFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVPP---L---VLALAKNPMVADY 140 (240)
Q Consensus 69 ~d~~l~~~p-~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~---~---~~~l~~~~~~~~~ 140 (240)
+.+++.+.+ =.|..|....-...-..|..++... ...++++++.++++++.++..+-. . ++.+++..+..+.
T Consensus 752 gkvvlaTv~GDvHDIGkniV~~~L~~~GfeVIdLG~~vp~e~iv~aa~e~~~diVgLS~L~t~s~~~m~~~i~~L~~~g~ 831 (1229)
T PRK09490 752 GKILMATVKGDVHDIGKNIVGVVLQCNNYEVIDLGVMVPAEKILETAKEENADIIGLSGLITPSLDEMVHVAKEMERQGF 831 (1229)
T ss_pred CeEEEEeCCCCcchHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHhCCCEEEEcCcchhhHHHHHHHHHHHHhcCC
Confidence 455555544 2677788755555557788888876 578899999999999998766432 1 2222233222222
Q ss_pred CccchhhhhccCCCCCHH
Q 039504 141 DLSSIRVVLSGAAPLGKE 158 (240)
Q Consensus 141 ~~~~lr~v~~~G~~~~~~ 158 (240)
.++ +++||.+++..
T Consensus 832 ---~v~-v~vGGa~~s~~ 845 (1229)
T PRK09490 832 ---TIP-LLIGGATTSKA 845 (1229)
T ss_pred ---CCe-EEEEeeccchh
Confidence 222 67888888753
No 269
>PRK10906 DNA-binding transcriptional repressor GlpR; Provisional
Probab=37.27 E-value=1.5e+02 Score=22.70 Aligned_cols=81 Identities=12% Similarity=0.127 Sum_probs=50.7
Q ss_pred hhcCceEEEccCCCHHHHHHHHHh-ccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCC-------CCHHHHHHH
Q 039504 92 LRAGAGVLLMQKFEIGALLELIQR-HRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAP-------LGKELEDAL 163 (240)
Q Consensus 92 l~~G~~~v~~~~~~~~~~~~~i~~-~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~-------~~~~~~~~~ 163 (240)
+--|.++++-.+.....+.+.|.. .+.|++......+..|... +.++++++||+- ..+...+.+
T Consensus 89 I~~g~tIflD~GtT~~~la~~L~~~~~ltVvTNsl~ia~~l~~~--------~~~~villGG~~~~~~~~~~G~~a~~~l 160 (252)
T PRK10906 89 IPNGATLFIDIGTTPEAVAHALLNHSNLRIVTNNLNVANTLMAK--------EDFRIILAGGELRSRDGGIIGEATLDFI 160 (252)
T ss_pred CCCCCEEEEcCcHHHHHHHHHhcCCCCcEEEECcHHHHHHHhhC--------CCCEEEEECCEEecCCCccCCHHHHHHH
Confidence 344566666666677778888865 3577777667777777654 235677888842 335566666
Q ss_pred HHhCCCCcccccccccc
Q 039504 164 RSRVPQAILGQGYGMTE 180 (240)
Q Consensus 164 ~~~~~~~~i~~~yG~tE 180 (240)
++...+..++..-|..+
T Consensus 161 ~~~~~d~afi~~~Gi~~ 177 (252)
T PRK10906 161 SQFRLDFGILGISGIDS 177 (252)
T ss_pred HhccCCEEEEcCCEECC
Confidence 66544555665555553
No 270
>PF07538 ChW: Clostridial hydrophobic W; InterPro: IPR006637 This hydrophobic repeat is found in a number of Chlostridium proteins. It contains a conserved tryptophan residue.
Probab=37.13 E-value=21 Score=18.00 Aligned_cols=12 Identities=33% Similarity=0.401 Sum_probs=9.3
Q ss_pred CCCCCCCCceee
Q 039504 32 SSGTTGLPKGVV 43 (240)
Q Consensus 32 TSGtTG~pk~v~ 43 (240)
++||+|..+.+.
T Consensus 16 ~aGt~G~~~rlE 27 (36)
T PF07538_consen 16 TAGTTGQGLRLE 27 (36)
T ss_pred ecccCCCCcEEE
Confidence 689999887653
No 271
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=36.64 E-value=1.3e+02 Score=25.71 Aligned_cols=79 Identities=10% Similarity=0.040 Sum_probs=53.1
Q ss_pred eeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceee
Q 039504 43 VLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVA 121 (240)
Q Consensus 43 ~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 121 (240)
.+|..++...+..+...+. ..++.+++++..+.+.... +...+++++..|...+... +....++...+++.++..+
T Consensus 48 ~~Ty~el~~~~~~la~~L~-~~g~~~g~~V~v~~~n~~~--~~~~~la~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~l 124 (536)
T PRK10946 48 QFSYRELNQASDNLACSLR-RQGIKPGDTALVQLGNVAE--FYITFFALLKLGVAPVNALFSHQRSELNAYASQIEPALL 124 (536)
T ss_pred cccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCChHH--HHHHHHHHHHcCeEEecCCccccHHHHHHHHhhcCCCEE
Confidence 4788888777766655443 4578999999988875433 3335778888887544322 2345567777888887777
Q ss_pred eec
Q 039504 122 AVV 124 (240)
Q Consensus 122 ~~~ 124 (240)
...
T Consensus 125 i~~ 127 (536)
T PRK10946 125 IAD 127 (536)
T ss_pred EEe
Confidence 664
No 272
>PRK13509 transcriptional repressor UlaR; Provisional
Probab=35.63 E-value=55 Score=25.10 Aligned_cols=53 Identities=17% Similarity=0.115 Sum_probs=35.0
Q ss_pred hcCceEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCC
Q 039504 93 RAGAGVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAA 153 (240)
Q Consensus 93 ~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~ 153 (240)
--|.++++-.+.+...+.+.|...++|++.......+.|.... .++++++||+
T Consensus 92 ~~g~~Ifld~GsT~~~la~~L~~~~ltVvTnsl~ia~~l~~~~--------~~~v~l~GG~ 144 (251)
T PRK13509 92 NPGESVVINCGSTAFLLGRELCGKPVQIITNYLPLANYLIDQE--------HDSVIIMGGQ 144 (251)
T ss_pred CCCCEEEECCcHHHHHHHHHhCCCCeEEEeCCHHHHHHHHhCC--------CCEEEEECCe
Confidence 4466666666666677888886656777777777777776542 3466777774
No 273
>COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only]
Probab=34.73 E-value=2.6e+02 Score=26.13 Aligned_cols=55 Identities=11% Similarity=-0.011 Sum_probs=36.4
Q ss_pred ceEEEccCCCHHHHHHHHHhccceeeeechHHHHH-HHhCCCCCCCCccchhhhhc
Q 039504 96 AGVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLA-LAKNPMVADYDLSSIRVVLS 150 (240)
Q Consensus 96 ~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~-l~~~~~~~~~~~~~lr~v~~ 150 (240)
..+....+-.+..-.+.+.+.++.++++.|.|+.+ ++....+....+..+|.+++
T Consensus 146 v~~~~y~Gdt~~~~r~~~~~~pp~IllTNpdMLh~~llr~~~~~~~~~~~Lk~lVv 201 (851)
T COG1205 146 VTFGRYTGDTPPEERRAIIRNPPDILLTNPDMLHYLLLRNHDAWLWLLRNLKYLVV 201 (851)
T ss_pred ceeeeecCCCChHHHHHHHhCCCCEEEeCHHHHHHHhccCcchHHHHHhcCcEEEE
Confidence 34444444444455558888999999999999998 44444443444556777766
No 274
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=34.13 E-value=50 Score=20.43 Aligned_cols=19 Identities=26% Similarity=0.455 Sum_probs=15.2
Q ss_pred ccccccCCceEEEeeCCCCC
Q 039504 202 SCGTVVRNAELKVIDPETGA 221 (240)
Q Consensus 202 ~~G~~~~~~~v~i~d~~~~~ 221 (240)
.-|.|+++..++++| .+++
T Consensus 16 ~~G~Pv~gAyVRLLD-~sgE 34 (85)
T PF07210_consen 16 RDGEPVGGAYVRLLD-SSGE 34 (85)
T ss_pred cCCcCCCCeEEEEEc-CCCC
Confidence 347899999999999 5565
No 275
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=33.08 E-value=2.3e+02 Score=21.92 Aligned_cols=82 Identities=18% Similarity=0.189 Sum_probs=53.6
Q ss_pred HHHHHhhcCceEEEccCCCHHHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCC-CCHHHHHHHHH
Q 039504 87 VLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAP-LGKELEDALRS 165 (240)
Q Consensus 87 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~-~~~~~~~~~~~ 165 (240)
--+..++..+.++++++.......+.+--.....-.....++..|++.+... ..+.++.||.+ +..+..+.+++
T Consensus 56 ~e~~~~i~~A~li~pDG~gvV~~ar~~~g~~~~~rv~G~Dl~~~Ll~~a~~~-----~~~vfllGgkp~V~~~a~~~l~~ 130 (253)
T COG1922 56 PEFREILNQADLILPDGIGVVRAARRLLGQPLPERVAGTDLVEALLKRAAEE-----GKRVFLLGGKPGVAEQAAAKLRA 130 (253)
T ss_pred HHHHHHHhhcCEEccCchhHHHHHHHHhCccCcccCChHHHHHHHHHHhCcc-----CceEEEecCCHHHHHHHHHHHHH
Confidence 4577788888888888766655553333333333344555666676665433 46788888865 56788888999
Q ss_pred hCCCCccc
Q 039504 166 RVPQAILG 173 (240)
Q Consensus 166 ~~~~~~i~ 173 (240)
.+|+..|.
T Consensus 131 ~~p~l~iv 138 (253)
T COG1922 131 KYPGLKIV 138 (253)
T ss_pred HCCCceEE
Confidence 98866553
No 276
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=32.73 E-value=1.4e+02 Score=19.44 Aligned_cols=47 Identities=15% Similarity=0.051 Sum_probs=33.7
Q ss_pred HHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeech
Q 039504 79 FHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVP 125 (240)
Q Consensus 79 ~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p 125 (240)
.|..|..+.....-..|..++... ...++++.+.+.+.++.++..+.
T Consensus 11 ~H~lG~~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~ 58 (119)
T cd02067 11 GHDIGKNIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSG 58 (119)
T ss_pred hhhHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 566777633333345788877754 57788999999999998776654
No 277
>PRK10681 DNA-binding transcriptional repressor DeoR; Provisional
Probab=32.36 E-value=2e+02 Score=22.08 Aligned_cols=80 Identities=14% Similarity=0.183 Sum_probs=49.4
Q ss_pred hhcCceEEEccCCCHHHHHHHHHhc-cceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCC-------CCHHHHHHH
Q 039504 92 LRAGAGVLLMQKFEIGALLELIQRH-RVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAP-------LGKELEDAL 163 (240)
Q Consensus 92 l~~G~~~v~~~~~~~~~~~~~i~~~-~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~-------~~~~~~~~~ 163 (240)
+--|.++++..+.+...+.+.|.+. +.|++.-.......|... +..+.++.||+- ..+...+.+
T Consensus 90 I~~g~tIflD~GtT~~~la~~L~~~~~ltvvTnsl~i~~~l~~~--------~~~~villGG~~~~~~~~~~G~~~~~~l 161 (252)
T PRK10681 90 VEPNQTLFFDCGTTTPWIIEAIDNELPFTAVCYSLNTFLALQEK--------PHCRAILCGGEFHASNAIFKPLDFQQTL 161 (252)
T ss_pred cCCCCEEEEECCccHHHHHHhcCCCCCeEEEECCHHHHHHHhhC--------CCCEEEEECcEEecCcceeeCHHHHHHH
Confidence 4456666666677778888888764 577766666666666543 235677888842 234455666
Q ss_pred HHhCCCCccccccccc
Q 039504 164 RSRVPQAILGQGYGMT 179 (240)
Q Consensus 164 ~~~~~~~~i~~~yG~t 179 (240)
.+...+..++..=|..
T Consensus 162 ~~~~~D~afig~~gi~ 177 (252)
T PRK10681 162 DNICPDIAFYSAAGVH 177 (252)
T ss_pred HhhCCCEEEEeCceec
Confidence 6654455565555554
No 278
>KOG1257 consensus NADP+-dependent malic enzyme [Energy production and conversion]
Probab=31.96 E-value=68 Score=27.53 Aligned_cols=54 Identities=19% Similarity=0.210 Sum_probs=37.3
Q ss_pred HHHHHHHHHhccceeeee--------chHHHHHHHhCCCCCC------------------CCccchhhhhccCCCCCHHH
Q 039504 106 IGALLELIQRHRVSVAAV--------VPPLVLALAKNPMVAD------------------YDLSSIRVVLSGAAPLGKEL 159 (240)
Q Consensus 106 ~~~~~~~i~~~~~t~l~~--------~p~~~~~l~~~~~~~~------------------~~~~~lr~v~~~G~~~~~~~ 159 (240)
.+++.+++++.||+++.+ ++..++.|.+..++.- .....-|.++.+|.|+++=.
T Consensus 378 ~~~L~e~V~~vKPtvLiG~S~~~g~Fteevl~~Ma~~~erPiIFalSNPT~~aECtae~ay~~t~Gr~ifaSGSPF~pV~ 457 (582)
T KOG1257|consen 378 IKDLEEAVKEVKPTVLIGASGVGGAFTEEVLRAMAKSNERPIIFALSNPTSKAECTAEQAYKWTKGRAIFASGSPFPPVE 457 (582)
T ss_pred HHHHHHHHHhcCCcEEEecccCCccCCHHHHHHHHhcCCCceEEecCCCccccccCHHHHhhhcCCcEEEecCCCCCCce
Confidence 468899999999999987 5677888888765531 00123566777777766533
No 279
>smart00728 ChW Clostridial hydrophobic, with a conserved W residue, domain.
Probab=31.29 E-value=26 Score=18.93 Aligned_cols=12 Identities=25% Similarity=0.277 Sum_probs=9.0
Q ss_pred CCCCCCCCceee
Q 039504 32 SSGTTGLPKGVV 43 (240)
Q Consensus 32 TSGtTG~pk~v~ 43 (240)
++||+|..+.+.
T Consensus 17 ~aGT~G~~lriE 28 (46)
T smart00728 17 IAGTVGQGLRIE 28 (46)
T ss_pred EcccCCCCceeE
Confidence 689999877543
No 280
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=30.63 E-value=36 Score=24.53 Aligned_cols=17 Identities=12% Similarity=0.135 Sum_probs=7.8
Q ss_pred ceeeeechHHHHHHHhC
Q 039504 118 VSVAAVVPPLVLALAKN 134 (240)
Q Consensus 118 ~t~l~~~p~~~~~l~~~ 134 (240)
+-.+-+.|..+..+.+.
T Consensus 51 vfllG~~~~v~~~~~~~ 67 (177)
T TIGR00696 51 IFLYGGKPDVLQQLKVK 67 (177)
T ss_pred EEEECCCHHHHHHHHHH
Confidence 33444455555444443
No 281
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=30.04 E-value=26 Score=14.09 Aligned_cols=8 Identities=50% Similarity=1.037 Sum_probs=5.6
Q ss_pred cccccccc
Q 039504 175 GYGMTEAG 182 (240)
Q Consensus 175 ~yG~tE~~ 182 (240)
.||+|++.
T Consensus 1 GYGSTqTA 8 (16)
T PF00818_consen 1 GYGSTQTA 8 (16)
T ss_pred CCCccccc
Confidence 48888765
No 282
>PRK09196 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=30.03 E-value=71 Score=25.91 Aligned_cols=75 Identities=16% Similarity=0.229 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHhccceeeeechHHHHHHHhC---CCCCCC----------CccchhhhhccCCCCCHHHHHHHHHhCCCC
Q 039504 104 FEIGALLELIQRHRVSVAAVVPPLVLALAKN---PMVADY----------DLSSIRVVLSGAAPLGKELEDALRSRVPQA 170 (240)
Q Consensus 104 ~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~---~~~~~~----------~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~ 170 (240)
.+|++..+++++.+++.|...--...-+.+. +..... .++.+-+++-||..++.++++.+... +-
T Consensus 173 T~PeeA~~Fv~~TgvD~LAvaiGT~HG~Yk~~~~p~~~~LdfdrL~eI~~~v~~vPLVLHGgSG~~~~~~~~~~~~--g~ 250 (347)
T PRK09196 173 TDPEEAADFVKKTQVDALAIAIGTSHGAYKFTRKPTGDVLAIDRIKEIHARLPNTHLVMHGSSSVPQELLDIINEY--GG 250 (347)
T ss_pred CCHHHHHHHHHHhCcCeEhhhhccccCCCCCCCCCChhhccHHHHHHHHhcCCCCCEEEeCCCCCCHHHHHHHHHh--cC
Confidence 4799999999999988765532222222211 000001 11134568889998988777777665 45
Q ss_pred cccccccccc
Q 039504 171 ILGQGYGMTE 180 (240)
Q Consensus 171 ~i~~~yG~tE 180 (240)
.+...||.++
T Consensus 251 ~~~~~~G~~~ 260 (347)
T PRK09196 251 DMPETYGVPV 260 (347)
T ss_pred CccccCCCCH
Confidence 5666677655
No 283
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=29.13 E-value=2.8e+02 Score=21.57 Aligned_cols=129 Identities=16% Similarity=0.153 Sum_probs=60.4
Q ss_pred CCcEEEecCCCCCC-CCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc
Q 039504 24 DDPVALPFSSGTTG-LPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ 102 (240)
Q Consensus 24 ~~~~~i~~TSGtTG-~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 102 (240)
.|--.|+..-|+.+ .+|..++.-.++....... + -|-.+...+... +... .-.-++..|..+++..
T Consensus 29 Gd~kLvvaD~g~~~~~~kLKVykGt~l~~E~~L~--------d-~P~ai~sFy~d~-~ep~---~P~iAVA~G~~vyiYk 95 (257)
T PF14779_consen 29 GDYKLVVADLGTGDQNMKLKVYKGTSLISEITLP--------D-LPSAIVSFYMDE-HEPR---TPAIAVAAGPSVYIYK 95 (257)
T ss_pred CeEEEEEEecCCcCCCceEEEEcCCChhhccccc--------C-CCeEEEEEeccC-CCCC---CCeEEEEeCCEEEEEe
Confidence 34445666666544 4788887776665443211 1 111111111111 0111 2345667787777754
Q ss_pred C-------------CCH--HHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhC
Q 039504 103 K-------------FEI--GALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRV 167 (240)
Q Consensus 103 ~-------------~~~--~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~ 167 (240)
. .++ .++|+.+++.+++.. ..-.+|..|.. .........+++.+ .++++.++.+.+.+
T Consensus 96 NlkP~yKftlP~~~~~~~E~eiW~~~~~~~i~~~-~l~~~L~~lr~-~~~~~LS~rSl~~L-----~l~~ee~~~fi~~~ 168 (257)
T PF14779_consen 96 NLKPFYKFTLPPLEINPLEQEIWQQLREGKIDPE-TLKEMLESLRD-IAGVKLSPRSLRFL-----QLDPEEREAFIERY 168 (257)
T ss_pred cccceeeecCCCCCCCHHHHHHHHhcccCCCCHH-HHHHHHHHHhh-ccCCccCHHHHHHH-----CCCHHHHHHHHHHH
Confidence 2 233 577888876665542 22233444333 11222233355555 23456666666655
Q ss_pred CCCcc
Q 039504 168 PQAIL 172 (240)
Q Consensus 168 ~~~~i 172 (240)
.+.++
T Consensus 169 k~~pl 173 (257)
T PF14779_consen 169 KDSPL 173 (257)
T ss_pred hcCCc
Confidence 34444
No 284
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=28.19 E-value=1.5e+02 Score=19.29 Aligned_cols=45 Identities=24% Similarity=0.321 Sum_probs=29.5
Q ss_pred HHhhhhHHHHHHHhhc-CceEEEcc-CCCHHHHHHHHHhccceeeeec
Q 039504 79 FHIYSLNSVLLCSLRA-GAGVLLMQ-KFEIGALLELIQRHRVSVAAVV 124 (240)
Q Consensus 79 ~~~~g~~~~~~~~l~~-G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~ 124 (240)
.|..|+. .+...+.. |..+.+.+ ..+.+++.+.+.+.+++++..+
T Consensus 12 ~~~lGl~-~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS 58 (121)
T PF02310_consen 12 VHPLGLL-YLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGIS 58 (121)
T ss_dssp STSHHHH-HHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEE
T ss_pred chhHHHH-HHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEE
Confidence 3445555 34444444 87777664 4567999999999998876653
No 285
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=28.08 E-value=3.3e+02 Score=22.10 Aligned_cols=65 Identities=23% Similarity=0.159 Sum_probs=36.7
Q ss_pred ccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc------CCCHHHHHHHHHhcc----ceeeeechHHHHHHHh
Q 039504 64 LYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ------KFEIGALLELIQRHR----VSVAAVVPPLVLALAK 133 (240)
Q Consensus 64 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~------~~~~~~~~~~i~~~~----~t~l~~~p~~~~~l~~ 133 (240)
+++.++|.++... +.+ ....-+.+..|+..++.+ ..|++.+.+.+.+.. ++++++.|.-+..+.+
T Consensus 60 l~~~~gdeVi~p~-~t~----~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~h~~G~~~d~~~i~~ 134 (363)
T PF01041_consen 60 LGLGPGDEVIVPA-YTF----PATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVVHLFGNPADMDAIRA 134 (363)
T ss_dssp TTGGTTSEEEEES-SS-----THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE-GGGB---HHHHHH
T ss_pred cCCCcCceEecCC-Ccc----hHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEecCCCCcccHHHHHH
Confidence 3678899887432 222 224457778899999974 267788887776443 5666667766555543
No 286
>PRK13399 fructose-1,6-bisphosphate aldolase; Provisional
Probab=27.67 E-value=87 Score=25.45 Aligned_cols=76 Identities=17% Similarity=0.264 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHhccceeeeechHHHHHHHhC---CCCC----------CCCccchhhhhccCCCCCHHHHHHHHHhCCCC
Q 039504 104 FEIGALLELIQRHRVSVAAVVPPLVLALAKN---PMVA----------DYDLSSIRVVLSGAAPLGKELEDALRSRVPQA 170 (240)
Q Consensus 104 ~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~---~~~~----------~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~ 170 (240)
.+|++..+++++.+++.+...--...-+.+. +... ...++.+-+++-||..++.++++.+.+. +-
T Consensus 173 T~PeeA~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~~L~~drl~eI~~~v~~vPLVLHGgSGvp~~~~~~~~~~--g~ 250 (347)
T PRK13399 173 TDPDQAVDFVQRTGVDALAIAIGTSHGAYKFTRKPDGDILAIDRIEEIHARLPNTHLVMHGSSSVPQELQEIINAY--GG 250 (347)
T ss_pred CCHHHHHHHHHHHCcCEEhhhhccccCCcCCCCCCChhhccHHHHHHHHhhcCCCCEEEeCCCCCCHHHHHHHHHh--cC
Confidence 4789999999998888665422212222211 0000 0111234568889999999888888665 55
Q ss_pred ccccccccccc
Q 039504 171 ILGQGYGMTEA 181 (240)
Q Consensus 171 ~i~~~yG~tE~ 181 (240)
.+-+.||.++-
T Consensus 251 ~~~~~~g~~~e 261 (347)
T PRK13399 251 KMKETYGVPVE 261 (347)
T ss_pred CccccCCCCHH
Confidence 67788887763
No 287
>COG1153 FwdD Formylmethanofuran dehydrogenase subunit D [Energy production and conversion]
Probab=27.00 E-value=64 Score=21.51 Aligned_cols=27 Identities=26% Similarity=0.497 Sum_probs=19.8
Q ss_pred CCCCCCCCcEEEecCCCCCCCC--ceeee
Q 039504 18 EVAIEPDDPVALPFSSGTTGLP--KGVVL 44 (240)
Q Consensus 18 ~~~~~~~~~~~i~~TSGtTG~p--k~v~~ 44 (240)
+.+..|..-..+--.+++||.| |++..
T Consensus 76 fiPmgpWaN~vi~P~T~sTG~P~fKgipv 104 (128)
T COG1153 76 FIPMGPWANVVIDPDTDSTGMPGFKGIPV 104 (128)
T ss_pred EecCCcccceeeCCCCCCcCCcccCCceE
Confidence 5567777777777788999999 44443
No 288
>PF07610 DUF1573: Protein of unknown function (DUF1573); InterPro: IPR011467 These hypothetical proteins from bacteria, such as Rhodopirellula baltica, Bacteroides thetaiotaomicron and Porphyromonas gingivalis, share a region of conserved sequence towards their N termini.
Probab=26.65 E-value=47 Score=17.58 Aligned_cols=15 Identities=13% Similarity=0.342 Sum_probs=11.9
Q ss_pred CCCCCCCCCceEEEe
Q 039504 220 GASLPHNQPGEICIR 234 (240)
Q Consensus 220 ~~~~~~g~~Gel~v~ 234 (240)
.+++++|+.|.|.|+
T Consensus 30 ~~~i~PGes~~i~v~ 44 (45)
T PF07610_consen 30 KKPIAPGESGKIKVT 44 (45)
T ss_pred cceECCCCEEEEEEE
Confidence 366889999998875
No 289
>PRK09802 DNA-binding transcriptional regulator AgaR; Provisional
Probab=26.58 E-value=2.1e+02 Score=22.26 Aligned_cols=80 Identities=15% Similarity=0.174 Sum_probs=48.0
Q ss_pred cCceEEEccCCCHHHHHHHHHhc-cceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCC-------CCHHHHHHHHH
Q 039504 94 AGAGVLLMQKFEIGALLELIQRH-RVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAP-------LGKELEDALRS 165 (240)
Q Consensus 94 ~G~~~v~~~~~~~~~~~~~i~~~-~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~-------~~~~~~~~~~~ 165 (240)
-|.++++-.+.....+.+.|... +.|++.-.......|... +..+++++||.- ..+...+.+..
T Consensus 106 dgd~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~--------~~~~v~llGG~~~~~~~~~~G~~a~~~l~~ 177 (269)
T PRK09802 106 PGHRVILDSGTTTFEIARLMRKHTDVIAMTNGMNVANALLEA--------EGVELLMTGGHLRRQSQSFYGDQAEQSLQN 177 (269)
T ss_pred CCCEEEECCchHHHHHHHhcCcCCCeEEEeCCHHHHHHHHhC--------CCCEEEEECCEEecCCCceECHHHHHHHHh
Confidence 35555555566667778888654 477766666667666543 235677888842 23455566665
Q ss_pred hCCCCccccccccccc
Q 039504 166 RVPQAILGQGYGMTEA 181 (240)
Q Consensus 166 ~~~~~~i~~~yG~tE~ 181 (240)
...+..++..-|..+.
T Consensus 178 ~~~d~afig~~gi~~~ 193 (269)
T PRK09802 178 YHFDMLFLGVDAIDLE 193 (269)
T ss_pred ccCCEEEEcCceecCC
Confidence 4345556666666543
No 290
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=25.27 E-value=2.3e+02 Score=19.30 Aligned_cols=85 Identities=13% Similarity=0.041 Sum_probs=50.0
Q ss_pred HHhhhhHHHHHHHhhcCceEEEcc-CCCHHHHHHHHHhccceeeeech------HHHHHHHhCCCCCCCCccchhhhhcc
Q 039504 79 FHIYSLNSVLLCSLRAGAGVLLMQ-KFEIGALLELIQRHRVSVAAVVP------PLVLALAKNPMVADYDLSSIRVVLSG 151 (240)
Q Consensus 79 ~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p------~~~~~l~~~~~~~~~~~~~lr~v~~~ 151 (240)
.|..|....-...-..|..++... ...++.+.+...++++.++..+. ..+..+.+..+.. .+.. -.+++|
T Consensus 11 ~HdiGkniv~~~L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~--gl~~-v~vivG 87 (128)
T cd02072 11 CHAVGNKILDHAFTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEA--GLKD-ILLYVG 87 (128)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHC--CCCC-CeEEEE
Confidence 466676633344446788888776 47889999999999998766533 1233343333222 2223 336677
Q ss_pred CCC-CCHHHH----HHHHHh
Q 039504 152 AAP-LGKELE----DALRSR 166 (240)
Q Consensus 152 G~~-~~~~~~----~~~~~~ 166 (240)
|.. ++++.+ +++++.
T Consensus 88 G~~~i~~~d~~~~~~~L~~~ 107 (128)
T cd02072 88 GNLVVGKQDFEDVEKRFKEM 107 (128)
T ss_pred CCCCCChhhhHHHHHHHHHc
Confidence 765 455444 445553
No 291
>PF08438 MMR_HSR1_C: GTPase of unknown function C-terminal; InterPro: IPR013646 This domain is found at the C terminus of IPR002917 from INTERPRO in archaeal and eukaryotic GTP-binding proteins. ; PDB: 1WXQ_A.
Probab=25.09 E-value=1e+02 Score=20.25 Aligned_cols=72 Identities=11% Similarity=0.051 Sum_probs=29.0
Q ss_pred HHHHHHHHhccceeeeechHHHHHHHhCCCCCCCC-c-cch-hhhhccCCCCCHHHHHHHHHhCCCCcccccccccc
Q 039504 107 GALLELIQRHRVSVAAVVPPLVLALAKNPMVADYD-L-SSI-RVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTE 180 (240)
Q Consensus 107 ~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~-~-~~l-r~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE 180 (240)
+.+.++-+++.-..++-++...+..++.+.+++.- . +.= ..-+.+++++++.+...+... .-.+...||.|-
T Consensus 12 ~ni~kl~~~~~~~~vVp~SA~aEl~Lr~a~k~g~I~Y~pGd~~F~i~~~~~l~~~q~~~Le~I--~~~vl~~~g~TG 86 (109)
T PF08438_consen 12 ENIEKLKEKYPDEPVVPTSAAAELALRKAAKAGLIDYIPGDSDFEITDDDKLSDKQKKALEKI--RDNVLERYGSTG 86 (109)
T ss_dssp HHHHHHHHHHTT-EEEEE-HHHHHHHHS-SSS----S----------------------TTHH--HHHHTSSSSS-S
T ss_pred hHHHHHHHhCCCCceeeccHHHHHHHHHHHHCCCEEeCCCCCceEeecccccCHHHHHHHHHH--HHHHHHhcCCch
Confidence 44555555676567777778888777776665411 1 111 112334446777777776664 333677888863
No 292
>cd04910 ACT_AK-Ectoine_1 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase
Probab=25.00 E-value=1.1e+02 Score=18.24 Aligned_cols=51 Identities=33% Similarity=0.437 Sum_probs=32.5
Q ss_pred HHHHHHHHhccceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCCCCHHHHHHHHHhCCCCcc
Q 039504 107 GALLELIQRHRVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAIL 172 (240)
Q Consensus 107 ~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~~~~~~~~~~~~~~~~~~i 172 (240)
.++++.+.+++++++.-. .+-.++-..+.+.........+.+++.||++.|
T Consensus 19 ~~i~~~l~~~~v~ii~K~---------------~nANtit~yl~~~~k~~~r~~~~Le~~~p~a~i 69 (71)
T cd04910 19 LEILELLQRFKVSIIAKD---------------TNANTITHYLAGSLKTIKRLTEDLENRFPNAEI 69 (71)
T ss_pred HHHHHHHHHcCCeEEEEe---------------cCCCeEEEEEEcCHHHHHHHHHHHHHhCccCcc
Confidence 567888888888876541 122244445555545567777888888876654
No 293
>PF11040 DGF-1_C: Dispersed gene family protein 1 of Trypanosoma cruzi C-terminus ; InterPro: IPR021053 Dispersed gene family protein 1 of Trypanosoma cruzi is likely to be highly expressed, and is expressed from the sub-telomeric region []. However, its function is not known. This entry represents the C-terminal domain on this protein.
Probab=21.10 E-value=68 Score=19.26 Aligned_cols=17 Identities=35% Similarity=0.518 Sum_probs=13.4
Q ss_pred CCCCcEEEecCCCCCCC
Q 039504 22 EPDDPVALPFSSGTTGL 38 (240)
Q Consensus 22 ~~~~~~~i~~TSGtTG~ 38 (240)
.|.|.....|.||||+.
T Consensus 35 kphd~tsssyAsgtt~a 51 (87)
T PF11040_consen 35 KPHDMTSSSYASGTTVA 51 (87)
T ss_pred chhhhccccccCCceee
Confidence 45677788899999973
No 294
>PRK10434 srlR DNA-bindng transcriptional repressor SrlR; Provisional
Probab=20.80 E-value=3.4e+02 Score=20.84 Aligned_cols=81 Identities=16% Similarity=0.218 Sum_probs=47.3
Q ss_pred hcCceEEEccCCCHHHHHHHHHhc-cceeeeechHHHHHHHhCCCCCCCCccchhhhhccCCC-------CCHHHHHHHH
Q 039504 93 RAGAGVLLMQKFEIGALLELIQRH-RVSVAAVVPPLVLALAKNPMVADYDLSSIRVVLSGAAP-------LGKELEDALR 164 (240)
Q Consensus 93 ~~G~~~v~~~~~~~~~~~~~i~~~-~~t~l~~~p~~~~~l~~~~~~~~~~~~~lr~v~~~G~~-------~~~~~~~~~~ 164 (240)
.-|.++++..+.....+.+.|.+. +.|++.........|.... +.++++++||.- ..+...+.++
T Consensus 90 ~~g~tIfld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~~-------~~~~v~l~GG~~~~~~~~~~G~~a~~~l~ 162 (256)
T PRK10434 90 HDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELD-------NEQTILMPGGTFRKKSASFHGQLAENAFE 162 (256)
T ss_pred CCCCEEEEcCcHHHHHHHHHhccCCCeEEEECCHHHHHHHhhCC-------CCCEEEEECCEEeCCCCeEECHHHHHHHH
Confidence 445555555566666778888664 4777776677777765431 124677788742 2244455555
Q ss_pred HhCCCCcccccccccc
Q 039504 165 SRVPQAILGQGYGMTE 180 (240)
Q Consensus 165 ~~~~~~~i~~~yG~tE 180 (240)
....+..++..-|..+
T Consensus 163 ~~~~D~afi~~~gi~~ 178 (256)
T PRK10434 163 HFTFDKLFIGTDGIDL 178 (256)
T ss_pred hCcCCEEEEcCceecC
Confidence 5433555665556543
No 295
>PF13213 DUF4021: Protein of unknown function (DUF4021)
Probab=20.72 E-value=43 Score=17.76 Aligned_cols=8 Identities=50% Similarity=0.779 Sum_probs=6.9
Q ss_pred cccccccc
Q 039504 175 GYGMTEAG 182 (240)
Q Consensus 175 ~yG~tE~~ 182 (240)
.|||.|+.
T Consensus 29 lYGMPET~ 36 (46)
T PF13213_consen 29 LYGMPETD 36 (46)
T ss_pred ccCCCccc
Confidence 59999986
No 296
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=20.37 E-value=2.9e+02 Score=22.66 Aligned_cols=62 Identities=21% Similarity=0.228 Sum_probs=33.3
Q ss_pred CCCCCCCceeeeehHHHHHHHHhhhcCCCCCccccCCcEEEEecchHHhhhhHHHHHHHhhcCceEEEcc
Q 039504 33 SGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQ 102 (240)
Q Consensus 33 SGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 102 (240)
.||||.|-.+- +..++-..+...++ .++++++|+++-.- .+.|+...+.+.-+-....++.+
T Consensus 280 agSTG~P~p~n-~~nA~DaVvQfAI~----~Lgf~~edIilygW---SIGGF~~~waAs~YPdVkavvLD 341 (517)
T KOG1553|consen 280 AGSTGLPYPVN-TLNAADAVVQFAIQ----VLGFRQEDIILYGW---SIGGFPVAWAASNYPDVKAVVLD 341 (517)
T ss_pred cccCCCCCccc-chHHHHHHHHHHHH----HcCCCccceEEEEe---ecCCchHHHHhhcCCCceEEEee
Confidence 58999886432 22223333333344 56889999887422 23355444445555555555544
No 297
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=20.30 E-value=90 Score=22.27 Aligned_cols=16 Identities=25% Similarity=0.283 Sum_probs=7.7
Q ss_pred cceeeeechHHHHHHH
Q 039504 117 RVSVAAVVPPLVLALA 132 (240)
Q Consensus 117 ~~t~l~~~p~~~~~l~ 132 (240)
++-.+-+.|..+..+.
T Consensus 48 ~v~llG~~~~~~~~~~ 63 (171)
T cd06533 48 RVFLLGAKPEVLEKAA 63 (171)
T ss_pred eEEEECCCHHHHHHHH
Confidence 3444444555555444
No 298
>PF10102 DUF2341: Domain of unknown function (DUF2341); InterPro: IPR018765 This domain of unknown function is found in various bacterial proteins, including MotA/TolQ/ExbB proton channels and other transport proteins.
Probab=20.19 E-value=2e+02 Score=18.07 Aligned_cols=28 Identities=29% Similarity=0.629 Sum_probs=17.4
Q ss_pred ceEEEeeCCCCCCCC--------CCCCceEEEeCCCC
Q 039504 210 AELKVIDPETGASLP--------HNQPGEICIRGPQI 238 (240)
Q Consensus 210 ~~v~i~d~~~~~~~~--------~g~~Gel~v~~~~~ 238 (240)
-+++++| +++.++| .++...|||+-|.+
T Consensus 4 ~DIRf~d-~~~~~L~ywIE~wd~~~~~A~iWVkvp~i 39 (89)
T PF10102_consen 4 SDIRFYD-SDGTPLPYWIESWDPTNEQALIWVKVPSI 39 (89)
T ss_pred ccEEEEe-CCCCEeEEEEEECCCCCCeEEEEEECCCC
Confidence 3566665 4455542 34568899988865
No 299
>PF13953 PapC_C: PapC C-terminal domain; PDB: 3L48_E 2XET_A 3RFZ_E 2KT6_A.
Probab=20.09 E-value=60 Score=18.98 Aligned_cols=12 Identities=25% Similarity=0.506 Sum_probs=7.1
Q ss_pred CCCCceEEEeCC
Q 039504 225 HNQPGEICIRGP 236 (240)
Q Consensus 225 ~g~~Gel~v~~~ 236 (240)
.|+-|++++++.
T Consensus 28 Vg~~G~vyl~~~ 39 (68)
T PF13953_consen 28 VGQDGQVYLSGL 39 (68)
T ss_dssp B-GCGEEEEEEE
T ss_pred EcCCCEEEEECC
Confidence 355577777763
Done!