BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039505
(342 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 205 HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
H+ A + + +GLEYLHQ H I+ RD+K N+LL+E + + G
Sbjct: 113 HIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFG 157
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 172 FITVYHGQLVKSE---VAMKMLSPSSSQGHV---PIVECHVGALITIPKEGLEYLHQGLK 225
+IT Y G +KS + M+ L S+ + P+ E ++ ++ +GL+YLH K
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERK 137
Query: 226 HPIIQRDMKSTNILLNEKSRISPVEGG 252
I RD+K+ N+LL+E+ + + G
Sbjct: 138 ---IHRDIKAANVLLSEQGDVKLADFG 161
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 18/86 (20%)
Query: 192 PSSSQGHVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEK-------- 243
P+ S +E +GA GL YLH II RD+KS NILL+E
Sbjct: 132 PTMSMSWEQRLEICIGA-----ARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDF 183
Query: 244 --SRISPVEGGTHMSTTIAGTAGFLN 267
S+ G TH+ + GT G+++
Sbjct: 184 GISKKGTELGQTHLXXVVKGTLGYID 209
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 28/175 (16%)
Query: 146 GKQKNNALELSLRVTNNFER------VPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHV 199
GKQ N + ++ ++ + Y+G ++ + LV E + S
Sbjct: 52 GKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV-MEYCLGSASDLLEVHKK 110
Query: 200 PIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTI 259
P+ E + A+ +GL YLH H +I RD+K+ NILL+E + + G+ ++ +
Sbjct: 111 PLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGS--ASIM 165
Query: 260 AGTAGFLNTK---NPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVG-KAVEIA 310
A F+ T P + +++ G + G+ D+ S+G +E+A
Sbjct: 166 APANXFVGTPYWMAPEVILAMDEGQ------------YDGKVDVWSLGITCIELA 208
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 28/175 (16%)
Query: 146 GKQKNNALELSLRVTNNFER------VPYKGGFITVYHGQLVKSEVAMKMLSPSSSQGHV 199
GKQ N + ++ ++ + Y+G ++ + LV E + S
Sbjct: 91 GKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM-EYCLGSASDLLEVHKK 149
Query: 200 PIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTI 259
P+ E + A+ +GL YLH H +I RD+K+ NILL+E + + G+ ++ +
Sbjct: 150 PLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGS--ASIM 204
Query: 260 AGTAGFLNTK---NPVISKSIENGNSHLRDKSTVDLSFKGEFDIISVG-KAVEIA 310
A F+ T P + +++ G + G+ D+ S+G +E+A
Sbjct: 205 APANXFVGTPYWMAPEVILAMDEGQ------------YDGKVDVWSLGITCIELA 247
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNT 268
GL +LHQ H +I RD+K N+LL E + + V+ G +S + T G NT
Sbjct: 141 GLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFG--VSAQLDRTVGRRNT 188
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++GG
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 173 RHTDDEMT-GYVATR 186
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 172 FITVYHGQLVKSE---VAMKMLSPSSSQGHV---PIVECHVGALITIPKEGLEYLHQGLK 225
++T Y+G +K + M+ L S+ + P E + ++ +GL+YLH K
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 226 HPIIQRDMKSTNILLNEKSRISPVEGG 252
I RD+K+ N+LL+E+ + + G
Sbjct: 142 ---IHRDIKAANVLLSEQGDVKLADFG 165
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 13/113 (11%)
Query: 147 KQKNNALELSLRVTNNFERVPYK----GGFIT---VYHGQLVKSEVAMKMLSPSSSQGHV 199
K++N + + L V PY G FIT V+ + A K+ QG
Sbjct: 64 KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKL--KKRMQG-- 119
Query: 200 PIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
PI E +G + + L YL + KH +I RD+K +NILL+E+ +I + G
Sbjct: 120 PIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFG 170
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 64/169 (37%), Gaps = 49/169 (28%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG---------THMSTTIAGTAGFL 266
GL YLH II RD+K+ NILL+E+ + G H+ + GT G +
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHI 210
Query: 267 NTKNPVISKSIENGNSH------------------------------------LRDK--- 287
+ KS E + L++K
Sbjct: 211 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 270
Query: 288 STVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG 336
+ VD+ +G + V + +++A+ S RP M++VV + E G+G
Sbjct: 271 ALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE-GDG 318
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 172 FITVYHGQLVKSE---VAMKMLSPSSSQGHV---PIVECHVGALITIPKEGLEYLHQGLK 225
++T Y+G +K + M+ L S+ + P+ E + ++ +GL+YLH K
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 145
Query: 226 HPIIQRDMKSTNILLNEKSRISPVEGG 252
I RD+K+ N+LL+E + + G
Sbjct: 146 ---IHRDIKAANVLLSEHGEVKLADFG 169
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 18/86 (20%)
Query: 192 PSSSQGHVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEG 251
P+ S +E +GA GL YLH II RD+KS NILL+E +
Sbjct: 132 PTMSMSWEQRLEICIGA-----ARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDF 183
Query: 252 G----------THMSTTIAGTAGFLN 267
G TH+ + GT G+++
Sbjct: 184 GISKKGTELDQTHLXXVVKGTLGYID 209
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 172 FITVYHGQLVKSE---VAMKMLSPSSSQGHV---PIVECHVGALITIPKEGLEYLHQGLK 225
++T Y+G +K + M+ L S+ + P+ E + ++ +GL+YLH K
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 226 HPIIQRDMKSTNILLNEKSRISPVEGG 252
I RD+K+ N+LL+E + + G
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFG 149
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 172 FITVYHGQLVKSE---VAMKMLSPSSSQGHV---PIVECHVGALITIPKEGLEYLHQGLK 225
++T Y+G +K + M+ L S+ + P+ E + ++ +GL+YLH K
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 226 HPIIQRDMKSTNILLNEKSRISPVEGG 252
I RD+K+ N+LL+E + + G
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFG 149
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 172 FITVYHGQLVKSE---VAMKMLSPSSSQGHV---PIVECHVGALITIPKEGLEYLHQGLK 225
++T Y+G +K + M+ L S+ + P+ E + ++ +GL+YLH K
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 140
Query: 226 HPIIQRDMKSTNILLNEKSRISPVEGG 252
I RD+K+ N+LL+E + + G
Sbjct: 141 ---IHRDIKAANVLLSEHGEVKLADFG 164
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 112 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 168
Query: 255 MSTTIAGTAGFLNTK 269
T AGF+ T+
Sbjct: 169 RHTD-DEMAGFVATR 182
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T AGF+ T+
Sbjct: 173 RHTD-DEMAGFVATR 186
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T AGF+ T+
Sbjct: 173 RHTD-DEMAGFVATR 186
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEK 243
G+ YLH PII RD+KS+NIL+ +K
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQK 144
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISP------VEGGTHMSTTIAGTAGFL 266
GLE+LHQ II RD+K N+LL++ RIS ++ G + AGT GF+
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE S + ++ G
Sbjct: 118 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA 174
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 175 RHTDDEMT-GYVATR 188
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE S + ++ G
Sbjct: 122 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA 178
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 179 RHTDDEMT-GYVATR 192
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISP------VEGGTHMSTTIAGTAGFL 266
GLE+LHQ II RD+K N+LL++ RIS ++ G + AGT GF+
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISP------VEGGTHMSTTIAGTAGFL 266
GLE+LHQ II RD+K N+LL++ RIS ++ G + AGT GF+
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISP------VEGGTHMSTTIAGTAGFL 266
GLE+LHQ II RD+K N+LL++ RIS ++ G + AGT GF+
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT------HMSTTIAGTAGFLNT 268
+GL YL + KH I+ RD+K +NIL+N + I + G M+ + GT +++
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 269 K 269
+
Sbjct: 173 E 173
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT------HMSTTIAGTAGFLNT 268
+GL YL + KH I+ RD+K +NIL+N + I + G M+ + GT +++
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 269 K 269
+
Sbjct: 173 E 173
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT------HMSTTIAGTAGFLN 267
+GL YL + KH I+ RD+K +NIL+N + I + G M+ + GT +++
Sbjct: 134 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMS 190
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 173 RHTDDEMT-GYVATR 186
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT------HMSTTIAGTAGFLNT 268
+GL YL + KH I+ RD+K +NIL+N + I + G M+ + GT +++
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 269 K 269
+
Sbjct: 173 E 173
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT------HMSTTIAGTAGFLNT 268
+GL YL + KH I+ RD+K +NIL+N + I + G M+ + GT +++
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 269 K 269
+
Sbjct: 173 E 173
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT------HMSTTIAGTAGFLNT 268
+GL YL + KH I+ RD+K +NIL+N + I + G M+ + GT +++
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 269 K 269
+
Sbjct: 173 E 173
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT------HMSTTIAGTAGFLNT 268
+GL YL + KH I+ RD+K +NIL+N + I + G M+ + GT +++
Sbjct: 142 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 199
Query: 269 K 269
+
Sbjct: 200 E 200
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT------HMSTTIAGTAGFLNT 268
+GL YL + KH I+ RD+K +NIL+N + I + G M+ + GT +++
Sbjct: 177 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 234
Query: 269 K 269
+
Sbjct: 235 E 235
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 63/169 (37%), Gaps = 49/169 (28%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG---------THMSTTIAGTAGFL 266
GL YLH II RD+K+ NILL+E+ + G H+ + G G +
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHI 202
Query: 267 NTKNPVISKSIENGNSH------------------------------------LRDK--- 287
+ KS E + L++K
Sbjct: 203 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 262
Query: 288 STVDLSFKGEFDIISVGKAVEIAMASVSSKVNRRPLMNQVVMVREQGNG 336
+ VD+ +G + V + +++A+ S RP M++VV + E G+G
Sbjct: 263 ALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE-GDG 310
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT------HMSTTIAGTAGFLNT 268
+GL YL + KH I+ RD+K +NIL+N + I + G M+ GT +++
Sbjct: 118 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSP 175
Query: 269 K 269
+
Sbjct: 176 E 176
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 201 IVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIA 260
+ + HV LI GL+Y+H II RD+K +N+ +NE S + ++ G T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE 178
Query: 261 GTAGFLNTK 269
T G++ T+
Sbjct: 179 MT-GYVATR 186
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT------HMSTTIAGTAGFL 266
GL YL + KH I+ RD+K +NIL+N + I + G M+ + GT ++
Sbjct: 126 GLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 180
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 141 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 175
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 141 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 175
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 126 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 160
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 119 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 153
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 142 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 176
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 142 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 176
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 173 ITVYHGQLVKSEVAM--KMLSPSSSQGHVPIVEC--HVGALITIPKE---GLEYLHQGLK 225
I ++ G + K +A+ + SS H+ + E + LI I ++ G++YLH
Sbjct: 94 ILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---A 150
Query: 226 HPIIQRDMKSTNILLNE 242
II RDMKS NI L+E
Sbjct: 151 KNIIHRDMKSNNIFLHE 167
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 144 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 178
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 121 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 155
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 123 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 180 RHTADEMT-GYVATR 193
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 122 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 156
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 120 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 154
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 142 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 176
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 123 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 180 RHTADEMT-GYVATR 193
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 123 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 180 RHTADEMT-GYVATR 193
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH II RD+K NILLNE I + GT
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGT 178
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 149 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 183
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH II RD+K NILLNE I + GT
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGT 178
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 142 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 176
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 145 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 179
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH II RD+K NILLNE I + GT
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGT 178
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH II RD+K NILLNE I + GT
Sbjct: 147 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGT 181
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 144 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 178
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 145 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 179
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 173 RHTDDEMT-GYVATR 186
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
LEYLH +G II RD+K NILLNE I + GT
Sbjct: 144 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGT 178
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
EGLEYLH K+ I RD+K+ NILL E + + G
Sbjct: 127 EGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFG 161
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
EGLEYLH K+ I RD+K+ NILL E + + G
Sbjct: 132 EGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFG 166
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 173 RHTDDEMT-GYVATR 186
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 112 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 168
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 169 RHTDDEMT-GYVATR 182
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 126 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 182
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 183 RHTDDEMT-GYVATR 196
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 121 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 177
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 178 RHTDDEMT-GYVATR 191
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 122 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 178
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 179 RHTDDEMT-GYVATR 192
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 173 RHTDDEMT-GYVATR 186
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 173 RHTDDEMT-GYVATR 186
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 173 RHTDDEMT-GYVATR 186
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 115 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 171
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 172 RHTDDEMT-GYVATR 185
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 173 RHTDDEMT-GYVATR 186
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 173 RHTDDEMT-GYVATR 186
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 112 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 168
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 169 RHTDDEMT-GYVATR 182
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 112 IVKCAKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 168
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 169 RHTDDEMT-GYVATR 182
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 123 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 180 RHTDDEMT-GYVATR 193
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 122 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 178
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 179 RHTDDEMT-GYVATR 192
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 173 RHTDDEMT-GYVATR 186
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 121 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 177
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 178 RHTDDEMT-GYVATR 191
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 173 RHTDDEMT-GYVATR 186
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 121 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA 177
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 178 RHTDDEMT-GYVATR 191
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 113 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 169
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 170 RHTDDEMT-GYVATR 183
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 173 RHTDDEMT-GYVATR 186
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 113 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 169
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 170 RHTDDEMT-GYVATR 183
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 121 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA 177
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 178 RHTDDEMT-GYVATR 191
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 118 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 174
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 175 RHTDDEMT-GYVATR 188
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 114 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 170
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 171 RHTDDEMT-GYVATR 184
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 173 RHTDDEMT-GYVATR 186
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 122 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 178
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 179 RHTDDEMT-GYVATR 192
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 128 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 184
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 185 RHTDDEMT-GYVATR 198
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 118 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 174
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 175 RHTDDEMT-GYVATR 188
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 128 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 184
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 185 RHTDDEMT-GYVATR 198
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 128 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 184
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 185 RHTDDEMT-GYVATR 198
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 127 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 183
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 184 RHTDDEMT-GYVATR 197
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 118 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 174
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 175 RHTDDEMT-GYVATR 188
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 127 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA 183
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 184 RHTDDEMT-GYVATR 197
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 136 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 192
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 193 RHTDDEMT-GYVATR 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 173 ITVYHGQLVKSEVAM--KMLSPSSSQGHVPIVEC--HVGALITIPKE---GLEYLHQGLK 225
I ++ G K ++A+ + SS H+ I+E + LI I ++ G++YLH
Sbjct: 93 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 149
Query: 226 HPIIQRDMKSTNILLNE 242
II RD+KS NI L+E
Sbjct: 150 KSIIHRDLKSNNIFLHE 166
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 135 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 191
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 192 RHTDDEMT-GYVATR 205
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 136 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 192
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 193 RHTDDEMT-GYVATR 206
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 135 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 191
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 192 RHTDDEMT-GYVATR 205
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 173 ITVYHGQLVKSEVAM--KMLSPSSSQGHVPIVEC--HVGALITIPKE---GLEYLHQGLK 225
I ++ G K ++A+ + SS H+ I+E + LI I ++ G++YLH
Sbjct: 94 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 150
Query: 226 HPIIQRDMKSTNILLNE 242
II RD+KS NI L+E
Sbjct: 151 KSIIHRDLKSNNIFLHE 167
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 173 ITVYHGQLVKSEVAM--KMLSPSSSQGHVPIVEC--HVGALITIPKE---GLEYLHQGLK 225
I ++ G K ++A+ + SS H+ I+E + LI I ++ G++YLH
Sbjct: 86 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 142
Query: 226 HPIIQRDMKSTNILLNE 242
II RD+KS NI L+E
Sbjct: 143 KSIIHRDLKSNNIFLHE 159
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 173 ITVYHGQLVKSEVAM--KMLSPSSSQGHVPIVEC--HVGALITIPKE---GLEYLHQGLK 225
I ++ G K ++A+ + SS H+ I+E + LI I ++ G++YLH
Sbjct: 94 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 150
Query: 226 HPIIQRDMKSTNILLNE 242
II RD+KS NI L+E
Sbjct: 151 KSIIHRDLKSNNIFLHE 167
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT- 253
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 254 -HMSTTIAGTAGFLNTKNPVI 273
H + G + P I
Sbjct: 173 RHTDDEMTGXVATRWYRAPEI 193
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 139 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 195
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 196 RHTDDEMT-GYVATR 209
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 145 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 201
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 202 RHTDDEMT-GYVATR 215
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSR 245
G YLH KH I+ RD+K N+LL KSR
Sbjct: 116 GTTYLH---KHNIVHRDLKPENLLLESKSR 142
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSR 245
G YLH KH I+ RD+K N+LL KSR
Sbjct: 133 GTTYLH---KHNIVHRDLKPENLLLESKSR 159
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 203 ECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
EC ++ G+ YLH KH I+ RD+K NILL K+ +
Sbjct: 145 ECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSL 185
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
IV+C HV L+ GL+Y+H II RD+K +N+ +NE S + ++ G
Sbjct: 122 IVKCQALSDEHVQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFG 176
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 173 ITVYHGQLVKSEVAM--KMLSPSSSQGHVPIVEC--HVGALITIPKE---GLEYLHQGLK 225
I ++ G K ++A+ + SS H+ I+E + LI I ++ G++YLH
Sbjct: 66 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 122
Query: 226 HPIIQRDMKSTNILLNE 242
II RD+KS NI L+E
Sbjct: 123 KSIIHRDLKSNNIFLHE 139
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 9/58 (15%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 139 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 193
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 173 ITVYHGQLVKSEVAM--KMLSPSSSQGHVPIVEC--HVGALITIPKE---GLEYLHQGLK 225
I ++ G K ++A+ + SS H+ I+E + LI I ++ G++YLH
Sbjct: 71 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 127
Query: 226 HPIIQRDMKSTNILLNE 242
II RD+KS NI L+E
Sbjct: 128 KSIIHRDLKSNNIFLHE 144
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 173 ITVYHGQLVKSEVAM--KMLSPSSSQGHVPIVEC--HVGALITIPKE---GLEYLHQGLK 225
I ++ G K ++A+ + SS H+ I+E + LI I ++ G++YLH
Sbjct: 71 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 127
Query: 226 HPIIQRDMKSTNILLNE 242
II RD+KS NI L+E
Sbjct: 128 KSIIHRDLKSNNIFLHE 144
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 201 IVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIA 260
+ + HV LI GL+Y+H II RD+K +N+ +NE + ++ G T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE 178
Query: 261 GTAGFLNTK 269
T G++ T+
Sbjct: 179 MT-GYVATR 186
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 201 IVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIA 260
+ + HV LI GL+Y+H II RD+K +N+ +NE + ++ G T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 261 GTAGFLNTK 269
T G++ T+
Sbjct: 179 MT-GYVATR 186
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 173 ITVYHGQLVKSEVAM--KMLSPSSSQGHVPIVEC--HVGALITIPKE---GLEYLHQGLK 225
I ++ G K ++A+ + SS H+ I+E + LI I ++ G++YLH
Sbjct: 66 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 122
Query: 226 HPIIQRDMKSTNILLNE 242
II RD+KS NI L+E
Sbjct: 123 KSIIHRDLKSNNIFLHE 139
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 173 ITVYHGQLVKSEVAM--KMLSPSSSQGHVPIVEC--HVGALITIPKE---GLEYLHQGLK 225
I ++ G K ++A+ + SS H+ I+E + LI I ++ G++YLH
Sbjct: 68 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 124
Query: 226 HPIIQRDMKSTNILLNE 242
II RD+KS NI L+E
Sbjct: 125 KSIIHRDLKSNNIFLHE 141
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT- 253
IV+C HV LI GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 136 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 192
Query: 254 -HMSTTIAGTAGFLNTKNPVI 273
H + G + P I
Sbjct: 193 RHTDDEMXGXVATRWYRAPEI 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNT 268
+G+ YLH +I RD+K N+LL V GGT + GTA + T
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLL--------VAGGTVLKICDFGTACDIQT 159
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNT 268
+G+ YLH +I RD+K N+LL V GGT + GTA + T
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLL--------VAGGTVLKICDFGTACDIQT 158
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 205 HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
HV L+ GL+Y+H II RD+K +N+ +NE S + ++ G
Sbjct: 132 HVQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFG 176
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM--STTIAGTAGFLNTKNP 271
GLE LH + I+ RD+K NILL++ RIS + H+ TI G G + P
Sbjct: 298 GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
Query: 272 VISKS 276
+ K+
Sbjct: 355 EVVKN 359
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 198 HVPIVECHVGALITIPKE---GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
H + + LI I ++ G++YLH II RD+KS NI L+E + +
Sbjct: 111 HASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTV 159
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 14/109 (12%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPV-----EGGTHMST--TIAGTAGFLNT 268
G+EY+ Q PI+ RD++S NI L +PV + GT + +++G G
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQW 192
Query: 269 KNPVISKSIENGNSHLRDKSTVD------LSFKGEFDIISVGKAVEIAM 311
P + E + D + L+ +G FD S GK I M
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM 241
Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 163 FERVPYKGGFITVYHGQLV--KSEVAMKMLSPSSSQGHVPIVE 203
+E+ KGGF V+ G+LV KS VA+K L S+G ++E
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI--------SPVEGGTHMSTTIAGTAGFL 266
+G+EYLH II RD+K +N+L+ E I + +G + + GT F+
Sbjct: 148 KGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFM 204
Query: 267 NTKNPVISKSIENGNS 282
++ ++ I +G +
Sbjct: 205 APESLSETRKIFSGKA 220
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKS--RISPVEGGTHM--STTIAGTAGFLNTKNP 271
GLE LH + I+ RD+K NILL++ RIS + H+ TI G G + P
Sbjct: 298 GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
Query: 272 VISKS 276
+ K+
Sbjct: 355 EVVKN 359
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 198 HVPIVECHVGALITIPKE---GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
H + + LI I ++ G++YLH II RD+KS NI L+E + +
Sbjct: 111 HASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTV 159
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
IV+C HV LI GL+Y+H II RD+K +N+ +NE +
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 164
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
+G+ YLH PI+ RD+KS N+L+++K + + G
Sbjct: 148 KGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFG 184
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 198 HVPIVECHVGALITIPKE---GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
H + + LI I ++ G++YLH II RD+KS NI L+E + +
Sbjct: 99 HASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTV 147
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTH 254
IV+C HV LI GL+Y+H II RD+K +N+ +NE + + G
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLA 172
Query: 255 MSTTIAGTAGFLNTK 269
T T G++ T+
Sbjct: 173 RHTDDEMT-GYVATR 186
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 9/58 (15%)
Query: 201 IVEC------HVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
IV+C HV L+ GL+Y+H II RD+K +N+ +NE + ++ G
Sbjct: 114 IVKCQALSDEHVQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFG 168
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSR 245
G+ Y+H KH I+ RD+K NILL K +
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEK 159
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 203 ECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSR 245
E +I G+ YLH KH I+ RD+K N+LL K +
Sbjct: 135 EVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEK 174
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Query: 193 SSSQGHVPIVEC--HVGALITIPKE---GLEYLHQGLKHPIIQRDMKSTNILLNE 242
SS H+ I+E + LI I ++ G++YLH II RD+KS NI L+E
Sbjct: 88 SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHE 139
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSR 245
G+ Y+H KH I+ RD+K NILL K +
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEK 159
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSR 245
G+ Y+H KH I+ RD+K NILL K +
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEK 159
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 171 GFITVYHGQLVKSEVAMKMLSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGLKHPIIQ 230
GFI ++ Q+ ++ + S G + E +G EGL+YLH + I+
Sbjct: 78 GFIKIFMEQVPGGSLSALL---RSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVH 131
Query: 231 RDMKSTNILLNEKSRI 246
RD+K N+L+N S +
Sbjct: 132 RDIKGDNVLINTYSGV 147
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFL 266
E L Y H + II RD+K N+LL K +PV+ G G +G +
Sbjct: 141 EALRYCHD---NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLV 189
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 14/64 (21%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISP-----------VEGGTHMSTTIAGTA 263
E + ++HQ H I+ RD+K N+LL K + + V+G AGT
Sbjct: 141 ESVNHIHQ---HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTP 197
Query: 264 GFLN 267
G+L+
Sbjct: 198 GYLS 201
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 171 GFITVYHGQLVKSEVAMKMLSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGLKHPIIQ 230
GFI ++ Q+ ++ + S G + E +G EGL+YLH + I+
Sbjct: 92 GFIKIFMEQVPGGSLSALL---RSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVH 145
Query: 231 RDMKSTNILLNEKSRI 246
RD+K N+L+N S +
Sbjct: 146 RDIKGDNVLINTYSGV 161
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNT 268
+EY H +H I+ RD+K N+LL+E + + G + I FL T
Sbjct: 115 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGL---SNIMTDGNFLKT 161
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNT 268
+EY H +H I+ RD+K N+LL+E + + G + I FL T
Sbjct: 125 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGL---SNIMTDGNFLKT 171
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 166 VPYKGGFITVYHG-QLVKSEVAMKMLSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGL 224
VPY G F +VY L++S++ + SSQ P+ HV + GL+Y+H
Sbjct: 126 VPY-GEFKSVYVVLDLMESDLHQII---HSSQ---PLTLEHVRYFLYQLLRGLKYMHSAQ 178
Query: 225 KHPIIQRDMKSTNILLNEKSRI 246
+I RD+K +N+L+NE +
Sbjct: 179 ---VIHRDLKPSNLLVNENCEL 197
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNT 268
+EY H +H I+ RD+K N+LL+E + + G + I FL T
Sbjct: 124 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGL---SNIMTDGNFLKT 170
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNT 268
+EY H +H I+ RD+K N+LL+E + + G + I FL T
Sbjct: 119 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGL---SNIMTDGNFLKT 165
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 201 IVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLN 241
+ E + ++ +GLEYLH K I RD+K+ NILLN
Sbjct: 122 LTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLN 159
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 13/61 (21%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEK----------SRISPVEGGTHMSTTIAGTAGF 265
G+ +LH+ H I RD+KS NILL+E +R S T M + I GT +
Sbjct: 145 GINFLHEN-HH--IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAY 201
Query: 266 L 266
+
Sbjct: 202 M 202
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 217 LEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMS 256
++YLH G ++ RDMK +NILLN + + + G S
Sbjct: 122 IKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRS 158
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 166 VPYKGGFITVYHG-QLVKSEVAMKMLSPSSSQGHVPIVECHVGALITIPKEGLEYLHQGL 224
VPY G F +VY L++S++ + SSQ P+ HV + GL+Y+H
Sbjct: 127 VPY-GEFKSVYVVLDLMESDLHQII---HSSQ---PLTLEHVRYFLYQLLRGLKYMHSAQ 179
Query: 225 KHPIIQRDMKSTNILLNEKSRI 246
+I RD+K +N+L+NE +
Sbjct: 180 ---VIHRDLKPSNLLVNENCEL 198
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNT 268
+EY H +H I+ RD+K N+LL++ + + G + I FL T
Sbjct: 120 AIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGL---SNIMTDGNFLKT 166
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPV 249
G+EY+ Q PI+ RD++S NI L +PV
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPV 166
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 163 FERVPYKGGFITVYHGQLV--KSEVAMKMLSPSSSQGHVPIVE 203
+E+ KGGF V+ G+LV KS VA+K L S+G ++E
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIAGTAGFLNTKN 270
+G+ YLH PI+ R++KS N+L+++K + + G +S A T FL++K+
Sbjct: 148 KGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFG--LSRLKAST--FLSSKS 198
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPV 249
G+EY+ Q PI+ RD++S NI L +PV
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPV 166
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 163 FERVPYKGGFITVYHGQLV--KSEVAMKMLSPSSSQGHVPIVE 203
+E+ KGGF V+ G+LV KS VA+K L S+G ++E
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 13/54 (24%)
Query: 204 CHVGALITIPKEGLEYLHQ--------GLKHPIIQRDMKSTNILLNEKSRISPV 249
CHV ++ GL YLH+ G K I RD KS N+LL KS ++ V
Sbjct: 115 CHVAETMS---RGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLL--KSDLTAV 163
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSR 245
G+ Y+H K+ I+ RD+K N+LL KS+
Sbjct: 161 GITYMH---KNKIVHRDLKPENLLLESKSK 187
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSR 245
G+ Y+H K+ I+ RD+K N+LL KS+
Sbjct: 162 GITYMH---KNKIVHRDLKPENLLLESKSK 188
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSR 245
G+ Y+H K+ I+ RD+K N+LL KS+
Sbjct: 138 GITYMH---KNKIVHRDLKPENLLLESKSK 164
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSR 245
G+ Y+H K+ I+ RD+K N+LL KS+
Sbjct: 144 GITYMH---KNKIVHRDLKPENLLLESKSK 170
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTI 259
GL Y H + ++ RD+K N+L+NE+ + + G + +I
Sbjct: 112 GLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSI 152
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 19/131 (14%)
Query: 145 IGKQKNNALELSLRVTNNFERVPYKGGFITVYHGQLVK---SEVAMKMLSPSSSQGHV-- 199
+ +++ L + L V PY I ++G L + + M+++S S + +
Sbjct: 59 VDEKEQKQLLMDLDVVMRSSDCPY----IVQFYGALFREGDCWICMELMSTSFDKFYKYV 114
Query: 200 ------PIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGT 253
I E +G + + L +L + LK II RD+K +NILL+ I + G
Sbjct: 115 YSVLDDVIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGI 172
Query: 254 --HMSTTIAGT 262
+ +IA T
Sbjct: 173 SGQLVDSIAKT 183
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
GL++LH H ++ RD+K NIL+ +I + G
Sbjct: 132 GLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFG 165
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
GL++LH H ++ RD+K NIL+ +I + G
Sbjct: 132 GLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFG 165
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG-----THMSTTIAGTAGFL 266
LEYLH II RD+K NILL++ I + G ++ + GT ++
Sbjct: 118 ALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYI 170
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 10/68 (14%)
Query: 204 CHVGALITIPKEGLEYLHQ-------GLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMS 256
CH+ + GL YLH+ G K I RD+KS N+LL + G +
Sbjct: 124 CHIAETMA---RGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 257 TTIAGTAG 264
+AG
Sbjct: 181 FEAGKSAG 188
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
GL++LH H ++ RD+K NIL+ +I + G
Sbjct: 132 GLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFG 165
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
GL++LH II RD+K NILL+E+ I + G
Sbjct: 142 GLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFG 175
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 13/61 (21%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI----------SPVEGGTHMSTTIAGTAGF 265
++YLH+ + II RD+K N+LL+ + S + G T + T+ GT +
Sbjct: 265 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 321
Query: 266 L 266
L
Sbjct: 322 L 322
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 13/61 (21%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI----------SPVEGGTHMSTTIAGTAGF 265
++YLH+ + II RD+K N+LL+ + S + G T + T+ GT +
Sbjct: 251 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 307
Query: 266 L 266
L
Sbjct: 308 L 308
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 200 PIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTT 258
P+ E + + + L YLH + II RD+K+ NIL I + G T
Sbjct: 131 PLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 200 PIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTT 258
P+ E + + + L YLH + II RD+K+ NIL I + G T
Sbjct: 131 PLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 200 PIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTT 258
P+ E + + + L YLH + II RD+K+ NIL I + G T
Sbjct: 131 PLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 13/61 (21%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI----------SPVEGGTHMSTTIAGTAGF 265
++YLH+ + II RD+K N+LL+ + S + G T + T+ GT +
Sbjct: 125 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 181
Query: 266 L 266
L
Sbjct: 182 L 182
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 142
Query: 247 SPVEGG 252
+ G
Sbjct: 143 KLADFG 148
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVE 250
L++LH +G+ H RD+K NIL +++SPV+
Sbjct: 123 ALDFLHNKGIAH----RDLKPENILCEHPNQVSPVK 154
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 13/61 (21%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI----------SPVEGGTHMSTTIAGTAGF 265
++YLH+ + II RD+K N+LL+ + S + G T + T+ GT +
Sbjct: 126 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 266 L 266
L
Sbjct: 183 L 183
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
Query: 216 GLEYLH-QGLKHPIIQRDMKSTNILLNEKSRISPVE 250
L++LH +G+ H RD+K NIL +++SPV+
Sbjct: 123 ALDFLHNKGIAH----RDLKPENILCEHPNQVSPVK 154
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 13/61 (21%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI----------SPVEGGTHMSTTIAGTAGF 265
++YLH+ + II RD+K N+LL+ + S + G T + T+ GT +
Sbjct: 126 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 266 L 266
L
Sbjct: 183 L 183
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 200 PIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTT 258
P+ E + + + L YLH + II RD+K+ NIL I + G T
Sbjct: 104 PLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 159
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 13/61 (21%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI----------SPVEGGTHMSTTIAGTAGF 265
++YLH+ + II RD+K N+LL+ + S + G T + T+ GT +
Sbjct: 126 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 266 L 266
L
Sbjct: 183 L 183
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTTIA 260
++++H+ K PII RD+K N+LL+ + I + G+ +TTI+
Sbjct: 148 AVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGS--ATTIS 189
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLL----QGLSFCHS---HRVLHRDLKPQNLLINTEGAI 142
Query: 247 SPVEGG 252
+ G
Sbjct: 143 KLADFG 148
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 91 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPENLLINTEGAI 143
Query: 247 SPVEGG 252
+ G
Sbjct: 144 KLADFG 149
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 215 EGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
+ LE+LH L +I RD+K +N+L+N ++ + G
Sbjct: 147 KALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFG 182
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 142
Query: 247 SPVEGG 252
+ G
Sbjct: 143 KLADFG 148
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 142
Query: 247 SPVEGG 252
+ G
Sbjct: 143 KLADFG 148
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 89 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 141
Query: 247 SPVEGG 252
+ G
Sbjct: 142 KLADFG 147
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 89 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 141
Query: 247 SPVEGG 252
+ G
Sbjct: 142 KLADFG 147
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 142
Query: 247 SPVEGG 252
+ G
Sbjct: 143 KLADFG 148
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 89 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 141
Query: 247 SPVEGG 252
+ G
Sbjct: 142 KLADFG 147
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 142
Query: 247 SPVEGG 252
+ G
Sbjct: 143 KLADFG 148
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 89 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 141
Query: 247 SPVEGG 252
+ G
Sbjct: 142 KLADFG 147
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 142
Query: 247 SPVEGG 252
+ G
Sbjct: 143 KLADFG 148
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 20/86 (23%)
Query: 199 VPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGGTHMSTT 258
V + E H+ L+ G++Y+H I+ RD+K N L+N+ + + G
Sbjct: 151 VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFG------ 201
Query: 259 IAGTAGFLNTKNPVISKSIENGNSHL 284
+A T + ENGNS L
Sbjct: 202 LARTVDY-----------PENGNSQL 216
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 13/61 (21%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI----------SPVEGGTHMSTTIAGTAGF 265
++YLH+ + II RD+K N+LL+ + S + G T + T+ GT +
Sbjct: 132 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 188
Query: 266 L 266
L
Sbjct: 189 L 189
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
GL+Y+H ++ RD+K +N+LLN S + + G
Sbjct: 138 GLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFG 171
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 199 VPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
+P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I + G
Sbjct: 104 LPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFG 150
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 89 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 141
Query: 247 SPVEGG 252
+ G
Sbjct: 142 KLADFG 147
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 91 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 143
Query: 247 SPVEGG 252
+ G
Sbjct: 144 KLADFG 149
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 142
Query: 247 SPVEGG 252
+ G
Sbjct: 143 KLADFG 148
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 90 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 142
Query: 247 SPVEGG 252
+ G
Sbjct: 143 KLADFG 148
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 93 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPENLLINTEGAI 145
Query: 247 SPVEGG 252
+ G
Sbjct: 146 KLADFG 151
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 199 VPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
+P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I + G
Sbjct: 105 LPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFG 151
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 91 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 143
Query: 247 SPVEGG 252
+ G
Sbjct: 144 KLADFG 149
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 91 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPENLLINTEGAI 143
Query: 247 SPVEGG 252
+ G
Sbjct: 144 KLADFG 149
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 97 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 149
Query: 247 SPVEGG 252
+ G
Sbjct: 150 KLADFG 155
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 97 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 149
Query: 247 SPVEGG 252
+ G
Sbjct: 150 KLADFG 155
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 91 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 143
Query: 247 SPVEGG 252
+ G
Sbjct: 144 KLADFG 149
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 94 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 146
Query: 247 SPVEGG 252
+ G
Sbjct: 147 KLADFG 152
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 93 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 145
Query: 247 SPVEGG 252
+ G
Sbjct: 146 KLADFG 151
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 92 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 144
Query: 247 SPVEGG 252
+ G
Sbjct: 145 KLADFG 150
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 199 VPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
+P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I + G
Sbjct: 101 LPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFG 147
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 199 VPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
+P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I + G
Sbjct: 102 LPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFG 148
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 92 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 144
Query: 247 SPVEGG 252
+ G
Sbjct: 145 KLADFG 150
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSR 245
G+ Y H K+ I+ RD+K N+LL KS+
Sbjct: 138 GITYXH---KNKIVHRDLKPENLLLESKSK 164
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 199 VPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRISPVEGG 252
+P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I + G
Sbjct: 105 LPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFG 151
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 94 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 146
Query: 247 SPVEGG 252
+ G
Sbjct: 147 KLADFG 152
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 93 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 145
Query: 247 SPVEGG 252
+ G
Sbjct: 146 KLADFG 151
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 13/68 (19%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI--------SPVEGGTHMSTTIAGTAGFLN 267
G +YLH ++ +I RD+K N+ LNE + + VE T+ GT ++
Sbjct: 129 GCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIA 185
Query: 268 TKNPVISK 275
+ V+SK
Sbjct: 186 PE--VLSK 191
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 11/59 (18%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI--------SPVEGGTHMSTTIAGTAGFL 266
G +YLH ++ +I RD+K N+ LNE + + VE T+ GT ++
Sbjct: 129 GCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYI 184
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 13/68 (19%)
Query: 216 GLEYLHQGLKHPIIQRDMKSTNILLNEKSRI--------SPVEGGTHMSTTIAGTAGFLN 267
G +YLH ++ +I RD+K N+ LNE + + VE T+ GT ++
Sbjct: 133 GCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIA 189
Query: 268 TKNPVISK 275
+ V+SK
Sbjct: 190 PE--VLSK 195
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 93 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPQNLLINTEGAI 145
Query: 247 SPVEGG 252
+ G
Sbjct: 146 KLADFG 151
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 188 KMLSPSSSQG-HVPIVECHVGALITIPKEGLEYLHQGLKHPIIQRDMKSTNILLNEKSRI 246
K + S+ G +P+++ ++ L+ +GL + H H ++ RD+K N+L+N + I
Sbjct: 92 KFMDASALTGIPLPLIKSYLFQLL----QGLAFCHS---HRVLHRDLKPENLLINTEGAI 144
Query: 247 SPVEGG 252
+ G
Sbjct: 145 KLADFG 150
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,185,543
Number of Sequences: 62578
Number of extensions: 355251
Number of successful extensions: 1371
Number of sequences better than 100.0: 242
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 1306
Number of HSP's gapped (non-prelim): 256
length of query: 342
length of database: 14,973,337
effective HSP length: 100
effective length of query: 242
effective length of database: 8,715,537
effective search space: 2109159954
effective search space used: 2109159954
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)