Query 039506
Match_columns 424
No_of_seqs 183 out of 1513
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 10:21:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039506.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039506hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 2.4E-34 5.3E-39 283.8 31.9 319 46-385 9-336 (358)
2 PRK11272 putative DMT superfam 100.0 3.2E-30 7E-35 249.6 30.9 279 51-380 9-288 (292)
3 PRK11453 O-acetylserine/cystei 100.0 2.4E-29 5.1E-34 244.3 30.9 278 52-380 6-290 (299)
4 PRK11689 aromatic amino acid e 100.0 1.1E-29 2.4E-34 246.1 27.2 283 50-380 4-290 (295)
5 PRK10532 threonine and homoser 100.0 4.3E-29 9.2E-34 241.8 30.5 276 48-381 10-285 (293)
6 TIGR00950 2A78 Carboxylate/Ami 100.0 6.1E-29 1.3E-33 236.3 28.3 259 62-373 1-260 (260)
7 PRK15430 putative chlorampheni 100.0 9E-29 2E-33 239.9 26.9 281 47-382 5-290 (296)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 3.2E-27 6.9E-32 229.8 27.7 279 55-380 7-296 (302)
9 PF06027 DUF914: Eukaryotic pr 99.9 2E-25 4.3E-30 216.3 29.8 305 45-387 8-315 (334)
10 TIGR03340 phn_DUF6 phosphonate 99.9 9.2E-26 2E-30 217.3 26.5 274 52-374 3-280 (281)
11 PTZ00343 triose or hexose phos 99.9 4.8E-25 1E-29 218.3 29.5 283 48-378 47-349 (350)
12 TIGR00688 rarD rarD protein. T 99.9 5.8E-24 1.3E-28 202.0 27.1 248 50-352 2-255 (256)
13 COG0697 RhaT Permeases of the 99.9 2E-22 4.3E-27 193.7 30.9 282 47-378 4-288 (292)
14 KOG4510 Permease of the drug/m 99.9 1E-25 2.2E-30 204.0 2.1 294 47-380 35-328 (346)
15 COG2962 RarD Predicted permeas 99.9 1.5E-21 3.2E-26 180.8 25.4 279 48-381 5-287 (293)
16 COG5006 rhtA Threonine/homoser 99.9 8.4E-21 1.8E-25 171.3 27.0 275 51-382 13-287 (292)
17 TIGR00776 RhaT RhaT L-rhamnose 99.8 5.1E-19 1.1E-23 170.9 25.1 278 51-377 2-288 (290)
18 PF08449 UAA: UAA transporter 99.8 9.8E-18 2.1E-22 163.2 27.0 265 79-382 32-302 (303)
19 KOG2765 Predicted membrane pro 99.7 7.4E-17 1.6E-21 153.5 18.6 298 46-380 10-393 (416)
20 KOG1441 Glucose-6-phosphate/ph 99.7 7.2E-17 1.6E-21 154.9 11.5 284 52-384 19-314 (316)
21 KOG2766 Predicted membrane pro 99.6 5.7E-16 1.2E-20 140.1 4.6 290 46-382 14-304 (336)
22 KOG1444 Nucleotide-sugar trans 99.6 4.4E-13 9.6E-18 126.3 24.1 291 49-387 11-310 (314)
23 KOG1580 UDP-galactose transpor 99.6 3.3E-14 7.2E-19 127.2 15.7 254 81-376 55-312 (337)
24 KOG2234 Predicted UDP-galactos 99.6 4.3E-12 9.3E-17 121.4 30.6 299 50-382 15-327 (345)
25 COG2510 Predicted membrane pro 99.6 2.6E-14 5.6E-19 116.4 11.2 135 50-192 3-138 (140)
26 COG2510 Predicted membrane pro 99.5 1.3E-13 2.8E-18 112.3 13.0 135 241-377 5-139 (140)
27 COG5070 VRG4 Nucleotide-sugar 99.5 2.5E-13 5.4E-18 120.7 13.3 279 66-387 22-306 (309)
28 PF04142 Nuc_sug_transp: Nucle 99.5 2.9E-12 6.3E-17 120.3 20.9 231 110-368 13-244 (244)
29 PF00892 EamA: EamA-like trans 99.4 3.6E-13 7.9E-18 112.7 9.4 125 60-192 1-125 (126)
30 KOG1581 UDP-galactose transpor 99.4 1.4E-11 3.1E-16 114.8 20.1 264 78-381 50-317 (327)
31 KOG1443 Predicted integral mem 99.4 4.7E-11 1E-15 111.3 21.7 252 79-376 45-314 (349)
32 PF00892 EamA: EamA-like trans 99.4 1.7E-12 3.6E-17 108.6 8.7 125 249-376 1-125 (126)
33 KOG1442 GDP-fucose transporter 99.3 8.9E-13 1.9E-17 120.7 5.8 267 79-388 61-338 (347)
34 KOG3912 Predicted integral mem 99.3 3E-11 6.4E-16 111.1 12.7 276 63-376 16-333 (372)
35 PF06800 Sugar_transport: Suga 99.2 5.7E-09 1.2E-13 98.0 24.2 253 78-374 11-268 (269)
36 TIGR00950 2A78 Carboxylate/Ami 99.2 4.3E-10 9.3E-15 106.7 15.3 133 48-189 126-260 (260)
37 PF13536 EmrE: Multidrug resis 99.1 1.7E-10 3.7E-15 95.5 8.2 104 84-194 2-107 (113)
38 KOG4314 Predicted carbohydrate 99.1 4.3E-10 9.3E-15 98.5 9.9 215 121-381 60-280 (290)
39 PF03151 TPT: Triose-phosphate 99.1 3.7E-09 8.1E-14 92.0 14.6 137 240-377 1-153 (153)
40 TIGR03340 phn_DUF6 phosphonate 99.0 4.9E-09 1.1E-13 101.0 14.7 133 241-377 3-135 (281)
41 PRK13499 rhamnose-proton sympo 99.0 1.9E-07 4E-12 91.3 25.5 298 46-377 3-341 (345)
42 PRK10532 threonine and homoser 99.0 9.8E-09 2.1E-13 99.5 16.1 136 49-194 147-282 (293)
43 KOG1582 UDP-galactose transpor 99.0 1.9E-08 4.1E-13 92.5 16.4 225 114-380 106-335 (367)
44 PRK15430 putative chlorampheni 99.0 6.2E-09 1.4E-13 101.0 14.2 137 236-376 5-144 (296)
45 PRK11272 putative DMT superfam 99.0 8.7E-09 1.9E-13 99.8 15.1 137 49-193 149-285 (292)
46 TIGR00688 rarD rarD protein. T 99.0 1E-08 2.3E-13 97.3 13.7 135 239-376 2-141 (256)
47 PRK11689 aromatic amino acid e 98.8 6.2E-08 1.3E-12 94.0 14.3 133 49-193 155-287 (295)
48 PLN00411 nodulin MtN21 family 98.8 9.1E-08 2E-12 95.0 15.1 138 239-377 13-156 (358)
49 PF05653 Mg_trans_NIPA: Magnes 98.8 1.6E-07 3.4E-12 91.0 16.3 280 45-380 2-295 (300)
50 PRK02971 4-amino-4-deoxy-L-ara 98.8 1.4E-07 3.1E-12 79.5 13.2 121 239-379 2-124 (129)
51 PRK11453 O-acetylserine/cystei 98.8 2.5E-07 5.4E-12 90.0 15.8 138 49-193 142-287 (299)
52 KOG1583 UDP-N-acetylglucosamin 98.7 7.3E-08 1.6E-12 89.0 10.7 262 80-377 34-314 (330)
53 TIGR00803 nst UDP-galactose tr 98.7 1.2E-07 2.5E-12 88.2 12.0 203 140-375 3-222 (222)
54 TIGR00817 tpt Tpt phosphate/ph 98.6 2.1E-07 4.6E-12 90.5 11.5 140 48-193 143-293 (302)
55 PF13536 EmrE: Multidrug resis 98.6 2.1E-07 4.5E-12 76.9 9.2 106 274-380 3-109 (113)
56 COG4975 GlcU Putative glucose 98.5 1.6E-08 3.5E-13 91.8 0.1 278 51-377 3-285 (288)
57 COG0697 RhaT Permeases of the 98.5 4.5E-06 9.7E-11 79.9 16.4 134 48-192 152-286 (292)
58 TIGR00776 RhaT RhaT L-rhamnose 98.5 2.9E-06 6.2E-11 82.1 14.2 128 49-192 151-287 (290)
59 PF03151 TPT: Triose-phosphate 98.5 4.6E-06 9.9E-11 72.4 13.6 134 51-191 1-151 (153)
60 PTZ00343 triose or hexose phos 98.4 7.8E-06 1.7E-10 81.2 16.5 134 243-377 53-186 (350)
61 PRK15051 4-amino-4-deoxy-L-ara 98.4 6E-06 1.3E-10 67.9 11.4 70 117-192 39-108 (111)
62 COG5006 rhtA Threonine/homoser 98.4 5.3E-06 1.2E-10 76.0 11.8 135 49-192 147-281 (292)
63 PRK15051 4-amino-4-deoxy-L-ara 98.3 6.9E-06 1.5E-10 67.6 10.6 67 310-376 42-108 (111)
64 PF06027 DUF914: Eukaryotic pr 98.2 4.2E-05 9.1E-10 74.9 14.6 142 46-195 164-307 (334)
65 COG2962 RarD Predicted permeas 98.2 1.6E-05 3.5E-10 74.7 10.8 138 238-378 6-145 (293)
66 PRK02971 4-amino-4-deoxy-L-ara 98.1 3.5E-05 7.6E-10 65.0 11.6 118 50-192 2-121 (129)
67 KOG2922 Uncharacterized conser 98.0 6.2E-05 1.3E-09 71.6 11.3 281 44-380 15-309 (335)
68 PF06800 Sugar_transport: Suga 97.9 9.7E-05 2.1E-09 69.7 11.5 131 49-189 137-267 (269)
69 KOG4510 Permease of the drug/m 97.8 5.6E-06 1.2E-10 76.4 1.3 153 222-381 21-173 (346)
70 PRK10452 multidrug efflux syst 97.8 0.00031 6.8E-09 58.3 11.1 69 311-379 36-105 (120)
71 PF04657 DUF606: Protein of un 97.6 0.0015 3.2E-08 55.9 13.0 130 241-374 3-138 (138)
72 PF08449 UAA: UAA transporter 97.6 0.0015 3.3E-08 63.5 14.4 137 50-193 154-297 (303)
73 PRK09541 emrE multidrug efflux 97.5 0.00056 1.2E-08 56.0 7.9 67 312-378 37-104 (110)
74 PF05653 Mg_trans_NIPA: Magnes 97.5 0.0012 2.7E-08 63.9 11.6 121 236-379 4-124 (300)
75 PF06379 RhaT: L-rhamnose-prot 97.4 0.057 1.2E-06 52.5 21.7 300 45-377 2-340 (344)
76 COG3238 Uncharacterized protei 97.3 0.0033 7.1E-08 54.0 11.3 137 238-377 4-146 (150)
77 PRK10650 multidrug efflux syst 97.3 0.003 6.4E-08 51.6 9.7 64 122-191 42-106 (109)
78 PRK10452 multidrug efflux syst 97.2 0.001 2.2E-08 55.2 6.8 67 121-193 36-103 (120)
79 PRK09541 emrE multidrug efflux 97.2 0.0013 2.9E-08 53.8 7.1 67 121-193 36-103 (110)
80 PF04657 DUF606: Protein of un 97.2 0.0066 1.4E-07 51.9 11.5 130 52-190 3-138 (138)
81 COG2076 EmrE Membrane transpor 97.2 0.0016 3.6E-08 52.3 7.2 65 314-378 39-104 (106)
82 COG2076 EmrE Membrane transpor 97.2 0.001 2.2E-08 53.5 5.9 65 122-192 37-102 (106)
83 PRK11431 multidrug efflux syst 97.1 0.0027 5.8E-08 51.5 8.2 66 312-377 36-102 (105)
84 PRK10650 multidrug efflux syst 97.1 0.0073 1.6E-07 49.3 10.6 64 313-376 43-107 (109)
85 KOG2765 Predicted membrane pro 97.1 0.0045 9.9E-08 60.2 10.8 145 44-194 241-391 (416)
86 PRK11431 multidrug efflux syst 97.1 0.0018 4E-08 52.5 6.8 65 122-192 36-101 (105)
87 PF10639 UPF0546: Uncharacteri 96.9 0.0028 6.1E-08 51.8 6.1 110 56-191 2-112 (113)
88 PRK13499 rhamnose-proton sympo 96.8 0.051 1.1E-06 53.5 15.6 144 48-193 172-341 (345)
89 PF04142 Nuc_sug_transp: Nucle 96.7 0.011 2.5E-07 55.5 9.8 80 302-382 15-94 (244)
90 PF00893 Multi_Drug_Res: Small 96.7 0.013 2.9E-07 46.4 8.6 55 314-368 38-93 (93)
91 PF07857 DUF1632: CEO family ( 96.6 0.0054 1.2E-07 57.7 7.1 135 240-385 1-142 (254)
92 KOG1441 Glucose-6-phosphate/ph 96.6 0.0058 1.3E-07 59.3 7.4 139 47-193 160-307 (316)
93 COG4975 GlcU Putative glucose 96.5 0.0021 4.5E-08 59.1 3.2 133 240-381 3-140 (288)
94 PF10639 UPF0546: Uncharacteri 96.3 0.024 5.3E-07 46.4 8.2 109 246-375 3-112 (113)
95 PF00893 Multi_Drug_Res: Small 96.1 0.013 2.8E-07 46.5 5.5 56 122-183 36-92 (93)
96 PF07857 DUF1632: CEO family ( 95.9 0.1 2.2E-06 49.2 11.5 200 51-265 1-209 (254)
97 KOG1581 UDP-galactose transpor 95.7 0.12 2.7E-06 49.2 10.7 141 46-193 168-313 (327)
98 COG3238 Uncharacterized protei 95.3 0.26 5.7E-06 42.4 10.8 136 49-191 4-144 (150)
99 KOG2922 Uncharacterized conser 95.1 0.013 2.9E-07 56.1 2.3 126 236-384 18-143 (335)
100 KOG4314 Predicted carbohydrate 94.1 0.063 1.4E-06 47.9 4.1 63 318-380 66-128 (290)
101 KOG2234 Predicted UDP-galactos 94.0 1.8 3.8E-05 42.4 14.1 139 239-378 15-165 (345)
102 KOG1580 UDP-galactose transpor 93.9 0.72 1.6E-05 42.5 10.5 159 15-193 150-313 (337)
103 TIGR00803 nst UDP-galactose tr 93.8 0.22 4.7E-06 46.0 7.4 60 125-190 162-221 (222)
104 KOG1444 Nucleotide-sugar trans 91.4 4.7 0.0001 39.0 12.8 134 241-378 14-150 (314)
105 PF06379 RhaT: L-rhamnose-prot 91.0 1.8 3.9E-05 42.3 9.7 143 236-383 4-159 (344)
106 KOG1443 Predicted integral mem 88.7 2.3 4.9E-05 40.9 8.2 121 259-379 36-158 (349)
107 PRK02237 hypothetical protein; 84.0 6.2 0.00014 31.8 7.2 47 334-380 62-108 (109)
108 KOG3912 Predicted integral mem 83.9 2.6 5.7E-05 40.0 5.8 65 314-378 95-159 (372)
109 KOG1442 GDP-fucose transporter 83.8 1.4 3.1E-05 41.6 4.1 143 47-196 182-330 (347)
110 PRK02237 hypothetical protein; 83.7 8.7 0.00019 31.0 7.9 53 135-193 51-105 (109)
111 KOG4831 Unnamed protein [Funct 82.8 21 0.00045 28.8 9.6 110 55-192 8-124 (125)
112 COG5070 VRG4 Nucleotide-sugar 82.3 5.4 0.00012 36.6 7.1 137 50-193 155-296 (309)
113 PF02694 UPF0060: Uncharacteri 80.3 7.7 0.00017 31.3 6.5 55 133-193 48-103 (107)
114 PF02694 UPF0060: Uncharacteri 78.0 4.7 0.0001 32.5 4.6 46 335-380 61-106 (107)
115 COG1742 Uncharacterized conser 75.8 17 0.00038 29.1 7.2 48 333-380 60-107 (109)
116 PF05297 Herpes_LMP1: Herpesvi 73.8 1.1 2.3E-05 42.4 0.0 26 159-190 69-94 (381)
117 KOG1582 UDP-galactose transpor 73.8 16 0.00035 34.6 7.7 112 77-195 218-334 (367)
118 KOG2766 Predicted membrane pro 73.4 1.6 3.5E-05 40.8 1.1 111 265-382 45-155 (336)
119 PF07168 Ureide_permease: Urei 72.1 2.1 4.5E-05 41.1 1.5 129 245-376 2-145 (336)
120 COG1480 Predicted membrane-ass 71.2 1.6E+02 0.0034 31.9 17.2 20 149-168 336-356 (700)
121 PF06570 DUF1129: Protein of u 67.6 97 0.0021 28.1 11.6 30 114-144 146-175 (206)
122 COG4858 Uncharacterized membra 67.6 92 0.002 27.9 10.6 101 52-159 102-202 (226)
123 KOG1583 UDP-N-acetylglucosamin 66.6 1.2E+02 0.0027 29.0 12.1 140 47-193 161-314 (330)
124 PRK13108 prolipoprotein diacyl 66.3 1.7E+02 0.0036 30.3 22.4 47 334-380 226-277 (460)
125 COG1742 Uncharacterized conser 65.3 33 0.00072 27.5 6.7 40 148-193 65-104 (109)
126 PF03547 Mem_trans: Membrane t 62.6 1.6E+02 0.0034 29.2 13.1 18 304-321 62-79 (385)
127 KOG4831 Unnamed protein [Funct 58.9 12 0.00026 30.0 3.3 59 318-376 65-124 (125)
128 PF04342 DUF486: Protein of un 56.2 17 0.00037 29.2 3.7 31 346-376 77-107 (108)
129 PF07168 Ureide_permease: Urei 52.5 8.5 0.00018 37.1 1.7 129 55-190 1-143 (336)
130 PRK11902 ampG muropeptide tran 51.6 2.5E+02 0.0055 27.7 13.0 18 358-375 369-386 (402)
131 PRK11010 ampG muropeptide tran 51.0 3E+02 0.0065 28.4 13.5 54 325-378 345-402 (491)
132 PF05977 MFS_3: Transmembrane 49.2 3.4E+02 0.0074 28.6 21.9 17 336-352 351-367 (524)
133 TIGR00836 amt ammonium transpo 45.6 3.4E+02 0.0074 27.5 14.0 286 76-408 89-401 (403)
134 COG0004 AmtB Ammonia permease 42.4 3.8E+02 0.0083 27.2 13.4 43 245-289 289-331 (409)
135 COG4657 RnfA Predicted NADH:ub 42.2 2.1E+02 0.0046 25.0 8.4 52 236-287 129-185 (193)
136 PRK06638 NADH:ubiquinone oxido 41.4 2.7E+02 0.0059 25.1 11.8 32 346-377 133-166 (198)
137 COG0670 Integral membrane prot 41.0 3E+02 0.0066 25.6 16.3 49 110-158 84-132 (233)
138 COG3965 Predicted Co/Zn/Cd cat 39.9 3.4E+02 0.0074 25.9 11.9 110 56-166 100-212 (314)
139 TIGR02865 spore_II_E stage II 38.8 5.9E+02 0.013 28.3 16.3 44 142-191 11-54 (764)
140 PRK10666 ammonium transporter; 37.5 4.7E+02 0.01 26.8 17.3 22 117-138 222-243 (428)
141 COG3086 RseC Positive regulato 33.9 26 0.00056 29.9 1.6 28 326-353 69-96 (150)
142 PF15102 TMEM154: TMEM154 prot 32.9 67 0.0015 27.5 4.0 25 362-386 66-90 (146)
143 PF00909 Ammonium_transp: Ammo 31.8 5.5E+02 0.012 25.9 17.8 48 240-289 277-325 (399)
144 PF08507 COPI_assoc: COPI asso 31.1 46 0.001 28.0 2.8 15 362-376 90-104 (136)
145 PRK10599 calcium/sodium:proton 30.5 5.7E+02 0.012 25.6 13.1 18 312-329 114-131 (366)
146 PF04342 DUF486: Protein of un 30.3 3E+02 0.0064 22.3 7.3 32 154-191 75-106 (108)
147 COG3169 Uncharacterized protei 28.4 90 0.002 24.8 3.7 31 346-376 84-114 (116)
148 TIGR03644 marine_trans_1 proba 27.7 6.6E+02 0.014 25.5 16.6 65 308-372 297-363 (404)
149 PF05297 Herpes_LMP1: Herpesvi 27.6 18 0.0004 34.3 -0.3 63 316-378 119-185 (381)
150 PF07698 7TM-7TMR_HD: 7TM rece 26.2 4.5E+02 0.0099 23.1 17.9 33 257-290 120-152 (194)
151 PRK10489 enterobactin exporter 25.2 6.7E+02 0.015 24.7 14.5 19 359-377 380-398 (417)
152 PF09656 PGPGW: Putative trans 24.0 2E+02 0.0043 20.2 4.4 44 178-264 6-49 (53)
153 PF07330 DUF1467: Protein of u 23.0 3.6E+02 0.0078 20.9 6.3 58 14-71 16-73 (85)
154 PF09586 YfhO: Bacterial membr 22.9 8.3E+02 0.018 27.1 11.7 17 84-100 338-354 (843)
155 KOG3762 Predicted transporter 22.1 3.4E+02 0.0074 28.9 7.6 17 363-379 534-550 (618)
156 PF04550 Phage_holin_2: Phage 21.8 3.8E+02 0.0082 20.9 5.9 25 239-263 61-85 (89)
157 COG0534 NorM Na+-driven multid 21.6 8.6E+02 0.019 24.9 10.7 126 227-352 50-186 (455)
158 TIGR03644 marine_trans_1 proba 21.2 8.8E+02 0.019 24.6 15.5 47 241-289 297-343 (404)
159 COG2271 UhpC Sugar phosphate p 21.1 9.2E+02 0.02 24.8 10.4 51 235-287 62-112 (448)
160 COG3169 Uncharacterized protei 21.1 1.3E+02 0.0029 23.9 3.4 31 155-191 83-113 (116)
161 PRK01061 Na(+)-translocating N 20.7 7.1E+02 0.015 23.4 11.9 23 354-376 180-202 (244)
162 PF00909 Ammonium_transp: Ammo 20.7 8.7E+02 0.019 24.4 18.6 69 306-374 276-363 (399)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=283.80 Aligned_cols=319 Identities=26% Similarity=0.476 Sum_probs=248.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccc-ccCcCCHHHHHHHHHHHHHH
Q 039506 46 REVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKR-TRLPMTRRLLMSFFFLGLTG 124 (424)
Q Consensus 46 ~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~l~~g~lg 124 (424)
+|+.+.+..|++..++++...++.|.+.+.|++|..+.++|+.++.++++++.++++++ .+++.+++++..+.+.|+++
T Consensus 9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g 88 (358)
T PLN00411 9 RREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG 88 (358)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence 44668899999999999999999999999999999999999999999999988776442 23334578888899999997
Q ss_pred HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHH------hhcccccccccccchhhHHHHHHHhHhhhhhccCCc
Q 039506 125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMM------GTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPA 198 (424)
Q Consensus 125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~------l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~ 198 (424)
..++.+++.|++|++++.++++.++.|+++.++++++ +|||+++++ ++|++++++|+.++...+++.
T Consensus 89 -~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~------~~G~~l~~~Gv~ll~~~~g~~ 161 (358)
T PLN00411 89 -SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAK------VMGTILSLIGALVVIFYHGPR 161 (358)
T ss_pred -HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHH------HHHHHHHHHHHHHHHHccCcc
Confidence 6788899999999999999999999999999999999 589999888 999999999999988544432
Q ss_pred ccCCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHH
Q 039506 199 LFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFF 278 (424)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~ 278 (424)
....++..+ .+.+++..+. ..+...+..|++++++++++|++|.++.|+..++++++...++++..+
T Consensus 162 ~~~~~~~~~---~~~~~~~~~~----------~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~ 228 (358)
T PLN00411 162 VFVASSPPY---LNFRQLSPPL----------SSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVC 228 (358)
T ss_pred ccccccccc---cccccccccc----------CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHH
Confidence 111000000 0000000000 001124567999999999999999999999999987555667777777
Q ss_pred HHHHHHHHHHHhcCC-Cccccc-chhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCC
Q 039506 279 GAVLMVITAFFLTND-STEWSL-TQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSP 356 (424)
Q Consensus 279 ~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~ 356 (424)
+.+.+.+.....+.. ...|.. .......+++.+++ +.++|.+|++++++.++++++++.+++|+++++++++++||+
T Consensus 229 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~ 307 (358)
T PLN00411 229 VSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDS 307 (358)
T ss_pred HHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCC
Confidence 766666655554422 222221 11224456677765 668999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHhhheeeeecccccCC
Q 039506 357 IYLGSVLGGCLIIAGLYMVTWVSYRERQA 385 (424)
Q Consensus 357 ~~~~~~lG~~lii~g~~l~~~~~~~~~~~ 385 (424)
+++.+++|+++|++|+++..+.++++.++
T Consensus 308 lt~~~~iG~~LIl~Gv~l~~~~~~~~~~~ 336 (358)
T PLN00411 308 LYLGCLIGGILITLGFYAVMWGKANEEKD 336 (358)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 99999999999999999988765555433
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=3.2e-30 Score=249.59 Aligned_cols=279 Identities=17% Similarity=0.188 Sum_probs=233.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHH
Q 039506 51 AHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQL 130 (424)
Q Consensus 51 ~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~ 130 (424)
-.+..++..++||.++++.|...+ +++|..++++|+.++.++++++...++++ ..++++++.....|.++...++.
T Consensus 9 ~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~ 84 (292)
T PRK11272 9 LFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRGHP---LPTLRQWLNAALIGLLLLAVGNG 84 (292)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhCCC---CCcHHHHHHHHHHHHHHHHHHHH
Confidence 456688889999999999999888 59999999999999999998887654432 22567788888889887677888
Q ss_pred HHHHHh-hccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCcc
Q 039506 131 LFLLGL-SYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVG 209 (424)
Q Consensus 131 ~~~~al-~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~ 209 (424)
+++.+. ++++++.++++.++.|+++.+++++ +|||+++++ ++|++++++|+.++.. ++..
T Consensus 85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~-~~~~----------- 145 (292)
T PRK11272 85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNS-GGNL----------- 145 (292)
T ss_pred HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhc-Cccc-----------
Confidence 999999 9999999999999999999999986 699999999 9999999999998862 1100
Q ss_pred ccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 039506 210 ENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFF 289 (424)
Q Consensus 210 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 289 (424)
+....|++++++++++||.|.+..|+..++ + +.....++...+.+.+.+....
T Consensus 146 -------------------------~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~ 198 (292)
T PRK11272 146 -------------------------SGNPWGAILILIASASWAFGSVWSSRLPLP-V-GMMAGAAEMLAAGVVLLIASLL 198 (292)
T ss_pred -------------------------ccchHHHHHHHHHHHHHHHHHHHHHhcCCC-c-chHHHHHHHHHHHHHHHHHHHH
Confidence 022479999999999999999999997644 3 3456778888888777776655
Q ss_pred hcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHH
Q 039506 290 LTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLII 369 (424)
Q Consensus 290 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii 369 (424)
.+... ....+...|..+++.+++++.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++
T Consensus 199 ~~~~~-~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi 277 (292)
T PRK11272 199 SGERL-TALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIV 277 (292)
T ss_pred cCCcc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 43221 11124578899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhheeeeecc
Q 039506 370 AGLYMVTWVSY 380 (424)
Q Consensus 370 ~g~~l~~~~~~ 380 (424)
.|+++..+.++
T Consensus 278 ~gv~~~~~~~~ 288 (292)
T PRK11272 278 FAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHh
Confidence 99998766443
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.97 E-value=2.4e-29 Score=244.35 Aligned_cols=278 Identities=18% Similarity=0.257 Sum_probs=216.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHH
Q 039506 52 HGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLL 131 (424)
Q Consensus 52 ~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~ 131 (424)
.++.++++++||.++++.|...++ ++|..+.++|+.++++.++++.. +++ .+++ ..+..|++.....+.+
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~~--~~~----~~~~---~~~~~g~~~~~~~~~~ 75 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFVA--RPK----VPLN---LLLGYGLTISFGQFAF 75 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHhc--CCC----CchH---HHHHHHHHHHHHHHHH
Confidence 356888999999999999998885 99999999999998776665432 111 1222 3444455544566677
Q ss_pred HHHHhhc-cCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccc
Q 039506 132 FLLGLSY-TNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGE 210 (424)
Q Consensus 132 ~~~al~~-~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~ 210 (424)
++.++++ .+++.++++.++.|+++.+++++++|||+++++ ++|++++++|+.++.. ++. +
T Consensus 76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~--~~~--~--------- 136 (299)
T PRK11453 76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIE--DSL--N--------- 136 (299)
T ss_pred HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhcc--ccC--C---------
Confidence 8889998 588999999999999999999999999999999 9999999999999872 110 0
Q ss_pred cccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCc--chhHHHHHHHHHHHHHHHHH
Q 039506 211 NEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSS--LSVTAYSYFFGAVLMVITAF 288 (424)
Q Consensus 211 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~ 288 (424)
+.+....|++++++++++|++|.+..|+..++.+.+ .....+....+.+.......
T Consensus 137 ----------------------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (299)
T PRK11453 137 ----------------------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASL 194 (299)
T ss_pred ----------------------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHH
Confidence 001234799999999999999999999987655422 22334444444443333333
Q ss_pred HhcCCCc---cc-ccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHH
Q 039506 289 FLTNDST---EW-SLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLG 364 (424)
Q Consensus 289 ~~~~~~~---~~-~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG 364 (424)
..+.+.. .+ ..+...|..++++++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG 274 (299)
T PRK11453 195 ILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLG 274 (299)
T ss_pred HhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHH
Confidence 3332211 11 2356789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhheeeeecc
Q 039506 365 GCLIIAGLYMVTWVSY 380 (424)
Q Consensus 365 ~~lii~g~~l~~~~~~ 380 (424)
++++++|+++..+.++
T Consensus 275 ~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 275 AVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHhcchh
Confidence 9999999998776543
No 4
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.97 E-value=1.1e-29 Score=246.09 Aligned_cols=283 Identities=13% Similarity=0.140 Sum_probs=215.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHH
Q 039506 50 RAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQ 129 (424)
Q Consensus 50 ~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~ 129 (424)
++++++++++++||.+++..|...+. ++|..+.++|+.++.++++++.. ++.. +++.++....+.++...++
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~----~~~~~~~~~~~~l~~~~~~ 75 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRL----RQFPKRYLLAGGLLFVSYE 75 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---cccc----ccccHHHHHHHhHHHHHHH
Confidence 56778999999999999999999885 99999999999999988887531 1111 1112233444555567788
Q ss_pred HHHHHHhhc----cCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCC
Q 039506 130 LLFLLGLSY----TNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNE 205 (424)
Q Consensus 130 ~~~~~al~~----~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~ 205 (424)
.+++.++++ +++..++++.++.|+++.+++++++|||+++++ ++|++++++|++++...+... +.++.
T Consensus 76 ~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~~~~~~--~~~~~ 147 (295)
T PRK11689 76 ICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLGGDNGL--SLAEL 147 (295)
T ss_pred HHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheecCCccc--hhhhh
Confidence 888888764 577888999999999999999999999999999 999999999999987321100 00000
Q ss_pred CCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHH
Q 039506 206 DFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVI 285 (424)
Q Consensus 206 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~ 285 (424)
+ .+.+....|++++++|+++||.|.+..|+..++.+ +.... ...+.+.+.+
T Consensus 148 ~-------------------------~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~---~~~~~~~l~~ 198 (295)
T PRK11689 148 I-------------------------NNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLF---FILTALALWI 198 (295)
T ss_pred h-------------------------hccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHH---HHHHHHHHHH
Confidence 0 00012346999999999999999999999877766 34332 2223333333
Q ss_pred HHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHH
Q 039506 286 TAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGG 365 (424)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~ 365 (424)
.....+ .+ ....+...|..+++.+ +++.++|.+|++++|+.++++++.+.+++|+++++++++++||+++..+++|+
T Consensus 199 ~~~~~~-~~-~~~~~~~~~~~l~~~~-~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~ 275 (295)
T PRK11689 199 KYFLSP-QP-AMVFSLPAIIKLLLAA-AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGV 275 (295)
T ss_pred HHHHhc-Cc-cccCCHHHHHHHHHHH-HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence 333322 21 2233566787887777 47899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhheeeeecc
Q 039506 366 CLIIAGLYMVTWVSY 380 (424)
Q Consensus 366 ~lii~g~~l~~~~~~ 380 (424)
++|+.|+++....++
T Consensus 276 ~lI~~gv~~~~~~~~ 290 (295)
T PRK11689 276 AMVTAGSLLCWLATR 290 (295)
T ss_pred HHHHHhHHHHhhhHh
Confidence 999999988765443
No 5
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.97 E-value=4.3e-29 Score=241.82 Aligned_cols=276 Identities=19% Similarity=0.149 Sum_probs=223.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHH
Q 039506 48 VLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFG 127 (424)
Q Consensus 48 ~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~ 127 (424)
+.+++.+++++.++|+.++.+.|.+.++ ++|..+.++|++++.++++++...+++ +.++++++..+..|.+ ...
T Consensus 10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~~~~----~~~~~~~~~~~~~g~~-~~~ 83 (293)
T PRK10532 10 VWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKPWRL----RFAKEQRLPLLFYGVS-LGG 83 (293)
T ss_pred cchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhHHhc----cCCHHHHHHHHHHHHH-HHH
Confidence 4688999999999999999999999986 999999999999999888876532221 2356777778888887 678
Q ss_pred HHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCC
Q 039506 128 NQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDF 207 (424)
Q Consensus 128 ~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~ 207 (424)
.+.++++|++++|++.++++.++.|+++.+++. ||+. + ..++.++++|++++.. .+.. .
T Consensus 84 ~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~------~~~~~i~~~Gv~li~~-~~~~---~----- 142 (293)
T PRK10532 84 MNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--D------FVWVVLAVLGLWFLLP-LGQD---V----- 142 (293)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--H------HHHHHHHHHHHheeee-cCCC---c-----
Confidence 888999999999999999999999999998763 5543 3 5557788999988762 1110 0
Q ss_pred ccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 039506 208 VGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITA 287 (424)
Q Consensus 208 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 287 (424)
+ +....|++++++++++|+.|.+..|+..++.+ +... .+....+++++.+..
T Consensus 143 -------------------------~-~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~ 194 (293)
T PRK10532 143 -------------------------S-HVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIG 194 (293)
T ss_pred -------------------------c-cCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHH
Confidence 0 12347999999999999999999999987766 4444 455566666666665
Q ss_pred HHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHH
Q 039506 288 FFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCL 367 (424)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~l 367 (424)
...+. ....+...|..++++|++++.++|.+|++++++.++++++++.+++|+++.+++++++||+++..+++|+++
T Consensus 195 ~~~~~---~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~l 271 (293)
T PRK10532 195 ALQAG---EALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGA 271 (293)
T ss_pred HHccC---cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 54432 112245566677899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhheeeeeccc
Q 039506 368 IIAGLYMVTWVSYR 381 (424)
Q Consensus 368 ii~g~~l~~~~~~~ 381 (424)
|++|++...+..++
T Consensus 272 Il~~~~~~~~~~~~ 285 (293)
T PRK10532 272 IIAASMGSTLTIRR 285 (293)
T ss_pred HHHHHHHHHhcCCC
Confidence 99999998766544
No 6
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.97 E-value=6.1e-29 Score=236.34 Aligned_cols=259 Identities=24% Similarity=0.344 Sum_probs=220.6
Q ss_pred HHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 039506 62 YGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNP 141 (424)
Q Consensus 62 ~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~ 141 (424)
||.+++..|...+.+.|+....+.|+..+.+++.++...+ .+++++++.+..|.++..+++.+++.|++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 8999999999887668999999999999988887764432 245566778888888889999999999999999
Q ss_pred chhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCC
Q 039506 142 TYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEP 221 (424)
Q Consensus 142 ~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 221 (424)
++++++.++.|+++.+++++++|||+++++ ++|+.++++|++++.. +++.
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~~-~~~~----------------------- 123 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLLS-DGNL----------------------- 123 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhcc-CCcc-----------------------
Confidence 999999999999999999999999999999 9999999999999862 1100
Q ss_pred cccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC-cchhHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 039506 222 VGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPS-SLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLT 300 (424)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 300 (424)
+....|++++++++++|+.+.+..|+..++.+. +.....+.+..+.+.+.+..+..++.. ..+
T Consensus 124 -------------~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~ 187 (260)
T TIGR00950 124 -------------SINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP---QAL 187 (260)
T ss_pred -------------cccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC---Ccc
Confidence 133579999999999999999999998877662 234444677888877777766554221 225
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhh
Q 039506 301 QSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLY 373 (424)
Q Consensus 301 ~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~ 373 (424)
...|..+++.+++++.+++.++++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 188 SLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 6778889999999999999999999999999999999999999999999999999999999999999999863
No 7
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.97 E-value=9e-29 Score=239.88 Aligned_cols=281 Identities=14% Similarity=0.115 Sum_probs=209.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccc---CcCCHHHHHHHHHHHHH
Q 039506 47 EVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTR---LPMTRRLLMSFFFLGLT 123 (424)
Q Consensus 47 ~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~~~l~~g~l 123 (424)
++.+|++++++++++||.++++.|.. + +++|.++.++|+.++.++++++...++++.. ...+++++. ....+.+
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 81 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLAVSAV 81 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHHHHHH
Confidence 45689999999999999999999986 4 4999999999999999888877655432111 011344433 3346666
Q ss_pred HHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCC
Q 039506 124 GIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCG 203 (424)
Q Consensus 124 g~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~ 203 (424)
+...++.++++|++++++++++++.++.|+++.+++++++|||+++++ +.|++++++|++++...++
T Consensus 82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~~------- 148 (296)
T PRK15430 82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTFG------- 148 (296)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHcC-------
Confidence 688899999999999999999999999999999999999999999999 9999999999999873111
Q ss_pred CCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHHHHH
Q 039506 204 NEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFGAVL 282 (424)
Q Consensus 204 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~ 282 (424)
+. .+++++++++||.|.+..|+..++.. .......+....+.+.
T Consensus 149 --------------------------------~~---~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~ 193 (296)
T PRK15430 149 --------------------------------SL---PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIY 193 (296)
T ss_pred --------------------------------Cc---cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Confidence 10 14578899999999999988754321 1122223333333322
Q ss_pred HHHHHHHhcCCCcccccchh-HHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhh
Q 039506 283 MVITAFFLTNDSTEWSLTQS-ELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGS 361 (424)
Q Consensus 283 l~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~ 361 (424)
..+. .......+..+.. .+..++..++ .+.+++.++++++++.++++++++.+++|+++.+++++++||++++.+
T Consensus 194 ~~~~---~~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~ 269 (296)
T PRK15430 194 LFAI---ADSSTSHMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADK 269 (296)
T ss_pred HHHH---ccCCcccccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 2111 1111111111122 2333334444 678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhheeeeecccc
Q 039506 362 VLGGCLIIAGLYMVTWVSYRE 382 (424)
Q Consensus 362 ~lG~~lii~g~~l~~~~~~~~ 382 (424)
++|+++|++|+.+........
T Consensus 270 ~~G~~lI~~~~~v~~~~~~~~ 290 (296)
T PRK15430 270 MVTFAFIWVALAIFVMDAIYT 290 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888776554333
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.96 E-value=3.2e-27 Score=229.79 Aligned_cols=279 Identities=14% Similarity=0.090 Sum_probs=216.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 039506 55 MALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLL 134 (424)
Q Consensus 55 ~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~ 134 (424)
.++..++-....+..|.+.+.-..|..+++.|+.++.+...+... .+.+.+.+.++++++.++..|++ ..+++.+.+.
T Consensus 7 ~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~ 84 (302)
T TIGR00817 7 FGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIV-HTIGHVTSNV 84 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 344444445556788998875356999999999998777665521 12222335678899999999999 5888999999
Q ss_pred HhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccc
Q 039506 135 GLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVR 214 (424)
Q Consensus 135 al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~ 214 (424)
|+++++++.++++.++.|+++++++++++|||+++++ +.|++++++|+++... ++.
T Consensus 85 ~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~~--~~~---------------- 140 (302)
T TIGR00817 85 SLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALASD--TEL---------------- 140 (302)
T ss_pred HHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhcC--Ccc----------------
Confidence 9999999999999999999999999999999999999 9999999999987641 100
Q ss_pred cCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCCcchhHHHHHHHHHHHHHHHHHHhcC
Q 039506 215 VRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILR--KYPSSLSVTAYSYFFGAVLMVITAFFLTN 292 (424)
Q Consensus 215 ~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 292 (424)
+....|++++++|+++|++|.+..|+..+ +.+ +...+.++...+++.+.|.....+.
T Consensus 141 --------------------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~ 199 (302)
T TIGR00817 141 --------------------SFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEG 199 (302)
T ss_pred --------------------cccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcc
Confidence 12346999999999999999999999887 666 5889999999999988888776553
Q ss_pred CCcc---cc-----cc-hhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHH
Q 039506 293 DSTE---WS-----LT-QSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVL 363 (424)
Q Consensus 293 ~~~~---~~-----~~-~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~l 363 (424)
.+.. +. .+ ...+...+..+..+....+.++++++++.++++.++..+++|+++++++++++||+++..+++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~ 279 (302)
T TIGR00817 200 PPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVF 279 (302)
T ss_pred hHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHH
Confidence 2111 00 00 011221222332233333356678999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhheeeeecc
Q 039506 364 GGCLIIAGLYMVTWVSY 380 (424)
Q Consensus 364 G~~lii~g~~l~~~~~~ 380 (424)
|++++++|++++.+.+.
T Consensus 280 G~~lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 280 GTGIAIAGVFLYSRVKA 296 (302)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999886443
No 9
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.95 E-value=2e-25 Score=216.32 Aligned_cols=305 Identities=18% Similarity=0.213 Sum_probs=244.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhccc-ccCcCCHHHHHHHHHHHH
Q 039506 45 EREVLRAHGAMALVQLFYGGYHVITKVALNVGVN-QLVFCVFRDLLALSILAPIAYFREKR-TRLPMTRRLLMSFFFLGL 122 (424)
Q Consensus 45 ~~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~l~~g~ 122 (424)
+++.++.+++.-+.+++-+...+.+..+.+.|.+ |....++.+..-.++..++...++++ ......+++|+++++.++
T Consensus 8 ~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~ 87 (334)
T PF06027_consen 8 TRRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLAL 87 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHH
Confidence 3456778888888888888889999888876676 77888888888888877776665443 222334567788888898
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCC
Q 039506 123 TGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGC 202 (424)
Q Consensus 123 lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~ 202 (424)
+ -..++.+.+.|++|++.+.++++..+..+++++++++++|+|.++.+ ++|+++++.|++++...|.....+.
T Consensus 88 ~-Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~~~~~~ 160 (334)
T PF06027_consen 88 L-DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVLSGSDS 160 (334)
T ss_pred H-HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeecccccccC
Confidence 8 79999999999999999999999999999999999999999999999 9999999999999986554321110
Q ss_pred CCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHH
Q 039506 203 GNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVL 282 (424)
Q Consensus 203 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~ 282 (424)
+ +.++...|++++++|+++||++++..++..++.+ .....++..+++.++
T Consensus 161 ~-----------------------------~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii 210 (334)
T PF06027_consen 161 S-----------------------------SGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFII 210 (334)
T ss_pred C-----------------------------CCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHH
Confidence 0 1135679999999999999999999999999887 577888888888888
Q ss_pred HHHHHHHhcCCC-cccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhh
Q 039506 283 MVITAFFLTNDS-TEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGS 361 (424)
Q Consensus 283 l~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~ 361 (424)
..+.....+... ...+.+...+..++. ..++.+.-|.+....++..+|+..++-..+..+++++++++++|+++++..
T Consensus 211 ~~iq~~ile~~~i~~~~w~~~~~~~~v~-~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly 289 (334)
T PF06027_consen 211 SGIQLAILERSGIESIHWTSQVIGLLVG-YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY 289 (334)
T ss_pred HHHHHHheehhhhhccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH
Confidence 888777665432 122223444443333 344667778888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhheeeeecccccCCCC
Q 039506 362 VLGGCLIIAGLYMVTWVSYRERQAPP 387 (424)
Q Consensus 362 ~lG~~lii~g~~l~~~~~~~~~~~~~ 387 (424)
++|.++|++|.+++...+.+.+++.+
T Consensus 290 ~~af~lIiiG~vvy~~~~~~~~~~~~ 315 (334)
T PF06027_consen 290 ILAFALIIIGFVVYNLAESPEEEARR 315 (334)
T ss_pred HHHHHHHHHHhheEEccCCcccccch
Confidence 99999999999999987665544433
No 10
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.95 E-value=9.2e-26 Score=217.28 Aligned_cols=274 Identities=14% Similarity=0.153 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcc-cccCcCCHHHHHHHHHHHHHHHHHHHH
Q 039506 52 HGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREK-RTRLPMTRRLLMSFFFLGLTGIFGNQL 130 (424)
Q Consensus 52 ~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~l~~g~lg~~~~~~ 130 (424)
+.+.++++++|+...+.+|...++ -++ ..++++....+++.++...+.. +.+++.+++. +..+..+.++...++.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATF-WLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhh-HHHHHHHHHHHHHHHH
Confidence 567889999999999999976654 334 3477777777778777665422 2222323444 4455555555789999
Q ss_pred HHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccc
Q 039506 131 LFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGE 210 (424)
Q Consensus 131 ~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~ 210 (424)
+++.|+++.+++.++++.++.|+++.+++++++|||+++++ ++|+.+++.|+.++... +..
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~~-~~~------------ 139 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGLS-RFA------------ 139 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhcc-ccc------------
Confidence 99999999999999999999999999999999999999999 99999999999988631 100
Q ss_pred cccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchh---HHHHHHHHHHHHHHHH
Q 039506 211 NEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSV---TAYSYFFGAVLMVITA 287 (424)
Q Consensus 211 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~---~~~~~~~~~~~l~~~~ 287 (424)
.....|+.++++++++|++|.+..|+..++.++.... ..+......+.+.+..
T Consensus 140 ------------------------~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (281)
T TIGR03340 140 ------------------------QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLY 195 (281)
T ss_pred ------------------------ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHH
Confidence 0113577889999999999999988875554421111 1222222211112211
Q ss_pred HHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHH
Q 039506 288 FFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCL 367 (424)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~l 367 (424)
...+.. ....+...+..+++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++
T Consensus 196 ~~~~~~--~~~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~l 273 (281)
T TIGR03340 196 LKRHGR--SMFPYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCI 273 (281)
T ss_pred HHHhcc--chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 111211 111233456677888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhe
Q 039506 368 IIAGLYM 374 (424)
Q Consensus 368 ii~g~~l 374 (424)
+++|+++
T Consensus 274 il~Gv~l 280 (281)
T TIGR03340 274 IVAGLVV 280 (281)
T ss_pred HHHhHHh
Confidence 9999875
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.95 E-value=4.8e-25 Score=218.25 Aligned_cols=283 Identities=16% Similarity=0.168 Sum_probs=221.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhcccccCcC--CHHHHHHHHHHHHHH
Q 039506 48 VLRAHGAMALVQLFYGGYHVITKVALNVGVN-QLVFCVFRDLLALSILAPIAYFREKRTRLPM--TRRLLMSFFFLGLTG 124 (424)
Q Consensus 48 ~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~l~~g~lg 124 (424)
+.+...+.+....+-.......|.+.+. ++ |..++++|++++.++..++.....++ +++. .+++++..+..|+++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~llp~gl~~ 124 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGFRK-IPRIKSLKLFLKNFLPQGLCH 124 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCCCC-CCCCCCHHHHHHHHHHHHHHH
Confidence 4566667777777777888899999986 99 99999999999987765554332221 2222 355788899999996
Q ss_pred HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCC
Q 039506 125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGN 204 (424)
Q Consensus 125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~ 204 (424)
... +...+.|+++++++.++++..+.|+++++++++++|||+++++ +.+++++++|+++... ++
T Consensus 125 ~~~-~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~--~~------- 188 (350)
T PTZ00343 125 LFV-HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASV--KE------- 188 (350)
T ss_pred HHH-HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheec--cc-------
Confidence 554 5557799999999999999999999999999999999999999 9999999999999872 11
Q ss_pred CCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC------CcchhHHHHHHH
Q 039506 205 EDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYP------SSLSVTAYSYFF 278 (424)
Q Consensus 205 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~------~~~~~~~~~~~~ 278 (424)
.+....|++++++|+++|+++.+..|+..++.+ ++.....+....
T Consensus 189 -----------------------------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (350)
T PTZ00343 189 -----------------------------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLI 239 (350)
T ss_pred -----------------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHH
Confidence 013357999999999999999999999887543 133455556788
Q ss_pred HHHHHHHHHHHhcCCC--ccc-----ccchhHHHHHHHHHHHHHHHHHHHHHH----HhhccChhhHhhhcchhHHHHHH
Q 039506 279 GAVLMVITAFFLTNDS--TEW-----SLTQSELFAVIYAGIIASAVNYGLITW----SNKILGPALVALYNPLQPAASAF 347 (424)
Q Consensus 279 ~~~~l~~~~~~~~~~~--~~~-----~~~~~~~~~l~~~g~~~~~~~~~l~~~----a~~~~~~~~~s~~~~~~pi~~~l 347 (424)
+.++++|+....+... ..+ ..+...+..+++ .++.+.+.+.+++. +++++++.+.++..+++|+++++
T Consensus 240 ~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv 318 (350)
T PTZ00343 240 ASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIV 318 (350)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhh
Confidence 8888888877554211 111 001112233334 34557888888885 99999999999999999999999
Q ss_pred HHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506 348 LSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV 378 (424)
Q Consensus 348 ~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~ 378 (424)
++++++||++++.+++|++++++|++++++.
T Consensus 319 ~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 319 SSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred hhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999988754
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.93 E-value=5.8e-24 Score=201.98 Aligned_cols=248 Identities=12% Similarity=0.108 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccc-----cCcCCHH-HHHHHHHHHHH
Q 039506 50 RAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRT-----RLPMTRR-LLMSFFFLGLT 123 (424)
Q Consensus 50 ~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~-~~~~~l~~g~l 123 (424)
+|+.++++++++||.+.++.|.+ . +++|.+++++|++++.+++.++...++++. .+..+++ ++......|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-K-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-c-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 47889999999999999999984 4 499999999999999988877664433211 1111222 23445666766
Q ss_pred HHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCC
Q 039506 124 GIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCG 203 (424)
Q Consensus 124 g~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~ 203 (424)
..+++.+++.|++++++++++++.++.|+++++++++++|||+++++ +++++++++|++++...++
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~~------- 145 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLKG------- 145 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHcC-------
Confidence 78999999999999999999999999999999999999999999999 9999999999998862110
Q ss_pred CCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHH
Q 039506 204 NEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLM 283 (424)
Q Consensus 204 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l 283 (424)
+.. +++++++++|+.|.+..|+..++ +. ...... .....+..
T Consensus 146 --------------------------------~~~---~~~l~aa~~~a~~~i~~~~~~~~-~~-~~~~~~-~~~~~~~~ 187 (256)
T TIGR00688 146 --------------------------------SLP---WEALVLAFSFTAYGLIRKALKNT-DL-AGFCLE-TLSLMPVA 187 (256)
T ss_pred --------------------------------Cch---HHHHHHHHHHHHHHHHHhhcCCC-Cc-chHHHH-HHHHHHHH
Confidence 111 35788999999999999997543 31 222221 12222222
Q ss_pred HHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHH
Q 039506 284 VITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIF 352 (424)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~ 352 (424)
.+.....+........+...|..+++.|++ +.++|.++++++|+.++++++++.+++|+++.+++.++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 188 IYYLLQTDFATVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHhccCcccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 222111111111111123478888888875 88999999999999999999999999999999999764
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.92 E-value=2e-22 Score=193.66 Aligned_cols=282 Identities=26% Similarity=0.437 Sum_probs=219.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHH
Q 039506 47 EVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIF 126 (424)
Q Consensus 47 ~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~ 126 (424)
+...+..+.++..+.|+......|...+...++....+.|...+.++..+....++...+ + ..+.++...+.+.++..
T Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 81 (292)
T COG0697 4 ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLR-P-ALRPWLLLLLLALLGLA 81 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhccccc-c-cccchHHHHHHHHHHHH
Confidence 445677888888899999999999988754677777777999988884433332211111 1 12224456666777789
Q ss_pred HHHHHHHHHhhccCcchhhhcccchHHHHHHHHH-HHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCC
Q 039506 127 GNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAV-MMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNE 205 (424)
Q Consensus 127 ~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~-l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~ 205 (424)
.++.+++.++++++++.++++.++.|+++.++++ +++|||+++.+ +.++++.+.|++++...+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~~~~~~------- 148 (292)
T COG0697 82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILLGGGGG------- 148 (292)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheecCCCcc-------
Confidence 9999999999999999999999999999999997 77799999999 999999999999998321110
Q ss_pred CCccccccccCCCCCCcccccccccccCchh-hHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHH-HHHHHHHHHH
Q 039506 206 DFVGENEVRVRGQPEPVGWLLSNFIDIGLDQ-WHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTA-YSYFFGAVLM 283 (424)
Q Consensus 206 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~-~~~~~~~~~l 283 (424)
.. ...|++++++++++++++.+..|+.. +.+ +..... +... ....
T Consensus 149 -----------------------------~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~--~~~~ 195 (292)
T COG0697 149 -----------------------------GILSLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLL--LALL 195 (292)
T ss_pred -----------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHH--HHHH
Confidence 01 46899999999999999999999987 444 344444 3333 1122
Q ss_pred HHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHH
Q 039506 284 VITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVL 363 (424)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~l 363 (424)
.......... . .+.+...+..+.+.|++++.+++.++++++++.++...+.+.+++|+++.+++++++||+++..+++
T Consensus 196 ~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~ 273 (292)
T COG0697 196 LLLLFFLSGF-G-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLL 273 (292)
T ss_pred HHHHHHhccc-c-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHH
Confidence 2222211111 1 3335678899999999988899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhheeeee
Q 039506 364 GGCLIIAGLYMVTWV 378 (424)
Q Consensus 364 G~~lii~g~~l~~~~ 378 (424)
|+.++++|+++...+
T Consensus 274 G~~li~~g~~l~~~~ 288 (292)
T COG0697 274 GAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999988765
No 14
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.91 E-value=1e-25 Score=204.02 Aligned_cols=294 Identities=20% Similarity=0.236 Sum_probs=233.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHH
Q 039506 47 EVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIF 126 (424)
Q Consensus 47 ~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~ 126 (424)
+..++..+..++.++-..+.+..|.+ + .+|.+..-.|++..+++..|..+.+++....+...| +++++.|.+| .
T Consensus 35 ~p~~gl~l~~vs~ff~~~~vv~t~~~-e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R--~~LiLRg~mG-~ 108 (346)
T KOG4510|consen 35 KPNLGLLLLTVSYFFNSCMVVSTKVL-E--NDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKR--KWLILRGFMG-F 108 (346)
T ss_pred CCccCceehhhHHHHhhHHHhhhhhh-c--cChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcE--EEEEeehhhh-h
Confidence 44567777777766666666666655 3 689999999988888887776666555432222222 4577888887 4
Q ss_pred HHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCC
Q 039506 127 GNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNED 206 (424)
Q Consensus 127 ~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~ 206 (424)
.+..+.|+|++|.+.+++++|.++.|+++++++|+++|||.++.+ ..+..+.+.|+++++ +++.+++...+.
T Consensus 109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIv--RPpFlFG~~t~g 180 (346)
T KOG4510|consen 109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIV--RPPFLFGDTTEG 180 (346)
T ss_pred hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEe--cCCcccCCCccc
Confidence 455566789999999999999999999999999999999999999 999999999999997 677766654332
Q ss_pred CccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHH
Q 039506 207 FVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVIT 286 (424)
Q Consensus 207 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~ 286 (424)
.++ + ..+..++|...++.++++.|...++.|+..|+.+. ...+.|..+++.+..++.
T Consensus 181 ~~~---------s-------------~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~-~msvsyf~~i~lV~s~I~ 237 (346)
T KOG4510|consen 181 EDS---------S-------------QVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHA-IMSVSYFSLITLVVSLIG 237 (346)
T ss_pred ccc---------c-------------cccccCCchHHHHHhHhhhhhHHHHHHHhhccccE-EEEehHHHHHHHHHHHHH
Confidence 110 0 11245677889999999999999999999999984 677777777777776665
Q ss_pred HHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHH
Q 039506 287 AFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGC 366 (424)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~ 366 (424)
....+ ...++..+++|+..+.+|++ +++++.+.+.++++..+..++++.++..+++.++++++||+.||++.|.|++
T Consensus 238 ~~~ig--~~~lP~cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~ 314 (346)
T KOG4510|consen 238 CASIG--AVQLPHCGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAV 314 (346)
T ss_pred Hhhcc--ceecCccccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhcee
Confidence 55443 23455578899999999986 7889999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhheeeeecc
Q 039506 367 LIIAGLYMVTWVSY 380 (424)
Q Consensus 367 lii~g~~l~~~~~~ 380 (424)
+++.+.+.....+.
T Consensus 315 ~vvsS~v~~a~~kw 328 (346)
T KOG4510|consen 315 MVVSSTVWVALKKW 328 (346)
T ss_pred eeehhHHHHHHHHH
Confidence 99999887765443
No 15
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.90 E-value=1.5e-21 Score=180.83 Aligned_cols=279 Identities=14% Similarity=0.161 Sum_probs=227.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccc---CcCCHHHHHHHHHHHHHH
Q 039506 48 VLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTR---LPMTRRLLMSFFFLGLTG 124 (424)
Q Consensus 48 ~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~~~l~~g~lg 124 (424)
..+|+++.+.+.++||..+...|.+.. +++.++...|.+.+..+++.+....+++.. ...+++.+....+.+++
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~~--~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l- 81 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLEP--LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL- 81 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-
Confidence 447999999999999999999999854 899999999999999988887766555321 12356677777888888
Q ss_pred HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCC
Q 039506 125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGN 204 (424)
Q Consensus 125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~ 204 (424)
...++..|.+|.++..+-++++-++..|++.++++++|+|||+++.| +++++++.+||....+..|+.
T Consensus 82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q------~iAV~lA~~GV~~~~~~~g~l------ 149 (293)
T COG2962 82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQ------WIAVGLAAAGVLIQTWLLGSL------ 149 (293)
T ss_pred HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHcCCC------
Confidence 89999999999999999999999999999999999999999999999 999999999999998643321
Q ss_pred CCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHH
Q 039506 205 EDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMV 284 (424)
Q Consensus 205 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~ 284 (424)
. ..++.=+++|+.|....|+. +.+ +.+-...-++.-.+..+
T Consensus 150 -------------------------------p-----wval~la~sf~~Ygl~RK~~--~v~-a~~g~~lE~l~l~p~al 190 (293)
T COG2962 150 -------------------------------P-----WVALALALSFGLYGLLRKKL--KVD-ALTGLTLETLLLLPVAL 190 (293)
T ss_pred -------------------------------c-----HHHHHHHHHHHHHHHHHHhc--CCc-hHHhHHHHHHHHhHHHH
Confidence 1 23456689999999876665 444 35555666666666655
Q ss_pred HHHHHhcCCCcccc-cchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHH
Q 039506 285 ITAFFLTNDSTEWS-LTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVL 363 (424)
Q Consensus 285 ~~~~~~~~~~~~~~-~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~l 363 (424)
...+..+...+... .+...+..++..|. .++++..++..+.|+++-+..+.++|.+|..-.+++++++||+++..+++
T Consensus 191 ~yl~~l~~~~~~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~ 269 (293)
T COG2962 191 IYLLFLADSGQFLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLV 269 (293)
T ss_pred HHHHHHhcCchhhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHH
Confidence 55555553332122 24566677777777 58999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhheeeeeccc
Q 039506 364 GGCLIIAGLYMVTWVSYR 381 (424)
Q Consensus 364 G~~lii~g~~l~~~~~~~ 381 (424)
..+.|.+|.+++....-+
T Consensus 270 ~F~~IW~aL~l~~~d~l~ 287 (293)
T COG2962 270 TFAFIWLALALFSIDGLY 287 (293)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999998866543
No 16
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.89 E-value=8.4e-21 Score=171.25 Aligned_cols=275 Identities=20% Similarity=0.176 Sum_probs=226.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHH
Q 039506 51 AHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQL 130 (424)
Q Consensus 51 ~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~ 130 (424)
.+.+++.+...--....+.|.++.. +++...+.+|..++.++++++..-++ .+..++++...+..|+. ....+.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RPwr----~r~~~~~~~~~~~yGvs-Lg~MNl 86 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRPWR----RRLSKPQRLALLAYGVS-LGGMNL 86 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhHHH----hccChhhhHHHHHHHHH-HHHHHH
Confidence 5667777777777777889999986 99999999999999999988754333 24568888899999998 899999
Q ss_pred HHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccc
Q 039506 131 LFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGE 210 (424)
Q Consensus 131 ~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~ 210 (424)
+||.+++.+|.+.+..+-++-|+.+++++. +| .++ .+.+.+++.|+.++.. .++. .
T Consensus 87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr--~~d------~vwvaLAvlGi~lL~p-~~~~-----~------ 142 (292)
T COG5006 87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS----RR--LRD------FVWVALAVLGIWLLLP-LGQS-----V------ 142 (292)
T ss_pred HHHHHHHhccchhhhhhhhccHHHHHHHhc----cc--hhh------HHHHHHHHHHHHhhee-ccCC-----c------
Confidence 999999999999999999999999987654 33 223 7778889999998872 1110 0
Q ss_pred cccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHh
Q 039506 211 NEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFL 290 (424)
Q Consensus 211 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 290 (424)
. +....|..+++.++.||++|++..||..+..+. -.-+...+.++.++.+|+....
T Consensus 143 -------~----------------~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g-~~g~a~gm~vAaviv~Pig~~~ 198 (292)
T COG5006 143 -------W----------------SLDPVGVALALGAGACWALYIVLGQRAGRAEHG-TAGVAVGMLVAALIVLPIGAAQ 198 (292)
T ss_pred -------C----------------cCCHHHHHHHHHHhHHHHHHHHHcchhcccCCC-chHHHHHHHHHHHHHhhhhhhh
Confidence 0 145689999999999999999999999876563 5778888888998888887754
Q ss_pred cCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHH
Q 039506 291 TNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIA 370 (424)
Q Consensus 291 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~ 370 (424)
.. +. -+++......+..+++++.+.|.+-..++++.+....+.+.++||.++.+.+++++||++|..||+|+.+|+.
T Consensus 199 ag-~~--l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~Via 275 (292)
T COG5006 199 AG-PA--LFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIA 275 (292)
T ss_pred cc-hh--hcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 31 11 1246667777889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhheeeeecccc
Q 039506 371 GLYMVTWVSYRE 382 (424)
Q Consensus 371 g~~l~~~~~~~~ 382 (424)
+..-.++..+|+
T Consensus 276 AsaG~~lt~~~~ 287 (292)
T COG5006 276 ASAGSTLTARKP 287 (292)
T ss_pred HHhccccccCCC
Confidence 998776654443
No 17
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.84 E-value=5.1e-19 Score=170.87 Aligned_cols=278 Identities=14% Similarity=0.106 Sum_probs=205.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHH
Q 039506 51 AHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQL 130 (424)
Q Consensus 51 ~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~ 130 (424)
++++.++++++||...+..|... +.++.++. |..++.+++..+....+++. ...++.+...++.|.+ ...++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~-w~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAF-WALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHH-HHhhhh
Confidence 46788999999999999999875 57787764 77777777766555543211 2235555556666666 888999
Q ss_pred HHHHHhhccCcchhhhccc-chHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCcc
Q 039506 131 LFLLGLSYTNPTYAAAIQP-SIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVG 209 (424)
Q Consensus 131 ~~~~al~~~~~~~a~ii~~-l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~ 209 (424)
+++.|.++++.+.+..+.. +.+++..+.+.+++|||.++++ ...-++|++++++|++++...+++.. + +
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~--~~~~~~g~~l~l~G~~l~~~~~~~~~---~-~---- 144 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQ--TLLGLLALILIIIGVYLTSRSKDKSA---G-I---- 144 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHH--HHHHHHHHHHHHHhHheEEecccccc---c-c----
Confidence 9999999999999999987 9999999999999999987653 11127889999999888863221100 0 0
Q ss_pred ccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHH---HHHHHHHHH
Q 039506 210 ENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYF---FGAVLMVIT 286 (424)
Q Consensus 210 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~---~~~~~l~~~ 286 (424)
++ ..+...|.+++++|+++|+.|.+..|.. +.+ |....+.+.. .+..+..+.
T Consensus 145 --------~~--------------~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~ 199 (290)
T TIGR00776 145 --------KS--------------EFNFKKGILLLLMSTIGYLVYVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLG 199 (290)
T ss_pred --------cc--------------ccchhhHHHHHHHHHHHHHHHHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHH
Confidence 00 0133579999999999999999999986 355 5677444443 333322222
Q ss_pred HHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhh-ccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhH---
Q 039506 287 AFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNK-ILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSV--- 362 (424)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~-~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~--- 362 (424)
. . ...++. +...+.. +..|++ ..+++.+|..+.+ +.++++++.+.+.+|+.+.+++++++||+.++.++
T Consensus 200 ~--~--~~~~~~-~~~~~~~-~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~ 272 (290)
T TIGR00776 200 H--I--LAKPLK-KYAILLN-ILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAI 272 (290)
T ss_pred H--h--cccchH-HHHHHHH-HHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehh
Confidence 1 1 111221 2333444 447887 7999999999999 99999999999999999999999999999999999
Q ss_pred -HHHHHHHHhhheeee
Q 039506 363 -LGGCLIIAGLYMVTW 377 (424)
Q Consensus 363 -lG~~lii~g~~l~~~ 377 (424)
+|+++++.|+++...
T Consensus 273 ~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 273 SVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 999999999987643
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.82 E-value=9.8e-18 Score=163.16 Aligned_cols=265 Identities=16% Similarity=0.199 Sum_probs=211.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHH
Q 039506 79 QLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLL 158 (424)
Q Consensus 79 ~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~ll 158 (424)
|..+++.++....++..+.....+++ ..++..++.++..+++ ..++..+-+.|++|+|.+...++..+.|+.++++
T Consensus 32 ~~~lt~~q~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~ 107 (303)
T PF08449_consen 32 PLFLTFVQFAFNALFSFILLSLFKFP---KSRKIPLKKYAILSFL-FFLASVLSNAALKYISYPTQIVFKSSKPIPVMIL 107 (303)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcccc---CCCcChHHHHHHHHHH-HHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHH
Confidence 88999999999988887766655421 2234445667777888 7899999999999999999999999999999999
Q ss_pred HHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCcccccccccccCchhhH
Q 039506 159 AVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWH 238 (424)
Q Consensus 159 a~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 238 (424)
+.+++|+|.+.++ +.++++..+|+.+....+.....+..+ ....+.
T Consensus 108 ~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~~~~~~----------------------------~~~~~~ 153 (303)
T PF08449_consen 108 GVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSSSSSNS----------------------------SSFSSA 153 (303)
T ss_pred HHHhcCccccHHH------HHHHHHHHhhHheeeeccccccccccc----------------------------ccccch
Confidence 9999999999999 999999999999998644432111110 001334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHHHHHHHHHHHH--hcCCCccccc---chhHHHHHHHHHH
Q 039506 239 LGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFGAVLMVITAFF--LTNDSTEWSL---TQSELFAVIYAGI 312 (424)
Q Consensus 239 ~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~---~~~~~~~l~~~g~ 312 (424)
.|+++.+++.++.+...+..++..++++ ++...+++....+.+...+.... .++....++. .+..+..++...
T Consensus 154 ~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s- 232 (303)
T PF08449_consen 154 LGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS- 232 (303)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH-
Confidence 5999999999999999999999988766 45788999999999888877776 3322222221 233444444444
Q ss_pred HHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeecccc
Q 039506 313 IASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRE 382 (424)
Q Consensus 313 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~~~ 382 (424)
+++.+++.+.+..+++.++...+++..+..+++++++++++|+++++.+|+|.++++.|..+..+.++|+
T Consensus 233 ~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 233 LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 4677788888899999999999999999999999999999999999999999999999999988766554
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.75 E-value=7.4e-17 Score=153.46 Aligned_cols=298 Identities=15% Similarity=0.189 Sum_probs=225.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--ChHHHHHHHHHHHHHHHHHHH----Hh---hcc--ccc--------
Q 039506 46 REVLRAHGAMALVQLFYGGYHVITKVALNVGV--NQLVFCVFRDLLALSILAPIA----YF---REK--RTR-------- 106 (424)
Q Consensus 46 ~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~--~~~~~~~~r~~~~~l~l~~~~----~~---~~~--~~~-------- 106 (424)
.+...|+.+.++...+|-.+.-+++...+.+- .|+.+++.....-.+.+.++. .+ .+| +..
T Consensus 10 ~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d 89 (416)
T KOG2765|consen 10 WRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEAD 89 (416)
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhh
Confidence 45678999999999999999999999886433 488777666555444444422 11 111 000
Q ss_pred --------------------------------------------------CcCCH------------HHHHHHHHHHHHH
Q 039506 107 --------------------------------------------------LPMTR------------RLLMSFFFLGLTG 124 (424)
Q Consensus 107 --------------------------------------------------~~~~~------------~~~~~~l~~g~lg 124 (424)
....+ +..+..+..+.+
T Consensus 90 ~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~l- 168 (416)
T KOG2765|consen 90 AEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPL- 168 (416)
T ss_pred hhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHH-
Confidence 00011 233445666777
Q ss_pred HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCC
Q 039506 125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGN 204 (424)
Q Consensus 125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~ 204 (424)
.+++++.++.|+.+++++..+++..+.-+|+..++.++..||++..+ .+++++++.|+++++.++.....+
T Consensus 169 WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sK------llav~~si~GViiVt~~~s~~~~~--- 239 (416)
T KOG2765|consen 169 WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSK------LLAVFVSIAGVIIVTMGDSKQNSD--- 239 (416)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHH------HHHHHHhhccEEEEEecccccccc---
Confidence 78899999999999999999999999999999999999999999999 999999999999998644432100
Q ss_pred CCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcch---hHHHHHHHHHH
Q 039506 205 EDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLS---VTAYSYFFGAV 281 (424)
Q Consensus 205 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~---~~~~~~~~~~~ 281 (424)
. ...+...|+++++++++.||.|.+..|+...+.+..+. ..++..++..+
T Consensus 240 -------------~--------------~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnll 292 (416)
T KOG2765|consen 240 -------------L--------------PASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLL 292 (416)
T ss_pred -------------C--------------CccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHH
Confidence 1 11366899999999999999999999998777631222 34444455556
Q ss_pred HHHHHHHHhcC-CCccccc-chhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcch
Q 039506 282 LMVITAFFLTN-DSTEWSL-TQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYL 359 (424)
Q Consensus 282 ~l~~~~~~~~~-~~~~~~~-~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~ 359 (424)
++.|..++.+. ....++. +......++..++++++++=.+|.+|.-..++..+.+-..++.+.+++.+.++-+..+++
T Consensus 293 llwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~ 372 (416)
T KOG2765|consen 293 LLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSA 372 (416)
T ss_pred HHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCH
Confidence 66655554321 1122232 345566677788889999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhheeeeecc
Q 039506 360 GSVLGGCLIIAGLYMVTWVSY 380 (424)
Q Consensus 360 ~~~lG~~lii~g~~l~~~~~~ 380 (424)
.+++|.+.|++|.+.+++...
T Consensus 373 ~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 373 LYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred HHHHHHHHHHHHHhheecccc
Confidence 999999999999999987544
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.70 E-value=7.2e-17 Score=154.88 Aligned_cols=284 Identities=14% Similarity=0.184 Sum_probs=221.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-CCC-hHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHH
Q 039506 52 HGAMALVQLFYGGYHVITKVALNV-GVN-QLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQ 129 (424)
Q Consensus 52 ~~~~l~a~~~~~~~~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~ 129 (424)
..+......+-.......|...+. +.+ |..++.++...+.+.++.....+..+..+...+..+...+..|++ ..++.
T Consensus 19 ~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~-~~~~~ 97 (316)
T KOG1441|consen 19 GIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLV-FCISH 97 (316)
T ss_pred HHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHH-HHHHH
Confidence 333444444444556667777762 233 778888888888777777665554433333355678888999999 89999
Q ss_pred HHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCcc
Q 039506 130 LLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVG 209 (424)
Q Consensus 130 ~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~ 209 (424)
++-+.++++.+++.++.+..++|.++.++++++.+|+.+... +..+...+.|+.+.+..+.
T Consensus 98 v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~~e~------------- 158 (316)
T KOG1441|consen 98 VLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASVTEL------------- 158 (316)
T ss_pred HhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeeeccc-------------
Confidence 999999999999999999999999999999999999999999 9999999999999984211
Q ss_pred ccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh--cCC-CcchhHHHHHHHHHHHHH-H
Q 039506 210 ENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILR--KYP-SSLSVTAYSYFFGAVLMV-I 285 (424)
Q Consensus 210 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~--~~~-~~~~~~~~~~~~~~~~l~-~ 285 (424)
+....|.+.++.+.++.+...+..|+..+ +.+ +++....++...+...++ |
T Consensus 159 -------------------------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P 213 (316)
T KOG1441|consen 159 -------------------------SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIP 213 (316)
T ss_pred -------------------------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcc
Confidence 14468999999999999999999999985 222 468899999999998888 6
Q ss_pred HHHHhcCCCc------ccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcch
Q 039506 286 TAFFLTNDST------EWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYL 359 (424)
Q Consensus 286 ~~~~~~~~~~------~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~ 359 (424)
.....++... .|. .. ...+++.. ++...-....+..+.+++|.+.++.+.+.-++.++.++++|+++.|+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~ 289 (316)
T KOG1441|consen 214 FLDYVEGNKFVGFLTAPWF--VT-FLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTF 289 (316)
T ss_pred hHhhhcccceeeeeccccc--hh-hHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCch
Confidence 6665544322 222 22 33333333 34555566688899999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhheeeeecccccC
Q 039506 360 GSVLGGCLIIAGLYMVTWVSYRERQ 384 (424)
Q Consensus 360 ~~~lG~~lii~g~~l~~~~~~~~~~ 384 (424)
.+.+|+++.++|++++.+.+.++++
T Consensus 290 ~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 290 LNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999999999887665554
No 21
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.60 E-value=5.7e-16 Score=140.07 Aligned_cols=290 Identities=16% Similarity=0.185 Sum_probs=211.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHH
Q 039506 46 REVLRAHGAMALVQLFYGGYHVITKVALNVGVN-QLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTG 124 (424)
Q Consensus 46 ~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg 124 (424)
++.++++.+.-.-.++-......+..+.+.+++ |...+|+.+..-+++..+++.+|++- -+..|..+++.++.
T Consensus 14 kk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~-----~~~~~~hYilla~~- 87 (336)
T KOG2766|consen 14 KKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKY-----IKAKWRHYILLAFV- 87 (336)
T ss_pred hhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHH-----HHHHHHHhhheeEE-
Confidence 455566555555555544445555555544454 77889999999999999998887531 23334457788887
Q ss_pred HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCC
Q 039506 125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGN 204 (424)
Q Consensus 125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~ 204 (424)
-.-++++...|.||++...+.++-.-....+.+++|+|+|-|.+..+ +.|+++|+.|+++++..|-.. ++
T Consensus 88 DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmk------i~gV~iCi~GvvmvV~sDV~a----gd 157 (336)
T KOG2766|consen 88 DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMK------ISGVVICIVGVVMVVFSDVHA----GD 157 (336)
T ss_pred eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhhe------eeeEEeEecceEEEEEeeecc----cc
Confidence 57777888999999999999999888888889999999999999999 999999999999998644321 11
Q ss_pred CCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHH
Q 039506 205 EDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMV 284 (424)
Q Consensus 205 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~ 284 (424)
+- |.++...|+.++++++-+||..++....+.++.| ....+....++++++..
T Consensus 158 -------------~a-------------ggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d-~~elm~~lgLfGaIIsa 210 (336)
T KOG2766|consen 158 -------------RA-------------GGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNAD-RVELMGFLGLFGAIISA 210 (336)
T ss_pred -------------cc-------------CCCCCccCcEEEEecceeeeeccccHHHHHhcCc-HHHHHHHHHHHHHHHHH
Confidence 11 2346679999999999999999999999999988 58889999999999988
Q ss_pred HHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHH
Q 039506 285 ITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLG 364 (424)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG 364 (424)
+-..+...+......+.+....+ ...++.+.-|.+....+|.-+++...+-..+.-.++++. -.||-+.++...+.
T Consensus 211 IQ~i~~~~~~~tl~w~~~i~~yl--~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~la 286 (336)
T KOG2766|consen 211 IQFIFERHHVSTLHWDSAIFLYL--RFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLA 286 (336)
T ss_pred HHHhhhccceeeEeehHHHHHHH--HHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHH
Confidence 87443321111111122211111 133344555555556678888888877777777777777 56888899999999
Q ss_pred HHHHHHhhheeeeecccc
Q 039506 365 GCLIIAGLYMVTWVSYRE 382 (424)
Q Consensus 365 ~~lii~g~~l~~~~~~~~ 382 (424)
.+.+..|.+++..+++.+
T Consensus 287 F~~i~~GliiYs~re~~~ 304 (336)
T KOG2766|consen 287 FATIATGLIIYSTREKDE 304 (336)
T ss_pred HHHHHHhhEEeeccccCc
Confidence 999999999986554433
No 22
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.60 E-value=4.4e-13 Score=126.30 Aligned_cols=291 Identities=14% Similarity=0.184 Sum_probs=225.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc-CCC-hHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHH
Q 039506 49 LRAHGAMALVQLFYGGYHVITKVALNV-GVN-QLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIF 126 (424)
Q Consensus 49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~ 126 (424)
...+...+..++.-....+..|..... +.| ......++++.+.+.+...-..+--+ .++.+++..+.++...++ ..
T Consensus 11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~-~~~l~~~~~kk~~P~~~l-f~ 88 (314)
T KOG1444|consen 11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVN-FRPLDLRTAKKWFPVSLL-FV 88 (314)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceee-cCCcChHHHHHHccHHHH-HH
Confidence 344556666666666778888988753 233 23333588888877666554333222 346688888899999999 88
Q ss_pred HHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCC
Q 039506 127 GNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNED 206 (424)
Q Consensus 127 ~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~ 206 (424)
++...-..+++|.++...+++....|+++++....++|.|++..- +.++...++|.......+-
T Consensus 89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~~d~---------- 152 (314)
T KOG1444|consen 89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAFTDL---------- 152 (314)
T ss_pred HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhccccc----------
Confidence 999999999999999999999999999999999999999999888 9999999999887763211
Q ss_pred CccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHHHHHHHH
Q 039506 207 FVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFGAVLMVI 285 (424)
Q Consensus 207 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~l~~ 285 (424)
.....|+.+++...+.-+.+.+..|+..+..+ +.+..++|..+.+.+.+..
T Consensus 153 ----------------------------sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~ 204 (314)
T KOG1444|consen 153 ----------------------------SFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLI 204 (314)
T ss_pred ----------------------------eecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHH
Confidence 12335899999999999999999999877544 3578899999999999888
Q ss_pred HHHHhcCCCccccc------chhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcch
Q 039506 286 TAFFLTNDSTEWSL------TQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYL 359 (424)
Q Consensus 286 ~~~~~~~~~~~~~~------~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~ 359 (424)
...++++.. .... ....+..+...++++.++.|. -.++.+..++...++++..+...+.+...+++|++.++
T Consensus 205 ~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~-s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~ 282 (314)
T KOG1444|consen 205 LSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYT-SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTF 282 (314)
T ss_pred HHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHH-HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceech
Confidence 888776422 1111 245566777777766565554 88999999999999999888888888887788889999
Q ss_pred hhHHHHHHHHHhhheeeeecccccCCCC
Q 039506 360 GSVLGGCLIIAGLYMVTWVSYRERQAPP 387 (424)
Q Consensus 360 ~~~lG~~lii~g~~l~~~~~~~~~~~~~ 387 (424)
...+|..+-++|.+++++.+.++++.++
T Consensus 283 ~n~~gll~~~~ggv~Y~~~~~~~k~~~~ 310 (314)
T KOG1444|consen 283 LNVIGLLVGFFGGVLYSYATFRKKKQPP 310 (314)
T ss_pred hhhHHHHHHhhhhhHHhhhhhhhccCCC
Confidence 9999999999999999987766555443
No 23
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.60 E-value=3.3e-14 Score=127.22 Aligned_cols=254 Identities=14% Similarity=0.150 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHH
Q 039506 81 VFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAV 160 (424)
Q Consensus 81 ~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~ 160 (424)
.++++++....++.-++..++++.. .++..-+.+...++- +.+.++.-+.|++++|-....+-.++-|+=+++++.
T Consensus 55 aLVf~qC~~N~vfAkvl~~ir~~~~---~D~t~~~~YaAcs~s-YLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGV 130 (337)
T KOG1580|consen 55 ALVFFQCTANTVFAKVLFLIRKKTE---IDNTPTKMYAACSAS-YLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGV 130 (337)
T ss_pred HHHHHHHHHHHHHHHhheeeccccc---ccCCcchHHHHHHHH-HHHHHHhccchhcccCCcHHHhcccCCCcceeeeeh
Confidence 3445555555555544444444321 122222344545544 788999999999999999999999999999999999
Q ss_pred HHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCcccccccccccCchhhHHH
Q 039506 161 MMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLG 240 (424)
Q Consensus 161 l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G 240 (424)
++.|++.++++ ..++++.+.|+.+.++ +.....+. + ......|
T Consensus 131 l~~~KsY~w~k------Y~cVL~IV~GValFmY-K~~Kv~g~--e----------------------------~~t~g~G 173 (337)
T KOG1580|consen 131 LFAHKSYHWRK------YCCVLMIVVGVALFMY-KENKVGGA--E----------------------------DKTFGFG 173 (337)
T ss_pred hhhcccccHHH------HHHHHHHHHHHHHhhc-cccccCCC--c----------------------------ccccchH
Confidence 99999999999 9999999999999984 43221111 1 1256789
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHHHHHHHHHHHHhcCCCcccc---cchhHHHHHHHHHHHHHH
Q 039506 241 VLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFGAVLMVITAFFLTNDSTEWS---LTQSELFAVIYAGIIASA 316 (424)
Q Consensus 241 ~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~l~~~g~~~~~ 316 (424)
.++.+++-.+-++...+..+..+.+. ..-.+++++.+.+++.+....++.++-+.... ..+..|+-+..+++ ++.
T Consensus 174 ElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~ 252 (337)
T KOG1580|consen 174 ELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASC 252 (337)
T ss_pred HHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHH
Confidence 99999999998888888777766543 23578899999999988887777664221111 14567777788876 789
Q ss_pred HHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506 317 VNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT 376 (424)
Q Consensus 317 ~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~ 376 (424)
+++.+.+.-+...+|..-+++..+.-.++++.++++++.+++.+||+|.++++.|...=.
T Consensus 253 LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 253 LGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV 312 (337)
T ss_pred hhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence 999999999999999999999999999999999999999999999999999999987643
No 24
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.59 E-value=4.3e-12 Score=121.36 Aligned_cols=299 Identities=13% Similarity=0.124 Sum_probs=212.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHHhhc----ccccC------cCCHHHHHH
Q 039506 50 RAHGAMALVQLFYGGYHVITKVALNVG---VNQLVFCVFRDLLALSILAPIAYFRE----KRTRL------PMTRRLLMS 116 (424)
Q Consensus 50 ~~~~~~l~a~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~~~l~l~~~~~~~~----~~~~~------~~~~~~~~~ 116 (424)
.-++.+++..+.++......|+....+ ..|....++--++-.++.....+... ++..+ ...+++...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 566777888888899999999887544 45666666665555555554444432 11111 124445566
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccC
Q 039506 117 FFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRG 196 (424)
Q Consensus 117 ~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~ 196 (424)
..+-+++ +.+.+-+++.++.+.+++...+...+-.+.|+++.++++++|++++| |.++++...|+.++.....
T Consensus 95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Q------w~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQ------WMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHH------HHHHHHHHHHHHHHhccCC
Confidence 6677777 78888899999999999999999999999999999999999999999 9999999999999963222
Q ss_pred CcccCCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchh-HHHH
Q 039506 197 PALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSV-TAYS 275 (424)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~-~~~~ 275 (424)
+. .+... ..| .++...|....+.++..-+...+...+..|+.+.+..+ ....
T Consensus 168 ~~-~~a~~------------~~~--------------~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL 220 (345)
T KOG2234|consen 168 SP-TGAKS------------ESS--------------AQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQL 220 (345)
T ss_pred CC-CCccC------------CCc--------------ccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence 11 00000 011 13667999999999999999999999999876644444 3444
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCC
Q 039506 276 YFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGS 355 (424)
Q Consensus 276 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e 355 (424)
.+++.+..+...+..+.+...|.--...|-...++-++..+.+=.+...-+|+.+-..=+....+..+++.+.++.++|-
T Consensus 221 ~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~ 300 (345)
T KOG2234|consen 221 YFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDF 300 (345)
T ss_pred HHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 45555555555555543322222111223333333344444454556667788888888888888999999999999999
Q ss_pred CcchhhHHHHHHHHHhhheeeeecccc
Q 039506 356 PIYLGSVLGGCLIIAGLYMVTWVSYRE 382 (424)
Q Consensus 356 ~~~~~~~lG~~lii~g~~l~~~~~~~~ 382 (424)
.||....+|..+++.++.++...+.++
T Consensus 301 ~~t~~F~lG~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 301 QLTLYFLLGALLVILSIFLYSLYPARD 327 (345)
T ss_pred CchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 999999999999999999998555544
No 25
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.57 E-value=2.6e-14 Score=116.38 Aligned_cols=135 Identities=22% Similarity=0.245 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccc-CcCCHHHHHHHHHHHHHHHHHH
Q 039506 50 RAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTR-LPMTRRLLMSFFFLGLTGIFGN 128 (424)
Q Consensus 50 ~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-~~~~~~~~~~~l~~g~lg~~~~ 128 (424)
...++.++++++|+...++.|...+ ++||...+++|.....+++..+....++... ...++|.|..+.+.|+. ..++
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla-~gls 80 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLA-GGLS 80 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHH-HHHH
Confidence 3567899999999999999999998 4999999999999999999988888776432 23578888888888866 6999
Q ss_pred HHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506 129 QLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV 192 (424)
Q Consensus 129 ~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~ 192 (424)
+.+||.|++...++.+..+..+.|+++++++++++|||++..+ ++|+.+..+|++++.
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs 138 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence 9999999999999999999999999999999999999999999 999999999998875
No 26
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.54 E-value=1.3e-13 Score=112.30 Aligned_cols=135 Identities=16% Similarity=0.151 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHH
Q 039506 241 VLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYG 320 (424)
Q Consensus 241 ~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 320 (424)
.++++++++++++..++.|--.++.| |...+..+.......+.......++....-..+.+.|..++..|+ ++.+++.
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGl-a~glswl 82 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGL-AGGLSWL 82 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHH-HHHHHHH
Confidence 47899999999999999999888888 578888888888888888877776433333356888999888885 7899999
Q ss_pred HHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeee
Q 039506 321 LITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTW 377 (424)
Q Consensus 321 l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~ 377 (424)
+|++|++..+++++.++..++|+++++++++++||++|..+|+|+++|++|.+++..
T Consensus 83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 999999999999999999999999999999999999999999999999999998764
No 27
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.51 E-value=2.5e-13 Score=120.73 Aligned_cols=279 Identities=14% Similarity=0.192 Sum_probs=209.8
Q ss_pred HHHHHHHhhc-CCC-hHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcch
Q 039506 66 HVITKVALNV-GVN-QLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTY 143 (424)
Q Consensus 66 ~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~ 143 (424)
.+..|...+. |.+ -+.+.+++.+.+.+-+..+-..+--+.| .++.+.++..+++ .....+.-..+++|+++..
T Consensus 22 TltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR----~t~aK~WfpiSfL-Lv~MIyt~SKsLqyL~vpi 96 (309)
T COG5070 22 TLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR----LTKAKKWFPISFL-LVVMIYTSSKSLQYLAVPI 96 (309)
T ss_pred HHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee----hhhhhhhcCHHHH-HHHHHHhcccceeeeeeeH
Confidence 3445555431 222 4566788888887777666544433333 3333445556666 5666677788999999999
Q ss_pred hhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCcc
Q 039506 144 AAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVG 223 (424)
Q Consensus 144 a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 223 (424)
.+++.++..+.++.....+++.|++..+ ..+.++.++..+...+.|.+...
T Consensus 97 YTiFKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~w~D~q~~~----------------------- 147 (309)
T COG5070 97 YTIFKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVATWGDQQASA----------------------- 147 (309)
T ss_pred HHHhccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhccchhhHHH-----------------------
Confidence 9999999999999999999999999999 99999988888887754432211
Q ss_pred cccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHHHHHHHHHHHHhcCCCcc-cc--c
Q 039506 224 WLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFGAVLMVITAFFLTNDSTE-WS--L 299 (424)
Q Consensus 224 ~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~--~ 299 (424)
+..+..+.|++++...++.-+.+...+|+..+-.+ .....++|..+++.++++.+.+..++..+. .. .
T Consensus 148 --------~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl 219 (309)
T COG5070 148 --------FKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNL 219 (309)
T ss_pred --------HHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCC
Confidence 01125678999999999999999999998766433 347889999999999999999988742211 11 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeec
Q 039506 300 TQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVS 379 (424)
Q Consensus 300 ~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~ 379 (424)
+.....++...|+.+.++ -.+-.|+++..+.+..++++.++-....+.|.+++||+.+...+..+.+-.++.+++...+
T Consensus 220 ~~d~l~am~ISgl~svgi-Sy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavak 298 (309)
T COG5070 220 SVDSLMAMFISGLCSVGI-SYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAK 298 (309)
T ss_pred ChHHHHHHHHHHHHHhhh-hhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 334455677777644444 4458999999999999999999999999999999999999999999999999888888776
Q ss_pred ccccCCCC
Q 039506 380 YRERQAPP 387 (424)
Q Consensus 380 ~~~~~~~~ 387 (424)
.+++++++
T Consensus 299 s~k~q~q~ 306 (309)
T COG5070 299 SKKQQNQK 306 (309)
T ss_pred HHHHhcCC
Confidence 66555443
No 28
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.50 E-value=2.9e-12 Score=120.27 Aligned_cols=231 Identities=18% Similarity=0.198 Sum_probs=168.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHh
Q 039506 110 TRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAI 189 (424)
Q Consensus 110 ~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~ 189 (424)
.+++..++.+-+++ +...+.+.+.++++++++...++..+..+++++++++++|+|++++| |.++.+..+|++
T Consensus 13 ~~~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~q------W~aL~lL~~Gv~ 85 (244)
T PF04142_consen 13 SPKDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQ------WLALFLLVAGVV 85 (244)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhh------HHHHHHHHHHHh
Confidence 57777888888988 89999999999999999999999999999999999999999999999 999999999999
Q ss_pred hhhhccCCcccCCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcc
Q 039506 190 LMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSL 269 (424)
Q Consensus 190 li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~ 269 (424)
++.........+..+. ..+ +.. .......|.++.++++++-++..+..+|..|+.+.++
T Consensus 86 lv~~~~~~~~~~~~~~------~~~-~~~--------------~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~ 144 (244)
T PF04142_consen 86 LVQLSSSQSSDNSSSS------SVH-HDA--------------SNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSL 144 (244)
T ss_pred eeecCCcccccccccc------ccc-ccc--------------ccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhH
Confidence 9864222210000000 000 000 1125679999999999999999999999999876333
Q ss_pred h-hHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHH
Q 039506 270 S-VTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFL 348 (424)
Q Consensus 270 ~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~ 348 (424)
. ......+.+.++.++.....+.+...-.--...|-...+.-++...++=.+....+|+.+...=+.......+++.++
T Consensus 145 ~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~ 224 (244)
T PF04142_consen 145 WIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVL 224 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3 344445555655555544433211110000112222233333445555556777889999999999999999999999
Q ss_pred HHHHcCCCcchhhHHHHHHH
Q 039506 349 SKIFLGSPIYLGSVLGGCLI 368 (424)
Q Consensus 349 ~~l~~~e~~~~~~~lG~~li 368 (424)
+++++|.+++....+|..++
T Consensus 225 s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 225 SVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred HHHHhCCCCchHHhhheecC
Confidence 99999999999999998753
No 29
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.45 E-value=3.6e-13 Score=112.67 Aligned_cols=125 Identities=23% Similarity=0.355 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 039506 60 LFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYT 139 (424)
Q Consensus 60 ~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~ 139 (424)
++||...+..|...++ .||....++|+..+.+ ++++....+++.....+++++...+..+.++...++.+++.|++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 4699999999999986 9999999999999998 6666666555433455777888888889887799999999999999
Q ss_pred CcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506 140 NPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV 192 (424)
Q Consensus 140 ~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~ 192 (424)
+++.++.+.++.|+++.+++++++||++++.+ ++|+++++.|++++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999999875
No 30
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.44 E-value=1.4e-11 Score=114.79 Aligned_cols=264 Identities=17% Similarity=0.194 Sum_probs=209.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHH
Q 039506 78 NQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFL 157 (424)
Q Consensus 78 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~l 157 (424)
++..+.+.+-+.+.++-...+.+++++ ...++.|+.+...++. ...+..+.+.|++|++-..-.+-..+--+-+++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~---~~~~apl~~y~~is~t-n~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWKKE---LSGVAPLYKYSLISFT-NTLSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccccc---CCCCCchhHHhHHHHH-hhcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 478888999999988886655554443 2234455667777777 688889999999999988888888888888899
Q ss_pred HHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCcccccccccccCchhh
Q 039506 158 LAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQW 237 (424)
Q Consensus 158 la~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 237 (424)
.+.++.|+|.+..+ .....+.-.|+-+...++... ..+ ++ |.++.
T Consensus 126 mg~Lvy~~ky~~~e------Yl~~~LIs~GvsiF~l~~~s~--s~~-----------~~----------------g~~ns 170 (327)
T KOG1581|consen 126 MGTLVYGRKYSSFE------YLVAFLISLGVSIFSLFPNSD--SSS-----------KS----------------GRENS 170 (327)
T ss_pred HHHHHhcCccCcHH------HHHHHHHHhheeeEEEecCCC--Ccc-----------cc----------------CCCCc
Confidence 99999999999999 999999999998888654432 111 11 22466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHHHHHHHHHHHHhcCCCcccc---cchhHHHHHHHHHHH
Q 039506 238 HLGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFGAVLMVITAFFLTNDSTEWS---LTQSELFAVIYAGII 313 (424)
Q Consensus 238 ~~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~l~~~g~~ 313 (424)
.+|+.+....-++=+..+....++.++.. ++..++.+.+++.++.........+....... .++..+.-++....
T Consensus 171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~- 249 (327)
T KOG1581|consen 171 PIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST- 249 (327)
T ss_pred hHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-
Confidence 79999999999999999999998888654 45788999999888776666443332111221 25566777777766
Q ss_pred HHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeeccc
Q 039506 314 ASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYR 381 (424)
Q Consensus 314 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~~ 381 (424)
++++++.+.++-+++.++...+.++.+.-+++++++.+.+|.+++..||+|..+++.|+.+-...+++
T Consensus 250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 67889999999999999999999999999999999999999999999999999999999987766665
No 31
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.42 E-value=4.7e-11 Score=111.28 Aligned_cols=252 Identities=12% Similarity=0.097 Sum_probs=186.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccc---cCcCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHH
Q 039506 79 QLVFCVFRDLLALSILAPIAYFREKRT---RLPMTRRLLM-SFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVF 154 (424)
Q Consensus 79 ~~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~~~~~~-~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~ 154 (424)
|..++.++.++-+++.......++++. +-...+++.. +....|+. .++...+-+++++|++.+..+...++.++|
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala-ta~DIGLSN~sl~yVtlSlYTM~KSSsi~F 123 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA-TALDIGLSNWSLEYVTLSLYTMTKSSSILF 123 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh-hhcccccccceeeeeeeeeeeeccccHHHH
Confidence 778888888888777766555544322 2244566544 44456665 799999999999999999999999999999
Q ss_pred HHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCcccccccccccCc
Q 039506 155 TFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGL 234 (424)
Q Consensus 155 ~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 234 (424)
+.+++.+|.=||+++.- ..-+++...|+.+.++ +..
T Consensus 124 IllFs~if~lEk~~w~L------~l~v~lI~~Glflft~-KsT------------------------------------- 159 (349)
T KOG1443|consen 124 ILLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFTY-KST------------------------------------- 159 (349)
T ss_pred HHHHHHHHHhHHHHHHH------HHHHHHHhhheeEEEe-ccc-------------------------------------
Confidence 99999999999998865 5555666666666663 221
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----CcchhHHHHHHHHHHHHHHHHHHhcCCCcc-----ccc-ch-hH
Q 039506 235 DQWHLGVLCLIGNCMCMAAFIAIQAPILRKYP----SSLSVTAYSYFFGAVLMVITAFFLTNDSTE-----WSL-TQ-SE 303 (424)
Q Consensus 235 ~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~-~~-~~ 303 (424)
+-...|..+.+.++++-++.....++..++.| +|+..+........+.+++..+..|+.... +.. +. ..
T Consensus 160 qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~ 239 (349)
T KOG1443|consen 160 QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLI 239 (349)
T ss_pred ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHH
Confidence 24467888888888888877777777777655 578888888888888888888887753322 111 12 23
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506 304 LFAVIYAGIIASAVNYG---LITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT 376 (424)
Q Consensus 304 ~~~l~~~g~~~~~~~~~---l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~ 376 (424)
+..+..++. ++.+++. +-+.-+.+++....++.+...-+.+.+++.++.+|.++...|+|..+.+.|+.++.
T Consensus 240 ~rv~g~i~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 240 LRVIGLISL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 333333322 3444443 34556788899999999999999999999999999999999999999999999883
No 32
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.38 E-value=1.7e-12 Score=108.63 Aligned_cols=125 Identities=22% Similarity=0.441 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 039506 249 MCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKI 328 (424)
Q Consensus 249 l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~ 328 (424)
++||.+.+..|+..++.| +.....+++..+.+ +.+.....+..+ ....+...+...++.+++++.+++.++++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 77 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP-FKNLSPRQWLWLLFLGLLGTALAYLLYFYALKY 77 (126)
T ss_pred ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc-ccCCChhhhhhhhHhhccceehHHHHHHHHHHh
Confidence 468999999999999988 68999999999998 666666655433 234467788888889988889999999999999
Q ss_pred cChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506 329 LGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT 376 (424)
Q Consensus 329 ~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~ 376 (424)
.+++.++.+.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus 78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 78 ISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998753
No 33
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.35 E-value=8.9e-13 Score=120.71 Aligned_cols=267 Identities=16% Similarity=0.146 Sum_probs=204.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccc----c--cCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchH
Q 039506 79 QLVFCVFRDLLALSILAPIAYFREKR----T--RLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIP 152 (424)
Q Consensus 79 ~~~~~~~r~~~~~l~l~~~~~~~~~~----~--~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~P 152 (424)
|..+++++++....+-..+-....+- . ...++.+..+..+...++ ..+...+-+..++|++++...+-..+..
T Consensus 61 plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvV-fi~mI~fnnlcL~yVgVaFYyvgRsLtt 139 (347)
T KOG1442|consen 61 PLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVV-FILMISFNNLCLKYVGVAFYYVGRSLTT 139 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhe-eeeehhccceehhhcceEEEEeccchhh
Confidence 88889999988876666554443321 1 112344555556666666 6777778889999999999999999999
Q ss_pred HHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCccccccccccc
Q 039506 153 VFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDI 232 (424)
Q Consensus 153 i~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 232 (424)
+|++++.++++|+|-+..- ..++.+.++|-.+=+- .+ +..+
T Consensus 140 vFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~lGvd--qE-------------------~~~~------------ 180 (347)
T KOG1442|consen 140 VFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGLGVD--QE-------------------GSTG------------ 180 (347)
T ss_pred hHHHHhHHhhccccccccc------ceeehhheehheeccc--cc-------------------cccC------------
Confidence 9999999999999999887 7888877777655541 11 0111
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC-cchhHHHHHHHHHHHHHHHHHHhcCCCcccc----cchhHHHHH
Q 039506 233 GLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPS-SLSVTAYSYFFGAVLMVITAFFLTNDSTEWS----LTQSELFAV 307 (424)
Q Consensus 233 ~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~l 307 (424)
.-...|.++++.|.++-|+..+..|+......+ .+...+|+.+.+.+..+|...+.++-...+. .....|..+
T Consensus 181 --~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~m 258 (347)
T KOG1442|consen 181 --TLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILM 258 (347)
T ss_pred --ccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHH
Confidence 133589999999999999999999987666543 4566888889999998888887664222222 145778888
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeecccccCCCC
Q 039506 308 IYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQAPP 387 (424)
Q Consensus 308 ~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~~~~~~~~ 387 (424)
...|+++..++|. -.+-+|..+|.+..+-.........+++..+.+|..+...|-|-.+++.|..++++.+++++++++
T Consensus 259 tLsglfgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~ 337 (347)
T KOG1442|consen 259 TLSGLFGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKAS 337 (347)
T ss_pred HHHHHHHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhc
Confidence 8888876666655 556688999999999999999999999999999999999999999999999999998877766554
Q ss_pred C
Q 039506 388 V 388 (424)
Q Consensus 388 ~ 388 (424)
+
T Consensus 338 ~ 338 (347)
T KOG1442|consen 338 A 338 (347)
T ss_pred c
Confidence 3
No 34
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.30 E-value=3e-11 Score=111.15 Aligned_cols=276 Identities=16% Similarity=0.167 Sum_probs=196.4
Q ss_pred HHHHHHHHHHhh---cCC----ChHHHHHHHHHHHHHHHHHHHHhhccccc---------------CcCCHHHHHHHHHH
Q 039506 63 GGYHVITKVALN---VGV----NQLVFCVFRDLLALSILAPIAYFREKRTR---------------LPMTRRLLMSFFFL 120 (424)
Q Consensus 63 ~~~~~~~k~~~~---~~~----~~~~~~~~r~~~~~l~l~~~~~~~~~~~~---------------~~~~~~~~~~~l~~ 120 (424)
+.+.+.+|++-+ .|. .|+..+..-++.-++++..+.+.+.+... ++.++. .++.-
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~---lfl~P 92 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPV---LFLPP 92 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcc---eecCh
Confidence 446677777653 122 26666777777777888887777654211 122222 23334
Q ss_pred HHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCccc
Q 039506 121 GLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALF 200 (424)
Q Consensus 121 g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~ 200 (424)
++| -..+..+.|.|+.+++++..+.+.....+|+.+++..+++++++.+| |.|+.....|++++-..|-..
T Consensus 93 al~-Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~q------Wl~i~fv~lGlviVg~~d~~~-- 163 (372)
T KOG3912|consen 93 ALC-DIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQ------WLGILFVSLGLVIVGSLDVHL-- 163 (372)
T ss_pred HHH-HHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhh------HHHHHHHHhhhheeeeeeccc--
Confidence 555 67788889999999999999999999999999999999999999999 999999999999886432111
Q ss_pred CCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHH
Q 039506 201 GCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFG 279 (424)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~ 279 (424)
.+ +|. . ..++...|+++.+.+-+.-|+.+++.+|..++.+ +|+....|..+++
T Consensus 164 -~~--------------~p~---------~--d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG 217 (372)
T KOG3912|consen 164 -VT--------------DPY---------T--DYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFG 217 (372)
T ss_pred -cc--------------CCc---------c--ccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHH
Confidence 00 110 0 1126679999999999999999999999999876 6799999999999
Q ss_pred HHHHHHHHHHhcCCCc--ccccc----hhHHH---------HHHHHHHHHHHHHHHHHHH----HhhccChhhHhhhcch
Q 039506 280 AVLMVITAFFLTNDST--EWSLT----QSELF---------AVIYAGIIASAVNYGLITW----SNKILGPALVALYNPL 340 (424)
Q Consensus 280 ~~~l~~~~~~~~~~~~--~~~~~----~~~~~---------~l~~~g~~~~~~~~~l~~~----a~~~~~~~~~s~~~~~ 340 (424)
.+++.+++.....-+. .++-+ ..+|. ..++....+...+..+++. -.|..++++-.++..+
T Consensus 218 ~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~l 297 (372)
T KOG3912|consen 218 LVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSL 297 (372)
T ss_pred HHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhh
Confidence 7766555553322111 11100 11111 0122222223333333433 3577899999999999
Q ss_pred hHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506 341 QPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT 376 (424)
Q Consensus 341 ~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~ 376 (424)
...+..+++..+..|.++..|+.|.++.+.|++++.
T Consensus 298 Rt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 298 RTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred hhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999887
No 35
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.23 E-value=5.7e-09 Score=98.02 Aligned_cols=253 Identities=14% Similarity=0.050 Sum_probs=172.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcc-cchHHHHH
Q 039506 78 NQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQ-PSIPVFTF 156 (424)
Q Consensus 78 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~-~l~Pi~~~ 156 (424)
+|....+--...+.++-+....+++. .. ..+.+.+...++.|++ ...++...+.+.++.+++.+-.+. .++-+.+.
T Consensus 11 ~~~~Q~lG~t~Gali~alv~~~~~~p-~~-~~~~~~~~~~~lsG~~-W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~s 87 (269)
T PF06800_consen 11 KPANQILGTTIGALIFALVVFLFRQP-AF-SMSGTSFIVAFLSGAF-WAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTS 87 (269)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCC-Cc-chHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcceeeeccchhHHHHHHH
Confidence 45554444444444444444443322 11 1134778888888988 899999999999999999999885 68888899
Q ss_pred HHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCcccccccccccCchh
Q 039506 157 LLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQ 236 (424)
Q Consensus 157 lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 236 (424)
+.+.++++|--+..+ -..=..++++.++|+++....+.+..... +..+
T Consensus 88 l~gv~~fgEW~~~~~--~~~G~~Al~liiiGv~lts~~~~~~~~~~------------------------------~~~~ 135 (269)
T PF06800_consen 88 LIGVLFFGEWTTTTQ--KIIGFLALVLIIIGVILTSYQDKKSDKSS------------------------------SKSN 135 (269)
T ss_pred HHHHhhcCCCCCcch--HHHHHHHHHHHHHHHHHhccccccccccc------------------------------cccc
Confidence 999999999887665 01113478888899988875433221000 0125
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHH
Q 039506 237 WHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASA 316 (424)
Q Consensus 237 ~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 316 (424)
...|.+..+++.++|..|.+..|.. +.+ +.....-+.+...+...++....+ . ... +...|.. +..|+ .-.
T Consensus 136 ~~kgi~~Ll~stigy~~Y~~~~~~~--~~~-~~~~~lPqaiGm~i~a~i~~~~~~-~-~~~--~k~~~~n-il~G~-~w~ 206 (269)
T PF06800_consen 136 MKKGILALLISTIGYWIYSVIPKAF--HVS-GWSAFLPQAIGMLIGAFIFNLFSK-K-PFF--EKKSWKN-ILTGL-IWG 206 (269)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhc--CCC-hhHhHHHHHHHHHHHHHHHhhccc-c-ccc--ccchHHh-hHHHH-HHH
Confidence 6689999999999999999997763 344 455555554444433333333321 1 111 1223333 33343 345
Q ss_pred HHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhH----HHHHHHHHhhhe
Q 039506 317 VNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSV----LGGCLIIAGLYM 374 (424)
Q Consensus 317 ~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~----lG~~lii~g~~l 374 (424)
++..++..+.+..+.+..=.+.-+.++++.+.+.+++||+-+..++ +|+++++.|.++
T Consensus 207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 6778899999999999999999999999999999999999887644 688888888764
No 36
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.19 E-value=4.3e-10 Score=106.72 Aligned_cols=133 Identities=19% Similarity=0.223 Sum_probs=113.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh--HHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHH
Q 039506 48 VLRAHGAMALVQLFYGGYHVITKVALNVGVNQ--LVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGI 125 (424)
Q Consensus 48 ~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~ 125 (424)
..+|..+.++++++|+...+..|...++ .++ .....+++.++.+++.++....++.. ..+.+++...+..++++.
T Consensus 126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 202 (260)
T TIGR00950 126 NPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPNP--QALSLQWGALLYLGLIGT 202 (260)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcchHHHHHHHHHHHHHH
Confidence 4579999999999999999999998764 664 44455789999988888877654322 335677777888888888
Q ss_pred HHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHh
Q 039506 126 FGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAI 189 (424)
Q Consensus 126 ~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~ 189 (424)
..++.+++.++++.+++.++.+.++.|+++.+++++++||+++..+ ++|..+.+.|++
T Consensus 203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~~ 260 (260)
T TIGR00950 203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhcC
Confidence 8999999999999999999999999999999999999999999999 999999999863
No 37
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.13 E-value=1.7e-10 Score=95.51 Aligned_cols=104 Identities=28% Similarity=0.359 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHHhhcccc--cCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHH
Q 039506 84 VFRDLLALSILAPIAYFREKRT--RLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVM 161 (424)
Q Consensus 84 ~~r~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l 161 (424)
.+|+..+.+++..+...+++.. .+..+++.+.+.+..|.++...++.+++.|+++.+ +.++++.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 5799999999988887765521 12233455666777788866699999999999999 58889999999999999999
Q ss_pred HhhcccccccccccchhhHHHHHHHhHhhhhhc
Q 039506 162 MGTERVNLLTTEGQAKVGGTFICVSGAILMVLF 194 (424)
Q Consensus 162 ~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~ 194 (424)
++|||+++++ +.+++++++|++++.+.
T Consensus 81 ~~~er~~~~~------~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 81 FFKERLSPRR------WLAILLILIGVILIAWS 107 (113)
T ss_pred HhcCCCCHHH------HHHHHHHHHHHHHHhhh
Confidence 9999999999 99999999999999853
No 38
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.11 E-value=4.3e-10 Score=98.53 Aligned_cols=215 Identities=15% Similarity=0.219 Sum_probs=159.4
Q ss_pred HHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCccc
Q 039506 121 GLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALF 200 (424)
Q Consensus 121 g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~ 200 (424)
.++ ..+.++.|..|++..+++.++.+..+...|+.+++++.+++|+...+ +.+.++++.|++++.+.|..-
T Consensus 60 ~i~-Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~DN~~-- 130 (290)
T KOG4314|consen 60 SIF-WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYADNEH-- 130 (290)
T ss_pred EEE-EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEeccchh--
Confidence 455 56788999999999999999999999999999999999999999999 999999999999998543321
Q ss_pred CCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHH
Q 039506 201 GCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGA 280 (424)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~ 280 (424)
.....|+.+++.++.+.|+|.+.-|+.....+- -....++.-.+.
T Consensus 131 ----------------------------------a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~-Gdaa~FmS~LGF 175 (290)
T KOG4314|consen 131 ----------------------------------ADEIIGIACAVGSAFMAALYKVLFKMFIGNANF-GDAAHFMSCLGF 175 (290)
T ss_pred ----------------------------------hhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcc-hhHHHHHHHHHH
Confidence 134589999999999999999999998776551 111111111111
Q ss_pred ----HHHHH-HHHHhcCCCcccc-cchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcC
Q 039506 281 ----VLMVI-TAFFLTNDSTEWS-LTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLG 354 (424)
Q Consensus 281 ----~~l~~-~~~~~~~~~~~~~-~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~ 354 (424)
....+ +.+.+. ....|. .....|..+...+.+..++ .++.+.++....|...++-......--...+.++-+
T Consensus 176 ~NL~~~~~~~lIL~~T-~VE~~qsFA~~PWG~l~G~A~L~lAF-N~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~ 253 (290)
T KOG4314|consen 176 FNLCFISFPALILAFT-GVEHLQSFAAAPWGCLCGAAGLSLAF-NFLINFGIALLNPILISIGMLCGIPGNAAIDILFQE 253 (290)
T ss_pred HHHHHHhhhHHHHHHh-chHHHHHHhhCCchhhhhHHHHHHHH-hhheeehhhhhchhhheehheecCcchhHHHHHHHH
Confidence 11111 111222 222332 2345677776666654443 345788899999999999999999999999977666
Q ss_pred CCcchhhHHHHHHHHHhhheeeeeccc
Q 039506 355 SPIYLGSVLGGCLIIAGLYMVTWVSYR 381 (424)
Q Consensus 355 e~~~~~~~lG~~lii~g~~l~~~~~~~ 381 (424)
-..+...+.|-.++++|.+++..++.+
T Consensus 254 l~~ntl~La~T~iI~i~FiLiiiP~d~ 280 (290)
T KOG4314|consen 254 LEFNTLFLAATCIICIGFILIIIPEDK 280 (290)
T ss_pred HHHHHHHHHHHHHHHHhHHheecccch
Confidence 667899999999999999998876543
No 39
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.08 E-value=3.7e-09 Score=92.00 Aligned_cols=137 Identities=18% Similarity=0.256 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcC------CCcchhHHHHHHHHHHHHHHHHHHhcCCCcccc-----c-----chhH
Q 039506 240 GVLCLIGNCMCMAAFIAIQAPILRKY------PSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWS-----L-----TQSE 303 (424)
Q Consensus 240 G~l~~l~a~l~~a~~~v~~k~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~-----~~~~ 303 (424)
|.++++.|.++.+++.+..|+..++. .++..+..+....+.+.+.+.....+....... . ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67899999999999999999988872 257899999999999999999888775331111 0 1234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeee
Q 039506 304 LFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTW 377 (424)
Q Consensus 304 ~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~ 377 (424)
+..++..|+ .........+..+++.+|...++...+..+..++++++++||+++..+++|+++.++|++++++
T Consensus 81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 444455555 3555667789999999999999999999999999999999999999999999999999998864
No 40
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.03 E-value=4.9e-09 Score=100.98 Aligned_cols=133 Identities=15% Similarity=0.186 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHH
Q 039506 241 VLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYG 320 (424)
Q Consensus 241 ~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 320 (424)
.++.++++++++...+..|+..++.+ + ...+....+++.+.+...... ....++.....++..+..+.++....+.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYL-AQVGWSRLPATFWLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhc-ccCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 46789999999999999998877744 2 345555666666666555432 1133333344455555556667788899
Q ss_pred HHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeee
Q 039506 321 LITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTW 377 (424)
Q Consensus 321 l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~ 377 (424)
++++++++.+++.++++.+++|+++.+++++++||+++..+++|+++++.|+++...
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999988764
No 41
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.03 E-value=1.9e-07 Score=91.27 Aligned_cols=298 Identities=12% Similarity=0.074 Sum_probs=179.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHH-HHHHHHHHHH---HHHHhhc-ccccCcCCHHHHHHHHHH
Q 039506 46 REVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVF-RDLLALSILA---PIAYFRE-KRTRLPMTRRLLMSFFFL 120 (424)
Q Consensus 46 ~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~-r~~~~~l~l~---~~~~~~~-~~~~~~~~~~~~~~~l~~ 120 (424)
++...|+++.+++.++||...+..|.. +. .+ ++..+. ...++.++.- -....+. -......+.+.+...++.
T Consensus 3 ~~~~~G~~~~~i~~~~~GS~~~p~K~~-k~-w~-wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~ 79 (345)
T PRK13499 3 NAIILGIIWHLIGGASSGSFYAPFKKV-KK-WS-WETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF 79 (345)
T ss_pred chhHHHHHHHHHHHHHhhccccccccc-CC-Cc-hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence 456789999999999999999999984 32 33 222111 1111111111 0111100 011222467777888888
Q ss_pred HHHHHHHHHHHHHHHhhccCcchhhhc-ccchHHHHHHHHHHHhhccc---ccccccccchhhHHHHHHHhHhhhhhccC
Q 039506 121 GLTGIFGNQLLFLLGLSYTNPTYAAAI-QPSIPVFTFLLAVMMGTERV---NLLTTEGQAKVGGTFICVSGAILMVLFRG 196 (424)
Q Consensus 121 g~lg~~~~~~~~~~al~~~~~~~a~ii-~~l~Pi~~~lla~l~l~e~~---~~~~~~~~~~~~g~~l~i~Gv~li~~~~~ 196 (424)
|++ ...++..++.++++.+.+.+..+ ..++-++..++..++++|-. +..+ +..-.+|++++++|+++......
T Consensus 80 G~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 80 GAL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHhhh
Confidence 888 89999999999999999999877 57999999999999998754 2222 23347899999999999985211
Q ss_pred CcccCCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHH-------HHHHHhhh-cCCCc
Q 039506 197 PALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFI-------AIQAPILR-KYPSS 268 (424)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~-------v~~k~~~~-~~~~~ 268 (424)
..-.+.+++ +. +..+...|.+.+++++++++.|. ...+...+ +.+ +
T Consensus 157 ~k~~~~~~~----------~~---------------~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~-~ 210 (345)
T PRK13499 157 LKERKMGIK----------KA---------------EEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVD-P 210 (345)
T ss_pred hcccccccc----------cc---------------cccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCC-c
Confidence 110000000 00 11266799999999999999999 44433211 223 2
Q ss_pred chhHHHHHH---HHHHHHH-HHHHHh--cCCC----cccccc----hhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhH
Q 039506 269 LSVTAYSYF---FGAVLMV-ITAFFL--TNDS----TEWSLT----QSELFAVIYAGIIASAVNYGLITWSNKILGPALV 334 (424)
Q Consensus 269 ~~~~~~~~~---~~~~~l~-~~~~~~--~~~~----~~~~~~----~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~ 334 (424)
......+.. .+..+.- +..... .++. .+...+ .+.....+..|+ .=.+++.++..+....+.+..
T Consensus 211 ~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~ 289 (345)
T PRK13499 211 LYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYD 289 (345)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccc
Confidence 333333332 3333222 111211 1111 111111 122222233333 345567777777777754433
Q ss_pred h----hhcchhHHHHHHHHHHHcCCCcc------hhhHHHHHHHHHhhheeee
Q 039506 335 A----LYNPLQPAASAFLSKIFLGSPIY------LGSVLGGCLIIAGLYMVTW 377 (424)
Q Consensus 335 s----~~~~~~pi~~~l~~~l~~~e~~~------~~~~lG~~lii~g~~l~~~ 377 (424)
. +.+.+..+++.+.+. ++||.-+ ..-++|++++++|.++...
T Consensus 290 ~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 290 FVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred hHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 2 444788899999998 5999877 5668999999999987654
No 42
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.01 E-value=9.8e-09 Score=99.49 Aligned_cols=136 Identities=11% Similarity=0.036 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHH
Q 039506 49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGN 128 (424)
Q Consensus 49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~ 128 (424)
..|.++.+.++++|+.+.+..|...++ .++..... ...++.+++.++...... ....+...+...+..|+++..+.
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGAE-HGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP 222 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999999998764 77777644 445566666666655432 11234555555678899988999
Q ss_pred HHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhc
Q 039506 129 QLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLF 194 (424)
Q Consensus 129 ~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~ 194 (424)
+.++++++++.+++.++++.+++|+++.++++++++|+++..+ ++|.++.+.|++.....
T Consensus 223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999 99999999999998743
No 43
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.01 E-value=1.9e-08 Score=92.48 Aligned_cols=225 Identities=17% Similarity=0.239 Sum_probs=175.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506 114 LMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL 193 (424)
Q Consensus 114 ~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~ 193 (424)
|+.+..++.+ ..+.+.+-.-++.|++-..-.++..+--+=+.+.+.++-+.|....+ .++..+..+|+++.+.
T Consensus 106 ~rtY~~la~~-t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d------~~aA~lm~lGli~FTL 178 (367)
T KOG1582|consen 106 WRTYVILAFL-TVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHD------YIAAMLMSLGLIWFTL 178 (367)
T ss_pred hhHhhhhHhh-hhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHH------HHHHHHHHHHHHhhhh
Confidence 4456666777 67788888888888886666666666666677888899999988888 9999999999999987
Q ss_pred ccCCcccCCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhH
Q 039506 194 FRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVT 272 (424)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~ 272 (424)
.|.+. +| +...+|+++.-.|-++-|.-..+..+..+..+ +...+.
T Consensus 179 ADs~~-------------------sP---------------NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~Emv 224 (367)
T KOG1582|consen 179 ADSQT-------------------SP---------------NFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMV 224 (367)
T ss_pred ccccc-------------------CC---------------CcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEE
Confidence 65543 23 24568888888888888887777888887766 235678
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccccc----chhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHH
Q 039506 273 AYSYFFGAVLMVITAFFLTNDSTEWSL----TQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFL 348 (424)
Q Consensus 273 ~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~ 348 (424)
++...++.+.++......++-...|+. +.+.+....+... .+.++......-++..++..++.+....-.+++++
T Consensus 225 fySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~l 303 (367)
T KOG1582|consen 225 FYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILL 303 (367)
T ss_pred EeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHH
Confidence 888888888888877777654444543 3345555555554 46667776777789999999999999999999999
Q ss_pred HHHHcCCCcchhhHHHHHHHHHhhheeeeecc
Q 039506 349 SKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSY 380 (424)
Q Consensus 349 ~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~ 380 (424)
++++|..++|....-|..+++.|+++-.+.++
T Consensus 304 SfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 304 SFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred HHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence 99999999999999999999999998877663
No 44
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.00 E-value=6.2e-09 Score=101.01 Aligned_cols=137 Identities=18% Similarity=0.178 Sum_probs=110.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccc--c-chhHHHHHHHHHH
Q 039506 236 QWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWS--L-TQSELFAVIYAGI 312 (424)
Q Consensus 236 ~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~l~~~g~ 312 (424)
+...|++++++++++|+...+..|.. .+.+ |....+++..++.+.+.+...... +..... . +...+. ....+.
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~ 80 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICR-QWSYLKTLIQTPQKIF-MLAVSA 80 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHcCHHHHH-HHHHHH
Confidence 55689999999999999999999875 5666 689999999999887766654432 111110 0 223332 233566
Q ss_pred HHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506 313 IASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT 376 (424)
Q Consensus 313 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~ 376 (424)
++....+.++++++++.+++.++++.++.|+++.++++++++|+++..+++|+++.++|+++..
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 6778889999999999999999999999999999999999999999999999999999999765
No 45
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.00 E-value=8.7e-09 Score=99.80 Aligned_cols=137 Identities=15% Similarity=0.056 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHH
Q 039506 49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGN 128 (424)
Q Consensus 49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~ 128 (424)
..|.++.++++++|+...+..|...+. ++.....+++..+.+.+.++............+.+.|...+..++++....
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~ 226 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA 226 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999999987543 345566788888888877776554322111235677788888899888899
Q ss_pred HHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506 129 QLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL 193 (424)
Q Consensus 129 ~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~ 193 (424)
+.+++.++++.+++.++.+.++.|+++++++++++||+++..+ ++|.++.+.|+++...
T Consensus 227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~------iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE------WLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 9999999999999864
No 46
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.96 E-value=1e-08 Score=97.25 Aligned_cols=135 Identities=12% Similarity=0.211 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCC---cccc-cchhH-HHHHHHHHHH
Q 039506 239 LGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDS---TEWS-LTQSE-LFAVIYAGII 313 (424)
Q Consensus 239 ~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~-~~~~~-~~~l~~~g~~ 313 (424)
.|.++.++++++|+...+..|. ..+.+ |....+++++++.+.+.+......... ..++ .+... +..+...|+
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~- 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL- 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH-
Confidence 3788999999999999999998 44566 699999999999887766554433110 1111 11222 333444454
Q ss_pred HHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506 314 ASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT 376 (424)
Q Consensus 314 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~ 376 (424)
.....+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.++|+++..
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 467789999999999999999999999999999999999999999999999999999998764
No 47
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.83 E-value=6.2e-08 Score=93.99 Aligned_cols=133 Identities=14% Similarity=0.150 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHH
Q 039506 49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGN 128 (424)
Q Consensus 49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~ 128 (424)
..|.++++.++++|+.+.+..|...++ .++....+ ....+++.+........ ....+...+...+..++ ...++
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~~-~t~~~ 228 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALALWIKYFLSPQP-AMVFSLPAIIKLLLAAA-AMGFG 228 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHHHHHHHHHhcCc-cccCCHHHHHHHHHHHH-HHHHH
Confidence 458899999999999999999998654 67665432 22333333333333221 12345666666666665 47889
Q ss_pred HHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506 129 QLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL 193 (424)
Q Consensus 129 ~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~ 193 (424)
+.+++.++++.+++.++.+.++.|++..++++++++|+++..+ ++|.++.+.|+.+...
T Consensus 229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHhh
Confidence 9999999999999999999999999999999999999999999 9999999999988864
No 48
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.82 E-value=9.1e-08 Score=95.01 Aligned_cols=138 Identities=17% Similarity=0.227 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHH
Q 039506 239 LGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVN 318 (424)
Q Consensus 239 ~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 318 (424)
.-++.+++.-++|+.+.++.|...+..-+|....++++.+++++++++.+..+........+.+.|..+...|+++ .+.
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-~~~ 91 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-SMY 91 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-HHH
Confidence 4457778889999999999999988765678999999999999988887765421111112356677777788766 556
Q ss_pred HHHHHHHhhccChhhHhhhcchhHHHHHHHHHHH------cCCCcchhhHHHHHHHHHhhheeee
Q 039506 319 YGLITWSNKILGPALVALYNPLQPAASAFLSKIF------LGSPIYLGSVLGGCLIIAGLYMVTW 377 (424)
Q Consensus 319 ~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~------~~e~~~~~~~lG~~lii~g~~l~~~ 377 (424)
+.+++.++++++++.++++.++.|+++.++++++ ++|+++..+++|+++.++|+.++..
T Consensus 92 ~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 92 VITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999 6999999999999999999987664
No 49
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.81 E-value=1.6e-07 Score=90.98 Aligned_cols=280 Identities=14% Similarity=0.172 Sum_probs=157.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHH
Q 039506 45 EREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTG 124 (424)
Q Consensus 45 ~~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg 124 (424)
+.+...|..+.+.++++-+......|....+ .+. .-.|. +++.+...+++.|+ .|++.
T Consensus 2 ~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~~~~--------------~~~~~~~l~~~~W~----~G~~~ 59 (300)
T PF05653_consen 2 NTDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GSLRA--------------GSGGRSYLRRPLWW----IGLLL 59 (300)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---ccccc--------------cchhhHHHhhHHHH----HHHHH
Confidence 4567789999999999999999998887643 211 00010 00001111222222 33343
Q ss_pred HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCC
Q 039506 125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGN 204 (424)
Q Consensus 125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~ 204 (424)
+.++..+.+.|+.+.|.+..+.+..+.-++..+++..++|||+++.+ +.|+.+++.|..++....+++. +..
T Consensus 60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~~~~~~-~~~- 131 (300)
T PF05653_consen 60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIFAPKEE-PIH- 131 (300)
T ss_pred HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEeCCCCC-CcC-
Confidence 56666788899999999999999999999999999999999999999 9999999999998875433210 000
Q ss_pred CCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHH--
Q 039506 205 EDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVL-- 282 (424)
Q Consensus 205 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~-- 282 (424)
++ .++.+.-.+..-..+.... ..+...+.....+|..++ + .+.......+.+...
T Consensus 132 -------------t~-------~~l~~~~~~~~fl~y~~~~-~~~~~~L~~~~~~r~g~~-~-i~vyi~i~sl~Gs~tvl 188 (300)
T PF05653_consen 132 -------------TL-------DELIALLSQPGFLVYFILV-LVLILILIFFIKPRYGRR-N-ILVYISICSLIGSFTVL 188 (300)
T ss_pred -------------CH-------HHHHHHhcCcceehhHHHH-HHHHHHHHHhhcchhccc-c-eEEEEEEeccccchhhh
Confidence 00 0000000000001111111 112222222223332222 1 111111111111111
Q ss_pred -----HHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchh-HHHHHHHHHHHcCCC
Q 039506 283 -----MVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQ-PAASAFLSKIFLGSP 356 (424)
Q Consensus 283 -----l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~-pi~~~l~~~l~~~e~ 356 (424)
...+.....++ ..+ .++..|..++.. +.+........++|+++.+++.+.++.+.- ...+++-+.++++|.
T Consensus 189 ~~K~i~~~i~~~~~g~-~~f-~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~ 265 (300)
T PF05653_consen 189 SAKAISILIKLTFSGD-NQF-TYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEF 265 (300)
T ss_pred HHHHHHHHHHHHhcCc-hhh-hhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhccc
Confidence 11111111111 111 134455444333 335565667789999999998877766654 455666678888876
Q ss_pred c--ch----hhHHHHHHHHHhhheeeeecc
Q 039506 357 I--YL----GSVLGGCLIIAGLYMVTWVSY 380 (424)
Q Consensus 357 ~--~~----~~~lG~~lii~g~~l~~~~~~ 380 (424)
. +. ....|+.+++.|++++...+.
T Consensus 266 ~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~ 295 (300)
T PF05653_consen 266 SRMTAWQIIGFLCGFLIIIIGVFLLSSSKD 295 (300)
T ss_pred ccccHHHHHHHHHHHHHHHHhhheeeccCc
Confidence 4 44 345788999999998875443
No 50
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.79 E-value=1.4e-07 Score=79.51 Aligned_cols=121 Identities=14% Similarity=0.131 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHH
Q 039506 239 LGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVN 318 (424)
Q Consensus 239 ~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 318 (424)
.|+++.+++.++-+...++.|+-.++.++ ...... . . ...... . .....+++|+++.+++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~-~----~~~~~~-~------------~p~~~i~lgl~~~~la 61 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F-I----AALLAF-G------------LALRAVLLGLAGYALS 61 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H-H----HHHHHH-h------------ccHHHHHHHHHHHHHH
Confidence 46788899999999999999998877663 221111 0 0 000000 0 0112467788899999
Q ss_pred HHHHHHHhhccChhhHhhhcchhHHHHHHHHHH--HcCCCcchhhHHHHHHHHHhhheeeeec
Q 039506 319 YGLITWSNKILGPALVALYNPLQPAASAFLSKI--FLGSPIYLGSVLGGCLIIAGLYMVTWVS 379 (424)
Q Consensus 319 ~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l--~~~e~~~~~~~lG~~lii~g~~l~~~~~ 379 (424)
+.+|.+++++.+.+.+.++..+.++...+.++. ++||++|+.+++|+++|++|+++....+
T Consensus 62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 999999999999999999999998888888875 8999999999999999999999987543
No 51
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.76 E-value=2.5e-07 Score=89.95 Aligned_cols=138 Identities=12% Similarity=0.163 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh---HHHHHHHHHHHHHHHHHHHHhhcccc-----cCcCCHHHHHHHHHH
Q 039506 49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQ---LVFCVFRDLLALSILAPIAYFREKRT-----RLPMTRRLLMSFFFL 120 (424)
Q Consensus 49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~---~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~~~l~~ 120 (424)
..|..+++.++++|+...+..|...++ .++ .....+....+.+.+........... ....+...+...+..
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL 220 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence 469999999999999999999987643 222 23333344443333332222222111 123466778888899
Q ss_pred HHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506 121 GLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL 193 (424)
Q Consensus 121 g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~ 193 (424)
|+++....+.+++.++++.+++.++.+..+.|++..++++++++|+++..+ ++|.++.++|+.+...
T Consensus 221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999 9999999999988763
No 52
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=98.74 E-value=7.3e-08 Score=88.98 Aligned_cols=262 Identities=13% Similarity=0.083 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCcchhhhcccchHHHHHHH
Q 039506 80 LVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSY-TNPTYAAAIQPSIPVFTFLL 158 (424)
Q Consensus 80 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~-~~~~~a~ii~~l~Pi~~~ll 158 (424)
-.+++.++++-+.--+++--.- ...+++.+.|++ ...-.+ .+..+.+-++|+++ ++...=-++..-.++.++++
T Consensus 34 NLITFaqFlFia~eGlif~skf-~~~k~kiplk~Y---~i~V~m-FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~ 108 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFTSKF-FTVKPKIPLKDY---AITVAM-FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL 108 (330)
T ss_pred eehHHHHHHHHHHhceeeeccc-cccCCCCchhhh---heehhe-eeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence 3456777766655544432110 011233345543 333333 46677788888887 45555556678899999999
Q ss_pred HHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccC-CCCCCCccccccccCCCCCCcccccccccccCchhh
Q 039506 159 AVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFG-CGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQW 237 (424)
Q Consensus 159 a~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 237 (424)
+++++|+|.+.+| +.++++..+|+++.+..+.++... .+..+. ++..+ ....|
T Consensus 109 g~il~~k~Ys~~Q------y~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~------~~~~~--------------~~~~w 162 (330)
T KOG1583|consen 109 GWILLGKRYSLRQ------YSSVLMITIGIIICTLFSSKDGRSKLSGLDS------GSAQS--------------DFFWW 162 (330)
T ss_pred HHHhccceeehhh------hhhHHhhhhhheeEEeecCcchhhhhccccc------Ccccc--------------cchHH
Confidence 9999999999999 999999999999998765544322 000000 00001 12367
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CcchhHHHHHHHHHHHHHHHHH--------HhcCCCccccc----chhHH
Q 039506 238 HLGVLCLIGNCMCMAAFIAIQAPILRKYP-SSLSVTAYSYFFGAVLMVITAF--------FLTNDSTEWSL----TQSEL 304 (424)
Q Consensus 238 ~~G~l~~l~a~l~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~~~~~----~~~~~ 304 (424)
..|+.+..++-+..|.-.+..+..-+++. .+-..++|..+++.+..+...- .+..+....+. -+..|
T Consensus 163 ~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~ 242 (330)
T KOG1583|consen 163 LIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMW 242 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHH
Confidence 88888777777776665555554444432 2346788888887766544321 00000000110 11233
Q ss_pred HHHHHHHHHHHHHHHHHHHHH----hhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeee
Q 039506 305 FAVIYAGIIASAVNYGLITWS----NKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTW 377 (424)
Q Consensus 305 ~~l~~~g~~~~~~~~~l~~~a----~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~ 377 (424)
..++ +..+.+....++ ..+.++.+++++..+.-.++.+++.+.|+.++++.-|+|..+++.|.+++..
T Consensus 243 ~yLl-----~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 243 VYLL-----FNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred HHHH-----HHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3322 233344333333 3455778889999999999999999999999999999999999999998764
No 53
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.73 E-value=1.2e-07 Score=88.16 Aligned_cols=203 Identities=10% Similarity=0.055 Sum_probs=126.9
Q ss_pred CcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcc-----------cCCCCCCCc
Q 039506 140 NPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPAL-----------FGCGNEDFV 208 (424)
Q Consensus 140 ~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~-----------~~~~~~~~~ 208 (424)
+........+..++++++..+.+.++|.+..+ +++.++...|++.....+.+.. .+.++..
T Consensus 3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~------i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~-- 74 (222)
T TIGR00803 3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLK------ILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSS-- 74 (222)
T ss_pred cccchHHHHhcchHHHHHhcccccceeeehHH------HHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCC--
Confidence 33445566778888888888888888888777 8888888888876543222110 0000000
Q ss_pred cccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHH--
Q 039506 209 GENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVIT-- 286 (424)
Q Consensus 209 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 286 (424)
+ .. ...+....|..+.+.++.+-+...+..++..++.+.. .|...+......+.
T Consensus 75 -------~-~~------------~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~----~~~~~~~l~~~~~~~~ 130 (222)
T TIGR00803 75 -------A-KT------------LMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM----FWSRNLQLPLFGLFST 130 (222)
T ss_pred -------c-cc------------cccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc----hHHHHHHHHHHHHHHH
Confidence 0 00 0112456788888888888888888887766554421 22222222221111
Q ss_pred --HHHhcCCC--cccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhH
Q 039506 287 --AFFLTNDS--TEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSV 362 (424)
Q Consensus 287 --~~~~~~~~--~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~ 362 (424)
........ ..+.. ...+....+.-++...++..+..+.+|+.++...+....++++++.+++++++|++++..++
T Consensus 131 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~ 209 (222)
T TIGR00803 131 FSVLLWSDGTLISNFGF-FIGYPTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFY 209 (222)
T ss_pred HHHHhhcccchhhccCc-ccCCchHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHH
Confidence 11111100 01110 01111112222334566777899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhee
Q 039506 363 LGGCLIIAGLYMV 375 (424)
Q Consensus 363 lG~~lii~g~~l~ 375 (424)
+|+.+++.|+.++
T Consensus 210 ~g~~lV~~~~~lY 222 (222)
T TIGR00803 210 LGAILVFLATFLY 222 (222)
T ss_pred HHHHHHHeeeEeC
Confidence 9999999998753
No 54
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.64 E-value=2.1e-07 Score=90.51 Aligned_cols=140 Identities=14% Similarity=0.192 Sum_probs=107.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHHHHHhhcccccCcC---------CH-HHHHH
Q 039506 48 VLRAHGAMALVQLFYGGYHVITKVALNV-GVNQLVFCVFRDLLALSILAPIAYFREKRTRLPM---------TR-RLLMS 116 (424)
Q Consensus 48 ~~~~~~~~l~a~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~---------~~-~~~~~ 116 (424)
+..|.++.++++++|+...+..|...+. ++++..++.+.+..+.++++|+....+....... .. ..+..
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 3569999999999999999999987651 3899999999999999999988765432110000 00 11111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506 117 FFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL 193 (424)
Q Consensus 117 ~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~ 193 (424)
.+..+.......+.+++.+++++++..+++...+.|++++++++++++|+++..+ ++|.++++.|+.+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~------~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ------VFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhH------HHHHHHHHHHHHHHHH
Confidence 2223332233344677789999999999999999999999999999999999999 9999999999998874
No 55
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.62 E-value=2.1e-07 Score=76.94 Aligned_cols=106 Identities=23% Similarity=0.386 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccc-cchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHH
Q 039506 274 YSYFFGAVLMVITAFFLTNDSTEWS-LTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIF 352 (424)
Q Consensus 274 ~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~ 352 (424)
+....+.+.+........+....++ ...+.+..++..|.++...++.++.++.++.++ .++++..++|+++.+++.++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence 4555666666555555332111111 123556666677776666899999999999994 88899999999999999999
Q ss_pred cCCCcchhhHHHHHHHHHhhheeeeecc
Q 039506 353 LGSPIYLGSVLGGCLIIAGLYMVTWVSY 380 (424)
Q Consensus 353 ~~e~~~~~~~lG~~lii~g~~l~~~~~~ 380 (424)
++|+++..+++|.+++++|++++.+.+.
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999887543
No 56
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.53 E-value=1.6e-08 Score=91.84 Aligned_cols=278 Identities=17% Similarity=0.101 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHH
Q 039506 51 AHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQL 130 (424)
Q Consensus 51 ~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~ 130 (424)
.++.+++-++.||....+.... |-+|.+.+.--.+.+.++.+.+++.. .+..+.+.+...++.|.+ ...++.
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~~----~p~~T~~~~iv~~isG~~-Ws~GQ~ 74 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLFV----SPELTLTIFIVGFISGAF-WSFGQA 74 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHheee----cCccchhhHHHHHHhhhH-hhhhhh
Confidence 5677889999999988776544 45677766555555555555444442 335578888888888888 799999
Q ss_pred HHHHHhhccCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCcc
Q 039506 131 LFLLGLSYTNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVG 209 (424)
Q Consensus 131 ~~~~al~~~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~ 209 (424)
..+.|+++.+++.+..+. .++-+-+.+++.+.+||-.+..+ ...-.+++++.++|+.+-...+... .++
T Consensus 75 ~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~--~IlG~iAliliviG~~lTs~~~~~n----k~~---- 144 (288)
T COG4975 75 NQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ--IILGFIALILIVIGIYLTSKQDRNN----KEE---- 144 (288)
T ss_pred hhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh--HHHHHHHHHHHHHhheEeeeecccc----ccc----
Confidence 999999999999999885 68888999999999999988766 1111345666677776665322210 000
Q ss_pred ccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 039506 210 ENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFF 289 (424)
Q Consensus 210 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 289 (424)
+.| ++...|....+.|.++|..|.+..+... .+ -+....-+.....+..+.+...
T Consensus 145 -------~~~---------------~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v~-g~saiLPqAiGMv~~ali~~~~ 199 (288)
T COG4975 145 -------ENP---------------SNLKKGIVILLISTLGYVGYVVLFQLFD--VD-GLSAILPQAIGMVIGALILGFF 199 (288)
T ss_pred -------cCh---------------HhhhhheeeeeeeccceeeeEeeecccc--cc-chhhhhHHHHHHHHHHHHHhhc
Confidence 112 3667888888999999999999877664 33 2333333333322222222222
Q ss_pred hcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhH----HHH
Q 039506 290 LTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSV----LGG 365 (424)
Q Consensus 290 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~----lG~ 365 (424)
. ...+.+...|. -+.-|.+ =.++...+..+.++.+.+..=.+.-+..+++.+-+.++++|+-|..++ +|.
T Consensus 200 ~----~~~~~~K~t~~-nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGi 273 (288)
T COG4975 200 K----MEKRFNKYTWL-NIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGI 273 (288)
T ss_pred c----cccchHHHHHH-HHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhH
Confidence 1 11121223333 3334443 355677788888888887777777788899999999999999998875 588
Q ss_pred HHHHHhhheeee
Q 039506 366 CLIIAGLYMVTW 377 (424)
Q Consensus 366 ~lii~g~~l~~~ 377 (424)
++++.|.++...
T Consensus 274 ilivvgai~lg~ 285 (288)
T COG4975 274 ILIVVGAILLGI 285 (288)
T ss_pred HHHHHHhhhhhe
Confidence 888888776543
No 57
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.51 E-value=4.5e-06 Score=79.87 Aligned_cols=134 Identities=21% Similarity=0.245 Sum_probs=107.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHH-HHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHH
Q 039506 48 VLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCV-FRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIF 126 (424)
Q Consensus 48 ~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~ 126 (424)
...+..+.+.++++|+.+.+..|... + .++..... +.+.....+..+..... .. .....+.+......|+++..
T Consensus 152 ~~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~g~~~~~ 226 (292)
T COG0697 152 SLLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFLSG-FG--APILSRAWLLLLYLGVFSTG 226 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHhcc-cc--ccCCHHHHHHHHHHHHHHHH
Confidence 45899999999999999999999876 3 66666665 34332222222222211 11 24467788888999999777
Q ss_pred HHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506 127 GNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV 192 (424)
Q Consensus 127 ~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~ 192 (424)
.++.+++.+++..+++.++.+..+.|++..++++++++|+++..+ ++|..+.+.|+.+..
T Consensus 227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~ 286 (292)
T COG0697 227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999 999999999999886
No 58
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.48 E-value=2.9e-06 Score=82.12 Aligned_cols=128 Identities=12% Similarity=0.118 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH----HHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHH
Q 039506 49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDL----LALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTG 124 (424)
Q Consensus 49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg 124 (424)
.+|+++.++++++++.+.+..|.. +.+|...++.... .+.+++.++ + + .+ +...+..+..+..|++
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~-~-~~-~~~~~~~~~~~~~Gi~- 220 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---I-L-AK-PLKKYAILLNILPGLM- 220 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---h-c-cc-chHHHHHHHHHHHHHH-
Confidence 469999999999999999999976 3788887555555 333333333 1 1 11 2234444556668988
Q ss_pred HHHHHHHHHHHhh-ccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchh----hHHHHHHHhHhhhh
Q 039506 125 IFGNQLLFLLGLS-YTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKV----GGTFICVSGAILMV 192 (424)
Q Consensus 125 ~~~~~~~~~~al~-~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~----~g~~l~i~Gv~li~ 192 (424)
....+.+|+.+.+ +.+++.++++.+..|+...+.+++++||+.++++ + +|.++.+.|+.++.
T Consensus 221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHh
Confidence 7999999999999 9999999999999999999999999999999999 8 99999999998875
No 59
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.45 E-value=4.6e-06 Score=72.43 Aligned_cols=134 Identities=20% Similarity=0.263 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc------CCChHHHHHHHHHHHHHHHHHHHHhhccccc-C-----c-----CCHHH
Q 039506 51 AHGAMALVQLFYGGYHVITKVALNV------GVNQLVFCVFRDLLALSILAPIAYFREKRTR-L-----P-----MTRRL 113 (424)
Q Consensus 51 ~~~~~l~a~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-~-----~-----~~~~~ 113 (424)
|.++++.+.++.+...+..|...+. +.++..+..+....+.+++++.....+.... . . ...+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 4678899999999999999987754 6889999999999999999998777655321 0 0 02344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhh
Q 039506 114 LMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILM 191 (424)
Q Consensus 114 ~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li 191 (424)
+..++..|++ ..+.+...+..++++++...++....-.+++.++++++++|+++..+ ++|+.+++.|+++-
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhee
Confidence 5566667777 57888999999999999999999999999999999999999999999 99999999998753
No 60
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.44 E-value=7.8e-06 Score=81.24 Aligned_cols=134 Identities=13% Similarity=0.075 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHH
Q 039506 243 CLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLI 322 (424)
Q Consensus 243 ~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~ 322 (424)
+.++-=.+...+++..|...+..|-|+.+..++++++.+.+.+..................+..++.+|++. ...+...
T Consensus 53 ~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~-~~~~~~~ 131 (350)
T PTZ00343 53 LFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCH-LFVHFGA 131 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHH
Confidence 333333444566888899988887579999999999987655443321111111211234566777777754 4456667
Q ss_pred HHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeee
Q 039506 323 TWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTW 377 (424)
Q Consensus 323 ~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~ 377 (424)
+.++++.+++.++++.+++|++++++++++++|+++..+++|++++++|+.+...
T Consensus 132 ~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 132 VISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 8999999999999999999999999999999999999999999999999998764
No 61
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.37 E-value=6e-06 Score=67.93 Aligned_cols=70 Identities=21% Similarity=0.154 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506 117 FFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV 192 (424)
Q Consensus 117 ~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~ 192 (424)
....+++++.+++.++..++++.|.+.+..+.++.++++.+++++++|||++.++ ++|+.+.++|++++.
T Consensus 39 ~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 39 WLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence 3344446688899999999999999999999999999999999999999999999 999999999999885
No 62
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.36 E-value=5.3e-06 Score=76.03 Aligned_cols=135 Identities=12% Similarity=-0.002 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHH
Q 039506 49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGN 128 (424)
Q Consensus 49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~ 128 (424)
..|..+.+.+..||+.+.+..|...+. .+...-+.+.+.+++++.+|+-....... -..+......+..++++..+.
T Consensus 147 p~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlSSalP 223 (292)
T COG5006 147 PVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLSSALP 223 (292)
T ss_pred HHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHhcccc
Confidence 478999999999999999999998864 56666688999999999999877544322 235677778888999999999
Q ss_pred HHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506 129 QLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV 192 (424)
Q Consensus 129 ~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~ 192 (424)
+.+-..+++..|...-+++.++.|.+.++.+++++||+++..| |.++...+.+..=.+
T Consensus 224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q------wlaI~~ViaAsaG~~ 281 (292)
T COG5006 224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ------WLAIAAVIAASAGST 281 (292)
T ss_pred hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999 999998888876444
No 63
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.31 E-value=6.9e-06 Score=67.57 Aligned_cols=67 Identities=10% Similarity=0.051 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506 310 AGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT 376 (424)
Q Consensus 310 ~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~ 376 (424)
.++++..+++.++.+++++.+.+.+..+.++.++.+.+++++++||++++.+++|.+++++|++++.
T Consensus 42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3445677799999999999999999999999999999999999999999999999999999998754
No 64
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.18 E-value=4.2e-05 Score=74.89 Aligned_cols=142 Identities=11% Similarity=0.086 Sum_probs=109.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhccccc--CcCCHHHHHHHHHHHHH
Q 039506 46 REVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTR--LPMTRRLLMSFFFLGLT 123 (424)
Q Consensus 46 ~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~--~~~~~~~~~~~l~~g~l 123 (424)
.+..+|-+++++++.++|.+.+.-+...++ .+..+....--++++++..+....-++... ...+.+....++..+ +
T Consensus 164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~-~ 241 (334)
T PF06027_consen 164 SNPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYA-L 241 (334)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHH-H
Confidence 356789999999999999999999998875 788887766667777777766655444322 123444443333333 3
Q ss_pred HHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhcc
Q 039506 124 GIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFR 195 (424)
Q Consensus 124 g~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~ 195 (424)
+....+.+.-..+++.++....+-.-+..+++.++.++++|+++++.. ++|.++.++|.++....+
T Consensus 242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly------~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY------ILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH------HHHHHHHHHHhheEEccC
Confidence 366777777888999999888888888999999999999999999999 999999999999987533
No 65
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.16 E-value=1.6e-05 Score=74.67 Aligned_cols=138 Identities=15% Similarity=0.212 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccc--cchhHHHHHHHHHHHHH
Q 039506 238 HLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWS--LTQSELFAVIYAGIIAS 315 (424)
Q Consensus 238 ~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~l~~~g~~~~ 315 (424)
..|+++++.|-+.|+..-...|-. +..+ +..+..++.+.+.+.++.......+....++ .+++.+...+..+.+ .
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence 479999999999999988877664 5556 4788999999988887777666543222222 245666666666664 5
Q ss_pred HHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506 316 AVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV 378 (424)
Q Consensus 316 ~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~ 378 (424)
...+.++.+|........+|+-.+++|.+.++++.++++|+++..|++..++..+|+....+.
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 668899999999999999999999999999999999999999999999999999999876644
No 66
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.15 E-value=3.5e-05 Score=65.04 Aligned_cols=118 Identities=19% Similarity=0.105 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHH
Q 039506 50 RAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQ 129 (424)
Q Consensus 50 ~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~ 129 (424)
.++++.++..++-+...++.|...++ .+....... . .. ..... . ++ ..++..|+.+..+++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~~----~~~~~---~------~p---~~~i~lgl~~~~la~ 62 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-IA----ALLAF---G------LA---LRAVLLGLAGYALSM 62 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-HH----HHHHH---h------cc---HHHHHHHHHHHHHHH
Confidence 36777888888888888888887764 443332111 1 00 00000 0 01 125667888889999
Q ss_pred HHHHHHhhccCcchhhhcccchHHHHHHHHHH--HhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506 130 LLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVM--MGTERVNLLTTEGQAKVGGTFICVSGAILMV 192 (424)
Q Consensus 130 ~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l--~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~ 192 (424)
.++..++++.|++.+..+....++++.+.++. ++||+++..+ ++|+++.++|++++.
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhc
Confidence 99999999999999999999998888888885 8999999999 999999999999986
No 67
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.00 E-value=6.2e-05 Score=71.61 Aligned_cols=281 Identities=12% Similarity=0.168 Sum_probs=161.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHH
Q 039506 44 MEREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLT 123 (424)
Q Consensus 44 ~~~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~l 123 (424)
|+.+...|..+.+.+.++.|.++.+-|....+ ... .- .|.+....+ ..+. +....|.+
T Consensus 15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~---------------~ra~~gg~~-yl~~--~~Ww~G~l 72 (335)
T KOG2922|consen 15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SG---------------LRAGEGGYG-YLKE--PLWWAGML 72 (335)
T ss_pred hccCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hc---------------ccccCCCcc-hhhh--HHHHHHHH
Confidence 45567788999999999999999998887654 211 11 111111111 1122 22234666
Q ss_pred HHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCC
Q 039506 124 GIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCG 203 (424)
Q Consensus 124 g~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~ 203 (424)
.+.++...-+.|..+.|++..+.+-.+..+..++++..++|||++... .+|+.+++.|..+++...+.+ .
T Consensus 73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~haP~e----~ 142 (335)
T KOG2922|consen 73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVIHAPKE----Q 142 (335)
T ss_pred HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEEecCcc----c
Confidence 667777888889999999999999999999999999999999999999 999999999999998532211 0
Q ss_pred CCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHH
Q 039506 204 NEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLM 283 (424)
Q Consensus 204 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l 283 (424)
+. ... .++++.-.+.--..+...+... ..+-....|+. ....+.+.......+.+....
T Consensus 143 ~i--~t~----------------~el~~~~~~~~Fliy~~~iil~--~~il~~~~~p~-~g~tnilvyi~i~s~iGS~tV 201 (335)
T KOG2922|consen 143 EI--ESV----------------EEVWELATEPGFLVYVIIIILI--VLILIFFYAPR-YGQTNILVYIGICSLIGSLTV 201 (335)
T ss_pred cc--ccH----------------HHHHHHhcCccHHHHHHHHHHH--HHHHheeeccc-ccccceeehhhHhhhhcceee
Confidence 00 000 1111111111111111111111 11112222211 111122333333333321110
Q ss_pred -----HHHH--HHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcch-hHHHHHHHHHHHcCC
Q 039506 284 -----VITA--FFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPL-QPAASAFLSKIFLGS 355 (424)
Q Consensus 284 -----~~~~--~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~-~pi~~~l~~~l~~~e 355 (424)
+-.+ .-..+. .... .+..|..++.... |...-.--.++|++..+++.++++.+. -..++++.+.++|+|
T Consensus 202 ~svKalg~aiklt~~g~-~ql~-~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fke 278 (335)
T KOG2922|consen 202 MSVKALGIAIKLTFSGN-NQLF-YPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKE 278 (335)
T ss_pred eeHHHHHHHHHHHhcCC-cccc-cHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 0011 111111 1111 2345555444443 455556668999999999888887764 345666778888887
Q ss_pred Cc--c----hhhHHHHHHHHHhhheeeeecc
Q 039506 356 PI--Y----LGSVLGGCLIIAGLYMVTWVSY 380 (424)
Q Consensus 356 ~~--~----~~~~lG~~lii~g~~l~~~~~~ 380 (424)
.- + .....|+..++.|++++...+.
T Consensus 279 w~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd 309 (335)
T KOG2922|consen 279 WSGQDALDIAGELCGFVTIFLGIFLLHRTKD 309 (335)
T ss_pred hcCCcHHHHHHHHHhHHHhhheeeEeeeecc
Confidence 64 2 3466799999999998865443
No 68
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.94 E-value=9.7e-05 Score=69.72 Aligned_cols=131 Identities=18% Similarity=0.074 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHH
Q 039506 49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGN 128 (424)
Q Consensus 49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~ 128 (424)
.+++...+++.+.+..+.++.|.. ++++....+-+.+...+.-+++....+++ . ..|..++-++.|++ ...+
T Consensus 137 ~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~~~~---~-~~k~~~~nil~G~~-w~ig 208 (269)
T PF06800_consen 137 KKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFSKKP---F-FEKKSWKNILTGLI-WGIG 208 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhccccc---c-cccchHHhhHHHHH-HHHH
Confidence 468888999999999999998874 47787766655444444444443333221 1 22333455677888 7899
Q ss_pred HHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHh
Q 039506 129 QLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAI 189 (424)
Q Consensus 129 ~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~ 189 (424)
+.+++.+.+....+.+-.+..+.+++..+.+.+++||+=++++ ....++|+++.++|.+
T Consensus 209 nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke--~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 209 NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE--MIYTLIGLILIVIGAI 267 (269)
T ss_pred HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh--HHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999977665 2233455555555544
No 69
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.84 E-value=5.6e-06 Score=76.38 Aligned_cols=153 Identities=14% Similarity=0.239 Sum_probs=105.9
Q ss_pred cccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccch
Q 039506 222 VGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQ 301 (424)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 301 (424)
.+|+.--+-..+.+..+.|.++..++ ..+-..+++.++.....| ....-..+++-.++..+..+.+-. ..+- +.
T Consensus 21 ~r~~e~~~qri~~d~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~p--~e~a~~r~l~~mlit~pcliy~~~--~v~g-p~ 94 (346)
T KOG4510|consen 21 PRWLERTLQRISKDKPNLGLLLLTVS-YFFNSCMVVSTKVLENDP--MELASFRLLVRMLITYPCLIYYMQ--PVIG-PE 94 (346)
T ss_pred ccHHHHHhhHhhcCCCccCceehhhH-HHHhhHHHhhhhhhccCh--hHhhhhhhhhehhhhheEEEEEee--eeec-CC
Confidence 34544444444556677899888888 777778888877665544 445445554444444444333221 1111 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeeccc
Q 039506 302 SELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYR 381 (424)
Q Consensus 302 ~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~~ 381 (424)
..=.+++.=|+ -+..+..+.++++++.+.+.+.++..+.|++++++++++++|+.+..+.+|..+.+.|++++.+.+.-
T Consensus 95 g~R~~LiLRg~-mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFl 173 (346)
T KOG4510|consen 95 GKRKWLILRGF-MGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFL 173 (346)
T ss_pred CcEEEEEeehh-hhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcc
Confidence 11112233344 35557888999999999999999999999999999999999999999999999999999999876543
No 70
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.81 E-value=0.00031 Score=58.28 Aligned_cols=69 Identities=10% Similarity=0.214 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHhhccChhhHhhh-cchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeec
Q 039506 311 GIIASAVNYGLITWSNKILGPALVALY-NPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVS 379 (424)
Q Consensus 311 g~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~ 379 (424)
.+++..+++.++.+++|+.+.+.+=.+ .-+..+.+.+.+++++||++|+.+++|+.++++|++.+....
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 344567789999999999988665444 567888899999999999999999999999999999875543
No 71
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.63 E-value=0.0015 Score=55.92 Aligned_cols=130 Identities=22% Similarity=0.226 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccc-cchhHHHHHHHHHHHHHHHHH
Q 039506 241 VLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWS-LTQSELFAVIYAGIIASAVNY 319 (424)
Q Consensus 241 ~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~l~~~g~~~~~~~~ 319 (424)
.+++++++++-++...++.++.++..+|+...+..+..+.+.+.......++. .++ .....|+ .++|.+.+....
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w--~~lGG~lG~~~V 78 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWW--AYLGGLLGVFFV 78 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChH--HhccHHHHHHHH
Confidence 57889999999999999999988887678999999999998888888777643 222 1222232 233545566677
Q ss_pred HHHHHHhhccChhhHh-hhcchhHHHHHHHHHH-H---cCCCcchhhHHHHHHHHHhhhe
Q 039506 320 GLITWSNKILGPALVA-LYNPLQPAASAFLSKI-F---LGSPIYLGSVLGGCLIIAGLYM 374 (424)
Q Consensus 320 ~l~~~a~~~~~~~~~s-~~~~~~pi~~~l~~~l-~---~~e~~~~~~~lG~~lii~g~~l 374 (424)
.+....+++.+++... ....-+.+.+.+++.+ . -+.++++.+++|..++++|+++
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 7788888999886654 4556678888888886 2 3467899999999999999864
No 72
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.60 E-value=0.0015 Score=63.52 Aligned_cols=137 Identities=13% Similarity=0.161 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-hcCCChHHHHHHHHHHHHHHHHHHHHh--hccccc----CcCCHHHHHHHHHHHH
Q 039506 50 RAHGAMALVQLFYGGYHVITKVAL-NVGVNQLVFCVFRDLLALSILAPIAYF--REKRTR----LPMTRRLLMSFFFLGL 122 (424)
Q Consensus 50 ~~~~~~l~a~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~~~l~l~~~~~~--~~~~~~----~~~~~~~~~~~l~~g~ 122 (424)
.|+++++++.++-|...+..+... +++.++.+.+++-...+.++.++.... .+.... ....+..+..++...+
T Consensus 154 ~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~ 233 (303)
T PF08449_consen 154 LGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL 233 (303)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence 399999999999999999999877 456889999999999998888877766 322110 0112334455566666
Q ss_pred HHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506 123 TGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL 193 (424)
Q Consensus 123 lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~ 193 (424)
+ ...+..+.+.-.+..++...+++..+--+++.+++.++++++++..+ |+|+++.+.|..+-..
T Consensus 234 ~-~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~------~~G~~lv~~g~~~~~~ 297 (303)
T PF08449_consen 234 T-GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQ------WIGIVLVFAGIFLYSY 297 (303)
T ss_pred H-HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHH------HHHHHHhHHHHHHHHH
Confidence 6 46666677778899999999999999999999999999999999999 9999999999988874
No 73
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.48 E-value=0.00056 Score=55.99 Aligned_cols=67 Identities=19% Similarity=0.292 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHhhccChhhHhhh-cchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506 312 IIASAVNYGLITWSNKILGPALVALY-NPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV 378 (424)
Q Consensus 312 ~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~ 378 (424)
+++..+++.++..++|+.+.+.+=.+ .-+..+.+.+.++++++|++++.+++|+.++++|++.....
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 44567788889999999988665444 56788888999999999999999999999999999988543
No 74
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.47 E-value=0.0012 Score=63.95 Aligned_cols=121 Identities=21% Similarity=0.227 Sum_probs=89.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHH
Q 039506 236 QWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIAS 315 (424)
Q Consensus 236 ~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 315 (424)
.+..|.+++++++++.+...++.|+...+.+. -..-.-. -.. ..+ ....|+. |.+..
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~~--------~~~--------~~l--~~~~W~~----G~~~~ 60 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAGS--------GGR--------SYL--RRPLWWI----GLLLM 60 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccc--------hhh--------HHH--hhHHHHH----HHHHH
Confidence 56799999999999999999999987666552 0000000 000 000 1222332 22233
Q ss_pred HHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeec
Q 039506 316 AVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVS 379 (424)
Q Consensus 316 ~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~ 379 (424)
.++..+.+.|+...|++.++++..+..++..+++..++||+++...++|++++++|..+.....
T Consensus 61 ~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~ 124 (300)
T PF05653_consen 61 VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA 124 (300)
T ss_pred hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence 4566677789999999999999999999999999999999999999999999999998876544
No 75
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=97.41 E-value=0.057 Score=52.49 Aligned_cols=300 Identities=15% Similarity=0.084 Sum_probs=172.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcc-----cccCcCCHHHHHHHHH
Q 039506 45 EREVLRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREK-----RTRLPMTRRLLMSFFF 119 (424)
Q Consensus 45 ~~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~-----~~~~~~~~~~~~~~l~ 119 (424)
+.....|+++..++.++-+...+-.|..-+ .+ ++..+.-..+-..+.+|+....-. ......+...+....+
T Consensus 2 ~~~ii~Gii~h~iGg~~~~sfy~P~kkvk~--Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l 78 (344)
T PF06379_consen 2 NSAIILGIIFHAIGGFASGSFYVPFKKVKG--WS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFL 78 (344)
T ss_pred CchHHHHHHHHHHHHHHhhhhccchhhcCC--cc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHH
Confidence 445678999999999999999888887643 33 333333333333444444332111 1111224455666677
Q ss_pred HHHHHHHHHHHHHHHHhhccCcchhhhc-ccchHHHHHHHHHHHhhcccc-cccccccchhhHHHHHHHhHhhhhhccCC
Q 039506 120 LGLTGIFGNQLLFLLGLSYTNPTYAAAI-QPSIPVFTFLLAVMMGTERVN-LLTTEGQAKVGGTFICVSGAILMVLFRGP 197 (424)
Q Consensus 120 ~g~lg~~~~~~~~~~al~~~~~~~a~ii-~~l~Pi~~~lla~l~l~e~~~-~~~~~~~~~~~g~~l~i~Gv~li~~~~~~ 197 (424)
.|++ -..+...|-.+++|+..+...-| ..+..++-.++-.++.++--. ..+..++.-++|++++++|+.++......
T Consensus 79 ~G~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~ 157 (344)
T PF06379_consen 79 FGVL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSM 157 (344)
T ss_pred HHHH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHh
Confidence 8888 78888999999999999988655 577777877777776543210 11233555699999999999999742111
Q ss_pred cccCCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh--------cCCCcc
Q 039506 198 ALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILR--------KYPSSL 269 (424)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~--------~~~~~~ 269 (424)
.-.+.++ +. ...+...|.+.+++|+++.|.+++-...-.. ..+ |+
T Consensus 158 Ke~~~~~-----------~~---------------~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~-~l 210 (344)
T PF06379_consen 158 KEKELGE-----------EA---------------KEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVN-PL 210 (344)
T ss_pred hhhhhcc-----------ch---------------hhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCC-cH
Confidence 0000000 00 1126679999999999999998876542110 111 11
Q ss_pred hh----HHHHHHHHHHHHHHHHHHhcC--C-C---ccccc--c--hhHHHHHHHHHHHHHHHHHHHHHHHhhccC----h
Q 039506 270 SV----TAYSYFFGAVLMVITAFFLTN--D-S---TEWSL--T--QSELFAVIYAGIIASAVNYGLITWSNKILG----P 331 (424)
Q Consensus 270 ~~----~~~~~~~~~~~l~~~~~~~~~--~-~---~~~~~--~--~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~----~ 331 (424)
.. ....+..+.+.-....++... . . .+... + ...+...+..|++ =...++.|..+-.+.+ .
T Consensus 211 ~~~l~~~vvv~~GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~ 289 (344)
T PF06379_consen 211 YANLPVYVVVLWGGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPF 289 (344)
T ss_pred HHhCchhhhhhhhHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCcccc
Confidence 11 112222333333333333211 1 1 12211 1 1333333334443 3445556666655555 4
Q ss_pred hhHhhhcchhHHHHHHHHHHHcCCC------cchhhHHHHHHHHHhhheeee
Q 039506 332 ALVALYNPLQPAASAFLSKIFLGSP------IYLGSVLGGCLIIAGLYMVTW 377 (424)
Q Consensus 332 ~~~s~~~~~~pi~~~l~~~l~~~e~------~~~~~~lG~~lii~g~~l~~~ 377 (424)
.--.+.+.+..+++-+++++ ++|. .-..-++|+++++++++++-+
T Consensus 290 ~sW~i~ma~~vl~snvwGl~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 290 SSWAIHMALIVLFSNVWGLI-LKEWKGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 56677888889999999965 5553 224457899998888876543
No 76
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.34 E-value=0.0033 Score=53.97 Aligned_cols=137 Identities=20% Similarity=0.218 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCccccc-chhHHHHHHHHHHHHHH
Q 039506 238 HLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSL-TQSELFAVIYAGIIASA 316 (424)
Q Consensus 238 ~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~l~~~g~~~~~ 316 (424)
....+++++++++-.+...++.++.+..++|+...+..+..+++.+..+.+..+ .+..+.. ....|+. ++|.+.+.
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~-~~~~~a~~~~~pwW~--~~GG~lGa 80 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQ-GHPGLAAVASAPWWA--WIGGLLGA 80 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhc-CCCchhhccCCchHH--HHccchhh
Confidence 356788999999999999999999988887888999999999988888777744 3333332 2222222 22223333
Q ss_pred HHHHHHHHHhhccCh-hhHhhhcchhHHHHHHHHHHHcC----CCcchhhHHHHHHHHHhhheeee
Q 039506 317 VNYGLITWSNKILGP-ALVALYNPLQPAASAFLSKIFLG----SPIYLGSVLGGCLIIAGLYMVTW 377 (424)
Q Consensus 317 ~~~~l~~~a~~~~~~-~~~s~~~~~~pi~~~l~~~l~~~----e~~~~~~~lG~~lii~g~~l~~~ 377 (424)
+-...-....++.++ .....+..-+.+.+++++.+=+. .+++...++|++++++|+++...
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 333444555666655 56667778888888988876443 56799999999999999665543
No 77
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.26 E-value=0.003 Score=51.56 Aligned_cols=64 Identities=13% Similarity=0.066 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHhhccCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhh
Q 039506 122 LTGIFGNQLLFLLGLSYTNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILM 191 (424)
Q Consensus 122 ~lg~~~~~~~~~~al~~~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li 191 (424)
..+...++.+...++++.|.+.+-.+. ..-.+.+.+.+++++||+++..+ ++|+.+.+.|++.+
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~l 106 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHh
Confidence 333788999999999999999998774 68899999999999999999999 99999999999886
No 78
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.23 E-value=0.001 Score=55.20 Aligned_cols=67 Identities=19% Similarity=0.188 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHhhccCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506 121 GLTGIFGNQLLFLLGLSYTNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL 193 (424)
Q Consensus 121 g~lg~~~~~~~~~~al~~~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~ 193 (424)
.+.+...+++++..++++.|.+.+..+. .+.-+.+.++++++++|+++..+ ++|+.+.++|++++-.
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhhc
Confidence 3444788999999999999999998885 69999999999999999999999 9999999999988863
No 79
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.19 E-value=0.0013 Score=53.77 Aligned_cols=67 Identities=21% Similarity=0.212 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHhhccCcchhhhc-ccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506 121 GLTGIFGNQLLFLLGLSYTNPTYAAAI-QPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL 193 (424)
Q Consensus 121 g~lg~~~~~~~~~~al~~~~~~~a~ii-~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~ 193 (424)
.+.+...++.++..++++.|.+.+..+ ..+.-+.+.+++++++||+++..+ ++|+.+.++|++++-.
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence 344478899999999999999999888 468999999999999999999999 9999999999999963
No 80
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.18 E-value=0.0066 Score=51.89 Aligned_cols=130 Identities=12% Similarity=0.054 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHH
Q 039506 52 HGAMALVQLFYGGYHVITKVALNVGVN-QLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQL 130 (424)
Q Consensus 52 ~~~~l~a~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~ 130 (424)
+++.+++..+.+.+..+.-.+.++ .+ |...+++.+..+++.+..+....+++.....+... ++...-|++| .....
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p-~w~~lGG~lG-~~~V~ 79 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVP-WWAYLGGLLG-VFFVL 79 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCC-hHHhccHHHH-HHHHH
Confidence 456677777778888887777775 65 99999999999999998888777664222222222 3344477775 77778
Q ss_pred HHHHHhhccCcchhhhccc-chHHHHHHHHHH----HhhcccccccccccchhhHHHHHHHhHhh
Q 039506 131 LFLLGLSYTNPTYAAAIQP-SIPVFTFLLAVM----MGTERVNLLTTEGQAKVGGTFICVSGAIL 190 (424)
Q Consensus 131 ~~~~al~~~~~~~a~ii~~-l~Pi~~~lla~l----~l~e~~~~~~~~~~~~~~g~~l~i~Gv~l 190 (424)
+.....+..+++.+..+.- -+-+...++..+ .-+++++..+ ++|+++.++|+.+
T Consensus 80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRR------ILGLALMIAGVIL 138 (138)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHH------HHHHHHHHHHHhC
Confidence 8888899999998887754 444444555553 3468888888 9999999999864
No 81
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.17 E-value=0.0016 Score=52.33 Aligned_cols=65 Identities=18% Similarity=0.314 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHhhccChh-hHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506 314 ASAVNYGLITWSNKILGPA-LVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV 378 (424)
Q Consensus 314 ~~~~~~~l~~~a~~~~~~~-~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~ 378 (424)
+..++|.+...++|+.+.. ..++..-.-.+.+.+.++++|+|+.++.+++|+.++++|++.....
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 4567889999999998874 4577777888889999999999999999999999999999977543
No 82
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.16 E-value=0.001 Score=53.52 Aligned_cols=65 Identities=25% Similarity=0.160 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHhhccCcchhhhc-ccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506 122 LTGIFGNQLLFLLGLSYTNPTYAAAI-QPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV 192 (424)
Q Consensus 122 ~lg~~~~~~~~~~al~~~~~~~a~ii-~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~ 192 (424)
+.+...++.+...|+++.|.+.+..+ ...-.+.+.+.++++++|+++..+ ++++.+.+.|++.+-
T Consensus 37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk 102 (106)
T COG2076 37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhh
Confidence 33378899999999999999999877 578999999999999999999999 999999999999885
No 83
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.14 E-value=0.0027 Score=51.50 Aligned_cols=66 Identities=23% Similarity=0.371 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHhhccChh-hHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeee
Q 039506 312 IIASAVNYGLITWSNKILGPA-LVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTW 377 (424)
Q Consensus 312 ~~~~~~~~~l~~~a~~~~~~~-~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~ 377 (424)
+++..+++.+...++|+.|.. ..++..-+-.+.+.+.+++++||++++.+++|+.++++|++....
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 345677889999999999874 456666688889999999999999999999999999999998753
No 84
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.11 E-value=0.0073 Score=49.25 Aligned_cols=64 Identities=20% Similarity=0.282 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHhhccChhh-HhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506 313 IASAVNYGLITWSNKILGPAL-VALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT 376 (424)
Q Consensus 313 ~~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~ 376 (424)
++..+++.+...++|++|... .++..-+-.+.+.+.+++++||++++.+++|+.++++|++...
T Consensus 43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 345778899999999998754 5666667788889999999999999999999999999998753
No 85
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=97.11 E-value=0.0045 Score=60.24 Aligned_cols=145 Identities=17% Similarity=0.160 Sum_probs=110.4
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHHhhcc---cccCcCCHHHHHHH
Q 039506 44 MEREVLRAHGAMALVQLFYGGYHVITKVALNVG---VNQLVFCVFRDLLALSILAPIAYFREK---RTRLPMTRRLLMSF 117 (424)
Q Consensus 44 ~~~~~~~~~~~~l~a~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~ 117 (424)
...+...|-++.+++++++|.+.++.|.-.+.+ ++-..+.-+--++..++++|..+.-.. ....-++..+....
T Consensus 241 ~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~v 320 (416)
T KOG2765|consen 241 PASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLV 320 (416)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEee
Confidence 334568999999999999999999999876432 443333333344556666654443222 11112234455567
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhc
Q 039506 118 FFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLF 194 (424)
Q Consensus 118 l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~ 194 (424)
+..+..|.+++.++|..|.-.+++-.+++-..++.-..++.-.++.+.++++.. ++|.+..+.|-+++...
T Consensus 321 v~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~------iiGsi~Ifv~Fv~vn~~ 391 (416)
T KOG2765|consen 321 VFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY------IIGSIPIFVGFVIVNIS 391 (416)
T ss_pred eHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHhheecc
Confidence 788899999999999999999999999999998888899999999999999999 99999999999998753
No 86
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.09 E-value=0.0018 Score=52.47 Aligned_cols=65 Identities=14% Similarity=0.032 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHhhccCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506 122 LTGIFGNQLLFLLGLSYTNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV 192 (424)
Q Consensus 122 ~lg~~~~~~~~~~al~~~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~ 192 (424)
+.+...++++...++++.|.+.+-.+. ..-.+.+.+.+++++||++++.+ ++|+.+.+.|++.+-
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhh
Confidence 444788999999999999999998775 59999999999999999999999 999999999999884
No 87
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.87 E-value=0.0028 Score=51.85 Aligned_cols=110 Identities=19% Similarity=0.249 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039506 56 ALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLG 135 (424)
Q Consensus 56 l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~a 135 (424)
++..++||...++.|...+. .++..-.. |..-.... .. .+++... ..+-+-.+...|+..
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-----Ll--------~n~~y~i-----pf~lNq~GSv~f~~~ 61 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-----LL--------LNPKYII-----PFLLNQSGSVLFFLL 61 (113)
T ss_pred eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-----HH--------HhHHHHH-----HHHHHHHHHHHHHHH
Confidence 45678999999999998763 44333221 32111111 00 0222211 222245566888999
Q ss_pred hhccCcchhhhc-ccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhh
Q 039506 136 LSYTNPTYAAAI-QPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILM 191 (424)
Q Consensus 136 l~~~~~~~a~ii-~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li 191 (424)
+...+.+.+..+ +++.=++|++.++++.+|..+++. ++|+++.+.|+.++
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVALC 112 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeeee
Confidence 999999999998 589999999999998888888888 99999999998765
No 88
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.83 E-value=0.051 Score=53.53 Aligned_cols=144 Identities=11% Similarity=0.120 Sum_probs=91.3
Q ss_pred hHHHHHHHHHHHHHHHHHH-------HHHHHHhhcCCChHHHHHHHHH---HHHHHHH-HHHHh---hcccc----cCcC
Q 039506 48 VLRAHGAMALVQLFYGGYH-------VITKVALNVGVNQLVFCVFRDL---LALSILA-PIAYF---REKRT----RLPM 109 (424)
Q Consensus 48 ~~~~~~~~l~a~~~~~~~~-------~~~k~~~~~~~~~~~~~~~r~~---~~~l~l~-~~~~~---~~~~~----~~~~ 109 (424)
..+++..++++.+..++.. +..+...+.|.++.....-.+. .+..+.- +++.+ ++++. .+..
T Consensus 172 ~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~ 251 (345)
T PRK13499 172 LKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSL 251 (345)
T ss_pred hHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccc
Confidence 4578889999999988888 6666554456777666555554 3333332 22232 21211 1111
Q ss_pred C----HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhh---cc-cchHHHHHHHHHHHhhcccccccccccchhhHH
Q 039506 110 T----RRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAA---IQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGT 181 (424)
Q Consensus 110 ~----~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~i---i~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~ 181 (424)
+ .+......+.|++ ....+.++..|-+..+.+.+.. +. .+..++..+-+. ++||+=+..+++.+.-++|+
T Consensus 252 ~~~~~~~n~l~~~l~G~~-W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~ 329 (345)
T PRK13499 252 AKPLLITNVLLSALAGVM-WYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGC 329 (345)
T ss_pred cchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHH
Confidence 2 2333333666666 6788888888888886665554 55 566677777777 58998764444566668999
Q ss_pred HHHHHhHhhhhh
Q 039506 182 FICVSGAILMVL 193 (424)
Q Consensus 182 ~l~i~Gv~li~~ 193 (424)
++.++|++++..
T Consensus 330 vliI~g~~lig~ 341 (345)
T PRK13499 330 VVIILAANIVGL 341 (345)
T ss_pred HHHHHHHHHHhh
Confidence 999999988864
No 89
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.70 E-value=0.011 Score=55.55 Aligned_cols=80 Identities=16% Similarity=0.195 Sum_probs=68.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeeccc
Q 039506 302 SELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYR 381 (424)
Q Consensus 302 ~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~~ 381 (424)
+....+..=++ ...+...+.+.++++.+++...++..+..+++.++++++++.+.+..||++..+.++|+.+.......
T Consensus 15 ~~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 15 KDTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 34444444444 35667788999999999999999999999999999999999999999999999999999998876554
Q ss_pred c
Q 039506 382 E 382 (424)
Q Consensus 382 ~ 382 (424)
.
T Consensus 94 ~ 94 (244)
T PF04142_consen 94 S 94 (244)
T ss_pred c
Confidence 4
No 90
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.69 E-value=0.013 Score=46.42 Aligned_cols=55 Identities=20% Similarity=0.324 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHhhccChhhH-hhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHH
Q 039506 314 ASAVNYGLITWSNKILGPALV-ALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLI 368 (424)
Q Consensus 314 ~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~li 368 (424)
+..+++.++.+++|+.+.+.+ ++..-+..+.+.+.+.+++||++|+.+++|+.+|
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 567788999999999998877 5556688999999999999999999999999885
No 91
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.64 E-value=0.0054 Score=57.71 Aligned_cols=135 Identities=10% Similarity=0.021 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHH
Q 039506 240 GVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNY 319 (424)
Q Consensus 240 G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 319 (424)
|.+.+++|+++++...+=.|+.... | ++...++++....+...+..+..+ .+..++ + ..+|...=+.+.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g-D-g~~fQw~~~~~i~~~g~~v~~~~~-~p~f~p-------~-amlgG~lW~~gN 69 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG-D-GFFFQWVMCSGIFLVGLVVNLILG-FPPFYP-------W-AMLGGALWATGN 69 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC-C-cHHHHHHHHHHHHHHHHHHHHhcC-CCccee-------H-HHhhhhhhhcCc
Confidence 4678899999999999988876533 4 567777777666655555555443 111111 1 111211223344
Q ss_pred HHHHHHhhccChhhHhhh-cchhHHHHHHHHHH-HcCCCc-----chhhHHHHHHHHHhhheeeeecccccCC
Q 039506 320 GLITWSNKILGPALVALY-NPLQPAASAFLSKI-FLGSPI-----YLGSVLGGCLIIAGLYMVTWVSYRERQA 385 (424)
Q Consensus 320 ~l~~~a~~~~~~~~~s~~-~~~~pi~~~l~~~l-~~~e~~-----~~~~~lG~~lii~g~~l~~~~~~~~~~~ 385 (424)
.+-.-.+|.++-+..-++ ...+.+.+...+-+ +||+.+ ++..++|++++++|..+....|.+.+++
T Consensus 70 ~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~ 142 (254)
T PF07857_consen 70 ILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKEP 142 (254)
T ss_pred eeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCCc
Confidence 445555666665544433 33355666666543 455433 5678899999999999988776655433
No 92
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.63 E-value=0.0058 Score=59.34 Aligned_cols=139 Identities=14% Similarity=0.151 Sum_probs=111.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHh---hcCCChHHHHHHHHHHHHHHHH-HHHHhhccccc-----CcCCHHHHHHH
Q 039506 47 EVLRAHGAMALVQLFYGGYHVITKVAL---NVGVNQLVFCVFRDLLALSILA-PIAYFREKRTR-----LPMTRRLLMSF 117 (424)
Q Consensus 47 ~~~~~~~~~l~a~~~~~~~~~~~k~~~---~~~~~~~~~~~~r~~~~~l~l~-~~~~~~~~~~~-----~~~~~~~~~~~ 117 (424)
-++.|....+.+.+..+...++.|... +..+++.....+..-++.++++ |+......... ...+... ..+
T Consensus 160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~-~~~ 238 (316)
T KOG1441|consen 160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTF-LIL 238 (316)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhh-HHH
Confidence 357899999999999999999999988 3358899988888888888888 87665443222 1223333 333
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506 118 FFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL 193 (424)
Q Consensus 118 l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~ 193 (424)
+...++ ..+.+...+..+.+++|-..++....--+++...++++++++++..+ ..|.+++++|+.+-..
T Consensus 239 ~~~sv~-~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 239 LLNSVL-AFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHH-HHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHHHH
Confidence 444466 67778888999999999999999888888888899999999999999 9999999999998864
No 93
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.50 E-value=0.0021 Score=59.09 Aligned_cols=133 Identities=11% Similarity=0.106 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHH
Q 039506 240 GVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNY 319 (424)
Q Consensus 240 G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 319 (424)
..+++|+=++.|+..-.+..|...+ |.+.+.-+.+.+.++.+...++.. ...+...+..-+..|++- .+++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG~---p~qQ~lGtT~GALifaiiv~~~~~-----p~~T~~~~iv~~isG~~W-s~GQ 73 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGGK---PYQQTLGTTLGALIFAIIVFLFVS-----PELTLTIFIVGFISGAFW-SFGQ 73 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCCC---hhHhhhhccHHHHHHHHHHheeec-----CccchhhHHHHHHhhhHh-hhhh
Confidence 4578889999999887776665333 455555555555555444444422 112355566656666654 4588
Q ss_pred HHHHHHhhccChhhHhhhcc-hhHHHHHHHHHHHcCCCcchhhH----HHHHHHHHhhheeeeeccc
Q 039506 320 GLITWSNKILGPALVALYNP-LQPAASAFLSKIFLGSPIYLGSV----LGGCLIIAGLYMVTWVSYR 381 (424)
Q Consensus 320 ~l~~~a~~~~~~~~~s~~~~-~~pi~~~l~~~l~~~e~~~~~~~----lG~~lii~g~~l~~~~~~~ 381 (424)
...+++++..+.+++.++.. ++-+-+.+++++.|||..+..+. +.+++++.|+++..+.++.
T Consensus 74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~ 140 (288)
T COG4975 74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN 140 (288)
T ss_pred hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc
Confidence 89999999999999998876 56677789999999999987765 4677888999888776553
No 94
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.33 E-value=0.024 Score=46.38 Aligned_cols=109 Identities=13% Similarity=0.010 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 039506 246 GNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWS 325 (424)
Q Consensus 246 ~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a 325 (424)
+-+++|++.+-+.|+..+..++.-.. . +..-.... ++. +++ .++ .......+-..|++.
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~~~~~~~~-----Ll~---------n~~---y~i--pf~lNq~GSv~f~~~ 61 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-QLLQEIKF-----LLL---------NPK---YII--PFLLNQSGSVLFFLL 61 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCCccch-H-HHHHHHHH-----HHH---------hHH---HHH--HHHHHHHHHHHHHHH
Confidence 45789999999999988877632222 1 21111111 110 111 111 222344566778899
Q ss_pred hhccChhhHhhh-cchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhhee
Q 039506 326 NKILGPALVALY-NPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMV 375 (424)
Q Consensus 326 ~~~~~~~~~s~~-~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~ 375 (424)
+.+.+-+.+.++ +.+.-+++.+.++++.+|..+...++|+++++.|+.+.
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 999999999888 58999999999988888888999999999999998764
No 95
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.13 E-value=0.013 Score=46.51 Aligned_cols=56 Identities=20% Similarity=0.004 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHhhccCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHH
Q 039506 122 LTGIFGNQLLFLLGLSYTNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFI 183 (424)
Q Consensus 122 ~lg~~~~~~~~~~al~~~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l 183 (424)
+.+...++.++..++++.|.+.+-.+. .+..+.+.+.+.+++||+++..+ +.|+.+
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l 92 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence 334788999999999999999997775 69999999999999999999999 988765
No 96
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=95.93 E-value=0.1 Score=49.15 Aligned_cols=200 Identities=10% Similarity=0.001 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHH
Q 039506 51 AHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQL 130 (424)
Q Consensus 51 ~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~ 130 (424)
|+++.+++++++|.+++-.|..-. -|++.+-++.+....+.-+++...++. .+..++.++.|.+ .+.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~--gDg~~fQw~~~~~i~~~g~~v~~~~~~-------p~f~p~amlgG~l-W~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDT--GDGFFFQWVMCSGIFLVGLVVNLILGF-------PPFYPWAMLGGAL-WATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccC--CCcHHHHHHHHHHHHHHHHHHHHhcCC-------CcceeHHHhhhhh-hhcCce
Confidence 467789999999999999997643 467666666666655555555554332 1223455666677 788888
Q ss_pred HHHHHhhccCcchhhhcccchHHHH-HHHHHH-HhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCC-
Q 039506 131 LFLLGLSYTNPTYAAAIQPSIPVFT-FLLAVM-MGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDF- 207 (424)
Q Consensus 131 ~~~~al~~~~~~~a~ii~~l~Pi~~-~lla~l-~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~- 207 (424)
+-.-.++..+.+....+..+.-+++ -.-+++ +++++..... -....++|++++++|..+...-+.+......+.+.
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~-~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~ 149 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPS-SPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET 149 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccc-hhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence 9999999999999999877643333 333332 3333221110 00112788888888888776544433111111100
Q ss_pred ccc----cccccCC-CCCCcccccccccccC-chhhHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 039506 208 VGE----NEVRVRG-QPEPVGWLLSNFIDIG-LDQWHLGVLCLIGNCMCMAAFIAIQAPILRKY 265 (424)
Q Consensus 208 ~~~----~~~~~~~-~p~~~~~~~~~~~~~~-~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~ 265 (424)
... .+.+++. ..++-.|- -+++ ..+...|..+++++++.|+...+=.....++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~S~v----d~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 150 PLSIEDVIEIEDDSENSEDSSWV----DELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred ccccccccccccccccccccccc----cccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence 000 1111110 00000110 0000 12467899999999999999887777665553
No 97
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.66 E-value=0.12 Score=49.18 Aligned_cols=141 Identities=11% Similarity=0.086 Sum_probs=113.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHHHHHhhccccc----CcCCHHHHHHHHHH
Q 039506 46 REVLRAHGAMALVQLFYGGYHVITKVALN-VGVNQLVFCVFRDLLALSILAPIAYFREKRTR----LPMTRRLLMSFFFL 120 (424)
Q Consensus 46 ~~~~~~~~~~l~a~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~l~~ 120 (424)
.+...|+.++....++=|..+..-..+.+ .++++..+++.-.++.++.-.......+.... ....+..++.+++.
T Consensus 168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred CCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHH
Confidence 45678999999999888888887776664 46889999999888888877776554433211 12356667788888
Q ss_pred HHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506 121 GLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL 193 (424)
Q Consensus 121 g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~ 193 (424)
+.+| +.++.+.+.-++.-++-.-+.|..+--++..+++.+.++.+++..| |.|+.+.+.|+.+=.+
T Consensus 248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q------~~g~~iVFg~i~l~~~ 313 (327)
T KOG1581|consen 248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQ------WLGVLIVFGGIFLEIL 313 (327)
T ss_pred HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhh------ccCeeeehHHHHHHHH
Confidence 9885 8888888889999888888889999999999999999999999999 9999999999877654
No 98
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.34 E-value=0.26 Score=42.39 Aligned_cols=136 Identities=13% Similarity=0.025 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHH
Q 039506 49 LRAHGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGN 128 (424)
Q Consensus 49 ~~~~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~ 128 (424)
...++..+.+..+-..+..+.-.+.+.--+|....+.-+..+.+++..+.+.+.+.......++.-++...-|++| +.+
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~~ 82 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AIF 82 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hhh
Confidence 4566677777777788887777777652348888999999998888888777444322222233334455556664 444
Q ss_pred HHHHHHHhhccCcchhhhc-ccchHHHHHHHHHHH-h---hcccccccccccchhhHHHHHHHhHhhh
Q 039506 129 QLLFLLGLSYTNPTYAAAI-QPSIPVFTFLLAVMM-G---TERVNLLTTEGQAKVGGTFICVSGAILM 191 (424)
Q Consensus 129 ~~~~~~al~~~~~~~a~ii-~~l~Pi~~~lla~l~-l---~e~~~~~~~~~~~~~~g~~l~i~Gv~li 191 (424)
-..-........++....+ ..-+-+...++..+= + +++++..+ ++|+++.++|+.++
T Consensus 83 vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r------~lgi~L~l~gil~~ 144 (150)
T COG3238 83 VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPR------ILGILLVLAGILLA 144 (150)
T ss_pred hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHH------HHHHHHHHHHHHHh
Confidence 4444555555555555444 344444444444431 1 36677777 99999999995554
No 99
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.07 E-value=0.013 Score=56.06 Aligned_cols=126 Identities=16% Similarity=0.203 Sum_probs=92.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHH
Q 039506 236 QWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIAS 315 (424)
Q Consensus 236 ~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 315 (424)
.+..|.++++.+.+..+...++.|+-.++... .. .-.++++...- ....|+ .|.+..
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~--------------~ra~~gg~~yl-~~~~Ww----~G~ltm 74 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SG--------------LRAGEGGYGYL-KEPLWW----AGMLTM 74 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHHHhh----hc--------------ccccCCCcchh-hhHHHH----HHHHHH
Confidence 45689999999999999999888887665431 00 00011111111 112232 355556
Q ss_pred HHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeecccccC
Q 039506 316 AVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRERQ 384 (424)
Q Consensus 316 ~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~~~~~ 384 (424)
.++-.+.+.|....+++.++++..++.+.+.+++..+++|+++....+|+++.++|..++.....++++
T Consensus 75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~ 143 (335)
T KOG2922|consen 75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQE 143 (335)
T ss_pred HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccc
Confidence 667777777888899999999999999999999999999999999999999999999988875544443
No 100
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=94.12 E-value=0.063 Score=47.87 Aligned_cols=63 Identities=19% Similarity=0.172 Sum_probs=58.2
Q ss_pred HHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeecc
Q 039506 318 NYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSY 380 (424)
Q Consensus 318 ~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~ 380 (424)
+..+|..++++++++.++.+...+..+..+++++.+++++...+++..++.+.|++++.+.+.
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN 128 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN 128 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence 445689999999999999999999999999999999999999999999999999999887543
No 101
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=94.05 E-value=1.8 Score=42.43 Aligned_cols=139 Identities=16% Similarity=0.092 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCC---cchhHHHHHHHHHHHHHHHHHHhcCC---Cccccc------chhHHHH
Q 039506 239 LGVLCLIGNCMCMAAFIAIQAPILRKYPS---SLSVTAYSYFFGAVLMVITAFFLTND---STEWSL------TQSELFA 306 (424)
Q Consensus 239 ~G~l~~l~a~l~~a~~~v~~k~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~------~~~~~~~ 306 (424)
.-.+..+...+.++......|...++.++ |.+..+..-+.-.+++....+..+.. ...-.. ++.+...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 44556666677777777777776555431 23444444455555555555544311 110011 1212222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506 307 VIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV 378 (424)
Q Consensus 307 l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~ 378 (424)
+..=+. ..++-.-+++.++.+.+++...+...+....+.++..++++++.+.+||...++.+.|+.+.+..
T Consensus 95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~ 165 (345)
T KOG2234|consen 95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP 165 (345)
T ss_pred HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 222222 24445568999999999999999999999999999999999999999999999999999998843
No 102
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.92 E-value=0.72 Score=42.48 Aligned_cols=159 Identities=14% Similarity=0.106 Sum_probs=106.7
Q ss_pred hhhhhhheeecccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChHHHHHHHHHHHHHH
Q 039506 15 FGFLVYFFIEAKQRTLHDETKNFKIKSLSMEREVLRAHGAMALVQLFYGGYHVITKVALN-VGVNQLVFCVFRDLLALSI 93 (424)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~ 93 (424)
.|+-..-+-|.|-.+.+|++ ...|-++++++..+-|.........-. +.-+...+++.-.+.+.+.
T Consensus 150 ~GValFmYK~~Kv~g~e~~t-------------~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~ 216 (337)
T KOG1580|consen 150 VGVALFMYKENKVGGAEDKT-------------FGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLY 216 (337)
T ss_pred HHHHHhhccccccCCCcccc-------------cchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHH
Confidence 45555555555555544433 346667777777777776665443322 1123445555555555555
Q ss_pred HHHHHHhhcccc----cCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhccccc
Q 039506 94 LAPIAYFREKRT----RLPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNL 169 (424)
Q Consensus 94 l~~~~~~~~~~~----~~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~ 169 (424)
+-.-+.+.+.-. .....+..|+.+...++. ..+++.+.+.-..+-+|-..+++..+--.|+++.+.++++..++.
T Consensus 217 Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~-s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~ 295 (337)
T KOG1580|consen 217 LGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIA-SCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSG 295 (337)
T ss_pred hhhhheehhhHHHHHHHHHhccHHHHHHHHHHHH-HHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcH
Confidence 544333332200 001123455667777877 477888999999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHHHhHhhhhh
Q 039506 170 LTTEGQAKVGGTFICVSGAILMVL 193 (424)
Q Consensus 170 ~~~~~~~~~~g~~l~i~Gv~li~~ 193 (424)
+| |.|..+.+.|..+=..
T Consensus 296 rQ------wlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 296 RQ------WLGTVLVFSALTADVV 313 (337)
T ss_pred HH------HHHHHHHHHHhhhHhh
Confidence 99 9999999999877653
No 103
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=93.78 E-value=0.22 Score=45.97 Aligned_cols=60 Identities=13% Similarity=0.114 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhh
Q 039506 125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAIL 190 (424)
Q Consensus 125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~l 190 (424)
.+....+....+++.++...+....+.++++.+++.++++|+++..+ +.|..+.+.|+.+
T Consensus 162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~------~~g~~lV~~~~~l 221 (222)
T TIGR00803 162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTF------YLGAILVFLATFL 221 (222)
T ss_pred HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHeeeEe
Confidence 45566778889999999999999999999999999999999999999 9999999888653
No 104
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.39 E-value=4.7 Score=38.95 Aligned_cols=134 Identities=13% Similarity=0.104 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCcchh--HHHHHHHHHHHHHHHHHHhcCCCccccc-chhHHHHHHHHHHHHHHH
Q 039506 241 VLCLIGNCMCMAAFIAIQAPILRKYPSSLSV--TAYSYFFGAVLMVITAFFLTNDSTEWSL-TQSELFAVIYAGIIASAV 317 (424)
Q Consensus 241 ~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~l~~~g~~~~~~ 317 (424)
...++.=+++-.+-.++.|.....++-|... ..++.+.+.+.+...-...--+..+++. ..+-|..+-.+- ..
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf----~~ 89 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLF----VG 89 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHH----HH
Confidence 3444444455555566677777766633344 4478887777666655432222222222 223333222111 11
Q ss_pred HHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506 318 NYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV 378 (424)
Q Consensus 318 ~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~ 378 (424)
....-.+++|+++.....++....|+++.+...+++|.+++...+....++++|.......
T Consensus 90 ~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~ 150 (314)
T KOG1444|consen 90 MLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFT 150 (314)
T ss_pred HHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccc
Confidence 2233456789999999999999999999999999999999999999999999998876543
No 105
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=91.01 E-value=1.8 Score=42.31 Aligned_cols=143 Identities=15% Similarity=0.147 Sum_probs=86.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHH-HHHHHHHHHHHHHHHhcCCCccc---c-cchhHHHHHHHH
Q 039506 236 QWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAY-SYFFGAVLMVITAFFLTNDSTEW---S-LTQSELFAVIYA 310 (424)
Q Consensus 236 ~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~---~-~~~~~~~~l~~~ 310 (424)
+...|+++..+++++-+.+.+=.||. |+.+ ....+. +.+++.+ ..|.......-+..+ . .+...+......
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws--WEs~Wlv~gi~swl-i~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~ 79 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS--WESYWLVQGIFSWL-IVPWLWALLAIPDFFSIYSATPASTLFWTFLF 79 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhc-CCcc--HHHHHHHHHHHHHH-HHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence 56799999999999999999998885 4444 222222 2333332 233332211111111 1 134566666667
Q ss_pred HHHHHHHHHHHHHHHhhccChhhH-hhhcchhHHHHHHHHHHHcCC-------CcchhhHHHHHHHHHhhheeeeecccc
Q 039506 311 GIIASAVNYGLITWSNKILGPALV-ALYNPLQPAASAFLSKIFLGS-------PIYLGSVLGGCLIIAGLYMVTWVSYRE 382 (424)
Q Consensus 311 g~~~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pi~~~l~~~l~~~e-------~~~~~~~lG~~lii~g~~l~~~~~~~~ 382 (424)
|++- .++-..|-.++|+++.+.. ++..-+..+++.++-.++.|+ .-....++|.++.++|+.+..+....+
T Consensus 80 G~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K 158 (344)
T PF06379_consen 80 GVLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK 158 (344)
T ss_pred HHHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence 7764 4466668999999987654 334445555666665555332 223467889999999999887654433
Q ss_pred c
Q 039506 383 R 383 (424)
Q Consensus 383 ~ 383 (424)
+
T Consensus 159 e 159 (344)
T PF06379_consen 159 E 159 (344)
T ss_pred h
Confidence 3
No 106
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=88.74 E-value=2.3 Score=40.90 Aligned_cols=121 Identities=18% Similarity=0.204 Sum_probs=85.5
Q ss_pred HHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCc--ccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhh
Q 039506 259 APILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDST--EWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVAL 336 (424)
Q Consensus 259 k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~ 336 (424)
+...++.+-|+.++.++..+-...............+ ....++.....-+.-..+++++-..+-++++++++.+..++
T Consensus 36 ~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM 115 (349)
T KOG1443|consen 36 KWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTM 115 (349)
T ss_pred hhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeee
Confidence 3334445555666666665554444333333332111 11234444444344444578888899999999999999999
Q ss_pred hcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeec
Q 039506 337 YNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVS 379 (424)
Q Consensus 337 ~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~ 379 (424)
.-+..+++..+++.++-=|++.+.-.+=..+|-+|+++.++..
T Consensus 116 ~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks 158 (349)
T KOG1443|consen 116 TKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS 158 (349)
T ss_pred ccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence 9999999999999998889999999998999999999888754
No 107
>PRK02237 hypothetical protein; Provisional
Probab=84.00 E-value=6.2 Score=31.84 Aligned_cols=47 Identities=15% Similarity=0.171 Sum_probs=39.8
Q ss_pred HhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeecc
Q 039506 334 VALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSY 380 (424)
Q Consensus 334 ~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~ 380 (424)
.+...-...+.++++.+.+=|.+|+...++|..++++|+.++.+.++
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 45566667788899999999999999999999999999988766543
No 108
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=83.86 E-value=2.6 Score=39.99 Aligned_cols=65 Identities=15% Similarity=0.140 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506 314 ASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV 378 (424)
Q Consensus 314 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~ 378 (424)
|-..+-.+.+.++...+++...++.-...+++-+++.-+++.+++..+|+|+..+.+|.+.+-..
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 44556667788888999999999999999999999999999999999999999999999987655
No 109
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=83.83 E-value=1.4 Score=41.58 Aligned_cols=143 Identities=15% Similarity=0.069 Sum_probs=98.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHHHHHhhcccc----cCc-CCHHHHHHHHHH
Q 039506 47 EVLRAHGAMALVQLFYGGYHVITKVALNV-GVNQLVFCVFRDLLALSILAPIAYFREKRT----RLP-MTRRLLMSFFFL 120 (424)
Q Consensus 47 ~~~~~~~~~l~a~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~----~~~-~~~~~~~~~l~~ 120 (424)
-.+.|.++.+.+.+.-+.+.+.+|..... +---+.++++..+.+.++++|++...+.-. .+. ...+.|..+.+.
T Consensus 182 ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLs 261 (347)
T KOG1442|consen 182 LSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLS 261 (347)
T ss_pred cchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHH
Confidence 35789999999999999999999976542 223567789999999999999988865521 112 245666677777
Q ss_pred HHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccC
Q 039506 121 GLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRG 196 (424)
Q Consensus 121 g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~ 196 (424)
|++|++.++... +=++-++|-.--+--..-...-.+++..+++|.-+... |-+-++.+.|...-++-++
T Consensus 262 glfgF~mgyvTg-~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lw------wtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 262 GLFGFAMGYVTG-WQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLW------WTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred HHHHHHhhheee-EEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhhe------eeeeEEEEehhHHHHHHHH
Confidence 777655554322 12333433322222223344556788899999998888 9999999999888776443
No 110
>PRK02237 hypothetical protein; Provisional
Probab=83.66 E-value=8.7 Score=31.04 Aligned_cols=53 Identities=15% Similarity=0.076 Sum_probs=40.1
Q ss_pred Hhhc-cCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506 135 GLSY-TNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL 193 (424)
Q Consensus 135 al~~-~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~ 193 (424)
.++- ...+.+-.-+ ....+...+-.+.+.++|+++.+ ++|..++++|+.++.+
T Consensus 51 Tl~p~~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D------~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 51 TLQPDAAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWD------WIGAAICLVGMAVIMY 105 (109)
T ss_pred hcCCchhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhH------HHhHHHHHHhHHHhee
Confidence 3443 3344444433 46667777888999999999999 9999999999999874
No 111
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=82.77 E-value=21 Score=28.78 Aligned_cols=110 Identities=20% Similarity=0.301 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCC------hHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHH
Q 039506 55 MALVQLFYGGYHVITKVALNVGVN------QLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGN 128 (424)
Q Consensus 55 ~l~a~~~~~~~~~~~k~~~~~~~~------~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~ 128 (424)
++...++||....+.|.... +.+ .....++|-.-.. ..+++.+. -+.+. -.+
T Consensus 8 lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~tl----------------~l~w~Y~i-PFllN----qcg 65 (125)
T KOG4831|consen 8 LVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKTL----------------FLNWEYLI-PFLLN----QCG 65 (125)
T ss_pred HHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHHH----------------HHhHHHHH-HHHHH----Hhh
Confidence 67788999999999998763 122 1222222221111 11222221 12223 334
Q ss_pred HHHHHHHhhccCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506 129 QLLFLLGLSYTNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV 192 (424)
Q Consensus 129 ~~~~~~al~~~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~ 192 (424)
..+||.-+++.+.+.+..+. ++.-.|+.+.+..+..|....+. +.|..+..+|+.+..
T Consensus 66 Saly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a------~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 66 SALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLA------LLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhcccccccee------ehhhhHHhhhhhhee
Confidence 47788889999999999885 57888899888877555555555 899999999987764
No 112
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=82.33 E-value=5.4 Score=36.62 Aligned_cols=137 Identities=15% Similarity=0.159 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHHHHHhhcccccC----cCCHHHHHHHHHHHHHH
Q 039506 50 RAHGAMALVQLFYGGYHVITKVALN-VGVNQLVFCVFRDLLALSILAPIAYFREKRTRL----PMTRRLLMSFFFLGLTG 124 (424)
Q Consensus 50 ~~~~~~l~a~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~----~~~~~~~~~~l~~g~lg 124 (424)
.|++++..-++.-+..-...|.-.+ .+...++.+++..+.+..+++.+....+.+... ..+.......++.|++
T Consensus 155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~- 233 (309)
T COG5070 155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLC- 233 (309)
T ss_pred CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHH-
Confidence 3555555555555555555554433 235678889999999999888877665442211 1223334456667777
Q ss_pred HHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506 125 IFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL 193 (424)
Q Consensus 125 ~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~ 193 (424)
-++-.++--+.++-++....+.+-.+.-.-.++.+.++++|+.++.. +.++++.+...++-.+
T Consensus 234 svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~s------i~sillGflsg~iYav 296 (309)
T COG5070 234 SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLS------IFSILLGFLSGAIYAV 296 (309)
T ss_pred HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHH------HHHHHHHHHHHHHHHH
Confidence 46666777788888998888998888888899999999999999999 9999998887777664
No 113
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=80.30 E-value=7.7 Score=31.26 Aligned_cols=55 Identities=20% Similarity=0.207 Sum_probs=42.7
Q ss_pred HHHhhccCcchhhhcc-cchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506 133 LLGLSYTNPTYAAAIQ-PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL 193 (424)
Q Consensus 133 ~~al~~~~~~~a~ii~-~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~ 193 (424)
...++-.+.+.+-.-+ ....+...+-.+.+.++|+++.+ ++|..++++|+.++.+
T Consensus 48 l~Tl~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D------~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 48 LLTLQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWD------WIGAAICLVGVAIILF 103 (107)
T ss_pred HhhcCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHH------HHhHHHHHHhHHheEe
Confidence 3345555555554443 57777888888999999999999 9999999999999974
No 114
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=77.99 E-value=4.7 Score=32.47 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=38.9
Q ss_pred hhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeecc
Q 039506 335 ALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSY 380 (424)
Q Consensus 335 s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~ 380 (424)
+...-...+.++++.+.+=+++|+...++|..++++|+.++.+.+|
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 4455556678899999999999999999999999999998887654
No 115
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=75.85 E-value=17 Score=29.06 Aligned_cols=48 Identities=19% Similarity=0.135 Sum_probs=40.3
Q ss_pred hHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeecc
Q 039506 333 LVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSY 380 (424)
Q Consensus 333 ~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~ 380 (424)
..+...-...+.+.++.+..=+.+|+.+.++|..+.++|+.++...++
T Consensus 60 vYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 60 VYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 345566677888999999999999999999999999999888777643
No 116
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=73.79 E-value=1.1 Score=42.39 Aligned_cols=26 Identities=4% Similarity=0.004 Sum_probs=0.0
Q ss_pred HHHHhhcccccccccccchhhHHHHHHHhHhh
Q 039506 159 AVMMGTERVNLLTTEGQAKVGGTFICVSGAIL 190 (424)
Q Consensus 159 a~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~l 190 (424)
-++|.|+-+-+.. ..++++.++-..+
T Consensus 69 ImlF~RrLLCPLG------lLCiilimi~lLv 94 (381)
T PF05297_consen 69 IMLFKRRLLCPLG------LLCIILIMIVLLV 94 (381)
T ss_dssp --------------------------------
T ss_pred HHHHHHhhcCcch------HHHHHHHHHHHHH
Confidence 3344444455555 5555554444433
No 117
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=73.76 E-value=16 Score=34.65 Aligned_cols=112 Identities=13% Similarity=0.123 Sum_probs=80.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhccccc-----CcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccch
Q 039506 77 VNQLVFCVFRDLLALSILAPIAYFREKRTR-----LPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSI 151 (424)
Q Consensus 77 ~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-----~~~~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~ 151 (424)
-+..+++++-+.++.++++..+...+.-.. ...+.+.....++.+..| .++......=++.-++..++.+...-
T Consensus 218 ~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~g-ylG~~~VLalI~~fGA~~aatvTTaR 296 (367)
T KOG1582|consen 218 ASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAG-YLGIVFVLALIKLFGALIAATVTTAR 296 (367)
T ss_pred CCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHh-HhhHHHHHHHHHHhchhHHHHHHHhH
Confidence 356677888888888888877776554211 123455555556555553 44444444445567788888888888
Q ss_pred HHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhcc
Q 039506 152 PVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFR 195 (424)
Q Consensus 152 Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~ 195 (424)
-..+.+++++++.++++... .-+..+.+.|+++=++.+
T Consensus 297 KavTi~lSfllFsKPfT~qy------~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 297 KAVTILLSFLLFSKPFTEQY------VWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred hHHHHHHHHHHHcCchHHHH------hhhhHHHHHHHHhhcccC
Confidence 88999999999999999888 888889999999888654
No 118
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=73.40 E-value=1.6 Score=40.84 Aligned_cols=111 Identities=15% Similarity=0.127 Sum_probs=78.2
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHH
Q 039506 265 YPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAA 344 (424)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~ 344 (424)
.+.|....+..+..-+++-.+...+.. .... .-|-.-+.++.+ -+=+..+..+|.++.+.+.+.++..-..+.
T Consensus 45 iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~~~~---~~~~hYilla~~-DVEaNy~vV~AyQyTsmtSi~lLDcwaip~ 117 (336)
T KOG2766|consen 45 INAPTSQTFLNYVLLALVYGPIMLFRR---KYIK---AKWRHYILLAFV-DVEANYFVVKAYQYTSMTSIMLLDCWAIPC 117 (336)
T ss_pred CCCccHHHHHHHHHHHHHHhhHHHhhh---HHHH---HHHHHhhheeEE-eecccEEEeeehhhcchHHHHHHHHhhhHH
Confidence 444556666666555555555555432 1111 122223333432 344555677889999999999999999999
Q ss_pred HHHHHHHHcCCCcchhhHHHHHHHHHhhheeeeecccc
Q 039506 345 SAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWVSYRE 382 (424)
Q Consensus 345 ~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~~~~~ 382 (424)
..+++|++++.+-.+.++.|.++.++|++++...+-..
T Consensus 118 v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~a 155 (336)
T KOG2766|consen 118 VLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHA 155 (336)
T ss_pred HHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecc
Confidence 99999999999999999999999999999988765433
No 119
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=72.12 E-value=2.1 Score=41.10 Aligned_cols=129 Identities=13% Similarity=0.095 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCC--------Cc---cccc-chhHHHHHHHHHH
Q 039506 245 IGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTND--------ST---EWSL-TQSELFAVIYAGI 312 (424)
Q Consensus 245 l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--------~~---~~~~-~~~~~~~l~~~g~ 312 (424)
+++.+||+..-...|...++... .+...|-+.++.++..++..++-+. +. +..+ ++..+.. ...|.
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~-~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~-A~aGG 79 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRL-PQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLF-AMAGG 79 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCc-cceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHH-HHHhh
Confidence 46788898888888887766552 2345555555554443333322111 10 1111 2233333 33444
Q ss_pred HHHHHHHHHHHHHhhccChhhHhhhcc-hhHHHHHHHHHHHcCCCcch--hhHHHHHHHHHhhheee
Q 039506 313 IASAVNYGLITWSNKILGPALVALYNP-LQPAASAFLSKIFLGSPIYL--GSVLGGCLIIAGLYMVT 376 (424)
Q Consensus 313 ~~~~~~~~l~~~a~~~~~~~~~s~~~~-~~pi~~~l~~~l~~~e~~~~--~~~lG~~lii~g~~l~~ 376 (424)
+..-++..+..+++...+.+.+-++.. +..+.++++.++ ++.+.+. .-+.|..++++++++-.
T Consensus 80 vvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 80 VVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred HhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence 456668888888888887766555443 233445555543 4555553 44568888888887644
No 120
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=71.17 E-value=1.6e+02 Score=31.88 Aligned_cols=20 Identities=15% Similarity=0.178 Sum_probs=9.3
Q ss_pred cchHHHH-HHHHHHHhhcccc
Q 039506 149 PSIPVFT-FLLAVMMGTERVN 168 (424)
Q Consensus 149 ~l~Pi~~-~lla~l~l~e~~~ 168 (424)
.+.|.+. ..+..++.++|+.
T Consensus 336 ~l~p~a~~~~l~~~lv~~r~~ 356 (700)
T COG1480 336 LLVPPALGPMLLILLVFLRIA 356 (700)
T ss_pred hccchHHHHHHHHHHHHhhHH
Confidence 3344333 3333444566665
No 121
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=67.65 E-value=97 Score=28.12 Aligned_cols=30 Identities=7% Similarity=0.195 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCcchh
Q 039506 114 LMSFFFLGLTGIFGNQLLFLLGLSYTNPTYA 144 (424)
Q Consensus 114 ~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a 144 (424)
++..+..++. ..+.+...+.....+|+...
T Consensus 146 ~~k~~~~~~~-~~~~w~~~~~~~~~lp~~in 175 (206)
T PF06570_consen 146 WWKYILISVL-AMVLWIVIFVLTSFLPPVIN 175 (206)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHccccCC
Confidence 3344444444 24444455555555666544
No 122
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=67.65 E-value=92 Score=27.87 Aligned_cols=101 Identities=7% Similarity=0.039 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHH
Q 039506 52 HGAMALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLL 131 (424)
Q Consensus 52 ~~~~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~ 131 (424)
++..-+.+++-|.+..+.+.+.- .+-..+.......++.+...+...++.+.-...+... +..+....+ ..+-+..
T Consensus 102 Ll~lg~~aLlsgitaff~~nA~~--~GlItlll~a~vgGfamy~my~y~yr~~ad~sqr~~~-~K~~lv~~~-sm~lWi~ 177 (226)
T COG4858 102 LLFLGAMALLSGITAFFQKNAQV--YGLITLLLTAVVGGFAMYIMYYYAYRMRADNSQRPGT-WKYLLVAVL-SMLLWIA 177 (226)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcc--hhHHHHHHHHHhhhHHHHHHHHHHHHhhcccccCCch-HHHHHHHHH-HHHHHHH
Confidence 33344445556777777776543 4445555555555555555555444332211222222 333434444 2344444
Q ss_pred HHHHhhccCcchhhhcccchHHHHHHHH
Q 039506 132 FLLGLSYTNPTYAAAIQPSIPVFTFLLA 159 (424)
Q Consensus 132 ~~~al~~~~~~~a~ii~~l~Pi~~~lla 159 (424)
.+.+-..+|++..-. +.|+...+++
T Consensus 178 v~i~t~~lPtslN~~---L~pi~l~IiG 202 (226)
T COG4858 178 VMIATVFLPTSLNPQ---LPPIALTIIG 202 (226)
T ss_pred HHHHHhhCCCcCCcC---CchHHHHHHH
Confidence 456667777665433 3444444333
No 123
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=66.63 E-value=1.2e+02 Score=29.00 Aligned_cols=140 Identities=7% Similarity=0.009 Sum_probs=85.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHHHHH--------hhccc-c-cCc---CCHH
Q 039506 47 EVLRAHGAMALVQLFYGGYHVITKVALN-VGVNQLVFCVFRDLLALSILAPIAY--------FREKR-T-RLP---MTRR 112 (424)
Q Consensus 47 ~~~~~~~~~l~a~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~--------~~~~~-~-~~~---~~~~ 112 (424)
.-..|+.++.++.+.-+...+......+ +|-++-+.+++-.......++...- .+... . -+. .-+.
T Consensus 161 ~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~ 240 (330)
T KOG1583|consen 161 WWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPS 240 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccH
Confidence 3456777777777777777777766664 5667899999888777666553210 00000 0 000 1123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhh
Q 039506 113 LLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMV 192 (424)
Q Consensus 113 ~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~ 192 (424)
.|..++ ...+....+.-.-+.=-..++.-.++++..+--.+..+++.+.++..+++.. |+|.++.++|.++..
T Consensus 241 ~~~yLl-~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h------~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 241 MWVYLL-FNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWH------WLGAALVFFGTLLFA 313 (330)
T ss_pred HHHHHH-HHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHH------HHHHHHHHHHHHHHH
Confidence 333222 2222122222111211122344555667778888999999999999999999 999999999999887
Q ss_pred h
Q 039506 193 L 193 (424)
Q Consensus 193 ~ 193 (424)
.
T Consensus 314 ~ 314 (330)
T KOG1583|consen 314 N 314 (330)
T ss_pred H
Confidence 4
No 124
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=66.35 E-value=1.7e+02 Score=30.34 Aligned_cols=47 Identities=11% Similarity=0.095 Sum_probs=28.8
Q ss_pred HhhhcchhHHHHHHHHHHHcCC-----CcchhhHHHHHHHHHhhheeeeecc
Q 039506 334 VALYNPLQPAASAFLSKIFLGS-----PIYLGSVLGGCLIIAGLYMVTWVSY 380 (424)
Q Consensus 334 ~s~~~~~~pi~~~l~~~l~~~e-----~~~~~~~lG~~lii~g~~l~~~~~~ 380 (424)
..++..+.-+.=+++..+--++ .++..|++.+.++++|++++.+.++
T Consensus 226 f~lYli~Ygi~RF~iEflR~d~~~~~~gl~~~Q~lSl~~il~gl~~~~~~~~ 277 (460)
T PRK13108 226 FGFYVAFYCAGRFCVELLRDDPATLIAGIRINSFTSTFVFIGAVVYIILAPK 277 (460)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhhcCccHHHHHHHHHHHHHHHHHHHhhc
Confidence 3444444444444444332222 2688899999999999887765443
No 125
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=65.29 E-value=33 Score=27.53 Aligned_cols=40 Identities=13% Similarity=0.186 Sum_probs=33.9
Q ss_pred ccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhh
Q 039506 148 QPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVL 193 (424)
Q Consensus 148 ~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~ 193 (424)
-....+...+-.+.+-+.++++.+ ++|..++++|+.++.+
T Consensus 65 GGvyI~~sL~W~~~Vdg~~pdr~D------~~Ga~icl~G~~vil~ 104 (109)
T COG1742 65 GGVYIAASLAWLWVVDGVRPDRYD------WIGAAICLAGVAVILF 104 (109)
T ss_pred cchHHHHHHHHHHHHcCcCCcHHH------hhhHHHHHhceeeeEe
Confidence 346667777778888899999999 9999999999988874
No 126
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=62.57 E-value=1.6e+02 Score=29.24 Aligned_cols=18 Identities=17% Similarity=0.100 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 039506 304 LFAVIYAGIIASAVNYGL 321 (424)
Q Consensus 304 ~~~l~~~g~~~~~~~~~l 321 (424)
++.+...+.+...+++.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~ 79 (385)
T PF03547_consen 62 LWFIPVFAFIIFILGLLL 79 (385)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 333333333344444443
No 127
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=58.86 E-value=12 Score=30.05 Aligned_cols=59 Identities=19% Similarity=0.124 Sum_probs=45.3
Q ss_pred HHHHHHHHhhccChhhHhhhcc-hhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506 318 NYGLITWSNKILGPALVALYNP-LQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT 376 (424)
Q Consensus 318 ~~~l~~~a~~~~~~~~~s~~~~-~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~ 376 (424)
+-.+|+.-+.+.+-+.+..+.+ +.-+++.+.+..+-.|......++|..+++.|+.+..
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 3456777788888877776654 5677888888876667778889999999999987653
No 128
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=56.20 E-value=17 Score=29.23 Aligned_cols=31 Identities=23% Similarity=0.403 Sum_probs=26.2
Q ss_pred HHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506 346 AFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT 376 (424)
Q Consensus 346 ~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~ 376 (424)
..++++.++|++++..+.|.+++++++..+.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 3567789999999999999999998877653
No 129
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=52.45 E-value=8.5 Score=37.06 Aligned_cols=129 Identities=13% Similarity=0.086 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHhhcccc-------------cCcCCHHHHHHHHHHH
Q 039506 55 MALVQLFYGGYHVITKVALNVGVNQLVFCVFRDLLALSILAPIAYFREKRT-------------RLPMTRRLLMSFFFLG 121 (424)
Q Consensus 55 ~l~a~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~-------------~~~~~~~~~~~~l~~g 121 (424)
|+++.+|||.+....|++.+++- ..+...+-+.++.++..++..+.-... ....++......+.-|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~gR-~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERRGR-LPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhcCC-ccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 46788999999999999977533 223356666666555555543321111 1122455555556666
Q ss_pred HHHHHHHHHHHHHHhhccCcchhhhccc-chHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhh
Q 039506 122 LTGIFGNQLLFLLGLSYTNPTYAAAIQP-SIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAIL 190 (424)
Q Consensus 122 ~lg~~~~~~~~~~al~~~~~~~a~ii~~-l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~l 190 (424)
++ .-+++.+..+|+.+.+.+.+-.+.. +.-++...+-+ |+..|.++.. +-..|+.+.++.+++
T Consensus 80 vv-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NY-fld~~~n~a~----iLF~GV~cf~iAI~l 143 (336)
T PF07168_consen 80 VV-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNY-FLDPKINRAE----ILFPGVACFLIAIIL 143 (336)
T ss_pred Hh-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeee-eccCCCCCce----EEEccHHHHHHHHHH
Confidence 66 7888888999999998888877743 44344444444 3355555432 003455544444444
No 130
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=51.56 E-value=2.5e+02 Score=27.74 Aligned_cols=18 Identities=11% Similarity=0.071 Sum_probs=10.4
Q ss_pred chhhHHHHHHHHHhhhee
Q 039506 358 YLGSVLGGCLIIAGLYMV 375 (424)
Q Consensus 358 ~~~~~lG~~lii~g~~l~ 375 (424)
.....++.++.++++++.
T Consensus 369 ~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 369 PGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334556666666665554
No 131
>PRK11010 ampG muropeptide transporter; Validated
Probab=50.98 E-value=3e+02 Score=28.42 Aligned_cols=54 Identities=13% Similarity=0.134 Sum_probs=24.7
Q ss_pred HhhccChhhHhhhcchhHHHHHHH----HHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506 325 SNKILGPALVALYNPLQPAASAFL----SKIFLGSPIYLGSVLGGCLIIAGLYMVTWV 378 (424)
Q Consensus 325 a~~~~~~~~~s~~~~~~pi~~~l~----~~l~~~e~~~~~~~lG~~lii~g~~l~~~~ 378 (424)
.-++.+.+..+..+....+-..+. +++.-.--......+..++.+.|.++....
T Consensus 345 ~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 345 CNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666666655443333333 322211112333445555556665555433
No 132
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=49.22 E-value=3.4e+02 Score=28.55 Aligned_cols=17 Identities=12% Similarity=0.073 Sum_probs=8.9
Q ss_pred hhcchhHHHHHHHHHHH
Q 039506 336 LYNPLQPAASAFLSKIF 352 (424)
Q Consensus 336 ~~~~~~pi~~~l~~~l~ 352 (424)
......|+-+.+++.+.
T Consensus 351 ~~~g~~~lGsll~G~la 367 (524)
T PF05977_consen 351 VFFGGMPLGSLLWGFLA 367 (524)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33444555566666543
No 133
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=45.63 E-value=3.4e+02 Score=27.54 Aligned_cols=286 Identities=13% Similarity=0.079 Sum_probs=0.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhhcccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHH-------hhccCcchhhhcc
Q 039506 76 GVNQLVFCVFRDLLALSILAPIAYFREKRTRLPMTRRLLMSFFFLGLTGIFGNQLLFLLG-------LSYTNPTYAAAIQ 148 (424)
Q Consensus 76 ~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~~g~lg~~~~~~~~~~a-------l~~~~~~~a~ii~ 148 (424)
+.+.....+++..++.....+...-.-.|.+ .+.......+...+ .+.-..-+.++ +...+.+-...+-
T Consensus 89 ~~~~~~~~~fq~~Fa~~t~~I~sGavaeR~~---~~~~~v~~~~~~~~-vY~~~ahwvW~~~GwL~~lG~~DfAG~~vVH 164 (403)
T TIGR00836 89 TLPDLLFFLFQMMFAAIAATIISGAVAERMK---FSAYLLFSVLWTTL-VYPPVAHWVWGGGGWLYKLGVLDFAGGGVVH 164 (403)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhccc---HHHHHHHHHHHHHH-HHHhccceeecCCchhhccCcchhcCceeEe
Q ss_pred cchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCccccccc
Q 039506 149 PSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSN 228 (424)
Q Consensus 149 ~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 228 (424)
...-......++++.+++-+.. .+.+..--...++++|..++- +||.++|
T Consensus 165 ~~gG~~~L~~a~~LGpR~~r~~-~~~~~~~~n~~~~~lGt~lLw-----------------------------~gW~gFN 214 (403)
T TIGR00836 165 IVGGVAGLAAALVLGPRIGRFP-RPVAIRPHNVPLVVLGTFILW-----------------------------FGWFGFN 214 (403)
T ss_pred cchhHHHHHHHHHhcCCCCCCc-CcCCCCCCCHHHHHHHHHHHH-----------------------------HHHhccc
Q ss_pred cccc--CchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcCCCcccccchhHHHH
Q 039506 229 FIDI--GLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTNDSTEWSLTQSELFA 306 (424)
Q Consensus 229 ~~~~--~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 306 (424)
-... ..+......+=..+|+.+-++...+..+..++..+ .....-..+.+.+...+.+-..+ .+.
T Consensus 215 ~Gs~~~~~~~~~~a~~nT~lA~a~g~l~~~~~~~~~~gk~~-~~~~~nG~LAGLVaita~a~~v~------------p~~ 281 (403)
T TIGR00836 215 AGSALAANGTAAYAAVNTNLAAAAGGLTWLLIDWLKHGKPT-LLGACNGILAGLVAITPGCGVVT------------PWG 281 (403)
T ss_pred chhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-HHHHHhhhhhhheeecCCCCCCC------------HHH
Q ss_pred HHHHHHHHHHHHHHHHH---HHhhccChhhHhhhcchhHHHHHHHHHHHcCC---------------CcchhhHHHHHHH
Q 039506 307 VIYAGIIASAVNYGLIT---WSNKILGPALVALYNPLQPAASAFLSKIFLGS---------------PIYLGSVLGGCLI 368 (424)
Q Consensus 307 l~~~g~~~~~~~~~l~~---~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e---------------~~~~~~~lG~~li 368 (424)
.+.+|++++.+++.... +-.|.-++..+-.+=..-=+++.++.-++-.+ ..=..|++|++.+
T Consensus 282 A~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa~~~~~~~~~g~~~~~~~~~l~~Ql~g~~~~ 361 (403)
T TIGR00836 282 AIIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFAAPKVGGVGTGGLLGGNGKQLGVQLIGIAAI 361 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhcccccccccCCccccCcHHHHHHHHHHHHHH
Q ss_pred HHhhheeeeecccccCCCCCcccCCCCCCccccccccccc
Q 039506 369 IAGLYMVTWVSYRERQAPPVITTHVTREVEPLINKDAAVS 408 (424)
Q Consensus 369 i~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (424)
++=.....+.-.+--++-..-+-++.+|....+..+..++
T Consensus 362 ~~~s~~~~~ii~~il~~~~~lRv~~e~E~~GlD~~~hg~~ 401 (403)
T TIGR00836 362 IAWAFVVTFIILKILDKTIGLRVSEEEEKIGLDLAEHGEF 401 (403)
T ss_pred HHHHHHHHHHHHHHHHhcccccCCHHHHHhCCChhhhCcc
No 134
>COG0004 AmtB Ammonia permease [Inorganic ion transport and metabolism]
Probab=42.40 E-value=3.8e+02 Score=27.20 Aligned_cols=43 Identities=21% Similarity=0.290 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 039506 245 IGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFF 289 (424)
Q Consensus 245 l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 289 (424)
+.+.+|+-....+.|++ +.|+++.........+..-.+...++
T Consensus 289 i~g~i~~~a~~~lk~~l--~~DD~ld~f~vHGvgGi~G~i~~GiF 331 (409)
T COG0004 289 IAGVICYFAVKLLKKKL--GVDDALDVFGVHGVGGIVGAILTGIF 331 (409)
T ss_pred HHHHHHHHHHHHHHHhc--CCCCcccceeccchhhHHHHHHHHHh
Confidence 34445555555554443 45555666555555554444444443
No 135
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=42.19 E-value=2.1e+02 Score=25.02 Aligned_cols=52 Identities=12% Similarity=0.200 Sum_probs=33.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhh-----cCCCcchhHHHHHHHHHHHHHHHH
Q 039506 236 QWHLGVLCLIGNCMCMAAFIAIQAPILR-----KYPSSLSVTAYSYFFGAVLMVITA 287 (424)
Q Consensus 236 ~~~~G~l~~l~a~l~~a~~~v~~k~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~ 287 (424)
+..-....++.+++++++..++.....+ +.|.|+.-..+.+..+.++.+.+.
T Consensus 129 ~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaFm 185 (193)
T COG4657 129 NFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAFM 185 (193)
T ss_pred hHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHc
Confidence 4556677888888888887776554443 455566666666666666555544
No 136
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=41.36 E-value=2.7e+02 Score=25.14 Aligned_cols=32 Identities=6% Similarity=0.109 Sum_probs=21.4
Q ss_pred HHHHHHHcCCCcchhhHHHHHHHH--Hhhheeee
Q 039506 346 AFLSKIFLGSPIYLGSVLGGCLII--AGLYMVTW 377 (424)
Q Consensus 346 ~l~~~l~~~e~~~~~~~lG~~lii--~g~~l~~~ 377 (424)
-.+|..++.+..-+-+.+|..|.+ +|.+...+
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~ 166 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLAR 166 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 345777788877788888887754 45555443
No 137
>COG0670 Integral membrane protein, interacts with FtsH [General function prediction only]
Probab=41.04 E-value=3e+02 Score=25.61 Aligned_cols=49 Identities=22% Similarity=0.284 Sum_probs=26.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhhhcccchHHHHHHH
Q 039506 110 TRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAAIQPSIPVFTFLL 158 (424)
Q Consensus 110 ~~~~~~~~l~~g~lg~~~~~~~~~~al~~~~~~~a~ii~~l~Pi~~~ll 158 (424)
+......+...++.|..++..+..++-...+......+..+.-+|..+-
T Consensus 84 ~~~~~~~~~~t~l~G~tL~~i~~~Y~~~~~~~~i~~af~~t~~~F~~ls 132 (233)
T COG0670 84 PTALILFFVYTALVGLTLSPILLVYAAISGGDAIAAAFGITALVFGALS 132 (233)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHH
Confidence 3444445556666666666666666665555345555555554444433
No 138
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=39.87 E-value=3.4e+02 Score=25.85 Aligned_cols=110 Identities=9% Similarity=0.009 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHHHh-hcCCChHHHHHHHHHHHHHHHHHHHHhhcc--cccCcCCHHHHHHHHHHHHHHHHHHHHHH
Q 039506 56 ALVQLFYGGYHVITKVAL-NVGVNQLVFCVFRDLLALSILAPIAYFREK--RTRLPMTRRLLMSFFFLGLTGIFGNQLLF 132 (424)
Q Consensus 56 l~a~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~--~~~~~~~~~~~~~~l~~g~lg~~~~~~~~ 132 (424)
++..+++++.+.+..+.. .+++.|-....+-......+...+...++. +.+.+.-.-+.+.+++-+.+. ..-++.|
T Consensus 100 l~ll~lyAlinAl~~l~dGGR~v~~~~ai~yt~~s~~~Ca~~~~~~~r~nrr~~s~lIald~kqW~Mst~lS-~al~VaF 178 (314)
T COG3965 100 LALLCLYALINALGSLLDGGREVEPGHAIAYTLVSVTGCAAIAWKLRRLNRRLKSPLIALDTKQWLMSTCLS-AALFVAF 178 (314)
T ss_pred HHHHHHHHHHHHHHHHhcCCccccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCchhhhHHHHHHHHHHHH-HHHHHHH
Confidence 344455666666655543 134667666666666666666655554442 222222233334444444442 3334455
Q ss_pred HHHhhccCcchhhhcccchHHHHHHHHHHHhhcc
Q 039506 133 LLGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTER 166 (424)
Q Consensus 133 ~~al~~~~~~~a~ii~~l~Pi~~~lla~l~l~e~ 166 (424)
..|.-......+-...+.-|...++....+-.-+
T Consensus 179 ~~a~~l~~T~~a~l~~Y~DPmvlaL~~~v~IplP 212 (314)
T COG3965 179 AAAWLLAGTKFAHLVVYADPMVLALVCLVFIPLP 212 (314)
T ss_pred HHHHHhccCchhhhhcccCHHHHHHHHHheeecc
Confidence 5555555566667778899999999988875444
No 139
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=38.77 E-value=5.9e+02 Score=28.30 Aligned_cols=44 Identities=18% Similarity=0.140 Sum_probs=29.1
Q ss_pred chhhhcccchHHHHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhh
Q 039506 142 TYAAAIQPSIPVFTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILM 191 (424)
Q Consensus 142 ~~a~ii~~l~Pi~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li 191 (424)
+.+.++..+.|.-.+.++.+...+|.+... +.+.+-.++|.+.+
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~~~~------~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGGDKA------FFSALGVLLGAISI 54 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhcccchH------HHHHHHHHHHHHHh
Confidence 455677889999999888887666643333 55555555665544
No 140
>PRK10666 ammonium transporter; Provisional
Probab=37.46 E-value=4.7e+02 Score=26.80 Aligned_cols=22 Identities=18% Similarity=0.182 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc
Q 039506 117 FFFLGLTGIFGNQLLFLLGLSY 138 (424)
Q Consensus 117 ~l~~g~lg~~~~~~~~~~al~~ 138 (424)
+..+|.+-...++..|+.+-..
T Consensus 222 ~~~lGt~lLw~GW~gFN~Gs~~ 243 (428)
T PRK10666 222 MVFTGTAILYIGWFGFNAGSAG 243 (428)
T ss_pred HHHHHHHHHHHHHHhccchhhc
Confidence 4455555466677777766654
No 141
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=33.87 E-value=26 Score=29.93 Aligned_cols=28 Identities=21% Similarity=0.123 Sum_probs=20.4
Q ss_pred hhccChhhHhhhcchhHHHHHHHHHHHc
Q 039506 326 NKILGPALVALYNPLQPAASAFLSKIFL 353 (424)
Q Consensus 326 ~~~~~~~~~s~~~~~~pi~~~l~~~l~~ 353 (424)
+..-+..+.+.+.|+.|.++++++.++.
T Consensus 69 i~EkslL~sA~LvYi~PL~~l~v~~~La 96 (150)
T COG3086 69 IEEKSLLKSALLVYIFPLVGLFLGAILA 96 (150)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666778888888888888877663
No 142
>PF15102 TMEM154: TMEM154 protein family
Probab=32.90 E-value=67 Score=27.52 Aligned_cols=25 Identities=16% Similarity=0.235 Sum_probs=14.5
Q ss_pred HHHHHHHHHhhheeeeecccccCCC
Q 039506 362 VLGGCLIIAGLYMVTWVSYRERQAP 386 (424)
Q Consensus 362 ~lG~~lii~g~~l~~~~~~~~~~~~ 386 (424)
+++.+|++..++++.+.++|+.|+.
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~K~~ 90 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRTKQE 90 (146)
T ss_pred HHHHHHHHHHHHheeEEeecccCCC
Confidence 4455555666666666655555443
No 143
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=31.81 E-value=5.5e+02 Score=25.88 Aligned_cols=48 Identities=13% Similarity=0.020 Sum_probs=22.6
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 039506 240 GVLCLIGN-CMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFF 289 (424)
Q Consensus 240 G~l~~l~a-~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 289 (424)
..+.++++ .+++-.+..+.+|. +.|++..........+..-.+...++
T Consensus 277 A~~iG~iag~i~~~~~~~l~~~~--~iDD~~~~~~vHg~~Gi~G~i~~glf 325 (399)
T PF00909_consen 277 ALLIGAIAGLISYFGVSWLLKRL--KIDDPVGAFAVHGVGGIWGTILTGLF 325 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--TS-HTTGHHHHCHHHHHHHHHHHHHH
T ss_pred HHHhhhhHhhhhhhheeccccee--EeccccceEeeeeccHHHHHHHHHHH
Confidence 34444544 33444444344444 45555565555555555444444444
No 144
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=31.14 E-value=46 Score=28.05 Aligned_cols=15 Identities=20% Similarity=0.545 Sum_probs=7.8
Q ss_pred HHHHHHHHHhhheee
Q 039506 362 VLGGCLIIAGLYMVT 376 (424)
Q Consensus 362 ~lG~~lii~g~~l~~ 376 (424)
++|..+.+.|++...
T Consensus 90 i~g~~~~~~G~~~i~ 104 (136)
T PF08507_consen 90 IIGLLLFLVGVIYII 104 (136)
T ss_pred HHHHHHHHHHHHHHH
Confidence 345555555555443
No 145
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=30.51 E-value=5.7e+02 Score=25.63 Aligned_cols=18 Identities=17% Similarity=0.311 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 039506 312 IIASAVNYGLITWSNKIL 329 (424)
Q Consensus 312 ~~~~~~~~~l~~~a~~~~ 329 (424)
+..+.++.+++.-++|+-
T Consensus 114 ~~nGilGl~ll~GGlr~~ 131 (366)
T PRK10599 114 VTGGLVGFSLLLGGRKFA 131 (366)
T ss_pred HhccHHHHHHHHhccccC
Confidence 345566777777777664
No 146
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=30.28 E-value=3e+02 Score=22.31 Aligned_cols=32 Identities=6% Similarity=-0.019 Sum_probs=24.4
Q ss_pred HHHHHHHHHhhcccccccccccchhhHHHHHHHhHhhh
Q 039506 154 FTFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILM 191 (424)
Q Consensus 154 ~~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li 191 (424)
.-++++.+++||++++.. ..|.++.+.++..+
T Consensus 75 vF~~Fsv~~l~E~l~~n~------l~af~~i~~av~fi 106 (108)
T PF04342_consen 75 VFAPFSVFYLGEPLKWNY------LWAFLCILGAVYFI 106 (108)
T ss_pred eeHHHHHHHhCCCccHHH------HHHHHHHHHhhhee
Confidence 445677789999999998 88888776666543
No 147
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.39 E-value=90 Score=24.82 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=26.6
Q ss_pred HHHHHHHcCCCcchhhHHHHHHHHHhhheee
Q 039506 346 AFLSKIFLGSPIYLGSVLGGCLIIAGLYMVT 376 (424)
Q Consensus 346 ~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~ 376 (424)
..++.+.++|++.+..+.|..++.+|+..+.
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 3567888999999999999999999987654
No 148
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=27.71 E-value=6.6e+02 Score=25.52 Aligned_cols=65 Identities=15% Similarity=0.104 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHH--HHhhccChhhHhhhcchhHHHHHHHHHHHcCCCcchhhHHHHHHHHHhh
Q 039506 308 IYAGIIASAVNYGLIT--WSNKILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSVLGGCLIIAGL 372 (424)
Q Consensus 308 ~~~g~~~~~~~~~l~~--~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~~~~~~lG~~lii~g~ 372 (424)
+.+|+++..+++.... +-.|.-++..+-.+=..-=+++.++.-++-++..-..|++|++.+++=.
T Consensus 297 ~iiG~iag~v~~~~~~~~~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~~~~~l~~Ql~g~~~~~~~~ 363 (404)
T TIGR03644 297 TLIGAVGGVIVVFSIVLLDKLKIDDPVGAISVHGVAGIWGTLVVPITNGDASFGAQLIGAATIFAWV 363 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCcCchHhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 3344444444443321 2234456655555555555666666655544444456888877766543
No 149
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=27.61 E-value=18 Score=34.33 Aligned_cols=63 Identities=11% Similarity=0.100 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhccChhhHhhhcchhH----HHHHHHHHHHcCCCcchhhHHHHHHHHHhhheeeee
Q 039506 316 AVNYGLITWSNKILGPALVALYNPLQP----AASAFLSKIFLGSPIYLGSVLGGCLIIAGLYMVTWV 378 (424)
Q Consensus 316 ~~~~~l~~~a~~~~~~~~~s~~~~~~p----i~~~l~~~l~~~e~~~~~~~lG~~lii~g~~l~~~~ 378 (424)
++...+|.+.+++.+++.-.++...-. ++-.++++++-...+|...=+=-.+.++++++..+.
T Consensus 119 aL~vW~Ym~lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~L~qaWfT~L~dL~WL~LFlaiLIWlY~ 185 (381)
T PF05297_consen 119 ALGVWFYMWLLRELGASFWTILAFCLAFLLAIVLLIIAVLLHQAWFTILVDLYWLLLFLAILIWLYV 185 (381)
T ss_dssp -------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445556677788888887766554332 222333444444555544333334455566554443
No 150
>PF07698 7TM-7TMR_HD: 7TM receptor with intracellular HD hydrolase; InterPro: IPR011621 These bacterial 7TM receptor proteins have an intracellular domain IPR006674 from INTERPRO. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain.
Probab=26.18 E-value=4.5e+02 Score=23.12 Aligned_cols=33 Identities=6% Similarity=0.047 Sum_probs=14.4
Q ss_pred HHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHh
Q 039506 257 IQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFL 290 (424)
Q Consensus 257 ~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 290 (424)
..|+..++.+ -...-.+......+......+..
T Consensus 120 ~~~~~~~R~~-~i~ag~~v~l~~~~~~l~~~l~~ 152 (194)
T PF07698_consen 120 SVRRIRSRSD-IIKAGLLVGLVNALMILALGLIQ 152 (194)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455555544 23334444444444444444433
No 151
>PRK10489 enterobactin exporter EntS; Provisional
Probab=25.22 E-value=6.7e+02 Score=24.74 Aligned_cols=19 Identities=26% Similarity=0.301 Sum_probs=9.7
Q ss_pred hhhHHHHHHHHHhhheeee
Q 039506 359 LGSVLGGCLIIAGLYMVTW 377 (424)
Q Consensus 359 ~~~~lG~~lii~g~~l~~~ 377 (424)
...+.|.+..+++++....
T Consensus 380 ~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 380 SASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3344555555555555443
No 152
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=24.00 E-value=2e+02 Score=20.16 Aligned_cols=44 Identities=27% Similarity=0.413 Sum_probs=31.6
Q ss_pred hhHHHHHHHhHhhhhhccCCcccCCCCCCCccccccccCCCCCCcccccccccccCchhhHHHHHHHHHHHHHHHHHHHH
Q 039506 178 VGGTFICVSGAILMVLFRGPALFGCGNEDFVGENEVRVRGQPEPVGWLLSNFIDIGLDQWHLGVLCLIGNCMCMAAFIAI 257 (424)
Q Consensus 178 ~~g~~l~i~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~ 257 (424)
++|..+.+.|++++.. |+ .|.+..+++-...+.....
T Consensus 6 v~G~~lv~~Gii~~~l-------------------------PG------------------pG~l~i~~GL~iLa~ef~w 42 (53)
T PF09656_consen 6 VLGWVLVVAGIIMLPL-------------------------PG------------------PGLLVIFLGLAILATEFPW 42 (53)
T ss_pred hHHHHHHHHHHHhhcC-------------------------CC------------------CcHHHHHHHHHHHHHhhHH
Confidence 7888999999998872 21 3556667777778877777
Q ss_pred HHHhhhc
Q 039506 258 QAPILRK 264 (424)
Q Consensus 258 ~k~~~~~ 264 (424)
.|+..+.
T Consensus 43 Arr~l~~ 49 (53)
T PF09656_consen 43 ARRLLRR 49 (53)
T ss_pred HHHHHHH
Confidence 7776543
No 153
>PF07330 DUF1467: Protein of unknown function (DUF1467); InterPro: IPR009935 This family consists of several bacterial proteins of around 90 residues in length. The function of this family is unknown.
Probab=23.02 E-value=3.6e+02 Score=20.86 Aligned_cols=58 Identities=12% Similarity=-0.021 Sum_probs=32.0
Q ss_pred hhhhhhhheeecccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 039506 14 YFGFLVYFFIEAKQRTLHDETKNFKIKSLSMEREVLRAHGAMALVQLFYGGYHVITKV 71 (424)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~k~ 71 (424)
-..|.+-+|.-..|++.++....+........+-..+....-++++.+|+........
T Consensus 16 ~~lF~vLP~gvrtq~E~g~vv~Gt~~sAP~~~~l~rk~~~TTiiaavi~~~~~~~~~~ 73 (85)
T PF07330_consen 16 IVLFAVLPFGVRTQDEAGEVVPGTDPSAPANPRLKRKALITTIIAAVIFAIIYLIIVS 73 (85)
T ss_pred HHHHHHccCCccccCcCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3466677777766666544332222221111112235566678888888887766543
No 154
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=22.86 E-value=8.3e+02 Score=27.14 Aligned_cols=17 Identities=12% Similarity=0.077 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHh
Q 039506 84 VFRDLLALSILAPIAYF 100 (424)
Q Consensus 84 ~~r~~~~~l~l~~~~~~ 100 (424)
-.|+.....++..++..
T Consensus 338 ~~R~~fi~~f~~~~~~~ 354 (843)
T PF09586_consen 338 PYRWSFIFIFLISLLAA 354 (843)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 36776666655555444
No 155
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=22.10 E-value=3.4e+02 Score=28.89 Aligned_cols=17 Identities=6% Similarity=0.077 Sum_probs=8.8
Q ss_pred HHHHHHHHhhheeeeec
Q 039506 363 LGGCLIIAGLYMVTWVS 379 (424)
Q Consensus 363 lG~~lii~g~~l~~~~~ 379 (424)
++++++++..+.+++.-
T Consensus 534 iAcl~~l~~~~~iq~~l 550 (618)
T KOG3762|consen 534 IACLVTLALFISIQLLL 550 (618)
T ss_pred HHHHHHHHHHHHhhhhh
Confidence 44555555555555443
No 156
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=21.83 E-value=3.8e+02 Score=20.93 Aligned_cols=25 Identities=20% Similarity=0.266 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Q 039506 239 LGVLCLIGNCMCMAAFIAIQAPILR 263 (424)
Q Consensus 239 ~G~l~~l~a~l~~a~~~v~~k~~~~ 263 (424)
+-.+.++.|+++-+.|..+...+.+
T Consensus 61 plAv~GlgsalGI~G~q~vE~~lrr 85 (89)
T PF04550_consen 61 PLAVIGLGSALGIAGYQAVEAWLRR 85 (89)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3346677777777777766555444
No 157
>COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms]
Probab=21.59 E-value=8.6e+02 Score=24.88 Aligned_cols=126 Identities=11% Similarity=-0.003 Sum_probs=0.0
Q ss_pred ccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHhcC-----------CCc
Q 039506 227 SNFIDIGLDQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFFLTN-----------DST 295 (424)
Q Consensus 227 ~~~~~~~~~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----------~~~ 295 (424)
.++.+.+...........+..+++.+....+.|+..++..+.......+.+..++++.+....... .+.
T Consensus 50 ~alaav~la~~i~~~~~~~~~gl~~g~~~liaq~~Ga~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ll~~l~~~~ 129 (455)
T COG0534 50 EALAAVGLANPIFFLIIAIFIGLGTGTTVLVAQAIGAGDRKKAKRVLGQGLLLALLLGLLLAILLLFFAEPLLRLLGAPA 129 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHhhhcchhHHHHHHHHHHH
Q 039506 296 EWSLTQSELFAVIYAGIIASAVNYGLITWSNKILGPALVALYNPLQPAASAFLSKIF 352 (424)
Q Consensus 296 ~~~~~~~~~~~l~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pi~~~l~~~l~ 352 (424)
+.......+..+...+.....+.+.+...--...++-....+....-+.-+++++++
T Consensus 130 ~v~~~a~~Yl~i~~~~~~~~~~~~~~~~~lr~~G~~~~~m~~~~~~~~lNivln~ll 186 (455)
T COG0534 130 EVLELAAEYLRIILLGAPFALLSFVLSGILRGLGDTKTPMYILLLGNLLNIVLNYLL 186 (455)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHhhHHH
No 158
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=21.18 E-value=8.8e+02 Score=24.63 Aligned_cols=47 Identities=9% Similarity=-0.017 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 039506 241 VLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITAFF 289 (424)
Q Consensus 241 ~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 289 (424)
.++++++++..-....+.+|+ +.|++..........+..-.+...++
T Consensus 297 ~iiG~iag~v~~~~~~~~~~~--~iDD~~~~~~vHg~~Gi~G~i~~glf 343 (404)
T TIGR03644 297 TLIGAVGGVIVVFSIVLLDKL--KIDDPVGAISVHGVAGIWGTLVVPIT 343 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHhC--CCCCCcCchHhhhHHHHHHHHHHHHh
Confidence 344444444333333334442 45656666666555555444444443
No 159
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=21.11 E-value=9.2e+02 Score=24.84 Aligned_cols=51 Identities=10% Similarity=0.156 Sum_probs=31.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 039506 235 DQWHLGVLCLIGNCMCMAAFIAIQAPILRKYPSSLSVTAYSYFFGAVLMVITA 287 (424)
Q Consensus 235 ~~~~~G~l~~l~a~l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 287 (424)
+...+|++.. +-.+.|++.-.++.....+.+ |-..+....+.++++.+.+.
T Consensus 62 sk~~lG~i~s-~f~i~YG~sKf~~G~~sDr~n-pr~fm~~gLilsai~nil~G 112 (448)
T COG2271 62 SKTQLGILGS-AFSITYGVSKFVMGVLSDRSN-PRYFMAFGLILSAIVNILFG 112 (448)
T ss_pred CHHHHHHHHH-HHHHHHHHHHHHhhhhcccCC-CceeehHHHHHHHHHHHHHh
Confidence 3444565443 335778888888888777766 45666666666665555443
No 160
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.06 E-value=1.3e+02 Score=23.90 Aligned_cols=31 Identities=6% Similarity=0.054 Sum_probs=24.6
Q ss_pred HHHHHHHHhhcccccccccccchhhHHHHHHHhHhhh
Q 039506 155 TFLLAVMMGTERVNLLTTEGQAKVGGTFICVSGAILM 191 (424)
Q Consensus 155 ~~lla~l~l~e~~~~~~~~~~~~~~g~~l~i~Gv~li 191 (424)
-..++.+.+||++++.. +.+..+...|+..+
T Consensus 83 Fv~Fsvfyl~epl~~~~------l~a~~~i~gav~fi 113 (116)
T COG3169 83 FVPFSVFYLKEPLRWNY------LWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHcCcchHHH------HHHHHHHHHHHHHh
Confidence 34567888999999998 88888777777665
No 161
>PRK01061 Na(+)-translocating NADH-quinone reductase subunit E; Provisional
Probab=20.74 E-value=7.1e+02 Score=23.39 Aligned_cols=23 Identities=17% Similarity=0.093 Sum_probs=14.9
Q ss_pred CCCcchhhHHHHHHHHHhhheee
Q 039506 354 GSPIYLGSVLGGCLIIAGLYMVT 376 (424)
Q Consensus 354 ~e~~~~~~~lG~~lii~g~~l~~ 376 (424)
.+.|...+-.++.++.+|+..+.
T Consensus 180 ~~iP~~~~G~pIafI~aGlmalA 202 (244)
T PRK01061 180 SDVPKNLQGMGISFITTGLIAMA 202 (244)
T ss_pred CCCCccccchhHHHHHHHHHHHH
Confidence 45566666667777777776554
No 162
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=20.69 E-value=8.7e+02 Score=24.42 Aligned_cols=69 Identities=19% Similarity=0.194 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHH---HHhhccChhhHhhhcchhHHHHHHHHHHHcCCCc----------------chhhHHHHH
Q 039506 306 AVIYAGIIASAVNYGLIT---WSNKILGPALVALYNPLQPAASAFLSKIFLGSPI----------------YLGSVLGGC 366 (424)
Q Consensus 306 ~l~~~g~~~~~~~~~l~~---~a~~~~~~~~~s~~~~~~pi~~~l~~~l~~~e~~----------------~~~~~lG~~ 366 (424)
..+.+|+++..+++.... +-.|.-++..+-.+-..-=+++.++.-++-.+.. -..|++|.+
T Consensus 276 ~A~~iG~iag~i~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa~~~~~~~~~~~~~~~~~~~~l~~Ql~g~~ 355 (399)
T PF00909_consen 276 GALLIGAIAGLISYFGVSWLLKRLKIDDPVGAFAVHGVGGIWGTILTGLFASPEVNYSDGYGGLFYGNGRQLGIQLLGIV 355 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTS-HTTGHHHHCHHHHHHHHHHHHHHCCCHHCSS-SSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhHhhhhhhheecccceeEeccccceEeeeeccHHHHHHHHHHHhccccccccccccccCCchhHHHHHHHHHH
Confidence 334455555555555443 3334446666666666666777777766655442 246777777
Q ss_pred HHHHhhhe
Q 039506 367 LIIAGLYM 374 (424)
Q Consensus 367 lii~g~~l 374 (424)
.++.-...
T Consensus 356 ~~~~~~~~ 363 (399)
T PF00909_consen 356 VILAWSFV 363 (399)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76654443
Done!