BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039514
(790 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 183/651 (28%), Positives = 277/651 (42%), Gaps = 86/651 (13%)
Query: 30 LAHNWTSNASVCTWI----------------GITCDVNSHRVTAL---DTSQFNLQGTIP 70
L+ N S A+V W+ I+ DV+ R L D S N IP
Sbjct: 155 LSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP 214
Query: 71 SQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDI 130
LG+ S+L L++S NKLSG +I T LK L+ + NQ G + + S+ +
Sbjct: 215 F-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYL 271
Query: 131 RLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKXXXXXXXXXXXXSGAI 190
L N+ +GE+P + L L L N F+G +P C SG +
Sbjct: 272 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 331
Query: 191 PKEIGNLTMLKGISLLYNKLQEAXXXXXXXXXXXXPATIFNMST--LKVXXXXXXXXXXX 248
P + L ++G+ +L E P ++ N+S L +
Sbjct: 332 PMDT--LLKMRGLKVLDLSFNE--------FSGELPESLTNLSASLLTLDLSSNNFSGPI 381
Query: 249 XXXRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNL 308
T++ L L N F G IP +++N S+L L L N SG IP ++G+L
Sbjct: 382 LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL--- 438
Query: 309 EWXXXXXXXXXXXXXXXXXXXXXANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIA 368
KLR LKL N L+G +P + + K+LETL++
Sbjct: 439 --------------------------SKLRDLKLWLNMLEGEIPQELMYV-KTLETLILD 471
Query: 369 NCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDEL 428
++G IP +SN +NL + L N+LTG I GRL+ L L L++N+ G+ P EL
Sbjct: 472 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Query: 429 CHIGRLAELALLDNRHSGSIPSCVSN---------LTSLRYLYLGSN------------- 466
L L L N +G+IP+ + + RY+Y+ ++
Sbjct: 532 GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLL 591
Query: 467 RFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGG 526
F + L + +S G S N ++ +++S N LSG +P IG
Sbjct: 592 EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 651
Query: 527 LKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFN 586
+ L ++L +N + G IP+ GDL L +L+LS NK+ G IP++M L L E++LS N
Sbjct: 652 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 711
Query: 587 ELEGEIPSGGIFANFTAESFMGNELLCGLPNLQVQPCKVSKPRTEHKSRKK 637
L G IP G F F F+ N LCG P + P +S +
Sbjct: 712 NLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNADGYAHHQRSHGR 762
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 182/701 (25%), Positives = 290/701 (41%), Gaps = 140/701 (19%)
Query: 2 AAASSNITTDQQALLALKDHIISDPTNLLAHNWTSNASVCTWIGITCDVNSHRVTALD-- 59
A S ++ + L++ KD + P L +W+SN + CT+ G+TC +VT++D
Sbjct: 1 AMGSQSLYREIHQLISFKDVL---PDKNLLPDWSSNKNPCTFDGVTC--RDDKVTSIDLS 55
Query: 60 -------------------------TSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVP 94
S ++ G++ S +SLT L+LS N LSG V
Sbjct: 56 SKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVT 114
Query: 95 --SSIYTMHTLKFLDFTDNQLS--GSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYL- 149
+S+ + LKFL+ + N L G VS + ++S+ + L+ N +SG N+ ++
Sbjct: 115 TLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISG---ANVVGWVL 170
Query: 150 ----PHLKALFLDKNMFHGKIPSALSKCKXXXXXXXXXXXXSGAIPKEIGNLTMLKGISL 205
LK L + N G + +S+C S IP +G+ + L+ + +
Sbjct: 171 SDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDI 227
Query: 206 LYNKLQEAXXXXXXXXXXXXPATIFNMSTLKVXXXXXXXXXXXXXXRIDLSLPTVEVLIL 265
NKL + N+S+ + L L +++ L L
Sbjct: 228 SGNKLSGDFSRAISTCTEL---KLLNISSNQFVGPIP-----------PLPLKSLQYLSL 273
Query: 266 ALNRFFGTIPSSITNA-SKLTVLELGGNTFSGLIPDTIGNLRNLEWXXXXXXXXXXXXXX 324
A N+F G IP ++ A LT L+L GN F G +P G+
Sbjct: 274 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS----LLESLALSSNNFSG 329
Query: 325 XXXXXXXANCKKLRSLKLAGNPLDGFLPSSIGNLSKS----------------------- 361
+ L+ L L+ N G LP S+ NLS S
Sbjct: 330 ELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNP 389
Query: 362 ---LETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASN 418
L+ L + N +G IP +SN S L++L L N L+G I + G L KL+ L L N
Sbjct: 390 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN 449
Query: 419 NLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWS 478
L G P EL ++ L L L N +G IPS +SN T+L ++ L +NR T IP
Sbjct: 450 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 509
Query: 479 LKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATI-------------- 524
L+++ S+N G + ++G+ + L+ ++L+ N +G +PA +
Sbjct: 510 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAG 569
Query: 525 --------GGLKD--------LQFMDL---AYNRLE-------------GPIPESFGDLT 552
G+K L+F + NRL G +F +
Sbjct: 570 KRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNG 629
Query: 553 SLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIP 593
S+ L++S N +SG IPK + + YL LNL N++ G IP
Sbjct: 630 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 670
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 135/550 (24%), Positives = 200/550 (36%), Gaps = 117/550 (21%)
Query: 28 NLLAHNWTSNASVCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHN 87
N L+ +++ S CT + ++ + ++QF G IP L SL L+L+ N
Sbjct: 230 NKLSGDFSRAISTCTEL---------KLLNISSNQF--VGPIPPL--PLKSLQYLSLAEN 276
Query: 88 KLSGSVPSSIY-TMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELP---- 142
K +G +P + TL LD + N G+V F + S + + L++N SGELP
Sbjct: 277 KFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTL 336
Query: 143 ----------------------------------------------KNIC-NYLPHLKAL 155
N+C N L+ L
Sbjct: 337 LKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQEL 396
Query: 156 FLDKNMFHGKIPSALSKCKXXXXXXXXXXXXSGAIPKEIGNLTMLKGISLLYNKLQEAXX 215
+L N F GKIP LS C SG IP +G+L+ L+ + L N L+
Sbjct: 397 YLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGE-- 454
Query: 216 XXXXXXXXXXPATIFNMSTLKVXXXXXXXXXXXXXXRIDLSLPTVEVLILALNRFFGTIP 275
P + + TL E LIL N G IP
Sbjct: 455 ---------IPQELMYVKTL-------------------------ETLILDFNDLTGEIP 480
Query: 276 SSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWXXXXXXXXXXXXXXXXXXXXXANCK 335
S ++N + L + L N +G IP IG L NL +C+
Sbjct: 481 SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL-----AILKLSNNSFSGNIPAELGDCR 535
Query: 336 KLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSI----SGNIPQAISNLSNLLTLVL 391
L L L N +G +P+++ S + IA + + + NLL
Sbjct: 536 SLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLL---- 591
Query: 392 ERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSC 451
+ G S RL + S G + G + L + N SG IP
Sbjct: 592 ---EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKE 648
Query: 452 VSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINL 511
+ ++ L L LG N + IP L+ + D SSN L G + + L +L I+L
Sbjct: 649 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 708
Query: 512 SENNLSGDMP 521
S NNLSG +P
Sbjct: 709 SNNNLSGPIP 718
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 154/369 (41%), Gaps = 44/369 (11%)
Query: 21 HIISDPTNLLAHNWTSNASVCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLT 80
++ +P N L + N I T N + +L S L GTIPS LG+LS L
Sbjct: 384 NLCQNPKNTLQELYLQNNGFTGKIPPTLS-NCSELVSLHLSFNYLSGTIPSSLGSLSKLR 442
Query: 81 ILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGE 140
L L N L G +P + + TL+ L N L+G + S + N +++ I L+NNRL+GE
Sbjct: 443 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 502
Query: 141 LPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKXXXXXXXXXXXXSGAIP----KEIGN 196
+PK I L +L L L N F G IP+ L C+ +G IP K+ G
Sbjct: 503 IPKWI-GRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 561
Query: 197 LT--MLKGISLLYNK----LQEAXXXXXXXXXXXXPATIFN-MSTLKVXXXXXXXXXXXX 249
+ + G +Y K +E + N +ST
Sbjct: 562 IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHT 621
Query: 250 XXRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLE 309
D + ++ L ++ N G IP I + L +L LG N SG IPD +G+LR L
Sbjct: 622 SPTFD-NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN 680
Query: 310 WXXXXXXXXXXXXXXXXXXXXXANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIAN 369
L L+ N LDG +P ++ L+ L + ++N
Sbjct: 681 I-----------------------------LDLSSNKLDGRIPQAMSALTM-LTEIDLSN 710
Query: 370 CSISGNIPQ 378
++SG IP+
Sbjct: 711 NNLSGPIPE 719
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 139/318 (43%), Gaps = 59/318 (18%)
Query: 332 ANCKKLRSLKLAGNPLDGFLPSSI-GNLS-KSLETLVIANCSISG-NIPQAI--SNLSNL 386
+C L+ L ++ N LD P + G L SLE L ++ SISG N+ + L
Sbjct: 120 GSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGEL 177
Query: 387 LTLVLERNKLTGPISIT---------------------FGRLQKLQGLYLASNNLVGSFP 425
L + NK++G + ++ G LQ L ++ N L G F
Sbjct: 178 KHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFS 237
Query: 426 DELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILF- 484
+ L L + N+ G IP L SL+YL L N+FT IP D L
Sbjct: 238 RAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTG 295
Query: 485 FDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPA-TIGGLKDLQFMDLAYNRLEGP 543
D S N G + G+ +L + LS NN SG++P T+ ++ L+ +DL++N G
Sbjct: 296 LDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGE 355
Query: 544 IPESFGDLT-SLEVLNLSKNKISGSI-------PKSMEKLFYLR---------------- 579
+PES +L+ SL L+LS N SG I PK+ + YL+
Sbjct: 356 LPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS 415
Query: 580 ---ELNLSFNELEGEIPS 594
L+LSFN L G IPS
Sbjct: 416 ELVSLHLSFNYLSGTIPS 433
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 182/636 (28%), Positives = 274/636 (43%), Gaps = 86/636 (13%)
Query: 30 LAHNWTSNASVCTWI----------------GITCDVNSHRVTAL---DTSQFNLQGTIP 70
L+ N S A+V W+ I+ DV+ R L D S N IP
Sbjct: 158 LSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP 217
Query: 71 SQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDI 130
LG+ S+L L++S NKLSG +I T LK L+ + NQ G + + S+ +
Sbjct: 218 F-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYL 274
Query: 131 RLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKXXXXXXXXXXXXSGAI 190
L N+ +GE+P + L L L N F+G +P C SG +
Sbjct: 275 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 334
Query: 191 PKEIGNLTMLKGISLLYNKLQEAXXXXXXXXXXXXPATIFNMST--LKVXXXXXXXXXXX 248
P + L ++G+ +L E P ++ N+S L +
Sbjct: 335 PMDT--LLKMRGLKVLDLSFNE--------FSGELPESLTNLSASLLTLDLSSNNFSGPI 384
Query: 249 XXXRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNL 308
T++ L L N F G IP +++N S+L L L N SG IP ++G+L
Sbjct: 385 LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL--- 441
Query: 309 EWXXXXXXXXXXXXXXXXXXXXXANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIA 368
KLR LKL N L+G +P + + K+LETL++
Sbjct: 442 --------------------------SKLRDLKLWLNMLEGEIPQELMYV-KTLETLILD 474
Query: 369 NCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDEL 428
++G IP +SN +NL + L N+LTG I GRL+ L L L++N+ G+ P EL
Sbjct: 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Query: 429 CHIGRLAELALLDNRHSGSIPSCVSN---------LTSLRYLYLGSN------------- 466
L L L N +G+IP+ + + RY+Y+ ++
Sbjct: 535 GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLL 594
Query: 467 RFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGG 526
F + L + +S G S N ++ +++S N LSG +P IG
Sbjct: 595 EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 654
Query: 527 LKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFN 586
+ L ++L +N + G IP+ GDL L +L+LS NK+ G IP++M L L E++LS N
Sbjct: 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 714
Query: 587 ELEGEIPSGGIFANFTAESFMGNELLCGLPNLQVQP 622
L G IP G F F F+ N LCG P + P
Sbjct: 715 NLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 750
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 182/701 (25%), Positives = 291/701 (41%), Gaps = 140/701 (19%)
Query: 2 AAASSNITTDQQALLALKDHIISDPTNLLAHNWTSNASVCTWIGITCDVNSHRVTALD-- 59
A+ S ++ + L++ KD + P L +W+SN + CT+ G+TC +VT++D
Sbjct: 4 ASPSQSLYREIHQLISFKDVL---PDKNLLPDWSSNKNPCTFDGVTC--RDDKVTSIDLS 58
Query: 60 -------------------------TSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVP 94
S ++ G++ S +SLT L+LS N LSG V
Sbjct: 59 SKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVT 117
Query: 95 --SSIYTMHTLKFLDFTDNQLS--GSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYL- 149
+S+ + LKFL+ + N L G VS + ++S+ + L+ N +SG N+ ++
Sbjct: 118 TLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISG---ANVVGWVL 173
Query: 150 ----PHLKALFLDKNMFHGKIPSALSKCKXXXXXXXXXXXXSGAIPKEIGNLTMLKGISL 205
LK L + N G + +S+C S IP +G+ + L+ + +
Sbjct: 174 SDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDI 230
Query: 206 LYNKLQEAXXXXXXXXXXXXPATIFNMSTLKVXXXXXXXXXXXXXXRIDLSLPTVEVLIL 265
NKL + N+S+ + L L +++ L L
Sbjct: 231 SGNKLSGDFSRAISTCTEL---KLLNISSNQFVGPIPP-----------LPLKSLQYLSL 276
Query: 266 ALNRFFGTIPSSITNA-SKLTVLELGGNTFSGLIPDTIGNLRNLEWXXXXXXXXXXXXXX 324
A N+F G IP ++ A LT L+L GN F G +P G+
Sbjct: 277 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS----LLESLALSSNNFSG 332
Query: 325 XXXXXXXANCKKLRSLKLAGNPLDGFLPSSIGNLSKS----------------------- 361
+ L+ L L+ N G LP S+ NLS S
Sbjct: 333 ELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNP 392
Query: 362 ---LETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASN 418
L+ L + N +G IP +SN S L++L L N L+G I + G L KL+ L L N
Sbjct: 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN 452
Query: 419 NLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWS 478
L G P EL ++ L L L N +G IPS +SN T+L ++ L +NR T IP
Sbjct: 453 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 512
Query: 479 LKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATI-------------- 524
L+++ S+N G + ++G+ + L+ ++L+ N +G +PA +
Sbjct: 513 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAG 572
Query: 525 --------GGLKD--------LQFMDL---AYNRLE-------------GPIPESFGDLT 552
G+K L+F + NRL G +F +
Sbjct: 573 KRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNG 632
Query: 553 SLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIP 593
S+ L++S N +SG IPK + + YL LNL N++ G IP
Sbjct: 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 135/542 (24%), Positives = 196/542 (36%), Gaps = 127/542 (23%)
Query: 28 NLLAHNWTSNASVCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHN 87
N L+ +++ S CT + ++ + ++QF G IP L SL L+L+ N
Sbjct: 233 NKLSGDFSRAISTCTEL---------KLLNISSNQF--VGPIPPL--PLKSLQYLSLAEN 279
Query: 88 KLSGSVPSSIY-TMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELP---- 142
K +G +P + TL LD + N G+V F + S + + L++N SGELP
Sbjct: 280 KFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTL 339
Query: 143 ----------------------------------------------KNIC-NYLPHLKAL 155
N+C N L+ L
Sbjct: 340 LKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQEL 399
Query: 156 FLDKNMFHGKIPSALSKCKXXXXXXXXXXXXSGAIPKEIGNLTMLKGISLLYNKLQEAXX 215
+L N F GKIP LS C SG IP +G+L+ L+ + L N L+
Sbjct: 400 YLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGE-- 457
Query: 216 XXXXXXXXXXPATIFNMSTLKVXXXXXXXXXXXXXXRIDLSLPTVEVLILALNRFFGTIP 275
P + + TL E LIL N G IP
Sbjct: 458 ---------IPQELMYVKTL-------------------------ETLILDFNDLTGEIP 483
Query: 276 SSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWXXXXXXXXXXXXXXXXXXXXXANCK 335
S ++N + L + L N +G IP IG L NL +C+
Sbjct: 484 SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL-----AILKLSNNSFSGNIPAELGDCR 538
Query: 336 KLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIA--------------NCSISGNIPQAIS 381
L L L N +G +P+++ S + IA C +GN+ +
Sbjct: 539 SLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQG 598
Query: 382 NLSNLLTLVLERNKLT-------GPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRL 434
S L + RN G S TF + L ++ N L G P E+ + L
Sbjct: 599 IRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYL 658
Query: 435 AELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVG 494
L L N SGSIP V +L L L L SN+ IP +L + D S+N L G
Sbjct: 659 FILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718
Query: 495 TL 496
+
Sbjct: 719 PI 720
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 154/369 (41%), Gaps = 44/369 (11%)
Query: 21 HIISDPTNLLAHNWTSNASVCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLT 80
++ +P N L + N I T N + +L S L GTIPS LG+LS L
Sbjct: 387 NLCQNPKNTLQELYLQNNGFTGKIPPTLS-NCSELVSLHLSFNYLSGTIPSSLGSLSKLR 445
Query: 81 ILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGE 140
L L N L G +P + + TL+ L N L+G + S + N +++ I L+NNRL+GE
Sbjct: 446 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 505
Query: 141 LPKNICNYLPHLKALFLDKNMFHGKIPSALSKCKXXXXXXXXXXXXSGAIP----KEIGN 196
+PK I L +L L L N F G IP+ L C+ +G IP K+ G
Sbjct: 506 IPKWI-GRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 564
Query: 197 LT--MLKGISLLYNK----LQEAXXXXXXXXXXXXPATIFN-MSTLKVXXXXXXXXXXXX 249
+ + G +Y K +E + N +ST
Sbjct: 565 IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHT 624
Query: 250 XXRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLE 309
D + ++ L ++ N G IP I + L +L LG N SG IPD +G+LR L
Sbjct: 625 SPTFD-NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN 683
Query: 310 WXXXXXXXXXXXXXXXXXXXXXANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIAN 369
L L+ N LDG +P ++ L+ L + ++N
Sbjct: 684 I-----------------------------LDLSSNKLDGRIPQAMSALTM-LTEIDLSN 713
Query: 370 CSISGNIPQ 378
++SG IP+
Sbjct: 714 NNLSGPIPE 722
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 139/318 (43%), Gaps = 59/318 (18%)
Query: 332 ANCKKLRSLKLAGNPLDGFLPSSI-GNLS-KSLETLVIANCSISG-NIPQAI--SNLSNL 386
+C L+ L ++ N LD P + G L SLE L ++ SISG N+ + L
Sbjct: 123 GSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGEL 180
Query: 387 LTLVLERNKLTGPISIT---------------------FGRLQKLQGLYLASNNLVGSFP 425
L + NK++G + ++ G LQ L ++ N L G F
Sbjct: 181 KHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFS 240
Query: 426 DELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILF- 484
+ L L + N+ G IP L SL+YL L N+FT IP D L
Sbjct: 241 RAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTG 298
Query: 485 FDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPA-TIGGLKDLQFMDLAYNRLEGP 543
D S N G + G+ +L + LS NN SG++P T+ ++ L+ +DL++N G
Sbjct: 299 LDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGE 358
Query: 544 IPESFGDLT-SLEVLNLSKNKISGSI-------PKSMEKLFYLR---------------- 579
+PES +L+ SL L+LS N SG I PK+ + YL+
Sbjct: 359 LPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS 418
Query: 580 ---ELNLSFNELEGEIPS 594
L+LSFN L G IPS
Sbjct: 419 ELVSLHLSFNYLSGTIPS 436
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 121/243 (49%), Gaps = 4/243 (1%)
Query: 376 IPQAISNLSNLLTLVLER-NKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRL 434
IP +++NL L L + N L GPI +L +L LY+ N+ G+ PD L I L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 435 AELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILF-FDFSSNFLV 493
L N SG++P +S+L +L + NR + IP ++ S + S N L
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 494 GTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTS 553
G + NL + ++LS N L GD G K+ Q + LA N L + G +
Sbjct: 188 GKIPPTFANLNLAF-VDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKN 245
Query: 554 LEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNELLC 613
L L+L N+I G++P+ + +L +L LN+SFN L GEIP GG F ++ N+ LC
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLC 305
Query: 614 GLP 616
G P
Sbjct: 306 GSP 308
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 132/307 (42%), Gaps = 27/307 (8%)
Query: 11 DQQALLALKDHIISDPTNLLAHNWTSNASVC--TWIGITCDVNS--HRVTALDTSQFNLQ 66
D+QALL +K + +PT L +W C TW+G+ CD ++ +RV LD S NL
Sbjct: 7 DKQALLQIKKDL-GNPTTL--SSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLP 63
Query: 67 GT--IPSQLGNLSSLTILNLSH-NKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFN 123
IPS L NL L L + N L G +P +I + L +L T +SG++ F+
Sbjct: 64 KPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ 123
Query: 124 MSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSAL-SKCKXXXXXXXX 182
+ ++V + + N LSG LP +I + LP+L + D N G IP + S K
Sbjct: 124 IKTLVTLDFSYNALSGTLPPSISS-LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS 182
Query: 183 XXXXSGAIPKEIGNLTMLKGISLLYNKLQEAXXXXXXXXXXXXPATIFNMSTLKVXXXXX 242
+G IP NL L + L N L+ + +F
Sbjct: 183 RNRLTGKIPPTFANLN-LAFVDLSRNMLEGDA------------SVLFGSDKNTQKIHLA 229
Query: 243 XXXXXXXXXRIDLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTI 302
++ LS + L L NR +GT+P +T L L + N G IP
Sbjct: 230 KNSLAFDLGKVGLS-KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG- 287
Query: 303 GNLRNLE 309
GNL+ +
Sbjct: 288 GNLQRFD 294
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 63/294 (21%)
Query: 274 IPSSITNASKLTVLELGG-NTFSGLIPDTIGNLRNLEWXXXXXXXXXXXXXXXXXXXXXA 332
IPSS+ N L L +GG N G IP I L L +
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHY---------------------- 105
Query: 333 NCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLE 392
L + + G +P + + K+L TL + ++SG +P +IS+L NL+ + +
Sbjct: 106 -------LYITHTNVSGAIPDFLSQI-KTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157
Query: 393 RNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCV 452
N+++G I ++G KL + + NR +G IP
Sbjct: 158 GNRISGAIPDSYGSFSKL-----------------------FTSMTISRNRLTGKIPPTF 194
Query: 453 SNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNL---KVLLGI 509
+NL +L ++ L N F S K+ + N +L+FD+G + K L G+
Sbjct: 195 ANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN----SLAFDLGKVGLSKNLNGL 249
Query: 510 NLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNK 563
+L N + G +P + LK L +++++N L G IP+ G+L +V + NK
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 61/218 (27%)
Query: 259 TVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWXXXXXXXX 318
T+ L + N GT+P SI++ L + GN SG IPD+ G+ L
Sbjct: 126 TLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL---------- 175
Query: 319 XXXXXXXXXXXXXANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQ 378
++ I+ ++G IP
Sbjct: 176 -------------------------------------------FTSMTISRNRLTGKIPP 192
Query: 379 AISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIG---RLA 435
+NL NL + L RN L G S+ FG + Q ++LA N+L +L +G L
Sbjct: 193 TFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF----DLGKVGLSKNLN 247
Query: 436 ELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIP 473
L L +NR G++P ++ L L L + N IP
Sbjct: 248 GLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 115/308 (37%), Gaps = 55/308 (17%)
Query: 131 RLTNNRLSG-------ELPKNICNYLPHLKALFLDK-NMFHGKIPSALSKCKXXXXXXXX 182
R+ N LSG +P ++ N LP+L L++ N G IP A++K
Sbjct: 51 RVNNLDLSGLNLPKPYPIPSSLAN-LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYIT 109
Query: 183 XXXXSGAIPKEIGNLTMLKGISLLYNKLQEAXXXXXXXXXXXXPATIFNMSTLKVXXXXX 242
SGAIP + + L + YN L P +I
Sbjct: 110 HTNVSGAIPDFLSQIKTLVTLDFSYNALSGTL-----------PPSIS------------ 146
Query: 243 XXXXXXXXXRIDLSLPTVEVLILALNRFFGTIPSSITNASKL-TVLELGGNTFSGLIPDT 301
SLP + + NR G IP S + SKL T + + N +G IP T
Sbjct: 147 -------------SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT 193
Query: 302 IGNLRNLEWXXXXXXXXXXXXXXXXXXXXXANCKKLRSLKLAGNPLDGFLPSSIGNLSKS 361
NL NL + + K + + LA N L F +G LSK+
Sbjct: 194 FANL-NLAF-----VDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL-AFDLGKVG-LSKN 245
Query: 362 LETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLV 421
L L + N I G +PQ ++ L L +L + N L G I G LQ+ A+N +
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCL 304
Query: 422 GSFPDELC 429
P C
Sbjct: 305 CGSPLPAC 312
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 683 ATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALK-SF 741
L+RFS EL A+DNF+ NI+GRGGFG VY RL DG +A+K ++ + F
Sbjct: 23 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQF 82
Query: 742 EAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLG 782
+ E E++ HRNL+++ C + LV YM+NGS+
Sbjct: 83 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 123
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 683 ATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALK-SF 741
L+RFS EL A+DNF NI+GRGGFG VY RL DG +A+K ++ + F
Sbjct: 15 GQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQF 74
Query: 742 EAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLG 782
+ E E++ HRNL+++ C + LV YM+NGS+
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 115
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%)
Query: 687 RFSYLELLQATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECE 746
R ++L +AT+NF +IG G FG VY L DG K+A+K + + ++ FE E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 747 VLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
L RH +L+ +I C + L+ +YM NG+L L+ S+
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD 130
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%)
Query: 687 RFSYLELLQATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECE 746
R ++L +AT+NF +IG G FG VY L DG K+A+K + + ++ FE E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 747 VLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
L RH +L+ +I C + L+ +YM NG+L L+ S+
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD 130
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 674 SNDSILSSQATLRRFSYLELLQATDNFAEN------NIIGRGGFGSVYGARLEDGMKIAI 727
N S+ S FS+ EL T+NF E N +G GGFG VY + + +A+
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAV 59
Query: 728 KVFHQQC---ASALKS-FEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGD 783
K LK F+ E +V+ K +H NL++++ S+ D LV YM NGSL D
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 784 WL 785
L
Sbjct: 120 RL 121
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 674 SNDSILSSQATLRRFSYLELLQATDNFAEN------NIIGRGGFGSVYGARLEDGMKIAI 727
N S+ S FS+ EL T+NF E N +G GGFG VY + + +A+
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAV 59
Query: 728 KVFHQQC---ASALKS-FEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGD 783
K LK F+ E +V+ K +H NL++++ S+ D LV YM NGSL D
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 784 WL 785
L
Sbjct: 120 RL 121
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 120/276 (43%), Gaps = 47/276 (17%)
Query: 337 LRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAIS-NLSN--LLTLVLER 393
LR L L+ NPL F P + K L L++ N ++ ++ + + LSN + L L
Sbjct: 173 LRKLDLSSNPLKEFSPGCFQTIGK-LFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLAN 231
Query: 394 NKLTGPISITFGRLQ--KLQGLYLASNNL--VGSFPDELCHIGRLAELALLDNRHSGSIP 449
N+L TF L+ L L L+ NNL VG +GS
Sbjct: 232 NQLLATSESTFSGLKWTNLTQLDLSYNNLHDVG----------------------NGSF- 268
Query: 450 SCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLS---------FDI 500
S L SLRYL L N + P +F+ L ++ + F ++S F
Sbjct: 269 ---SYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSF 325
Query: 501 GNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLA--YNRLEGPIPESFGDL--TSLEV 556
LK L +N+ +NN+ T GL L+++ L+ + L+ E+F L + L
Sbjct: 326 QWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLT 385
Query: 557 LNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEI 592
LNL+KN IS + L LR L+L NE+E ++
Sbjct: 386 LNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKL 421
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 116/300 (38%), Gaps = 60/300 (20%)
Query: 384 SNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFP-DELCHIGRLAELALLDN 442
S LLTL L +N ++ + TF L +L+ L L N + E + + E+ L N
Sbjct: 381 SPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYN 440
Query: 443 RHSGSIPSCVSNLTSLRYLYLG--SNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDI 500
++ S + + SL+ L L + + + PS F L+++ D S+N + +
Sbjct: 441 KYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLL 500
Query: 501 GNLKVLLGINLSENNLS--------GDMPATIGGLKDLQFMDLAYNRL-EGPI------- 544
L+ L ++ NNL+ G + GL L ++L N L E P+
Sbjct: 501 EGLENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNLESNGLDEIPVGVFKNLF 560
Query: 545 ----------------PESFGDLTSLEVLNLSKNKISGSIPKSMEKLFY------LRELN 582
P F D TSL LNL KN I+ S+EK + L L+
Sbjct: 561 ELKSINLGLNNLNKLEPFIFDDQTSLRSLNLQKNLIT-----SVEKDVFGPPFQNLNSLD 615
Query: 583 LSFNELEGEIPSGGIFANFTAE-----SFMGNELLCGLPN---------LQVQPCKVSKP 628
+ FN + S F N+ + S + LC P+ CK S P
Sbjct: 616 MRFNPFDCTCESISWFVNWINQTHTNISELSTHYLCNTPHHYYGFPLKLFDTSSCKDSAP 675
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 140/355 (39%), Gaps = 51/355 (14%)
Query: 257 LPT-VEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWXXXXX 315
LP+ + VL L N+ P++ T S+L +L+ G N+ S L P+ L
Sbjct: 23 LPSNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQIL---------- 72
Query: 316 XXXXXXXXXXXXXXXXANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGN 375
L+ L L N L + +L L + + SI
Sbjct: 73 -------------------PLLKVLNLQHNELSQISDQTFV-FCTNLTELDLMSNSIHKI 112
Query: 376 IPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGR-- 433
N NL+ L L N L+ T +L+ LQ L LA N ++ +EL +G
Sbjct: 113 KSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSS 172
Query: 434 LAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFT-FVIPSTFWSLKD--ILFFDFSSN 490
L +L L N P C + L L L + + + W L + I ++N
Sbjct: 173 LRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANN 232
Query: 491 FLVGTLSFDIGNLKV--LLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESF 548
L+ T LK L ++LS NNL + L L+++ L YN ++ P SF
Sbjct: 233 QLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSF 292
Query: 549 GDLTSLEVLNL----SKNKIS-GSIPK----SMEKLFYLRELNLSFNELEGEIPS 594
L++L L+L +K +S S P S + L YL LN+ + IPS
Sbjct: 293 YGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMD----DNNIPS 343
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 515 NLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEK 574
++ D+P+ I L +L +N+L P +F + L +L+ N IS P+ +
Sbjct: 18 HIPDDLPSNITVL------NLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQI 71
Query: 575 LFYLRELNLSFNELEGEIPSGGIF-ANFTAESFMGNEL 611
L L+ LNL NEL +F N T M N +
Sbjct: 72 LPLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSI 109
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 681 SQATLRRFSYLELLQATDNFAEN------NIIGRGGFGSVYGARLEDGMKIAIKVFHQQC 734
S FS+ EL T+NF E N +G GGFG VY + + +A+K
Sbjct: 2 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMV 60
Query: 735 ---ASALKS-FEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
LK F+ E +V+ K +H NL++++ S+ D LV YM NGSL D L
Sbjct: 61 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 115
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++EY+ GSL D+L +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQA 109
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++EY+ GSL D+L
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 105
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++EY+ GSL D+L
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 137
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++EY+ GSL D+L
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 110
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++EY+ GSL D+L
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 124
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++EY+ GSL D+L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 106
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++EY+ GSL D+L
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 104
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++EY+ GSL D+L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 106
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++EY+ GSL D+L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 106
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++EY+ GSL D+L
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 109
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++EY+ GSL D+L
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 107
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++EY+ GSL D+L
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 124
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++EY+ GSL D+L
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 111
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++EY+ GSL D+L
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 112
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++EY+ GSL D+L
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 113
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 706 IGRGGFGSVYGARL------EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKV 759
+G G FG V+ A +D M +A+K +A K F+ E E+L ++H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 760 ISSCSNDDFKALVLEYMSNGSLGDWLHS 787
C + D +V EYM +G L +L +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRA 110
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 706 IGRGGFGSVYGARL------EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKV 759
+G G FG V+ A +D M +A+K + SA + F+ E E+L ++H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 760 ISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
C+ +V EYM +G L +L S
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHG 115
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 706 IGRGGFGSVYGARL------EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKV 759
+G G FG V+ A +D M +A+K + SA + F+ E E+L ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 760 ISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
C+ +V EYM +G L +L S
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHG 138
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 706 IGRGGFGSVYGARL------EDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKV 759
+G G FG V+ A +D M +A+K + SA + F+ E E+L ++H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 760 ISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
C+ +V EYM +G L +L S
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHG 109
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 70/163 (42%), Gaps = 3/163 (1%)
Query: 436 ELALLDNRHSGSIPS-CVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVG 494
+L L N+ S S+PS LT LR LYL N+ + F LK++ + N L
Sbjct: 41 KLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQA 99
Query: 495 TLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSL 554
L L + L N L P L L ++ L YN L+ F LTSL
Sbjct: 100 LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSL 159
Query: 555 EVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGI 597
+ L L N++ + +KL L+ L L N+L+ +P G
Sbjct: 160 KELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEGAF 201
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 76/193 (39%), Gaps = 8/193 (4%)
Query: 371 SISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCH 430
+I NIP L L+ NKL+ S F RL KL+ LYL N L
Sbjct: 30 AIPSNIPADTKKLD------LQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKE 83
Query: 431 IGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSN 490
+ L L + DN+ L +L L L N+ + P F SL + + N
Sbjct: 84 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYN 143
Query: 491 FLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPE-SFG 549
L L L + L N L L +L+ + L N+L+ +PE +F
Sbjct: 144 ELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR-VPEGAFD 202
Query: 550 DLTSLEVLNLSKN 562
L L++L L +N
Sbjct: 203 SLEKLKMLQLQEN 215
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 62/155 (40%), Gaps = 1/155 (0%)
Query: 336 KLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNK 395
KLR L L N L LP+ I K+LETL + + + L NL L L+RN+
Sbjct: 62 KLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQ 120
Query: 396 LTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNL 455
L F L KL L L N L + L EL L +N+ L
Sbjct: 121 LKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKL 180
Query: 456 TSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSN 490
T L+ L L +N+ V F SL+ + N
Sbjct: 181 TELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 37 NASVCTWIGITC---------DVNSHRVTAL------DTSQFNLQG----TIPSQ-LGNL 76
N ++C G C D +S ++TA+ DT + +LQ ++PS+ L
Sbjct: 1 NEALCKKDGGVCSCNNNKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRL 60
Query: 77 SSLTILNLSHNKLSGSVPSSIYT-MHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNN 135
+ L +L L+ NKL ++P+ I+ + L+ L TDN+L + ++ ++RL N
Sbjct: 61 TKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRN 119
Query: 136 RLSGELPKNICNYLPHLKALFLDKNMFH 163
+L LP + + L L L L N
Sbjct: 120 QLKS-LPPRVFDSLTKLTYLSLGYNELQ 146
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 58 LDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIY-TMHTLKFLDFTDNQLSGS 116
LD +Q L+ P +L+ LT L+L +N+L S+P ++ + +LK L +NQL
Sbjct: 116 LDRNQ--LKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRV 172
Query: 117 VSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFH 163
++ + ++L NN+L +P+ + L LK L L +N +
Sbjct: 173 PEGAFDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQENPWD 218
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 76 LSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNN 135
L +L L L N+L P ++ L +L N+L ++S+ ++RL NN
Sbjct: 108 LVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNN 167
Query: 136 RLSGELPKNICNYLPHLKALFLDKNMFHGKIPSA 169
+L +P+ + L LK L LD N ++P
Sbjct: 168 QLK-RVPEGAFDKLTELKTLKLDNNQLK-RVPEG 199
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQ--CASALKSFEAECEVLKKIRHRNLIKVISSC 763
IG G FG+V+ A G +A+K+ +Q A + F E ++K++RH N++ + +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 764 SNDDFKALVLEYMSNGSLGDWLHSS 788
+ ++V EY+S GSL LH S
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKS 128
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQ--CASALKSFEAECEVLKKIRHRNLIKVISSC 763
IG G FG+V+ A G +A+K+ +Q A + F E ++K++RH N++ + +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 764 SNDDFKALVLEYMSNGSLGDWLHSS 788
+ ++V EY+S GSL LH S
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKS 128
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 5/206 (2%)
Query: 388 TLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGS 447
+L L+ ++ + S TF +LQ L L + +L G P + + L +L L N
Sbjct: 255 SLNLQEHRFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQL 313
Query: 448 IPSCVSNLTSLRYLYL-GSNRFTFVIPSTFWSLKDILFFDFSSNFLVGT--LSFDIGNLK 504
+N SL +LY+ G+ + + L ++ D S N + + S + NL
Sbjct: 314 CQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLS 373
Query: 505 VLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPES-FGDLTSLEVLNLSKNK 563
L +NLS N G L+ +DLA+ RL P+S F +L L+VLNL+
Sbjct: 374 HLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCF 433
Query: 564 ISGSIPKSMEKLFYLRELNLSFNELE 589
+ S + L LR LNL N +
Sbjct: 434 LDTSNQHLLAGLPVLRHLNLKGNHFQ 459
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 38/251 (15%)
Query: 378 QAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAEL 437
+ S L NL L L R ++ TF +L L L N L+ L L L
Sbjct: 48 RTFSRLMNLTFLDLTRCQINWIHEDTFQSHHQLSTLVLTGNPLIFMAETSLNGPKSLKHL 107
Query: 438 ALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFV-IPSTFWSLKDILFFDFSSNFLVGTL 496
L+ S V NL +L LYLGSN + + P F + +++ DF +N +
Sbjct: 108 FLIQTGISNLEFIPVHNLENLESLYLGSNHISSIKFPKDFPA-RNLKVLDFQNNAIHYIS 166
Query: 497 SFDIGNLK--VLLGINLSENNLS----GDMPATI------GGLKDLQFMDLAYNRLEGPI 544
D+ +L+ + L +N + NN+ G +TI GG +L + +N L+
Sbjct: 167 REDMRSLEQAINLSLNFNGNNVKGIELGAFDSTIFQSLNFGGTPNLSVI---FNGLQNST 223
Query: 545 PES-----FGDL---------------TSLEVLNLSKNKISGSIPKSMEKLFYLRELNLS 584
+S F D+ S+E LNL +++ S + + L+EL+L+
Sbjct: 224 TQSLWLGTFEDIDDEDISSAMLKGLCEMSVESLNLQEHRFSDISSTTFQCFTQLQELDLT 283
Query: 585 FNELEGEIPSG 595
L+G +PSG
Sbjct: 284 ATHLKG-LPSG 293
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 28/164 (17%)
Query: 433 RLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFL 492
+L EL L H +PS + L L+ L L N F D L ++NF
Sbjct: 276 QLQELDL-TATHLKGLPSGMKGLNLLKKLVLSVNHF------------DQLCQISAANFP 322
Query: 493 VGTLSFDIGNLKVL-LGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFG-- 549
T + GN+K L LG+ E L +LQ +DL++N +E S
Sbjct: 323 SLTHLYIRGNVKKLHLGVGCLEK------------LGNLQTLDLSHNDIEASDCCSLQLK 370
Query: 550 DLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIP 593
+L+ L+ LNLS N+ G ++ ++ L L+L+F L P
Sbjct: 371 NLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAP 414
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 15/107 (14%)
Query: 696 ATDNFAEN----NII-----GRGGFGSVYGARL------EDGMKIAIKVFHQQCASALKS 740
A D F ++ NI+ G G FG V+ A +D + +A+K +A K
Sbjct: 2 AMDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKD 61
Query: 741 FEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
F E E+L ++H +++K C D +V EYM +G L +L +
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRA 108
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGAR---LED--GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
+G+G FGSV R L+D G +A+K L+ FE E E+LK ++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 761 SSCSNDDFK--ALVLEYMSNGSLGDWLHS 787
C + + L++E++ GSL ++L
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQK 109
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V+EYMS GSL D+L
Sbjct: 85 EPI-YIVIEYMSKGSLLDFL 103
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KKIRH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V EYMS GSL D+L
Sbjct: 85 EPI-YIVTEYMSKGSLLDFL 103
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V+EYMS GSL D+L
Sbjct: 85 EPI-YIVIEYMSKGSLLDFL 103
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 688 FSYLELLQATDNFAEN------NIIGRGGFGSVYGARLEDGMKIAIKVFHQQC---ASAL 738
FS+ EL T+NF E N G GGFG VY + + +A+K L
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 739 KS-FEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
K F+ E +V K +H NL++++ S+ D LV Y NGSL D L
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL 112
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
+ +V EYMS GSL D+L
Sbjct: 75 EPI-XIVTEYMSKGSLLDFLKGET 97
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 661 YKLIECGKRSTVLSNDSILSSQATLRRFSYLELLQAT--DNFAENN-------IIGRGGF 711
Y+L G S L D +LS+Q L + S + L +A D + N+ IGRG F
Sbjct: 68 YRLEGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNF 127
Query: 712 GSVYGARLE-DGMKIAIKVFHQQCASALKS-FEAECEVLKKIRHRNLIKVISSCSNDDFK 769
G V+ RL D +A+K + LK+ F E +LK+ H N++++I C+
Sbjct: 128 GEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI 187
Query: 770 ALVLEYMSNGSL 781
+V+E + G
Sbjct: 188 YIVMELVQGGDF 199
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 661 YKLIECGKRSTVLSNDSILSSQATLRRFSYLELLQAT--DNFAENN-------IIGRGGF 711
Y+L G S L D +LS+Q L + S + L +A D + N+ IGRG F
Sbjct: 68 YRLEGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNF 127
Query: 712 GSVYGARLE-DGMKIAIKVFHQQCASALKS-FEAECEVLKKIRHRNLIKVISSCSNDDFK 769
G V+ RL D +A+K + LK+ F E +LK+ H N++++I C+
Sbjct: 128 GEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI 187
Query: 770 ALVLEYMSNGSL 781
+V+E + G
Sbjct: 188 YIVMELVQGGDF 199
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 703 NNIIGRGGFGSVYGARLE-DGMKI--AIKVFHQQCA-SALKSFEAECEVLKKI-RHRNLI 757
++IG G FG V AR++ DG+++ AIK + + + F E EVL K+ H N+I
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 758 KVISSCSNDDFKALVLEYMSNGSLGDWLHSS 788
++ +C + + L +EY +G+L D+L S
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKS 110
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 703 NNIIGRGGFGSVYGARLE-DGMKI--AIKVFHQQCA-SALKSFEAECEVLKKI-RHRNLI 757
++IG G FG V AR++ DG+++ AIK + + + F E EVL K+ H N+I
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 758 KVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
++ +C + + L +EY +G+L D+L S
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSR 121
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
+ +V EYMS GSL D+L
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGET 100
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 703 NNIIGRGGFGSVYGARLE-DGMKI--AIKVFHQQCA-SALKSFEAECEVLKKI-RHRNLI 757
++IG G FG V AR++ DG+++ AIK + + + F E EVL K+ H N+I
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 758 KVISSCSNDDFKALVLEYMSNGSLGDWLHSS 788
++ +C + + L +EY +G+L D+L S
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKS 117
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V EYMS GSL D+L
Sbjct: 251 EPI-YIVTEYMSKGSLLDFL 269
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V EYMS GSL D+L
Sbjct: 251 EPI-YIVTEYMSKGSLLDFL 269
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V EYMS GSL D+L
Sbjct: 74 EPI-YIVTEYMSKGSLLDFL 92
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V EYMS GSL D+L
Sbjct: 76 EPI-YIVTEYMSKGSLLDFL 94
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V EYMS GSL D+L
Sbjct: 85 EPI-YIVTEYMSKGSLLDFL 103
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V EYMS GSL D+L
Sbjct: 85 EPI-YIVTEYMSKGSLLDFL 103
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V EYMS GSL D+L
Sbjct: 85 EPI-YIVCEYMSKGSLLDFL 103
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V EYMS GSL D+L
Sbjct: 334 EPI-YIVTEYMSKGSLLDFL 352
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%)
Query: 426 DELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFF 485
DE L EL L +N S P +NL +LR L L SNR + F L ++
Sbjct: 50 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKL 109
Query: 486 DFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIP 545
D S N +V L + +L L + + +N+L GL L+ + L L
Sbjct: 110 DISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169
Query: 546 ESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLS 584
E+ L L VL L I+ S ++L+ L+ L +S
Sbjct: 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEIS 208
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 133/327 (40%), Gaps = 36/327 (11%)
Query: 264 ILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWXXXXXXXXXXXXX 323
+L + F +P I ++L L+LG N L D + +LE
Sbjct: 16 VLCHRKRFVAVPEGIPTETRL--LDLGKNRIKTLNQDEFASFPHLE-------------- 59
Query: 324 XXXXXXXXANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAI-SN 382
L+L N + P + NL +L TL + + + IP + +
Sbjct: 60 ---------------ELELNENIVSAVEPGAFNNLF-NLRTLGLRSNRLKL-IPLGVFTG 102
Query: 383 LSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDN 442
LSNL L + NK+ + F L L+ L + N+LV + L +L L +
Sbjct: 103 LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL-EK 161
Query: 443 RHSGSIPS-CVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIG 501
+ SIP+ +S+L L L L + +F L + + S + T++ +
Sbjct: 162 CNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCL 221
Query: 502 NLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSK 561
L ++++ NL+ + L L+F++L+YN + +L L+ + L
Sbjct: 222 YGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVG 281
Query: 562 NKISGSIPKSMEKLFYLRELNLSFNEL 588
+++ P + L YLR LN+S N+L
Sbjct: 282 GQLAVVEPYAFRGLNYLRVLNVSGNQL 308
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 529 DLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNEL 588
+ + +DL NR++ + F LE L L++N +S P + LF LR L L N L
Sbjct: 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92
Query: 589 EGEIPSG 595
+ IP G
Sbjct: 93 K-LIPLG 98
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ +++E+M+ G+L D+L N
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECN 109
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 452 VSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLS--FD-IGNLKVLLG 508
+ L ++RYL LG N+ + S L ++ + + N L + FD + NLK L+
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV- 115
Query: 509 INLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
L EN L L +L +++LA+N+L+ F LT+L L+LS N++ S+
Sbjct: 116 --LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SL 172
Query: 569 PKSM-EKLFYLRELNLSFNELEGEIPSGGIFANFTAESFM---GNELLCGLPNLQ 619
P+ + +KL L++L L N+L+ +P G+F T+ ++ N C P ++
Sbjct: 173 PEGVFDKLTQLKDLRLYQNQLKS-VPD-GVFDRLTSLQYIWLHDNPWDCTCPGIR 225
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 76 LSSLTILNLSHNKLSGSVPSSIYTMHT-LKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTN 134
L++LT LNL+HN+L S+P ++ T L LD + NQL ++ + D+RL
Sbjct: 132 LTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQ 190
Query: 135 NRLSGELPKNICNYLPHLKALFLDKNMFHGKIP 167
N+L +P + + L L+ ++L N + P
Sbjct: 191 NQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Query: 450 SCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGI 509
S + LT+L YL L N+ + F L ++ N L L L +
Sbjct: 79 SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138
Query: 510 NLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPES-FGDLTSLEVLNLSKNKISGSI 568
NL+ N L L +L +DL+YN+L+ +PE F LT L+ L L +N++ S+
Sbjct: 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLTQLKDLRLYQNQLK-SV 196
Query: 569 PKSM-EKLFYLRELNLSFNELEGEIP 593
P + ++L L+ + L N + P
Sbjct: 197 PDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 5/139 (3%)
Query: 337 LRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKL 396
L L L GN L LP+ + + +L+ LV+ + L+NL L L N+L
Sbjct: 87 LTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQL 145
Query: 397 TGPISITFGRLQKLQGLYLASNNLVGSFPDELC-HIGRLAELALLDNRHSGSIPSCV-SN 454
F +L L L L+ N L S P+ + + +L +L L N+ S+P V
Sbjct: 146 QSLPKGVFDKLTNLTELDLSYNQL-QSLPEGVFDKLTQLKDLRLYQNQLK-SVPDGVFDR 203
Query: 455 LTSLRYLYLGSNRFTFVIP 473
LTSL+Y++L N + P
Sbjct: 204 LTSLQYIWLHDNPWDCTCP 222
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 71 SQLGNLSSLTILNLSHNKLSGSVPSSIYTMHT-LKFLDFTDNQLSGSVSSFVFNMSSIVD 129
S L L++LT L L+ N+L S+P+ ++ T LK L +NQL ++++
Sbjct: 79 SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTY 137
Query: 130 IRLTNNRLSGELPKNICNYLPHLKALFLDKNMFH 163
+ L +N+L LPK + + L +L L L N
Sbjct: 138 LNLAHNQLQS-LPKGVFDKLTNLTELDLSYNQLQ 170
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 76 LSSLTILNLSHNKLSGSVPSSIYTMHT-LKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTN 134
L++L L L N+L S+P ++ T L +L+ NQL ++++ ++ L+
Sbjct: 108 LTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSY 166
Query: 135 NRLSGELPKNICNYLPHLKALFLDKNMF 162
N+L LP+ + + L LK L L +N
Sbjct: 167 NQLQS-LPEGVFDKLTQLKDLRLYQNQL 193
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V+EYMS G L D+L
Sbjct: 85 EPI-YIVMEYMSKGCLLDFL 103
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ +++E+M+ G+L D+L N
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECN 105
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ +++E+M+ G+L D+L N
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECN 104
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V EYMS GSL D+L
Sbjct: 251 EPI-YIVGEYMSKGSLLDFL 269
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ +++E+M+ G+L D+L N
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECN 102
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V EYMS GSL D+L
Sbjct: 252 EPI-YIVTEYMSKGSLLDFL 270
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ +++E+M+ G+L D+L N
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECN 104
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G FG VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECN 102
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ K+A+K Q S +F AE ++K+++H+ L+++ + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 766 DDFKALVLEYMSNGSLGDWLHS 787
+ ++ EYM NGSL D+L +
Sbjct: 76 EPI-YIITEYMENGSLVDFLKT 96
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
+ +V EYM+ GSL D+L
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGET 104
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
+ +V EYM+ GSL D+L
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGET 104
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ K+A+K Q S +F AE ++K+++H+ L+++ + +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ EYM NGSL D+L + +
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTPS 111
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 692 ELLQATDNFAENN---IIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEV 747
+LL+ + EN ++G+G +G VY R L + ++IAIK ++ + + E +
Sbjct: 13 DLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIAL 72
Query: 748 LKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
K ++H+N+++ + S S + F + +E + GSL L S
Sbjct: 73 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS 112
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ K+A+K Q S +F AE ++K+++H+ L+++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ EYM NGSL D+L + +
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPS 108
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ K+A+K Q S +F AE ++K+++H+ L+++ + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 766 DDFKALVLEYMSNGSLGDWLHS 787
+ ++ EYM NGSL D+L +
Sbjct: 75 EPI-YIITEYMENGSLVDFLKT 95
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ K+A+K Q S +F AE ++K+++H+ L+++ + +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ EYM NGSL D+L + +
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTPS 112
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ +V EYM G+L D+L N
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECN 123
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ K+A+K Q S +F AE ++K+++H+ L+++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 766 DDFKALVLEYMSNGSLGDWLHS 787
+ ++ EYM NGSL D+L +
Sbjct: 86 EPI-YIITEYMENGSLVDFLKT 106
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ K+A+K Q S +F AE ++K+++H+ L+++ + +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ EYM NGSL D+L + +
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTPS 104
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 699 NFAENNI-----IGRGGFGSVYGAR------LEDGMKIAIKVFHQQCASALKS-FEAECE 746
+ NNI IG G FG V+ AR E +A+K+ ++ ++ +++ F+ E
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 747 VLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
++ + + N++K++ C+ L+ EYM+ G L ++L S
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRS 143
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ K+A+K Q S +F AE ++K+++H+ L+++ + +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ EYM NGSL D+L + +
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTPS 110
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ K+A+K Q S +F AE ++K+++H+ L+++ + +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 766 DDFKALVLEYMSNGSLGDWLHS 787
+ ++ EYM NGSL D+L +
Sbjct: 85 EPI-YIITEYMENGSLVDFLKT 105
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ K+A+K Q S +F AE ++K+++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ EYM NGSL D+L + +
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS 102
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLK 749
LE D + ++G+G +G VY R L + ++IAIK ++ + + E + K
Sbjct: 1 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 60
Query: 750 KIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSS 788
++H+N+++ + S S + F + +E + GSL L S
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK 99
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ K+A+K Q S +F AE ++K+++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 766 DDFKALVLEYMSNGSLGDWLHS 787
+ ++ EYM NGSL D+L +
Sbjct: 80 EPI-YIITEYMENGSLVDFLKT 100
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN 109
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ K+A+K Q S +F AE ++K+++H+ L+++ + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 766 DDFKALVLEYMSNGSLGDWLHS 787
+ ++ EYM NGSL D+L +
Sbjct: 81 EPI-YIITEYMENGSLVDFLKT 101
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ K+A+K Q S +F AE ++K+++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 766 DDFKALVLEYMSNGSLGDWLHS 787
+ ++ EYM NGSL D+L +
Sbjct: 80 EPI-YIITEYMENGSLVDFLKT 100
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN 104
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN 109
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECN 105
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECN 108
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 703 NNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISS 762
++GRG FG V A+ +AIK + S K+F E L ++ H N++K+ +
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 763 CSNDDFKALVLEYMSNGSLGDWLHSSN 789
C N LV+EY GSL + LH +
Sbjct: 71 CLNP--VCLVMEYAEGGSLYNVLHGAE 95
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G+G FG V+ ++AIK S ++F E +V+KK+RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V EYMS G L D+L
Sbjct: 85 EPI-YIVTEYMSKGCLLDFL 103
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 102/248 (41%), Gaps = 20/248 (8%)
Query: 371 SISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCH 430
S+ IP + + L LE NKL F +L +L L L+SN L
Sbjct: 21 SVPTGIPSSATRLE------LESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSD 74
Query: 431 IGRLAELALLDNRHSGSIPSCVSNLTSLRYL----YLGSNRFTFVIPSTFWSLKDILFFD 486
G + L LD +G I + SN L L + SN S F SL+++++ D
Sbjct: 75 FGTTS-LKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 132
Query: 487 FSSNFLVGTLSFDIGNLKVLLGINLSENNLSGD-MPATIGGLKDLQFMDLAYNRLEGPIP 545
S + L L + ++ N+ + +P L++L F+DL+ +LE P
Sbjct: 133 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 192
Query: 546 ESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELE-------GEIPSGGIF 598
+F L+SL+VLN+S N + L L+ L+ S N + PS F
Sbjct: 193 TAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAF 252
Query: 599 ANFTAESF 606
N T F
Sbjct: 253 LNLTQNDF 260
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 337 LRSLKLAGNPL-DGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNK 395
L LK+AGN + FLP L ++L L ++ C + P A ++LS+L L + N
Sbjct: 152 LEVLKMAGNSFQENFLPDIFTEL-RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 210
Query: 396 LTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHI-GRLAELALLDN 442
+ + L LQ L + N+++ S EL H LA L L N
Sbjct: 211 FFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 258
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 55 VTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLS 114
+T LD SQ L+ P+ +LSSL +LN+SHN +++L+ LD++ N +
Sbjct: 177 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236
Query: 115 GS 116
S
Sbjct: 237 TS 238
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN 104
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN 106
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 703 NNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISS 762
++GRG FG V A+ +AIK + S K+F E L ++ H N++K+ +
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 763 CSNDDFKALVLEYMSNGSLGDWLHSSN 789
C N LV+EY GSL + LH +
Sbjct: 70 CLNP--VCLVMEYAEGGSLYNVLHGAE 94
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECN 117
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN 109
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECN 311
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 493 VGTLSFD--IGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGD 550
+G +S D G L L+ + L N L+G P G +Q + L N+++ + F
Sbjct: 41 LGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLG 100
Query: 551 LTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNE 610
L L+ LNL N+IS +P S E L L LNL+ N +S G
Sbjct: 101 LHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGA 160
Query: 611 LLCGLP 616
CG P
Sbjct: 161 ARCGAP 166
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%)
Query: 383 LSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDN 442
L +L+ L L+RN+LTG F +Q L L N + + +L L L DN
Sbjct: 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDN 112
Query: 443 RHSGSIPSCVSNLTSLRYLYLGSNRF 468
+ S +P +L SL L L SN F
Sbjct: 113 QISCVMPGSFEHLNSLTSLNLASNPF 138
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%)
Query: 404 FGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYL 463
FGRL L L L N L G P+ + EL L +N+ L L+ L L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 464 GSNRFTFVIPSTFWSLKDILFFDFSSN 490
N+ + V+P +F L + + +SN
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 54 RVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQL 113
+ L+ + L G P+ S + L L NK+ +H LK L+ DNQ+
Sbjct: 55 HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQI 114
Query: 114 SGSVSSFVFNMSSIVDIRLTNN 135
S + +++S+ + L +N
Sbjct: 115 SCVMPGSFEHLNSLTSLNLASN 136
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN 104
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN 106
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN 106
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN 109
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ K+AIK S +SF E +++KK++H L+++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 766 DDFKALVLEYMSNGSLGDWL 785
+ +V EYM+ GSL D+L
Sbjct: 76 EPI-YIVTEYMNKGSLLDFL 94
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECN 308
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN 104
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECN 350
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +G VY G + + +A+K + ++ F E V+K+I+H NL++++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ G+L D+L N
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECN 102
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 695 QATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKK 750
+ ++F N++G+G F VY A + G+++AIK+ ++ A ++ + E ++ +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
++H +++++ + + ++ LVLE NG + +L
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL 102
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ + K+A+K S +++F E ++K ++H L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
++ ++ EYM+ GSL D+L S
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDE 103
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 379 AISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELA 438
A + L +L TL L N+LT + F L KL+ L+L +N P E
Sbjct: 78 AFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNN------PIE----------- 120
Query: 439 LLDNRHSGSIPSCVSN-LTSLRYLYLGS-NRFTFVIPSTFWSLKDILFFDFSSNFLVGTL 496
SIPS N + SLR L LG R ++ + F L ++ + + L
Sbjct: 121 --------SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLK--- 169
Query: 497 SFDIGNLKVLLGINLSENNLSGDM-----PATIGGLKDLQFMDLAYNRLEGPIPESFGDL 551
DI NL L + L E LSG+ P + GL L+ + L + ++ +F DL
Sbjct: 170 --DIPNLTAL--VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDL 225
Query: 552 TSLEVLNLSKNKISGSIPKSM-EKLFYLRELNLSFN 586
SLE LNLS N + S+P + L L ++L+ N
Sbjct: 226 KSLEELNLSHNNLM-SLPHDLFTPLHRLERVHLNHN 260
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)
Query: 374 GNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNL----VGSFPDELC 429
+P +I N L L+ N + + TF L+ L+ L L+ N + VG+F
Sbjct: 27 AEVPASIP--VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG--- 81
Query: 430 HIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFW----SLKDILFF 485
+ L L L DNR + L+ LR L+L +N IPS + SL+ +
Sbjct: 82 -LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLG 139
Query: 486 DFSSNFLVGTLSFD-IGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPI 544
+ + +F+ + NL+ L NL NL D+P + L L+ ++L+ NRL+
Sbjct: 140 ELKRLEYISEAAFEGLVNLRYL---NLGMCNLK-DIP-NLTALVRLEELELSGNRLDLIR 194
Query: 545 PESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNEL 588
P SF LTSL L L +++ + + L L ELNLS N L
Sbjct: 195 PGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 509 INLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
+NL EN++ T L+ L+ + L+ N + +F L SL L L N+++
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 99
Query: 569 PKSMEKLFYLRELNLSFNELEGEIPS 594
++ E L LREL L N +E IPS
Sbjct: 100 TQAFEYLSKLRELWLRNNPIES-IPS 124
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 336 KLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNK 395
+L L+L+GN LD P S L+ SL L + + ++ A +L +L L L N
Sbjct: 179 RLEELELSGNRLDLIRPGSFQGLT-SLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 237
Query: 396 LTGPISITFGRLQKLQGLYLASN 418
L F L +L+ ++L N
Sbjct: 238 LMSLPHDLFTPLHRLERVHLNHN 260
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 706 IGRGGFGSVYGARLED---GMKIAIKVFH---QQCASALKSFEAECEVLKKIRHRNLIKV 759
+G GG +VY A ED +K+AIK ++ LK FE E ++ H+N++ +
Sbjct: 19 LGGGGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 760 ISSCSNDDFKALVLEYMSNGSLGDWLHS 787
I DD LV+EY+ +L +++ S
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYIES 104
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG+G FG V G K+A+K + ++F AE V+ ++RH NL++++
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 766 DDFKA-LVLEYMSNGSLGDWLHS 787
+ +V EYM+ GSL D+L S
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRS 93
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ A K+A+K S +++F AE V+K ++H L+K+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ GSL D+L S
Sbjct: 82 EPI-YIITEFMAKGSLLDFLKSDE 104
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 379 AISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELA 438
A + L +L TL L N+LT + F L KL+ L+L +N P E
Sbjct: 78 AFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNN------PIE----------- 120
Query: 439 LLDNRHSGSIPSCVSN-LTSLRYLYLGS-NRFTFVIPSTFWSLKDILFFDFSSNFLVGTL 496
SIPS N + SLR L LG R ++ + F L ++ + + L
Sbjct: 121 --------SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLK--- 169
Query: 497 SFDIGNLKVLLGINLSENNLSGDM-----PATIGGLKDLQFMDLAYNRLEGPIPESFGDL 551
DI NL L + L E LSG+ P + GL L+ + L + ++ +F DL
Sbjct: 170 --DIPNLTAL--VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDL 225
Query: 552 TSLEVLNLSKNKISGSIPKSM-EKLFYLRELNLSFN 586
SLE LNLS N + S+P + L L ++L+ N
Sbjct: 226 KSLEELNLSHNNLM-SLPHDLFTPLHRLERVHLNHN 260
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)
Query: 374 GNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNL----VGSFPDELC 429
+P +I N L L+ N + + TF L+ L+ L L+ N + VG+F
Sbjct: 27 AEVPASIP--VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG--- 81
Query: 430 HIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFW----SLKDILFF 485
+ L L L DNR + L+ LR L+L +N IPS + SL+ +
Sbjct: 82 -LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLG 139
Query: 486 DFSSNFLVGTLSFD-IGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPI 544
+ + +F+ + NL+ L NL NL D+P + L L+ ++L+ NRL+
Sbjct: 140 ELKRLEYISEAAFEGLVNLRYL---NLGMCNLK-DIP-NLTALVRLEELELSGNRLDLIR 194
Query: 545 PESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNEL 588
P SF LTSL L L +++ + + L L ELNLS N L
Sbjct: 195 PGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 509 INLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
+NL EN++ T L+ L+ + L+ N + +F L SL L L N+++
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 99
Query: 569 PKSMEKLFYLRELNLSFNELEGEIPS 594
++ E L LREL L N +E IPS
Sbjct: 100 TQAFEYLSKLRELWLRNNPIES-IPS 124
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 336 KLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNK 395
+L L+L+GN LD P S L+ SL L + + ++ A +L +L L L N
Sbjct: 179 RLEELELSGNRLDLIRPGSFQGLT-SLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 237
Query: 396 LTGPISITFGRLQKLQGLYLASN 418
L F L +L+ ++L N
Sbjct: 238 LMSLPHDLFTPLHRLERVHLNHN 260
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 656 TLALKYKLIECGKRSTVLSNDSILSSQATLRRFSYLELLQATDNFAENNIIGRGGFGSVY 715
T +K K++E TV + D S L L+LLQ IG+G FG V
Sbjct: 165 TRLIKPKVME----GTVAAQDEFYRSGWALN-MKELKLLQT---------IGKGEFGDVM 210
Query: 716 GARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFK-ALVLE 774
G K+A+K + ++F AE V+ ++RH NL++++ + +V E
Sbjct: 211 LGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267
Query: 775 YMSNGSLGDWLHS 787
YM+ GSL D+L S
Sbjct: 268 YMAKGSLVDYLRS 280
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 448 IPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLL 507
+ S S+ T L L L N + + FW L +L + S NFL S NL L
Sbjct: 291 LKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLE 350
Query: 508 GINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGS 567
++LS N++ + GL +L+ + L N+L+ F LTSL+ + L N S
Sbjct: 351 VLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410
Query: 568 IPK 570
P+
Sbjct: 411 CPR 413
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 362 LETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLV 421
LE L +A I+ A L++LL L L +N L S F L KL+ L L+ N++
Sbjct: 301 LEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIR 360
Query: 422 GSFPDELCHIGRLAELALLDNRHSGSIPSCV-SNLTSLRYLYLGSNRFTFVIP 473
+ L ELAL D S+P + LTSL+ ++L +N + P
Sbjct: 361 ALGDQSFLGLPNLKELAL-DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 509 INLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
+ L++N ++ GL L ++L+ N L F +L LEVL+LS N I
Sbjct: 304 LTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALG 363
Query: 569 PKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNELLCGLPNLQVQPCKVSKP 628
+S L L+EL L N+L+ +P GIF T+ + L P S P
Sbjct: 364 DQSFLGLPNLKELALDTNQLKS-VPD-GIFDRLTSLQKIW---------LHTNPWDCSCP 412
Query: 629 RTEHKSR 635
R ++ SR
Sbjct: 413 RIDYLSR 419
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 510 NLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIP 569
+LS++ + + + DL+ + LA N + +F LT L LNLS+N + GSI
Sbjct: 281 DLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL-GSID 339
Query: 570 KSM-EKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNELLCGLPNLQ 619
M E L L L+LS+N + +G++ GLPNL+
Sbjct: 340 SRMFENLDKLEVLDLSYNHIRA----------------LGDQSFLGLPNLK 374
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG V+ + K+AIK + S + F E EV+ K+ H L+++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
LV E+M +G L D+L +
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQR 95
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG V+ + K+AIK + S + F E EV+ K+ H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
LV E+M +G L D+L +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQR 97
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG V+ + K+AIK + S + F E EV+ K+ H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
LV E+M +G L D+L +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQR 97
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG V+ + K+AIK + S + F E EV+ K+ H L+++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
LV E+M +G L D+L +
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQR 100
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 87/210 (41%), Gaps = 44/210 (20%)
Query: 453 SNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLS 512
SN+ + G+ + PS + L DFS+N L T+ + G+L L + L
Sbjct: 300 SNMNIKNFTVSGTRMVHMLCPS---KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQ 356
Query: 513 ENNLS--GDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLT------------------ 552
N L + +K LQ +D++ N + E GD +
Sbjct: 357 MNQLKELSKIAEMTTQMKSLQQLDISQNSVS--YDEKKGDCSWTKSLLSLNMSSNILTDT 414
Query: 553 -------SLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAES 605
++VL+L NKI SIPK + KL L+ELN++ N+L+ +P GIF T+
Sbjct: 415 IFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VP-DGIFDRLTSLQ 471
Query: 606 FMGNELLCGLPNLQVQPCKVSKPRTEHKSR 635
+ L P S PR ++ SR
Sbjct: 472 KIW---------LHTNPWDCSCPRIDYLSR 492
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 509 INLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
+N+S+N +S + I L L+ + +++NR++ F LE L+LS NK+ +
Sbjct: 26 LNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKL---V 82
Query: 569 PKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMG 608
S L+ L+LSFN + +P F N + F+G
Sbjct: 83 KISCHPTVNLKHLDLSFNAFDA-LPICKEFGNMSQLKFLG 121
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 28/114 (24%)
Query: 455 LTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSEN 514
L+ LR L + NR ++ S F +++ + D S N LV NLK
Sbjct: 44 LSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCHPTVNLK---------- 93
Query: 515 NLSGDMPATIGGLKDLQFMDLAYNRLEG-PIPESFGDLTSLEVLNLSKNKISGS 567
+DL++N + PI + FG+++ L+ L LS + S
Sbjct: 94 -----------------HLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS 130
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ A K+A+K + + ++++F AE V+K ++H L+K+ + +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ GSL D+L S
Sbjct: 249 EPI-YIITEFMAKGSLLDFLKSDE 271
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ + K+A+K S +++F E ++K ++H L+++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
++ ++ E+M+ GSL D+L S
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDE 102
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 461 LYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDM 520
LYL N+FT V P + K + D S+N + + N+ LL + LS N L
Sbjct: 36 LYLDGNQFTLV-PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 94
Query: 521 PATIGGLKDLQFMDLAYNRLEGPIPE-SFGDLTSLEVLNLSKNKI 564
P T GLK L+ + L N + +PE +F DL++L L + N +
Sbjct: 95 PRTFDGLKSLRLLSLHGNDISV-VPEGAFNDLSALSHLAIGANPL 138
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Query: 451 CVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGIN 510
C + T L + SN+ V+P L+ D + LV ++ N K L I+
Sbjct: 4 CPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTLVPK---ELSNYKHLTLID 60
Query: 511 LSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPK 570
LS N +S + + L + L+YNRL P +F L SL +L+L N IS
Sbjct: 61 LSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEG 120
Query: 571 SMEKLFYLRELNLSFNEL 588
+ L L L + N L
Sbjct: 121 AFNDLSALSHLAIGANPL 138
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 335 KKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERN 394
+ + L L GN +P + N K L + ++N IS Q+ SN++ LLTL+L N
Sbjct: 31 RDVTELYLDGNQFT-LVPKELSNY-KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88
Query: 395 KLTGPISITFGRLQKLQGLYLASNNLV----GSFPD 426
+L TF L+ L+ L L N++ G+F D
Sbjct: 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFND 124
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 413 LYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVI 472
LYL N P EL + L + L +NR S SN+T L L L NR +
Sbjct: 36 LYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 94
Query: 473 PSTFWSLKDILFFDFSSN 490
P TF LK + N
Sbjct: 95 PRTFDGLKSLRLLSLHGN 112
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 58 LDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQL 113
LD +QF L +P +L N LT+++LS+N++S S M L L + N+L
Sbjct: 38 LDGNQFTL---VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V+ A K+A+K S +++F AE V+K ++H L+K+ + +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ E+M+ GSL D+L S
Sbjct: 255 EPI-YIITEFMAKGSLLDFLKSDE 277
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 433 RLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVI---PSTFWSLKDILFFDFSS 489
R+ EL L H +PS + + SL+ L L +N F + ++F SL+D+
Sbjct: 278 RVQELDLTA-AHLNGLPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMR 336
Query: 490 NFLVGTLSFDIGNLKVLLGINLSENNLSGD--MPATIGGLKDLQFMDLAYNRLEGPIPES 547
+GT + L+ L ++LS +++ + L+ LQ+++L+YN G ++
Sbjct: 337 KLDLGTRCLE--KLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQA 394
Query: 548 FGDLTSLEVLNLSKNKISGSIPKS-MEKLFYLRELNLS 584
F + LE+L+++ + P S + L LR LNLS
Sbjct: 395 FKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLS 432
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 332 ANCKKLRSLKLAGNPL-DGFL-PSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTL 389
A + LR L L GN DG + +++ + SLE L++++C++ QA L N+ L
Sbjct: 445 AGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHL 504
Query: 390 VLERNKLTGPISITFGRLQKLQGLYL--ASNNL 420
L N LTG + L L+GLYL ASNN+
Sbjct: 505 DLSHNSLTGD---SMDALSHLKGLYLNMASNNI 534
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 19/224 (8%)
Query: 378 QAISNLSNLLTLVLERNKLTGP--ISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLA 435
+ + L NL L L + + ++ L+ LQ L L+ N +G D+
Sbjct: 343 RCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLG-LEDQA--FKECP 399
Query: 436 ELALLD----NRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSN- 490
+L LLD + H + S NL LR L L L+D+ + N
Sbjct: 400 QLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNS 459
Query: 491 FLVGTLSFD-----IGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIP 545
F G++S +G+L++L+ LS NL GL+++ +DL++N L G
Sbjct: 460 FQDGSISKTNLLQMVGSLEILI---LSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTGDSM 516
Query: 546 ESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELE 589
++ L L LN++ N I P + L +NLS N L+
Sbjct: 517 DALSHLKGL-YLNMASNNIRIIPPHLLPALSQQSIINLSHNPLD 559
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 97/248 (39%), Gaps = 34/248 (13%)
Query: 379 AISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELA 438
S L NL+ L L R ++ TF +L + L N L+ L L L
Sbjct: 51 TFSRLINLIFLDLTRCQINWVHEDTFQSHHQLNTIVLTGNPLIFMAETSLTGPKFLKHLF 110
Query: 439 LLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFV-IPSTFWSLKDILFFDFSSNFLVGTLS 497
L S V NL +L L+LGSN + + +P F + +++ DF +N +
Sbjct: 111 LTQTGISNLEFIPVHNLENLESLHLGSNHISSINLPENFPT-QNLKVLDFQNNAIHYISR 169
Query: 498 FDIGNLKVL--LGINLSENNLSGDMPAT----------IGG-------LKDLQ------- 531
D +L+ L +N + N++ G P GG K LQ
Sbjct: 170 KDTNSLEQATNLSLNFNGNDIKGIEPGAFISKIFQSLKFGGSLNLFIIFKGLQNSTLQSL 229
Query: 532 ----FMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNE 587
F D L E D+ S+E +NL K++ S + ++EL+L+
Sbjct: 230 WLGTFEDTDDQYLTSATFEGLCDM-SVESINLQKHRFSDLSSSTFRCFTRVQELDLTAAH 288
Query: 588 LEGEIPSG 595
L G +PSG
Sbjct: 289 LNG-LPSG 295
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G G V+ K+A+K Q S +F AE ++K+++H+ L+++ + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
+ ++ EYM NGSL D+L + +
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS 102
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 474 STFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGD-MPATIGGLKDLQF 532
S F SL+++++ D S + L L + ++ N+ + +P L++L F
Sbjct: 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474
Query: 533 MDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSM-EKLFYLRELNLSFNELEGE 591
+DL+ +LE P +F L+SL+VLN++ N++ S+P + ++L L+++ L N +
Sbjct: 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 533
Query: 592 IP 593
P
Sbjct: 534 CP 535
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 338 RSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLT 397
++L L+ NPL S + + L+ L ++ C I A +LS+L TL+L N +
Sbjct: 31 KNLDLSFNPLRHLGSYSFFSFPE-LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89
Query: 398 GPISITFGRLQKLQGLYLASNNLVG--SFPDELCHIGRLAELALLDNR-HSGSIPSCVSN 454
F L LQ L NL +FP + H+ L EL + N S +P SN
Sbjct: 90 SLALGAFSGLSSLQKLVAVETNLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSN 147
Query: 455 LTSLRYLYLGSNR 467
LT+L +L L SN+
Sbjct: 148 LTNLEHLDLSSNK 160
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 337 LRSLKLAGNPL-DGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNK 395
L LK+AGN + FLP L ++L L ++ C + P A ++LS+L L + N+
Sbjct: 447 LEVLKMAGNSFQENFLPDIFTEL-RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505
Query: 396 LTGPISITFGRLQKLQGLYLASNNLVGSFP 425
L F RL LQ ++L +N S P
Sbjct: 506 LKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 513 ENNLSGDMPATIGGLKDLQFMDLAYNRLEG-PIPESFGDLTSLEVLNLSKNKI 564
E NL+ IG LK L+ +++A+N ++ +PE F +LT+LE L+LS NKI
Sbjct: 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 55 VTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIY 98
+T LD SQ L+ P+ +LSSL +LN++ N+L SVP I+
Sbjct: 472 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK-SVPDGIF 514
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 487 FSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPE 546
F NFL + L+ L ++LS+ L P L LQ +++A N+L+
Sbjct: 457 FQENFLPDIFT----ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDG 512
Query: 547 SFGDLTSLEVLNLSKNKISGSIPK 570
F LTSL+ + L N S P+
Sbjct: 513 IFDRLTSLQKIWLHTNPWDCSCPR 536
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 58 LDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYT-MHTLKFLDFTDNQLSGS 116
LD S + + LSSL +L ++ N + I+T + L FLD + QL
Sbjct: 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-Q 484
Query: 117 VSSFVFN-MSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIP 167
+S FN +SS+ + + +N+L +P I + L L+ ++L N + P
Sbjct: 485 LSPTAFNSLSSLQVLNMASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 535
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG+G FG V G K+A+K + ++F AE V+ ++RH NL++++
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 766 DDFK-ALVLEYMSNGSLGDWLHS 787
+ +V EYM+ GSL D+L S
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRS 99
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 35/213 (16%)
Query: 379 AISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELA 438
A + L+NL TL L N+LT + F L KL+ L+L +N P E
Sbjct: 107 AFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNN------PIE----------- 149
Query: 439 LLDNRHSGSIPSCVSN-LTSLRYLYLGS-NRFTFVIPSTFWSLKDILFFDFSSNFLVGTL 496
SIPS N + SLR L LG R +++ F L ++ + + + L
Sbjct: 150 --------SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL---- 197
Query: 497 SFDIGNLKVLLG---INLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTS 553
+I NL L+ ++LS N+LS P + GL LQ + + ++++ +F +L S
Sbjct: 198 -REIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQS 256
Query: 554 LEVLNLSKNKISGSIPKSMEKLFYLRELNLSFN 586
L +NL+ N ++ L +L ++L N
Sbjct: 257 LVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 706 IGRGGFGSVYGAR-LEDGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
IG+G F V AR + G ++A+K+ Q +S+L+ E ++K + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 763 CSNDDFKALVLEYMSNGSLGDWL 785
+ LV+EY S G + D+L
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL 104
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG+G FG V G K+A+K + ++F AE V+ ++RH NL++++
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 766 DDFK-ALVLEYMSNGSLGDWLHS 787
+ +V EYM+ GSL D+L S
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRS 108
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 99/241 (41%), Gaps = 36/241 (14%)
Query: 358 LSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLAS 417
+S L + N IS L +L LVL NK++ F L+KLQ LY++
Sbjct: 52 ISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111
Query: 418 NNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFW 477
N+LV P L L EL + DNR S L ++ + +G N
Sbjct: 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLE-------- 160
Query: 478 SLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSG---DMPATIGGLKDLQFMD 534
+S F G +FD L L +SE L+G D+P T+ L
Sbjct: 161 ----------NSGFEPG--AFDGLKLNYL---RISEAKLTGIPKDLPETLNELH------ 199
Query: 535 LAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPS 594
L +N+++ E + L L L N+I S+ L LREL+L N+L +P+
Sbjct: 200 LDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL-SRVPA 258
Query: 595 G 595
G
Sbjct: 259 G 259
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Query: 335 KKLRSLKLAGNPLD--GFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLE 392
+ + +++ GNPL+ GF P + L L L I+ ++G IP+ + N L L+
Sbjct: 147 RNMNCIEMGGNPLENSGFEPGAFDGLK--LNYLRISEAKLTG-IPKDLPETLN--ELHLD 201
Query: 393 RNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCV 452
NK+ R KL L L N + L + L EL L DN +P+ +
Sbjct: 202 HNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHL-DNNKLSRVPAGL 260
Query: 453 SNLTSLRYLYLGSNRFTFV 471
+L L+ +YL +N T V
Sbjct: 261 PDLKLLQVVYLHTNNITKV 279
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 455 LTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLS---------FDIGNLKV 505
L L Y +L N + + L ++ + + +F ++S F LK
Sbjct: 281 LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKC 340
Query: 506 LLGINLSENNLSGDMPATIGGLKDLQFMDLA--YNRLEGPIPESFGDL--TSLEVLNLSK 561
L +N+ +N++ G GL +L+++ L+ + L E+F L + L +LNL+K
Sbjct: 341 LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTK 400
Query: 562 NKISGSIPKSMEKLFYLRELNLSFNELEGEI 592
NKIS + L +L L+L NE+ E+
Sbjct: 401 NKISKIESDAFSWLGHLEVLDLGLNEIGQEL 431
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 456 TSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVG-----TLSFDIGNLKVLLGIN 510
+SL+ L L SN+ P F ++ LF F +N +G L ++ N + ++
Sbjct: 181 SSLKKLELSSNQIKEFSPGCFHAIGR-LFGLFLNNVQLGPSLTEKLCLELANTSIR-NLS 238
Query: 511 LSENNLSGDMPATIGGLK--DLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
LS + LS T GLK +L +DL+YN L +SF L LE L N I
Sbjct: 239 LSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLF 298
Query: 569 PKSMEKLFYLRELNL 583
S+ LF +R LNL
Sbjct: 299 SHSLHGLFNVRYLNL 313
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 513 ENNLSGDMPATI-GGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKS 571
E+N ++P + L +L+ +DL N L F + SL+ LNL KN I+ K
Sbjct: 554 ESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKV 613
Query: 572 MEKLFY-LRELNLSFNELEGEIPSGGIFANFTAESF-----MGNELLCGLP 616
F L EL++ FN + S F N+ E+ + + LC P
Sbjct: 614 FGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTP 664
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 140/352 (39%), Gaps = 49/352 (13%)
Query: 257 LPT-VEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWXXXXX 315
LPT + VL L N+ ++ T S+LT L++G NT S L P+ L L+
Sbjct: 33 LPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK-----V 87
Query: 316 XXXXXXXXXXXXXXXXANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGN 375
A C L L L N + + K+L TL +++ +S
Sbjct: 88 LNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVK-QKNLITLDLSHNGLSST 146
Query: 376 IPQAISNLSNLLTLVLERNKLTGPISITFGRL--QKLQGLYLASNNLVGSFPDELCHIGR 433
L NL L+L NK+ S L+ L L+SN + P IGR
Sbjct: 147 KLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGR 206
Query: 434 LAELALLDNRHSGSIPSCVSNL------TSLRYLYLGSNRFTFVIPSTFWSLKDILFFDF 487
L L L+N G PS L TS+R L L +++ + +TF LK
Sbjct: 207 LFGL-FLNNVQLG--PSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLK------- 256
Query: 488 SSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPES 547
NL +L +LS NNL+ + L L++ L YN ++ S
Sbjct: 257 ------------WTNLTML---DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHS 301
Query: 548 FGDLTSLEVLNL----SKNKIS-GSIPK----SMEKLFYLRELNLSFNELEG 590
L ++ LNL +K IS S+PK S + L L LN+ N++ G
Sbjct: 302 LHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 353
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 706 IGRGGFGSVYGAR-LEDGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
IG+G F V AR + G ++A+K+ Q +S+L+ E ++K + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 763 CSNDDFKALVLEYMSNGSLGDWL 785
+ LV+EY S G + D+L
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL 104
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 706 IGRGGFGSVYGAR-LEDGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
IG+G F V AR + G ++A+K+ Q +S+L+ E ++K + H N++K+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 763 CSNDDFKALVLEYMSNGSLGDWL 785
+ LV+EY S G + D+L
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYL 97
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 706 IGRGGFGSV----YGARLED-GMKIAIKVFHQQCASALKS-FEAECEVLKKIRHRNLIKV 759
+G G FG V Y + G +A+K + C L+S ++ E E+L+ + H +++K
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 760 ISSCSNDDFKA--LVLEYMSNGSLGDWL 785
C + K+ LV+EY+ GSL D+L
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL 104
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 455 LTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLS---------FDIGNLKV 505
L L Y +L N + + L ++ + + +F ++S F LK
Sbjct: 276 LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKC 335
Query: 506 LLGINLSENNLSGDMPATIGGLKDLQFMDLA--YNRLEGPIPESFGDL--TSLEVLNLSK 561
L +N+ +N++ G GL +L+++ L+ + L E+F L + L +LNL+K
Sbjct: 336 LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTK 395
Query: 562 NKISGSIPKSMEKLFYLRELNLSFNELEGEI 592
NKIS + L +L L+L NE+ E+
Sbjct: 396 NKISKIESDAFSWLGHLEVLDLGLNEIGQEL 426
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 456 TSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVG-----TLSFDIGNLKVLLGIN 510
+SL+ L L SN+ P F ++ LF F +N +G L ++ N + ++
Sbjct: 176 SSLKKLELSSNQIKEFSPGCFHAIGR-LFGLFLNNVQLGPSLTEKLCLELANTSIR-NLS 233
Query: 511 LSENNLSGDMPATIGGLK--DLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
LS + LS T GLK +L +DL+YN L +SF L LE L N I
Sbjct: 234 LSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLF 293
Query: 569 PKSMEKLFYLRELNL 583
S+ LF +R LNL
Sbjct: 294 SHSLHGLFNVRYLNL 308
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 16/135 (11%)
Query: 513 ENNLSGDMPATI-GGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKS 571
E+N ++P + L +L+ +DL N L F + SL+ LNL KN I+ K
Sbjct: 549 ESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKV 608
Query: 572 MEKLFY-LRELNLSFNELEGEIPSGGIFANFTAESF-----MGNELLCGLPN-------- 617
F L EL++ FN + S F N+ E+ + + LC P
Sbjct: 609 FGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVR 668
Query: 618 -LQVQPCKVSKPRTE 631
CK S P E
Sbjct: 669 LFDTSSCKDSAPFEE 683
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 140/352 (39%), Gaps = 49/352 (13%)
Query: 257 LPT-VEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWXXXXX 315
LPT + VL L N+ ++ T S+LT L++G NT S L P+ L L+
Sbjct: 28 LPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK-----V 82
Query: 316 XXXXXXXXXXXXXXXXANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGN 375
A C L L L N + + K+L TL +++ +S
Sbjct: 83 LNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVK-QKNLITLDLSHNGLSST 141
Query: 376 IPQAISNLSNLLTLVLERNKLTGPISITFGRL--QKLQGLYLASNNLVGSFPDELCHIGR 433
L NL L+L NK+ S L+ L L+SN + P IGR
Sbjct: 142 KLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGR 201
Query: 434 LAELALLDNRHSGSIPSCVSNL------TSLRYLYLGSNRFTFVIPSTFWSLKDILFFDF 487
L L L+N G PS L TS+R L L +++ + +TF LK
Sbjct: 202 LFGL-FLNNVQLG--PSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLK------- 251
Query: 488 SSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPES 547
NL +L +LS NNL+ + L L++ L YN ++ S
Sbjct: 252 ------------WTNLTML---DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHS 296
Query: 548 FGDLTSLEVLNL----SKNKIS-GSIPK----SMEKLFYLRELNLSFNELEG 590
L ++ LNL +K IS S+PK S + L L LN+ N++ G
Sbjct: 297 LHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 348
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 699 NFAENNIIGRGGFGSVY-GARLEDGMKIAIK---VFHQQCASALKSFEAECEVLKKIRHR 754
NF IGRG F VY A L DG+ +A+K +F A A E ++LK++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 755 NLIKVISSCSNDDFKALVLEYMSNGSL 781
N+IK +S D+ +VLE G L
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDL 119
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 706 IGRGGFGSV----YGARLED-GMKIAIKVFHQQCASALKS-FEAECEVLKKIRHRNLIKV 759
+G G FG V Y + G +A+K + C L+S ++ E E+L+ + H +++K
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 760 ISSCSNDDFKA--LVLEYMSNGSLGDWL 785
C + K+ LV+EY+ GSL D+L
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL 103
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 455 LTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLS---------FDIGNLKV 505
L L Y +L N + + L ++ + + +F ++S F LK
Sbjct: 271 LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKC 330
Query: 506 LLGINLSENNLSGDMPATIGGLKDLQFMDLA--YNRLEGPIPESFGDL--TSLEVLNLSK 561
L +N+ +N++ G GL +L+++ L+ + L E+F L + L +LNL+K
Sbjct: 331 LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTK 390
Query: 562 NKISGSIPKSMEKLFYLRELNLSFNELEGEI 592
NKIS + L +L L+L NE+ E+
Sbjct: 391 NKISKIESDAFSWLGHLEVLDLGLNEIGQEL 421
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 456 TSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVG-----TLSFDIGNLKVLLGIN 510
+SL+ L L SN+ P F ++ LF F +N +G L ++ N + ++
Sbjct: 171 SSLKKLELSSNQIKEFSPGCFHAIGR-LFGLFLNNVQLGPSLTEKLCLELANTSIR-NLS 228
Query: 511 LSENNLSGDMPATIGGLK--DLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
LS + LS T GLK +L +DL+YN L +SF L LE L N I
Sbjct: 229 LSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLF 288
Query: 569 PKSMEKLFYLRELNL 583
S+ LF +R LNL
Sbjct: 289 SHSLHGLFNVRYLNL 303
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 513 ENNLSGDMPATI-GGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKS 571
E+N ++P + L +L+ +DL N L F + SL+ LNL KN I+ K
Sbjct: 544 ESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKV 603
Query: 572 MEKLFY-LRELNLSFNELEGEIPSGGIFANFTAESF-----MGNELLCGLP 616
F L EL++ FN + S F N+ E+ + + LC P
Sbjct: 604 FGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTP 654
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 140/352 (39%), Gaps = 49/352 (13%)
Query: 257 LPT-VEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNLEWXXXXX 315
LPT + VL L N+ ++ T S+LT L++G NT S L P+ L L+
Sbjct: 23 LPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK-----V 77
Query: 316 XXXXXXXXXXXXXXXXANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGN 375
A C L L L N + + K+L TL +++ +S
Sbjct: 78 LNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVK-QKNLITLDLSHNGLSST 136
Query: 376 IPQAISNLSNLLTLVLERNKLTGPISITFGRL--QKLQGLYLASNNLVGSFPDELCHIGR 433
L NL L+L NK+ S L+ L L+SN + P IGR
Sbjct: 137 KLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGR 196
Query: 434 LAELALLDNRHSGSIPSCVSNL------TSLRYLYLGSNRFTFVIPSTFWSLKDILFFDF 487
L L L+N G PS L TS+R L L +++ + +TF LK
Sbjct: 197 LFGL-FLNNVQLG--PSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLK------- 246
Query: 488 SSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPES 547
NL +L +LS NNL+ + L L++ L YN ++ S
Sbjct: 247 ------------WTNLTML---DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHS 291
Query: 548 FGDLTSLEVLNL----SKNKIS-GSIPK----SMEKLFYLRELNLSFNELEG 590
L ++ LNL +K IS S+PK S + L L LN+ N++ G
Sbjct: 292 LHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 706 IGRGGFGSVYGAR-LEDGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
IG+G F V AR + G ++A+K+ Q +S+L+ E ++K + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 763 CSNDDFKALVLEYMSNGSLGDWL 785
+ LV+EY S G + D+L
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL 104
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG V+ + K+AIK + S + F E EV+ K+ H L+++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
LV E+M +G L D+L +
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQR 98
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG V+ + K+AIK + S F E EV+ K+ H L+++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
LV E+M +G L D+L +
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQR 117
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 91/245 (37%), Gaps = 26/245 (10%)
Query: 375 NIPQA-ISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCH-IG 432
++P A NL L L N L + F L L+ L L+ N + S H +G
Sbjct: 45 HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLG 104
Query: 433 RLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFL 492
RL L L P L +L+YLYL N + TF
Sbjct: 105 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTF---------------- 148
Query: 493 VGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLT 552
D+GNL L L N +S GL L + L NR+ P +F DL
Sbjct: 149 -----RDLGNLTHLF---LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 200
Query: 553 SLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNELL 612
L L L N +S +++ L L+ L L+ N + + ++A +E+
Sbjct: 201 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVP 260
Query: 613 CGLPN 617
C LP
Sbjct: 261 CSLPQ 265
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 45/109 (41%)
Query: 361 SLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNL 420
+L+ L + + ++ +L NL L L N+++ F L L L L N +
Sbjct: 129 ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 188
Query: 421 VGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFT 469
P +GRL L L N S ++ L +L+YL L N +
Sbjct: 189 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 237
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + ++ + +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + ++ + +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + ++ + +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 699 NFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHRN 755
N+ IG+G F V AR + G ++A+K+ Q ++L+ E ++K + H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
++K+ + LV+EY S G + D+L
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYL 105
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + ++ + +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 91/245 (37%), Gaps = 26/245 (10%)
Query: 375 NIPQA-ISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCH-IG 432
++P A NL L L N L + F L L+ L L+ N + S H +G
Sbjct: 46 HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLG 105
Query: 433 RLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFL 492
RL L L P L +L+YLYL N + TF
Sbjct: 106 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTF---------------- 149
Query: 493 VGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLT 552
D+GNL L L N +S GL L + L NR+ P +F DL
Sbjct: 150 -----RDLGNLTHLF---LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 201
Query: 553 SLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNELL 612
L L L N +S +++ L L+ L L+ N + + ++A +E+
Sbjct: 202 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVP 261
Query: 613 CGLPN 617
C LP
Sbjct: 262 CSLPQ 266
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 45/109 (41%)
Query: 361 SLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNL 420
+L+ L + + ++ +L NL L L N+++ F L L L L N +
Sbjct: 130 ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189
Query: 421 VGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFT 469
P +GRL L L N S ++ L +L+YL L N +
Sbjct: 190 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + ++ + +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 706 IGRGGFGSVYGAR-LEDGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
IG+G F V AR + G ++A+++ Q +S+L+ E ++K + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 763 CSNDDFKALVLEYMSNGSLGDWL 785
+ LV+EY S G + D+L
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL 104
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + ++ + +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + ++ + +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 452 VSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLS--FD-IGNLKVLLG 508
+ L ++RYL LG N+ + S L ++ + + N L + FD + NLK L+
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV- 115
Query: 509 INLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
L EN L L +L ++ L +N+L+ F LT+L L+L N++ S+
Sbjct: 116 --LVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SL 172
Query: 569 PKSM-EKLFYLRELNLSFNELEGEIPSGGIFANFTA 603
P+ + +KL L++L+L+ N+L+ +P G+F T+
Sbjct: 173 PEGVFDKLTQLKQLSLNDNQLKS-VPD-GVFDRLTS 206
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 71 SQLGNLSSLTILNLSHNKLSGSVPSSIYTMHT-LKFLDFTDNQLSGSVSSFVFNMSSIVD 129
S L L++LT L L+ N+L S+P+ ++ T LK L +NQL ++++
Sbjct: 79 SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTY 137
Query: 130 IRLTNNRLSGELPKNICNYLPHLKALFLDKNMFH 163
+ L +N+L LPK + + L +L L LD N
Sbjct: 138 LYLYHNQLQS-LPKGVFDKLTNLTRLDLDNNQLQ 170
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 76 LSSLTILNLSHNKLSGSVPSSIYTMHT-LKFLDFTDNQLSGSVSSFVFN-MSSIVDIRLT 133
L++LT L+L +N+L S+P ++ T LK L DNQL SV VF+ ++S+ I L
Sbjct: 156 LTNLTRLDLDNNQLQ-SLPEGVFDKLTQLKQLSLNDNQLK-SVPDGVFDRLTSLTHIWLL 213
Query: 134 NN 135
NN
Sbjct: 214 NN 215
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 76 LSSLTILNLSHNKLSGSVPSSIYTMHT-LKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTN 134
L++LT L L HN+L S+P ++ T L LD +NQL ++ + + L +
Sbjct: 132 LTNLTYLYLYHNQLQ-SLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLND 190
Query: 135 NRLSGELPKNICNYLPHLKALFL 157
N+L +P + + L L ++L
Sbjct: 191 NQLKS-VPDGVFDRLTSLTHIWL 212
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 706 IGRGGFGSVYGAR-LEDGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
IG+G F V AR + G ++A+++ Q +S+L+ E ++K + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 763 CSNDDFKALVLEYMSNGSLGDWL 785
+ LV+EY S G + D+L
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL 104
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 699 NFAENNIIGRGGFGSVYGA-----RLEDGMK-IAIKVFHQQCA-SALKSFEAECEVLKKI 751
N +G G FG V A + G +A+K+ + + S L+ +E VLK++
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
H ++IK+ +CS D L++EY GSL +L S
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR 121
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 699 NFAENNIIGRGGFGSVYGA-----RLEDGMK-IAIKVFHQQCA-SALKSFEAECEVLKKI 751
N +G G FG V A + G +A+K+ + + S L+ +E VLK++
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
H ++IK+ +CS D L++EY GSL +L S
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR 121
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 699 NFAENNIIGRGGFGSVYGA-----RLEDGMK-IAIKVFHQQCA-SALKSFEAECEVLKKI 751
N +G G FG V A + G +A+K+ + + S L+ +E VLK++
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
H ++IK+ +CS D L++EY GSL +L S
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR 121
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 338 RSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLT 397
++L L+ NPL S + + L+ L ++ C I A +LS+L TL+L N +
Sbjct: 55 KNLDLSFNPLRHLGSYSFFSFPE-LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113
Query: 398 GPISITFGRLQKLQGLYLASNNLVG--SFPDELCHIGRLAELALLDNR-HSGSIPSCVSN 454
F L LQ L NL +FP + H+ L EL + N S +P SN
Sbjct: 114 SLALGAFSGLSSLQKLVAVETNLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSN 171
Query: 455 LTSLRYLYLGSNR 467
LT+L +L L SN+
Sbjct: 172 LTNLEHLDLSSNK 184
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 474 STFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGD-MPATIGGLKDLQF 532
S F SL+++++ D S + L L + ++ N+ + +P L++L F
Sbjct: 439 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 498
Query: 533 MDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELE--- 589
+DL+ +LE P +F L+SL+VLN+S N + L L+ L+ S N +
Sbjct: 499 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 558
Query: 590 ----GEIPSGGIFANFTAESF 606
PS F N T F
Sbjct: 559 KQELQHFPSSLAFLNLTQNDF 579
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 513 ENNLSGDMPATIGGLKDLQFMDLAYNRLEG-PIPESFGDLTSLEVLNLSKNKI 564
E NL+ IG LK L+ +++A+N ++ +PE F +LT+LE L+LS NKI
Sbjct: 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 55 VTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLS 114
+T LD SQ L+ P+ +LSSL +LN+SHN +++L+ LD++ N +
Sbjct: 496 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 555
Query: 115 GSVSSFVFNM-SSIVDIRLTNNRLS 138
S + + SS+ + LT N +
Sbjct: 556 TSKKQELQHFPSSLAFLNLTQNDFA 580
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 337 LRSLKLAGNPL-DGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNK 395
L LK+AGN + FLP L ++L L ++ C + P A ++LS+L L + N
Sbjct: 471 LEVLKMAGNSFQENFLPDIFTEL-RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 529
Query: 396 LTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHI-GRLAELALLDN 442
+ + L LQ L + N+++ S EL H LA L L N
Sbjct: 530 FFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 577
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + ++ + +A+K+ L +E E++K I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 180
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 474 STFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGD-MPATIGGLKDLQF 532
S F SL+++++ D S + L L + ++ N+ + +P L++L F
Sbjct: 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474
Query: 533 MDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELE--- 589
+DL+ +LE P +F L+SL+VLN+S N + L L+ L+ S N +
Sbjct: 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 534
Query: 590 ----GEIPSGGIFANFTAESF 606
PS F N T F
Sbjct: 535 KQELQHFPSSLAFLNLTQNDF 555
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 338 RSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLT 397
++L L+ NPL S + + L+ L ++ C I A +LS+L TL+L N +
Sbjct: 31 KNLDLSFNPLRHLGSYSFFSFPE-LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89
Query: 398 GPISITFGRLQKLQGLYLASNNLVG--SFPDELCHIGRLAELALLDNR-HSGSIPSCVSN 454
F L LQ L NL +FP + H+ L EL + N S +P SN
Sbjct: 90 SLALGAFSGLSSLQKLVAVETNLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSN 147
Query: 455 LTSLRYLYLGSNR 467
LT+L +L L SN+
Sbjct: 148 LTNLEHLDLSSNK 160
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 513 ENNLSGDMPATIGGLKDLQFMDLAYNRLEG-PIPESFGDLTSLEVLNLSKNKISG 566
E NL+ IG LK L+ +++A+N ++ +PE F +LT+LE L+LS NKI
Sbjct: 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 55 VTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLS 114
+T LD SQ L+ P+ +LSSL +LN+SHN +++L+ LD++ N +
Sbjct: 472 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 531
Query: 115 GS 116
S
Sbjct: 532 TS 533
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 337 LRSLKLAGNPL-DGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNK 395
L LK+AGN + FLP L ++L L ++ C + P A ++LS+L L + N
Sbjct: 447 LEVLKMAGNSFQENFLPDIFTEL-RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 505
Query: 396 LTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHI-GRLAELALLDN 442
+ + L LQ L + N+++ S EL H LA L L N
Sbjct: 506 FFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 553
Score = 29.3 bits (64), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 7/181 (3%)
Query: 383 LSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSF-PDELCHIGRLAELALLD 441
L NL+ L + + F L L+ L +A N+ +F PD + L L L
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 442 NRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIG 501
+ P+ ++L+SL+ L + N F + + L + D+S N ++ + ++
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 539
Query: 502 NLKVLLG-INLSENNL--SGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLN 558
+ L +NL++N+ + + + + +KD + + + R+E P D + VL+
Sbjct: 540 HFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP---SDKQGMPVLS 596
Query: 559 L 559
L
Sbjct: 597 L 597
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 704 NIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALK---SFEAECEVLKKIRHRNLIKV 759
+ +G G FG V + E G K+A+K+ ++Q +L E + LK RH ++IK+
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 760 ISSCSNDDFKALVLEYMSNGSLGDWL 785
S +V+EY+S G L D++
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI 107
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 338 RSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLT 397
++L L+ NPL S + + L+ L ++ C I A +LS+L TL+L N +
Sbjct: 33 KNLDLSWNPLRHLGSYSFFSFPE-LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 91
Query: 398 GPISITFGRLQKLQGLYLASNNLVG--SFPDELCHIGRLAELALLDNR-HSGSIPSCVSN 454
F L LQ L NL +FP + H+ L EL + N S +P SN
Sbjct: 92 SLALGAFSGLSSLQKLVAVETNLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSN 149
Query: 455 LTSLRYLYLGSNR 467
LT+L +L L SN+
Sbjct: 150 LTNLEHLDLSSNK 162
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 513 ENNLSGDMPATIGGLKDLQFMDLAYNRLEG-PIPESFGDLTSLEVLNLSKNKI 564
E NL+ IG LK L+ +++A+N ++ +PE F +LT+LE L+LS NKI
Sbjct: 111 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 163
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + ++ + +A+K+ L +E E++K I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 121
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + ++ + +A+K+ L +E E++K I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 126
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 694 LQATDNFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASAL--KSFEAECEVLKK 750
Q+ + + ++G G +G V R +D G +AIK F + + K E ++LK+
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGD 783
+RH NL+ ++ C LV E++ + L D
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDD 113
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + ++ + +A+K+ L +E E++K I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 123
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 706 IGRGGFGSVYGAR-LEDGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
IG+G F V AR + G ++AIK+ Q ++L+ E ++K + H N++K+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 763 CSNDDFKALVLEYMSNGSLGDWL 785
+ L++EY S G + D+L
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYL 102
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 338 RSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLT 397
++L L+ NPL S + + L+ L ++ C I A +LS+L TL+L N +
Sbjct: 32 KNLDLSWNPLRHLGSYSFFSFPE-LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 90
Query: 398 GPISITFGRLQKLQGLYLASNNLVG--SFPDELCHIGRLAELALLDNR-HSGSIPSCVSN 454
F L LQ L NL +FP + H+ L EL + N S +P SN
Sbjct: 91 SLALGAFSGLSSLQKLVAVETNLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSN 148
Query: 455 LTSLRYLYLGSNR 467
LT+L +L L SN+
Sbjct: 149 LTNLEHLDLSSNK 161
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 513 ENNLSGDMPATIGGLKDLQFMDLAYNRLEG-PIPESFGDLTSLEVLNLSKNKI 564
E NL+ IG LK L+ +++A+N ++ +PE F +LT+LE L+LS NKI
Sbjct: 110 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 162
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 706 IGRGGFGSVYGAR-LEDGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
IG+G F V AR + G ++AIK+ Q ++L+ E ++K + H N++K+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 763 CSNDDFKALVLEYMSNGSLGDWL 785
+ L++EY S G + D+L
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYL 105
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 675 NDSILSSQATLRRFSYLEL-LQATDNFAEN----NIIGRGGFGSVYGARLEDGMKIAIKV 729
N S+LS+++ R+ S + LQ D E +IG+G FG VY R + I +
Sbjct: 5 NLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLID 64
Query: 730 FHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALV 772
+ LK+F+ E ++ RH N++ + +C + A++
Sbjct: 65 IERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 699 NFAENNIIGRGGFGSV-YGARLEDGMKIAIKVFHQQCASALK---SFEAECEVLKKIRHR 754
++ + +G G FG V G G K+A+K+ ++Q +L + E + LK RH
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 755 NLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
++IK+ S +V+EY+S G L D++
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYI 102
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 699 NFAENNIIGRGGFGSV-YGARLEDGMKIAIKVFHQQCASALK---SFEAECEVLKKIRHR 754
++ + +G G FG V G G K+A+K+ ++Q +L + E + LK RH
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 755 NLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
++IK+ S +V+EY+S G L D++
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYI 102
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 382 NLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLD 441
NL NL TL+L NK++ F L KL+ LYL+ N L P+++ L EL + +
Sbjct: 74 NLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL-KELPEKMPKT--LQELRVHE 130
Query: 442 NRHSGSIPSCVSNLTSLRYLYLGSN--RFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFD 499
N + S + L + + LG+N + + + F +K + + + + +
Sbjct: 131 NEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT---TIP 187
Query: 500 IGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNL 559
G L ++L N ++ A++ GL +L + L++N + S + L L+L
Sbjct: 188 QGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHL 247
Query: 560 SKNKISGSIPKSMEKLFYLRELNLSFNEL 588
+ NK+ +P + Y++ + L N +
Sbjct: 248 NNNKLV-KVPGGLADHKYIQVVYLHNNNI 275
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 502 NLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSK 561
+L+V+ +L + D+P D +DL N++ F +L +L L L
Sbjct: 32 HLRVVQCSDLGLEKVPKDLPP------DTALLDLQNNKITEIKDGDFKNLKNLHTLILIN 85
Query: 562 NKISGSIPKSMEKLFYLRELNLSFNELEGEIPS 594
NKIS P + L L L LS N+L+ E+P
Sbjct: 86 NKISKISPGAFAPLVKLERLYLSKNQLK-ELPE 117
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 382 NLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLD 441
NL NL TL+L NK++ F L KL+ LYL+ N L P+++ L EL + +
Sbjct: 74 NLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL-KELPEKMPKT--LQELRVHE 130
Query: 442 NRHSGSIPSCVSNLTSLRYLYLGSN--RFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFD 499
N + S + L + + LG+N + + + F +K + + + + +
Sbjct: 131 NEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT---TIP 187
Query: 500 IGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNL 559
G L ++L N ++ A++ GL +L + L++N + S + L L+L
Sbjct: 188 QGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHL 247
Query: 560 SKNKISGSIPKSMEKLFYLRELNLSFNEL 588
+ NK+ +P + Y++ + L N +
Sbjct: 248 NNNKLV-KVPGGLADHKYIQVVYLHNNNI 275
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 502 NLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSK 561
+L+V+ +L + D+P D +DL N++ F +L +L L L
Sbjct: 32 HLRVVQCSDLGLEKVPKDLPP------DTALLDLQNNKITEIKDGDFKNLKNLHTLILIN 85
Query: 562 NKISGSIPKSMEKLFYLRELNLSFNELEGEIPS 594
NKIS P + L L L LS N+L+ E+P
Sbjct: 86 NKISKISPGAFAPLVKLERLYLSKNQLK-ELPE 117
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 701 AENNIIGRGGFGSVYG-ARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKV 759
++ I+G G FG V+ G+K+A K+ + + + E V+ ++ H NLI++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 760 ISSCSNDDFKALVLEYMSNGSLGDWLHSSNY 790
+ + + LV+EY+ G L D + +Y
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESY 182
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 335 KKLRSLKLAGNPLDGFLPSSI--GNLSKSLETLVIANCSISGN-IPQAISNLSNLLTLVL 391
K+L++L L N L F ++ N+S SLETL ++ S++ + + + ++L L L
Sbjct: 377 KRLQTLILQRNGLKNFFKVALMTKNMS-SLETLDVSLNSLNSHAYDRTCAWAESILVLNL 435
Query: 392 ERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSC 451
N LTG + K+ L+ NN + S P ++ H+ L EL + N+ S+P
Sbjct: 436 SSNMLTGSVFRCLPPKVKVLDLH---NNRIMSIPKDVTHLQALQELNVASNQ-LKSVPDG 491
Query: 452 V-SNLTSLRYLYLGSNRFTFVIP 473
V LTSL+Y++L N + P
Sbjct: 492 VFDRLTSLQYIWLHDNPWDCTCP 514
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 508 GINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGS 567
++LS+N++S I L +L+ + L++NR+ F LE L++S N++
Sbjct: 56 ALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN- 114
Query: 568 IPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMG 608
S + LR L+LSFN+ + +P F N T +F+G
Sbjct: 115 --ISCCPMASLRHLDLSFNDFDV-LPVCKEFGNLTKLTFLG 152
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 502 NLKVLLGINLSENNL-SGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLS 560
N+ L +++S N+L S T + + ++L+ N L G + ++VL+L
Sbjct: 401 NMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLH 458
Query: 561 KNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFM---GNELLCGLPN 617
N+I SIPK + L L+ELN++ N+L+ +P G+F T+ ++ N C P
Sbjct: 459 NNRI-MSIPKDVTHLQALQELNVASNQLKS-VP-DGVFDRLTSLQYIWLHDNPWDCTCPG 515
Query: 618 LQ 619
++
Sbjct: 516 IR 517
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 7/138 (5%)
Query: 77 SSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSG--SVSSFVFNMSSIVDIRLTN 134
SS T LN + N + SV T+ L+ L N L V+ NMSS+ + ++
Sbjct: 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSL 412
Query: 135 NRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSAL-SKCKXXXXXXXXXXXXSGAIPKE 193
N L+ C + + L L NM G + L K K +IPK+
Sbjct: 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM----SIPKD 468
Query: 194 IGNLTMLKGISLLYNKLQ 211
+ +L L+ +++ N+L+
Sbjct: 469 VTHLQALQELNVASNQLK 486
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 477 WSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLA 536
W+ + IL + SSN L G++ + +L ++ NN +P + L+ LQ +++A
Sbjct: 426 WA-ESILVLNLSSNMLTGSVFRCLPPKVKVLDLH---NNRIMSIPKDVTHLQALQELNVA 481
Query: 537 YNRLEGPIPESFGDLTSLEVLNLSKNKISGSIP 569
N+L+ F LTSL+ + L N + P
Sbjct: 482 SNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 338 RSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLT 397
++L L+ NPL S + + L+ L ++ C I A +LS+L TL+L N +
Sbjct: 31 KNLDLSFNPLRHLGSYSFFSFPE-LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89
Query: 398 GPISITFGRLQKLQGLYLASNNLVG--SFPDELCHIGRLAELALLDNR-HSGSIPSCVSN 454
F L LQ L NL +FP + H+ L EL + N S +P SN
Sbjct: 90 SLALGAFSGLSSLQKLVAVETNLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSN 147
Query: 455 LTSLRYLYLGSNR 467
LT+L +L L SN+
Sbjct: 148 LTNLEHLDLSSNK 160
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 513 ENNLSGDMPATIGGLKDLQFMDLAYNRLEG-PIPESFGDLTSLEVLNLSKNKISG 566
E NL+ IG LK L+ +++A+N ++ +PE F +LT+LE L+LS NKI
Sbjct: 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 338 RSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLT 397
++L L+ NPL S + + L+ L ++ C I A +LS+L TL+L N +
Sbjct: 32 KNLDLSFNPLRHLGSYSFFSFPE-LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 90
Query: 398 GPISITFGRLQKLQGLYLASNNLVG--SFPDELCHIGRLAELALLDNR-HSGSIPSCVSN 454
F L LQ L NL +FP + H+ L EL + N S +P SN
Sbjct: 91 SLALGAFSGLSSLQKLVAVETNLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSN 148
Query: 455 LTSLRYLYLGSNR 467
LT+L +L L SN+
Sbjct: 149 LTNLEHLDLSSNK 161
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 513 ENNLSGDMPATIGGLKDLQFMDLAYNRLEG-PIPESFGDLTSLEVLNLSKNKI 564
E NL+ IG LK L+ +++A+N ++ +PE F +LT+LE L+LS NKI
Sbjct: 110 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 162
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V + + +A+K+ + S + F+ E + + K+ H L+K CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQ-EAQTMMKLSHPKLVKFYGVCSK 74
Query: 766 DDFKALVLEYMSNGSLGDWLHS 787
+ +V EY+SNG L ++L S
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRS 96
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 16/93 (17%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQ-QCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
IG+G +G V+ + G K+A+KVF + AS + E VL +RH N++ I++
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVL--MRHENILGFIAA-- 99
Query: 765 NDDFKA--------LVLEYMSNGSLGDWLHSSN 789
D K L+ +Y NGSL D+L S+
Sbjct: 100 --DIKGTGSWTQLYLITDYHENGSLYDYLKSTT 130
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 686 RRFSYLELLQATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAEC 745
R SY ++A++ I G G FG+VY + + + I ++F E
Sbjct: 25 RDSSYYWEIEASEVMLSTRI-GSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEV 83
Query: 746 EVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLH 786
VL+K RH N++ + + D+ A+V ++ SL LH
Sbjct: 84 AVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLH 123
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 333 NCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLE 392
N K+ L+L+GNPL S+I L +S++TL + + I+ P ++ LSNL L L+
Sbjct: 89 NLTKITELELSGNPLKNV--SAIAGL-QSIKTLDLTSTQITDVTP--LAGLSNLQVLYLD 143
Query: 393 RNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCV 452
N++T IS G L LQ L + +N + P L ++ +L L DN+ S P +
Sbjct: 144 LNQITN-ISPLAG-LTNLQYLSIGNNQVNDLTP--LANLSKLTTLRADDNKISDISP--L 197
Query: 453 SNLTSLRYLYLGSNRFTFVIP 473
++L +L ++L N+ + V P
Sbjct: 198 ASLPNLIEVHLKDNQISDVSP 218
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 706 IGRGGFGSVYGAR-LEDGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
IG+G F V AR + G ++A+K+ Q +S+L+ E + K + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 763 CSNDDFKALVLEYMSNGSLGDWL 785
+ LV EY S G + D+L
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYL 104
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 689 SYLELLQATDNFAENNIIGRGGFGSV-YGARLEDGMKIAIKVFHQQC-ASALKSFEAECE 746
Y ELL+ + + IG GGF V + G +AIK+ + S L + E E
Sbjct: 4 DYDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIE 60
Query: 747 VLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
LK +RH+++ ++ + +VLEY G L D++ S +
Sbjct: 61 ALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQD 103
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 699 NFAE---NNIIGRGGFGSVYGARLEDGMKIAIKVFH----QQCASALKSFEAECEVLKKI 751
+FAE IIG GGFG VY A G ++A+K + + +++ E ++ +
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
+H N+I + C + LV+E+ G L
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPL 93
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 147
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 187
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 146
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 694 LQATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIR 752
L+ +F E ++G+G FG V AR D AIK + L + +E +L +
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLN 60
Query: 753 H-------------RNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
H RN +K +++ + +EY NG+L D +HS N
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN 110
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 133
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + K+A+K+ L +E E++K I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 168
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 127
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 338 RSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLT 397
++L L+ NPL S + + L+ L ++ C I A +LS+L TL+L N +
Sbjct: 33 KNLDLSFNPLRHLGSYSFFSFPE-LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 91
Query: 398 GPISITFGRLQKLQGLYLASNNLVG--SFPDELCHIGRLAELALLDNR-HSGSIPSCVSN 454
F L LQ L NL +FP + H+ L EL + N S +P SN
Sbjct: 92 SLALGAFSGLSSLQKLVALETNLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSN 149
Query: 455 LTSLRYLYLGSNR 467
LT+L +L L SN+
Sbjct: 150 LTNLEHLDLSSNK 162
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 513 ENNLSGDMPATIGGLKDLQFMDLAYNRLEG-PIPESFGDLTSLEVLNLSKNKI 564
E NL+ IG LK L+ +++A+N ++ +PE F +LT+LE L+LS NKI
Sbjct: 111 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 163
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + ++ + +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++ Y S G+L ++L +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRA 134
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 129
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 128
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 120
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 126
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 128
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 129
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 125
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 126
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 128
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 127
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 123
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 681 SQATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFH-QQCA 735
S T+ F+ + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 19 STQTVHEFA--KELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 75
Query: 736 SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
+ F E ++ + H N+I++ + +V EYM NGSL +L +
Sbjct: 76 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 129
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 706 IGRGGFGSV----YGARLED-GMKIAIKVFHQQCASALKS-FEAECEVLKKIRHRNLIKV 759
+G G FG V Y + G +A+K C +S ++ E ++L+ + H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 760 ISSCSNDDFKAL--VLEYMSNGSLGDWL 785
C + K+L V+EY+ GSL D+L
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL 109
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 698 DNFAENNIIGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVL 748
D +G G FG V A + K+A+K+ L +E E++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 749 KKI-RHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
K I +H+N+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 681 SQATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFH-QQCA 735
S T+ F+ + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 2 STQTVHEFA--KELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 58
Query: 736 SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
+ F E ++ + H N+I++ + +V EYM NGSL +L +
Sbjct: 59 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 112
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 703 NNIIGRGGFGSVYGARL--EDGMKI--AIKVFHQQC-ASALKSFEAECEVLKKIRHRNLI 757
N +IGRG FG VY L DG KI A+K ++ + F E ++K H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 758 KVISSCSNDDFKAL-VLEYMSNGSLGDWLHSSNY 790
++ C + L VL YM +G L +++ + +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 128
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 706 IGRGGFGSV----YGARLED-GMKIAIKVFHQQCASALKS-FEAECEVLKKIRHRNLIKV 759
+G G FG V Y + G +A+K C +S ++ E ++L+ + H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 760 ISSCSNDDFKAL--VLEYMSNGSLGDWL 785
C + K+L V+EY+ GSL D+L
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL 109
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 689 SYLELLQATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFH-QQCASALKSFEA 743
+ + L AT N + + ++G G FG V RL+ + +AIK + F
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 744 ECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
E ++ + H N+I++ + +V EYM NGSL +L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 689 SYLELLQATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFH-QQCASALKSFEA 743
+ + L AT N + + ++G G FG V RL+ + +AIK + F
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 744 ECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
E ++ + H N+I++ + +V EYM NGSL +L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 333 NCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLE 392
N K+ L+L+GNPL S+I L +S++TL + + I+ P ++ LSNL L L+
Sbjct: 83 NLTKITELELSGNPLKNV--SAIAGL-QSIKTLDLTSTQITDVTP--LAGLSNLQVLYLD 137
Query: 393 RNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCV 452
N++T IS G L LQ YL+ N S L ++ +L L DN+ S P +
Sbjct: 138 LNQITN-ISPLAG-LTNLQ--YLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--L 191
Query: 453 SNLTSLRYLYLGSNRFTFVIP 473
++L +L ++L +N+ + V P
Sbjct: 192 ASLPNLIEVHLKNNQISDVSP 212
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 689 SYLELLQATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFH-QQCASALKSFEA 743
+ + L AT N + + ++G G FG V RL+ + +AIK + F
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 744 ECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
E ++ + H N+I++ + +V EYM NGSL +L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 689 SYLELLQATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFH-QQCASALKSFEA 743
+ + L AT N + + ++G G FG V RL+ + +AIK + F
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 744 ECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
E ++ + H N+I++ + +V EYM NGSL +L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 689 SYLELLQATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFH-QQCASALKSFEA 743
+ + L AT N + + ++G G FG V RL+ + +AIK + F
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 744 ECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
E ++ + H N+I++ + +V EYM NGSL +L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Query: 694 LQATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFH-QQCASALKSFEAECEVL 748
L AT N + + ++G G FG V RL+ + +AIK + F E ++
Sbjct: 40 LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 749 KKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
+ H N+I++ + +V EYM NGSL +L +
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 139
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 689 SYLELLQATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFH-QQCASALKSFEA 743
+ + L AT N + + ++G G FG V RL+ + +AIK + F
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 744 ECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
E ++ + H N+I++ + +V EYM NGSL +L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + ++ + +A+K+ L +E E++K I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++ Y S G+L ++L +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRA 134
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 689 SYLELLQATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFH-QQCASALKSFEA 743
+ + L AT N + + ++G G FG V RL+ + +AIK + F
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 744 ECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
E ++ + H N+I++ + +V EYM NGSL +L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 698 DNFAENNIIGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVL 748
D +G G FG V A + K+A+K+ L +E E++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 749 KKI-RHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
K I +H+N+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 697 TDNFAENNIIGRGGFGSVYG--ARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKI--- 751
T F E IG G FGSV+ RL DG AIK + A ++ A EV
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 64
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSNY 790
+H ++++ S+ + DD + EY + GSL D + S NY
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENY 102
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 698 DNFAENNIIGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVL 748
D +G G FG V A + K+A+K+ L +E E++
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 749 KKI-RHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
K I +H+N+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 120
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 698 DNFAENNIIGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVL 748
D +G G FG V A + K+A+K+ L +E E++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 749 KKI-RHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
K I +H+N+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 698 DNFAENNIIGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVL 748
D +G G FG V A + K+A+K+ L +E E++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 749 KKI-RHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
K I +H+N+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 697 TDNFAENNIIGRGGFGSVYGA--RLEDGMKIAIKVFHQQCASALKSFEAECEVLKKI--- 751
T F E IG G FGSV+ RL DG AIK + A ++ A EV
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 68
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSNY 790
+H ++++ S+ + DD + EY + GSL D + S NY
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENY 106
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + K+A+K+ L +E E++K I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 116
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 698 DNFAENNIIGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVL 748
D +G G FG V A + K+A+K+ L +E E++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 749 KKI-RHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
K I +H+N+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 112
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 697 TDNFAENNIIGRGGFGSVYGA--RLEDGMKIAIKVFHQQCASALKSFEAECEVLKKI--- 751
T F E IG G FGSV+ RL DG AIK + A ++ A EV
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 66
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSNY 790
+H ++++ S+ + DD + EY + GSL D + S NY
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENY 104
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 33/174 (18%)
Query: 443 RHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGN 502
RH+ S+P+ + T+ + LYL N+ T + P F SL N
Sbjct: 30 RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLI---------------------N 65
Query: 503 LKVLLGINLSENNLSGDMPATI-GGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSK 561
LK L L N L G +P + L L +DL N+L F L L+ L +
Sbjct: 66 LKELY---LGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCC 121
Query: 562 NKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGI--FANFTAESFMGNELLC 613
NK++ +P+ +E+L +L L L N+L+ IP G ++ T GN C
Sbjct: 122 NKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHGAFDRLSSLTHAYLFGNPWDC 173
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 437 LALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTL 496
L L DN+ + P +L +L+ LYLGSN+ + F SL + D +N L
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLP 104
Query: 497 SFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSL 554
S L L + + N L+ ++P I L L + L N+L+ +F L+SL
Sbjct: 105 SAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSL 161
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 70 PSQLGNLSSLTILNLSHNKLSGSVPSSIY-TMHTLKFLDFTDNQLSGSVSSFVFNMSSIV 128
P +L +L L L N+L G++P ++ ++ L LD NQL+ S+ + +
Sbjct: 57 PGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLK 115
Query: 129 DIRLTNNRLSGELPKNICNYLPHLKALFLDKNMF 162
++ + N+L+ ELP+ I L HL L LD+N
Sbjct: 116 ELFMCCNKLT-ELPRGI-ERLTHLTHLALDQNQL 147
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 697 TDNFAENNIIGRGGFGSVYGA--RLEDGMKIAIKVFHQQCASALKSFEAECEVLKKI--- 751
T F E IG G FGSV+ RL DG AIK + A ++ A EV
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 66
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSNY 790
+H ++++ S+ + DD + EY + GSL D + S NY
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENY 104
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 703 NNIIGRGGFGSVYGARLEDGMKI--AIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
N IGRG +G V A ++ G +I A K + + F+ E E++K + H N+I++
Sbjct: 14 ENTIGRGSWGEVKIA-VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 72
Query: 761 SSCSNDDFKALVLEYMSNGSL 781
+ ++ LV+E + G L
Sbjct: 73 ETFEDNTDIYLVMELCTGGEL 93
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 706 IGRGGFGSVYGA--------RLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKI-RHRN 755
+G G FG V A + K+A+K+ L +E E++K I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+I ++ +C+ D +++EY S G+L ++L +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 119
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 697 TDNFAENNIIGRGGFGSVYG-ARLEDGMKIAIKVFHQQCASA--LKSFEAECEVLKKIRH 753
+DN+ +G+G F V G++ A K+ + + SA + E E + +K++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
N++++ S + F LV + ++ G L
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGEL 115
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 703 NNIIGRGGFGSVYGARLEDGMKI--AIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVI 760
N IGRG +G V A ++ G +I A K + + F+ E E++K + H N+I++
Sbjct: 31 ENTIGRGSWGEVKIA-VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 89
Query: 761 SSCSNDDFKALVLEYMSNGSL 781
+ ++ LV+E + G L
Sbjct: 90 ETFEDNTDIYLVMELCTGGEL 110
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 76 LSSLTILNLSHNKLSGSVPSSIYTMHT-LKFLDFTDNQLSGSVSSFVFN-MSSIVDIRLT 133
L+SLT LNLS N+L S+P+ ++ T LK L NQL S+ VF+ ++ + D+RL
Sbjct: 75 LTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLY 132
Query: 134 NNRLSGELPKNICNYLPHLKALFLDKNMFHGKIP 167
N+L +P + + L L+ ++L N + P
Sbjct: 133 QNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 447 SIPSCV-SNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKV 505
S+P+ V LTSL LYLG N+ + F L + + + S+N L + L
Sbjct: 42 SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQ 101
Query: 506 LLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPES-FGDLTSLEVLNLSKNKI 564
L + L+ N L L L+ + L N+L+ +P+ F LTSL+ + L N
Sbjct: 102 LKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDNPW 160
Query: 565 SGSIP 569
+ P
Sbjct: 161 DCTCP 165
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 509 INLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
++L N+L L L + L N+L+ F LTSL LNLS N++ S+
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ-SL 91
Query: 569 PKSM-EKLFYLRELNLSFNELEGEIPSGGIFANFT 602
P + +KL L+EL L+ N+L+ +P G+F T
Sbjct: 92 PNGVFDKLTQLKELALNTNQLQ-SLPD-GVFDKLT 124
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 484 FFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGP 543
+ D +N L + L L + L N L L L +++L+ N+L+
Sbjct: 32 YLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSL 91
Query: 544 IPESFGDLTSLEVLNLSKNKISGSIPKSM-EKLFYLRELNLSFNELEGEIPSGGIFANFT 602
F LT L+ L L+ N++ S+P + +KL L++L L N+L+ +P G+F T
Sbjct: 92 PNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLK-SVPD-GVFDRLT 148
Query: 603 AESFM---GNELLCGLPNLQ 619
+ ++ N C P ++
Sbjct: 149 SLQYIWLHDNPWDCTCPGIR 168
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 54 RVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYT-MHTLKFLDFTDNQ 112
+ T LD +L+ L+SLT L L NKL S+P+ ++ + +L +L+ + NQ
Sbjct: 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQ 87
Query: 113 LSGSVSSFVFN-MSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMF 162
L S+ + VF+ ++ + ++ L N+L LP + + L LK L L +N
Sbjct: 88 LQ-SLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQL 136
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 372 ISGNIPQAISN-----LSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPD 426
+ GN Q++ N L++L L L N+L + F +L +L+ L L +N L S PD
Sbjct: 59 LGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPD 117
Query: 427 ELC-HIGRLAELALLDNRHSGSIPSCV-SNLTSLRYLYLGSNRFTFVIP 473
+ + +L +L L N+ S+P V LTSL+Y++L N + P
Sbjct: 118 GVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 697 TDNFAENNIIGRGGFGSVYG-ARLEDGMKIAIKVFHQQCASA--LKSFEAECEVLKKIRH 753
+DN+ +G+G F V G++ A K+ + + SA + E E + +K++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
N++++ S + F LV + ++ G L
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL 92
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 706 IGRGGFGSVYGARLED-----GMKIAIKVFHQQCA-SALKSFEAECEVLKKIRHRNLIKV 759
+G G FG V R + G ++A+K + + + + E E+L+ + H N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 760 ISSCSNDDFKA--LVLEYMSNGSLGDWL 785
C+ D L++E++ +GSL ++L
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL 104
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 706 IGRGGFGSVYGARLED-----GMKIAIKVFHQQCA-SALKSFEAECEVLKKIRHRNLIKV 759
+G G FG V R + G ++A+K + + + + E E+L+ + H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 760 ISSCSNDDFKA--LVLEYMSNGSLGDWL 785
C+ D L++E++ +GSL ++L
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL 116
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 697 TDNFAENNIIGRGGFGSVYG-ARLEDGMKIAIKVFHQQCASA--LKSFEAECEVLKKIRH 753
+DN+ +G+G F V G++ A K+ + + SA + E E + +K++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
N++++ S + F LV + ++ G L
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL 92
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 38.9 bits (89), Expect = 0.012, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V + +AIK+ + S F E +V+ + H L+++ C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 766 DDFKALVLEYMSNGSLGDWL 785
++ EYM+NG L ++L
Sbjct: 71 QRPIFIITEYMANGCLLNYL 90
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 69 IPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLS 114
+P+++ NLS+L +L+LSHN+L+ S+P+ + + LK+ F DN ++
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT 306
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 489 SNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESF 548
SN + +S +I L + L+ N+L+ ++PA I L +L+ +DL++NRL +P
Sbjct: 232 SNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAEL 289
Query: 549 GDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEI 592
G L+ N ++ ++P L L+ L + N LE +
Sbjct: 290 GSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQF 332
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 447 SIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVL 506
+P+ + NL++LR L L NR T +P+ S + +F F N +V TL ++ GNL L
Sbjct: 261 ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDN-MVTTLPWEFGNLCNL 318
Query: 507 LGINLSENNLSGDM-----PATIGGLKDLQFMDLAYNRLEGPIPES 547
+ + N L ++ GL L NR E P+P
Sbjct: 319 QFLGVEGNPLEKQFLKILTEKSVTGL----IFYLRDNRPEIPLPHE 360
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 697 TDNFAENNIIGRGGFGSVYG-ARLEDGMKIAIKVFHQQCASA--LKSFEAECEVLKKIRH 753
+DN+ +G+G F V G++ A K+ + + SA + E E + +K++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
N++++ S + F LV + ++ G L
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGEL 91
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 703 NNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFEA---ECEVLKKIRHRNLIK 758
++I+G+G +V+ R + G AIKVF+ S L+ + E EVLKK+ H+N++K
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNN--ISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 759 V--ISSCSNDDFKALVLEYMSNGSL 781
+ I + K L++E+ GSL
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSL 96
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 704 NIIGRGGFGSVYGARLEDG--------MKIAIKVFHQQCASALKSFEAECEVLKKIRHRN 755
++G+GG+G V+ R G MK+ K + A +AE +L++++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSL 781
++ +I + L+LEY+S G L
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGEL 108
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 704 NIIGRGGFGSVYGARLEDG--------MKIAIKVFHQQCASALKSFEAECEVLKKIRHRN 755
++G+GG+G V+ R G MK+ K + A +AE +L++++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSL 781
++ +I + L+LEY+S G L
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGEL 108
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG+VY + + + + L++F+ E VL+K RH N++ + +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
A+V ++ SL LH+S
Sbjct: 80 PQL-AIVTQWCEGSSLYHHLHASE 102
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 702 ENNIIGRGGFGSVYGARLE--DGMK---IAIKVFHQQCASALK-SFEAECEVLKKIRHRN 755
+IG G FG VY L+ G K +AIK + F E ++ + H N
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
+I++ S ++ EYM NG+L +L +
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKD 141
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V + +AIK+ + S F E +V+ + H L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 766 DDFKALVLEYMSNGSLGDWLHS 787
++ EYM+NG L ++L
Sbjct: 91 QRPIFIITEYMANGCLLNYLRE 112
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V + +AIK+ + S F E +V+ + H L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 766 DDFKALVLEYMSNGSLGDWLHSSNY 790
++ EYM+NG L ++L +
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRH 115
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG+VY + + + + L++F+ E VL+K RH N++ + +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
A+V ++ SL LH+S
Sbjct: 92 PQL-AIVTQWCEGSSLYHHLHASE 114
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEV 100
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR ++ I A+KV + + A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTV 95
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V + +AIK+ + S F E +V+ + H L+++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 766 DDFKALVLEYMSNGSLGDWLHS 787
++ EYM+NG L ++L
Sbjct: 76 QRPIFIITEYMANGCLLNYLRE 97
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEV 100
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 703 NNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFEA---ECEVLKKIRHRNLIK 758
++I+G+G +V+ R + G AIKVF+ S L+ + E EVLKK+ H+N++K
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNN--ISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 759 V--ISSCSNDDFKALVLEYMSNGSL 781
+ I + K L++E+ GSL
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSL 96
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V + +AIK+ + S F E +V+ + H L+++ C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 766 DDFKALVLEYMSNGSLGDWLHS 787
++ EYM+NG L ++L
Sbjct: 82 QRPIFIITEYMANGCLLNYLRE 103
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V + +AIK+ + S F E +V+ + H L+++ C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 766 DDFKALVLEYMSNGSLGDWLHSSNY 790
++ EYM+NG L ++L +
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRH 99
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
+G G FG V + +AIK+ + S F E +V+ + H L+++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 766 DDFKALVLEYMSNGSLGDWLHSSNY 790
++ EYM+NG L ++L +
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRH 100
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 82/211 (38%), Gaps = 55/211 (26%)
Query: 377 PQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAE 436
P N+ L LVLERN L+ F KL L +++NNL R+ +
Sbjct: 110 PHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNL-----------ERIED 158
Query: 437 LALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFV----IPSTFWSLKDILFFDFSSNFL 492
TSL+ L L SNR T V IPS F + + S N L
Sbjct: 159 -------------DTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHA-------NVSYN-L 197
Query: 493 VGTLSFDI----------------GNLKVLLGI-NLSENNLSGDMPATIGGLKDLQFMDL 535
+ TL+ I G + V L I L NNL+ A + L +DL
Sbjct: 198 LSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDL 255
Query: 536 AYNRLEGPIPESFGDLTSLEVLNLSKNKISG 566
+YN LE + F + LE L +S N++
Sbjct: 256 SYNELEKIMYHPFVKMQRLERLYISNNRLVA 286
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 509 INLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
++L L+ AT GL L +++L YN+L+ F DLT L L L+ N+++ S+
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SL 98
Query: 569 PKSM-EKLFYLRELNLSFNELEGEIPSGGIFANFT 602
P + + L L +L L N+L+ +PS G+F T
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLK-SLPS-GVFDRLT 131
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 9/171 (5%)
Query: 447 SIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDI-GNLKV 505
S+PS + T L L S + +TF L + + + N L TLS + +L
Sbjct: 28 SVPSGIPADT--EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTE 84
Query: 506 LLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKIS 565
L + L+ N L+ L L + L N+L+ F LT L+ L L+ N++
Sbjct: 85 LGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ 144
Query: 566 GSIPK-SMEKLFYLRELNLSFNELEGEIPSGGI--FANFTAESFMGNELLC 613
SIP + +KL L+ L+LS N+L+ +P G + GN+ C
Sbjct: 145 -SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFDC 193
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 59 DTSQFNLQGTIPSQLGN-----LSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQL 113
DT + +LQ T + L + L+ LT LNL +N+L + L L +NQL
Sbjct: 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL 95
Query: 114 SGSVSSFVFNMSSIVD-IRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSK 172
+ S+ VF+ + +D + L N+L LP + + L LK L L+ N A K
Sbjct: 96 A-SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDK 153
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 73/183 (39%), Gaps = 34/183 (18%)
Query: 403 TFGRLQKLQGLYLASNNL----VGSFPDELCHIGRLAELALLDNRHSGSIPSCV-SNLTS 457
TF L KL L L N L G F D+L +G L L N S+P V +LT
Sbjct: 54 TFRGLTKLTWLNLDYNQLQTLSAGVF-DDLTELGTLG----LANNQLASLPLGVFDHLTQ 108
Query: 458 LRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLS 517
L LYLG N+ +PS FD L L + L+ N L
Sbjct: 109 LDKLYLGGNQLK-SLPSG--------VFD---------------RLTKLKELRLNTNQLQ 144
Query: 518 GDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFY 577
L +LQ + L+ N+L+ +F L L+ + L N+ S +++ +
Sbjct: 145 SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCETLYLSQW 204
Query: 578 LRE 580
+RE
Sbjct: 205 IRE 207
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 383 LSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDN 442
L+ L L L+ N+L + F L +L L LA NN + S P +G L LD
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA-NNQLASLP-----LGVFDHLTQLDK 111
Query: 443 RHSG-----SIPSCV-SNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFL 492
+ G S+PS V LT L+ L L +N+ + F L ++ S+N L
Sbjct: 112 LYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 379 AISNLSNLLTLVLERNKLTG-PISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAEL 437
+L+ L TL L N+L P+ + F L +L LYL N L + +L EL
Sbjct: 78 VFDDLTELGTLGLANNQLASLPLGV-FDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKEL 136
Query: 438 ALLDNRHSGSIPS-CVSNLTSLRYLYLGSNRFTFVIPSTF 476
L N+ SIP+ LT+L+ L L +N+ V F
Sbjct: 137 RLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAF 175
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV 98
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV 98
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTV 94
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 80/208 (38%), Gaps = 53/208 (25%)
Query: 377 PQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAE 436
P N+ L LVLERN L+ F KL L +++NNL R+ +
Sbjct: 116 PHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNL-----------ERIED 164
Query: 437 LALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFV----IPSTFWSLKDILFFDFSSNFL 492
TSL+ L L SNR T V IPS F + + S N L
Sbjct: 165 -------------DTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHA-------NVSYNLL 204
Query: 493 --------VGTLSFDIGNLKVLLG--------INLSENNLSGDMPATIGGLKDLQFMDLA 536
V L ++ V+ G + L NNL+ A + L +DL+
Sbjct: 205 STLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLS 262
Query: 537 YNRLEGPIPESFGDLTSLEVLNLSKNKI 564
YN LE + F + LE L +S N++
Sbjct: 263 YNELEKIMYHPFVKMQRLERLYISNNRL 290
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV 95
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTV 99
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 509 INLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
++L L+ AT GL L +++L YN+L+ F DLT L L L+ N+++ S+
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SL 98
Query: 569 PKSM-EKLFYLRELNLSFNELEGEIPSGGIFANFT 602
P + + L L +L L N+L+ +PS G+F T
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLK-SLPS-GVFDRLT 131
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 9/171 (5%)
Query: 447 SIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDI-GNLKV 505
S+PS + T L L S + +TF L + + + N L TLS + +L
Sbjct: 28 SVPSGIPADT--EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTE 84
Query: 506 LLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKIS 565
L + L+ N L+ L L + L N+L+ F LT L+ L L+ N++
Sbjct: 85 LGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ 144
Query: 566 GSIPK-SMEKLFYLRELNLSFNELEGEIPSGGI--FANFTAESFMGNELLC 613
SIP + +KL L+ L+LS N+L+ +P G + GN+ C
Sbjct: 145 -SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFDC 193
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 59 DTSQFNLQGTIPSQLGN-----LSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQL 113
DT + +LQ T + L + L+ LT LNL +N+L + L L +NQL
Sbjct: 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL 95
Query: 114 SGSVSSFVFNMSSIVD-IRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSK 172
+ S+ VF+ + +D + L N+L LP + + L LK L L+ N A K
Sbjct: 96 A-SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDK 153
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 65/164 (39%), Gaps = 19/164 (11%)
Query: 403 TFGRLQKLQGLYLASNNL----VGSFPDELCHIGRLAELALLDNRHSGSIPSCV-SNLTS 457
TF L KL L L N L G F D+L +G L L N S+P V +LT
Sbjct: 54 TFRGLTKLTWLNLDYNQLQTLSAGVF-DDLTELGTLG----LANNQLASLPLGVFDHLTQ 108
Query: 458 LRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLS 517
L LYLG N+ + F L + ++N L + L L ++LS N L
Sbjct: 109 LDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168
Query: 518 GDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSK 561
L LQ + L N+ D + E+L LS+
Sbjct: 169 SVPHGAFDRLGKLQTITLFGNQF---------DCSRCEILYLSQ 203
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 383 LSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDN 442
L+ L L L+ N+L + F L +L L LA NN + S P +G L LD
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA-NNQLASLP-----LGVFDHLTQLDK 111
Query: 443 RHSG-----SIPSCV-SNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFL 492
+ G S+PS V LT L+ L L +N+ + F L ++ S+N L
Sbjct: 112 LYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 379 AISNLSNLLTLVLERNKLTG-PISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAEL 437
+L+ L TL L N+L P+ + F L +L LYL N L + +L EL
Sbjct: 78 VFDDLTELGTLGLANNQLASLPLGV-FDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKEL 136
Query: 438 ALLDNRHSGSIPS-CVSNLTSLRYLYLGSNRFTFVIPSTF 476
L N+ SIP+ LT+L+ L L +N+ V F
Sbjct: 137 RLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAF 175
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV 95
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 29/280 (10%)
Query: 338 RSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLT 397
+++ L+ NPL S N S+ L+ L ++ C I +A L +L L+L N +
Sbjct: 30 KNIDLSFNPLKILKSYSFSNFSE-LQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQ 88
Query: 398 GPISITFGRLQKLQGLYLASNNLVG--SFPDELCHIGRLAELALLDNR----HSGSIPSC 451
+F L L+ L L SFP IG+L L L+ HS +P+
Sbjct: 89 SFSPGSFSGLTSLENLVAVETKLASLESFP-----IGQLITLKKLNVAHNFIHSCKLPAY 143
Query: 452 VSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINL 511
SNLT+L ++ L N + + L++ + S + + + F I + + GI L
Sbjct: 144 FSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDF-IQD-QAFQGIKL 201
Query: 512 SENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKS 571
E L G+ ++ + +LA + I F D +LE+ P
Sbjct: 202 HELTLRGNFNSS--NIMKTCLQNLAGLHVHRLILGEFKDERNLEIFE----------PSI 249
Query: 572 MEKL--FYLRELNLSF-NELEGEIPSGGIFANFTAESFMG 608
ME L + E L++ N+ +I AN +A S G
Sbjct: 250 MEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAG 289
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 35/199 (17%)
Query: 434 LAELALLD-NRHSGSIPSCVS----NLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFS 488
L L+ LD +R++ S C S SLR+L L N ++ + F L+++ DF
Sbjct: 344 LPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNG-AIIMSANFMGLEELQHLDFQ 402
Query: 489 SNFLVGTLSFD-IGNLKVLLGINLSENNLSGDMPATIGGL-------------KD----- 529
+ L F +L+ LL +++S N D GL KD
Sbjct: 403 HSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSN 462
Query: 530 -------LQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELN 582
L F+DL+ +LE F L L++LN+S N + +L+ L L+
Sbjct: 463 VFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLD 522
Query: 583 LSFNELEGEIPSGGIFANF 601
SFN +E S GI +F
Sbjct: 523 CSFNRIET---SKGILQHF 538
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 121/312 (38%), Gaps = 69/312 (22%)
Query: 337 LRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSI------------------------ 372
L +L L GNP+ F P S L+ SLE LV +
Sbjct: 77 LSNLILTGNPIQSFSPGSFSGLT-SLENLVAVETKLASLESFPIGQLITLKKLNVAHNFI 135
Query: 373 -SGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQ-----GLYL-ASNNLVGSFP 425
S +P SNL+NL+ + L N + +IT LQ L+ L L S N +
Sbjct: 136 HSCKLPAYFSNLTNLVHVDLSYNYIQ---TITVNDLQFLRENPQVNLSLDMSLNPIDFIQ 192
Query: 426 DELCHIGRLAELALLDNRHSGSI-PSCVSNLTSLRY--LYLGSNR----FTFVIPSTFWS 478
D+ +L EL L N +S +I +C+ NL L L LG + PS
Sbjct: 193 DQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEG 252
Query: 479 LKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSG-------DMPATIG------ 525
L D+ +F + S DI L N+S +L+G D+P
Sbjct: 253 LCDVTIDEFRLTY-TNDFSDDIVKFHCL--ANVSAMSLAGVSIKYLEDVPKHFKWQSLSI 309
Query: 526 ---GLKDLQFMDLAYNRL------EGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLF 576
LK +DL + + +G I L SL L+LS+N +S S S L
Sbjct: 310 IRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLG 369
Query: 577 Y--LRELNLSFN 586
LR L+LSFN
Sbjct: 370 TNSLRHLDLSFN 381
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 9/132 (6%)
Query: 472 IPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQ 531
IPS S K+I D S N L S+ N L ++LS + GL L
Sbjct: 25 IPS---STKNI---DLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 78
Query: 532 FMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEG- 590
+ L N ++ P SF LTSLE L + K++ + +L L++LN++ N +
Sbjct: 79 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSC 138
Query: 591 EIPSGGIFANFT 602
++P F+N T
Sbjct: 139 KLP--AYFSNLT 148
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV 98
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 29/280 (10%)
Query: 338 RSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLT 397
+++ L+ NPL S N S+ L+ L ++ C I +A L +L L+L N +
Sbjct: 35 KNIDLSFNPLKILKSYSFSNFSE-LQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQ 93
Query: 398 GPISITFGRLQKLQGLYLASNNLVG--SFPDELCHIGRLAELALLDNR----HSGSIPSC 451
+F L L+ L L SFP IG+L L L+ HS +P+
Sbjct: 94 SFSPGSFSGLTSLENLVAVETKLASLESFP-----IGQLITLKKLNVAHNFIHSCKLPAY 148
Query: 452 VSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGINL 511
SNLT+L ++ L N + + L++ + S + + + F I + + GI L
Sbjct: 149 FSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDF-IQD-QAFQGIKL 206
Query: 512 SENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKS 571
E L G+ ++ + +LA + I F D +LE+ P
Sbjct: 207 HELTLRGNFNSS--NIMKTCLQNLAGLHVHRLILGEFKDERNLEIFE----------PSI 254
Query: 572 MEKL--FYLRELNLSF-NELEGEIPSGGIFANFTAESFMG 608
ME L + E L++ N+ +I AN +A S G
Sbjct: 255 MEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAG 294
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 35/199 (17%)
Query: 434 LAELALLD-NRHSGSIPSCVS----NLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFS 488
L L+ LD +R++ S C S SLR+L L N ++ + F L+++ DF
Sbjct: 349 LPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNG-AIIMSANFMGLEELQHLDFQ 407
Query: 489 SNFLVGTLSFD-IGNLKVLLGINLSENNLSGDMPATIGGL-------------KD----- 529
+ L F +L+ LL +++S N D GL KD
Sbjct: 408 HSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSN 467
Query: 530 -------LQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELN 582
L F+DL+ +LE F L L++LN+S N + +L+ L L+
Sbjct: 468 VFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLD 527
Query: 583 LSFNELEGEIPSGGIFANF 601
SFN +E S GI +F
Sbjct: 528 CSFNRIET---SKGILQHF 543
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 121/312 (38%), Gaps = 69/312 (22%)
Query: 337 LRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSI------------------------ 372
L +L L GNP+ F P S L+ SLE LV +
Sbjct: 82 LSNLILTGNPIQSFSPGSFSGLT-SLENLVAVETKLASLESFPIGQLITLKKLNVAHNFI 140
Query: 373 -SGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQ-----GLYL-ASNNLVGSFP 425
S +P SNL+NL+ + L N + +IT LQ L+ L L S N +
Sbjct: 141 HSCKLPAYFSNLTNLVHVDLSYNYIQ---TITVNDLQFLRENPQVNLSLDMSLNPIDFIQ 197
Query: 426 DELCHIGRLAELALLDNRHSGSI-PSCVSNLTSLRY--LYLGSNR----FTFVIPSTFWS 478
D+ +L EL L N +S +I +C+ NL L L LG + PS
Sbjct: 198 DQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEG 257
Query: 479 LKDILFFDFSSNFLVGTLSFDIGNLKVLLGINLSENNLSG-------DMPATIG------ 525
L D+ +F + S DI L N+S +L+G D+P
Sbjct: 258 LCDVTIDEFRLTY-TNDFSDDIVKFHCL--ANVSAMSLAGVSIKYLEDVPKHFKWQSLSI 314
Query: 526 ---GLKDLQFMDLAYNRL------EGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLF 576
LK +DL + + +G I L SL L+LS+N +S S S L
Sbjct: 315 IRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLG 374
Query: 577 Y--LRELNLSFN 586
LR L+LSFN
Sbjct: 375 TNSLRHLDLSFN 386
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 446 GSIPSCVSNLTSLRYLYLGS--NRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNL 503
GS+ C+ + ++ Y + ++ IPS S K+I D S N L S+ N
Sbjct: 2 GSLNPCIEVVPNITYQCMDQKLSKVPDDIPS---STKNI---DLSFNPLKILKSYSFSNF 55
Query: 504 KVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNK 563
L ++LS + GL L + L N ++ P SF LTSLE L + K
Sbjct: 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETK 115
Query: 564 ISGSIPKSMEKLFYLRELNLSFNELEG-EIPSGGIFANFT 602
++ + +L L++LN++ N + ++P F+N T
Sbjct: 116 LASLESFPIGQLITLKKLNVAHNFIHSCKLP--AYFSNLT 153
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG+VY + + + + L++F+ E VL+K RH N++ + +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 766 DDFKALVLEYMSNGSLGDWLHSSN 789
A+V ++ SL LH+S
Sbjct: 92 PQL-AIVTQWCEGSSLYHHLHASE 114
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 80
Query: 757 IKV----ISSCSNDD--FKALVLEYM 776
+++ SS D + LVL+Y+
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYV 106
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 15/110 (13%)
Query: 694 LQATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEAECEVLKKIR 752
L+ +F E ++G+G FG V AR D AIK + L + +E +L +
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLN 60
Query: 753 H-------------RNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
H RN +K +++ + +EY N +L D +HS N
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSEN 110
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV 98
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV 95
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG+VY + + + + L++F+ E VL+K RH N++ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 766 DDFKALVLEYMSNGSLGDWLH 786
A+V ++ SL LH
Sbjct: 76 PQL-AIVTQWCEGSSLYHHLH 95
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 76
Query: 757 IKV----ISSCSNDD--FKALVLEYMSN 778
+++ SS D + LVL+Y+
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPE 104
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV 95
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 757 IKV----ISSCSNDD--FKALVLEYMSN 778
+++ SS D + LVL+Y+
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPE 103
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 94
Query: 757 IKV----ISSCSNDD--FKALVLEYMSN 778
+++ SS D + LVL+Y+
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPE 122
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLI 757
++ + +IG G FG VY A+L D G +AIK Q A K+ E ++++K+ H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--GKAFKN--RELQIMRKLDHCNIV 76
Query: 758 KV----ISSCSNDD--FKALVLEYMSN 778
++ SS D + LVL+Y+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPE 103
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 103
Query: 757 IKV----ISSCSNDD--FKALVLEYM 776
+++ SS D + LVL+Y+
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYV 129
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 757 IKV----ISSCSNDD--FKALVLEYMSN 778
+++ SS D + LVL+Y+
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTV 96
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 757 IKV----ISSCSNDD--FKALVLEYMSN 778
+++ SS D + LVL+Y+
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLI 757
++ + +IG G FG VY A+L D G +AIK Q A K+ E ++++K+ H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--GKAFKN--RELQIMRKLDHCNIV 76
Query: 758 KV----ISSCSNDD--FKALVLEYMSN 778
++ SS D + LVL+Y+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPE 103
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 109
Query: 757 IKV----ISSCSNDD--FKALVLEYM 776
+++ SS D + LVL+Y+
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYV 135
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 109
Query: 757 IKV----ISSCSNDD--FKALVLEYM 776
+++ SS D + LVL+Y+
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYV 135
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG+VY + + + + L++F+ E VL+K RH N++ + +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 766 DDFKALVLEYMSNGSLGDWLH 786
A+V ++ SL LH
Sbjct: 78 PQL-AIVTQWCEGSSLYHHLH 97
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 546 ESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTA 603
E+F +L +L +L+L +KI P + + LF+L EL L F L + G F N A
Sbjct: 67 EAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKA 124
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%)
Query: 486 DFSSNFLVGTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIP 545
D S F+ S LK L +NL+ N ++ GL +LQ ++L+YN L
Sbjct: 272 DLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYS 331
Query: 546 ESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNEL 588
+F L + ++L KN I+ ++ + L L+ L+L N L
Sbjct: 332 SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL 374
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 39/179 (21%)
Query: 400 ISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLT--- 456
I ++ RL+ L LY L + L L L NR S SC + T
Sbjct: 406 IHLSENRLENLDILYF------------LLRVPHLQILILNQNRFS----SCSGDQTPSE 449
Query: 457 --SLRYLYLGSNRF-----TFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLLGI 509
SL L+LG N T + F L + + N+L +L L G+
Sbjct: 450 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGL 509
Query: 510 NLSENNLS----GDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKI 564
+L+ N L+ D+PA +L+ +D++ N+L P P+ F SL VL+++ NK
Sbjct: 510 SLNSNRLTVLSHNDLPA------NLEILDISRNQLLAPNPDVF---VSLSVLDITHNKF 559
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 115/280 (41%), Gaps = 27/280 (9%)
Query: 333 NCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQ--AISNLSNLLTLV 390
N LR L L + + P + L E L + C +S + + NL L L
Sbjct: 71 NLPNLRILDLGSSKIYFLHPDAFQGLFHLFE-LRLYFCGLSDAVLKDGYFRNLKALTRLD 129
Query: 391 LERNKLTG-PISITFGRLQKLQGLYLASNN--LVGSFPDELCHIGRLAELALLDN----R 443
L +N++ + +FG+L L+ + +SN LV E L+ +L N R
Sbjct: 130 LSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSR 189
Query: 444 HSGSIPSCVSNLTS--LRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIG 501
S C++ + L L + N +T I F SN + + +F +
Sbjct: 190 VSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNF------------SNAISKSQAFSLI 237
Query: 502 NLKVLLGINLSENNLSGDMPATIGGL--KDLQFMDLAYNRLEGPIPESFGDLTSLEVLNL 559
++G +N+ T GL ++ +DL++ + F L L+VLNL
Sbjct: 238 LAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNL 297
Query: 560 SKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFA 599
+ NKI+ ++ L L+ LNLS+N L GE+ S +
Sbjct: 298 AYNKINKIADEAFYGLDNLQVLNLSYN-LLGELYSSNFYG 336
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 456 TSLRYLYLGSNRFTFVIPS-TFWSLKDILFFDFSSNFL---VGTLSFDIGNLKVLLGINL 511
+S+R+L L S+ F F + S F +LKD+ + + N + + + NL+VL NL
Sbjct: 266 SSVRHLDL-SHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVL---NL 321
Query: 512 SENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISG----- 566
S N L + GL + ++DL N + ++F L L+ L+L N ++
Sbjct: 322 SYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIP 381
Query: 567 SIPK---SMEKLFYLRELNLSFN 586
SIP S KL L ++NL+ N
Sbjct: 382 SIPDIFLSGNKLVTLPKINLTAN 404
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 76 LSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNN 135
L L +LNL++NK++ + Y + L+ L+ + N L SS + + + I L N
Sbjct: 289 LKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKN 348
Query: 136 RLS 138
++
Sbjct: 349 HIA 351
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 757 IKV----ISSCSNDD--FKALVLEYMSN 778
+++ SS D + LVL+Y+
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 113
Query: 757 IKV----ISSCSNDD--FKALVLEYM 776
+++ SS D + LVL+Y+
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYV 139
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 154
Query: 757 IKV----ISSCSNDD--FKALVLEYM 776
+++ SS D + LVL+Y+
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYV 180
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 83
Query: 757 IKV----ISSCSNDD--FKALVLEYMSN 778
+++ SS D + LVL+Y+
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPE 111
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 11/85 (12%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLI 757
++ + +IG G FG VY A+L D G +AIK Q A K+ E ++++K+ H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--GKAFKN--RELQIMRKLDHCNIV 76
Query: 758 KV----ISSCSNDD--FKALVLEYM 776
++ SS D + LVL+Y+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYV 101
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG+VY + + + + L++F+ E VL+K RH N++ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 766 DDFKALVLEYMSNGSLGDWLH 786
A+V ++ SL LH
Sbjct: 76 PQL-AIVTQWCEGSSLYHHLH 95
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 88
Query: 757 IKV----ISSCSNDD--FKALVLEYMSN 778
+++ SS D + LVL+Y+
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPE 116
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 14/115 (12%)
Query: 689 SYLELLQATDNFAEN---------NIIGRGGFGSVYGARLE----DGMKIAIKVFH-QQC 734
+Y + QA FA+ +IG G FG V RL+ + +AIK
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 735 ASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
+ F E ++ + H N+I + + +V EYM NGSL +L ++
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKND 118
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 111
Query: 757 IKV----ISSCSNDD--FKALVLEYMSN 778
+++ SS D + LVL+Y+
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPE 139
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV 95
>pdb|2V70|A Chain A, Third Lrr Domain Of Human Slit2
pdb|2V70|B Chain B, Third Lrr Domain Of Human Slit2
pdb|2V70|C Chain C, Third Lrr Domain Of Human Slit2
pdb|2V70|D Chain D, Third Lrr Domain Of Human Slit2
Length = 220
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 442 NRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPST--FWSLKDILFFDFSSNFLVGTLSFD 499
N+ IP + T+ L L +N FT V+ +T F L + +FS+N + +
Sbjct: 20 NQKLNKIPEHIPQYTA--ELRLNNNEFT-VLEATGIFKKLPQLRKINFSNNKIT---DIE 73
Query: 500 IGNLKVLLGIN---LSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEV 556
G + G+N L+ N L GL+ L+ + L NR+ +SF L+S+ +
Sbjct: 74 EGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRL 133
Query: 557 LNLSKNKISGSIPKSMEKLFYLRELNL 583
L+L N+I+ P + + L L LNL
Sbjct: 134 LSLYDNQITTVAPGAFDTLHSLSTLNL 160
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG+VY + + + + L++F+ E VL+K RH N++ + +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 766 DDFKALVLEYMSNGSLGDWLH 786
A+V ++ SL LH
Sbjct: 81 PQL-AIVTQWCEGSSLYHHLH 100
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 87
Query: 757 IKV----ISSCSNDD--FKALVLEYMSN 778
+++ SS D + LVL+Y+
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPE 115
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG+VY + + + + L++F+ E VL+K RH N++ + +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 766 DDFKALVLEYMSNGSLGDWLH 786
A+V ++ SL LH
Sbjct: 81 PQL-AIVTQWCEGSSLYHHLH 100
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV 95
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 87
Query: 757 IKV----ISSCSNDD--FKALVLEYMSN 778
+++ SS D + LVL+Y+
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPE 115
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 699 NFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNL 756
++ + +IG G FG VY A+L D G +AIK Q K F+ E ++++K+ H N+
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 79
Query: 757 IKV----ISSCSNDD--FKALVLEYMSN 778
+++ SS D + LVL+Y+
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPE 107
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 703 NNIIGRGGFGSVYGARL----EDGMKIAIKVFHQ-QCASALKSFEAECEVLKKIRHRNLI 757
IIG G G V RL + + +AIK + F +E ++ + H N+I
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 758 KVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
++ + +V EYM NGSL +L + +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD 145
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 703 NNIIGRGGFGSVYGARL----EDGMKIAIKVFHQ-QCASALKSFEAECEVLKKIRHRNLI 757
IIG G G V RL + + +AIK + F +E ++ + H N+I
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 758 KVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
++ + +V EYM NGSL +L + +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD 145
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTV 121
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV 98
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTV 97
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTV 96
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV 95
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTV 96
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTV 100
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG+VY + + + + L++F+ E VL+K RH N++ + +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 766 DDFKALVLEYMSNGSLGDWLH 786
A+V ++ SL LH
Sbjct: 96 PQL-AIVTQWCEGSSLYHHLH 115
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTV 100
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F IG G FG V + +E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EYM G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM 128
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F IG G FG V + +E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EYM G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM 128
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTV 97
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTV 121
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV 98
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG+VY + + + + L++F+ E VL+K RH N++ + +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 766 DDFKALVLEYMSNGSLGDWLH 786
A+V ++ SL LH
Sbjct: 104 PQL-AIVTQWCEGSSLYHHLH 123
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTV 100
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG+VY + + + + L++F+ E VL+K RH N++ + +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 766 DDFKALVLEYMSNGSLGDWLH 786
A+V ++ SL LH
Sbjct: 103 PQL-AIVTQWCEGSSLYHHLH 122
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 697 TDNFAENNIIGRGGFGSVYGA-RLEDGMKIAIKVFHQQCASAL--KSFEAECEVLKKIRH 753
TD + IG+G F V +L G + A K+ + + SA + E E + + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
N++++ S S + F LV + ++ G L
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGEL 90
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Query: 692 ELLQATDNFAENNIIGRGGFGSVYGARL--EDG--MKIAIKVFHQQ--CASALKSFEAEC 745
++L F ++G+G FGSV A+L EDG +K+A+K+ +S ++ F E
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 746 EVLKKIRHRNLIKVISSCSNDDFKA------LVLEYMSNGSLGDWLHSSN 789
+K+ H ++ K++ K ++L +M +G L +L +S
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR 126
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG+VY + + + + L++F+ E VL+K RH N++ + +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 766 DDFKALVLEYMSNGSLGDWLH 786
A+V ++ SL LH
Sbjct: 104 PQL-AIVTQWCEGSSLYHHLH 123
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCSN 765
IG G FG+VY + + + + L++F+ E VL+K RH N++ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 766 DDFKALVLEYMSNGSLGDWLH 786
A+V ++ SL LH
Sbjct: 76 PQL-AIVTQWCEGSSLYHHLH 95
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + I A+KV + + A E E+ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTV 112
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 698 DNFAENNIIGRGGFGSVYGARLEDGMKI 725
++F+ + IIGRGGFG VYG R D K+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKM 216
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 698 DNFAENNIIGRGGFGSVYGARLEDGMKI 725
++F+ + IIGRGGFG VYG R D K+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKM 216
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 694 LQATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKK 750
L + +NF + IG G +G VY AR + G +A+K + + E +LK+
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSS 788
+ H N++K++ ++ LV E++S L D++ +S
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDAS 98
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 698 DNFAENNIIGRGGFGSVYGARLEDGMKI 725
++F+ + IIGRGGFG VYG R D K+
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKM 215
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 698 DNFAENNIIGRGGFGSVYGARLEDGMKI 725
++F+ + IIGRGGFG VYG R D K+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKM 216
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 704 NIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISS 762
++G G F V+ + G A+K + A S E E VLKKI+H N++ +
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ LV++ +S G L D
Sbjct: 75 YESTTHYYLVMQLVSGGELFD 95
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 694 LQATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKK 750
L + +NF + IG G +G VY AR + G +A+K + + E +LK+
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSS 788
+ H N++K++ ++ LV E++S L D++ +S
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDAS 97
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 19/179 (10%)
Query: 2 AAASSNITTDQQALLALKDHIISDPTNL-LAHNWTSNASVCTWIGIT---------CDVN 51
A+ + D++ L AL + D T L L+ N S+ T + T C++
Sbjct: 9 VASHLEVNCDKRQLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELT 68
Query: 52 SHRVTA-------LDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLK 104
+V LD S LQ ++P L +LT+L++S N+L+ ++ + L+
Sbjct: 69 KLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127
Query: 105 FLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFH 163
L N+L + + + L NN+L+ ELP + N L +L L L +N +
Sbjct: 128 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY 185
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 501 GNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLS 560
G L VL ++LS N L +P L L +D+++NRL + L L+ L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 561 KNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG 595
N++ P + L +L+L+ N+L E+P+G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAG 166
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 19/179 (10%)
Query: 2 AAASSNITTDQQALLALKDHIISDPTNL-LAHNWTSNASVCTWIGIT---------CDVN 51
A+ + D++ L AL + D T L L+ N S+ T + T C++
Sbjct: 9 VASHLEVNCDKRQLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELT 68
Query: 52 SHRVTA-------LDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLK 104
+V LD S LQ ++P L +LT+L++S N+L+ ++ + L+
Sbjct: 69 KLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127
Query: 105 FLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFH 163
L N+L + + + L NN+L+ ELP + N L +L L L +N +
Sbjct: 128 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY 185
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 501 GNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLS 560
G L VL ++LS N L +P L L +D+++NRL + L L+ L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 561 KNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG 595
N++ P + L +L+L+ N+L E+P+G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAG 166
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 19/179 (10%)
Query: 2 AAASSNITTDQQALLALKDHIISDPTNL-LAHNWTSNASVCTWIGIT---------CDVN 51
A+ + D++ L AL + D T L L+ N S+ T + T C++
Sbjct: 9 VASHLEVNCDKRQLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELT 68
Query: 52 SHRVTA-------LDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLK 104
+V LD S LQ ++P L +LT+L++S N+L+ ++ + L+
Sbjct: 69 KLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127
Query: 105 FLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFH 163
L N+L + + + L NN+L+ ELP + N L +L L L +N +
Sbjct: 128 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY 185
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 501 GNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLS 560
G L VL ++LS N L +P L L +D+++NRL + L L+ L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 561 KNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG 595
N++ P + L +L+L+ N+L E+P+G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAG 166
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 681 SQATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFH-QQCA 735
S T+ F+ + L AT N + + ++G G FG V RL+ + +AIK
Sbjct: 2 STQTVHEFA--KELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 58
Query: 736 SALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
+ F E ++ + H N+I++ + +V E M NGSL +L +
Sbjct: 59 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD 112
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 689 SYLELLQATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFH-QQCASALKSFEA 743
+ + L AT N + + ++G G FG V RL+ + +AIK + F
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 744 ECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
E ++ + H N+I++ + +V E M NGSL +L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD 141
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFHQQCASALKS-FEAECEVLKK 750
A ++ N I+G G FG VY + + +A+K + C K F +E ++K
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLH 786
+ H +++K+I + +++E G LG +L
Sbjct: 82 LDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLE 116
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 697 TDNFAENNIIGRGGFGSVYGA-RLEDGMKIAIKVFHQQCASAL--KSFEAECEVLKKIRH 753
TD + +G+G F V ++ G + A K+ + + SA + E E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
N++++ S S + F LV + ++ G L
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL 90
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 17/104 (16%)
Query: 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKK--IRHRN 755
DN +IGRG +G+VY L D +A+KVF + ++F E + + + H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDN 68
Query: 756 LIKVISSCSNDDFKA-------LVLEYMSNGSLGDW--LHSSNY 790
+ + I ++ A LV+EY NGSL + LH+S++
Sbjct: 69 IARFI--VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDW 110
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 19/179 (10%)
Query: 2 AAASSNITTDQQALLALKDHIISDPTNL-LAHNWTSNASVCTWIGIT---------CDVN 51
A+ + D++ L AL + D T L L+ N S+ T + T C++
Sbjct: 9 VASHLEVNCDKRQLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELT 68
Query: 52 SHRVTA-------LDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLK 104
+V LD S LQ ++P L +LT+L++S N+L+ ++ + L+
Sbjct: 69 KLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127
Query: 105 FLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFH 163
L N+L + + + L NN+L+ ELP + N L +L L L +N +
Sbjct: 128 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY 185
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 501 GNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLS 560
G L VL ++LS N L +P L L +D+++NRL + L L+ L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 561 KNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG 595
N++ P + L +L+L+ N+L E+P+G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAG 166
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 697 TDNFAENNIIGRGGFGSVYGA-RLEDGMKIAIKVFHQQCASAL--KSFEAECEVLKKIRH 753
TD + +G+G F V ++ G + A K+ + + SA + E E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
N++++ S S + F LV + ++ G L
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL 90
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 689 SYLELLQATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFH-QQCASALKSFEA 743
+ + L AT N + + ++G G FG V RL+ + +AIK + F
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 744 ECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
E ++ + H N+I++ + +V E M NGSL +L +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD 141
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFHQQCA-SALKSFEAECEVLKK 750
A ++ N I+G G FG VY + + +A+K + C + F +E ++K
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
+ H +++K+I + +++E G LG +L +
Sbjct: 66 LDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNK 103
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 700 FAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFH---QQCASALKSFEAECEVLKKIRHRN 755
F++ IG G FG+VY AR + + +AIK +Q + E L+K+RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 756 LIKVISSCSNDDFKALVLEY 775
I+ + LV+EY
Sbjct: 116 TIQYRGCYLREHTAWLVMEY 135
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE----DGMKIAIKVFHQQCA-SALKSFEAECEVLKK 750
A ++ N I+G G FG VY + + +A+K + C + F +E ++K
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
+ H +++K+I + +++E G LG +L +
Sbjct: 70 LDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNK 107
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 712 GSVYGARLEDGMKIAIKVFHQQCASALKS--FEAECEVLKKIRHRNLIKVISSCSND--D 767
G ++ R + G I +KV + S KS F EC L+ H N++ V+ +C +
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 768 FKALVLEYMSNGSLGDWLHS 787
L+ +M GSL + LH
Sbjct: 83 HPTLITHWMPYGSLYNVLHE 102
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKIRH 753
++F +G+G FG+VY AR I A+KV + + A E E+ +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
N++++ + L+LEY G++
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTV 99
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFHQ---QCASALKSFEAECEVLKKIRH 753
++F +G+G FG+VY AR I A+KV + + A E E+ +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
N++++ + L+LEY G++
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTV 99
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 694 LQATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKK 750
L + +NF + IG G +G VY AR + G +A+K + + E +LK+
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMS 777
+ H N++K++ ++ LV E++S
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLS 88
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGARLEDG-MKIAIKV-FHQQCAS--ALKSFEAECEVLKKIRH 753
D+F +G+G FG+VY AR + +A+KV F Q E E+ + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSS 788
N++++ + + L+LEY G L L S
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS 117
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 700 FAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFH---QQCASALKSFEAECEVLKKIRHRN 755
F++ IG G FG+VY AR + + +AIK +Q + E L+K+RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 756 LIKVISSCSNDDFKALVLEY 775
I+ + LV+EY
Sbjct: 77 TIQYRGCYLREHTAWLVMEY 96
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQ---QCASALKSFEAECEVLKKIRH 753
D+F +G+G FG+VY AR ++ +A+KV + + E E+ +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
N++++ + + L+LE+ G L
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGEL 101
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 20/119 (16%)
Query: 688 FSYLELLQATDNFAEN---------NIIGRGGFGSVYGARLEDGMK----IAIKVFHQ-Q 733
F++ + QA FA+ +IG G FG V RL+ K +AIK
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 734 CASALKSFEAECEVLKKIRHRNLIK---VISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
+ F +E ++ + H N+I V++ C ++ EYM NGSL +L ++
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP---VMIITEYMENGSLDAFLRKND 125
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 12/82 (14%)
Query: 704 NIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFE-AECEVLKKIRHRNLIKVIS- 761
+IG G FG V+ A+L + ++AIK Q K F+ E ++++ ++H N++ + +
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 762 SCSNDD-----FKALVLEYMSN 778
SN D F LVLEY+
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPE 122
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQ---QCASALKSFEAECEVLKKIRH 753
D+F +G+G FG+VY AR ++ +A+KV + + E E+ +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
N++++ + + L+LE+ G L
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGEL 102
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 698 DNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASA-LKSFEAECEVLKKIRHRN 755
D F +G G FG V+ G++ IK ++ + ++ EAE EVLK + H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSL 781
+IK+ + +V+E G L
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGEL 107
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 704 NIIGRGGFGSVYGARL--EDG--MKIAIKVFHQQCAS--ALKSFEAECEVLKKIRHRNLI 757
I+G G FGSV L EDG +K+A+K +S ++ F +E +K H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 758 KVISSCSNDDFKAL-----VLEYMSNGSLGDWL 785
+++ C + + +L +M G L +L
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL 132
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 706 IGRGGFGSVYGA-RLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
IG+G G+VY A + G ++AI+ + Q + E V+++ ++ N++ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 765 NDDFKALVLEYMSNGSLGD 783
D +V+EY++ GSL D
Sbjct: 88 VGDELWVVMEYLAGGSLTD 106
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 706 IGRGGFGSVYGA-RLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
IG+G G+VY A + G ++AI+ + Q + E V+++ ++ N++ + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 765 NDDFKALVLEYMSNGSLGD 783
D +V+EY++ GSL D
Sbjct: 89 VGDELWVVMEYLAGGSLTD 107
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 706 IGRGGFGSVYGA-RLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
IG+G G+VY A + G ++AI+ + Q + E V+++ ++ N++ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 765 NDDFKALVLEYMSNGSLGD 783
D +V+EY++ GSL D
Sbjct: 88 VGDELWVVMEYLAGGSLTD 106
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 706 IGRGGFGSVYGARLED-----GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKV- 759
+G+G FGSV R + G +A+K + F+ E ++LK + ++K
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 760 -ISSCSNDDFKALVLEYMSNGSLGDWLH 786
+S LV+EY+ +G L D+L
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ 105
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 706 IGRGGFGSVYGA-RLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
IG+G G+VY A + G ++AI+ + Q + E V+++ ++ N++ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 765 NDDFKALVLEYMSNGSLGD 783
D +V+EY++ GSL D
Sbjct: 88 VGDELWVVMEYLAGGSLTD 106
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 706 IGRGGFGSVYGA-RLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
IG+G G+VY A + G ++AI+ + Q + E V+++ ++ N++ + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 765 NDDFKALVLEYMSNGSLGD 783
D +V+EY++ GSL D
Sbjct: 89 VGDELWVVMEYLAGGSLTD 107
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 699 NFAENNIIGRGGFGSVYGA-RLEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRHR 754
N+ +G G FG V A G K+A+K+ +++ + E E L+ +RH
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 755 NLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
++IK+ + D +V+EY N L D++
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI 98
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 509 INLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
+ L N L L L + L+ N+++ F LT L +L L +NK+ S+
Sbjct: 33 LELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ-SL 91
Query: 569 PKSM-EKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNELLCGLPNLQVQPCKVSK 627
P + +KL L+EL L N+L+ +P GIF T+ + L P S
Sbjct: 92 PNGVFDKLTQLKELALDTNQLKS-VPD-GIFDRLTSLQKIW---------LHTNPWDCSC 140
Query: 628 PRTEHKSR 635
PR ++ SR
Sbjct: 141 PRIDYLSR 148
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 375 NIPQAI-SNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELC-HIG 432
++P + L+ L L L +N++ F +L KL LYL N L S P+ + +
Sbjct: 42 SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL-QSLPNGVFDKLT 100
Query: 433 RLAELALLDNRHSGSIPSCV-SNLTSLRYLYLGSNRFTFVIP 473
+L ELAL D S+P + LTSL+ ++L +N + P
Sbjct: 101 QLKELAL-DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 54 RVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHT-LKFLDFTDNQ 112
++T L SQ +Q L+ LTIL L NKL S+P+ ++ T LK L NQ
Sbjct: 53 QLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ-SLPNGVFDKLTQLKELALDTNQ 111
Query: 113 LSGSVSSFVFN-MSSIVDIRLTNNRLSGELPK 143
L SV +F+ ++S+ I L N P+
Sbjct: 112 LK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 16/126 (12%)
Query: 38 ASVCTWIGITCDVNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSI 97
S C+ G NS +T++ T IPS S T L L NKL S+P +
Sbjct: 2 PSRCSCSGTEIRCNSKGLTSVPTG-------IPS------SATRLELESNKLQ-SLPHGV 47
Query: 98 YTMHT-LKFLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALF 156
+ T L L + NQ+ ++ + + L N+L LP + + L LK L
Sbjct: 48 FDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQS-LPNGVFDKLTQLKELA 106
Query: 157 LDKNMF 162
LD N
Sbjct: 107 LDTNQL 112
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 706 IGRGGFGSVYGARLED-----GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKV- 759
+G+G FGSV R + G +A+K + F+ E ++LK + ++K
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 760 -ISSCSNDDFKALVLEYMSNGSLGDWLH 786
+S LV+EY+ +G L D+L
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQ 102
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 706 IGRGGFGSVYGARLED-----GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKV- 759
+G+G FGSV R + G +A+K + F+ E ++LK + ++K
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 760 -ISSCSNDDFKALVLEYMSNGSLGDWLH 786
+S LV+EY+ +G L D+L
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ 106
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 699 NFAENNIIGRGGFGSVYGA-RLEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRHR 754
N+ +G G FG V A G K+A+K+ +++ + E E L+ +RH
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 755 NLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
++IK+ + D +V+EY N L D++
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI 94
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 703 NNIIGRGGFGSVYGARLEDGMK----IAIKVFHQ-QCASALKSFEAECEVLKKIRHRNLI 757
+IG G FG V RL+ K +AIK + F +E ++ + H N+I
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 758 KVISSCSNDDFKALVLEYMSNGSLGDWLH 786
++ +N ++ E+M NG+L +L
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLR 109
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 699 NFAENNIIGRGGFGSVYGA-RLEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRHR 754
N+ +G G FG V A G K+A+K+ +++ + E E L+ +RH
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 755 NLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
++IK+ + D +V+EY N L D++
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI 103
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 706 IGRGGFGSVYGARLED-----GMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKV- 759
+G+G FGSV R + G +A+K + F+ E ++LK + ++K
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 760 -ISSCSNDDFKALVLEYMSNGSLGDWLH 786
+S LV+EY+ +G L D+L
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ 118
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 703 NNIIGRGGFGSVYGARLEDGMK----IAIKVFHQ-QCASALKSFEAECEVLKKIRHRNLI 757
+IG G FG V RL+ K +AIK + F +E ++ + H N+I
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 758 KVISSCSNDDFKALVLEYMSNGSLGDWLH 786
++ +N ++ E+M NG+L +L
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLR 107
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 15/110 (13%)
Query: 694 LQATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALKSFEAECEVLKKIR 752
L+ +F E ++G+G FG V AR D AIK + L + +E +L +
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLN 60
Query: 753 H-------------RNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
H RN +K ++ + EY N +L D +HS N
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN 110
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 444 HSGSIPSCVSNLTSLRYLYLGSNRF---TFVIPSTFWSLKDILFFDFSSNFLVGTLSFDI 500
H +PS + L++L+ L L +N+F + S F SL + + +GT +
Sbjct: 289 HLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLE- 347
Query: 501 GNLKVLLGINLSENNL--SGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLN 558
NL+ L ++LS +++ S + L LQ ++L+YN E+F + LE+L+
Sbjct: 348 -NLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLD 406
Query: 559 LSKNKISGSIPKS-MEKLFYLRELNLSFNELEGEIPSGGIFANFTA 603
L+ ++ +S + L L+ LNLS + L +I S +F A
Sbjct: 407 LAFTRLKVKDAQSPFQNLHLLKVLNLSHSLL--DISSEQLFDGLPA 450
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 112/286 (39%), Gaps = 43/286 (15%)
Query: 342 LAGNPLDGFLPSSIGNLSKSLETL-VIANCSISGNIPQAISNLSNLLTLVLERNKLTGPI 400
L N + G LP+S L S L I N + S L NL L L R ++
Sbjct: 22 LGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFS--------RLINLTFLDLTRCQIYWIH 73
Query: 401 SITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRY 460
TF +L L L +N L+ L L L + S + N +L
Sbjct: 74 EDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLES 133
Query: 461 LYLGSNRFTFV-IPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVL--LGINLSENNLS 517
LYLGSN + + +P F + K + DF +N + D+ +L+ L +NL+ N+++
Sbjct: 134 LYLGSNHISSIKLPKGFPTEK-LKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192
Query: 518 GDMPAT----------IGGLKDL------------------QFMDLAYNRLEGPIPESFG 549
G P GG ++L F D+ + + E
Sbjct: 193 GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLC 252
Query: 550 DLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG 595
++ S+E +NL K+ + L+EL+L+ L E+PSG
Sbjct: 253 EM-SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHL-SELPSG 296
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 500 IGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNL 559
+G L++L+ LS +LS LK + +DL++NRL E+ L + LNL
Sbjct: 475 LGRLEILV---LSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNL 530
Query: 560 SKNKISGSIPKSMEKLFYLRELNLSFNELE 589
+ N IS +P + L R +NL N L+
Sbjct: 531 ASNHISIILPSLLPILSQQRTINLRQNPLD 560
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 80/223 (35%), Gaps = 50/223 (22%)
Query: 376 IPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLA 435
+P + LS L LVL NK I+ L L + N +
Sbjct: 293 LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNT-------------KRL 339
Query: 436 ELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGT 495
EL C+ NL +LR L L + DI D
Sbjct: 340 ELG----------TGCLENLENLRELDLSHD--------------DIETSD--------C 367
Query: 496 LSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPES-FGDLTSL 554
+ + NL L +NLS N L+ +DLA+ RL+ +S F +L L
Sbjct: 368 CNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLL 427
Query: 555 EVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGI 597
+VLNLS + + S + + L L+ LNL N P G I
Sbjct: 428 KVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHF----PKGNI 466
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 699 NFAENNIIGRGGFGSVYGA-RLEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRHR 754
N+ +G G FG V A G K+A+K+ +++ + E E L+ +RH
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 755 NLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
++IK+ + D +V+EY N L D++
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI 104
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 706 IGRGGFGSVYGARL------EDGMKIAIKVFHQQCASALKS-FEAECEVLKKIRHRNLIK 758
+G FG VY L E +AIK + L+ F E + +++H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 759 VISSCSNDDFKALVLEYMSNGSLGDWL 785
++ + D +++ Y S+G L ++L
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFL 120
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIR 752
+ +NF + IG G +G VY AR + G +A+K + + E +LK++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 753 HRNLIKVISSCSNDDFKALVLEYMS 777
H N++K++ ++ LV E++S
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLS 86
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIR 752
+ +NF + IG G +G VY AR + G +A+K + + E +LK++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSS 788
H N++K++ ++ LV E++ + L D++ +S
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDAS 95
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 88/244 (36%), Gaps = 26/244 (10%)
Query: 376 IPQA-ISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASN-NLVGSFPDELCHIGR 433
+P A + NL L L N L G + F L L+ L L+ N L P +G
Sbjct: 46 VPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGH 105
Query: 434 LAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLV 493
L L L P L +L+YLYL N + +TF
Sbjct: 106 LHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTF----------------- 148
Query: 494 GTLSFDIGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTS 553
D+GNL L L N + GL L + L N + P +F DL
Sbjct: 149 ----RDLGNLTHLF---LHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGR 201
Query: 554 LEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNELLC 613
L L L N +S + + L L+ L L+ N + + ++A +E+ C
Sbjct: 202 LMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPC 261
Query: 614 GLPN 617
LP
Sbjct: 262 NLPQ 265
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 44/109 (40%)
Query: 361 SLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNL 420
+L+ L + + ++ +L NL L L N++ F L L L L N++
Sbjct: 129 ALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHV 188
Query: 421 VGSFPDELCHIGRLAELALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFT 469
P +GRL L L N S + L SL+YL L N +
Sbjct: 189 ARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDNPWV 237
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D++ +G G F V R + G + A K ++ S+ + E E +L++
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
IRH N+I + N L+LE +S G L D+L
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 106
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQ---QCASALKSFEAECEVLKKIRH 753
D+F +G+G FG+VY AR ++ +A+KV + + E E+ +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
N++++ + + L+LE+ G L
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGEL 101
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 701 AENNI-----IGRGGFGSVYGARL-EDGMKIAIKVF-------HQQCASALKSFEAECEV 747
A+N I IG+GGFG V+ RL +D +AIK + + F+ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 748 LKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
+ + H N++K+ N +V+E++ G L
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDL 108
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D++ +G G F V R + G + A K ++ S+ + E E +L++
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
IRH N+I + N L+LE +S G L D+L
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 99
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 2 AAASSNITTDQQALLALKDHIISDPTNL-LAHNWTSNASVCTWIGIT---------CDVN 51
A+ + D++ L AL + D T L L+ N S+ T + T C++
Sbjct: 9 VASHLEVNCDKRDLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELT 68
Query: 52 SHRVTA-------LDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLK 104
+V LD S LQ ++P L +LT+L++S N+L+ ++ + L+
Sbjct: 69 KLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127
Query: 105 FLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFH 163
L N+L + + + L NN L+ ELP + N L +L L L +N +
Sbjct: 128 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLT-ELPAGLLNGLENLDTLLLQENSLY 185
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 501 GNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLS 560
G L VL ++LS N L +P L L +D+++NRL + L L+ L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 561 KNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG 595
N++ P + L +L+L+ N+L E+P+G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNDLT-ELPAG 166
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 701 AENNI-----IGRGGFGSVYGARL-EDGMKIAIKVF-------HQQCASALKSFEAECEV 747
A+N I IG+GGFG V+ RL +D +AIK + + F+ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 748 LKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
+ + H N++K+ N +V+E++ G L
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDL 108
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 698 DNFAENNIIGRGGFGSVYGA-RLEDGMKIAIKVFHQQ---CASALKS-----FEAECEVL 748
D + + +G G G V A + K+AIK+ ++ SA ++ E E E+L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 749 KKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGD 783
KK+ H +IK+ + +D+ +VLE M G L D
Sbjct: 76 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFD 109
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 706 IGRGGFGSVYGARL------EDGMKIAIKVFHQQCASALKS-FEAECEVLKKIRHRNLIK 758
+G FG VY L E +AIK + L+ F E + +++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 759 VISSCSNDDFKALVLEYMSNGSLGDWL 785
++ + D +++ Y S+G L ++L
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFL 103
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 698 DNFAENNIIGRGGFGSVYGA-RLEDGMKIAIKVFHQQ---CASALKS-----FEAECEVL 748
D + + +G G G V A + K+AIK+ ++ SA ++ E E E+L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 749 KKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGD 783
KK+ H +IK+ + +D+ +VLE M G L D
Sbjct: 69 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFD 102
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 706 IGRGGFGSVYGARL-EDGMKIAIKVF-------HQQCASALKSFEAECEVLKKIRHRNLI 757
IG+GGFG V+ RL +D +AIK + + F+ E ++ + H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 758 KVISSCSNDDFKALVLEYMSNGSL 781
K+ N +V+E++ G L
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDL 108
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 698 DNFAENNIIGRGGFGSVYGA-RLEDGMKIAIKVFHQQ---CASALKS-----FEAECEVL 748
D + + +G G G V A + K+AIK+ ++ SA ++ E E E+L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 749 KKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGD 783
KK+ H +IK+ + +D+ +VLE M G L D
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFD 103
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 2 AAASSNITTDQQALLALKDHIISDPTNL-LAHNWTSNASVCTWIGIT---------CDVN 51
A+ + D++ L AL + D T L L+ N S+ T + T C++
Sbjct: 9 VASHLEVNCDKRDLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELT 68
Query: 52 SHRVTA-------LDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLK 104
+V LD S LQ ++P L +LT+L++S N+L+ ++ + L+
Sbjct: 69 KLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127
Query: 105 FLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFH 163
L N+L + + + L NN L+ ELP + N L +L L L +N +
Sbjct: 128 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY 185
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 501 GNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLS 560
G L VL ++LS N L +P L L +D+++NRL + L L+ L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 561 KNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG 595
N++ P + L +L+L+ N L E+P+G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAG 166
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 698 DNFAENNIIGRGGFGSVYGA-RLEDGMKIAIKVFHQQ---CASALKS-----FEAECEVL 748
D + + +G G G V A + K+AIK+ ++ SA ++ E E E+L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 749 KKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGD 783
KK+ H +IK+ + +D+ +VLE M G L D
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFD 103
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 534 DLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEGEIP 593
DL+ +++ + F T LE L L++N+I+ + L +L+EL L N+L+ +P
Sbjct: 281 DLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLKELALDTNQLKS-VP 339
Query: 594 SGGIFANFTAESFMGNELLCGLPNLQVQPCKVSKPRTEHKSR 635
GIF T+ + L P S PR ++ SR
Sbjct: 340 D-GIFDRLTSLQKIW---------LHTNPWDCSCPRIDYLSR 371
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 698 DNFAENNIIGRGGFGSVYGA-RLEDGMKIAIKVFHQQ---CASALKS-----FEAECEVL 748
D + + +G G G V A + K+AIK+ ++ SA ++ E E E+L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 749 KKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGD 783
KK+ H +IK+ + +D+ +VLE M G L D
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFD 103
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 19/140 (13%)
Query: 662 KLIECGKRSTVLSNDSILSSQATLRRFSYLELL---------QATDNFAENNIIGRGGFG 712
+L+ GKR + +N I S + + F + +L D + + +G G G
Sbjct: 104 ELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACG 163
Query: 713 SVYGA-RLEDGMKIAIKVFHQQ---CASALKS-----FEAECEVLKKIRHRNLIKVISSC 763
V A + K+AI++ ++ SA ++ E E E+LKK+ H +IK+ +
Sbjct: 164 EVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF 223
Query: 764 SNDDFKALVLEYMSNGSLGD 783
+D+ +VLE M G L D
Sbjct: 224 DAEDY-YIVLELMEGGELFD 242
>pdb|1DCE|A Chain A, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
pdb|1DCE|C Chain C, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
Length = 567
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 68 TIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSI 127
T+ L L +T L+LSHN+L +P ++ + L+ L +DN L V N+ +
Sbjct: 454 TVLCHLEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALEN--VDGVANLPRL 510
Query: 128 VDIRLTNNRLS 138
++ L NNRL
Sbjct: 511 QELLLCNNRLQ 521
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 697 TDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALKSFEA---ECEVLKKIR 752
+D + ++G+G FG V + + G + A+KV ++ E+ E ++LK++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSNGSLGD 783
H N++K+ + + LV E + G L D
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFD 121
>pdb|1LTX|A Chain A, Structure Of Rab Escort Protein-1 In Complex With Rab
Geranylgeranyl Transferase And Isoprenoid
Length = 567
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 68 TIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSI 127
T+ L L +T L+LSHN+L +P ++ + L+ L +DN L V N+ +
Sbjct: 454 TVLCHLEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALEN--VDGVANLPRL 510
Query: 128 VDIRLTNNRLS 138
++ L NNRL
Sbjct: 511 QELLLCNNRLQ 521
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 34.7 bits (78), Expect = 0.22, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 389 LVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSI 448
L L N++T F L LQ LY SN L + +L +L L DN H SI
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN-HLKSI 96
Query: 449 P-SCVSNLTSLRYLYLGSN 466
P NL SL ++YL +N
Sbjct: 97 PRGAFDNLKSLTHIYLYNN 115
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 33/78 (42%)
Query: 437 LALLDNRHSGSIPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTL 496
L L +N+ + P +L +L+ LY SN+ T + F L + D + N L
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIP 97
Query: 497 SFDIGNLKVLLGINLSEN 514
NLK L I L N
Sbjct: 98 RGAFDNLKSLTHIYLYNN 115
Score = 29.3 bits (64), Expect = 9.3, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 50 VNSHRVTALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHT-LKFLDF 108
+N++++T L+ P +L +L L + NKL+ ++P+ ++ T L LD
Sbjct: 40 LNNNQITKLE----------PGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDL 88
Query: 109 TDNQLSGSVSSFVFNMSSIVDIRLTNN 135
DN L N+ S+ I L NN
Sbjct: 89 NDNHLKSIPRGAFDNLKSLTHIYLYNN 115
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 19/140 (13%)
Query: 662 KLIECGKRSTVLSNDSILSSQATLRRFSYLELL---------QATDNFAENNIIGRGGFG 712
+L+ GKR + +N I S + + F + +L D + + +G G G
Sbjct: 90 ELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACG 149
Query: 713 SVYGA-RLEDGMKIAIKVFHQQ---CASALKS-----FEAECEVLKKIRHRNLIKVISSC 763
V A + K+AI++ ++ SA ++ E E E+LKK+ H +IK+ +
Sbjct: 150 EVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF 209
Query: 764 SNDDFKALVLEYMSNGSLGD 783
+D+ +VLE M G L D
Sbjct: 210 DAEDY-YIVLELMEGGELFD 228
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + +E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 694 LQATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKK 750
L + +NF + IG G +G VY AR + G +A+K + + E +LK+
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSN 778
+ H N++K++ ++ LV E++
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 2 AAASSNITTDQQALLALKDHIISDPTNL-LAHNWTSNASVCTWIGIT---------CDVN 51
A+ + D++ L AL + D T L L+ N S+ T + T C++
Sbjct: 10 VASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELT 69
Query: 52 SHRVTA-------LDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLK 104
+V LD S LQ ++P L +LT+L++S N+L+ ++ + L+
Sbjct: 70 KLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 128
Query: 105 FLDFTDNQLSGSVSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFH 163
L N+L + + + L NN L+ ELP + N L +L L L +N +
Sbjct: 129 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY 186
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 501 GNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLS 560
G L VL ++LS N L +P L L +D+++NRL + L L+ L L
Sbjct: 75 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 133
Query: 561 KNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG 595
N++ P + L +L+L+ N L E+P+G
Sbjct: 134 GNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAG 167
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 694 LQATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKK 750
L + +NF + IG G +G VY AR + G +A+K + + E +LK+
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSN 778
+ H N++K++ ++ LV E++
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQ 90
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 509 INLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
I L +N + P K L+ +DL+ N++ P++F L SL L L NKI+ +
Sbjct: 37 IRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-EL 95
Query: 569 PKSM 572
PKS+
Sbjct: 96 PKSL 99
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 61/152 (40%), Gaps = 37/152 (24%)
Query: 335 KKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQ---------------- 378
KKLR + L+ N + P + L +SL +LV+ I+ +P+
Sbjct: 56 KKLRRIDLSNNQISELAPDAFQGL-RSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNA 113
Query: 379 ---------AISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELC 429
A +L NL L L NKL TF L+ +Q ++LA N + C
Sbjct: 114 NKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD-----C 168
Query: 430 HIGRLAELALLDNRHSGSIPSCVSNLTSLRYL 461
H+ LA D H+ I + + TS R L
Sbjct: 169 HLKWLA-----DYLHTNPIETSGARCTSPRRL 195
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 509 INLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
I L +N + P K L+ +DL+ N++ P++F L SL L L NKI+ +
Sbjct: 37 IRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-EL 95
Query: 569 PKSM 572
PKS+
Sbjct: 96 PKSL 99
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 61/152 (40%), Gaps = 37/152 (24%)
Query: 335 KKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQ---------------- 378
KKLR + L+ N + P + L +SL +LV+ I+ +P+
Sbjct: 56 KKLRRIDLSNNQISELAPDAFQGL-RSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNA 113
Query: 379 ---------AISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELC 429
A +L NL L L NKL TF L+ +Q ++LA N + C
Sbjct: 114 NKINXLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD-----C 168
Query: 430 HIGRLAELALLDNRHSGSIPSCVSNLTSLRYL 461
H+ LA D H+ I + + TS R L
Sbjct: 169 HLKWLA-----DYLHTNPIETSGARCTSPRRL 195
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 697 TDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALKSFEA---ECEVLKKIR 752
+D + ++G+G FG V + + G + A+KV ++ E+ E ++LK++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSNGSLGD 783
H N++K+ + + LV E + G L D
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFD 115
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 697 TDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALKSFEA---ECEVLKKIR 752
+D + ++G+G FG V + + G + A+KV ++ E+ E ++LK++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSNGSLGD 783
H N++K+ + + LV E + G L D
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFD 138
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHR 754
+NF + IG G +G VY AR + G +A+K + + E +LK++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 755 NLIKVISSCSNDDFKALVLEYMSN 778
N++K++ ++ LV E++
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ 93
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 34.3 bits (77), Expect = 0.30, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 696 ATDNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQ---QCASALKSFEAECEVLKKI 751
A ++F +G+G FG+VY AR + +A+KV + + A E E+ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
RH N++++ + L+LEY G++
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTV 92
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 697 TDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALKSFEA---ECEVLKKIR 752
+D + ++G+G FG V + + G + A+KV ++ E+ E ++LK++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSNGSLGD 783
H N++K+ + + LV E + G L D
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFD 139
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 509 INLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
+N E +L+ +PA I Q + L N++ P F LT L LNL+ N+++
Sbjct: 24 VNCQERSLAS-VPAGIP--TTTQVLHLYINQITKLEPGVFDSLTQLTYLNLAVNQLTALP 80
Query: 569 PKSMEKLFYLRELNLSFNELEGEIPSGGIFANF 601
+KL L L L N+L+ IP G+F N
Sbjct: 81 VGVFDKLTKLTHLALHINQLK-SIPM-GVFDNL 111
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHR 754
+NF + IG G +G VY AR + G +A+K + + E +LK++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 755 NLIKVISSCSNDDFKALVLEYMSN 778
N++K++ ++ LV E++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHR 754
+NF + IG G +G VY AR + G +A+K + + E +LK++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 755 NLIKVISSCSNDDFKALVLEYMSN 778
N++K++ ++ LV E++
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ 93
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHR 754
+NF + IG G +G VY AR + G +A+K + + E +LK++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 755 NLIKVISSCSNDDFKALVLEYMSN 778
N++K++ ++ LV E++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIR 752
+ +NF + IG G +G VY AR + G +A+K + + E +LK++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSN 778
H N++K++ ++ LV E++
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ 88
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIR 752
+ +NF + IG G +G VY AR + G +A+K + + E +LK++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSN 778
H N++K++ ++ LV E++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ 89
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIR 752
+ +NF + IG G +G VY AR + G +A+K + + E +LK++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSN 778
H N++K++ ++ LV E++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ 89
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 20/112 (17%)
Query: 695 QATDNFAEN---------NIIGRGGFGSVYGARLEDGMK----IAIKVFHQ-QCASALKS 740
QA FA+ +IG G FG V RL+ K +AIK +
Sbjct: 2 QAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD 61
Query: 741 FEAECEVLKKIRHRNLIK---VISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
F +E ++ + H N+I V++ C ++ EYM NGSL +L ++
Sbjct: 62 FLSEASIMGQFDHPNIIHLEGVVTKCKP---VMIITEYMENGSLDAFLRKND 110
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIR 752
+ +NF + IG G +G VY AR + G +A+K + + E +LK++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSN 778
H N++K++ ++ LV E++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIR 752
+ +NF + IG G +G VY AR + G +A+K + + E +LK++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSN 778
H N++K++ ++ LV E++
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHR 754
+NF + IG G +G VY AR + G +A+K + + E +LK++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 755 NLIKVISSCSNDDFKALVLEYMSN 778
N++K++ ++ LV E++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHR 754
+NF + IG G +G VY AR + G +A+K + + E +LK++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 755 NLIKVISSCSNDDFKALVLEYMSN 778
N++K++ ++ LV E++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHR 754
+NF + IG G +G VY AR + G +A+K + + E +LK++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 755 NLIKVISSCSNDDFKALVLEYMSN 778
N++K++ ++ LV E++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIR 752
+ +NF + IG G +G VY AR + G +A+K + + E +LK++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSN 778
H N++K++ ++ LV E++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIR 752
+ +NF + IG G +G VY AR + G +A+K + + E +LK++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSN 778
H N++K++ ++ LV E++
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIR 752
+ +NF + IG G +G VY AR + G +A+K + + E +LK++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSN 778
H N++K++ ++ LV E++
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ 88
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIR 752
+ +NF + IG G +G VY AR + G +A+K + + E +LK++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSN 778
H N++K++ ++ LV E++
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ 88
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHR 754
+NF + IG G +G VY AR + G +A+K + + E +LK++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 755 NLIKVISSCSNDDFKALVLEYMSN 778
N++K++ ++ LV E++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHR 754
+NF + IG G +G VY AR + G +A+K + + E +LK++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 755 NLIKVISSCSNDDFKALVLEYMSN 778
N++K++ ++ LV E++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHR 754
+NF + IG G +G VY AR + G +A+K + + E +LK++ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 755 NLIKVISSCSNDDFKALVLEYMSN 778
N++K++ ++ LV E++
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ 90
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIR 752
+ +NF + IG G +G VY AR + G +A+K + + E +LK++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSN 778
H N++K++ ++ LV E++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHR 754
+NF + IG G +G VY AR + G +A+K + + E +LK++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 755 NLIKVISSCSNDDFKALVLEYMSN 778
N++K++ ++ LV E++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIR 752
+ +NF + IG G +G VY AR + G +A+K + + E +LK++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSN 778
H N++K++ ++ LV E++
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHR 754
+NF + IG G +G VY AR + G +A+K + + E +LK++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 755 NLIKVISSCSNDDFKALVLEYMSN 778
N++K++ ++ LV E++
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 34/178 (19%)
Query: 332 ANCKKLRSLKLAGNPLDGFLPSSIGNLSK--SLETLVIANCSISGNIPQAISNLSNLLTL 389
AN L L ++ N + S I L+K +LE+L+ N IS P I L+NL L
Sbjct: 170 ANLTTLERLDISSNKV-----SDISVLAKLTNLESLIATNNQISDITPLGI--LTNLDEL 222
Query: 390 VLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIP 449
L N+L I T L L L LA+N + P L + +L EL L N+ S P
Sbjct: 223 SLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 278
Query: 450 --------------------SCVSNLTSLRYLYLGSNRFTFVIP-STFWSLKDILFFD 486
S +SNL +L YL L N + + P S+ L+ + F++
Sbjct: 279 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN 336
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 34/178 (19%)
Query: 332 ANCKKLRSLKLAGNPLDGFLPSSIGNLSK--SLETLVIANCSISGNIPQAISNLSNLLTL 389
AN L L ++ N + S I L+K +LE+L+ N IS P I L+NL L
Sbjct: 170 ANLTTLERLDISSNKV-----SDISVLAKLTNLESLIATNNQISDITPLGI--LTNLDEL 222
Query: 390 VLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIP 449
L N+L I T L L L LA+N + P L + +L EL L N+ S P
Sbjct: 223 SLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 278
Query: 450 --------------------SCVSNLTSLRYLYLGSNRFTFVIP-STFWSLKDILFFD 486
S +SNL +L YL L N + + P S+ L+ + F++
Sbjct: 279 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN 336
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 703 NNIIGRGGFGSVYGARLEDGMK----IAIKVFHQ-QCASALKSFEAECEVLKKIRHRNLI 757
+IG G FG V RL+ K +AIK + F +E ++ + H N+I
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 758 K---VISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
V++ C ++ EYM NGSL +L ++
Sbjct: 73 HLEGVVTKCKP---VMIITEYMENGSLDAFLRKND 104
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 509 INLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSI 568
+NL ENN+ T L L+ + L N + +F L SL L L N ++
Sbjct: 80 LNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIP 139
Query: 569 PKSMEKLFYLRELNLSFNELEGEIPS 594
+ E L LREL L N +E IPS
Sbjct: 140 SGAFEYLSKLRELWLRNNPIES-IPS 164
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIR 752
+ +NF + IG G +G VY AR + G +A+K + + E +LK++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSN 778
H N++K++ ++ LV E++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 57 ALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGS 116
LD S LQ ++P L +LT+L++S N+L+ ++ + L+ L N+L
Sbjct: 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTL 139
Query: 117 VSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFH 163
+ + + L NN L+ ELP + N L +L L L +N +
Sbjct: 140 PPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY 185
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 501 GNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLS 560
G L VL ++LS N L +P L L +D+++NRL + L L+ L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 561 KNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG 595
N++ P + L +L+L+ N L E+P+G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAG 166
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQC------ASALKSFEAECEVLKK 750
D++ +G G F V R + G + A K ++ + + E E +L++
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
IRH N+I + N L+LE +S G L D+L
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 120
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 706 IGRGGFGSV----YGARLED-GMKIAIKVFHQQCASALKS-FEAECEVLKKIRHRNLIKV 759
+G G FG V Y + G +A+K +S ++ E ++L+ + H ++IK
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 760 ISSCSNDDFKAL--VLEYMSNGSLGDWL 785
C + +L V+EY+ GSL D+L
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL 126
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 57 ALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGS 116
LD S LQ ++P L +LT+L++S N+L+ ++ + L+ L N+L
Sbjct: 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTL 139
Query: 117 VSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFH 163
+ + + L NN L+ ELP + N L +L L L +N +
Sbjct: 140 PPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY 185
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 501 GNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLS 560
G L VL ++LS N L +P L L +D+++NRL + L L+ L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 561 KNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG 595
N++ P + L +L+L+ N L E+P+G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAG 166
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 694 LQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSFE-AECEVLKKI 751
+ ++ F + +G G + +VY G G+ +A+K S E ++K++
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSN 778
+H N++++ ++ LV E+M N
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDN 87
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 692 ELLQATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKV---FHQQCASALKSFEAECEV 747
+L +++ +IGRG FG V R + K+ A+K+ F S F E ++
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 748 LKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
+ ++++ + +D + +V+EYM G L
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL 161
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 692 ELLQATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKV---FHQQCASALKSFEAECEV 747
+L +++ +IGRG FG V R + K+ A+K+ F S F E ++
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 748 LKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
+ ++++ + +D + +V+EYM G L
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL 156
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 699 NFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLI 757
+F E +IG GGFG V+ A+ DG IK A E E + L K+ H N++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIV 67
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 34/178 (19%)
Query: 332 ANCKKLRSLKLAGNPLDGFLPSSIGNLSK--SLETLVIANCSISGNIPQAISNLSNLLTL 389
AN L L ++ N + S I L+K +LE+L+ N IS P I L+NL L
Sbjct: 174 ANLTTLERLDISSNKV-----SDISVLAKLTNLESLIATNNQISDITPLGI--LTNLDEL 226
Query: 390 VLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIP 449
L N+L I T L L L LA+N + P L + +L EL L N+ S P
Sbjct: 227 SLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 282
Query: 450 --------------------SCVSNLTSLRYLYLGSNRFTFVIP-STFWSLKDILFFD 486
S +SNL +L YL L N + + P S+ L+ + F++
Sbjct: 283 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN 340
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 712 GSVYGARLEDGMKIAIKVFHQQCASALKS--FEAECEVLKKIRHRNLIKVISSCSND--D 767
G ++ R + G I +KV + S KS F EC L+ H N++ V+ +C +
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 768 FKALVLEYMSNGSLGDWLHS 787
L+ + GSL + LH
Sbjct: 83 HPTLITHWXPYGSLYNVLHE 102
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 692 ELLQATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKV---FHQQCASALKSFEAECEV 747
+L +++ +IGRG FG V R + K+ A+K+ F S F E ++
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 748 LKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
+ ++++ + +D + +V+EYM G L
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL 161
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 34/178 (19%)
Query: 332 ANCKKLRSLKLAGNPLDGFLPSSIGNLSK--SLETLVIANCSISGNIPQAISNLSNLLTL 389
AN L L ++ N + S I L+K +LE+L+ N IS P I L+NL L
Sbjct: 169 ANLTTLERLDISSNKV-----SDISVLAKLTNLESLIATNNQISDITPLGI--LTNLDEL 221
Query: 390 VLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIP 449
L N+L I T L L L LA+N + P L + +L EL L N+ S P
Sbjct: 222 SLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 277
Query: 450 --------------------SCVSNLTSLRYLYLGSNRFTFVIP-STFWSLKDILFFD 486
S +SNL +L YL L N + + P S+ L+ + F++
Sbjct: 278 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN 335
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 57 ALDTSQFNLQGTIPSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGS 116
LD S LQ ++P L +LT+L++S N+L+ ++ + L+ L N+L
Sbjct: 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTL 139
Query: 117 VSSFVFNMSSIVDIRLTNNRLSGELPKNICNYLPHLKALFLDKNMFH 163
+ + + L NN L+ ELP + N L +L L L +N +
Sbjct: 140 PPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY 185
Score = 29.3 bits (64), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 501 GNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLS 560
G L VL ++LS N L +P L L +D+++NRL + L L+ L L
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 561 KNKISGSIPKSMEKLFYLRELNLSFNELEGEIPSG 595
N++ P + L +L+L+ N L E+P+G
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAG 166
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 696 ATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIR 752
+ +NF + IG G +G VY AR + G +A+K + + E +LK++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSN 778
H N++K++ ++ LV E++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQ 89
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 698 DNFAENNIIGRGGFGSVYG-ARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNL 756
D++ + +G G FG V+ G A K S ++ E + + +RH L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 757 IKVISSCSNDDFKALVLEYMSNGSL 781
+ + + +D+ ++ E+MS G L
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGEL 135
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHR 754
+NF + IG G +G VY AR + G +A+K + + E +LK++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 755 NLIKVISSCSNDDFKALVLEYMSN 778
N++K++ ++ LV E++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ 85
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 698 DNFAENNIIGRGGFGSVYG-ARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNL 756
D++ + +G G FG V+ G A K S ++ E + + +RH L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 757 IKVISSCSNDDFKALVLEYMSNGSL 781
+ + + +D+ ++ E+MS G L
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGEL 241
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D + +G G F V R + G++ A K ++ + + E E +LK+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
I+H N+I + N L+LE ++ G L D+L
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 706 IGRGGFGSVYGA-RLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLIKVISSCS 764
+G G +GSVY A E G +AIK S L+ E ++++ +++K S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIK--QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 765 NDDFKALVLEYMSNGSLGDWLHSSN 789
+ +V+EY GS+ D + N
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRN 119
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D + +G G F V R + G++ A K ++ + + E E +LK+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
I+H N+I + N L+LE ++ G L D+L
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D + +G G F V R + G++ A K ++ + + E E +LK+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
I+H N+I + N L+LE ++ G L D+L
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 697 TDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALKSFEA---ECEVLKKIR 752
+D + ++G+G FG V + + G + A+KV ++ E+ E ++LK++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSNGSLGD 783
H N+ K+ + + LV E + G L D
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFD 115
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D + +G G F V R + G++ A K ++ + + E E +LK+
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
I+H N+I + N L+LE ++ G L D+L
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 115
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D + +G G F V R + G++ A K ++ + + E E +LK+
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
I+H N+I + N L+LE ++ G L D+L
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D + +G G F V R + G++ A K ++ + + E E +LK+
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
I+H N+I + N L+LE ++ G L D+L
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D + +G G F V R + G++ A K ++ + + E E +LK+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
I+H N+I + N L+LE ++ G L D+L
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRN 755
D++ +IG G V A K+AIK + ++C +++ E + + + H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGD 783
++ +S D LV++ +S GS+ D
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLD 97
>pdb|1T4B|A Chain A, 1.6 Angstrom Structure Of Esherichia Coli Aspartate-
Semialdehyde Dehydrogenase.
pdb|1T4B|B Chain B, 1.6 Angstrom Structure Of Esherichia Coli Aspartate-
Semialdehyde Dehydrogenase.
pdb|1T4D|A Chain A, Crystal Structure Of Escherichia Coli Aspartate
Beta-Semialdehyde Dehydrogenase (Ecasadh), At 1.95
Angstrom Resolution
pdb|1T4D|B Chain B, Crystal Structure Of Escherichia Coli Aspartate
Beta-Semialdehyde Dehydrogenase (Ecasadh), At 1.95
Angstrom Resolution
pdb|1T4D|C Chain C, Crystal Structure Of Escherichia Coli Aspartate
Beta-Semialdehyde Dehydrogenase (Ecasadh), At 1.95
Angstrom Resolution
Length = 367
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 254 DLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNL 308
D+S+PTVE L+ A N + +P N ++T+ EL +G + +G LR L
Sbjct: 285 DVSIPTVEELLAAHNPWAKVVP----NDREITMRELTPAAVTGTLTTPVGRLRKL 335
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 500 IGNLKVLLGINLSENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNL 559
+ NL LL LS N+L+ + +L+++DL+ N L F DL +LEVL L
Sbjct: 63 LTNLHSLL---LSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119
Query: 560 SKNKISGSIPKSMEKLFYLRELNLSFNEL 588
N I + E + L++L LS N++
Sbjct: 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQI 148
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 70 PSQLGNLSSLTILNLSHNKLSGSVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVD 129
P++L NL SL LSHN L+ + + L++LD + N L ++ F+F+ ++
Sbjct: 60 PTRLTNLHSLL---LSHNHLNFISSEAFVPVPNLRYLDLSSNHLH-TLDEFLFSDLQALE 115
Query: 130 IRLTNNRLSGELPKNICNYLPHLKALFLDKNMFHGKIPSALSK 172
+ L N + +N + L+ L+L +N + P L K
Sbjct: 116 VLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQI-SRFPVELIK 157
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIKV 729
++G+GGFG+V+ G RL D +++AIKV
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKV 63
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D + +G G F V R + G++ A K ++ + + E E +LK+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
I+H N+I + N L+LE ++ G L D+L
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|1BRM|A Chain A, Aspartate Beta-Semialdehyde Dehydrogenase From Escherichia
Coli
pdb|1BRM|B Chain B, Aspartate Beta-Semialdehyde Dehydrogenase From Escherichia
Coli
pdb|1BRM|C Chain C, Aspartate Beta-Semialdehyde Dehydrogenase From Escherichia
Coli
pdb|1GL3|B Chain B, Aspartate Beta-Semialdehyde Dehydrogenase In Complex With
Nadp And Substrate Analogue S-Methyl Cysteine Sulfoxide
pdb|1GL3|A Chain A, Aspartate Beta-Semialdehyde Dehydrogenase In Complex With
Nadp And Substrate Analogue S-Methyl Cysteine Sulfoxide
Length = 367
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 254 DLSLPTVEVLILALNRFFGTIPSSITNASKLTVLELGGNTFSGLIPDTIGNLRNL 308
D+S+PTVE L+ A N + +P N ++T+ EL +G + +G LR L
Sbjct: 285 DVSIPTVEELLAAHNPWAKVVP----NDREITMRELTPAAVTGTLTTPVGRLRKL 335
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D + +G G F V R + G++ A K ++ + + E E +LK+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
I+H N+I + N L+LE ++ G L D+L
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 695 QATDNFAE-NNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECE 746
Q ++F + +G G F V R + G++ A K ++ + A + E E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 747 VLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
+L+++ H N+I + N L+LE +S G L D+L
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 149
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 695 QATDNFAE-NNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECE 746
Q ++F + +G G F V R + G++ A K ++ + A + E E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 747 VLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
+L+++ H N+I + N L+LE +S G L D+L
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 706 IGRGGFGSVYGARLED-GMKIAIKVF-HQQCASALKSFE-AECEVLKKIRHRNLIKVISS 762
IG G +G V+ R D G +AIK F + +K E +LK+++H NL+ ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
LV EY + L +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHE 91
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 695 QATDNFAE-NNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECE 746
Q ++F + +G G F V R + G++ A K ++ + A + E E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 747 VLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
+L+++ H N+I + N L+LE +S G L D+L
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGARLEDGMK------IAIKVFHQQCASALK-SFEAECEVLKKIRHRNLIK 758
+G+G FG VY D +K +A+K ++ + + F E V+K ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 759 VISSCSNDDFKALVLEYMSNGSLGDWLHS 787
++ S +V+E M++G L +L S
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 699 NFAENNIIGRGGFG-SVYGARLEDGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLI 757
+ ++G+G FG ++ E G + +K + ++F E +V++ + H N++
Sbjct: 11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVL 70
Query: 758 KVISSCSNDDFKALVLEYMSNGSL 781
K I D + EY+ G+L
Sbjct: 71 KFIGVLYKDKRLNFITEYIKGGTL 94
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 695 QATDNFAE-NNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECE 746
Q ++F + +G G F V R + G++ A K ++ + A + E E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 747 VLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
+L+++ H N+I + N L+LE +S G L D+L
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 149
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRN 755
D++ +IG G V A K+AIK + ++C +++ E + + + H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGD 783
++ +S D LV++ +S GS+ D
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLD 102
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 129
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGARLEDGMK------IAIKVFHQQCASALK-SFEAECEVLKKIRHRNLIK 758
+G+G FG VY D +K +A+K ++ + + F E V+K ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 759 VISSCSNDDFKALVLEYMSNGSLGDWLHS 787
++ S +V+E M++G L +L S
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D + +G G F V R + G++ A K ++ + + E E +LK+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
I+H N+I + N L+LE ++ G L D+L
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D + +G G F V R + G++ A K ++ + + E E +LK+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
I+H N+I + N L+LE ++ G L D+L
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 699 NFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALKSFEAECEVLKKIRHRNLI 757
+F E +IG GGFG V+ A+ DG I+ A E E + L K+ H N++
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLDHVNIV 68
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 123
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 695 QATDNFAE-NNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECE 746
Q ++F + +G G F V R + G++ A K ++ + A + E E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 747 VLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
+L+++ H N+I + N L+LE +S G L D+L
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 703 NNIIGRGGFGSVY-GARLEDG-------MKIAIKVFHQQCASALKSFEAECEVLKKIRHR 754
N +G+G F ++ G R E G ++ +KV + + +SF ++ K+ H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 755 NLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
+L+ C D LV E++ GSL +L
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYL 103
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGARLEDGMK------IAIKVFHQQCASALK-SFEAECEVLKKIRHRNLIK 758
+G+G FG VY D +K +A+K ++ + + F E V+K ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 759 VISSCSNDDFKALVLEYMSNGSLGDWLHS 787
++ S +V+E M++G L +L S
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 114
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGARLEDGMK------IAIKVFHQQCASALK-SFEAECEVLKKIRHRNLIK 758
+G+G FG VY D +K +A+K ++ + + F E V+K ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 759 VISSCSNDDFKALVLEYMSNGSLGDWLHS 787
++ S +V+E M++G L +L S
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGARLEDGMK------IAIKVFHQQCASALK-SFEAECEVLKKIRHRNLIK 758
+G+G FG VY D +K +A+K ++ + + F E V+K ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 759 VISSCSNDDFKALVLEYMSNGSLGDWLHS 787
++ S +V+E M++G L +L S
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 693 LLQATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKV---FHQQCASALKSFEAECEVL 748
L +++ +IGRG FG V R + K+ A+K+ F S F E +++
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 749 KKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
++++ + +D + +V+EYM G L
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDL 162
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 703 NNIIGRGGFGSVYGARLE----DGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLI 757
+IG G FG V RL+ + +AIK + F E ++ + H N++
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 758 KVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
+ + +V+E+M NG+L +L +
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHD 139
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGARLEDGMK------IAIKVFHQQCASALK-SFEAECEVLKKIRHRNLIK 758
+G+G FG VY D +K +A+K ++ + + F E V+K ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 759 VISSCSNDDFKALVLEYMSNGSLGDWLHS 787
++ S +V+E M++G L +L S
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA---ECEVLKKIRH 753
D F +G G FG V + E G A+K+ +Q LK E E +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
L+K+ S ++ +V+EY++ G +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 74/176 (42%), Gaps = 33/176 (18%)
Query: 332 ANCKKLRSLKLAGNPLDGFLPSSIGNLSK--SLETLVIANCSISGNIPQAISNLSNLLTL 389
AN L L ++ N + S I L+K +LE+L+ N IS P I L+NL L
Sbjct: 170 ANLTTLERLDISSNKV-----SDISVLAKLTNLESLIATNNQISDITPLGI--LTNLDEL 222
Query: 390 VLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIP 449
L N+L I T L L L LA+N + P L + +L EL L N+ S P
Sbjct: 223 SLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 278
Query: 450 --------------------SCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFF 485
S +SNL +L YL L N + + P + + LFF
Sbjct: 279 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 334
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 74/176 (42%), Gaps = 33/176 (18%)
Query: 332 ANCKKLRSLKLAGNPLDGFLPSSIGNLSK--SLETLVIANCSISGNIPQAISNLSNLLTL 389
AN L L ++ N + S I L+K +LE+L+ N IS P I L+NL L
Sbjct: 169 ANLTTLERLDISSNKV-----SDISVLAKLTNLESLIATNNQISDITPLGI--LTNLDEL 221
Query: 390 VLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIP 449
L N+L I T L L L LA+N + P L + +L EL L N+ S P
Sbjct: 222 SLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 277
Query: 450 --------------------SCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFF 485
S +SNL +L YL L N + + P + + LFF
Sbjct: 278 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 333
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGARLEDGMK------IAIKVFHQQCASALK-SFEAECEVLKKIRHRNLIK 758
+G+G FG VY D +K +A+K ++ + + F E V+K ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 759 VISSCSNDDFKALVLEYMSNGSLGDWLHS 787
++ S +V+E M++G L +L S
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 110
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEA--ECEVLKKIRHRN 755
+ + + +G G +G VY A+ G +A+K A E +LK++ H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 756 LIKVISSCSNDDFKALVLEYMSN 778
++ +I ++ LV E+M
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEK 103
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 706 IGRGGFGSVYGARLEDGMK------IAIKVFHQQCASALK-SFEAECEVLKKIRHRNLIK 758
+G+G FG VY D +K +A+K ++ + + F E V+K ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 759 VISSCSNDDFKALVLEYMSNGSLGDWLHS 787
++ S +V+E M++G L +L S
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 112
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 10 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+++ M G L D++ H N
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDN 114
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 698 DNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEA--ECEVLKKIRHRN 755
+ + + +G G +G VY A+ G +A+K A E +LK++ H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 756 LIKVISSCSNDDFKALVLEYMSN 778
++ +I ++ LV E+M
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEK 103
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 14/116 (12%)
Query: 688 FSYLELLQATDNFAEN---------NIIGRGGFGSVYGARLEDGMK----IAIKVFHQ-Q 733
F++ + +A FA+ +IG G FG V L+ K +AIK
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 734 CASALKSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
+ F +E ++ + H N+I + + ++ E+M NGSL +L ++
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND 129
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D + +G G F V R + G++ A K ++ + + E E +LK+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
I+H N+I + N L+LE ++ G L D+L
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 13 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+++ M G L D++ H N
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN 117
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 698 DNFAENNIIGRGGFGSVYGARL-EDGMKIAIKVFHQQCASALKSFEAECEVLKK------ 750
DNF ++G+G FG V AR+ E G A+KV + L+ + EC + +K
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV--ILQDDDVECTMTEKRILSLA 80
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
H L ++ D V+E+++ G L
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL 111
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+++ M G L D++ H N
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN 116
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 694 LQATDNFAENNIIGRGGFG-SVYGARLEDGMKIAIKVFHQQCASALKSFEA--ECEVLKK 750
Q+ + + IG G FG ++ EDG + IK + S+ + E+ E VL
Sbjct: 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
++H N+++ S + +V++Y G L
Sbjct: 80 MKHPNIVQYRESFEENGSLYIVMDYCEGGDL 110
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Query: 698 DNFAENNIIGRGGFGSVYGA-RLEDGMKIAIKVF---HQQ---CASALKSFEAECEVLKK 750
D + +G G +G VY A +AIK H++ +A++ E +LK+
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR----EVSLLKE 89
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSN 778
++HRN+I++ S ++ L+ EY N
Sbjct: 90 LQHRNIIELKSVIHHNHRLHLIFEYAEN 117
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 687 RFSYLELLQATDN-FAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEA-- 743
++ +LE T N F + ++G+GGFG V ++ K+ ++ + EA
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 744 --ECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
E ++L+K+ R ++ + + D LVL M+ G L
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDL 271
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D + +G G F V R + G++ A K ++ + + E E +LK+
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
I+H N+I + N L+LE ++ G L D+L
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 10 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+++ M G L D++ H N
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN 114
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 706 IGRGGFGSVYGA-RLEDGMKIAIKVFHQQCASAL--KSFEAECEVLKKIRHRNLIKVISS 762
+G G +G+V A G K+AIK ++ S L K E +LK +RH N+I ++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 763 CSNDD 767
+ D+
Sbjct: 93 FTPDE 97
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+++ M G L D++ H N
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN 115
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 13 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+++ M G L D++ H N
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN 117
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 74/176 (42%), Gaps = 33/176 (18%)
Query: 332 ANCKKLRSLKLAGNPLDGFLPSSIGNLSK--SLETLVIANCSISGNIPQAISNLSNLLTL 389
AN L L ++ N + S I L+K +LE+L+ N IS P I L+NL L
Sbjct: 173 ANLTTLERLDISSNKV-----SDISVLAKLTNLESLIATNNQISDITPLGI--LTNLDEL 225
Query: 390 VLERNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIP 449
L N+L I T L L L LA+N + P L + +L EL L N+ S P
Sbjct: 226 SLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 281
Query: 450 --------------------SCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFF 485
S +SNL +L YL L N + + P + + LFF
Sbjct: 282 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 337
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+++ M G L D++ H N
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN 113
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 703 NNIIGRGGFGSVY-GARLEDG-------MKIAIKVFHQQCASALKSFEAECEVLKKIRHR 754
N +G+G F ++ G R E G ++ +KV + + +SF ++ K+ H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 755 NLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
+L+ C D LV E++ GSL +L
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYL 103
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 14/110 (12%)
Query: 527 LKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSM-EKLFYLRELNLSF 585
+++L ++L N E P F DL +LE + NK+ +P+ + K+ L++LNL+
Sbjct: 146 MRNLSHLELRANIEEMP-SHLFDDLENLESIEFGSNKLR-QMPRGIFGKMPKLKQLNLAS 203
Query: 586 NELEGEIPSGGIFANFTAESFMGNELLCGLPNLQVQPCKVSKPRTEHKSR 635
N+L+ +P GIF T+ + L P S PR ++ SR
Sbjct: 204 NQLKS-VPD-GIFDRLTSLQKIW---------LHTNPWDCSCPRIDYLSR 242
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 687 RFSYLELLQATDN-FAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKSFEA-- 743
++ +LE T N F + ++G+GGFG V ++ K+ ++ + EA
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 744 --ECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
E ++L+K+ R ++ + + D LVL M+ G L
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDL 271
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+++ M G L D++ H N
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN 115
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 703 NNIIGRGGFGSVYGARLEDGMK----IAIKVFHQ-QCASALKSFEAECEVLKKIRHRNLI 757
+IG G FG V L+ K +AIK + F +E ++ + H N+I
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 758 KVISSCSNDDFKALVLEYMSNGSLGDWLHSSN 789
+ + ++ E+M NGSL +L ++
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQND 103
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 683 ATLRRFSYLELLQATDNFAENNIIGRGGFGSVYG-ARLEDGMKIAIKVFHQQCASAL--K 739
AT RF TD++ +G+G F V + + A K+ + + SA +
Sbjct: 24 ATCTRF--------TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ 75
Query: 740 SFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
E E + + ++H N++++ S S + F LV + ++ G L
Sbjct: 76 KLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL 117
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+++ M G L D++ H N
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN 115
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 695 QATDNFAE-NNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECE 746
Q ++F + +G G F V R + G++ A K ++ + A + E E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 747 VLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
+L+++ H N+I + N L+LE +S G L D+L
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL 106
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 706 IGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA--ECEVLKKIRHRNLIKVISS 762
IG+G FG V+ AR + G K+A+K + A E ++L+ ++H N++ +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 763 C 763
C
Sbjct: 86 C 86
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 695 QATDNFAENNIIGRGGFGSVYGA-RLEDGMKIAIKVFHQQ-----CA---SALKSFEAEC 745
+ + ++ + +G G FG V+ A E ++ +K ++ C L E
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 746 EVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNG 779
+L ++ H N+IKV+ N F LV+E +G
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG 114
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 679 LSSQATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASAL 738
L S+ T+ F YL+LL F + ++ G Y ++ +K + V + A L
Sbjct: 1 LGSRVTMNEFEYLKLL-GKGTFGKVILVKEKATGRYYAMKI---LKKEVIVAKDEVAHTL 56
Query: 739 KSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
E VL+ RH L + S D V+EY + G L
Sbjct: 57 ----TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL 95
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 693 LLQATDNFAENNIIGRGGFGSVYGARLEDGMKI--AIKVFH-----QQCASALKSFEAEC 745
LL+ + IG+G +G V A +E+ + AIK+ + Q ++ + E
Sbjct: 21 LLELQKKYHLKGAIGQGSYGVVRVA-IENQTRAIRAIKIMNKNKIRQINPKDVERIKTEV 79
Query: 746 EVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
++KK+ H N+ ++ ++ + LV+E G L D L
Sbjct: 80 RLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKL 119
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 332 ANCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVL 391
AN + L+SLK+ +PL P +I +L K LE L + C+ N P + L L+L
Sbjct: 203 ANLQNLKSLKIRNSPLSALGP-AIHHLPK-LEELDLRGCTALRNYPPIFGGRAPLKRLIL 260
Query: 392 E--RNKLTGPISITFGRLQKLQGLYL 415
+ N LT P+ I RL +L+ L L
Sbjct: 261 KDCSNLLTLPLDI--HRLTQLEKLDL 284
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 706 IGRGGFGSVY-GARLEDGMKIAIKVFHQQ--CASALKSFEAECEVLKKIRHRNLIKVI-- 760
IGRG F +VY G E +++A + S + F+ E E LK ++H N+++
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 761 --SSCSNDDFKALVLEYMSNGSLGDWL 785
S+ LV E ++G+L +L
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYL 120
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 705 IIGRGGFGSVYGARLE-DGMKIAIKVFHQQC---ASALKSFEAECEVL-KKIRHRNLIKV 759
+IG+G FG V AR + + + A+KV ++ K +E VL K ++H L+ +
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 760 ISSCSNDDFKALVLEYMSNGSL 781
S D VL+Y++ G L
Sbjct: 105 HFSFQTADKLYFVLDYINGGEL 126
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 685 LRRFSY-LELLQATDNFAENNIIGRGGFGSV-----YG-ARLEDGMKIAIKVFHQQC-AS 736
R + Y L+ +N ++G G FG V YG ++ +++A+K+ ++ +S
Sbjct: 31 FREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSS 90
Query: 737 ALKSFEAECEVLKKI-RHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
++ +E +++ ++ H N++ ++ +C+ L+ EY G L ++L S
Sbjct: 91 EREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRS 142
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 706 IGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA--ECEVLKKIRHRNLIKVISS 762
IG+G FG V+ AR + G K+A+K + A E ++L+ ++H N++ +I
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 763 C 763
C
Sbjct: 85 C 85
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 706 IGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA--ECEVLKKIRHRNLIKVISS 762
IG+G FG V+ AR + G K+A+K + A E ++L+ ++H N++ +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 763 C 763
C
Sbjct: 86 C 86
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHR 754
+NF + IG G +G VY AR + G +A+ + + E +LK++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 755 NLIKVISSCSNDDFKALVLEYMSN 778
N++K++ ++ LV E++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 698 DNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFH--QQCASALKSFEAECEVLKKIRHR 754
+NF + IG G +G VY AR + G +A+ + + E +LK++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 755 NLIKVISSCSNDDFKALVLEYMSN 778
N++K++ ++ LV E++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 706 IGRGGFGSVYGAR-LEDGMKIAIKVFHQQCASALKSFEA--ECEVLKKIRHRNLIKVISS 762
IG+G FG V+ AR + G K+A+K + A E ++L+ ++H N++ +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 763 C 763
C
Sbjct: 86 C 86
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+K+ + +D+ L Y NG L ++
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK 103
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 706 IGRGGFGSV-YGARLEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRHRNLIKVIS 761
+G G FG V + K+A+K +Q + E E LK +RH ++IK+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 762 SCSNDDFKALVLEYMSNGSLGDWL 785
+ +V+EY + G L D++
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYI 99
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 700 FAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQC--ASALK----SFEAECEVLKKIRH 753
F +G G F V A K K+F +C ALK S E E VL+KI+H
Sbjct: 24 FEFKETLGTGAFSEVVLAE----EKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKH 79
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSLGD 783
N++ + + + LV++ +S G L D
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFD 109
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIK 67
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIK 68
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIK 82
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIK 68
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIK 67
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 699 NFAENNI-----IGRGGFGSV-----YGARLEDG-MKIAIKVFHQQC-ASALKSFEAECE 746
F NN+ +G G FG V +G ED +K+A+K+ A ++ +E +
Sbjct: 27 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 86
Query: 747 VLKKI-RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
++ + +H N++ ++ +C++ ++ EY G L
Sbjct: 87 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIK 68
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+K+ + +D+ L Y NG L ++
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK 100
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIK 82
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIK 67
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIK 68
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASALKSF------EAECEVLKKIR--HRN 755
++G GGFGSVY G R+ D + +AIK + S E +LKK+
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 756 LIKVISSCSNDDFKALVLEYMS 777
+I+++ D L+LE M
Sbjct: 75 VIRLLDWFERPDSFVLILERME 96
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIK 54
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIK 54
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIK 67
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIK 40
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 16/107 (14%)
Query: 679 LSSQATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASA 737
+ + T+ F YL+LL G+G FG V R + G A+K+ ++ A
Sbjct: 3 MDPKVTMNDFDYLKLL------------GKGTFGKVILVREKATGRYYAMKILRKEVIIA 50
Query: 738 LKSFE---AECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
E VL+ RH L + + D V+EY + G L
Sbjct: 51 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL 97
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+K+ + +D+ L Y NG L ++
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK 102
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSLGDWLHS 787
+K+ + +D+ L Y NG L ++
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK 101
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIK 87
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIK 55
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIK 38
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDN 113
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIK 39
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIK 40
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 68/164 (41%), Gaps = 26/164 (15%)
Query: 448 IPSCVSNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSFDIGNLKVLL 507
+ V LT LR Y G++ F W ++ +++ + L +D NLK L
Sbjct: 198 VSKAVXRLTKLRQFYXGNSPFVAENICEAWENENS---EYAQQYKTEDLKWD--NLKDLT 252
Query: 508 GINLSENNLSGDMPATIGGLKDLQFMDLAYNR--------------LEGPIPESFGDLTS 553
+ + +P + L + Q +++A NR + P+ E
Sbjct: 253 DVEVYNCPNLTKLPTFLKALPEXQLINVACNRGISGEQLKDDWQALADAPVGEK------ 306
Query: 554 LEVLNLSKNKISG-SIPKSMEKLFYLRELNLSFNELEGEIPSGG 596
++++ + N + + S++K L L +N+LEG++P+ G
Sbjct: 307 IQIIYIGYNNLKTFPVETSLQKXKKLGXLECLYNQLEGKLPAFG 350
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIK 40
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIK 55
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIK 55
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
+K+ + +D+ L Y NG L ++
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 120
>pdb|2WQX|A Chain A, Inlb321_4r: S199r, D200r, G206r, A227r, C242a Mutant Of
The Listeria Monocytogenes Inlb Internalin Domain
pdb|2WQX|B Chain B, Inlb321_4r: S199r, D200r, G206r, A227r, C242a Mutant Of
The Listeria Monocytogenes Inlb Internalin Domain
Length = 289
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 361 SLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNL 420
LE+L + N I+ +S L+ L TL LE N++ + + RL KLQ LYL+ N++
Sbjct: 133 QLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQIRRIVPL--ARLTKLQNLYLSKNHI 188
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
+K+ + +D+ L Y NG L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL 119
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIK 35
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
+K+ + +D+ L Y NG L ++
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 123
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIK 74
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIK 35
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIK 35
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
+K+ + +D+ L Y NG L ++
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 120
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
+K+ + +D+ L Y NG L
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGEL 120
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 16/105 (15%)
Query: 681 SQATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALK 739
++ T+ F YL+LL G+G FG V R + G A+K+ ++ A
Sbjct: 3 AKVTMNDFDYLKLL------------GKGTFGKVILVREKATGRYYAMKILRKEVIIAKD 50
Query: 740 SFE---AECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
E VL+ RH L + + D V+EY + G L
Sbjct: 51 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL 95
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
+K+ + +D+ L Y NG L ++
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 121
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 697 TDNFAENNIIGRGGFGSVYGARLEDGMK-IAIKVFHQQCASALKSFEAECEVLKKIRHRN 755
+D F + +GRG VY + + K A+KV + K E VL ++ H N
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPN 109
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGDWLHSSNY 790
+IK+ +LVLE ++ G L D + Y
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY 144
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
+K+ + +D+ L Y NG L
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGEL 120
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
+K+ + +D+ L Y NG L
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGEL 122
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
+K+ + +D+ L Y NG L ++
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 121
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
+K+ + +D+ L Y NG L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL 119
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 116
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 34 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 92
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 93 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 138
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 113
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 116
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
+K+ + +D+ L Y NG L ++
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 121
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 705 IIGRGGFGSVY-GARLEDGMKIAIK 728
++G GGFGSVY G R+ D + +AIK
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIK 62
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 6 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 64
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 65 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 110
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 115
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
+K+ + +D+ L Y NG L ++
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 105
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 3 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 61
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 107
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 19 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 77
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 78 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 123
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 120
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
+K+ + +D+ L Y NG L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL 119
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 116
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 698 DNFAENNIIGRGGFGSVYGARLEDGMK-IAIKVFHQQCASALK-SFEAECEVLKKIRHRN 755
D + +++G G F V A + K +AIK ++ + S E E VL KI+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGD 783
++ + + L+++ +S G L D
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFD 105
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 15 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 73
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 74 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 119
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKV--FHQQCASALKSFEAECEVLKKIRHRNLIKVISSC 763
IG G +G VY A+ G A+K ++ + E +LK+++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 764 SNDDFKALVLEYMSN 778
LV E++
Sbjct: 70 HTKKRLVLVFEHLDQ 84
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
+K+ + +D+ L Y NG L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL 119
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 113
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 699 NFAENNI-----IGRGGFGSV-----YGARLEDG-MKIAIKVFHQQC-ASALKSFEAECE 746
F NN+ +G G FG V +G ED +K+A+K+ A ++ +E +
Sbjct: 34 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 93
Query: 747 VLKKI-RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
++ + +H N++ ++ +C++ ++ EY G L
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 73 RREGNIQYLFLEYCSGGELFD 93
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKV--FHQQCASALKSFEAECEVLKKIRHRNLIKVISSC 763
IG G +G VY A+ G A+K ++ + E +LK+++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 764 SNDDFKALVLEYMSN 778
LV E++
Sbjct: 70 HTKKRLVLVFEHLDQ 84
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 74 RREGNIQYLFLEYCSGGELFD 94
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 120
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 50/97 (51%), Gaps = 14/97 (14%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVYGARLEDGMKIA----IKVFHQQCA------SALKS 740
L++ + + + +G G F +VY AR ++ +I IK+ H+ A +AL+
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR- 61
Query: 741 FEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMS 777
E ++L+++ H N+I ++ + + +LV ++M
Sbjct: 62 ---EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME 95
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 698 DNFAENNIIGRGGFGSVYGA-RLEDGMKIAIKV-----FHQQCASALKSFEAECEVLKKI 751
D + +IG+G F V E G + A+K+ F + + + E + +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
+H ++++++ + S+D +V E+M L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADL 113
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 699 NFAENNI-----IGRGGFGSV-----YGARLEDG-MKIAIKVFHQQC-ASALKSFEAECE 746
F NN+ +G G FG V +G ED +K+A+K+ A ++ +E +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 747 VLKKI-RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
++ + +H N++ ++ +C++ ++ EY G L
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 706 IGRGGFGSVYGARLEDGMKIAIKV--FHQQCASALKSFEAECEVLKKIRHRNLIKVISSC 763
IG G +G VY A+ G A+K ++ + E +LK+++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 764 SNDDFKALVLEYMSN 778
LV E++
Sbjct: 70 HTKKRLVLVFEHLDQ 84
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 73 RREGNIQYLFLEYCSGGELFD 93
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 113
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 698 DNFAENNIIGRGGFGSVYGARLEDGMK-IAIKVFHQQCASALK-SFEAECEVLKKIRHRN 755
D + +++G G F V A + K +AIK ++ + S E E VL KI+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGD 783
++ + + L+++ +S G L D
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFD 105
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V + A K E
Sbjct: 43 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDE 101
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 102 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 147
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 699 NFAENNI-----IGRGGFGSV-----YGARLEDG-MKIAIKVFHQQC-ASALKSFEAECE 746
F NN+ +G G FG V +G ED +K+A+K+ A ++ +E +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 747 VLKKI-RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
++ + +H N++ ++ +C++ ++ EY G L
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 699 NFAENNI-----IGRGGFGSV-----YGARLEDG-MKIAIKVFHQQC-ASALKSFEAECE 746
F NN+ +G G FG V +G ED +K+A+K+ A ++ +E +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 747 VLKKI-RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
++ + +H N++ ++ +C++ ++ EY G L
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 691 LELLQATDNFAENNIIGRGGFGSVY-GARLEDGMKIAIKVFHQQCASAL-----KSFEAE 744
L +L+ T+ F + ++G G FG+VY G + +G K+ I V ++ A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 745 CEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL--HSSN 789
V+ + + ++ +++ C + L+ + M G L D++ H N
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 115
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 698 DNFAENNIIGRGGFGSVYGARLEDGMK-IAIKVFHQQCASALK-SFEAECEVLKKIRHRN 755
D + +++G G F V A + K +AIK ++ + S E E VL KI+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGD 783
++ + + L+++ +S G L D
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFD 105
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
+K+ + +D+ L Y NG L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCL 119
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 16/104 (15%)
Query: 682 QATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALKS 740
+ T+ F YL+LL G+G FG V R + G A+K+ ++ A
Sbjct: 1 KVTMNDFDYLKLL------------GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE 48
Query: 741 FE---AECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
E VL+ RH L + + D V+EY + G L
Sbjct: 49 VAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL 92
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 16/104 (15%)
Query: 682 QATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALKS 740
+ T+ F YL+LL G+G FG V R + G A+K+ ++ A
Sbjct: 1 KVTMNDFDYLKLL------------GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE 48
Query: 741 FE---AECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
E VL+ RH L + + D V+EY + G L
Sbjct: 49 VAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL 92
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 688 FSYLELLQATDNFAENNIIGRGGFGSVYGARLEDGMK-IAIKVFHQQCASAL--KSFEAE 744
F ++ + DN+ ++IGRG +G VY A ++ K +AIK ++ + K E
Sbjct: 16 FQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILRE 75
Query: 745 CEVLKKIRHRNLIKVISSCSNDD 767
+L +++ +I++ DD
Sbjct: 76 ITILNRLKSDYIIRLYDLIIPDD 98
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 16/104 (15%)
Query: 682 QATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALKS 740
+ T+ F YL+LL G+G FG V R + G A+K+ ++ A
Sbjct: 1 KVTMNDFDYLKLL------------GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE 48
Query: 741 FE---AECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
E VL+ RH L + + D V+EY + G L
Sbjct: 49 VAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL 92
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 16/104 (15%)
Query: 682 QATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALKS 740
+ T+ F YL+LL G+G FG V R + G A+K+ ++ A
Sbjct: 1 KVTMNDFDYLKLL------------GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE 48
Query: 741 FE---AECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
E VL+ RH L + + D V+EY + G L
Sbjct: 49 VAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL 92
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 698 DNFAENNIIGRGGFGSVYGARLEDGMK-IAIKVFHQQCASALK-SFEAECEVLKKIRHRN 755
D + +++G G F V A + K +AIK ++ + S E E VL KI+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN 77
Query: 756 LIKVISSCSNDDFKALVLEYMSNGSLGD 783
++ + + L+++ +S G L D
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFD 105
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 699 NFAENNI-----IGRGGFGSV-----YGARLEDG-MKIAIKVFHQQC-ASALKSFEAECE 746
F NN+ +G G FG V +G ED +K+A+K+ A ++ +E +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 747 VLKKI-RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
++ + +H N++ ++ +C++ ++ EY G L
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 531 QFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKLFYLRELNLSFNELEG 590
Q + L NR+ P F LT L L+L N+++ +KL L +L+L+ N+L+
Sbjct: 33 QVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK- 91
Query: 591 EIPSGG 596
IP G
Sbjct: 92 SIPRGA 97
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 18/238 (7%)
Query: 333 NCKKLRSLKLAGNPLDGFLPSSIGNLSKSLETLVIANCSISGNIPQAISNLSNLLTLVLE 392
N LR L L + + P + NL+K + AN ++S P + N LT+
Sbjct: 108 NLTNLRELYLNEDNISDISP--LANLTKXYSLNLGANHNLSDLSPLSNXTGLNYLTVTES 165
Query: 393 RNKLTGPISITFGRLQKLQGLYLASNNLVGSFPDELCHIGRLAELALLDNRHSGSIPSCV 452
+ K PI+ L L L L N + P L + L N+ + P V
Sbjct: 166 KVKDVTPIA----NLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--V 217
Query: 453 SNLTSLRYLYLGSNRFTFVIPSTFWSLKDILFFDFSSNFLVGTLSF-DIGNLKVLLGINL 511
+N T L L +G+N+ T + P +L + + + +N + + D+ LK L N+
Sbjct: 218 ANXTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDINAVKDLTKLKXL---NV 272
Query: 512 SENNLSGDMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIP 569
N +S D+ + + L L + L N+L E G LT+L L LS+N I+ P
Sbjct: 273 GSNQIS-DI-SVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP 328
>pdb|3G5Y|A Chain A, Antibodies Specifically Targeting A Locally Misfolded
Region Of Tumor Associated Egfr
Length = 213
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 15/99 (15%)
Query: 519 DMPATIGGLKDLQFMDLAYNRLEGPIPESFGDLTSLEVLNLSKNKISGSIPKSMEKL--- 575
D TI L F+D Y G P +FG TSLE+ P S E+L
Sbjct: 70 DYSLTISSLSSEDFVDY-YCVQYGQFPWTFGGGTSLEIKRADAAPTVSIFPPSTEQLTSG 128
Query: 576 ----------FYLRELNLSFNELEGEIPSGGIFANFTAE 604
FY +++N+ + +++G G+ ++T +
Sbjct: 129 GASVVCFLNNFYPKDINVKW-KIDGSERQNGVLNSWTDQ 166
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 16/104 (15%)
Query: 682 QATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLE-DGMKIAIKVFHQQCASALKS 740
+ T+ F YL+LL G+G FG V R + G A+K+ ++ A
Sbjct: 1 KVTMNDFDYLKLL------------GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE 48
Query: 741 FE---AECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
E VL+ RH L + + D V+EY + G L
Sbjct: 49 VAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL 92
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 698 DNFAENNIIGRGGFGSVYGA-RLEDGMKIAIKV-----FHQQCASALKSFEAECEVLKKI 751
D + +IG+G F V E G + A+K+ F + + + E + +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
+H ++++++ + S+D +V E+M L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADL 113
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 698 DNFAENNIIGRGGFGSVYGA-RLEDGMKIAIKV-----FHQQCASALKSFEAECEVLKKI 751
D + +IG+G F V E G + A+K+ F + + + E + +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 752 RHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
+H ++++++ + S+D +V E+M L
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADL 115
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 698 DNFAENNIIGRGGFGSVYGARLED-GMKIAIKVFHQQCASALK------SFEAECEVLKK 750
D + +G G F V R + G++ A K ++ + + E E +LK+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 751 IRHRNLIKVISSCSNDDFKALVLEYMSNGSLGDWL 785
I+H N+I + N L+ E ++ G L D+L
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFL 105
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 698 DNFAENNIIGRGGFGSVYGAR-LEDGMKIAIKVFHQQC---ASALKSFEAECEVLKKIRH 753
++F I+G G F +V AR L + AIK+ ++ + + E +V+ ++ H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 754 RNLIKVISSCSNDDFKALVLEYMSNGSL 781
+K+ +D+ L Y NG L
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGEL 124
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 8/103 (7%)
Query: 679 LSSQATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASAL 738
+ + T+ F YL+LL F + ++ G Y ++ +K + V + A L
Sbjct: 3 MDPRVTMNEFEYLKLL-GKGTFGKVILVKEKATGRYYAMKI---LKKEVIVAKDEVAHTL 58
Query: 739 KSFEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
E VL+ RH L + S D V+EY + G L
Sbjct: 59 ----TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL 97
>pdb|1M9S|A Chain A, Crystal Structure Of Internalin B (Inlb), A Listeria
Monocytogenes Virulence Protein Containing Sh3-Like
Domains
Length = 605
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Query: 361 SLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNL 420
LE+L + N I+ +S L+ L TL LE N+++ + + L KLQ LYL+ N
Sbjct: 132 QLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIVPL--AGLTKLQNLYLSKN-- 185
Query: 421 VGSFPDELCHIGRLAELALLDN 442
HI L LA L N
Sbjct: 186 ---------HISDLRALAGLKN 198
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 698 DNFAENNIIGRGGFGSVYGARLEDG--------MKIAIKVFHQQCASALKSFEAECEVLK 749
+NF ++G G +G V+ R G MK+ K Q A + E +VL+
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 750 KIRHRNLIKVISSCSNDDFK-ALVLEYMSNGSL 781
IR + + + K L+L+Y++ G L
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGEL 146
>pdb|2Y5Q|A Chain A, Listeria Monocytogenes Inlb (Internalin B) Residues 36-392
Length = 362
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Query: 361 SLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNL 420
LE+L + N I+ +S L+ L TL LE N+++ + + L KLQ LYL+ N
Sbjct: 135 QLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIVPL--AGLTKLQNLYLSKN-- 188
Query: 421 VGSFPDELCHIGRLAELALLDN 442
HI L LA L N
Sbjct: 189 ---------HISDLRALAGLKN 201
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 73 RREGNIQYLFLEYCSGGELFD 93
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 73 RREGNIQYLFLEYCSGGELFD 93
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 73 RREGNIQYLFLEYCSGGELFD 93
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 73 RREGNIQYLFLEYCSGGELFD 93
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 74 RREGNIQYLFLEYCSGGELFD 94
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 73 RREGNIQYLFLEYCSGGELFD 93
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 73 RREGNIQYLFLEYCSGGELFD 93
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 74 RREGNIQYLFLEYCSGGELFD 94
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 73 RREGNIQYLFLEYCSGGELFD 93
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 681 SQATLRRFSYLELLQATDNFAENNIIGRGGFGSVYGARLEDGMKIAIKVFHQQCASALKS 740
++ T+ F YL+LL F + ++ G Y ++ +K + V + A L
Sbjct: 4 ARVTMNEFEYLKLL-GKGTFGKVILVKEKATGRYYAMKI---LKKEVIVAKDEVAHTL-- 57
Query: 741 FEAECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
E VL+ RH L + S D V+EY + G L
Sbjct: 58 --TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL 96
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 73 RREGNIQYLFLEYCSGGELFD 93
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 13 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 72 RREGNIQYLFLEYCSGGELFD 92
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 74 RREGNIQYLFLEYCSGGELFD 94
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 74 RREGNIQYLFLEYCSGGELFD 94
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 74 RREGNIQYLFLEYCSGGELFD 94
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 74 RREGNIQYLFLEYCSGGELFD 94
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 706 IGRGGFGSVYGA--RLEDGMKIAIKVFH-QQCASALKSFEAECEVLKKIRHRNLIKVISS 762
+G G +G V A R+ + +A+K+ ++ ++ + E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 763 CSNDDFKALVLEYMSNGSLGD 783
+ + L LEY S G L D
Sbjct: 73 RREGNIQYLFLEYCSGGELFD 93
>pdb|3IZS|U Chain U, Localization Of The Large Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
pdb|3O58|T Chain T, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
Of The First 80s In The Asymmetric Unit.
pdb|3O5H|T Chain T, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
Of The Second 80s In The Asymmetric Unit.
pdb|3U5E|T Chain T, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 60s
Subunit, Ribosome A
pdb|3U5I|T Chain T, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 60s
Subunit, Ribosome B
pdb|4B6A|T Chain T, Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex
With Arx1 And Rei1
Length = 160
Score = 29.3 bits (64), Expect = 8.5, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 563 KISGSIPKSMEKLFYLRELNLSFNELEGEIPSGGIFANFTAESFMGNELLCGLPNLQVQP 622
K +GSI K M FY + + +N + + G+ N +GN L NL+V+
Sbjct: 43 KANGSIQKGMPHKFYQGKTGVVYNVTKSSV---GVIIN----KMVGNRYLEKRLNLRVEH 95
Query: 623 CKVSKPRTEHKSRKK 637
K SK R E R K
Sbjct: 96 IKHSKCRQEFLERVK 110
>pdb|2UZX|A Chain A, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Crystal Form I
pdb|2UZX|C Chain C, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Crystal Form I
pdb|2UZY|A Chain A, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Low Resolution, Crystal Form Ii
pdb|2UZY|C Chain C, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Low Resolution, Crystal Form Ii
pdb|2WQU|A Chain A, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|B Chain B, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|C Chain C, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|D Chain D, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|E Chain E, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|F Chain F, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQV|A Chain A, Internalin Domain Of Listeria Monocytogenes Inlb:
Rhombohedral Crystal Form
pdb|2WQV|B Chain B, Internalin Domain Of Listeria Monocytogenes Inlb:
Rhombohedral Crystal Form
Length = 289
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Query: 361 SLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNL 420
LE+L + N I+ +S L+ L TL LE N+++ + + L KLQ LYL+ N
Sbjct: 133 QLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIVPL--AGLTKLQNLYLSKN-- 186
Query: 421 VGSFPDELCHIGRLAELALLDN 442
HI L LA L N
Sbjct: 187 ---------HISDLRALAGLKN 199
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 13/98 (13%)
Query: 688 FSYLELLQATDNFAENNIIGRGGFGSVYGARLEDGMKI-AIKVFH-QQCAS--ALKSFEA 743
F + E+L+A IG+G FG V + D K+ A+K + Q+C +++
Sbjct: 14 FDHFEILRA---------IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 744 ECEVLKKIRHRNLIKVISSCSNDDFKALVLEYMSNGSL 781
E ++++ + H L+ + S +++ +V++ + G L
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDL 102
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 700 FAEN-NII---GRGGFGSVYGARLE-DGMKIAIKVFHQQCAS--ALKSFEAECEVLKKIR 752
FAE NI+ G+G FG V + + A+KV ++ A + E E+LKK+
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 753 HRNLIKVISSCSNDDFKALVLEYMSNGSLGD 783
H N++K+ + +V E + G L D
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
>pdb|1H6T|A Chain A, Internalin B: Crystal Structure Of Fused N-Terminal
Domains
Length = 291
Score = 29.3 bits (64), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Query: 361 SLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNL 420
LE+L + N I+ +S L+ L TL LE N+++ + + L KLQ LYL+ N
Sbjct: 135 QLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIVPL--AGLTKLQNLYLSKN-- 188
Query: 421 VGSFPDELCHIGRLAELALLDN 442
HI L LA L N
Sbjct: 189 ---------HISDLRALAGLKN 201
>pdb|4AW4|A Chain A, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
pdb|4AW4|B Chain B, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
pdb|4AW4|C Chain C, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
Length = 311
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 15/82 (18%)
Query: 361 SLETLVIANCSISGNIPQAISNLSNLLTLVLERNKLTGPISITFGRLQKLQGLYLASNNL 420
LE+L + N I+ +S L+ L TL LE N+++ + L KLQ LYL+ N
Sbjct: 155 QLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISD--IVPLAGLTKLQNLYLSKN-- 208
Query: 421 VGSFPDELCHIGRLAELALLDN 442
HI L LA L N
Sbjct: 209 ---------HISDLRALAGLKN 221
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,603,265
Number of Sequences: 62578
Number of extensions: 738941
Number of successful extensions: 3353
Number of sequences better than 100.0: 739
Number of HSP's better than 100.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 487
Number of HSP's that attempted gapping in prelim test: 1986
Number of HSP's gapped (non-prelim): 1243
length of query: 790
length of database: 14,973,337
effective HSP length: 107
effective length of query: 683
effective length of database: 8,277,491
effective search space: 5653526353
effective search space used: 5653526353
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)